Query 011504
Match_columns 484
No_of_seqs 243 out of 1178
Neff 5.1
Searched_HMMs 46136
Date Fri Mar 29 02:05:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011504.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011504hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1605 TFIIF-interacting CTD 100.0 4.7E-48 1E-52 382.9 13.3 180 295-474 81-262 (262)
2 TIGR02251 HIF-SF_euk Dullard-l 100.0 2.5E-40 5.4E-45 306.2 16.8 161 303-463 1-162 (162)
3 PF03031 NIF: NLI interacting 100.0 2.3E-38 4.9E-43 288.3 15.4 158 304-465 1-159 (159)
4 TIGR02245 HAD_IIID1 HAD-superf 100.0 1.5E-36 3.3E-41 290.1 15.0 159 299-473 17-193 (195)
5 TIGR02250 FCP1_euk FCP1-like p 100.0 5.5E-31 1.2E-35 243.4 13.2 138 300-440 3-154 (156)
6 KOG2832 TFIIF-interacting CTD 100.0 2.4E-31 5.3E-36 270.4 9.3 160 298-473 184-345 (393)
7 COG5190 FCP1 TFIIF-interacting 100.0 1.3E-28 2.9E-33 255.3 8.6 179 295-474 204-384 (390)
8 smart00577 CPDc catalytic doma 99.9 3.1E-26 6.7E-31 208.3 14.4 145 302-446 1-148 (148)
9 KOG0323 TFIIF-interacting CTD 99.8 1.2E-18 2.5E-23 190.2 10.8 137 301-440 144-297 (635)
10 TIGR01685 MDP-1 magnesium-depe 98.5 2.9E-07 6.3E-12 87.2 8.3 138 304-441 3-158 (174)
11 TIGR01681 HAD-SF-IIIC HAD-supe 98.5 1.3E-07 2.8E-12 84.4 3.8 111 304-426 1-121 (128)
12 COG5190 FCP1 TFIIF-interacting 98.3 4.7E-07 1E-11 95.3 3.3 137 300-438 23-172 (390)
13 PRK14988 GMP/IMP nucleotidase; 98.2 4.5E-07 9.8E-12 88.0 2.4 93 342-435 92-188 (224)
14 PRK13288 pyrophosphatase PpaX; 98.2 5.5E-07 1.2E-11 85.5 2.7 96 342-438 81-180 (214)
15 TIGR01662 HAD-SF-IIIA HAD-supe 98.2 1.5E-06 3.4E-11 76.5 5.2 114 304-435 1-126 (132)
16 cd01427 HAD_like Haloacid deha 98.2 1.2E-06 2.6E-11 74.2 3.6 107 305-427 1-127 (139)
17 PRK13225 phosphoglycolate phos 98.1 1.1E-06 2.3E-11 88.4 1.7 95 342-437 141-236 (273)
18 COG4996 Predicted phosphatase 98.0 1.8E-05 3.9E-10 72.4 8.4 136 305-443 2-149 (164)
19 TIGR00338 serB phosphoserine p 98.0 1.8E-06 3.8E-11 82.1 1.8 97 342-440 84-194 (219)
20 TIGR01684 viral_ppase viral ph 98.0 1.7E-05 3.8E-10 81.0 7.9 123 300-445 123-281 (301)
21 PHA03398 viral phosphatase sup 98.0 3E-05 6.4E-10 79.4 9.4 123 300-445 125-283 (303)
22 PRK13226 phosphoglycolate phos 98.0 3.7E-06 8.1E-11 81.4 2.5 95 342-437 94-192 (229)
23 COG0637 Predicted phosphatase/ 97.9 2.6E-06 5.6E-11 82.8 0.9 99 342-441 85-187 (221)
24 TIGR00213 GmhB_yaeD D,D-heptos 97.9 1.4E-05 3E-10 74.6 5.6 115 304-436 2-146 (176)
25 TIGR01656 Histidinol-ppas hist 97.9 1.5E-05 3.2E-10 72.4 5.5 117 304-436 1-141 (147)
26 TIGR01686 FkbH FkbH-like domai 97.9 2.5E-05 5.4E-10 79.9 6.9 109 302-426 2-116 (320)
27 PHA02597 30.2 hypothetical pro 97.9 2.7E-06 5.9E-11 79.8 -0.4 96 342-439 73-173 (197)
28 PF12689 Acid_PPase: Acid Phos 97.8 5.3E-05 1.1E-09 71.8 7.8 114 303-426 3-137 (169)
29 TIGR01261 hisB_Nterm histidino 97.8 2.7E-05 5.9E-10 72.6 5.8 122 304-440 2-147 (161)
30 PRK08942 D,D-heptose 1,7-bisph 97.8 3.2E-05 6.9E-10 72.2 6.1 116 303-435 3-142 (181)
31 PRK10563 6-phosphogluconate ph 97.8 5E-06 1.1E-10 79.3 -0.2 95 342-439 87-185 (221)
32 PHA02530 pseT polynucleotide k 97.7 2.5E-05 5.4E-10 78.1 4.1 128 301-439 156-295 (300)
33 PLN02940 riboflavin kinase 97.7 7.4E-06 1.6E-10 86.1 -0.5 97 342-439 92-193 (382)
34 TIGR01549 HAD-SF-IA-v1 haloaci 97.7 1.3E-05 2.8E-10 71.9 1.0 82 342-426 63-147 (154)
35 TIGR01672 AphA HAD superfamily 97.6 0.0001 2.2E-09 73.3 5.8 133 300-437 60-208 (237)
36 TIGR01664 DNA-3'-Pase DNA 3'-p 97.5 0.00018 3.8E-09 67.4 6.6 107 303-423 13-137 (166)
37 PF13419 HAD_2: Haloacid dehal 97.5 9.6E-05 2.1E-09 65.7 4.0 95 340-435 74-172 (176)
38 TIGR01668 YqeG_hyp_ppase HAD s 97.4 0.00028 6.2E-09 65.8 5.9 110 301-439 23-135 (170)
39 TIGR01489 DKMTPPase-SF 2,3-dik 97.4 0.00021 4.5E-09 65.6 4.7 86 342-428 71-177 (188)
40 TIGR01509 HAD-SF-IA-v3 haloaci 97.4 0.0002 4.2E-09 65.3 4.3 92 342-435 84-179 (183)
41 PRK13582 thrH phosphoserine ph 97.3 6.7E-05 1.4E-09 70.5 0.9 94 342-436 67-167 (205)
42 PRK06769 hypothetical protein; 97.3 0.00018 4E-09 67.3 3.8 118 304-439 5-136 (173)
43 PLN03243 haloacid dehalogenase 97.3 0.0003 6.5E-09 70.3 5.0 98 342-440 108-209 (260)
44 PLN02770 haloacid dehalogenase 97.3 0.00039 8.4E-09 68.4 5.5 97 342-439 107-207 (248)
45 TIGR02253 CTE7 HAD superfamily 97.2 0.0003 6.4E-09 66.7 4.4 95 342-437 93-192 (221)
46 KOG3109 Haloacid dehalogenase- 97.2 0.00023 5E-09 70.1 3.5 90 342-433 99-198 (244)
47 PF05152 DUF705: Protein of un 97.2 0.0019 4.1E-08 65.9 10.0 123 300-445 119-277 (297)
48 TIGR01993 Pyr-5-nucltdase pyri 97.2 0.00022 4.8E-09 66.2 3.1 92 342-436 83-181 (184)
49 PRK05446 imidazole glycerol-ph 97.2 0.00073 1.6E-08 70.9 7.1 121 302-437 1-145 (354)
50 COG0546 Gph Predicted phosphat 97.2 0.00032 7E-09 67.7 3.9 95 342-437 88-186 (220)
51 TIGR01454 AHBA_synth_RP 3-amin 97.2 0.00039 8.4E-09 65.7 4.3 96 342-438 74-173 (205)
52 PRK11009 aphA acid phosphatase 97.1 0.0015 3.1E-08 65.1 8.1 131 300-436 60-207 (237)
53 TIGR01449 PGP_bact 2-phosphogl 97.1 0.00049 1.1E-08 64.7 4.4 97 342-439 84-184 (213)
54 TIGR01428 HAD_type_II 2-haloal 97.1 0.00053 1.1E-08 64.3 4.4 94 342-436 91-188 (198)
55 TIGR02254 YjjG/YfnB HAD superf 97.1 0.0005 1.1E-08 64.9 4.2 94 342-436 96-194 (224)
56 PLN02954 phosphoserine phospha 97.1 0.00032 6.9E-09 66.9 2.5 92 342-435 83-191 (224)
57 PRK09456 ?-D-glucose-1-phospha 97.0 0.0006 1.3E-08 64.4 3.9 101 342-442 83-187 (199)
58 TIGR02137 HSK-PSP phosphoserin 97.0 0.00054 1.2E-08 66.1 3.4 49 342-391 67-115 (203)
59 PRK10826 2-deoxyglucose-6-phos 97.0 0.00093 2E-08 64.0 4.8 101 342-443 91-195 (222)
60 TIGR01670 YrbI-phosphatas 3-de 96.9 0.00099 2.1E-08 61.2 4.5 112 304-435 2-114 (154)
61 PRK09449 dUMP phosphatase; Pro 96.9 0.00092 2E-08 63.7 4.5 93 342-435 94-191 (224)
62 TIGR02009 PGMB-YQAB-SF beta-ph 96.8 0.00081 1.7E-08 61.8 3.1 92 342-436 87-182 (185)
63 TIGR01689 EcbF-BcbF capsule bi 96.8 0.0029 6.2E-08 57.4 6.6 73 304-393 2-87 (126)
64 PLN02575 haloacid dehalogenase 96.8 0.0018 3.9E-08 68.6 5.9 98 342-440 215-316 (381)
65 TIGR01663 PNK-3'Pase polynucle 96.8 0.0021 4.6E-08 70.7 6.4 109 301-423 166-294 (526)
66 PRK11587 putative phosphatase; 96.8 0.0023 5.1E-08 61.2 6.0 97 342-440 82-182 (218)
67 PRK10725 fructose-1-P/6-phosph 96.8 0.001 2.2E-08 61.5 3.3 95 342-438 87-184 (188)
68 TIGR01422 phosphonatase phosph 96.7 0.0019 4.2E-08 63.1 4.9 98 342-439 98-200 (253)
69 PRK13222 phosphoglycolate phos 96.5 0.0034 7.4E-08 59.5 5.0 93 342-435 92-188 (226)
70 PRK11133 serB phosphoserine ph 96.5 0.0013 2.7E-08 68.2 1.9 95 342-437 180-288 (322)
71 TIGR01491 HAD-SF-IB-PSPlk HAD- 96.4 0.0061 1.3E-07 56.6 6.1 94 342-436 79-186 (201)
72 PRK13223 phosphoglycolate phos 96.4 0.004 8.6E-08 62.4 4.8 94 342-436 100-197 (272)
73 TIGR01459 HAD-SF-IIA-hyp4 HAD- 96.3 0.0066 1.4E-07 59.4 6.0 95 303-423 8-105 (242)
74 PRK09484 3-deoxy-D-manno-octul 96.3 0.0054 1.2E-07 58.0 5.1 115 302-437 20-136 (183)
75 PRK13478 phosphonoacetaldehyde 96.3 0.0062 1.3E-07 60.3 5.6 98 342-439 100-202 (267)
76 TIGR02247 HAD-1A3-hyp Epoxide 96.3 0.002 4.4E-08 60.9 2.0 98 342-440 93-196 (211)
77 TIGR03351 PhnX-like phosphonat 96.3 0.0033 7.2E-08 59.8 3.4 95 342-436 86-186 (220)
78 PLN02779 haloacid dehalogenase 96.3 0.0055 1.2E-07 62.0 5.1 98 342-440 143-246 (286)
79 COG1011 Predicted hydrolase (H 96.2 0.0086 1.9E-07 56.7 5.6 93 342-435 98-194 (229)
80 PRK08238 hypothetical protein; 96.2 0.0051 1.1E-07 67.0 4.5 48 342-393 71-119 (479)
81 TIGR02252 DREG-2 REG-2-like, H 96.1 0.0064 1.4E-07 57.1 4.5 91 343-435 105-200 (203)
82 TIGR01990 bPGM beta-phosphoglu 96.1 0.0045 9.8E-08 56.8 3.4 91 343-436 87-181 (185)
83 TIGR01533 lipo_e_P4 5'-nucleot 96.1 0.0052 1.1E-07 62.2 4.1 92 301-393 73-172 (266)
84 TIGR01691 enolase-ppase 2,3-di 96.1 0.0053 1.1E-07 60.3 3.8 95 342-437 94-193 (220)
85 TIGR01548 HAD-SF-IA-hyp1 haloa 96.0 0.015 3.4E-07 54.6 6.2 81 344-425 107-190 (197)
86 PLN02811 hydrolase 95.9 0.0077 1.7E-07 57.8 3.8 97 342-439 77-183 (220)
87 COG0560 SerB Phosphoserine pho 95.7 0.019 4.2E-07 56.0 5.7 84 342-426 76-173 (212)
88 PLN02919 haloacid dehalogenase 95.5 0.021 4.5E-07 67.8 6.4 97 344-440 162-262 (1057)
89 PRK06698 bifunctional 5'-methy 95.3 0.019 4E-07 61.7 4.6 92 342-436 329-423 (459)
90 PRK09552 mtnX 2-hydroxy-3-keto 95.3 0.046 1E-06 52.5 6.8 96 342-437 73-184 (219)
91 PF08645 PNK3P: Polynucleotide 95.0 0.036 7.7E-07 51.7 4.9 106 304-424 1-129 (159)
92 TIGR02726 phenyl_P_delta pheny 94.8 0.046 9.9E-07 51.7 5.2 115 303-438 7-123 (169)
93 PTZ00445 p36-lilke protein; Pr 94.8 0.042 9.1E-07 54.3 5.1 128 300-440 40-205 (219)
94 COG0561 Cof Predicted hydrolas 94.8 0.089 1.9E-06 51.7 7.3 58 303-383 3-61 (264)
95 PRK00192 mannosyl-3-phosphogly 94.7 0.077 1.7E-06 52.8 6.9 58 303-383 4-62 (273)
96 KOG2914 Predicted haloacid-hal 94.7 0.01 2.2E-07 58.7 0.5 101 341-441 90-197 (222)
97 TIGR01493 HAD-SF-IA-v2 Haloaci 94.7 0.011 2.3E-07 54.2 0.6 76 342-424 89-167 (175)
98 PF13344 Hydrolase_6: Haloacid 94.5 0.07 1.5E-06 46.0 5.2 50 306-379 1-51 (101)
99 PF08282 Hydrolase_3: haloacid 94.5 0.09 1.9E-06 49.4 6.4 54 306-382 1-55 (254)
100 TIGR03333 salvage_mtnX 2-hydro 94.2 0.096 2.1E-06 50.3 6.0 94 341-434 68-177 (214)
101 COG0241 HisB Histidinol phosph 94.1 0.084 1.8E-06 50.8 5.3 126 303-442 5-154 (181)
102 PRK03669 mannosyl-3-phosphogly 94.0 0.16 3.5E-06 50.5 7.3 59 301-382 5-64 (271)
103 COG2179 Predicted hydrolase of 94.0 0.063 1.4E-06 51.2 4.0 132 295-457 20-156 (175)
104 TIGR01544 HAD-SF-IE haloacid d 93.8 0.14 3.1E-06 52.3 6.6 105 341-446 119-248 (277)
105 TIGR01487 SPP-like sucrose-pho 93.8 0.17 3.7E-06 48.3 6.7 57 304-383 2-59 (215)
106 PRK10513 sugar phosphate phosp 93.6 0.19 4E-06 49.4 6.9 57 303-382 3-60 (270)
107 TIGR02461 osmo_MPG_phos mannos 93.4 0.19 4.1E-06 49.2 6.4 53 306-382 2-55 (225)
108 PF09419 PGP_phosphatase: Mito 93.3 0.23 5E-06 47.3 6.7 96 299-424 37-147 (168)
109 PRK10530 pyridoxal phosphate ( 93.3 0.25 5.4E-06 48.3 7.2 58 303-383 3-61 (272)
110 PF06941 NT5C: 5' nucleotidase 93.3 0.021 4.6E-07 54.0 -0.3 79 342-436 72-158 (191)
111 TIGR02463 MPGP_rel mannosyl-3- 93.1 0.25 5.5E-06 47.1 6.8 54 306-382 2-56 (221)
112 COG3882 FkbH Predicted enzyme 93.1 0.15 3.2E-06 55.8 5.6 129 300-442 219-357 (574)
113 PRK01158 phosphoglycolate phos 93.0 0.33 7.1E-06 46.3 7.4 57 304-383 4-61 (230)
114 TIGR00099 Cof-subfamily Cof su 93.0 0.22 4.7E-06 48.7 6.3 55 305-382 1-56 (256)
115 smart00775 LNS2 LNS2 domain. T 92.6 0.29 6.3E-06 45.5 6.1 61 306-379 2-67 (157)
116 PRK15126 thiamin pyrimidine py 92.5 0.33 7.1E-06 48.0 6.8 57 304-383 3-60 (272)
117 PRK10976 putative hydrolase; P 92.5 0.33 7.2E-06 47.6 6.8 57 304-383 3-60 (266)
118 TIGR01488 HAD-SF-IB Haloacid D 92.3 0.46 9.9E-06 43.2 7.0 49 342-391 72-121 (177)
119 TIGR01486 HAD-SF-IIB-MPGP mann 91.8 0.38 8.3E-06 47.3 6.3 55 305-382 1-56 (256)
120 PRK10748 flavin mononucleotide 91.6 0.13 2.7E-06 50.3 2.6 89 342-436 112-204 (238)
121 TIGR01456 CECR5 HAD-superfamil 91.6 0.31 6.6E-06 50.2 5.5 53 304-380 1-62 (321)
122 PRK10444 UMP phosphatase; Prov 91.4 0.3 6.4E-06 48.7 5.1 53 304-380 2-55 (248)
123 TIGR01484 HAD-SF-IIB HAD-super 91.1 0.43 9.3E-06 44.9 5.6 54 305-380 1-55 (204)
124 PF11019 DUF2608: Protein of u 90.9 0.18 3.9E-06 50.6 3.0 100 342-441 80-210 (252)
125 TIGR01482 SPP-subfamily Sucros 90.8 0.59 1.3E-05 44.3 6.4 53 306-381 1-54 (225)
126 PF06888 Put_Phosphatase: Puta 90.3 0.4 8.6E-06 47.9 4.8 49 342-391 70-121 (234)
127 PTZ00174 phosphomannomutase; P 90.3 0.72 1.6E-05 45.4 6.5 52 303-377 5-57 (247)
128 TIGR01458 HAD-SF-IIA-hyp3 HAD- 90.0 0.37 8E-06 48.0 4.3 47 304-370 2-49 (257)
129 COG4502 5'(3')-deoxyribonucleo 89.6 0.63 1.4E-05 43.7 5.2 85 342-441 67-155 (180)
130 PLN02645 phosphoglycolate phos 89.5 0.47 1E-05 48.6 4.7 53 303-379 28-81 (311)
131 PRK12702 mannosyl-3-phosphogly 89.5 0.94 2E-05 47.0 6.8 57 304-383 2-59 (302)
132 TIGR01490 HAD-SF-IB-hyp1 HAD-s 89.4 0.55 1.2E-05 43.9 4.8 84 342-426 86-184 (202)
133 PRK10187 trehalose-6-phosphate 89.2 0.84 1.8E-05 45.8 6.2 60 303-380 14-75 (266)
134 TIGR01452 PGP_euk phosphoglyco 88.9 0.6 1.3E-05 46.8 4.9 41 304-368 3-44 (279)
135 PLN02423 phosphomannomutase 87.7 1.2 2.6E-05 44.2 6.0 55 301-381 5-59 (245)
136 TIGR02244 HAD-IG-Ncltidse HAD 86.6 1.4 3.1E-05 46.4 6.2 53 339-391 180-240 (343)
137 PRK14502 bifunctional mannosyl 86.4 2.4 5.2E-05 48.5 8.2 60 300-382 413-473 (694)
138 TIGR01457 HAD-SF-IIA-hyp2 HAD- 86.4 1.1 2.4E-05 44.3 5.1 53 305-381 3-59 (249)
139 PLN02887 hydrolase family prot 85.8 1.8 3.9E-05 48.6 6.9 58 302-382 307-365 (580)
140 TIGR01485 SPP_plant-cyano sucr 85.6 1.5 3.2E-05 43.0 5.5 60 303-382 1-61 (249)
141 COG0647 NagD Predicted sugar p 83.9 1.4 3E-05 45.0 4.5 52 303-378 8-60 (269)
142 TIGR01460 HAD-SF-IIA Haloacid 83.5 1.4 3.1E-05 43.2 4.3 51 306-380 1-56 (236)
143 TIGR01675 plant-AP plant acid 83.3 1.6 3.4E-05 43.6 4.5 92 300-393 74-172 (229)
144 COG2503 Predicted secreted aci 82.3 1.5 3.3E-05 44.4 4.0 75 300-380 76-161 (274)
145 PLN03017 trehalose-phosphatase 81.0 2.7 5.9E-05 44.8 5.5 60 300-377 108-167 (366)
146 COG4359 Uncharacterized conser 80.2 4.3 9.2E-05 39.8 6.0 41 342-382 72-113 (220)
147 TIGR01511 ATPase-IB1_Cu copper 80.0 3.4 7.4E-05 46.0 6.1 86 341-436 403-489 (562)
148 TIGR00685 T6PP trehalose-phosp 79.6 1.7 3.8E-05 42.7 3.3 48 302-367 2-51 (244)
149 PF00702 Hydrolase: haloacid d 79.6 2.1 4.5E-05 39.7 3.7 79 341-423 125-205 (215)
150 PRK10725 fructose-1-P/6-phosph 78.6 1.2 2.6E-05 41.0 1.8 16 303-318 5-20 (188)
151 PLN02151 trehalose-phosphatase 78.5 4 8.7E-05 43.3 5.8 60 300-377 95-154 (354)
152 KOG3120 Predicted haloacid deh 78.4 1.1 2.4E-05 44.8 1.5 41 342-382 83-125 (256)
153 PRK11587 putative phosphatase; 78.1 1.2 2.5E-05 42.7 1.5 16 303-318 3-18 (218)
154 COG1877 OtsB Trehalose-6-phosp 78.0 3.9 8.5E-05 41.7 5.3 61 299-377 14-76 (266)
155 PLN02580 trehalose-phosphatase 76.6 4.8 0.00011 43.1 5.8 61 300-378 116-176 (384)
156 PF03767 Acid_phosphat_B: HAD 75.7 2.6 5.6E-05 41.7 3.3 69 301-375 70-148 (229)
157 TIGR01548 HAD-SF-IA-hyp1 haloa 74.8 1.4 2.9E-05 41.5 1.0 14 305-318 2-15 (197)
158 PRK11590 hypothetical protein; 73.5 1.9 4.1E-05 41.4 1.7 39 342-380 94-134 (211)
159 TIGR01993 Pyr-5-nucltdase pyri 72.9 1.9 4.2E-05 39.8 1.5 14 305-318 2-15 (184)
160 TIGR02253 CTE7 HAD superfamily 71.8 2.2 4.7E-05 40.3 1.7 15 304-318 3-17 (221)
161 TIGR03351 PhnX-like phosphonat 71.3 2.1 4.6E-05 40.6 1.5 15 304-318 2-16 (220)
162 TIGR01525 ATPase-IB_hvy heavy 71.3 6.3 0.00014 43.7 5.3 87 341-436 382-470 (556)
163 TIGR02009 PGMB-YQAB-SF beta-ph 70.7 2.1 4.7E-05 39.1 1.3 15 304-318 2-16 (185)
164 PLN03243 haloacid dehalogenase 70.1 2.7 5.8E-05 42.2 1.9 20 299-318 20-39 (260)
165 TIGR01422 phosphonatase phosph 69.7 2.6 5.7E-05 41.2 1.7 15 304-318 3-17 (253)
166 KOG3085 Predicted hydrolase (H 69.5 2.2 4.7E-05 42.9 1.1 92 340-434 111-207 (237)
167 PRK11590 hypothetical protein; 69.5 7.3 0.00016 37.3 4.7 17 302-318 5-21 (211)
168 PRK13223 phosphoglycolate phos 69.2 2.8 6E-05 42.1 1.8 16 303-318 13-28 (272)
169 PLN02770 haloacid dehalogenase 68.9 2.7 5.8E-05 41.4 1.6 16 303-318 22-37 (248)
170 TIGR02252 DREG-2 REG-2-like, H 68.8 2.4 5.3E-05 39.6 1.2 14 305-318 2-15 (203)
171 PRK13478 phosphonoacetaldehyde 68.7 2.6 5.7E-05 41.7 1.5 16 303-318 4-19 (267)
172 PRK10748 flavin mononucleotide 67.6 3 6.5E-05 40.7 1.7 16 303-318 10-25 (238)
173 PRK14501 putative bifunctional 66.3 10 0.00022 43.6 5.7 62 300-379 489-552 (726)
174 TIGR01454 AHBA_synth_RP 3-amin 65.7 2.4 5.2E-05 39.9 0.5 13 306-318 1-13 (205)
175 TIGR01512 ATPase-IB2_Cd heavy 65.3 5.5 0.00012 44.0 3.3 87 341-436 360-448 (536)
176 TIGR01990 bPGM beta-phosphoglu 65.1 3 6.6E-05 38.1 1.1 14 305-318 1-14 (185)
177 PF05116 S6PP: Sucrose-6F-phos 64.9 9.8 0.00021 37.8 4.7 55 302-380 1-57 (247)
178 COG3769 Predicted hydrolase (H 64.5 20 0.00044 36.3 6.6 59 303-385 7-66 (274)
179 TIGR01545 YfhB_g-proteo haloac 64.1 16 0.00034 35.4 5.9 38 342-379 93-132 (210)
180 PRK10826 2-deoxyglucose-6-phos 64.0 4.1 8.8E-05 38.9 1.8 17 302-318 6-22 (222)
181 TIGR01449 PGP_bact 2-phosphogl 63.4 2.8 6.1E-05 39.3 0.6 13 306-318 1-13 (213)
182 PLN02779 haloacid dehalogenase 62.8 4.1 8.8E-05 41.3 1.6 17 302-318 39-55 (286)
183 TIGR02254 YjjG/YfnB HAD superf 62.7 3.8 8.2E-05 38.5 1.3 15 304-318 2-16 (224)
184 TIGR01491 HAD-SF-IB-PSPlk HAD- 62.3 4.5 9.8E-05 37.4 1.7 16 303-318 4-19 (201)
185 TIGR01493 HAD-SF-IA-v2 Haloaci 62.2 3.7 8.1E-05 37.4 1.1 13 306-318 2-14 (175)
186 PRK09449 dUMP phosphatase; Pro 62.1 3.9 8.4E-05 38.9 1.2 14 304-317 4-17 (224)
187 TIGR01428 HAD_type_II 2-haloal 62.1 4 8.7E-05 38.1 1.3 15 304-318 2-16 (198)
188 TIGR02247 HAD-1A3-hyp Epoxide 61.8 4.5 9.7E-05 38.2 1.6 15 304-318 3-17 (211)
189 TIGR02471 sucr_syn_bact_C sucr 61.5 12 0.00025 36.3 4.4 54 305-382 1-54 (236)
190 PRK13222 phosphoglycolate phos 61.4 4.1 8.9E-05 38.5 1.3 16 303-318 6-21 (226)
191 TIGR01680 Veg_Stor_Prot vegeta 59.7 16 0.00035 37.6 5.2 90 302-393 100-197 (275)
192 PF13419 HAD_2: Haloacid dehal 58.8 4.6 0.0001 35.5 1.0 13 306-318 1-13 (176)
193 TIGR01509 HAD-SF-IA-v3 haloaci 56.0 5.1 0.00011 36.2 0.9 13 306-318 2-14 (183)
194 PF12710 HAD: haloacid dehalog 55.7 11 0.00024 34.4 3.1 47 344-390 86-138 (192)
195 PF08235 LNS2: LNS2 (Lipin/Ned 53.5 36 0.00077 32.3 6.0 62 306-379 2-64 (157)
196 PRK06698 bifunctional 5'-methy 49.9 6.5 0.00014 42.4 0.6 16 303-318 241-256 (459)
197 PLN02575 haloacid dehalogenase 49.8 7.7 0.00017 41.6 1.1 18 301-318 129-146 (381)
198 PLN02205 alpha,alpha-trehalose 45.4 37 0.00081 40.1 5.9 60 300-379 593-654 (854)
199 PF08484 Methyltransf_14: C-me 45.0 61 0.0013 30.5 6.2 67 343-440 52-120 (160)
200 PRK09552 mtnX 2-hydroxy-3-keto 44.6 12 0.00026 35.9 1.4 16 303-318 3-18 (219)
201 PF02358 Trehalose_PPase: Treh 43.4 34 0.00074 33.2 4.5 50 307-374 1-52 (235)
202 PLN03063 alpha,alpha-trehalose 42.6 43 0.00094 39.2 5.8 64 300-378 504-569 (797)
203 PF05822 UMPH-1: Pyrimidine 5' 42.1 29 0.00063 35.2 3.8 100 341-440 88-211 (246)
204 COG1011 Predicted hydrolase (H 41.7 16 0.00034 34.5 1.8 16 303-318 4-19 (229)
205 PLN02382 probable sucrose-phos 41.7 67 0.0015 34.6 6.7 17 301-317 7-23 (413)
206 TIGR01545 YfhB_g-proteo haloac 41.3 14 0.00031 35.7 1.5 16 303-318 5-20 (210)
207 PRK09456 ?-D-glucose-1-phospha 40.7 15 0.00033 34.5 1.5 14 305-318 2-15 (199)
208 KOG2134 Polynucleotide kinase 39.2 47 0.001 36.0 4.9 58 301-368 73-130 (422)
209 TIGR02826 RNR_activ_nrdG3 anae 38.2 75 0.0016 29.4 5.6 71 331-421 65-137 (147)
210 PLN03064 alpha,alpha-trehalose 33.0 83 0.0018 37.8 6.1 71 300-379 588-660 (934)
211 PRK10671 copA copper exporting 31.3 43 0.00093 39.1 3.5 85 343-436 650-735 (834)
212 PF05761 5_nucleotid: 5' nucle 30.4 95 0.0021 34.1 5.7 53 339-391 179-240 (448)
213 TIGR01488 HAD-SF-IB Haloacid D 29.8 25 0.00053 31.8 1.0 13 306-318 2-14 (177)
214 PF12710 HAD: haloacid dehalog 29.8 29 0.00062 31.6 1.4 13 306-318 1-13 (192)
215 PLN02177 glycerol-3-phosphate 28.5 46 0.00099 37.0 2.9 23 360-382 124-147 (497)
216 TIGR01490 HAD-SF-IB-hyp1 HAD-s 27.6 30 0.00064 32.2 1.1 13 306-318 2-14 (202)
217 PLN02919 haloacid dehalogenase 26.7 36 0.00078 41.1 1.9 18 301-318 73-90 (1057)
218 cd02514 GT13_GLCNAC-TI GT13_GL 25.3 67 0.0015 33.9 3.3 40 340-379 6-52 (334)
219 cd06537 CIDE_N_B CIDE_N domain 22.3 1.3E+02 0.0028 25.7 3.9 16 303-318 39-54 (81)
220 cd06539 CIDE_N_A CIDE_N domain 21.1 1.4E+02 0.0031 25.3 3.8 15 303-317 40-54 (78)
221 KOG3189 Phosphomannomutase [Li 20.8 1.4E+02 0.0031 29.9 4.4 58 300-380 8-70 (252)
No 1
>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=100.00 E-value=4.7e-48 Score=382.87 Aligned_cols=180 Identities=58% Similarity=0.964 Sum_probs=172.7
Q ss_pred CCccCCCCceEEEEeccccccccc--ccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhhcceEEEEEcCCcHHHH
Q 011504 295 PKETQGRKSVTLVLDLDETLVHST--LEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYA 372 (484)
Q Consensus 295 P~~~~~~kK~tLVLDLDeTLVhSs--~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Lsk~YEIvIfTAs~~~YA 372 (484)
|......+|++||||||||||||+ .++...++|.+++.+++..+.+||.+|||+++||+.++++||++||||+.+.||
T Consensus 81 ~~~~~~~~kk~lVLDLDeTLvHss~~~~~~~~~d~~~~v~~~~~~~~~yV~kRP~vdeFL~~~s~~~e~v~FTAs~~~Ya 160 (262)
T KOG1605|consen 81 PLRLATVGRKTLVLDLDETLVHSSLNLKPIVNADFTVPVEIDGHIHQVYVRKRPHVDEFLSRVSKWYELVLFTASLEVYA 160 (262)
T ss_pred CcccccCCCceEEEeCCCcccccccccCCCCCcceeeeeeeCCcceEEEEEcCCCHHHHHHHhHHHHHHHHHHhhhHHHH
Confidence 344457889999999999999999 777789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCceeEEEeecceeeeCCcccccccccCCCCCcEEEEECCchhhccCCCceeeeccccCCCCchHHHHHH
Q 011504 373 AQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWFDDPSDCSLISLL 452 (484)
Q Consensus 373 d~ILd~LDP~~~lfs~rL~Re~C~~~~g~yiKDLs~LGrDlskVIIIDDsp~s~~~qp~NgIpI~sw~~d~~D~eLl~Ll 452 (484)
.+|++.||+.+++|++|+||++|.+.+|+|+|||+.+|+++++||||||+|.+|.+||+|||||++|++++.|+||++|+
T Consensus 161 ~~v~D~LD~~~~i~~~RlyR~~C~~~~g~yvKdls~~~~dL~~viIiDNsP~sy~~~p~NgIpI~sw~~d~~D~eLL~Ll 240 (262)
T KOG1605|consen 161 DPLLDILDPDRKIISHRLYRDSCTLKDGNYVKDLSVLGRDLSKVIIVDNSPQSYRLQPENGIPIKSWFDDPTDTELLKLL 240 (262)
T ss_pred HHHHHHccCCCCeeeeeecccceEeECCcEEEEcceeccCcccEEEEcCChHHhccCccCCCcccccccCCChHHHHHHH
Confidence 99999999988899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCcHHHHHhHhCC
Q 011504 453 PFLDILADAEDVRPIIAKTFGS 474 (484)
Q Consensus 453 pfLe~L~~~~DVR~iL~k~f~~ 474 (484)
|||+.|+.++|||++|+++||.
T Consensus 241 pfLe~L~~~~Dvr~~l~~~~~~ 262 (262)
T KOG1605|consen 241 PFLEALAFVDDVRPILARRFGN 262 (262)
T ss_pred HHHHHhcccccHHHHHHHhhcC
Confidence 9999999999999999999874
No 2
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=100.00 E-value=2.5e-40 Score=306.17 Aligned_cols=161 Identities=57% Similarity=0.931 Sum_probs=153.7
Q ss_pred ceEEEEecccccccccccccC-CCCceEEEEeccccceeeeeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhCC
Q 011504 303 SVTLVLDLDETLVHSTLEYCD-DADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDP 381 (484)
Q Consensus 303 K~tLVLDLDeTLVhSs~~~~~-~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Lsk~YEIvIfTAs~~~YAd~ILd~LDP 381 (484)
|+||||||||||||+++.+.. .++|.+.+..++....+||++|||+.+||++|+++|||+|||++.+.||++|+++|||
T Consensus 1 k~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~~yei~I~Ts~~~~yA~~il~~ldp 80 (162)
T TIGR02251 1 KKTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSKWYELVIFTASLEEYADPVLDILDR 80 (162)
T ss_pred CcEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHHHhcCEEEEEcCCcHHHHHHHHHHHCc
Confidence 579999999999999988765 6788888888888889999999999999999999999999999999999999999999
Q ss_pred CCCceeEEEeecceeeeCCcccccccccCCCCCcEEEEECCchhhccCCCceeeeccccCCCCchHHHHHHHHHHhccCC
Q 011504 382 DGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWFDDPSDCSLISLLPFLDILADA 461 (484)
Q Consensus 382 ~~~lfs~rL~Re~C~~~~g~yiKDLs~LGrDlskVIIIDDsp~s~~~qp~NgIpI~sw~~d~~D~eLl~LlpfLe~L~~~ 461 (484)
.+.+|.++++|++|....+.|.|||+.+|+++++||||||++..|..|++|||+|.+|.|+.+|++|++|++||+.|+.+
T Consensus 81 ~~~~f~~~l~r~~~~~~~~~~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~~f~~~~~D~~L~~l~~~L~~l~~~ 160 (162)
T TIGR02251 81 GGKVISRRLYRESCVFTNGKYVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIKSWFGDPNDTELLNLIPFLEGLRFE 160 (162)
T ss_pred CCCEEeEEEEccccEEeCCCEEeEchhcCCChhhEEEEeCChhhhccCccCEeecCCCCCCCCHHHHHHHHHHHHHHhcc
Confidence 98899999999999998889999999999999999999999999999999999999999999999999999999999988
Q ss_pred CC
Q 011504 462 ED 463 (484)
Q Consensus 462 ~D 463 (484)
+|
T Consensus 161 ~~ 162 (162)
T TIGR02251 161 DD 162 (162)
T ss_pred CC
Confidence 76
No 3
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=100.00 E-value=2.3e-38 Score=288.26 Aligned_cols=158 Identities=51% Similarity=0.856 Sum_probs=130.6
Q ss_pred eEEEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhCCCC
Q 011504 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDG 383 (484)
Q Consensus 304 ~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Lsk~YEIvIfTAs~~~YAd~ILd~LDP~~ 383 (484)
|||||||||||||+........++... . ....++|++|||+++||++++++|||+|||++.+.||++|++.|+|.+
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~---~-~~~~~~v~~RP~l~~FL~~l~~~~ev~i~T~~~~~ya~~v~~~ldp~~ 76 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKII---D-QRGGYYVKLRPGLDEFLEELSKHYEVVIWTSASEEYAEPVLDALDPNG 76 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEE---T-EEEEEEEEE-TTHHHHHHHHHHHCEEEEE-SS-HHHHHHHHHHHTTTT
T ss_pred CEEEEeCCCcEEEEeecCCCCccccee---c-cccceeEeeCchHHHHHHHHHHhceEEEEEeehhhhhhHHHHhhhhhc
Confidence 699999999999998765544444322 2 556789999999999999999999999999999999999999999988
Q ss_pred CceeEEEeecceeeeCCcccccccccCCCCCcEEEEECCchhhccCCCceeeeccccCC-CCchHHHHHHHHHHhccCCC
Q 011504 384 KLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWFDD-PSDCSLISLLPFLDILADAE 462 (484)
Q Consensus 384 ~lfs~rL~Re~C~~~~g~yiKDLs~LGrDlskVIIIDDsp~s~~~qp~NgIpI~sw~~d-~~D~eLl~LlpfLe~L~~~~ 462 (484)
.+|.++++|++|....|.++|||+++|+++++||||||++.+|..+++|+|+|++|.++ +.|++|.+|++||++|+.++
T Consensus 77 ~~~~~~~~r~~~~~~~~~~~KdL~~l~~~~~~vvivDD~~~~~~~~~~N~i~v~~f~~~~~~D~~L~~l~~~L~~l~~~~ 156 (159)
T PF03031_consen 77 KLFSRRLYRDDCTFDKGSYIKDLSKLGRDLDNVVIVDDSPRKWALQPDNGIPVPPFFGDTPNDRELLRLLPFLEELAKED 156 (159)
T ss_dssp SSEEEEEEGGGSEEETTEEE--GGGSSS-GGGEEEEES-GGGGTTSGGGEEE----SSCHTT--HHHHHHHHHHHHHTHS
T ss_pred cccccccccccccccccccccchHHHhhccccEEEEeCCHHHeeccCCceEEeccccCCCcchhHHHHHHHHHHHhCccc
Confidence 89999999999998888889999999999999999999999999999999999999999 99999999999999999999
Q ss_pred CcH
Q 011504 463 DVR 465 (484)
Q Consensus 463 DVR 465 (484)
|||
T Consensus 157 Dvr 159 (159)
T PF03031_consen 157 DVR 159 (159)
T ss_dssp -CH
T ss_pred CCC
Confidence 998
No 4
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=100.00 E-value=1.5e-36 Score=290.10 Aligned_cols=159 Identities=23% Similarity=0.279 Sum_probs=136.9
Q ss_pred CCCCceEEEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHHH
Q 011504 299 QGRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDI 378 (484)
Q Consensus 299 ~~~kK~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Lsk~YEIvIfTAs~~~YAd~ILd~ 378 (484)
...+|+||||||||||||+.+. ...+++.+|||+++||++++++|||+||||+++.||+.+++.
T Consensus 17 ~~~~kklLVLDLDeTLvh~~~~----------------~~~~~~~kRP~l~eFL~~~~~~feIvVwTAa~~~ya~~~l~~ 80 (195)
T TIGR02245 17 PREGKKLLVLDIDYTLFDHRSP----------------AETGEELMRPYLHEFLTSAYEDYDIVIWSATSMKWIEIKMTE 80 (195)
T ss_pred CCCCCcEEEEeCCCceEccccc----------------CCCceEEeCCCHHHHHHHHHhCCEEEEEecCCHHHHHHHHHH
Confidence 3577899999999999997421 124678999999999999999999999999999999999999
Q ss_pred hCCCC-CceeEEEeeccee------eeCCc-ccccccccC------CCCCcEEEEECCchhhccCCCceeeeccccC---
Q 011504 379 LDPDG-KLISRRVYRESCI------FSDGT-YTKDLTVLG------VDLAKVAIIDNSPQVFRLQVNNGIPIESWFD--- 441 (484)
Q Consensus 379 LDP~~-~lfs~rL~Re~C~------~~~g~-yiKDLs~LG------rDlskVIIIDDsp~s~~~qp~NgIpI~sw~~--- 441 (484)
|++.+ ..+..++++++|. ...|. ++|||+.++ +++++||||||+|.++.+||+|||+|++|++
T Consensus 81 l~~~~~~~~~i~~~ld~~~~~~~~~~~~g~~~vKdL~~lw~~l~~~~~~~ntiiVDd~p~~~~~~P~N~i~I~~f~~~~~ 160 (195)
T TIGR02245 81 LGVLTNPNYKITFLLDSTAMITVHTPRRGKFDVKPLGVIWALLPEFYSMKNTIMFDDLRRNFLMNPQNGLKIRPFKKAHA 160 (195)
T ss_pred hcccCCccceEEEEeccccceeeEeeccCcEEEeecHHhhhhcccCCCcccEEEEeCCHHHHhcCCCCccccCCccccCC
Confidence 98643 2355666778883 22454 599999873 3889999999999999999999999999995
Q ss_pred -CCCchHHHHHHHHHHhccCCCCcHHHHHhHhC
Q 011504 442 -DPSDCSLISLLPFLDILADAEDVRPIIAKTFG 473 (484)
Q Consensus 442 -d~~D~eLl~LlpfLe~L~~~~DVR~iL~k~f~ 473 (484)
+..|+||+.|+|||+.|+.++|||++++++|.
T Consensus 161 ~~~~D~eL~~L~~yL~~la~~~Dvr~~~~~~w~ 193 (195)
T TIGR02245 161 NRGTDQELLKLTQYLKTIAELEDFSSLDHKEWE 193 (195)
T ss_pred CCcccHHHHHHHHHHHHHhcCcccchhhhcccc
Confidence 57999999999999999999999999999884
No 5
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=99.97 E-value=5.5e-31 Score=243.35 Aligned_cols=138 Identities=31% Similarity=0.449 Sum_probs=117.8
Q ss_pred CCCceEEEEecccccccccccccCCCCce------------EEEEeccccceeeeeeCchHHHHHHHhhcceEEEEEcCC
Q 011504 300 GRKSVTLVLDLDETLVHSTLEYCDDADFT------------FTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTAS 367 (484)
Q Consensus 300 ~~kK~tLVLDLDeTLVhSs~~~~~~~Df~------------~~v~~~~~~~~v~V~lRPgL~eFLe~Lsk~YEIvIfTAs 367 (484)
.++|++||||||||||||+..+....... -...|......+++++|||+.+||+++++.|+++|||++
T Consensus 3 ~~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~~~yel~I~T~~ 82 (156)
T TIGR02250 3 REKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEASKLYEMHVYTMG 82 (156)
T ss_pred cCCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHHhhcEEEEEeCC
Confidence 57899999999999999987654322111 012233335678999999999999999999999999999
Q ss_pred cHHHHHHHHHHhCCCCCceeEE-EeecceeeeCCccccccc-ccCCCCCcEEEEECCchhhccCCCceeeecccc
Q 011504 368 QSIYAAQLLDILDPDGKLISRR-VYRESCIFSDGTYTKDLT-VLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWF 440 (484)
Q Consensus 368 ~~~YAd~ILd~LDP~~~lfs~r-L~Re~C~~~~g~yiKDLs-~LGrDlskVIIIDDsp~s~~~qp~NgIpI~sw~ 440 (484)
.+.||+++++.|||.+.+|.+| ++|++|. |.++|||+ .+|+++++||||||++.+|..||+|+|+|++|.
T Consensus 83 ~~~yA~~vl~~ldp~~~~F~~ri~~rd~~~---~~~~KdL~~i~~~d~~~vvivDd~~~~~~~~~~N~i~i~~~~ 154 (156)
T TIGR02250 83 TRAYAQAIAKLIDPDGKYFGDRIISRDESG---SPHTKSLLRLFPADESMVVIIDDREDVWPWHKRNLIQIEPYN 154 (156)
T ss_pred cHHHHHHHHHHhCcCCCeeccEEEEeccCC---CCccccHHHHcCCCcccEEEEeCCHHHhhcCccCEEEeCCcc
Confidence 9999999999999998899666 5699995 78999995 569999999999999999999999999999995
No 6
>KOG2832 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=99.97 E-value=2.4e-31 Score=270.38 Aligned_cols=160 Identities=36% Similarity=0.643 Sum_probs=150.6
Q ss_pred cCCCCceEEEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHH
Q 011504 298 TQGRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLD 377 (484)
Q Consensus 298 ~~~~kK~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Lsk~YEIvIfTAs~~~YAd~ILd 377 (484)
+..++++||||+|.++|||..|.. ..+|.+++|||++.||..++++|||||||+...-||.+|++
T Consensus 184 Py~Qp~yTLVleledvLVhpdws~---------------~tGwRf~kRPgvD~FL~~~a~~yEIVi~sse~gmt~~pl~d 248 (393)
T KOG2832|consen 184 PYEQPPYTLVLELEDVLVHPDWSY---------------KTGWRFKKRPGVDYFLGHLAKYYEIVVYSSEQGMTVFPLLD 248 (393)
T ss_pred cccCCCceEEEEeeeeEeccchhh---------------hcCceeccCchHHHHHHhhcccceEEEEecCCccchhhhHh
Confidence 456789999999999999998763 36789999999999999999999999999999999999999
Q ss_pred HhCCCCCceeEEEeecceeeeCCcccccccccCCCCCcEEEEECCchhhccCCCceeeeccccCCCCchHHHHHHHHHHh
Q 011504 378 ILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWFDDPSDCSLISLLPFLDI 457 (484)
Q Consensus 378 ~LDP~~~lfs~rL~Re~C~~~~g~yiKDLs~LGrDlskVIIIDDsp~s~~~qp~NgIpI~sw~~d~~D~eLl~LlpfLe~ 457 (484)
.|||+| +|+++|||++|.+.+|..+|||+.|+||+++||+||-.+.++.+||+|.|++++|.|+.+|+.|++|++||+.
T Consensus 249 ~lDP~g-~IsYkLfr~~t~y~~G~HvKdls~LNRdl~kVivVd~d~~~~~l~P~N~l~l~~W~Gn~dDt~L~dL~~FL~~ 327 (393)
T KOG2832|consen 249 ALDPKG-YISYKLFRGATKYEEGHHVKDLSKLNRDLQKVIVVDFDANSYKLQPENMLPLEPWSGNDDDTSLFDLLAFLEY 327 (393)
T ss_pred hcCCcc-eEEEEEecCcccccCccchhhhhhhccccceeEEEEccccccccCcccccccCcCCCCcccchhhhHHHHHHH
Confidence 999997 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccC--CCCcHHHHHhHhC
Q 011504 458 LAD--AEDVRPIIAKTFG 473 (484)
Q Consensus 458 L~~--~~DVR~iL~k~f~ 473 (484)
|+. ++|||++|+.+-+
T Consensus 328 ia~~~~eDvR~vL~~y~~ 345 (393)
T KOG2832|consen 328 IAQQQVEDVRPVLQSYSQ 345 (393)
T ss_pred HHHccHHHHHHHHHHhcc
Confidence 985 7999999975433
No 7
>COG5190 FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=99.95 E-value=1.3e-28 Score=255.27 Aligned_cols=179 Identities=45% Similarity=0.734 Sum_probs=167.7
Q ss_pred CCccCCCCceEEEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhhcceEEEEEcCCcHHHHHH
Q 011504 295 PKETQGRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQ 374 (484)
Q Consensus 295 P~~~~~~kK~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Lsk~YEIvIfTAs~~~YAd~ 374 (484)
|......++++|++|||+||+|+....+...+|...+......+.+||.+||++++||..++++|++++||++.+.||++
T Consensus 204 ~~~~~~~~~k~L~l~lde~l~~S~~~~~~~~df~~~~e~~~~~~~~~v~kRp~l~~fl~~ls~~~~l~~ft~s~~~y~~~ 283 (390)
T COG5190 204 PVSKSTSPKKTLVLDLDETLVHSSFRYITLLDFLVKVEISLLQHLVYVSKRPELDYFLGKLSKIHELVYFTASVKRYADP 283 (390)
T ss_pred hhhcCCCCccccccCCCccceeeccccccccchhhccccccceeEEEEcCChHHHHHHhhhhhhEEEEEEecchhhhcch
Confidence 34445677889999999999999998888888888887777789999999999999999999999999999999999999
Q ss_pred HHHHhCCCCCceeEEEeecceeeeCCcccccccccCCCCCcEEEEECCchhhccCCCceeeeccccCCCCchHHHHHHHH
Q 011504 375 LLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWFDDPSDCSLISLLPF 454 (484)
Q Consensus 375 ILd~LDP~~~lfs~rL~Re~C~~~~g~yiKDLs~LGrDlskVIIIDDsp~s~~~qp~NgIpI~sw~~d~~D~eLl~Llpf 454 (484)
|++.|++.+ .|++++||++|....|.|+|||..+||++.+|||||++|.+|.+||+|+|+|++|.+++.|.+|++|++|
T Consensus 284 v~d~l~~~k-~~~~~lfr~sc~~~~G~~ikDis~i~r~l~~viiId~~p~SY~~~p~~~i~i~~W~~d~~d~el~~ll~~ 362 (390)
T COG5190 284 VLDILDSDK-VFSHRLFRESCVSYLGVYIKDISKIGRSLDKVIIIDNSPASYEFHPENAIPIEKWISDEHDDELLNLLPF 362 (390)
T ss_pred HHHhccccc-eeehhhhcccceeccCchhhhHHhhccCCCceEEeeCChhhhhhCccceeccCcccccccchhhhhhccc
Confidence 999999998 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhccC--CCCcHHHHHhHhCC
Q 011504 455 LDILAD--AEDVRPIIAKTFGS 474 (484)
Q Consensus 455 Le~L~~--~~DVR~iL~k~f~~ 474 (484)
|+.|.. ..||+.+|..+-+.
T Consensus 363 le~L~~~~~~d~~~~l~~~~~~ 384 (390)
T COG5190 363 LEDLPDRDLKDVSSILQSRLEK 384 (390)
T ss_pred ccccccccchhhhhhhhhhhHh
Confidence 999998 89999999776544
No 8
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=99.94 E-value=3.1e-26 Score=208.32 Aligned_cols=145 Identities=49% Similarity=0.857 Sum_probs=129.7
Q ss_pred CceEEEEeccccccccccc---ccCCCCceEEEEeccccceeeeeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHHH
Q 011504 302 KSVTLVLDLDETLVHSTLE---YCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDI 378 (484)
Q Consensus 302 kK~tLVLDLDeTLVhSs~~---~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Lsk~YEIvIfTAs~~~YAd~ILd~ 378 (484)
+|++|||||||||||+... +.....+...+.+......+++++|||+.+||++|.+.|+++|||++.+.||+.+++.
T Consensus 1 ~k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~~~~~l~I~Ts~~~~~~~~il~~ 80 (148)
T smart00577 1 KKKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRASELFELVVFTAGLRMYADPVLDL 80 (148)
T ss_pred CCcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHHhccEEEEEeCCcHHHHHHHHHH
Confidence 5789999999999999632 2233455666677788889999999999999999999999999999999999999999
Q ss_pred hCCCCCceeEEEeecceeeeCCcccccccccCCCCCcEEEEECCchhhccCCCceeeeccccCCCCch
Q 011504 379 LDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWFDDPSDC 446 (484)
Q Consensus 379 LDP~~~lfs~rL~Re~C~~~~g~yiKDLs~LGrDlskVIIIDDsp~s~~~qp~NgIpI~sw~~d~~D~ 446 (484)
+++.+.+|...+++++|...+..|.|+|+++|++++++|+|||++..|..+++|||+|++|.++.+|+
T Consensus 81 l~~~~~~f~~i~~~~d~~~~KP~~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~~f~~~~~d~ 148 (148)
T smart00577 81 LDPKKYFGYRRLFRDECVFVKGKYVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIKPWFGDPDDT 148 (148)
T ss_pred hCcCCCEeeeEEECccccccCCeEeecHHHcCCChhcEEEEECCHHHhhcCccCEEEecCcCCCCCCC
Confidence 99976567899999999887767999999999999999999999999999999999999999999874
No 9
>KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=99.77 E-value=1.2e-18 Score=190.17 Aligned_cols=137 Identities=31% Similarity=0.440 Sum_probs=109.3
Q ss_pred CCceEEEEecccccccccccccC--------CCCc-------eEEEEeccccceeeeeeCchHHHHHHHhhcceEEEEEc
Q 011504 301 RKSVTLVLDLDETLVHSTLEYCD--------DADF-------TFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFT 365 (484)
Q Consensus 301 ~kK~tLVLDLDeTLVhSs~~~~~--------~~Df-------~~~v~~~~~~~~v~V~lRPgL~eFLe~Lsk~YEIvIfT 365 (484)
++++.||+|||.||+|+...+.. ...+ .+.+........+||++|||+++||++++++||++|||
T Consensus 144 ~~~L~lv~Dld~tllh~~~~~~l~e~~~~l~~~~~~~~sn~dl~~~~~~~~~~~~~vKlRP~~~efL~~~sklfemhVyT 223 (635)
T KOG0323|consen 144 RKKLHLVLDLDHTLLHTILKSDLSETEKYLKEEAESVESNKDLFRFNPLGHDTEYLVKLRPFVHEFLKEANKLFEMHVYT 223 (635)
T ss_pred hhcceeehhhhhHHHHhhccchhhhhhhhcccccccccccccceeecccCCCceEEEEeCccHHHHHHHHHhhceeEEEe
Confidence 34479999999999999743211 0000 01111113344689999999999999999999999999
Q ss_pred CCcHHHHHHHHHHhCCCCCceeEEEe-ecceeeeCCccccccccc-CCCCCcEEEEECCchhhccCCCceeeecccc
Q 011504 366 ASQSIYAAQLLDILDPDGKLISRRVY-RESCIFSDGTYTKDLTVL-GVDLAKVAIIDNSPQVFRLQVNNGIPIESWF 440 (484)
Q Consensus 366 As~~~YAd~ILd~LDP~~~lfs~rL~-Re~C~~~~g~yiKDLs~L-GrDlskVIIIDDsp~s~~~qp~NgIpI~sw~ 440 (484)
.|.+.||..|++.|||.++||++|++ |+. ....-.+||..+ .++.++||||||+..+|..++.|.|.|.+|.
T Consensus 224 mg~R~YA~~i~~liDP~~~lF~dRIisrde---~~~~kt~dL~~~~p~g~smvvIIDDr~dVW~~~~~nLI~i~~y~ 297 (635)
T KOG0323|consen 224 MGTRDYALEIAKLIDPEGKYFGDRIISRDE---SPFFKTLDLVLLFPCGDSMVVIIDDRSDVWPDHKRNLIQIAPYP 297 (635)
T ss_pred ccchHHHHHHHHHhCCCCccccceEEEecC---CCcccccccccCCCCCCccEEEEeCccccccCCCcceEEeeeee
Confidence 99999999999999999999998887 665 445567777776 4677889999999999999999999999985
No 10
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=98.52 E-value=2.9e-07 Score=87.21 Aligned_cols=138 Identities=14% Similarity=0.064 Sum_probs=91.9
Q ss_pred eEEEEecccccccccccccCCCCceEEEEecc---ccceeeeeeCchHHHHHHHhh-cceEEEEEcCC-cHHHHHHHHHH
Q 011504 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNM---KEHTVYVKQRPHLKTFLERVA-EMFEVVIFTAS-QSIYAAQLLDI 378 (484)
Q Consensus 304 ~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~---~~~~v~V~lRPgL~eFLe~Ls-k~YEIvIfTAs-~~~YAd~ILd~ 378 (484)
.++|||||+||..-..-.....-+...-...+ ......+.++||+.++|++|. +.+.+.|.|++ ...++..+++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~ 82 (174)
T TIGR01685 3 RVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGT 82 (174)
T ss_pred cEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHh
Confidence 47999999999764432222221110000000 112345788999999999998 67999999988 99999999999
Q ss_pred hCCC--C------CceeEEEeecceeeeCC--cccccccc-c--CCCCCcEEEEECCchhhccCCCceeeeccccC
Q 011504 379 LDPD--G------KLISRRVYRESCIFSDG--TYTKDLTV-L--GVDLAKVAIIDNSPQVFRLQVNNGIPIESWFD 441 (484)
Q Consensus 379 LDP~--~------~lfs~rL~Re~C~~~~g--~yiKDLs~-L--GrDlskVIIIDDsp~s~~~qp~NgIpI~sw~~ 441 (484)
++.. + .+|...+..+....... ...+.+.. + |-+++++++|||++........+|+.+.-...
T Consensus 83 ~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v~~ 158 (174)
T TIGR01685 83 FEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYCPS 158 (174)
T ss_pred CCcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEcCC
Confidence 9865 1 47877776543211000 11222222 2 57899999999999988878889998876643
No 11
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=98.45 E-value=1.3e-07 Score=84.39 Aligned_cols=111 Identities=15% Similarity=0.133 Sum_probs=76.0
Q ss_pred eEEEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhh-cceEEEEEcCC-cHHHHHHHHHHhCC
Q 011504 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTAS-QSIYAAQLLDILDP 381 (484)
Q Consensus 304 ~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Ls-k~YEIvIfTAs-~~~YAd~ILd~LDP 381 (484)
+.||+||||||+..-..... .+-.. . .. .+.||+.++|++++ +.+.++|.|++ .+.++..+++.+.+
T Consensus 1 kli~~DlD~Tl~~~~~~~~~-~~~~~----~-~~-----~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~ 69 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVVG-EDPII----D-LE-----VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFED 69 (128)
T ss_pred CEEEEeCCCCCCCCCccccc-CCcch----h-hH-----HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccc
Confidence 36899999999866210000 00000 0 00 56899999999998 57999999999 99999999998762
Q ss_pred ------CCCceeEEEeecceeeeCCcccccccccC--CCCCcEEEEECCchhh
Q 011504 382 ------DGKLISRRVYRESCIFSDGTYTKDLTVLG--VDLAKVAIIDNSPQVF 426 (484)
Q Consensus 382 ------~~~lfs~rL~Re~C~~~~g~yiKDLs~LG--rDlskVIIIDDsp~s~ 426 (484)
-..+|......+.- .....|.+-+.++| ..++++++|||++...
T Consensus 70 ~~~i~~l~~~f~~~~~~~~~-pkp~~~~~a~~~lg~~~~p~~~l~igDs~~n~ 121 (128)
T TIGR01681 70 FGIIFPLAEYFDPLTIGYWL-PKSPRLVEIALKLNGVLKPKSILFVDDRPDNN 121 (128)
T ss_pred cccchhhHhhhhhhhhcCCC-cHHHHHHHHHHHhcCCCCcceEEEECCCHhHH
Confidence 12345544443221 12235667777889 9999999999998753
No 12
>COG5190 FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=98.26 E-value=4.7e-07 Score=95.29 Aligned_cols=137 Identities=30% Similarity=0.446 Sum_probs=102.7
Q ss_pred CCCceEEEEecccccccccccccC----------CCCceEEEEeccccceeeeeeCchHHHHHHHhhcceEEEEEcCCcH
Q 011504 300 GRKSVTLVLDLDETLVHSTLEYCD----------DADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQS 369 (484)
Q Consensus 300 ~~kK~tLVLDLDeTLVhSs~~~~~----------~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Lsk~YEIvIfTAs~~ 369 (484)
.+++..||.|+|.|.+|+...+.. ...+.....+......+++++||++..|+...++.||+.+||.+.+
T Consensus 23 q~~~~~l~~~~~~~~~h~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~l~~~~~~i~~~~e~~~~~~~~~ 102 (390)
T COG5190 23 QDKKLILVVDLDQTIIHTTVDPNDPNNVNQSLERTLKSVNDRDPVQEKCAYYVKARPKLFPFLTKISPLYELHIYTMGTR 102 (390)
T ss_pred cCcccccccccccceecccccCCCCCchhhhhhccccchhccccccccccceeeecccccchhhhhchhcceeeEeeccc
Confidence 456778999999999999866511 0111111112223457889999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCceeEEEeecceeeeCCccccccccc-CCCCCcEEEEECCchhhcc--CCCceeeecc
Q 011504 370 IYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVL-GVDLAKVAIIDNSPQVFRL--QVNNGIPIES 438 (484)
Q Consensus 370 ~YAd~ILd~LDP~~~lfs~rL~Re~C~~~~g~yiKDLs~L-GrDlskVIIIDDsp~s~~~--qp~NgIpI~s 438 (484)
.||+.+.+++||.|++|..+....+ ...+.-.|-++++ ..+...++++||+++.|.- --.|.+...+
T Consensus 103 ~~~~~~~~i~d~~g~~~~d~~~~~~--~~~~~~~~s~~~l~p~~~n~~vi~~d~~~~~~~~d~~~~~v~~~~ 172 (390)
T COG5190 103 AYAERIAKIIDPTGKLFNDRILSRD--ESGSLSQKSLSRLFPKDQNMVVIIDDRGDVWGVGDMNSNFVAKSP 172 (390)
T ss_pred cchhhhhhccccccccccccccccc--ccccchhhhhhhcCccccccccccccccccCCccchhhhhhcccc
Confidence 9999999999999999987776333 2344556777776 6788999999999999921 2245666665
No 13
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=98.24 E-value=4.5e-07 Score=87.95 Aligned_cols=93 Identities=15% Similarity=0.164 Sum_probs=76.7
Q ss_pred eeeCchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeecceeeeC---CcccccccccCCCCCcEE
Q 011504 342 VKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVA 417 (484)
Q Consensus 342 V~lRPgL~eFLe~Lsk-~YEIvIfTAs~~~YAd~ILd~LDP~~~lfs~rL~Re~C~~~~---g~yiKDLs~LGrDlskVI 417 (484)
+...||+.++|+.+.+ .+.++|-|++.+.++...++.++-.. +|+..+..+.....+ ..|.+-++++|.++++++
T Consensus 92 ~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~-~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l 170 (224)
T PRK14988 92 AVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDA-HLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAERTL 170 (224)
T ss_pred CCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHH-HCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHHEE
Confidence 5678999999999995 69999999999999999999987654 788888765543222 246777888999999999
Q ss_pred EEECCchhhccCCCceee
Q 011504 418 IIDNSPQVFRLQVNNGIP 435 (484)
Q Consensus 418 IIDDsp~s~~~qp~NgIp 435 (484)
+|+|++.-......+|+.
T Consensus 171 ~igDs~~di~aA~~aG~~ 188 (224)
T PRK14988 171 FIDDSEPILDAAAQFGIR 188 (224)
T ss_pred EEcCCHHHHHHHHHcCCe
Confidence 999999888777778885
No 14
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=98.23 E-value=5.5e-07 Score=85.52 Aligned_cols=96 Identities=13% Similarity=0.126 Sum_probs=79.3
Q ss_pred eeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeecceeee---CCcccccccccCCCCCcEE
Q 011504 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFS---DGTYTKDLTVLGVDLAKVA 417 (484)
Q Consensus 342 V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~LDP~~~lfs~rL~Re~C~~~---~g~yiKDLs~LGrDlskVI 417 (484)
+.+.||+.++|+++. +.+.++|.|++.+.++..+++.++-.. +|...+..+.+... ...|.+-++.+|.++++++
T Consensus 81 ~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~-~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~ 159 (214)
T PRK13288 81 VTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDE-FFDVVITLDDVEHAKPDPEPVLKALELLGAKPEEAL 159 (214)
T ss_pred cccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChh-ceeEEEecCcCCCCCCCcHHHHHHHHHcCCCHHHEE
Confidence 567899999999998 579999999999999999999998775 88888876665432 3356677788899999999
Q ss_pred EEECCchhhccCCCceeeecc
Q 011504 418 IIDNSPQVFRLQVNNGIPIES 438 (484)
Q Consensus 418 IIDDsp~s~~~qp~NgIpI~s 438 (484)
+|+|++.-+.....+|++...
T Consensus 160 ~iGDs~~Di~aa~~aG~~~i~ 180 (214)
T PRK13288 160 MVGDNHHDILAGKNAGTKTAG 180 (214)
T ss_pred EECCCHHHHHHHHHCCCeEEE
Confidence 999999877777777887543
No 15
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=98.22 E-value=1.5e-06 Score=76.51 Aligned_cols=114 Identities=20% Similarity=0.209 Sum_probs=78.5
Q ss_pred eEEEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhh-cceEEEEEcCCc--------HHHHHH
Q 011504 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQ--------SIYAAQ 374 (484)
Q Consensus 304 ~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Ls-k~YEIvIfTAs~--------~~YAd~ 374 (484)
+.|+||+||||++.... ..........|++.++|++|. +.+.++|.|++. ..++..
T Consensus 1 k~~~~D~dgtL~~~~~~---------------~~~~~~~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~ 65 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPY---------------VDDEDERILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVAR 65 (132)
T ss_pred CEEEEeCCCceecCCCC---------------CCCHHHheeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHH
Confidence 37899999999964100 001113467899999999998 569999999999 888999
Q ss_pred HHHHhCCCCCceeEEEeecce-eeeCCccccccccc-CCCCCcEEEEEC-CchhhccCCCceee
Q 011504 375 LLDILDPDGKLISRRVYRESC-IFSDGTYTKDLTVL-GVDLAKVAIIDN-SPQVFRLQVNNGIP 435 (484)
Q Consensus 375 ILd~LDP~~~lfs~rL~Re~C-~~~~g~yiKDLs~L-GrDlskVIIIDD-sp~s~~~qp~NgIp 435 (484)
+++.++.. +...++...+ ......|.+-++.+ +.+++++++|+| ...-......+|+.
T Consensus 66 ~l~~~~l~---~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 66 RLEELGVP---IDVLYACPHCRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred HHHHCCCC---EEEEEECCCCCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCe
Confidence 99998764 2222232211 11234566777888 599999999999 56655545555554
No 16
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=98.19 E-value=1.2e-06 Score=74.15 Aligned_cols=107 Identities=21% Similarity=0.280 Sum_probs=73.9
Q ss_pred EEEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhCCCC
Q 011504 305 TLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEM-FEVVIFTASQSIYAAQLLDILDPDG 383 (484)
Q Consensus 305 tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Lsk~-YEIvIfTAs~~~YAd~ILd~LDP~~ 383 (484)
++|||+||||+........ ...+..+|++.++|+++.+. +.++|.|++.+.++..+++.+....
T Consensus 1 ~~vfD~D~tl~~~~~~~~~---------------~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~ 65 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIAE---------------IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDD 65 (139)
T ss_pred CeEEccCCceEccCccccc---------------cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCch
Confidence 4799999999876421100 23367899999999999965 9999999999999999999987643
Q ss_pred CceeEEEeecceeee----------------C---CcccccccccCCCCCcEEEEECCchhhc
Q 011504 384 KLISRRVYRESCIFS----------------D---GTYTKDLTVLGVDLAKVAIIDNSPQVFR 427 (484)
Q Consensus 384 ~lfs~rL~Re~C~~~----------------~---g~yiKDLs~LGrDlskVIIIDDsp~s~~ 427 (484)
++..++..+..... . ..+.+-+..++.+.+.++.|+|++.-..
T Consensus 66 -~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~ 127 (139)
T cd01427 66 -YFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIE 127 (139)
T ss_pred -hhhheeccchhhhhcccccccccccccccCCCCHHHHHHHHHHcCCChhhEEEeCCCHHHHH
Confidence 34444443322111 1 1222334455677899999999996543
No 17
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=98.10 E-value=1.1e-06 Score=88.43 Aligned_cols=95 Identities=11% Similarity=0.078 Sum_probs=72.1
Q ss_pred eeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeecceeeeCCcccccccccCCCCCcEEEEE
Q 011504 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIID 420 (484)
Q Consensus 342 V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~LDP~~~lfs~rL~Re~C~~~~g~yiKDLs~LGrDlskVIIID 420 (484)
+...||+.++|++|. +.+.++|.|++.+.++..+++.++... +|...+..+........+.+-+.+++.+++++++|+
T Consensus 141 ~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~-~F~~vi~~~~~~~k~~~~~~~l~~~~~~p~~~l~IG 219 (273)
T PRK13225 141 LQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRS-LFSVVQAGTPILSKRRALSQLVAREGWQPAAVMYVG 219 (273)
T ss_pred CCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChh-heEEEEecCCCCCCHHHHHHHHHHhCcChhHEEEEC
Confidence 456799999999998 569999999999999999999998765 787665543321112234455566788899999999
Q ss_pred CCchhhccCCCceeeec
Q 011504 421 NSPQVFRLQVNNGIPIE 437 (484)
Q Consensus 421 Dsp~s~~~qp~NgIpI~ 437 (484)
|++.-.......|+...
T Consensus 220 Ds~~Di~aA~~AG~~~I 236 (273)
T PRK13225 220 DETRDVEAARQVGLIAV 236 (273)
T ss_pred CCHHHHHHHHHCCCeEE
Confidence 99977666556777654
No 18
>COG4996 Predicted phosphatase [General function prediction only]
Probab=98.05 E-value=1.8e-05 Score=72.41 Aligned_cols=136 Identities=18% Similarity=0.089 Sum_probs=93.4
Q ss_pred EEEEecccccccccccccCCCCceEEEEecc--ccceeeeeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCC
Q 011504 305 TLVLDLDETLVHSTLEYCDDADFTFTVFFNM--KEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDP 381 (484)
Q Consensus 305 tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~--~~~~v~V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~LDP 381 (484)
.+|||+|+||.....-..-.+-|.. +..+. ...+.-|.++|++.+||+++. ..|-+..+|.....-|-++|..||.
T Consensus 2 ~i~~d~d~t~wdhh~iSsl~pPf~r-Vs~n~i~Ds~G~ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral~~ 80 (164)
T COG4996 2 AIVFDADKTLWDHHNISSLEPPFRR-VSSNTIEDSKGREVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRALDL 80 (164)
T ss_pred cEEEeCCCcccccccchhcCCccee-cCccceecCCCeEEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHhch
Confidence 5899999999753211101111211 00000 223567899999999999999 6799999999999999999999999
Q ss_pred CCCceeEEEeecceeeeCCccccccccc------CCCCCcEEEEECCchhh---ccCCCceeeeccccCCC
Q 011504 382 DGKLISRRVYRESCIFSDGTYTKDLTVL------GVDLAKVAIIDNSPQVF---RLQVNNGIPIESWFDDP 443 (484)
Q Consensus 382 ~~~lfs~rL~Re~C~~~~g~yiKDLs~L------GrDlskVIIIDDsp~s~---~~qp~NgIpI~sw~~d~ 443 (484)
.+ ||.+.....|-. ......+-|+.+ ...++++|.+||+...+ .....|.=.++.|.+-.
T Consensus 81 ~~-yFhy~ViePhP~-K~~ML~~llr~i~~er~~~ikP~~Ivy~DDR~iH~~~Iwe~~G~V~~~~~~~Di~ 149 (164)
T COG4996 81 LQ-YFHYIVIEPHPY-KFLMLSQLLREINTERNQKIKPSEIVYLDDRRIHFGNIWEYLGNVKCLEMWKDIS 149 (164)
T ss_pred hh-hEEEEEecCCCh-hHHHHHHHHHHHHHhhccccCcceEEEEecccccHHHHHHhcCCeeeeEeecchH
Confidence 86 898777765532 111222333332 34789999999999766 44677888888888653
No 19
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.04 E-value=1.8e-06 Score=82.07 Aligned_cols=97 Identities=13% Similarity=0.203 Sum_probs=70.4
Q ss_pred eeeCchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeeccee-----------e--eCCccccccc
Q 011504 342 VKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCI-----------F--SDGTYTKDLT 407 (484)
Q Consensus 342 V~lRPgL~eFLe~Lsk-~YEIvIfTAs~~~YAd~ILd~LDP~~~lfs~rL~Re~C~-----------~--~~g~yiKDLs 407 (484)
+..+||+.+||+.+.+ .+.++|.|++...++..+++.++-.. +|...+.-++-. . ....+.+-++
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 162 (219)
T TIGR00338 84 LPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDA-AFANRLEVEDGKLTGLVEGPIVDASYKGKTLLILLR 162 (219)
T ss_pred CCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCc-eEeeEEEEECCEEEEEecCcccCCcccHHHHHHHHH
Confidence 5689999999999995 69999999999999999999987765 565544321111 0 1112334455
Q ss_pred ccCCCCCcEEEEECCchhhccCCCceeeecccc
Q 011504 408 VLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWF 440 (484)
Q Consensus 408 ~LGrDlskVIIIDDsp~s~~~qp~NgIpI~sw~ 440 (484)
.+|.+++++++|+|++.-.......|+.+ .|.
T Consensus 163 ~~~~~~~~~i~iGDs~~Di~aa~~ag~~i-~~~ 194 (219)
T TIGR00338 163 KEGISPENTVAVGDGANDLSMIKAAGLGI-AFN 194 (219)
T ss_pred HcCCCHHHEEEEECCHHHHHHHHhCCCeE-EeC
Confidence 67889999999999987665555567766 343
No 20
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=97.99 E-value=1.7e-05 Score=81.00 Aligned_cols=123 Identities=14% Similarity=0.152 Sum_probs=85.8
Q ss_pred CCCceEEEEecccccccccccccCCCCceEEEEeccccceeeeeeC-chHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHH
Q 011504 300 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQR-PHLKTFLERVAE-MFEVVIFTASQSIYAAQLLD 377 (484)
Q Consensus 300 ~~kK~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lR-PgL~eFLe~Lsk-~YEIvIfTAs~~~YAd~ILd 377 (484)
...++.+||||||||+.... -|..| ||+.++|++|.+ .+.++|||++.+.++..+++
T Consensus 123 ~~~~kvIvFDLDgTLi~~~~---------------------~v~irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~ 181 (301)
T TIGR01684 123 FEPPHVVVFDLDSTLITDEE---------------------PVRIRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMR 181 (301)
T ss_pred cccceEEEEecCCCCcCCCC---------------------ccccCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHH
Confidence 45667999999999986531 26679 999999999996 59999999999999999999
Q ss_pred HhCCCCCceeEEEeecceeee----------------CCcccccc-----------------cccCCCC-CcEEEEECCc
Q 011504 378 ILDPDGKLISRRVYRESCIFS----------------DGTYTKDL-----------------TVLGVDL-AKVAIIDNSP 423 (484)
Q Consensus 378 ~LDP~~~lfs~rL~Re~C~~~----------------~g~yiKDL-----------------s~LGrDl-skVIIIDDsp 423 (484)
.++..+ +|...+..++.... ...+..|. .+.|..- +-+-+|||-+
T Consensus 182 ~lGLd~-YFdvIIs~Gdv~~~kp~~e~~d~~~~~~~~~~~f~~d~~~~~~lPKSprvvl~yL~~~gvn~~KtitLVDDl~ 260 (301)
T TIGR01684 182 KVKLDR-YFDIIISGGHKAEEYSTMSTEDRQYRYVFTKTPFYLNTTDGKRLPKSPRVVLWYLYDLGVNYFKSITLVDDLA 260 (301)
T ss_pred HcCCCc-ccCEEEECCccccCCCCccccccccceEEecCCeEEeCCCCCcCCCCCeehHHHHHHcCCceeeeEEEeccCc
Confidence 999886 77666664433211 11222233 2234443 3457899988
Q ss_pred hhhccCCCceeeeccccCCCCc
Q 011504 424 QVFRLQVNNGIPIESWFDDPSD 445 (484)
Q Consensus 424 ~s~~~qp~NgIpI~sw~~d~~D 445 (484)
.. .+.-+|.+.++..-.-.+|
T Consensus 261 ~N-n~~YD~fv~v~rcp~P~~D 281 (301)
T TIGR01684 261 DN-NFNYDYFVNVSRCPVPVND 281 (301)
T ss_pred cc-CccceeEEEeeeCCCCchH
Confidence 63 2355788877776544333
No 21
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=97.98 E-value=3e-05 Score=79.40 Aligned_cols=123 Identities=16% Similarity=0.197 Sum_probs=87.4
Q ss_pred CCCceEEEEecccccccccccccCCCCceEEEEeccccceeeeeeC-chHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHH
Q 011504 300 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQR-PHLKTFLERVAE-MFEVVIFTASQSIYAAQLLD 377 (484)
Q Consensus 300 ~~kK~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lR-PgL~eFLe~Lsk-~YEIvIfTAs~~~YAd~ILd 377 (484)
.+.++.+|+||||||+.... -|.+| |++.++|++|++ ++.++|||++.++++..+++
T Consensus 125 ~~~~~~i~~D~D~TL~~~~~---------------------~v~irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le 183 (303)
T PHA03398 125 WEIPHVIVFDLDSTLITDEE---------------------PVRIRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLK 183 (303)
T ss_pred eeeccEEEEecCCCccCCCC---------------------ccccCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHH
Confidence 45677999999999997631 26678 999999999995 69999999999999999999
Q ss_pred HhCCCCCceeEEEeecceeee----------------CCccccccc-----------------ccCCCC-CcEEEEECCc
Q 011504 378 ILDPDGKLISRRVYRESCIFS----------------DGTYTKDLT-----------------VLGVDL-AKVAIIDNSP 423 (484)
Q Consensus 378 ~LDP~~~lfs~rL~Re~C~~~----------------~g~yiKDLs-----------------~LGrDl-skVIIIDDsp 423 (484)
.++..+ +|...+..++.... ...+..|.. +.|..- +-+-+|||-+
T Consensus 184 ~lgL~~-yFDvII~~g~i~~k~~~~~~~d~~~~~~~~~~~f~~d~~~~~~lPKSprvVl~yL~~~gvn~~KtiTLVDDl~ 262 (303)
T PHA03398 184 ETKLEG-YFDIIICGGRKAGEYSRRVIVDNKYKMVFVKKPFYLDVTDVKNLPKSPRVVLWYLRKKGVNYFKTITLVDDLK 262 (303)
T ss_pred HcCCCc-cccEEEECCCcccccccceeecccceeEEecCceeEeCCcccCCCCCCeehHHHHHHcCcceeccEEEeccCc
Confidence 999875 77666654443221 112223332 234444 3456788887
Q ss_pred hhhccCCCceeeeccccCCCCc
Q 011504 424 QVFRLQVNNGIPIESWFDDPSD 445 (484)
Q Consensus 424 ~s~~~qp~NgIpI~sw~~d~~D 445 (484)
.. .+.-+|.+.++..-.-.+|
T Consensus 263 ~N-n~~YD~fv~v~rcp~P~~D 283 (303)
T PHA03398 263 SN-NYSYDYFVNVKRCPEPVND 283 (303)
T ss_pred cc-CccceeEEEeeeCCCCcHH
Confidence 64 4577888888877654444
No 22
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=97.96 E-value=3.7e-06 Score=81.41 Aligned_cols=95 Identities=12% Similarity=0.032 Sum_probs=75.5
Q ss_pred eeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeecceeee---CCcccccccccCCCCCcEE
Q 011504 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFS---DGTYTKDLTVLGVDLAKVA 417 (484)
Q Consensus 342 V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~LDP~~~lfs~rL~Re~C~~~---~g~yiKDLs~LGrDlskVI 417 (484)
+.+.||+.++|++|+ +.+.++|-|++...++..+++.++-.+ +|...+..+.+... ...|.+-++++|.++++++
T Consensus 94 ~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~-~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~l 172 (229)
T PRK13226 94 SQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQ-RCAVLIGGDTLAERKPHPLPLLVAAERIGVAPTDCV 172 (229)
T ss_pred CeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchh-cccEEEecCcCCCCCCCHHHHHHHHHHhCCChhhEE
Confidence 678999999999998 458999999999999999999987665 67766665554322 2246777888999999999
Q ss_pred EEECCchhhccCCCceeeec
Q 011504 418 IIDNSPQVFRLQVNNGIPIE 437 (484)
Q Consensus 418 IIDDsp~s~~~qp~NgIpI~ 437 (484)
+|+|++.-.......|+...
T Consensus 173 ~IGDs~~Di~aA~~aG~~~i 192 (229)
T PRK13226 173 YVGDDERDILAARAAGMPSV 192 (229)
T ss_pred EeCCCHHHHHHHHHCCCcEE
Confidence 99999987766666676654
No 23
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=97.93 E-value=2.6e-06 Score=82.80 Aligned_cols=99 Identities=17% Similarity=0.209 Sum_probs=86.1
Q ss_pred eeeCchHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeecceeee---CCcccccccccCCCCCcEE
Q 011504 342 VKQRPHLKTFLERVAEM-FEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFS---DGTYTKDLTVLGVDLAKVA 417 (484)
Q Consensus 342 V~lRPgL~eFLe~Lsk~-YEIvIfTAs~~~YAd~ILd~LDP~~~lfs~rL~Re~C~~~---~g~yiKDLs~LGrDlskVI 417 (484)
+...||+.+||+.|.+. .-+++-|++.+..+..+++.+...+ +|..++++++.... +..|.+-..+||.+++++|
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~-~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~P~~Cv 163 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLD-YFDVIVTADDVARGKPAPDIYLLAAERLGVDPEECV 163 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChh-hcchhccHHHHhcCCCCCHHHHHHHHHcCCChHHeE
Confidence 78999999999999966 9999999999999999999999886 89999987776544 3478999999999999999
Q ss_pred EEECCchhhccCCCceeeeccccC
Q 011504 418 IIDNSPQVFRLQVNNGIPIESWFD 441 (484)
Q Consensus 418 IIDDsp~s~~~qp~NgIpI~sw~~ 441 (484)
+|+|++.-......-|+.+..+.+
T Consensus 164 viEDs~~Gi~Aa~aAGm~vv~v~~ 187 (221)
T COG0637 164 VVEDSPAGIQAAKAAGMRVVGVPA 187 (221)
T ss_pred EEecchhHHHHHHHCCCEEEEecC
Confidence 999999887766677777777765
No 24
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=97.93 E-value=1.4e-05 Score=74.57 Aligned_cols=115 Identities=15% Similarity=0.173 Sum_probs=77.7
Q ss_pred eEEEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhh-cceEEEEEcCCcH-------------
Q 011504 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQS------------- 369 (484)
Q Consensus 304 ~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~------------- 369 (484)
+.|.||+||||+-.. .|. ...--+.+.||+.++|++|. +.|.++|.|++..
T Consensus 2 ~~~~~D~Dgtl~~~~-------~~~--------~~~~~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~ 66 (176)
T TIGR00213 2 KAIFLDRDGTINIDH-------GYV--------HEIDNFEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQ 66 (176)
T ss_pred CEEEEeCCCCEeCCC-------CCC--------CCHHHeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHH
Confidence 578999999998321 110 01112456799999999999 5699999999885
Q ss_pred --HHHHHHHHHhCCCCCceeEEEeec-----------ceee---eCCcccccccccCCCCCcEEEEECCchhhccCCCce
Q 011504 370 --IYAAQLLDILDPDGKLISRRVYRE-----------SCIF---SDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNG 433 (484)
Q Consensus 370 --~YAd~ILd~LDP~~~lfs~rL~Re-----------~C~~---~~g~yiKDLs~LGrDlskVIIIDDsp~s~~~qp~Ng 433 (484)
.|...++..+... |...++.. .|.. ..+.|.+-++++|.+++++++|+|++.-......+|
T Consensus 67 ~~~~~~~~l~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG 143 (176)
T TIGR00213 67 LTEWMDWSLAERDVD---LDGIYYCPHHPEGVEEFRQVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAK 143 (176)
T ss_pred HHHHHHHHHHHcCCC---ccEEEECCCCCcccccccCCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCC
Confidence 3444555544332 44444322 2221 133567778889999999999999998776666777
Q ss_pred eee
Q 011504 434 IPI 436 (484)
Q Consensus 434 IpI 436 (484)
+..
T Consensus 144 ~~~ 146 (176)
T TIGR00213 144 VKT 146 (176)
T ss_pred CcE
Confidence 754
No 25
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=97.92 E-value=1.5e-05 Score=72.40 Aligned_cols=117 Identities=20% Similarity=0.248 Sum_probs=78.1
Q ss_pred eEEEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhh-cceEEEEEcCCcH-------------
Q 011504 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQS------------- 369 (484)
Q Consensus 304 ~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~------------- 369 (484)
++|+||+||||+........ ...-.+...||+.++|++|. +.|.++|.|++.+
T Consensus 1 ~~~~~d~dgtl~~~~~~~~~-------------~~~~~~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~ 67 (147)
T TIGR01656 1 PALFLDRDGVINEDTVSDYP-------------RSLDDWQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRA 67 (147)
T ss_pred CeEEEeCCCceeccCCcccC-------------CCHHHeEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHH
Confidence 37899999999986532110 01112467899999999998 6799999999874
Q ss_pred --HHHHHHHHHhCCCCCceeEEEee-----cc--ee-eeCCcccccccccCCCCCcEEEEECCchhhccCCCceeee
Q 011504 370 --IYAAQLLDILDPDGKLISRRVYR-----ES--CI-FSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPI 436 (484)
Q Consensus 370 --~YAd~ILd~LDP~~~lfs~rL~R-----e~--C~-~~~g~yiKDLs~LGrDlskVIIIDDsp~s~~~qp~NgIpI 436 (484)
.++..+++.++.. +...++. +. +. .....|.+-+..+|.+++++++|.|++.-.......||..
T Consensus 68 ~~~~~~~~l~~~~l~---~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~ 141 (147)
T TIGR01656 68 PNGRVLELLRQLGVA---VDGVLFCPHHPADNCSCRKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAA 141 (147)
T ss_pred HHHHHHHHHHhCCCc---eeEEEECCCCCCCCCCCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCE
Confidence 5677777777654 2122221 11 11 1123455666778999999999999987666555566653
No 26
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=97.87 E-value=2.5e-05 Score=79.87 Aligned_cols=109 Identities=17% Similarity=0.119 Sum_probs=76.0
Q ss_pred CceEEEEecccccccccccccCCCCceEEEEecccccee-eeeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHH-
Q 011504 302 KSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTV-YVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDI- 378 (484)
Q Consensus 302 kK~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v-~V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~- 378 (484)
.+++||+|||+||+.-..... ...++ .....|++.++|+.+. +.+.+.|.|...+..|..+++.
T Consensus 2 ~~k~~v~DlDnTlw~gv~~e~-------------g~~~i~~~~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~ 68 (320)
T TIGR01686 2 ALKVLVLDLDNTLWGGVLGED-------------GIDNLNLSPLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERR 68 (320)
T ss_pred CeEEEEEcCCCCCCCCEEccC-------------CccccccCccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhC
Confidence 367999999999975431110 01111 1224789999999998 6799999999999999999998
Q ss_pred ---hCCCCCceeEEEeecceeeeCCcccccccccCCCCCcEEEEECCchhh
Q 011504 379 ---LDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVF 426 (484)
Q Consensus 379 ---LDP~~~lfs~rL~Re~C~~~~g~yiKDLs~LGrDlskVIIIDDsp~s~ 426 (484)
+.... +|...... ..-....+.+-+..+|.+++.+|+|||++.-.
T Consensus 69 ~~~~~~~~-~f~~~~~~--~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~ 116 (320)
T TIGR01686 69 KDFILQAE-DFDARSIN--WGPKSESLRKIAKKLNLGTDSFLFIDDNPAER 116 (320)
T ss_pred ccccCcHH-HeeEEEEe--cCchHHHHHHHHHHhCCCcCcEEEECCCHHHH
Confidence 55443 55443221 11112345566677899999999999999654
No 27
>PHA02597 30.2 hypothetical protein; Provisional
Probab=97.86 E-value=2.7e-06 Score=79.80 Aligned_cols=96 Identities=13% Similarity=0.113 Sum_probs=68.5
Q ss_pred eeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhCCCC---CceeEEEeecceeeeCCcccccccccCCCCCcEEE
Q 011504 342 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDG---KLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAI 418 (484)
Q Consensus 342 V~lRPgL~eFLe~Lsk~YEIvIfTAs~~~YAd~ILd~LDP~~---~lfs~rL~Re~C~~~~g~yiKDLs~LGrDlskVII 418 (484)
+...||+.++|++|.+.+.+++-|++.......+++.+...+ .+|+..+..+........|.+-++.+| ++.+|+
T Consensus 73 ~~~~pG~~e~L~~L~~~~~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~~~~kp~~~~~a~~~~~--~~~~v~ 150 (197)
T PHA02597 73 LSAYDDALDVINKLKEDYDFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGHDESKEKLFIKAKEKYG--DRVVCF 150 (197)
T ss_pred ccCCCCHHHHHHHHHhcCCEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEeccCcccHHHHHHHHHHhC--CCcEEE
Confidence 668999999999999778777777776655555666664432 245666665554333344556667788 778999
Q ss_pred EECCchhhccCCCc--eeeeccc
Q 011504 419 IDNSPQVFRLQVNN--GIPIESW 439 (484)
Q Consensus 419 IDDsp~s~~~qp~N--gIpI~sw 439 (484)
|||++........+ ||+..-+
T Consensus 151 vgDs~~di~aA~~a~~Gi~~i~~ 173 (197)
T PHA02597 151 VDDLAHNLDAAHEALSQLPVIHM 173 (197)
T ss_pred eCCCHHHHHHHHHHHcCCcEEEe
Confidence 99999988777777 8876655
No 28
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=97.83 E-value=5.3e-05 Score=71.76 Aligned_cols=114 Identities=16% Similarity=0.212 Sum_probs=62.8
Q ss_pred ceEEEEecccccccccccccCCCCceEEEEeccc------cceeeeeeCchHHHHHHHhh-cceEEEEEcC-CcHHHHHH
Q 011504 303 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMK------EHTVYVKQRPHLKTFLERVA-EMFEVVIFTA-SQSIYAAQ 374 (484)
Q Consensus 303 K~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~------~~~v~V~lRPgL~eFLe~Ls-k~YEIvIfTA-s~~~YAd~ 374 (484)
++++|||||.||...-.... ..-|...... ..+.-|.+-|++.+.|+.|. +..+|.+.|. ..+.+|.+
T Consensus 3 PklvvFDLD~TlW~~~~~~~----~~~Pf~~~~~~~~v~D~~g~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~ 78 (169)
T PF12689_consen 3 PKLVVFDLDYTLWPPWMDTH----VGPPFKKISNGNVVVDSRGEEVSLYPDVPEILQELKERGVKLAVASRTDEPDWARE 78 (169)
T ss_dssp -SEEEE-STTTSSSS-TTTS----S-S-EEE-TTS--EEETT--EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHH
T ss_pred CcEEEEcCcCCCCchhHhhc----cCCCceecCCCCEEEeCCCCEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHH
Confidence 46899999999965532211 1112222222 23456899999999999999 5799999994 56889999
Q ss_pred HHHHhCCC-----C----CceeEEEeecceeeeCCcc---cccc-cccCCCCCcEEEEECCchhh
Q 011504 375 LLDILDPD-----G----KLISRRVYRESCIFSDGTY---TKDL-TVLGVDLAKVAIIDNSPQVF 426 (484)
Q Consensus 375 ILd~LDP~-----~----~lfs~rL~Re~C~~~~g~y---iKDL-s~LGrDlskVIIIDDsp~s~ 426 (484)
+|+.|+.. + .+|.+.- ...|.- .+.| +..|.+.+.++++||.....
T Consensus 79 ~L~~l~i~~~~~~~~~~~~~F~~~e------I~~gsK~~Hf~~i~~~tgI~y~eMlFFDDe~~N~ 137 (169)
T PF12689_consen 79 LLKLLEIDDADGDGVPLIEYFDYLE------IYPGSKTTHFRRIHRKTGIPYEEMLFFDDESRNI 137 (169)
T ss_dssp HHHHTT-C----------CCECEEE------ESSS-HHHHHHHHHHHH---GGGEEEEES-HHHH
T ss_pred HHHhcCCCccccccccchhhcchhh------eecCchHHHHHHHHHhcCCChhHEEEecCchhcc
Confidence 99999877 1 1343211 123322 2222 35689999999999998755
No 29
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=97.83 E-value=2.7e-05 Score=72.56 Aligned_cols=122 Identities=16% Similarity=0.144 Sum_probs=86.8
Q ss_pred eEEEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhh-cceEEEEEcCC---------------
Q 011504 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTAS--------------- 367 (484)
Q Consensus 304 ~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Ls-k~YEIvIfTAs--------------- 367 (484)
+.|+||.||||++.... .| . ....-.+..-||+.++|++|. +.|.++|.|+.
T Consensus 2 ~~~~~d~dg~l~~~~~~-----~~--~-----~~~~~~~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~ 69 (161)
T TIGR01261 2 KILFIDRDGTLIEEPPS-----DF--Q-----VDALEKLRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDG 69 (161)
T ss_pred CEEEEeCCCCccccCCC-----cc--c-----cCCHHHeeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHH
Confidence 57999999999985311 01 0 011124677899999999999 46999999996
Q ss_pred cHHHHHHHHHHhCCCCCceeEEEee-----cceeeeC---CcccccccccCCCCCcEEEEECCchhhccCCCceeeeccc
Q 011504 368 QSIYAAQLLDILDPDGKLISRRVYR-----ESCIFSD---GTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESW 439 (484)
Q Consensus 368 ~~~YAd~ILd~LDP~~~lfs~rL~R-----e~C~~~~---g~yiKDLs~LGrDlskVIIIDDsp~s~~~qp~NgIpI~sw 439 (484)
...++..+++.++.. |...++. +.+...+ +.+..-++.+|.+++++++|.|+..-......+|+....+
T Consensus 70 ~~~~~~~~l~~~gl~---fd~ii~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~~ 146 (161)
T TIGR01261 70 PHNLMLQIFRSQGII---FDDVLICPHFPDDNCDCRKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQY 146 (161)
T ss_pred HHHHHHHHHHHCCCc---eeEEEECCCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEEE
Confidence 466888888888875 6666553 4443322 2345556667889999999999987666666788876655
Q ss_pred c
Q 011504 440 F 440 (484)
Q Consensus 440 ~ 440 (484)
.
T Consensus 147 ~ 147 (161)
T TIGR01261 147 D 147 (161)
T ss_pred C
Confidence 4
No 30
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=97.82 E-value=3.2e-05 Score=72.20 Aligned_cols=116 Identities=15% Similarity=0.089 Sum_probs=77.3
Q ss_pred ceEEEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhhc-ceEEEEEcCCcH------------
Q 011504 303 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQS------------ 369 (484)
Q Consensus 303 K~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Lsk-~YEIvIfTAs~~------------ 369 (484)
.+.|+||+||||+-... . | ..... .+...||+.++|++|++ .|.++|.|++..
T Consensus 3 ~~~~~~d~~~t~~~~~~-~-----~------~~~~~--~~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~ 68 (181)
T PRK08942 3 MKAIFLDRDGVINVDSD-G-----Y------VKSPD--EWIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLN 68 (181)
T ss_pred ccEEEEECCCCcccCCc-c-----c------cCCHH--HeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHH
Confidence 46899999999964421 0 1 11111 24578999999999995 599999998863
Q ss_pred ---HHHHHHHHHhCCCCCceeEEEeecce-----eee---CCcccccccccCCCCCcEEEEECCchhhccCCCceee
Q 011504 370 ---IYAAQLLDILDPDGKLISRRVYRESC-----IFS---DGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIP 435 (484)
Q Consensus 370 ---~YAd~ILd~LDP~~~lfs~rL~Re~C-----~~~---~g~yiKDLs~LGrDlskVIIIDDsp~s~~~qp~NgIp 435 (484)
.+...+++.++. +|...++...+ ... ...|.+-+..+|.+++++++|.|++.-.......|+.
T Consensus 69 ~~~~~~~~~l~~~g~---~f~~i~~~~~~~~~~~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~ 142 (181)
T PRK08942 69 ALHEKMDWSLADRGG---RLDGIYYCPHHPEDGCDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVT 142 (181)
T ss_pred HHHHHHHHHHHHcCC---ccceEEECCCCCCCCCcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCe
Confidence 344445555433 35555554321 111 2356677788999999999999999766555556654
No 31
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=97.77 E-value=5e-06 Score=79.27 Aligned_cols=95 Identities=7% Similarity=0.065 Sum_probs=74.9
Q ss_pred eeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhCCCCCcee-EEEeecceeee---CCcccccccccCCCCCcEE
Q 011504 342 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLIS-RRVYRESCIFS---DGTYTKDLTVLGVDLAKVA 417 (484)
Q Consensus 342 V~lRPgL~eFLe~Lsk~YEIvIfTAs~~~YAd~ILd~LDP~~~lfs-~rL~Re~C~~~---~g~yiKDLs~LGrDlskVI 417 (484)
+...||+.++|+.+. +.++|.|++.+.+++.+++.++... +|. ..+..++.... ...|.+-+.++|..++++|
T Consensus 87 ~~~~~gv~~~L~~L~--~~~~ivTn~~~~~~~~~l~~~~l~~-~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l 163 (221)
T PRK10563 87 LEPIAGANALLESIT--VPMCVVSNGPVSKMQHSLGKTGMLH-YFPDKLFSGYDIQRWKPDPALMFHAAEAMNVNVENCI 163 (221)
T ss_pred CCcCCCHHHHHHHcC--CCEEEEeCCcHHHHHHHHHhcChHH-hCcceEeeHHhcCCCCCChHHHHHHHHHcCCCHHHeE
Confidence 567899999999994 8999999999999999999887765 675 45555443322 2356777888999999999
Q ss_pred EEECCchhhccCCCceeeeccc
Q 011504 418 IIDNSPQVFRLQVNNGIPIESW 439 (484)
Q Consensus 418 IIDDsp~s~~~qp~NgIpI~sw 439 (484)
+|+|++.-.......|+++.-+
T Consensus 164 ~igDs~~di~aA~~aG~~~i~~ 185 (221)
T PRK10563 164 LVDDSSAGAQSGIAAGMEVFYF 185 (221)
T ss_pred EEeCcHhhHHHHHHCCCEEEEE
Confidence 9999998877666778776544
No 32
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=97.73 E-value=2.5e-05 Score=78.10 Aligned_cols=128 Identities=12% Similarity=0.087 Sum_probs=92.3
Q ss_pred CCceEEEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHh
Q 011504 301 RKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDIL 379 (484)
Q Consensus 301 ~kK~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~L 379 (484)
.++..+++|+||||....... ..++. ........|++.++|+++. +.+.++|.|+....+++.+++.|
T Consensus 156 ~~~~~~~~D~dgtl~~~~~~~--~~~~~---------~~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l 224 (300)
T PHA02530 156 GLPKAVIFDIDGTLAKMGGRS--PYDWT---------KVKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWL 224 (300)
T ss_pred CCCCEEEEECCCcCcCCCCCC--ccchh---------hcccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHH
Confidence 345789999999998754211 11111 0112456999999999998 46999999999999999999999
Q ss_pred CCCCCceeEEEeecc-------eeeeC---CcccccccccCC-CCCcEEEEECCchhhccCCCceeeeccc
Q 011504 380 DPDGKLISRRVYRES-------CIFSD---GTYTKDLTVLGV-DLAKVAIIDNSPQVFRLQVNNGIPIESW 439 (484)
Q Consensus 380 DP~~~lfs~rL~Re~-------C~~~~---g~yiKDLs~LGr-DlskVIIIDDsp~s~~~qp~NgIpI~sw 439 (484)
+..+.+|...+..+. ..... ..+.+.|..++. +.+.++.|+|++........+||++...
T Consensus 225 ~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v 295 (300)
T PHA02530 225 RQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECWQV 295 (300)
T ss_pred HHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEEEe
Confidence 988767766555542 11111 134455666777 6799999999999888888899886544
No 33
>PLN02940 riboflavin kinase
Probab=97.69 E-value=7.4e-06 Score=86.11 Aligned_cols=97 Identities=10% Similarity=0.077 Sum_probs=77.5
Q ss_pred eeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHH-HhCCCCCceeEEEeecceeee---CCcccccccccCCCCCcE
Q 011504 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLD-ILDPDGKLISRRVYRESCIFS---DGTYTKDLTVLGVDLAKV 416 (484)
Q Consensus 342 V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd-~LDP~~~lfs~rL~Re~C~~~---~g~yiKDLs~LGrDlskV 416 (484)
+...||+.++|++|. +.+.++|-|++.+.++..+++ .++-. .+|+.++..+++... ...|.+-++.+|..++++
T Consensus 92 ~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~-~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~p~~~ 170 (382)
T PLN02940 92 IKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWK-ESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEPSNC 170 (382)
T ss_pred CCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChH-hhCCEEEehhhcCCCCCCHHHHHHHHHHcCCChhHE
Confidence 457899999999998 569999999999999999887 55544 489999888876533 235777888899999999
Q ss_pred EEEECCchhhccCCCceeeeccc
Q 011504 417 AIIDNSPQVFRLQVNNGIPIESW 439 (484)
Q Consensus 417 IIIDDsp~s~~~qp~NgIpI~sw 439 (484)
|+|+|++.-.......|+.....
T Consensus 171 l~VGDs~~Di~aA~~aGi~~I~v 193 (382)
T PLN02940 171 LVIEDSLPGVMAGKAAGMEVIAV 193 (382)
T ss_pred EEEeCCHHHHHHHHHcCCEEEEE
Confidence 99999998776666677764433
No 34
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=97.68 E-value=1.3e-05 Score=71.91 Aligned_cols=82 Identities=12% Similarity=0.058 Sum_probs=63.6
Q ss_pred eeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeecceeee--CCcccccccccCCCCCcEEE
Q 011504 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFS--DGTYTKDLTVLGVDLAKVAI 418 (484)
Q Consensus 342 V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~LDP~~~lfs~rL~Re~C~~~--~g~yiKDLs~LGrDlskVII 418 (484)
....||+.++|+.+. +.+.++|.|++.+..+..+++.+ . ..+|...+..++.... ...|.+-++++|.++ ++++
T Consensus 63 ~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l-~~~f~~i~~~~~~~~Kp~~~~~~~~~~~~~~~~-~~l~ 139 (154)
T TIGR01549 63 EAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-L-GDYFDLILGSDEFGAKPEPEIFLAALESLGLPP-EVLH 139 (154)
T ss_pred heeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-H-HhcCcEEEecCCCCCCcCHHHHHHHHHHcCCCC-CEEE
Confidence 455699999999996 67999999999999999999996 2 3467777766655311 234666777889888 9999
Q ss_pred EECCchhh
Q 011504 419 IDNSPQVF 426 (484)
Q Consensus 419 IDDsp~s~ 426 (484)
|.|++.-.
T Consensus 140 iGDs~~Di 147 (154)
T TIGR01549 140 VGDNLNDI 147 (154)
T ss_pred EeCCHHHH
Confidence 99997533
No 35
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=97.58 E-value=0.0001 Score=73.27 Aligned_cols=133 Identities=12% Similarity=0.088 Sum_probs=77.6
Q ss_pred CCCceEEEEecccccccccccc-c-----CCCCceEEE--Eeccc---cceeeeeeCchHHHHHHHhh-cceEEEEEcCC
Q 011504 300 GRKSVTLVLDLDETLVHSTLEY-C-----DDADFTFTV--FFNMK---EHTVYVKQRPHLKTFLERVA-EMFEVVIFTAS 367 (484)
Q Consensus 300 ~~kK~tLVLDLDeTLVhSs~~~-~-----~~~Df~~~v--~~~~~---~~~v~V~lRPgL~eFLe~Ls-k~YEIvIfTAs 367 (484)
.++++.++|||||||++++-.- . ...++...+ .+... ...-.....|++.+||+++. +.+.++|-|+.
T Consensus 60 ~~~p~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l~~~G~~i~iVTnr 139 (237)
T TIGR01672 60 GRPPIAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRGDAIFFVTGR 139 (237)
T ss_pred CCCCeEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHHHHCCCEEEEEeCC
Confidence 4456699999999999997411 0 111011000 00000 00112344455999999998 56999999998
Q ss_pred ----cHHHHHHHHHHhCCCCCceeEEEeecceeeeCCcccccccccCCCCCcEEEEECCchhhccCCCceeeec
Q 011504 368 ----QSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIE 437 (484)
Q Consensus 368 ----~~~YAd~ILd~LDP~~~lfs~rL~Re~C~~~~g~yiKDLs~LGrDlskVIIIDDsp~s~~~qp~NgIpI~ 437 (484)
...+++.+++.++..+ +|...+..+.... ..+-|. ..+ ....-+|.|-|+..-+......|+...
T Consensus 140 ~~~k~~~~a~~ll~~lGi~~-~f~~i~~~d~~~~--~Kp~~~-~~l-~~~~i~i~vGDs~~DI~aAk~AGi~~I 208 (237)
T TIGR01672 140 TPGKTDTVSKTLAKNFHIPA-MNPVIFAGDKPGQ--YQYTKT-QWI-QDKNIRIHYGDSDNDITAAKEAGARGI 208 (237)
T ss_pred CCCcCHHHHHHHHHHhCCch-heeEEECCCCCCC--CCCCHH-HHH-HhCCCeEEEeCCHHHHHHHHHCCCCEE
Confidence 7789999999998865 6755544443221 111121 112 122337889988876655556666533
No 36
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=97.54 E-value=0.00018 Score=67.37 Aligned_cols=107 Identities=18% Similarity=0.258 Sum_probs=68.4
Q ss_pred ceEEEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhh-cceEEEEEcCCcHH-----------
Q 011504 303 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSI----------- 370 (484)
Q Consensus 303 K~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~----------- 370 (484)
+++++||+||||+-..... .| ......| ..+-||+.+.|++|. +.|.++|.|++...
T Consensus 13 ~k~~~~D~Dgtl~~~~~~~----~~------~~~~~~~-~~~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~ 81 (166)
T TIGR01664 13 SKVAAFDLDGTLITTRSGK----VF------PTSASDW-RFLYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFK 81 (166)
T ss_pred CcEEEEeCCCceEecCCCC----cc------cCChHHe-EEecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHH
Confidence 4689999999998643110 00 0000111 124599999999997 68999999998763
Q ss_pred -HHHHHHHHhCCCCCceeEEEeecceeee---CCcccccccccC--CCCCcEEEEECCc
Q 011504 371 -YAAQLLDILDPDGKLISRRVYRESCIFS---DGTYTKDLTVLG--VDLAKVAIIDNSP 423 (484)
Q Consensus 371 -YAd~ILd~LDP~~~lfs~rL~Re~C~~~---~g~yiKDLs~LG--rDlskVIIIDDsp 423 (484)
++..+++.++.. +...+..+..... .+.+..-+..+| .+++++++|.|++
T Consensus 82 ~~i~~~l~~~gl~---~~~ii~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~ 137 (166)
T TIGR01664 82 NKIEAFLEKLKVP---IQVLAATHAGLYRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAA 137 (166)
T ss_pred HHHHHHHHHcCCC---EEEEEecCCCCCCCCccHHHHHHHHHcCCCCCchhcEEEECCC
Confidence 567788887763 2223332221111 234445566777 8899999999986
No 37
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=97.50 E-value=9.6e-05 Score=65.66 Aligned_cols=95 Identities=18% Similarity=0.310 Sum_probs=77.8
Q ss_pred eeeeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeecceeeeC---CcccccccccCCCCCc
Q 011504 340 VYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAK 415 (484)
Q Consensus 340 v~V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~LDP~~~lfs~rL~Re~C~~~~---g~yiKDLs~LGrDlsk 415 (484)
......||+.++|+.++ +.+.++|.|.+...++..+++.+... .+|...++.++....+ ..|.+-++.+|.++++
T Consensus 74 ~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~-~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~ 152 (176)
T PF13419_consen 74 SKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLD-DYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPEE 152 (176)
T ss_dssp GGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHG-GGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGGG
T ss_pred hccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccc-cccccccccchhhhhhhHHHHHHHHHHHcCCCcce
Confidence 35889999999999999 88999999999999999999999877 4898888876654332 3566777888999999
Q ss_pred EEEEECCchhhccCCCceee
Q 011504 416 VAIIDNSPQVFRLQVNNGIP 435 (484)
Q Consensus 416 VIIIDDsp~s~~~qp~NgIp 435 (484)
+++|||++.........|++
T Consensus 153 ~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 153 ILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp EEEEESSHHHHHHHHHTTSE
T ss_pred EEEEeCCHHHHHHHHHcCCe
Confidence 99999999766554455544
No 38
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=97.39 E-value=0.00028 Score=65.83 Aligned_cols=110 Identities=16% Similarity=0.121 Sum_probs=76.8
Q ss_pred CCceEEEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhhc-ceEEEEEcCCc-HHHHHHHHHH
Q 011504 301 RKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQ-SIYAAQLLDI 378 (484)
Q Consensus 301 ~kK~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Lsk-~YEIvIfTAs~-~~YAd~ILd~ 378 (484)
.+-..||+|+||||..... ....|++.++|++|.+ .+.++|.|++. ...+..+++.
T Consensus 23 ~~v~~vv~D~Dgtl~~~~~----------------------~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~ 80 (170)
T TIGR01668 23 VGIKGVVLDKDNTLVYPDH----------------------NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKA 80 (170)
T ss_pred CCCCEEEEecCCccccCCC----------------------CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHH
Confidence 3456899999999985420 2346999999999985 59999999998 6788888777
Q ss_pred hCCCCCceeEEEeecceeeeCCcccccccccCCCCCcEEEEECCch-hhccCCCceeeeccc
Q 011504 379 LDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQ-VFRLQVNNGIPIESW 439 (484)
Q Consensus 379 LDP~~~lfs~rL~Re~C~~~~g~yiKDLs~LGrDlskVIIIDDsp~-s~~~qp~NgIpI~sw 439 (484)
++... ++ .........|.+-++.+|.+++++++|+|+.. -......+|+...-+
T Consensus 81 ~gl~~------~~-~~~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~i~v 135 (170)
T TIGR01668 81 LGIPV------LP-HAVKPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYTILV 135 (170)
T ss_pred cCCEE------Ec-CCCCCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeEEEE
Confidence 65421 11 11122233556667788999999999999983 454455566654433
No 39
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=97.37 E-value=0.00021 Score=65.56 Aligned_cols=86 Identities=10% Similarity=0.161 Sum_probs=59.8
Q ss_pred eeeCchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeecceeeeC-----------------Cccc
Q 011504 342 VKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD-----------------GTYT 403 (484)
Q Consensus 342 V~lRPgL~eFLe~Lsk-~YEIvIfTAs~~~YAd~ILd~LDP~~~lfs~rL~Re~C~~~~-----------------g~yi 403 (484)
+.++||+.++|+++.+ .+.++|.|++...+++.+++.++-.. +|...+..+...-.. ....
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~-~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~ 149 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKD-VFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGCC 149 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChh-heeEEeccCceECCCCcEEEecCCCCccCcCCCCCC
Confidence 6799999999999985 59999999999999999999987654 676666432211000 0112
Q ss_pred c--cccccCCC-CCcEEEEECCchhhcc
Q 011504 404 K--DLTVLGVD-LAKVAIIDNSPQVFRL 428 (484)
Q Consensus 404 K--DLs~LGrD-lskVIIIDDsp~s~~~ 428 (484)
| -+..+... .+++|+|+|+..-+..
T Consensus 150 K~~~~~~~~~~~~~~~i~iGD~~~D~~a 177 (188)
T TIGR01489 150 KGKVIHKLSEPKYQHIIYIGDGVTDVCP 177 (188)
T ss_pred HHHHHHHHHhhcCceEEEECCCcchhch
Confidence 2 22233334 7889999999876544
No 40
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=97.36 E-value=0.0002 Score=65.31 Aligned_cols=92 Identities=20% Similarity=0.254 Sum_probs=71.6
Q ss_pred eeeCchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeecceeeeC---CcccccccccCCCCCcEE
Q 011504 342 VKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVA 417 (484)
Q Consensus 342 V~lRPgL~eFLe~Lsk-~YEIvIfTAs~~~YAd~ILd~LDP~~~lfs~rL~Re~C~~~~---g~yiKDLs~LGrDlskVI 417 (484)
+..+||+.+||+++++ .|.++|.|++...+ ..++..++..+ +|...++.+.....+ ..|.+-++.+|.++++++
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~-~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~ 161 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRD-LFDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEECL 161 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHH-HCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcceEE
Confidence 5678999999999984 69999999999999 77766677665 788888765543322 356677788899999999
Q ss_pred EEECCchhhccCCCceee
Q 011504 418 IIDNSPQVFRLQVNNGIP 435 (484)
Q Consensus 418 IIDDsp~s~~~qp~NgIp 435 (484)
+|+|++.........|+.
T Consensus 162 ~vgD~~~di~aA~~~G~~ 179 (183)
T TIGR01509 162 FVDDSPAGIEAAKAAGMH 179 (183)
T ss_pred EEcCCHHHHHHHHHcCCE
Confidence 999999766555555654
No 41
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=97.33 E-value=6.7e-05 Score=70.46 Aligned_cols=94 Identities=18% Similarity=0.165 Sum_probs=62.5
Q ss_pred eeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEee-cceeee------CCcccccccccCCCCC
Q 011504 342 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYR-ESCIFS------DGTYTKDLTVLGVDLA 414 (484)
Q Consensus 342 V~lRPgL~eFLe~Lsk~YEIvIfTAs~~~YAd~ILd~LDP~~~lfs~rL~R-e~C~~~------~g~yiKDLs~LGrDls 414 (484)
+..+||+.+||+.+.+.+.++|-|++...+++.+++.++... +|...+.- +.-... ......-+..++....
T Consensus 67 ~~~~pg~~e~L~~L~~~~~~~IvS~~~~~~~~~~l~~~gl~~-~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~~~~~ 145 (205)
T PRK13582 67 LDPLPGAVEFLDWLRERFQVVILSDTFYEFAGPLMRQLGWPT-LFCHSLEVDEDGMITGYDLRQPDGKRQAVKALKSLGY 145 (205)
T ss_pred CCCCCCHHHHHHHHHhcCCEEEEeCCcHHHHHHHHHHcCCch-hhcceEEECCCCeEECccccccchHHHHHHHHHHhCC
Confidence 567899999999999669999999999999999999988654 56554432 111000 0111111233445557
Q ss_pred cEEEEECCchhhccCCCceeee
Q 011504 415 KVAIIDNSPQVFRLQVNNGIPI 436 (484)
Q Consensus 415 kVIIIDDsp~s~~~qp~NgIpI 436 (484)
+++.|-|+..-......+|+.+
T Consensus 146 ~~v~iGDs~~D~~~~~aa~~~v 167 (205)
T PRK13582 146 RVIAAGDSYNDTTMLGEADAGI 167 (205)
T ss_pred eEEEEeCCHHHHHHHHhCCCCE
Confidence 8999999997654443444444
No 42
>PRK06769 hypothetical protein; Validated
Probab=97.33 E-value=0.00018 Score=67.30 Aligned_cols=118 Identities=17% Similarity=0.157 Sum_probs=73.3
Q ss_pred eEEEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhh-cceEEEEEcCCcHHH-----HHHHHH
Q 011504 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIY-----AAQLLD 377 (484)
Q Consensus 304 ~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~Y-----Ad~ILd 377 (484)
..|+||+||||.- |. + ..+.-.+.+-||+.++|++|. +.|.++|.|++.... ......
T Consensus 5 ~~~~~d~d~~~~~--~~------~--------~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~ 68 (173)
T PRK06769 5 QAIFIDRDGTIGG--DT------T--------IHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQ 68 (173)
T ss_pred cEEEEeCCCcccC--CC------C--------CCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHH
Confidence 4799999999941 10 0 000012456799999999998 569999999986421 012333
Q ss_pred HhCCCCCceeEEEe-----ecceee---eCCcccccccccCCCCCcEEEEECCchhhccCCCceeeeccc
Q 011504 378 ILDPDGKLISRRVY-----RESCIF---SDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESW 439 (484)
Q Consensus 378 ~LDP~~~lfs~rL~-----Re~C~~---~~g~yiKDLs~LGrDlskVIIIDDsp~s~~~qp~NgIpI~sw 439 (484)
.+...+ |...+. .+.... ..+.|.+-++++|.+++++++|+|++.-.......|+...-.
T Consensus 69 ~l~~~g--~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v 136 (173)
T PRK06769 69 ELKGFG--FDDIYLCPHKHGDGCECRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTILV 136 (173)
T ss_pred HHHhCC--cCEEEECcCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEE
Confidence 333322 323332 111111 234677788889999999999999997666555666655433
No 43
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=97.28 E-value=0.0003 Score=70.31 Aligned_cols=98 Identities=11% Similarity=0.177 Sum_probs=81.9
Q ss_pred eeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeecceeeeC---CcccccccccCCCCCcEE
Q 011504 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVA 417 (484)
Q Consensus 342 V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~LDP~~~lfs~rL~Re~C~~~~---g~yiKDLs~LGrDlskVI 417 (484)
+.+.||+.++|++|. +.|.++|.|++.+.++..+++.++-.+ +|...+..+.+...+ ..|.+-+.++|.+++++|
T Consensus 108 ~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~-~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p~~~l 186 (260)
T PLN03243 108 YRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEG-FFSVVLAAEDVYRGKPDPEMFMYAAERLGFIPERCI 186 (260)
T ss_pred cccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHh-hCcEEEecccCCCCCCCHHHHHHHHHHhCCChHHeE
Confidence 567899999999998 569999999999999999999998665 899988877664332 357788889999999999
Q ss_pred EEECCchhhccCCCceeeecccc
Q 011504 418 IIDNSPQVFRLQVNNGIPIESWF 440 (484)
Q Consensus 418 IIDDsp~s~~~qp~NgIpI~sw~ 440 (484)
+|+|+..-.......|+.+....
T Consensus 187 ~IgDs~~Di~aA~~aG~~~i~v~ 209 (260)
T PLN03243 187 VFGNSNSSVEAAHDGCMKCVAVA 209 (260)
T ss_pred EEcCCHHHHHHHHHcCCEEEEEe
Confidence 99999988877777787765443
No 44
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=97.26 E-value=0.00039 Score=68.40 Aligned_cols=97 Identities=16% Similarity=0.251 Sum_probs=81.4
Q ss_pred eeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeecceeee---CCcccccccccCCCCCcEE
Q 011504 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFS---DGTYTKDLTVLGVDLAKVA 417 (484)
Q Consensus 342 V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~LDP~~~lfs~rL~Re~C~~~---~g~yiKDLs~LGrDlskVI 417 (484)
+.+.||+.++|++|. +.+.++|-|++.+.+++.+++.++..+ +|...+..+.+... ...|.+-++++|.++++++
T Consensus 107 ~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~-~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~~~~~l 185 (248)
T PLN02770 107 LKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSD-FFQAVIIGSECEHAKPHPDPYLKALEVLKVSKDHTF 185 (248)
T ss_pred CCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChh-hCcEEEecCcCCCCCCChHHHHHHHHHhCCChhHEE
Confidence 667899999999997 569999999999999999999998775 89888887765432 2357788889999999999
Q ss_pred EEECCchhhccCCCceeeeccc
Q 011504 418 IIDNSPQVFRLQVNNGIPIESW 439 (484)
Q Consensus 418 IIDDsp~s~~~qp~NgIpI~sw 439 (484)
+|+|++.-......+|++....
T Consensus 186 ~vgDs~~Di~aA~~aGi~~i~v 207 (248)
T PLN02770 186 VFEDSVSGIKAGVAAGMPVVGL 207 (248)
T ss_pred EEcCCHHHHHHHHHCCCEEEEE
Confidence 9999998777667788876644
No 45
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=97.25 E-value=0.0003 Score=66.73 Aligned_cols=95 Identities=15% Similarity=0.176 Sum_probs=75.7
Q ss_pred eeeCchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeecceeee---CCcccccccccCCCCCcEE
Q 011504 342 VKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFS---DGTYTKDLTVLGVDLAKVA 417 (484)
Q Consensus 342 V~lRPgL~eFLe~Lsk-~YEIvIfTAs~~~YAd~ILd~LDP~~~lfs~rL~Re~C~~~---~g~yiKDLs~LGrDlskVI 417 (484)
+.+.||+.+||++|.+ .+.++|.|++...++...++.++... +|..++..+..... ...|.+-++++|.+++++|
T Consensus 93 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~-~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~ 171 (221)
T TIGR02253 93 LRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRD-FFDAVITSEEEGVEKPHPKIFYAALKRLGVKPEEAV 171 (221)
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHH-hccEEEEeccCCCCCCCHHHHHHHHHHcCCChhhEE
Confidence 6789999999999985 59999999999999999999998765 88888877665432 2357778889999999999
Q ss_pred EEECCc-hhhccCCCceeeec
Q 011504 418 IIDNSP-QVFRLQVNNGIPIE 437 (484)
Q Consensus 418 IIDDsp-~s~~~qp~NgIpI~ 437 (484)
+|.|++ .-+......|+...
T Consensus 172 ~igDs~~~di~~A~~aG~~~i 192 (221)
T TIGR02253 172 MVGDRLDKDIKGAKNLGMKTV 192 (221)
T ss_pred EECCChHHHHHHHHHCCCEEE
Confidence 999998 45544445565543
No 46
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=97.24 E-value=0.00023 Score=70.11 Aligned_cols=90 Identities=22% Similarity=0.330 Sum_probs=72.0
Q ss_pred eeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeecc---------eeeeCCcccccccccCCC
Q 011504 342 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRES---------CIFSDGTYTKDLTVLGVD 412 (484)
Q Consensus 342 V~lRPgL~eFLe~Lsk~YEIvIfTAs~~~YAd~ILd~LDP~~~lfs~rL~Re~---------C~~~~g~yiKDLs~LGrD 412 (484)
++.-|-|++||-.|.+.+ .++||++.+..|..+|++|+... .|...++.+- |......|.|-.+..|.+
T Consensus 99 LkPD~~LRnlLL~l~~r~-k~~FTNa~k~HA~r~Lk~LGieD-cFegii~~e~~np~~~~~vcKP~~~afE~a~k~agi~ 176 (244)
T KOG3109|consen 99 LKPDPVLRNLLLSLKKRR-KWIFTNAYKVHAIRILKKLGIED-CFEGIICFETLNPIEKTVVCKPSEEAFEKAMKVAGID 176 (244)
T ss_pred cCCCHHHHHHHHhCcccc-EEEecCCcHHHHHHHHHHhChHH-hccceeEeeccCCCCCceeecCCHHHHHHHHHHhCCC
Confidence 667778999999999877 89999999999999999999886 7888877442 333345667777778887
Q ss_pred -CCcEEEEECCchhhccCCCce
Q 011504 413 -LAKVAIIDNSPQVFRLQVNNG 433 (484)
Q Consensus 413 -lskVIIIDDsp~s~~~qp~Ng 433 (484)
++|++++||+.........=|
T Consensus 177 ~p~~t~FfDDS~~NI~~ak~vG 198 (244)
T KOG3109|consen 177 SPRNTYFFDDSERNIQTAKEVG 198 (244)
T ss_pred CcCceEEEcCchhhHHHHHhcc
Confidence 999999999998875544433
No 47
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=97.22 E-value=0.0019 Score=65.88 Aligned_cols=123 Identities=16% Similarity=0.221 Sum_probs=82.2
Q ss_pred CCCceEEEEecccccccccccccCCCCceEEEEeccccceeeeee-CchHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHH
Q 011504 300 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQ-RPHLKTFLERVAEM-FEVVIFTASQSIYAAQLLD 377 (484)
Q Consensus 300 ~~kK~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~l-RPgL~eFLe~Lsk~-YEIvIfTAs~~~YAd~ILd 377 (484)
.+++-.+|+|||.|||-.... +++ -|.+-+-|.++++. .-+++||.|.+++|...++
T Consensus 119 ~~~phVIVfDlD~TLItd~~~---------------------v~Ir~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~ 177 (297)
T PF05152_consen 119 WEPPHVIVFDLDSTLITDEGD---------------------VRIRDPAVYDSLRELKEQGCVLVLWSYGNREHVRHSLK 177 (297)
T ss_pred CCCCcEEEEECCCcccccCCc---------------------cccCChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHH
Confidence 344559999999999976421 222 38888999999965 5999999999999999999
Q ss_pred HhCCCCCceeEEEeeccee----------------eeCCcccccc-----------------cccCCCC-CcEEEEECCc
Q 011504 378 ILDPDGKLISRRVYRESCI----------------FSDGTYTKDL-----------------TVLGVDL-AKVAIIDNSP 423 (484)
Q Consensus 378 ~LDP~~~lfs~rL~Re~C~----------------~~~g~yiKDL-----------------s~LGrDl-skVIIIDDsp 423 (484)
.++..+ +|...|.+..-. +....+..|. ++.|..- +-+-+|||-+
T Consensus 178 ~~~L~~-~Fd~ii~~G~~~~~~~~~~~~d~~~~~~f~~~~FylDv~~~~~LPKSPrVVL~yL~k~gvny~KtiTLVDDL~ 256 (297)
T PF05152_consen 178 ELKLEG-YFDIIICGGNKAGEYNSRVIVDRQYKVIFVSKPFYLDVTNVNNLPKSPRVVLWYLRKKGVNYFKTITLVDDLK 256 (297)
T ss_pred HhCCcc-ccEEEEeCCccCCcCCccceeecccceEEeccceEEeCCcCCCCCCCCeehHHHHHHcCCceeeeEEEeccCc
Confidence 999885 898888754311 1111122222 2234443 3345777777
Q ss_pred hhhccCCCceeeeccccCCCCc
Q 011504 424 QVFRLQVNNGIPIESWFDDPSD 445 (484)
Q Consensus 424 ~s~~~qp~NgIpI~sw~~d~~D 445 (484)
.. ...-+|.+.++..-.-.+|
T Consensus 257 ~N-n~~YD~FVnvkrcp~P~~D 277 (297)
T PF05152_consen 257 SN-NYSYDYFVNVKRCPVPVND 277 (297)
T ss_pred cc-CccceeEEEeccCCCCchH
Confidence 54 4567777777776544443
No 48
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=97.22 E-value=0.00022 Score=66.16 Aligned_cols=92 Identities=23% Similarity=0.285 Sum_probs=73.8
Q ss_pred eeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeecceee-------eCCcccccccccCCCCC
Q 011504 342 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIF-------SDGTYTKDLTVLGVDLA 414 (484)
Q Consensus 342 V~lRPgL~eFLe~Lsk~YEIvIfTAs~~~YAd~ILd~LDP~~~lfs~rL~Re~C~~-------~~g~yiKDLs~LGrDls 414 (484)
+...||+.++|++|. +.++|.|++.+.++..+++.++... +|+..+..+.... .+..|.+-+.++|.+++
T Consensus 83 ~~~~~g~~~~L~~L~--~~~~i~Tn~~~~~~~~~l~~~gl~~-~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~ 159 (184)
T TIGR01993 83 LKPDPELRNLLLRLP--GRKIIFTNGDRAHARRALNRLGIED-CFDGIFCFDTANPDYLLPKPSPQAYEKALREAGVDPE 159 (184)
T ss_pred CCCCHHHHHHHHhCC--CCEEEEeCCCHHHHHHHHHHcCcHh-hhCeEEEeecccCccCCCCCCHHHHHHHHHHhCCCcc
Confidence 446799999999998 6899999999999999999998654 8888887655332 23366777888999999
Q ss_pred cEEEEECCchhhccCCCceeee
Q 011504 415 KVAIIDNSPQVFRLQVNNGIPI 436 (484)
Q Consensus 415 kVIIIDDsp~s~~~qp~NgIpI 436 (484)
++++|+|++.........|+..
T Consensus 160 ~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 160 RAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred ceEEEeCCHHHHHHHHHcCCEE
Confidence 9999999997766666666653
No 49
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=97.21 E-value=0.00073 Score=70.91 Aligned_cols=121 Identities=18% Similarity=0.208 Sum_probs=80.9
Q ss_pred CceEEEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhhc-ceEEEEEcCC-------------
Q 011504 302 KSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTAS------------- 367 (484)
Q Consensus 302 kK~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Lsk-~YEIvIfTAs------------- 367 (484)
+++.|+||-||||+...... |. ....-.+.+.||+.++|++|.+ .|.++|.|+.
T Consensus 1 ~~k~l~lDrDgtl~~~~~~~-----y~-------~~~~~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l 68 (354)
T PRK05446 1 MQKILFIDRDGTLIEEPPTD-----FQ-------VDSLDKLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDF 68 (354)
T ss_pred CCcEEEEeCCCCccCCCCcc-----cc-------ccCcccceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHH
Confidence 46799999999999864211 10 1122247889999999999984 6999999995
Q ss_pred --cHHHHHHHHHHhCCCCCceeEEEee-----cceeeeC---CcccccccccCCCCCcEEEEECCchhhccCCCceeeec
Q 011504 368 --QSIYAAQLLDILDPDGKLISRRVYR-----ESCIFSD---GTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIE 437 (484)
Q Consensus 368 --~~~YAd~ILd~LDP~~~lfs~rL~R-----e~C~~~~---g~yiKDLs~LGrDlskVIIIDDsp~s~~~qp~NgIpI~ 437 (484)
...++..+++.++. +|...++. +.|...+ +.+..-+..++.+++++++|-|+..-......+|+...
T Consensus 69 ~~~~~~i~~iL~~~gl---~fd~i~i~~~~~sd~~~~rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I 145 (354)
T PRK05446 69 DPPHNLMMQIFESQGI---KFDEVLICPHFPEDNCSCRKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGI 145 (354)
T ss_pred hhHHHHHHHHHHHcCC---ceeeEEEeCCcCcccCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEE
Confidence 24556666666654 35555554 3443321 12333345568899999999999876655666776644
No 50
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=97.18 E-value=0.00032 Score=67.73 Aligned_cols=95 Identities=17% Similarity=0.145 Sum_probs=73.4
Q ss_pred eeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeecceeeeC---CcccccccccCCCCCcEE
Q 011504 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVA 417 (484)
Q Consensus 342 V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~LDP~~~lfs~rL~Re~C~~~~---g~yiKDLs~LGrDlskVI 417 (484)
...-||+.+.|..++ +.|.+.|.|+.....++.+++.++-.. +|..++-.+.....+ ..+..-+..+|.+++++|
T Consensus 88 ~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~-~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l 166 (220)
T COG0546 88 SRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLAD-YFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEAL 166 (220)
T ss_pred CccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCcc-ccceEEcCCCCCCCCcCHHHHHHHHHHhCCChhheE
Confidence 467899999999999 679999999999999999999998876 787666633322222 234556677888877999
Q ss_pred EEECCchhhccCCCceeeec
Q 011504 418 IIDNSPQVFRLQVNNGIPIE 437 (484)
Q Consensus 418 IIDDsp~s~~~qp~NgIpI~ 437 (484)
+|=|+..-.......|++..
T Consensus 167 ~VGDs~~Di~aA~~Ag~~~v 186 (220)
T COG0546 167 MVGDSLNDILAAKAAGVPAV 186 (220)
T ss_pred EECCCHHHHHHHHHcCCCEE
Confidence 99999987766666665533
No 51
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=97.17 E-value=0.00039 Score=65.66 Aligned_cols=96 Identities=15% Similarity=0.134 Sum_probs=78.6
Q ss_pred eeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeecceeee---CCcccccccccCCCCCcEE
Q 011504 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFS---DGTYTKDLTVLGVDLAKVA 417 (484)
Q Consensus 342 V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~LDP~~~lfs~rL~Re~C~~~---~g~yiKDLs~LGrDlskVI 417 (484)
+...||+.++|+++. +.+.++|.|++...++..+++.++..+ +|...+..+.+... ...|.+-++.+|.++++++
T Consensus 74 ~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~-~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~l 152 (205)
T TIGR01454 74 VEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLP-LFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDAV 152 (205)
T ss_pred cccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChh-heeeEEecCcCCCCCCChHHHHHHHHHcCCChhheE
Confidence 677899999999998 579999999999999999999998875 78887776654322 2356667778899999999
Q ss_pred EEECCchhhccCCCceeeecc
Q 011504 418 IIDNSPQVFRLQVNNGIPIES 438 (484)
Q Consensus 418 IIDDsp~s~~~qp~NgIpI~s 438 (484)
+|+|++.-+.....+|++...
T Consensus 153 ~igD~~~Di~aA~~~Gi~~i~ 173 (205)
T TIGR01454 153 MVGDAVTDLASARAAGTATVA 173 (205)
T ss_pred EEcCCHHHHHHHHHcCCeEEE
Confidence 999999877777778887553
No 52
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=97.14 E-value=0.0015 Score=65.09 Aligned_cols=131 Identities=11% Similarity=0.081 Sum_probs=74.9
Q ss_pred CCCceEEEEecccccccccccc-cCCCCceEE--EEeccc--------cceeeeeeCchHHHHHHHhh-cceEEEEEcC-
Q 011504 300 GRKSVTLVLDLDETLVHSTLEY-CDDADFTFT--VFFNMK--------EHTVYVKQRPHLKTFLERVA-EMFEVVIFTA- 366 (484)
Q Consensus 300 ~~kK~tLVLDLDeTLVhSs~~~-~~~~Df~~~--v~~~~~--------~~~v~V~lRPgL~eFLe~Ls-k~YEIvIfTA- 366 (484)
.++++.++||+|||+++++... .....|.-. -.+... ....+....||+.+||+++. +.++|++-|+
T Consensus 60 ~~~p~av~~DIDeTvldnsp~~~~~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR 139 (237)
T PRK11009 60 GRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDMHVKRGDSIYFITGR 139 (237)
T ss_pred CCCCcEEEEECcCccccCCchheeeeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHHHHHCCCeEEEEeCC
Confidence 4556799999999999975211 111111000 000000 01234556666999999995 7899999999
Q ss_pred ---CcHHHHHHHHHHhCCC-CCceeEEEeecceeeeCCcccccccccCCCCCcEEEEECCchhhccCCCceeee
Q 011504 367 ---SQSIYAAQLLDILDPD-GKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPI 436 (484)
Q Consensus 367 ---s~~~YAd~ILd~LDP~-~~lfs~rL~Re~C~~~~g~yiKDLs~LGrDlskVIIIDDsp~s~~~qp~NgIpI 436 (484)
....+++.+++.++.. ..+|...+..+.. .... -..-+. ...-+|+|-|+..-+......|+..
T Consensus 140 ~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~-~K~~-K~~~l~----~~~i~I~IGDs~~Di~aA~~AGi~~ 207 (237)
T PRK11009 140 TATKTETVSKTLADDFHIPADNMNPVIFAGDKP-GQYT-KTQWLK----KKNIRIFYGDSDNDITAAREAGARG 207 (237)
T ss_pred CCcccHHHHHHHHHHcCCCcccceeEEEcCCCC-CCCC-HHHHHH----hcCCeEEEcCCHHHHHHHHHcCCcE
Confidence 4567899999877762 3366554444421 1111 011111 2233888999887665555555553
No 53
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=97.12 E-value=0.00049 Score=64.73 Aligned_cols=97 Identities=15% Similarity=0.123 Sum_probs=77.2
Q ss_pred eeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeecceeee---CCcccccccccCCCCCcEE
Q 011504 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFS---DGTYTKDLTVLGVDLAKVA 417 (484)
Q Consensus 342 V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~LDP~~~lfs~rL~Re~C~~~---~g~yiKDLs~LGrDlskVI 417 (484)
+.++||+.++|+.+. +.+.++|.|++.+.+++.+++.++-.+ +|...+..+..... ...|.+-++.+|.++++++
T Consensus 84 ~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~ 162 (213)
T TIGR01449 84 TSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAK-YFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQQMV 162 (213)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHh-hCcEEEecCCCCCCCCChHHHHHHHHHcCCChhHeE
Confidence 578999999999998 569999999999999999999998765 78776665543222 2246677888999999999
Q ss_pred EEECCchhhccCCCceeeeccc
Q 011504 418 IIDNSPQVFRLQVNNGIPIESW 439 (484)
Q Consensus 418 IIDDsp~s~~~qp~NgIpI~sw 439 (484)
+|+|++.-+......|++....
T Consensus 163 ~igDs~~d~~aa~~aG~~~i~v 184 (213)
T TIGR01449 163 YVGDSRVDIQAARAAGCPSVLL 184 (213)
T ss_pred EeCCCHHHHHHHHHCCCeEEEE
Confidence 9999998776666677776543
No 54
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=97.11 E-value=0.00053 Score=64.28 Aligned_cols=94 Identities=15% Similarity=0.184 Sum_probs=75.5
Q ss_pred eeeCchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeecceeee---CCcccccccccCCCCCcEE
Q 011504 342 VKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFS---DGTYTKDLTVLGVDLAKVA 417 (484)
Q Consensus 342 V~lRPgL~eFLe~Lsk-~YEIvIfTAs~~~YAd~ILd~LDP~~~lfs~rL~Re~C~~~---~g~yiKDLs~LGrDlskVI 417 (484)
+...||+.++|+++++ .|.++|.|++...++..+++.++-.. +|...+..++.... ...|.+-++.+|.++++++
T Consensus 91 ~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~-~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~~ 169 (198)
T TIGR01428 91 LPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDD-PFDAVLSADAVRAYKPAPQVYQLALEALGVPPDEVL 169 (198)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChh-hhheeEehhhcCCCCCCHHHHHHHHHHhCCChhhEE
Confidence 5578999999999996 59999999999999999999987653 78888877654332 2356677788899999999
Q ss_pred EEECCchhhccCCCceeee
Q 011504 418 IIDNSPQVFRLQVNNGIPI 436 (484)
Q Consensus 418 IIDDsp~s~~~qp~NgIpI 436 (484)
+|+|++.-.......|+..
T Consensus 170 ~vgD~~~Di~~A~~~G~~~ 188 (198)
T TIGR01428 170 FVASNPWDLGGAKKFGFKT 188 (198)
T ss_pred EEeCCHHHHHHHHHCCCcE
Confidence 9999997665555666654
No 55
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=97.09 E-value=0.0005 Score=64.92 Aligned_cols=94 Identities=14% Similarity=0.099 Sum_probs=76.1
Q ss_pred eeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeecceeeeC---Cccccccccc-CCCCCcEE
Q 011504 342 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVL-GVDLAKVA 417 (484)
Q Consensus 342 V~lRPgL~eFLe~Lsk~YEIvIfTAs~~~YAd~ILd~LDP~~~lfs~rL~Re~C~~~~---g~yiKDLs~L-GrDlskVI 417 (484)
+.++||+.++|+++.+.+.++|-|++...+++.+++.++-.+ +|+..+..+.....+ ..|.+-++++ |.+++++|
T Consensus 96 ~~~~~g~~~~L~~l~~~~~~~i~Sn~~~~~~~~~l~~~~l~~-~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~v 174 (224)
T TIGR02254 96 HQLLPGAFELMENLQQKFRLYIVTNGVRETQYKRLRKSGLFP-FFDDIFVSEDAGIQKPDKEIFNYALERMPKFSKEEVL 174 (224)
T ss_pred CeeCccHHHHHHHHHhcCcEEEEeCCchHHHHHHHHHCCcHh-hcCEEEEcCccCCCCCCHHHHHHHHHHhcCCCchheE
Confidence 578999999999999769999999999999999999988765 788888766654332 3567778889 99999999
Q ss_pred EEECCc-hhhccCCCceeee
Q 011504 418 IIDNSP-QVFRLQVNNGIPI 436 (484)
Q Consensus 418 IIDDsp-~s~~~qp~NgIpI 436 (484)
+|+|++ .-......+|++.
T Consensus 175 ~igD~~~~di~~A~~~G~~~ 194 (224)
T TIGR02254 175 MIGDSLTADIKGGQNAGLDT 194 (224)
T ss_pred EECCCcHHHHHHHHHCCCcE
Confidence 999997 4555555566554
No 56
>PLN02954 phosphoserine phosphatase
Probab=97.06 E-value=0.00032 Score=66.91 Aligned_cols=92 Identities=9% Similarity=0.129 Sum_probs=60.7
Q ss_pred eeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCC-CceeEEEeecc-------------eee-eCCc-ccc
Q 011504 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDG-KLISRRVYRES-------------CIF-SDGT-YTK 404 (484)
Q Consensus 342 V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~LDP~~-~lfs~rL~Re~-------------C~~-~~g~-yiK 404 (484)
..++||+.++|+++. +.+.++|-|++.+.+++.+++.++-.. .+|...+.-+. |.. .+.. +.+
T Consensus 83 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~~ 162 (224)
T PLN02954 83 PRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQH 162 (224)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHHH
Confidence 457899999999998 569999999999999999999987653 35654433111 100 0000 111
Q ss_pred cccccCCCCCcEEEEECCchhhccCCCceee
Q 011504 405 DLTVLGVDLAKVAIIDNSPQVFRLQVNNGIP 435 (484)
Q Consensus 405 DLs~LGrDlskVIIIDDsp~s~~~qp~NgIp 435 (484)
-+..+| .+++|.|-|++.-......+|+.
T Consensus 163 ~~~~~~--~~~~i~iGDs~~Di~aa~~~~~~ 191 (224)
T PLN02954 163 IKKKHG--YKTMVMIGDGATDLEARKPGGAD 191 (224)
T ss_pred HHHHcC--CCceEEEeCCHHHHHhhhcCCCC
Confidence 112234 46899999999877665444444
No 57
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=97.02 E-value=0.0006 Score=64.40 Aligned_cols=101 Identities=13% Similarity=0.139 Sum_probs=77.7
Q ss_pred eeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeecceeee---CCcccccccccCCCCCcEE
Q 011504 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFS---DGTYTKDLTVLGVDLAKVA 417 (484)
Q Consensus 342 V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~LDP~~~lfs~rL~Re~C~~~---~g~yiKDLs~LGrDlskVI 417 (484)
...+||+.++|+.+. +.|.++|.|++.+..+..++........+|...++.+++... ...|.+-++.+|.++++++
T Consensus 83 ~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l 162 (199)
T PRK09456 83 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFSAADAV 162 (199)
T ss_pred hccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCChhHeE
Confidence 457899999999998 569999999999887766554422223478888877665543 2356777889999999999
Q ss_pred EEECCchhhccCCCceeeeccccCC
Q 011504 418 IIDNSPQVFRLQVNNGIPIESWFDD 442 (484)
Q Consensus 418 IIDDsp~s~~~qp~NgIpI~sw~~d 442 (484)
+|||++.........|+...-+.+.
T Consensus 163 ~vgD~~~di~aA~~aG~~~i~~~~~ 187 (199)
T PRK09456 163 FFDDNADNIEAANALGITSILVTDK 187 (199)
T ss_pred EeCCCHHHHHHHHHcCCEEEEecCC
Confidence 9999998887777888887655543
No 58
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=96.99 E-value=0.00054 Score=66.15 Aligned_cols=49 Identities=20% Similarity=0.314 Sum_probs=43.0
Q ss_pred eeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEe
Q 011504 342 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVY 391 (484)
Q Consensus 342 V~lRPgL~eFLe~Lsk~YEIvIfTAs~~~YAd~ILd~LDP~~~lfs~rL~ 391 (484)
+.++||+.+||+++.+.+.++|-|++...+++++++.++-.. +|..++-
T Consensus 67 i~l~pga~ell~~lk~~~~~~IVS~~~~~~~~~il~~lgi~~-~~an~l~ 115 (203)
T TIGR02137 67 LKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPT-LLCHKLE 115 (203)
T ss_pred CCCCccHHHHHHHHHhCCeEEEEeCChHHHHHHHHHHcCCch-hhceeeE
Confidence 578999999999999878999999999999999999998774 6665554
No 59
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=96.96 E-value=0.00093 Score=63.96 Aligned_cols=101 Identities=14% Similarity=0.078 Sum_probs=81.6
Q ss_pred eeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeecceeeeC---CcccccccccCCCCCcEE
Q 011504 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVA 417 (484)
Q Consensus 342 V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~LDP~~~lfs~rL~Re~C~~~~---g~yiKDLs~LGrDlskVI 417 (484)
+.+.||+.++|+++. +.|.++|.|++...+++.+++.+.-.+ +|...+.++.....+ ..|..-++.+|.++++++
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~ 169 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRD-YFDALASAEKLPYSKPHPEVYLNCAAKLGVDPLTCV 169 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchh-cccEEEEcccCCCCCCCHHHHHHHHHHcCCCHHHeE
Confidence 567899999999998 569999999999999999999988765 788877766543222 256677788899999999
Q ss_pred EEECCchhhccCCCceeeeccccCCC
Q 011504 418 IIDNSPQVFRLQVNNGIPIESWFDDP 443 (484)
Q Consensus 418 IIDDsp~s~~~qp~NgIpI~sw~~d~ 443 (484)
+|+|++.-.......|++..-+....
T Consensus 170 ~igDs~~Di~aA~~aG~~~i~v~~~~ 195 (222)
T PRK10826 170 ALEDSFNGMIAAKAARMRSIVVPAPE 195 (222)
T ss_pred EEcCChhhHHHHHHcCCEEEEecCCc
Confidence 99999988877777888776555433
No 60
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=96.94 E-value=0.00099 Score=61.24 Aligned_cols=112 Identities=19% Similarity=0.154 Sum_probs=74.1
Q ss_pred eEEEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCC
Q 011504 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPD 382 (484)
Q Consensus 304 ~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~LDP~ 382 (484)
+.++||+||||+.-.... ..+ ....-++.++|+. -|++|. +.+.++|-|+..+..+..+++.+...
T Consensus 2 ~~~~~D~Dgtl~~~~~~~----------~~~-~~~~~~~~~~~~~--~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~ 68 (154)
T TIGR01670 2 RLLILDVDGVLTDGKIYY----------TNN-GEEIKAFNVRDGY--GIRCALKSGIEVAIITGRKAKLVEDRCKTLGIT 68 (154)
T ss_pred eEEEEeCceeEEcCeEEE----------CCC-CcEEEEEechhHH--HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCC
Confidence 478999999999532110 001 1112234667776 688888 57999999999999999999998865
Q ss_pred CCceeEEEeecceeeeCCcccccccccCCCCCcEEEEECCchhhccCCCceee
Q 011504 383 GKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIP 435 (484)
Q Consensus 383 ~~lfs~rL~Re~C~~~~g~yiKDLs~LGrDlskVIIIDDsp~s~~~qp~NgIp 435 (484)
. +|... ......+.+-+..+|.++++++.|-|+..-...-...|+.
T Consensus 69 ~-~~~~~------~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~ 114 (154)
T TIGR01670 69 H-LYQGQ------SNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEKVGLS 114 (154)
T ss_pred E-EEecc------cchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCe
Confidence 3 44321 1112233444566788999999999998765544445554
No 61
>PRK09449 dUMP phosphatase; Provisional
Probab=96.94 E-value=0.00092 Score=63.73 Aligned_cols=93 Identities=15% Similarity=0.141 Sum_probs=73.8
Q ss_pred eeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeecceeee---CCcccccccccCC-CCCcEE
Q 011504 342 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFS---DGTYTKDLTVLGV-DLAKVA 417 (484)
Q Consensus 342 V~lRPgL~eFLe~Lsk~YEIvIfTAs~~~YAd~ILd~LDP~~~lfs~rL~Re~C~~~---~g~yiKDLs~LGr-DlskVI 417 (484)
+...||+.++|++|.+.|.++|.|++.+.+++.+++.++..+ +|...+..+++... ...|.+-++.+|. +.++++
T Consensus 94 ~~~~~g~~~~L~~L~~~~~~~i~Tn~~~~~~~~~l~~~~l~~-~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~ 172 (224)
T PRK09449 94 CTPLPGAVELLNALRGKVKMGIITNGFTELQQVRLERTGLRD-YFDLLVISEQVGVAKPDVAIFDYALEQMGNPDRSRVL 172 (224)
T ss_pred CccCccHHHHHHHHHhCCeEEEEeCCcHHHHHHHHHhCChHH-HcCEEEEECccCCCCCCHHHHHHHHHHcCCCCcccEE
Confidence 467899999999999889999999999999999999988775 79888887765433 2356777888886 457899
Q ss_pred EEECCch-hhccCCCceee
Q 011504 418 IIDNSPQ-VFRLQVNNGIP 435 (484)
Q Consensus 418 IIDDsp~-s~~~qp~NgIp 435 (484)
+|+|++. -.......|+.
T Consensus 173 ~vgD~~~~Di~~A~~aG~~ 191 (224)
T PRK09449 173 MVGDNLHSDILGGINAGID 191 (224)
T ss_pred EEcCCcHHHHHHHHHCCCc
Confidence 9999973 45444455554
No 62
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=96.85 E-value=0.00081 Score=61.76 Aligned_cols=92 Identities=16% Similarity=0.192 Sum_probs=72.4
Q ss_pred eeeCchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeecceeee---CCcccccccccCCCCCcEE
Q 011504 342 VKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFS---DGTYTKDLTVLGVDLAKVA 417 (484)
Q Consensus 342 V~lRPgL~eFLe~Lsk-~YEIvIfTAs~~~YAd~ILd~LDP~~~lfs~rL~Re~C~~~---~g~yiKDLs~LGrDlskVI 417 (484)
+...||+.++|+.+.+ .+.++|-|++ .+++.+++.++-.+ +|..++..+..... ...|.+-++.+|..++++|
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~-~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v 163 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTD-YFDAIVDADEVKEGKPHPETFLLAAELLGVSPNECV 163 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHH-HCCEeeehhhCCCCCCChHHHHHHHHHcCCCHHHeE
Confidence 5789999999999985 5999999988 78999999887765 78888776554322 2245666778899999999
Q ss_pred EEECCchhhccCCCceeee
Q 011504 418 IIDNSPQVFRLQVNNGIPI 436 (484)
Q Consensus 418 IIDDsp~s~~~qp~NgIpI 436 (484)
+|+|++.-......+|++.
T Consensus 164 ~IgD~~~di~aA~~~G~~~ 182 (185)
T TIGR02009 164 VFEDALAGVQAARAAGMFA 182 (185)
T ss_pred EEeCcHhhHHHHHHCCCeE
Confidence 9999998776666677654
No 63
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=96.84 E-value=0.0029 Score=57.36 Aligned_cols=73 Identities=19% Similarity=0.155 Sum_probs=53.9
Q ss_pred eEEEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhh-cceEEEEEcCCcHHHHH---------
Q 011504 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAA--------- 373 (484)
Q Consensus 304 ~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd--------- 373 (484)
+.+++||||||++.... .|. .....|.+.+.|+++. +.++|+++|+-......
T Consensus 2 K~i~~DiDGTL~~~~~~-----~y~------------~~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~ 64 (126)
T TIGR01689 2 KRLVMDLDNTITLTENG-----DYA------------NVAPILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIH 64 (126)
T ss_pred CEEEEeCCCCcccCCCC-----ccc------------ccccCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchh
Confidence 47999999999754200 010 1346788999999984 78999999999888876
Q ss_pred ---HHHHHhCCCCCceeEEEeec
Q 011504 374 ---QLLDILDPDGKLISRRVYRE 393 (484)
Q Consensus 374 ---~ILd~LDP~~~lfs~rL~Re 393 (484)
.+++.|+.++-.+...+.|.
T Consensus 65 ~~~~t~~wL~k~~ipYd~l~~~k 87 (126)
T TIGR01689 65 TLPIIILWLNQHNVPYDEIYVGK 87 (126)
T ss_pred hHHHHHHHHHHcCCCCceEEeCC
Confidence 77888888776666666654
No 64
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=96.81 E-value=0.0018 Score=68.64 Aligned_cols=98 Identities=10% Similarity=0.088 Sum_probs=81.6
Q ss_pred eeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeecceeeeC---CcccccccccCCCCCcEE
Q 011504 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVA 417 (484)
Q Consensus 342 V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~LDP~~~lfs~rL~Re~C~~~~---g~yiKDLs~LGrDlskVI 417 (484)
+.+.||+.+||+.|. +.+.++|-|++.+.+++.+++.++..+ ||+..+..+++...+ ..|.+-+..+|.+++++|
T Consensus 215 ~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~-yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~Peecl 293 (381)
T PLN02575 215 YRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRG-FFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPERCI 293 (381)
T ss_pred CCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHH-HceEEEecCcCCCCCCCHHHHHHHHHHcCCCcccEE
Confidence 457899999999998 569999999999999999999998775 899988887764332 257788889999999999
Q ss_pred EEECCchhhccCCCceeeecccc
Q 011504 418 IIDNSPQVFRLQVNNGIPIESWF 440 (484)
Q Consensus 418 IIDDsp~s~~~qp~NgIpI~sw~ 440 (484)
+|+|++.-.......|+......
T Consensus 294 ~IGDS~~DIeAAk~AGm~~IgV~ 316 (381)
T PLN02575 294 VFGNSNQTVEAAHDARMKCVAVA 316 (381)
T ss_pred EEcCCHHHHHHHHHcCCEEEEEC
Confidence 99999988776667777655543
No 65
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=96.80 E-value=0.0021 Score=70.71 Aligned_cols=109 Identities=12% Similarity=0.161 Sum_probs=72.3
Q ss_pred CCceEEEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhh-cceEEEEEcCCcH----------
Q 011504 301 RKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQS---------- 369 (484)
Q Consensus 301 ~kK~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~---------- 369 (484)
.+.+++.||+||||+...... .| ...... +..+-||+.+.|++|. +.|.|+|+|+...
T Consensus 166 ~~~Kia~fD~DGTLi~t~sg~----~~------~~~~~d-~~~l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~ 234 (526)
T TIGR01663 166 GQEKIAGFDLDGTIIKTKSGK----VF------PKGPDD-WQIIFPEIPEKLKELEADGFKICIFTNQGGIARGKINADD 234 (526)
T ss_pred ccCcEEEEECCCCccccCCCc----cC------CCCHHH-eeecccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHH
Confidence 345799999999999753110 01 001111 2224699999999998 5699999999776
Q ss_pred --HHHHHHHHHhCCCCCceeEEEeecceeee---CCccccccccc----CCCCCcEEEEECCc
Q 011504 370 --IYAAQLLDILDPDGKLISRRVYRESCIFS---DGTYTKDLTVL----GVDLAKVAIIDNSP 423 (484)
Q Consensus 370 --~YAd~ILd~LDP~~~lfs~rL~Re~C~~~---~g~yiKDLs~L----GrDlskVIIIDDsp 423 (484)
..+..+++.++. .|...+..+.|.+. .|.+..-+..+ +.+++++++|-|+.
T Consensus 235 ~~~ki~~iL~~lgi---pfdviia~~~~~~RKP~pGm~~~a~~~~~~~~~Id~~~S~~VGDaa 294 (526)
T TIGR01663 235 FKAKIEAIVAKLGV---PFQVFIAIGAGFYRKPLTGMWDHLKEEANDGTEIQEDDCFFVGDAA 294 (526)
T ss_pred HHHHHHHHHHHcCC---ceEEEEeCCCCCCCCCCHHHHHHHHHhcCcccCCCHHHeEEeCCcc
Confidence 568888888875 36654444454443 23443333334 57899999999997
No 66
>PRK11587 putative phosphatase; Provisional
Probab=96.79 E-value=0.0023 Score=61.23 Aligned_cols=97 Identities=12% Similarity=0.080 Sum_probs=75.8
Q ss_pred eeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeecceeee---CCcccccccccCCCCCcEE
Q 011504 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFS---DGTYTKDLTVLGVDLAKVA 417 (484)
Q Consensus 342 V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~LDP~~~lfs~rL~Re~C~~~---~g~yiKDLs~LGrDlskVI 417 (484)
+.+.||+.++|++|. +.+.++|-|++...++..+++..... +|...+..++.... ...|.+-+..+|..++++|
T Consensus 82 ~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~--~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~p~~~l 159 (218)
T PRK11587 82 ITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLP--APEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQECV 159 (218)
T ss_pred ceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCC--CccEEEEHHHhcCCCCCcHHHHHHHHHcCCCcccEE
Confidence 567899999999998 67999999999999988888877652 45566665554322 2357788888999999999
Q ss_pred EEECCchhhccCCCceeeecccc
Q 011504 418 IIDNSPQVFRLQVNNGIPIESWF 440 (484)
Q Consensus 418 IIDDsp~s~~~qp~NgIpI~sw~ 440 (484)
+|+|++.-.......|++...+.
T Consensus 160 ~igDs~~di~aA~~aG~~~i~v~ 182 (218)
T PRK11587 160 VVEDAPAGVLSGLAAGCHVIAVN 182 (218)
T ss_pred EEecchhhhHHHHHCCCEEEEEC
Confidence 99999987777777787655443
No 67
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=96.78 E-value=0.001 Score=61.51 Aligned_cols=95 Identities=15% Similarity=0.148 Sum_probs=76.2
Q ss_pred eeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeecceeeeCC---cccccccccCCCCCcEEE
Q 011504 342 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVAI 418 (484)
Q Consensus 342 V~lRPgL~eFLe~Lsk~YEIvIfTAs~~~YAd~ILd~LDP~~~lfs~rL~Re~C~~~~g---~yiKDLs~LGrDlskVII 418 (484)
+..-|+ .+.|+++.+.+.++|-|++.+.+++.+++.++-.+ +|...+..++....+. .|.+-++++|.+++++|+
T Consensus 87 ~~~~~~-~e~L~~L~~~~~l~I~T~~~~~~~~~~l~~~~l~~-~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~ 164 (188)
T PRK10725 87 VEPLPL-IEVVKAWHGRRPMAVGTGSESAIAEALLAHLGLRR-YFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQCVV 164 (188)
T ss_pred CCCccH-HHHHHHHHhCCCEEEEcCCchHHHHHHHHhCCcHh-HceEEEehhhccCCCCChHHHHHHHHHcCCCHHHeEE
Confidence 345576 48899998779999999999999999999998765 8998888776643322 467777889999999999
Q ss_pred EECCchhhccCCCceeeecc
Q 011504 419 IDNSPQVFRLQVNNGIPIES 438 (484)
Q Consensus 419 IDDsp~s~~~qp~NgIpI~s 438 (484)
|+|++.-+......|++...
T Consensus 165 igDs~~di~aA~~aG~~~i~ 184 (188)
T PRK10725 165 FEDADFGIQAARAAGMDAVD 184 (188)
T ss_pred EeccHhhHHHHHHCCCEEEe
Confidence 99999888777777776543
No 68
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=96.71 E-value=0.0019 Score=63.08 Aligned_cols=98 Identities=12% Similarity=0.015 Sum_probs=77.9
Q ss_pred eeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeecceeee---CCcccccccccCC-CCCcE
Q 011504 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFS---DGTYTKDLTVLGV-DLAKV 416 (484)
Q Consensus 342 V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~LDP~~~lfs~rL~Re~C~~~---~g~yiKDLs~LGr-DlskV 416 (484)
+.+.||+.++|++|. +.+.++|-|++.+.+++.+++.++..+.+|...+..+..... ...|.+-++++|. +++++
T Consensus 98 ~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~ 177 (253)
T TIGR01422 98 SSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTDDVPAGRPAPWMALKNAIELGVYDVAAC 177 (253)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccccCCCCCCCHHHHHHHHHHcCCCCchhe
Confidence 467899999999998 569999999999999999999998776324666666654322 2356777888997 48999
Q ss_pred EEEECCchhhccCCCceeeeccc
Q 011504 417 AIIDNSPQVFRLQVNNGIPIESW 439 (484)
Q Consensus 417 IIIDDsp~s~~~qp~NgIpI~sw 439 (484)
|+|.|++.-+......|+.....
T Consensus 178 l~IGDs~~Di~aA~~aGi~~i~v 200 (253)
T TIGR01422 178 VKVGDTVPDIEEGRNAGMWTVGL 200 (253)
T ss_pred EEECCcHHHHHHHHHCCCeEEEE
Confidence 99999998777777778776655
No 69
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=96.52 E-value=0.0034 Score=59.47 Aligned_cols=93 Identities=17% Similarity=0.214 Sum_probs=72.1
Q ss_pred eeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeecceeee---CCcccccccccCCCCCcEE
Q 011504 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFS---DGTYTKDLTVLGVDLAKVA 417 (484)
Q Consensus 342 V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~LDP~~~lfs~rL~Re~C~~~---~g~yiKDLs~LGrDlskVI 417 (484)
...+||+.+||+.+. +.+.++|.|++...++..+++.++..+ +|...+..+..... ...|.+-+..++.++++++
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i 170 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIAD-YFSVVIGGDSLPNKKPDPAPLLLACEKLGLDPEEML 170 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCcc-CccEEEcCCCCCCCCcChHHHHHHHHHcCCChhheE
Confidence 668999999999999 569999999999999999999998754 67665554443211 1235566778899999999
Q ss_pred EEECCchhhccCCCceee
Q 011504 418 IIDNSPQVFRLQVNNGIP 435 (484)
Q Consensus 418 IIDDsp~s~~~qp~NgIp 435 (484)
+|+|++.-.......|++
T Consensus 171 ~igD~~~Di~~a~~~g~~ 188 (226)
T PRK13222 171 FVGDSRNDIQAARAAGCP 188 (226)
T ss_pred EECCCHHHHHHHHHCCCc
Confidence 999998777655556664
No 70
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=96.48 E-value=0.0013 Score=68.16 Aligned_cols=95 Identities=15% Similarity=0.179 Sum_probs=65.8
Q ss_pred eeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeecceee----------e--CCccc-cccc
Q 011504 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIF----------S--DGTYT-KDLT 407 (484)
Q Consensus 342 V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~LDP~~~lfs~rL~Re~C~~----------~--~g~yi-KDLs 407 (484)
+.++||+.++|+++. ..+.++|.|++...+++.+++.++... .+...+--..-.+ . +...+ +=++
T Consensus 180 l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~-~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~la~ 258 (322)
T PRK11133 180 LPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDA-AVANELEIMDGKLTGNVLGDIVDAQYKADTLTRLAQ 258 (322)
T ss_pred CCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCe-EEEeEEEEECCEEEeEecCccCCcccHHHHHHHHHH
Confidence 678999999999999 459999999999999999999987754 3333332111000 0 11112 2234
Q ss_pred ccCCCCCcEEEEECCchhhccCCCceeeec
Q 011504 408 VLGVDLAKVAIIDNSPQVFRLQVNNGIPIE 437 (484)
Q Consensus 408 ~LGrDlskVIIIDDsp~s~~~qp~NgIpI~ 437 (484)
.+|.+++++|.|-|+..-...-..-|+.|.
T Consensus 259 ~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA 288 (322)
T PRK11133 259 EYEIPLAQTVAIGDGANDLPMIKAAGLGIA 288 (322)
T ss_pred HcCCChhhEEEEECCHHHHHHHHHCCCeEE
Confidence 678899999999999976655445566554
No 71
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=96.44 E-value=0.0061 Score=56.56 Aligned_cols=94 Identities=13% Similarity=0.143 Sum_probs=66.9
Q ss_pred eeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeeccee-eeCC------------ccccccc
Q 011504 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCI-FSDG------------TYTKDLT 407 (484)
Q Consensus 342 V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~LDP~~~lfs~rL~Re~C~-~~~g------------~yiKDLs 407 (484)
+.++||+.++|+++. +.+.++|.|++...+++.+++.+.... +|...+..+... .... .+.+-+.
T Consensus 79 ~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~-~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~~~ 157 (201)
T TIGR01491 79 ISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDY-VYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERLKR 157 (201)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCe-EEEEEEEEcCCCeEecceeeEEccccHHHHHHHHHH
Confidence 678999999999998 569999999999999999999998664 666555432211 1111 1112234
Q ss_pred ccCCCCCcEEEEECCchhhccCCCceeee
Q 011504 408 VLGVDLAKVAIIDNSPQVFRLQVNNGIPI 436 (484)
Q Consensus 408 ~LGrDlskVIIIDDsp~s~~~qp~NgIpI 436 (484)
.+|.+++++++|.|+..-...-...|+++
T Consensus 158 ~~~~~~~~~i~iGDs~~D~~~a~~ag~~~ 186 (201)
T TIGR01491 158 ELNPSLTETVAVGDSKNDLPMFEVADISI 186 (201)
T ss_pred HhCCCHHHEEEEcCCHhHHHHHHhcCCeE
Confidence 56888999999999986555444455544
No 72
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=96.39 E-value=0.004 Score=62.41 Aligned_cols=94 Identities=13% Similarity=0.139 Sum_probs=73.6
Q ss_pred eeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeecceeeeC---CcccccccccCCCCCcEE
Q 011504 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVA 417 (484)
Q Consensus 342 V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~LDP~~~lfs~rL~Re~C~~~~---g~yiKDLs~LGrDlskVI 417 (484)
+..+||+.++|+++. +.+.++|.|++...++..+++.++-.+ +|...+..+.+...+ ..|.+-+.++|.+++++|
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~-~f~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~l 178 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGR-YFRWIIGGDTLPQKKPDPAALLFVMKMAGVPPSQSL 178 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHh-hCeEEEecCCCCCCCCCcHHHHHHHHHhCCChhHEE
Confidence 457899999999998 579999999999999999999987654 787766655433221 235566677899999999
Q ss_pred EEECCchhhccCCCceeee
Q 011504 418 IIDNSPQVFRLQVNNGIPI 436 (484)
Q Consensus 418 IIDDsp~s~~~qp~NgIpI 436 (484)
+|+|++.-......+|+..
T Consensus 179 ~IGD~~~Di~aA~~aGi~~ 197 (272)
T PRK13223 179 FVGDSRSDVLAAKAAGVQC 197 (272)
T ss_pred EECCCHHHHHHHHHCCCeE
Confidence 9999998776666677753
No 73
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=96.35 E-value=0.0066 Score=59.43 Aligned_cols=95 Identities=11% Similarity=0.077 Sum_probs=63.3
Q ss_pred ceEEEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhh-cceEEEEEcCCcHHHHH--HHHHHh
Q 011504 303 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAA--QLLDIL 379 (484)
Q Consensus 303 K~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd--~ILd~L 379 (484)
-..++||+||||.+.. ..-||+.++|++|. +.+.++|.|++.+..++ +.++.+
T Consensus 8 ~~~~~~D~dG~l~~~~------------------------~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~ 63 (242)
T TIGR01459 8 YDVFLLDLWGVIIDGN------------------------HTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSL 63 (242)
T ss_pred CCEEEEecccccccCC------------------------ccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHC
Confidence 3478999999998642 24699999999998 57999999999988777 778888
Q ss_pred CCCCCceeEEEeecceeeeCCcccccccccCCCCCcEEEEECCc
Q 011504 380 DPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSP 423 (484)
Q Consensus 380 DP~~~lfs~rL~Re~C~~~~g~yiKDLs~LGrDlskVIIIDDsp 423 (484)
+....+|...+....... ..+..-++.+|...+++++|-|..
T Consensus 64 gl~~~~~~~Ii~s~~~~~--~~l~~~~~~~~~~~~~~~~vGd~~ 105 (242)
T TIGR01459 64 GINADLPEMIISSGEIAV--QMILESKKRFDIRNGIIYLLGHLE 105 (242)
T ss_pred CCCccccceEEccHHHHH--HHHHhhhhhccCCCceEEEeCCcc
Confidence 765325666666443211 111111233444455566666544
No 74
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=96.33 E-value=0.0054 Score=57.95 Aligned_cols=115 Identities=16% Similarity=0.124 Sum_probs=71.4
Q ss_pred CceEEEEeccccccccc-ccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHh
Q 011504 302 KSVTLVLDLDETLVHST-LEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDIL 379 (484)
Q Consensus 302 kK~tLVLDLDeTLVhSs-~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~L 379 (484)
+.+.+|+|+||||+... +..... .....+.. |.+ .=++.+. +.++++|-|......+..+++.+
T Consensus 20 ~ikli~~D~Dgtl~~~~i~~~~~~-----------~~~~~~~~-~d~--~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~l 85 (183)
T PRK09484 20 NIRLLICDVDGVFSDGLIYMGNNG-----------EELKAFNV-RDG--YGIRCLLTSGIEVAIITGRKSKLVEDRMTTL 85 (183)
T ss_pred CceEEEEcCCeeeecCEEEEcCCC-----------CEEEEEec-cch--HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHc
Confidence 46799999999999753 111110 00111111 221 1233333 67999999999999999999998
Q ss_pred CCCCCceeEEEeecceeeeCCcccccccccCCCCCcEEEEECCchhhccCCCceeeec
Q 011504 380 DPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIE 437 (484)
Q Consensus 380 DP~~~lfs~rL~Re~C~~~~g~yiKDLs~LGrDlskVIIIDDsp~s~~~qp~NgIpI~ 437 (484)
.... +|. .+.-....+.+-+..+|.++++++.|-|+..-...-...|+.+.
T Consensus 86 gl~~-~f~------g~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~ 136 (183)
T PRK09484 86 GITH-LYQ------GQSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVA 136 (183)
T ss_pred CCce-eec------CCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEe
Confidence 7653 442 11111223445566789999999999999876655445566543
No 75
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=96.31 E-value=0.0062 Score=60.33 Aligned_cols=98 Identities=12% Similarity=0.056 Sum_probs=76.6
Q ss_pred eeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeecceeee---CCcccccccccCCC-CCcE
Q 011504 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFS---DGTYTKDLTVLGVD-LAKV 416 (484)
Q Consensus 342 V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~LDP~~~lfs~rL~Re~C~~~---~g~yiKDLs~LGrD-lskV 416 (484)
+.+-||+.++|++|. +.+.++|-|++.+..+..+++.+...+-+|...+..++.... ...|.+-++++|.. ++++
T Consensus 100 ~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~~e~ 179 (267)
T PRK13478 100 ATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTDDVPAGRPYPWMALKNAIELGVYDVAAC 179 (267)
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcCCcCCCCCCChHHHHHHHHHcCCCCCcce
Confidence 467899999999998 569999999999999999999887665334666666654332 23567778889975 6899
Q ss_pred EEEECCchhhccCCCceeeeccc
Q 011504 417 AIIDNSPQVFRLQVNNGIPIESW 439 (484)
Q Consensus 417 IIIDDsp~s~~~qp~NgIpI~sw 439 (484)
|+|+|++.-+......|++....
T Consensus 180 l~IGDs~~Di~aA~~aG~~~i~v 202 (267)
T PRK13478 180 VKVDDTVPGIEEGLNAGMWTVGV 202 (267)
T ss_pred EEEcCcHHHHHHHHHCCCEEEEE
Confidence 99999998777777777765544
No 76
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=96.29 E-value=0.002 Score=60.93 Aligned_cols=98 Identities=18% Similarity=0.105 Sum_probs=70.8
Q ss_pred eeeCchHHHHHHHhh-cceEEEEEcCCcHHH--HHHHHHHhCCCCCceeEEEeecceeee---CCcccccccccCCCCCc
Q 011504 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIY--AAQLLDILDPDGKLISRRVYRESCIFS---DGTYTKDLTVLGVDLAK 415 (484)
Q Consensus 342 V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~Y--Ad~ILd~LDP~~~lfs~rL~Re~C~~~---~g~yiKDLs~LGrDlsk 415 (484)
+.+.||+.++|++|. +.|.++|.|++...+ +...+..++.. .+|...+..+..... ...|.+-++++|.++++
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~-~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~~~~ 171 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIM-ALFDAVVESCLEGLRKPDPRIYQLMLERLGVAPEE 171 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhH-hhCCEEEEeeecCCCCCCHHHHHHHHHHcCCCHHH
Confidence 567899999999998 469999999987654 32223223322 368777765544322 33567778889999999
Q ss_pred EEEEECCchhhccCCCceeeecccc
Q 011504 416 VAIIDNSPQVFRLQVNNGIPIESWF 440 (484)
Q Consensus 416 VIIIDDsp~s~~~qp~NgIpI~sw~ 440 (484)
+++|||++.........|+...-+.
T Consensus 172 ~l~i~D~~~di~aA~~aG~~~i~v~ 196 (211)
T TIGR02247 172 CVFLDDLGSNLKPAAALGITTIKVS 196 (211)
T ss_pred eEEEcCCHHHHHHHHHcCCEEEEEC
Confidence 9999999988877777788765544
No 77
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=96.28 E-value=0.0033 Score=59.76 Aligned_cols=95 Identities=16% Similarity=0.170 Sum_probs=75.2
Q ss_pred eeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCC-CceeEEEeecceee---eCCcccccccccCCC-CCc
Q 011504 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDG-KLISRRVYRESCIF---SDGTYTKDLTVLGVD-LAK 415 (484)
Q Consensus 342 V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~LDP~~-~lfs~rL~Re~C~~---~~g~yiKDLs~LGrD-lsk 415 (484)
+.+.||+.++|++++ +.|.++|-|++...++..+++.++... .+|...+..+.-.. .+..|.+-+.++|.. +++
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~ 165 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDVQS 165 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcCCCChhH
Confidence 468899999999997 679999999999999999999998652 57887776554221 123456667788886 799
Q ss_pred EEEEECCchhhccCCCceeee
Q 011504 416 VAIIDNSPQVFRLQVNNGIPI 436 (484)
Q Consensus 416 VIIIDDsp~s~~~qp~NgIpI 436 (484)
+++|+|++.-.......|+++
T Consensus 166 ~~~igD~~~Di~aa~~aG~~~ 186 (220)
T TIGR03351 166 VAVAGDTPNDLEAGINAGAGA 186 (220)
T ss_pred eEEeCCCHHHHHHHHHCCCCe
Confidence 999999998776666777775
No 78
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=96.27 E-value=0.0055 Score=61.97 Aligned_cols=98 Identities=12% Similarity=0.155 Sum_probs=73.3
Q ss_pred eeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCC--CCceeEEEeecceeee---CCcccccccccCCCCCc
Q 011504 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPD--GKLISRRVYRESCIFS---DGTYTKDLTVLGVDLAK 415 (484)
Q Consensus 342 V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~LDP~--~~lfs~rL~Re~C~~~---~g~yiKDLs~LGrDlsk 415 (484)
+.+.||+.++|+++. +.+.++|-|++...++..+++.+.-. ..+|... ..+.+... ...|.+-+..+|.++++
T Consensus 143 ~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v-~~~~~~~~KP~p~~~~~a~~~~~~~p~~ 221 (286)
T PLN02779 143 LPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVF-AGDDVPKKKPDPDIYNLAAETLGVDPSR 221 (286)
T ss_pred CCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEE-eccccCCCCCCHHHHHHHHHHhCcChHH
Confidence 468999999999998 57999999999999999999877322 2223322 44443222 22566777888999999
Q ss_pred EEEEECCchhhccCCCceeeecccc
Q 011504 416 VAIIDNSPQVFRLQVNNGIPIESWF 440 (484)
Q Consensus 416 VIIIDDsp~s~~~qp~NgIpI~sw~ 440 (484)
+|+|+|++.-+.....+|+.+....
T Consensus 222 ~l~IGDs~~Di~aA~~aG~~~i~v~ 246 (286)
T PLN02779 222 CVVVEDSVIGLQAAKAAGMRCIVTK 246 (286)
T ss_pred EEEEeCCHHhHHHHHHcCCEEEEEc
Confidence 9999999988877777787766553
No 79
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=96.17 E-value=0.0086 Score=56.73 Aligned_cols=93 Identities=14% Similarity=0.106 Sum_probs=76.2
Q ss_pred eeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeecceeeeC---CcccccccccCCCCCcEEE
Q 011504 342 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVAI 418 (484)
Q Consensus 342 V~lRPgL~eFLe~Lsk~YEIvIfTAs~~~YAd~ILd~LDP~~~lfs~rL~Re~C~~~~---g~yiKDLs~LGrDlskVII 418 (484)
+...|++.++|+.+.+.|.++|.|++...++...+..+.. ..+|+..++.+.....+ ..|..-++.+|.+++++++
T Consensus 98 ~~~~~~~~~~L~~l~~~~~l~ilTNg~~~~~~~~l~~~gl-~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~~l~ 176 (229)
T COG1011 98 LPDYPEALEALKELGKKYKLGILTNGARPHQERKLRQLGL-LDYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEALF 176 (229)
T ss_pred CccChhHHHHHHHHHhhccEEEEeCCChHHHHHHHHHcCC-hhhhheEEEecccccCCCCcHHHHHHHHHcCCCcceEEE
Confidence 6778999999999997799999999999999999999984 45899999988766433 3577788889999999999
Q ss_pred EECCchhh-ccCCCceee
Q 011504 419 IDNSPQVF-RLQVNNGIP 435 (484)
Q Consensus 419 IDDsp~s~-~~qp~NgIp 435 (484)
|||+...- .....-|+.
T Consensus 177 VgD~~~~di~gA~~~G~~ 194 (229)
T COG1011 177 VGDSLENDILGARALGMK 194 (229)
T ss_pred ECCChhhhhHHHHhcCcE
Confidence 99999766 333334443
No 80
>PRK08238 hypothetical protein; Validated
Probab=96.16 E-value=0.0051 Score=67.02 Aligned_cols=48 Identities=15% Similarity=0.090 Sum_probs=40.6
Q ss_pred eeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeec
Q 011504 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRE 393 (484)
Q Consensus 342 V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~LDP~~~lfs~rL~Re 393 (484)
...+|++.++|+++. +.+.++|-|++.+.++++++++++- |+..+..+
T Consensus 71 lp~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl----Fd~Vigsd 119 (479)
T PRK08238 71 LPYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL----FDGVFASD 119 (479)
T ss_pred CCCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC----CCEEEeCC
Confidence 357899999999997 6799999999999999999999864 55555544
No 81
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=96.15 E-value=0.0064 Score=57.11 Aligned_cols=91 Identities=14% Similarity=0.092 Sum_probs=67.8
Q ss_pred eeCchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeecceeeeC---CcccccccccCCCCCcEEE
Q 011504 343 KQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVAI 418 (484)
Q Consensus 343 ~lRPgL~eFLe~Lsk-~YEIvIfTAs~~~YAd~ILd~LDP~~~lfs~rL~Re~C~~~~---g~yiKDLs~LGrDlskVII 418 (484)
...||+.++|++|++ .|.++|.|++...+ ..+++.++-.+ +|...+..+.+...+ ..|.+-++.+|.+++++|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~-~~~l~~~~l~~-~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~~~~~~~ 182 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSRL-RGLLEALGLLE-YFDFVVTSYEVGAEKPDPKIFQEALERAGISPEEALH 182 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchhH-HHHHHHCCcHH-hcceEEeecccCCCCCCHHHHHHHHHHcCCChhHEEE
Confidence 567999999999985 69999999988764 77888876654 788877766554332 2467778889999999999
Q ss_pred EECCc-hhhccCCCceee
Q 011504 419 IDNSP-QVFRLQVNNGIP 435 (484)
Q Consensus 419 IDDsp-~s~~~qp~NgIp 435 (484)
|+|++ .-.......|+.
T Consensus 183 IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 183 IGDSLRNDYQGARAAGWR 200 (203)
T ss_pred ECCCchHHHHHHHHcCCe
Confidence 99997 334333344443
No 82
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=96.14 E-value=0.0045 Score=56.80 Aligned_cols=91 Identities=15% Similarity=0.156 Sum_probs=69.2
Q ss_pred eeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeecceee---eCCcccccccccCCCCCcEEE
Q 011504 343 KQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIF---SDGTYTKDLTVLGVDLAKVAI 418 (484)
Q Consensus 343 ~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~LDP~~~lfs~rL~Re~C~~---~~g~yiKDLs~LGrDlskVII 418 (484)
.+.||+.++|++|. +.+.++|-|++. .+..+++.++... +|+..+..+.-.. ....|.+-+++++.+++++|+
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~--~~~~~l~~~~l~~-~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~v~ 163 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASK--NAPTVLEKLGLID-YFDAIVDPAEIKKGKPDPEIFLAAAEGLGVSPSECIG 163 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCc--cHHHHHHhcCcHh-hCcEEEehhhcCCCCCChHHHHHHHHHcCCCHHHeEE
Confidence 56899999999998 569999999764 3677888887764 7887776543221 123567778888999999999
Q ss_pred EECCchhhccCCCceeee
Q 011504 419 IDNSPQVFRLQVNNGIPI 436 (484)
Q Consensus 419 IDDsp~s~~~qp~NgIpI 436 (484)
|+|++.-+.....+|++.
T Consensus 164 vgD~~~di~aA~~aG~~~ 181 (185)
T TIGR01990 164 IEDAQAGIEAIKAAGMFA 181 (185)
T ss_pred EecCHHHHHHHHHcCCEE
Confidence 999998776666677654
No 83
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=96.13 E-value=0.0052 Score=62.19 Aligned_cols=92 Identities=15% Similarity=0.125 Sum_probs=55.3
Q ss_pred CCceEEEEeccccccccccc----ccCCCCceEEEEeccccceeeeeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHH
Q 011504 301 RKSVTLVLDLDETLVHSTLE----YCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQL 375 (484)
Q Consensus 301 ~kK~tLVLDLDeTLVhSs~~----~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~I 375 (484)
.+++.+|||+|||+++.+.. ......|.- -.++.-........-||+.+||+++. +...++|.|+....+.+..
T Consensus 73 ~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~-~~w~~wv~~~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T 151 (266)
T TIGR01533 73 DKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDP-ETWDKWVQAAQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAAT 151 (266)
T ss_pred CCCCEEEEeCccccccChHHHHHHhcCCCcCCH-HHHHHHHHcCCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHH
Confidence 45789999999999987621 111111100 00000001123556799999999997 5689999999886666644
Q ss_pred H---HHhCCCCCceeEEEeec
Q 011504 376 L---DILDPDGKLISRRVYRE 393 (484)
Q Consensus 376 L---d~LDP~~~lfs~rL~Re 393 (484)
+ +.++.....+.+.++|+
T Consensus 152 ~~~Lkk~Gi~~~~~d~lllr~ 172 (266)
T TIGR01533 152 LKNLKRFGFPQADEEHLLLKK 172 (266)
T ss_pred HHHHHHcCcCCCCcceEEeCC
Confidence 4 44444332345666665
No 84
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=96.10 E-value=0.0053 Score=60.31 Aligned_cols=95 Identities=12% Similarity=0.093 Sum_probs=71.0
Q ss_pred eeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhC---CCCCceeEEEeeccee-eeCCcccccccccCCCCCcE
Q 011504 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILD---PDGKLISRRVYRESCI-FSDGTYTKDLTVLGVDLAKV 416 (484)
Q Consensus 342 V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~LD---P~~~lfs~rL~Re~C~-~~~g~yiKDLs~LGrDlskV 416 (484)
..+.|++.++|+++. +.+.++|+|++...+...+++..+ .. .+|+..+....+. .....|.+-++.+|.+++++
T Consensus 94 ~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~-~~f~~~fd~~~g~KP~p~~y~~i~~~lgv~p~e~ 172 (220)
T TIGR01691 94 SHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLT-PYFSGYFDTTVGLKTEAQSYVKIAGQLGSPPREI 172 (220)
T ss_pred cCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchh-hhcceEEEeCcccCCCHHHHHHHHHHhCcChhHE
Confidence 567899999999998 679999999999999999988763 22 2565544221111 12346778888999999999
Q ss_pred EEEECCchhhccCCCceeeec
Q 011504 417 AIIDNSPQVFRLQVNNGIPIE 437 (484)
Q Consensus 417 IIIDDsp~s~~~qp~NgIpI~ 437 (484)
++|+|++.-.......|+...
T Consensus 173 lfVgDs~~Di~AA~~AG~~ti 193 (220)
T TIGR01691 173 LFLSDIINELDAARKAGLHTG 193 (220)
T ss_pred EEEeCCHHHHHHHHHcCCEEE
Confidence 999999987766666676643
No 85
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=95.96 E-value=0.015 Score=54.63 Aligned_cols=81 Identities=16% Similarity=0.181 Sum_probs=64.9
Q ss_pred eCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeecceeee--CCcccccccccCCCCCcEEEEE
Q 011504 344 QRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFS--DGTYTKDLTVLGVDLAKVAIID 420 (484)
Q Consensus 344 lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~LDP~~~lfs~rL~Re~C~~~--~g~yiKDLs~LGrDlskVIIID 420 (484)
..|+..++|+.+. +.+.++|.|++.+.+++.+++.++-.. +|...+..+..... ...|.+-++.+|.+++++|+|.
T Consensus 107 ~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~-~f~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~i~vG 185 (197)
T TIGR01548 107 TLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEI-LFPVQIWMEDCPPKPNPEPLILAAKALGVEACHAAMVG 185 (197)
T ss_pred cccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchh-hCCEEEeecCCCCCcCHHHHHHHHHHhCcCcccEEEEe
Confidence 3455699999998 469999999999999999999998764 88888776654321 2345677788899999999999
Q ss_pred CCchh
Q 011504 421 NSPQV 425 (484)
Q Consensus 421 Dsp~s 425 (484)
|++.-
T Consensus 186 D~~~D 190 (197)
T TIGR01548 186 DTVDD 190 (197)
T ss_pred CCHHH
Confidence 99853
No 86
>PLN02811 hydrolase
Probab=95.87 E-value=0.0077 Score=57.85 Aligned_cols=97 Identities=13% Similarity=0.117 Sum_probs=71.5
Q ss_pred eeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHH-HHHHhCCCCCceeEEEeec--ceee---eCCcccccccccC---C
Q 011504 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQ-LLDILDPDGKLISRRVYRE--SCIF---SDGTYTKDLTVLG---V 411 (484)
Q Consensus 342 V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~-ILd~LDP~~~lfs~rL~Re--~C~~---~~g~yiKDLs~LG---r 411 (484)
+.+.||+.++|+.|+ ..|.++|-|++.+.+... +++..... .+|...++.+ ++.. .+..|.+-+..+| .
T Consensus 77 ~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~-~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~ 155 (220)
T PLN02811 77 SDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELF-SLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGPV 155 (220)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHH-hhCCEEEECChhhccCCCCCcHHHHHHHHHhCCCCC
Confidence 456899999999998 469999999998876654 33322222 3788888877 5433 2346677777775 8
Q ss_pred CCCcEEEEECCchhhccCCCceeeeccc
Q 011504 412 DLAKVAIIDNSPQVFRLQVNNGIPIESW 439 (484)
Q Consensus 412 DlskVIIIDDsp~s~~~qp~NgIpI~sw 439 (484)
.++++|+|+|++.-+......|++..-.
T Consensus 156 ~~~~~v~IgDs~~di~aA~~aG~~~i~v 183 (220)
T PLN02811 156 DPGKVLVFEDAPSGVEAAKNAGMSVVMV 183 (220)
T ss_pred CccceEEEeccHhhHHHHHHCCCeEEEE
Confidence 8999999999998777777777776654
No 87
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=95.67 E-value=0.019 Score=55.95 Aligned_cols=84 Identities=14% Similarity=0.239 Sum_probs=62.4
Q ss_pred eeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeecceeeeC---Ccc----ccc------cc
Q 011504 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTY----TKD------LT 407 (484)
Q Consensus 342 V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~LDP~~~lfs~rL~Re~C~~~~---g~y----iKD------Ls 407 (484)
..++||+.+.++++. ..+.++|.|+|-..++++|.+.|..+. .+..++-.+.=.+.. |.. -|. ++
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~-~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~ 154 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDY-VVANELEIDDGKLTGRVVGPICDGEGKAKALRELAA 154 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCch-heeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHH
Confidence 788999999999999 569999999999999999999999886 567777655411221 111 111 23
Q ss_pred ccCCCCCcEEEEECCchhh
Q 011504 408 VLGVDLAKVAIIDNSPQVF 426 (484)
Q Consensus 408 ~LGrDlskVIIIDDsp~s~ 426 (484)
.+|.++++++-+=|+..-.
T Consensus 155 ~~g~~~~~~~a~gDs~nDl 173 (212)
T COG0560 155 ELGIPLEETVAYGDSANDL 173 (212)
T ss_pred HcCCCHHHeEEEcCchhhH
Confidence 4578888888888887544
No 88
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=95.52 E-value=0.021 Score=67.77 Aligned_cols=97 Identities=10% Similarity=0.099 Sum_probs=80.2
Q ss_pred eCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeecceeee---CCcccccccccCCCCCcEEEE
Q 011504 344 QRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFS---DGTYTKDLTVLGVDLAKVAII 419 (484)
Q Consensus 344 lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~LDP~~~lfs~rL~Re~C~~~---~g~yiKDLs~LGrDlskVIII 419 (484)
..||+.++|++|. +.|.++|.|++.+.+++.+++.++-...+|...+..+.+... ...|.+-++++|.+++++|+|
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~p~e~v~I 241 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLAAAKILGVPTSECVVI 241 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECcccccCCCCHHHHHHHHHHcCcCcccEEEE
Confidence 4899999999998 569999999999999999999998654578888887766533 236778888999999999999
Q ss_pred ECCchhhccCCCceeeecccc
Q 011504 420 DNSPQVFRLQVNNGIPIESWF 440 (484)
Q Consensus 420 DDsp~s~~~qp~NgIpI~sw~ 440 (484)
+|++.-+......|++.....
T Consensus 242 gDs~~Di~AA~~aGm~~I~v~ 262 (1057)
T PLN02919 242 EDALAGVQAARAAGMRCIAVT 262 (1057)
T ss_pred cCCHHHHHHHHHcCCEEEEEC
Confidence 999987777777777665443
No 89
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=95.30 E-value=0.019 Score=61.74 Aligned_cols=92 Identities=13% Similarity=0.169 Sum_probs=71.0
Q ss_pred eeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeecceee--eCCcccccccccCCCCCcEEE
Q 011504 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIF--SDGTYTKDLTVLGVDLAKVAI 418 (484)
Q Consensus 342 V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~LDP~~~lfs~rL~Re~C~~--~~g~yiKDLs~LGrDlskVII 418 (484)
+.+.||+.++|+++. +.+.+.|.|++.+.++..+++.++-.. +|...+..+.... .+..|.+-+..+ +++++|+
T Consensus 329 ~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~-~f~~i~~~d~v~~~~kP~~~~~al~~l--~~~~~v~ 405 (459)
T PRK06698 329 GALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQ-WVTETFSIEQINSLNKSDLVKSILNKY--DIKEAAV 405 (459)
T ss_pred CCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHh-hcceeEecCCCCCCCCcHHHHHHHHhc--CcceEEE
Confidence 567899999999998 569999999999999999999998765 7888777655321 122344445555 3688999
Q ss_pred EECCchhhccCCCceeee
Q 011504 419 IDNSPQVFRLQVNNGIPI 436 (484)
Q Consensus 419 IDDsp~s~~~qp~NgIpI 436 (484)
|.|++.-+......|+..
T Consensus 406 VGDs~~Di~aAk~AG~~~ 423 (459)
T PRK06698 406 VGDRLSDINAAKDNGLIA 423 (459)
T ss_pred EeCCHHHHHHHHHCCCeE
Confidence 999998776666677654
No 90
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=95.28 E-value=0.046 Score=52.52 Aligned_cols=96 Identities=11% Similarity=0.065 Sum_probs=65.1
Q ss_pred eeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeEEE--eecceeeeC-------------Cccccc
Q 011504 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRV--YRESCIFSD-------------GTYTKD 405 (484)
Q Consensus 342 V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~LDP~~~lfs~rL--~Re~C~~~~-------------g~yiKD 405 (484)
+.++||+.+||+++. +.+.++|.|++...|++++++.+-+...++...+ ..+...... ..+.+-
T Consensus 73 ~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K~~~ 152 (219)
T PRK09552 73 AEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGLIPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCKPSL 152 (219)
T ss_pred CCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHhCCcCcEEEeEEEecCCeeEEeccCCccccccccCCCchHHH
Confidence 678999999999998 5699999999999999999998722222332222 111111100 012344
Q ss_pred ccccCCCCCcEEEEECCchhhccCCCceeeec
Q 011504 406 LTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIE 437 (484)
Q Consensus 406 Ls~LGrDlskVIIIDDsp~s~~~qp~NgIpI~ 437 (484)
++.++....++|.|-|+..-.......|+.+.
T Consensus 153 l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a 184 (219)
T PRK09552 153 IRKLSDTNDFHIVIGDSITDLEAAKQADKVFA 184 (219)
T ss_pred HHHhccCCCCEEEEeCCHHHHHHHHHCCccee
Confidence 55667788899999999986655556677444
No 91
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=94.99 E-value=0.036 Score=51.73 Aligned_cols=106 Identities=20% Similarity=0.260 Sum_probs=56.4
Q ss_pred eEEEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhh-cceEEEEEcCCc---H----------
Q 011504 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQ---S---------- 369 (484)
Q Consensus 304 ~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Ls-k~YEIvIfTAs~---~---------- 369 (484)
|.+.|||||||+....... | . ....=+..+-|++-+-|+++. +.|.|||+|+.. +
T Consensus 1 Kia~fD~DgTLi~~~s~~~----f------~-~~~~D~~~~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~ 69 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKSGKK----F------P-KDPDDWKFFPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENF 69 (159)
T ss_dssp SEEEE-SCTTTEE-STSTT----S--------SSTCGGEEC-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHH
T ss_pred CEEEEeCCCCccCCCCCCc----C------c-CCHHHhhhcchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHH
Confidence 4789999999998753211 0 0 001113456788999999999 579999999752 1
Q ss_pred -HHHHHHHHHhCCCCCceeEEEe---ecceee-eCCcccccccccC----CCCCcEEEEECCch
Q 011504 370 -IYAAQLLDILDPDGKLISRRVY---RESCIF-SDGTYTKDLTVLG----VDLAKVAIIDNSPQ 424 (484)
Q Consensus 370 -~YAd~ILd~LDP~~~lfs~rL~---Re~C~~-~~g~yiKDLs~LG----rDlskVIIIDDsp~ 424 (484)
...+.+++.|+- .+ ..++ .+.|.. ..|.+..-++.++ .|+++.++|=|.+.
T Consensus 70 ~~ki~~il~~l~i---p~-~~~~a~~~d~~RKP~~GM~~~~~~~~~~~~~id~~~Sf~VGDaag 129 (159)
T PF08645_consen 70 HEKIENILKELGI---PI-QVYAAPHKDPCRKPNPGMWEFALKDYNDGVEIDLANSFYVGDAAG 129 (159)
T ss_dssp HHHHHHHHHHCTS----E-EEEECGCSSTTSTTSSHHHHHHCCCTSTT--S-CCC-EEEESSCH
T ss_pred HHHHHHHHHHcCC---ce-EEEecCCCCCCCCCchhHHHHHHHhccccccccccceEEEeccCC
Confidence 233445555532 23 2222 122221 1344433333333 58899999998753
No 92
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=94.84 E-value=0.046 Score=51.71 Aligned_cols=115 Identities=12% Similarity=0.121 Sum_probs=73.5
Q ss_pred ceEEEEecccccccccccccCCCCceEEEEeccccc-eeeeeeCchHHHHHHHh-hcceEEEEEcCCcHHHHHHHHHHhC
Q 011504 303 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEH-TVYVKQRPHLKTFLERV-AEMFEVVIFTASQSIYAAQLLDILD 380 (484)
Q Consensus 303 K~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~-~v~V~lRPgL~eFLe~L-sk~YEIvIfTAs~~~YAd~ILd~LD 380 (484)
-+++|||.||+|-.-+. .++..+. ...+-.|-+.-- +.| .+.+.+.|.|+....+++.+++.+.
T Consensus 7 i~~~v~d~dGv~tdg~~------------~~~~~g~~~~~~~~~D~~~~--~~L~~~Gi~laIiT~k~~~~~~~~l~~lg 72 (169)
T TIGR02726 7 IKLVILDVDGVMTDGRI------------VINDEGIESRNFDIKDGMGV--IVLQLCGIDVAIITSKKSGAVRHRAEELK 72 (169)
T ss_pred CeEEEEeCceeeECCeE------------EEcCCCcEEEEEecchHHHH--HHHHHCCCEEEEEECCCcHHHHHHHHHCC
Confidence 56899999999976531 1122222 222334444432 223 3679999999999999999999997
Q ss_pred CCCCceeEEEeecceeeeCCcccccccccCCCCCcEEEEECCchhhccCCCceeeecc
Q 011504 381 PDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIES 438 (484)
Q Consensus 381 P~~~lfs~rL~Re~C~~~~g~yiKDLs~LGrDlskVIIIDDsp~s~~~qp~NgIpI~s 438 (484)
-.. +|... ......+.+-+..+|.++++++.|-|++.-...-...|+.+..
T Consensus 73 i~~-~f~~~------kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am 123 (169)
T TIGR02726 73 IKR-FHEGI------KKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAV 123 (169)
T ss_pred CcE-EEecC------CCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEEC
Confidence 763 55421 1111234455567788899999999998655444445555443
No 93
>PTZ00445 p36-lilke protein; Provisional
Probab=94.84 E-value=0.042 Score=54.25 Aligned_cols=128 Identities=16% Similarity=0.162 Sum_probs=79.2
Q ss_pred CCCceEEEEeccccccc--cc--ccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhh-cceEEEEEcCCcHHH---
Q 011504 300 GRKSVTLVLDLDETLVH--ST--LEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIY--- 371 (484)
Q Consensus 300 ~~kK~tLVLDLDeTLVh--Ss--~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~Y--- 371 (484)
..+-+.+++|||.|||- |- |++. +....+.-..||.+..+++.|. ..+.|+|-|-+.+.-
T Consensus 40 ~~GIk~Va~D~DnTlI~~HsgG~~~~~------------~~~~~~~~~~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~ 107 (219)
T PTZ00445 40 ECGIKVIASDFDLTMITKHSGGYIDPD------------NDDIRVLTSVTPDFKILGKRLKNSNIKISVVTFSDKELIPS 107 (219)
T ss_pred HcCCeEEEecchhhhhhhhcccccCCC------------cchhhhhccCCHHHHHHHHHHHHCCCeEEEEEccchhhccc
Confidence 45677999999999975 21 1111 0112234557999999999998 469999999998854
Q ss_pred ------------HHHHHHHhCCCCCceeEE------Eeecceeee--------CCc--c--cccccccCCCCCcEEEEEC
Q 011504 372 ------------AAQLLDILDPDGKLISRR------VYRESCIFS--------DGT--Y--TKDLTVLGVDLAKVAIIDN 421 (484)
Q Consensus 372 ------------Ad~ILd~LDP~~~lfs~r------L~Re~C~~~--------~g~--y--iKDLs~LGrDlskVIIIDD 421 (484)
+...|+.=.-.-+ +... ++++.-.+. .+. | .+=+++.|.+++.+++|||
T Consensus 108 ~~~~~~Isg~~li~~~lk~s~~~~~-i~~~~~yyp~~w~~p~~y~~~gl~KPdp~iK~yHle~ll~~~gl~peE~LFIDD 186 (219)
T PTZ00445 108 ENRPRYISGDRMVEAALKKSKCDFK-IKKVYAYYPKFWQEPSDYRPLGLDAPMPLDKSYHLKQVCSDFNVNPDEILFIDD 186 (219)
T ss_pred cCCcceechHHHHHHHHHhcCccce-eeeeeeeCCcccCChhhhhhhcccCCCccchHHHHHHHHHHcCCCHHHeEeecC
Confidence 4444443221111 1111 112211111 122 3 4455667999999999999
Q ss_pred CchhhccCCCceeeecccc
Q 011504 422 SPQVFRLQVNNGIPIESWF 440 (484)
Q Consensus 422 sp~s~~~qp~NgIpI~sw~ 440 (484)
.+..+.....-|+...-+.
T Consensus 187 ~~~NVeaA~~lGi~ai~f~ 205 (219)
T PTZ00445 187 DMNNCKNALKEGYIALHVT 205 (219)
T ss_pred CHHHHHHHHHCCCEEEEcC
Confidence 9998876666677665554
No 94
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=94.78 E-value=0.089 Score=51.68 Aligned_cols=58 Identities=31% Similarity=0.339 Sum_probs=50.6
Q ss_pred ceEEEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCC
Q 011504 303 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDP 381 (484)
Q Consensus 303 K~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~LDP 381 (484)
.+.|++||||||+.+... .+|...+.|+++. +.+.++|-|.-....+.++++.|..
T Consensus 3 ~kli~~DlDGTLl~~~~~-----------------------i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~ 59 (264)
T COG0561 3 IKLLAFDLDGTLLDSNKT-----------------------ISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGL 59 (264)
T ss_pred eeEEEEcCCCCccCCCCc-----------------------cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCC
Confidence 578999999999987421 5788999999885 8899999999999999999999998
Q ss_pred CC
Q 011504 382 DG 383 (484)
Q Consensus 382 ~~ 383 (484)
.+
T Consensus 60 ~~ 61 (264)
T COG0561 60 DG 61 (264)
T ss_pred Cc
Confidence 76
No 95
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=94.73 E-value=0.077 Score=52.79 Aligned_cols=58 Identities=21% Similarity=0.169 Sum_probs=47.3
Q ss_pred ceEEEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhCC
Q 011504 303 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDP 381 (484)
Q Consensus 303 K~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Lsk-~YEIvIfTAs~~~YAd~ILd~LDP 381 (484)
.+.+++||||||+.... ...|...+.|+++.+ .+.++|-|.-....+..+++.++.
T Consensus 4 ~kli~~DlDGTLl~~~~-----------------------~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l 60 (273)
T PRK00192 4 KLLVFTDLDGTLLDHHT-----------------------YSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGL 60 (273)
T ss_pred ceEEEEcCcccCcCCCC-----------------------cCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCC
Confidence 46899999999997421 135778899999985 599999999999999999999876
Q ss_pred CC
Q 011504 382 DG 383 (484)
Q Consensus 382 ~~ 383 (484)
..
T Consensus 61 ~~ 62 (273)
T PRK00192 61 ED 62 (273)
T ss_pred CC
Confidence 53
No 96
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=94.70 E-value=0.01 Score=58.74 Aligned_cols=101 Identities=17% Similarity=0.118 Sum_probs=75.6
Q ss_pred eeeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEe--ecceee---eCCcccccccccCCCC-
Q 011504 341 YVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVY--RESCIF---SDGTYTKDLTVLGVDL- 413 (484)
Q Consensus 341 ~V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~LDP~~~lfs~rL~--Re~C~~---~~g~yiKDLs~LGrDl- 413 (484)
.++.-||+..+++.|. ..-.+.++|.+.+..++..++.+.-.-..|++... -..+.. .+..|.+-+++||..+
T Consensus 90 ~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~f~~~v~~d~~~v~~gKP~Pdi~l~A~~~l~~~~~ 169 (222)
T KOG2914|consen 90 NSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKNFSHVVLGDDPEVKNGKPDPDIYLKAAKRLGVPPP 169 (222)
T ss_pred ccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHhcCCCeecCCccccCCCCCchHHHHHHHhcCCCCc
Confidence 3788999999999999 55899999999999999888887622235666666 222221 2346889999999988
Q ss_pred CcEEEEECCchhhccCCCceeeeccccC
Q 011504 414 AKVAIIDNSPQVFRLQVNNGIPIESWFD 441 (484)
Q Consensus 414 skVIIIDDsp~s~~~qp~NgIpI~sw~~ 441 (484)
+++++++|++........-|.++...-+
T Consensus 170 ~k~lVfeds~~Gv~aa~aagm~vi~v~~ 197 (222)
T KOG2914|consen 170 SKCLVFEDSPVGVQAAKAAGMQVVGVAT 197 (222)
T ss_pred cceEEECCCHHHHHHHHhcCCeEEEecC
Confidence 9999999999877665555555554443
No 97
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=94.69 E-value=0.011 Score=54.16 Aligned_cols=76 Identities=13% Similarity=0.113 Sum_probs=62.4
Q ss_pred eeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeecceeee---CCcccccccccCCCCCcEEE
Q 011504 342 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFS---DGTYTKDLTVLGVDLAKVAI 418 (484)
Q Consensus 342 V~lRPgL~eFLe~Lsk~YEIvIfTAs~~~YAd~ILd~LDP~~~lfs~rL~Re~C~~~---~g~yiKDLs~LGrDlskVII 418 (484)
+..+||+.++|+. ++|.|++.+.++..+++.+.... +|...+..+..... ...|.+-++++|.+++++++
T Consensus 89 ~~~~~g~~~~L~~------~~i~Tn~~~~~~~~~l~~~~l~~-~fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~p~~~l~ 161 (175)
T TIGR01493 89 LPPWPDSAAALAR------VAILSNASHWAFDQFAQQAGLPW-YFDRAFSVDTVRAYKPDPVVYELVFDTVGLPPDRVLM 161 (175)
T ss_pred CCCCCchHHHHHH------HhhhhCCCHHHHHHHHHHCCCHH-HHhhhccHhhcCCCCCCHHHHHHHHHHHCCCHHHeEe
Confidence 5579999999994 78999999999999999997654 78877776654332 23577888899999999999
Q ss_pred EECCch
Q 011504 419 IDNSPQ 424 (484)
Q Consensus 419 IDDsp~ 424 (484)
|+|++.
T Consensus 162 vgD~~~ 167 (175)
T TIGR01493 162 VAAHQW 167 (175)
T ss_pred EecChh
Confidence 999974
No 98
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=94.51 E-value=0.07 Score=46.04 Aligned_cols=50 Identities=24% Similarity=0.267 Sum_probs=36.4
Q ss_pred EEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHh
Q 011504 306 LVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDIL 379 (484)
Q Consensus 306 LVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Lsk-~YEIvIfTAs~~~YAd~ILd~L 379 (484)
++||+||||.+.. ..=||+.+||+++.+ ...+++.|++...-...+.+.|
T Consensus 1 ~l~D~dGvl~~g~------------------------~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L 51 (101)
T PF13344_consen 1 FLFDLDGVLYNGN------------------------EPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKL 51 (101)
T ss_dssp EEEESTTTSEETT------------------------EE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHH
T ss_pred CEEeCccEeEeCC------------------------CcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHH
Confidence 5899999998742 124999999999995 5999999999855444444444
No 99
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=94.51 E-value=0.09 Score=49.44 Aligned_cols=54 Identities=28% Similarity=0.284 Sum_probs=44.9
Q ss_pred EEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCC
Q 011504 306 LVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPD 382 (484)
Q Consensus 306 LVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~LDP~ 382 (484)
|++||||||+++... .-|...+.|+++. +...++|.|.-....+..+++.+.-.
T Consensus 1 i~~DlDGTLl~~~~~-----------------------i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~ 55 (254)
T PF08282_consen 1 IFSDLDGTLLNSDGK-----------------------ISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGID 55 (254)
T ss_dssp EEEECCTTTCSTTSS-----------------------SCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHC
T ss_pred cEEEECCceecCCCe-----------------------eCHHHHHHHHhhcccceEEEEEccCcccccccccccccch
Confidence 689999999985311 3577888899888 78999999999999999999977644
No 100
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=94.24 E-value=0.096 Score=50.26 Aligned_cols=94 Identities=10% Similarity=0.095 Sum_probs=61.3
Q ss_pred eeeeCchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEe--ecceeee-C--C----------cccc
Q 011504 341 YVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVY--RESCIFS-D--G----------TYTK 404 (484)
Q Consensus 341 ~V~lRPgL~eFLe~Lsk-~YEIvIfTAs~~~YAd~ILd~LDP~~~lfs~rL~--Re~C~~~-~--g----------~yiK 404 (484)
.+.+|||+.+||+++.+ .+.++|.|++...|++++++.+.+...++..++. .+..... + . ...+
T Consensus 68 ~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~~ 147 (214)
T TIGR03333 68 TAEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKPS 147 (214)
T ss_pred cCcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHHH
Confidence 36899999999999996 5999999999999999999998654433433332 1111110 0 0 0112
Q ss_pred cccccCCCCCcEEEEECCchhhccCCCcee
Q 011504 405 DLTVLGVDLAKVAIIDNSPQVFRLQVNNGI 434 (484)
Q Consensus 405 DLs~LGrDlskVIIIDDsp~s~~~qp~NgI 434 (484)
-++.++...+++|.|-|+..-+......++
T Consensus 148 ~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~ 177 (214)
T TIGR03333 148 LIRKLSEPNDYHIVIGDSVTDVEAAKQSDL 177 (214)
T ss_pred HHHHHhhcCCcEEEEeCCHHHHHHHHhCCe
Confidence 233445567789999999876644333444
No 101
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=94.12 E-value=0.084 Score=50.82 Aligned_cols=126 Identities=18% Similarity=0.257 Sum_probs=83.9
Q ss_pred ceEEEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhh-cceEEEEEcCCc------------H
Q 011504 303 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQ------------S 369 (484)
Q Consensus 303 K~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Ls-k~YEIvIfTAs~------------~ 369 (484)
.+.|+||.||||+--.. +|. . ..--..+.||+.+=|..+. ..|.+||+|+.+ .
T Consensus 5 ~k~lflDRDGtin~d~~------~yv-----~---~~~~~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~ 70 (181)
T COG0241 5 QKALFLDRDGTINIDKG------DYV-----D---SLDDFQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFD 70 (181)
T ss_pred CcEEEEcCCCceecCCC------ccc-----C---cHHHhccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHH
Confidence 57999999999974211 010 0 0011456899999999997 569999999943 3
Q ss_pred HHHHHHHHHhCCCCCceeEEEeecc-----eeee---CCcccccccccCCCCCcEEEEECCchhhccCCCc---eeeecc
Q 011504 370 IYAAQLLDILDPDGKLISRRVYRES-----CIFS---DGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNN---GIPIES 438 (484)
Q Consensus 370 ~YAd~ILd~LDP~~~lfs~rL~Re~-----C~~~---~g~yiKDLs~LGrDlskVIIIDDsp~s~~~qp~N---gIpI~s 438 (484)
.+-+.++..|--.+.-|+.++++.| |.+. .|.+..-++..+.|+++.++|=|+..-..+.... ++.+..
T Consensus 71 ~~~~~m~~~l~~~gv~id~i~~Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~~~~~~~ 150 (181)
T COG0241 71 KLHNKMLKILASQGVKIDGILYCPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIKGVLVLT 150 (181)
T ss_pred HHHHHHHHHHHHcCCccceEEECCCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCCceEEEc
Confidence 3445577777777767899998544 5443 3566666777789999999999996533222222 555666
Q ss_pred ccCC
Q 011504 439 WFDD 442 (484)
Q Consensus 439 w~~d 442 (484)
|.+.
T Consensus 151 ~~~~ 154 (181)
T COG0241 151 GIGV 154 (181)
T ss_pred Cccc
Confidence 5543
No 102
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=93.99 E-value=0.16 Score=50.49 Aligned_cols=59 Identities=19% Similarity=0.252 Sum_probs=45.9
Q ss_pred CCceEEEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHh
Q 011504 301 RKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDIL 379 (484)
Q Consensus 301 ~kK~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~L 379 (484)
+.++.+++||||||++.... .-|-..+-|+++. +...++|.|.-....+.++++.|
T Consensus 5 ~~~~lI~~DlDGTLL~~~~~-----------------------i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l 61 (271)
T PRK03669 5 QDPLLIFTDLDGTLLDSHTY-----------------------DWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTL 61 (271)
T ss_pred CCCeEEEEeCccCCcCCCCc-----------------------CcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHh
Confidence 45679999999999975210 1244667788887 56999999999999999999998
Q ss_pred CCC
Q 011504 380 DPD 382 (484)
Q Consensus 380 DP~ 382 (484)
+..
T Consensus 62 ~~~ 64 (271)
T PRK03669 62 GLQ 64 (271)
T ss_pred CCC
Confidence 764
No 103
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=93.96 E-value=0.063 Score=51.23 Aligned_cols=132 Identities=18% Similarity=0.242 Sum_probs=87.6
Q ss_pred CCccCCCCceEEEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhh-cceEEEEEcCCcHHHHH
Q 011504 295 PKETQGRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAA 373 (484)
Q Consensus 295 P~~~~~~kK~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd 373 (484)
|.....++-+.+|+|||+|||- |... ..-|-+.+.+..+. +.-.++|.++..+.-+.
T Consensus 20 ~~~L~~~Gikgvi~DlDNTLv~--wd~~--------------------~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~ 77 (175)
T COG2179 20 PDILKAHGIKGVILDLDNTLVP--WDNP--------------------DATPELRAWLAELKEAGIKVVVVSNNKESRVA 77 (175)
T ss_pred HHHHHHcCCcEEEEeccCceec--ccCC--------------------CCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHH
Confidence 3444567788999999999984 2211 13588899999999 55999999999999999
Q ss_pred HHHHHhCCCCCceeEEEeecceeeeCCcccccccccCCCCCcEEEEECCch--hhccCCCc--eeeeccccCCCCchHHH
Q 011504 374 QLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQ--VFRLQVNN--GIPIESWFDDPSDCSLI 449 (484)
Q Consensus 374 ~ILd~LDP~~~lfs~rL~Re~C~~~~g~yiKDLs~LGrDlskVIIIDDsp~--s~~~qp~N--gIpI~sw~~d~~D~eLl 449 (484)
.++..||-.. + ++- -......+.|-|..++.+.++|++|-|... +...+... .|.|+|-.. .|.---
T Consensus 78 ~~~~~l~v~f--i----~~A-~KP~~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~tIlV~Pl~~--~d~~~t 148 (175)
T COG2179 78 RAAEKLGVPF--I----YRA-KKPFGRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMRTILVEPLVA--PDGWIT 148 (175)
T ss_pred hhhhhcCCce--e----ecc-cCccHHHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCcEEEEEEEecc--ccchhh
Confidence 9999998753 1 110 001122456788889999999999999874 44433322 455666542 233222
Q ss_pred HHHHHHHh
Q 011504 450 SLLPFLDI 457 (484)
Q Consensus 450 ~LlpfLe~ 457 (484)
++.+.+|.
T Consensus 149 ~~nR~~Er 156 (175)
T COG2179 149 KINRWRER 156 (175)
T ss_pred hhhHHHHH
Confidence 44444443
No 104
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=93.80 E-value=0.14 Score=52.25 Aligned_cols=105 Identities=19% Similarity=0.323 Sum_probs=67.8
Q ss_pred eeeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCC---CCCceeEEEee-cceeee--CC----cccc-----
Q 011504 341 YVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDP---DGKLISRRVYR-ESCIFS--DG----TYTK----- 404 (484)
Q Consensus 341 ~V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~LDP---~~~lfs~rL~R-e~C~~~--~g----~yiK----- 404 (484)
-+.+|||+.+||++|. ....++|+|+|...+++.+++.++- ....++.++-- +.-... .+ .+.|
T Consensus 119 ~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~v~ 198 (277)
T TIGR01544 119 DVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHDVA 198 (277)
T ss_pred CCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHHHH
Confidence 3788999999999998 4599999999999999999998654 22455666643 221111 11 1122
Q ss_pred --cccccC--CCCCcEEEEECCchhhcc-----CCCceeeeccccCCCCch
Q 011504 405 --DLTVLG--VDLAKVAIIDNSPQVFRL-----QVNNGIPIESWFDDPSDC 446 (484)
Q Consensus 405 --DLs~LG--rDlskVIIIDDsp~s~~~-----qp~NgIpI~sw~~d~~D~ 446 (484)
..+.++ .+.+++|+|-|+..-..+ +.+|.|.| .|-.+.-+.
T Consensus 199 ~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~i-gfln~~~e~ 248 (277)
T TIGR01544 199 LRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKI-GYLNDRVDE 248 (277)
T ss_pred HHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEE-EecccCHHH
Confidence 122345 678899999999964422 33455555 344444343
No 105
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=93.75 E-value=0.17 Score=48.28 Aligned_cols=57 Identities=16% Similarity=0.229 Sum_probs=46.5
Q ss_pred eEEEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCC
Q 011504 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPD 382 (484)
Q Consensus 304 ~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~LDP~ 382 (484)
+.+++||||||+.... ...|...+-|+++. +.+.++|.|.-....+.++++.|+..
T Consensus 2 k~v~~DlDGTLl~~~~-----------------------~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~ 58 (215)
T TIGR01487 2 KLVAIDIDGTLTEPNR-----------------------MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTS 58 (215)
T ss_pred cEEEEecCCCcCCCCc-----------------------ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCC
Confidence 4789999999995310 24677888888888 56999999999999999999999876
Q ss_pred C
Q 011504 383 G 383 (484)
Q Consensus 383 ~ 383 (484)
.
T Consensus 59 ~ 59 (215)
T TIGR01487 59 G 59 (215)
T ss_pred C
Confidence 4
No 106
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=93.64 E-value=0.19 Score=49.44 Aligned_cols=57 Identities=19% Similarity=0.211 Sum_probs=45.6
Q ss_pred ceEEEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCC
Q 011504 303 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDP 381 (484)
Q Consensus 303 K~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~LDP 381 (484)
.+.+++||||||++... ..-|...+-|+++. +...++|-|.-....+.++++.+..
T Consensus 3 ~kli~~DlDGTLl~~~~-----------------------~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~ 59 (270)
T PRK10513 3 IKLIAIDMDGTLLLPDH-----------------------TISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHM 59 (270)
T ss_pred eEEEEEecCCcCcCCCC-----------------------ccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCC
Confidence 46899999999997531 13456678888888 5699999999999999999999876
Q ss_pred C
Q 011504 382 D 382 (484)
Q Consensus 382 ~ 382 (484)
.
T Consensus 60 ~ 60 (270)
T PRK10513 60 E 60 (270)
T ss_pred C
Confidence 4
No 107
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=93.37 E-value=0.19 Score=49.16 Aligned_cols=53 Identities=19% Similarity=0.222 Sum_probs=42.9
Q ss_pred EEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCC
Q 011504 306 LVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPD 382 (484)
Q Consensus 306 LVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~LDP~ 382 (484)
+++||||||++... .-|...++|+++. +...+++.|.-+...+..+++.+...
T Consensus 2 i~~DlDGTLl~~~~------------------------~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 2 IFTDLDGTLLPPGY------------------------EPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred EEEeCCCCCcCCCC------------------------CchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 68999999998420 1356889999998 46999999999988888899888753
No 108
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=93.35 E-value=0.23 Score=47.27 Aligned_cols=96 Identities=20% Similarity=0.278 Sum_probs=64.1
Q ss_pred CCCCceEEEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhhcce---EEEEEcCCc-------
Q 011504 299 QGRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMF---EVVIFTASQ------- 368 (484)
Q Consensus 299 ~~~kK~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Lsk~Y---EIvIfTAs~------- 368 (484)
...+-+.||||+|+||+.-.. -..-|.+.+.++++.+.| .|+|.|++.
T Consensus 37 k~~Gik~li~DkDNTL~~~~~----------------------~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~ 94 (168)
T PF09419_consen 37 KKKGIKALIFDKDNTLTPPYE----------------------DEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPD 94 (168)
T ss_pred hhcCceEEEEcCCCCCCCCCc----------------------CcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCcc
Confidence 456778999999999974321 124678889999999765 399999984
Q ss_pred HHHHHHHHHHhCCCCCceeEEEeecceeeeCCcccccccccC-----CCCCcEEEEECCch
Q 011504 369 SIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLG-----VDLAKVAIIDNSPQ 424 (484)
Q Consensus 369 ~~YAd~ILd~LDP~~~lfs~rL~Re~C~~~~g~yiKDLs~LG-----rDlskVIIIDDsp~ 424 (484)
..-|+.+-+.|... .+.|+ + ..++.+-+-++.++ ..++++++|-|+..
T Consensus 95 ~~~a~~~~~~lgIp--vl~h~-----~-kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~ 147 (168)
T PF09419_consen 95 GERAEALEKALGIP--VLRHR-----A-KKPGCFREILKYFKCQKVVTSPSEIAVIGDRLF 147 (168)
T ss_pred HHHHHHHHHhhCCc--EEEeC-----C-CCCccHHHHHHHHhhccCCCCchhEEEEcchHH
Confidence 67788888888743 22222 1 12333333333332 35899999999873
No 109
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=93.31 E-value=0.25 Score=48.32 Aligned_cols=58 Identities=24% Similarity=0.295 Sum_probs=43.6
Q ss_pred ceEEEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCC
Q 011504 303 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDP 381 (484)
Q Consensus 303 K~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~LDP 381 (484)
.+.+++||||||+.... ...|...+-|+++. +...++|-|.-....+.++++.|+.
T Consensus 3 ~kli~~DlDGTLl~~~~-----------------------~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~ 59 (272)
T PRK10530 3 YRVIALDLDGTLLTPKK-----------------------TILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALAL 59 (272)
T ss_pred ccEEEEeCCCceECCCC-----------------------ccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCC
Confidence 36899999999997531 12455667777777 5688889888888888888888876
Q ss_pred CC
Q 011504 382 DG 383 (484)
Q Consensus 382 ~~ 383 (484)
..
T Consensus 60 ~~ 61 (272)
T PRK10530 60 DT 61 (272)
T ss_pred CC
Confidence 53
No 110
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=93.29 E-value=0.021 Score=53.95 Aligned_cols=79 Identities=25% Similarity=0.371 Sum_probs=42.2
Q ss_pred eeeCchHHHHHHHhhcc-eEEEEEcCCcHH-H---HH---HHHHHhCCCCCceeEEEeecceeeeCCcccccccccCCCC
Q 011504 342 VKQRPHLKTFLERVAEM-FEVVIFTASQSI-Y---AA---QLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDL 413 (484)
Q Consensus 342 V~lRPgL~eFLe~Lsk~-YEIvIfTAs~~~-Y---Ad---~ILd~LDP~~~lfs~rL~Re~C~~~~g~yiKDLs~LGrDl 413 (484)
...=||+.+.|++|.+. +++++-|+.... + +. .-|+..-|. ......++..+ |. .++.|
T Consensus 72 l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~-i~~~~~~~~~~---------K~--~v~~D- 138 (191)
T PF06941_consen 72 LPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPF-IPYDNLIFTGD---------KT--LVGGD- 138 (191)
T ss_dssp --B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTH-HHHCCEEEESS---------GG--GC--S-
T ss_pred CCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCC-CchheEEEecC---------CC--eEecc-
Confidence 55679999999999966 577777776544 1 22 223332121 11222222111 22 34443
Q ss_pred CcEEEEECCchhhccCCCceeee
Q 011504 414 AKVAIIDNSPQVFRLQVNNGIPI 436 (484)
Q Consensus 414 skVIIIDDsp~s~~~qp~NgIpI 436 (484)
|+|||++.....-...|+++
T Consensus 139 ---vlIDD~~~n~~~~~~~g~~~ 158 (191)
T PF06941_consen 139 ---VLIDDRPHNLEQFANAGIPV 158 (191)
T ss_dssp ---EEEESSSHHHSS-SSESSEE
T ss_pred ---EEecCChHHHHhccCCCceE
Confidence 79999999887666677544
No 111
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=93.12 E-value=0.25 Score=47.09 Aligned_cols=54 Identities=22% Similarity=0.234 Sum_probs=43.1
Q ss_pred EEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCC
Q 011504 306 LVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPD 382 (484)
Q Consensus 306 LVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~LDP~ 382 (484)
+++||||||+++... .-|-..+.|+++. +...++|.|.-....+.++++.+...
T Consensus 2 i~~DlDGTLL~~~~~-----------------------~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 2 VFSDLDGTLLDSHSY-----------------------DWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred EEEeCCCCCcCCCCC-----------------------CcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 789999999975310 1223678899988 56899999999999999999998754
No 112
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=93.11 E-value=0.15 Score=55.76 Aligned_cols=129 Identities=18% Similarity=0.238 Sum_probs=74.0
Q ss_pred CCCceEEEEecccccccccccccCCCCceEEEEeccccc-eeeeeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHH
Q 011504 300 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEH-TVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLD 377 (484)
Q Consensus 300 ~~kK~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~-~v~V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd 377 (484)
.+.++.||||||+||.--. -..|-.-.+.+..... ..| --+.+|...+. +.+=+.|.+-....-|..+..
T Consensus 219 g~~kK~LVLDLDNTLWGGV----IGedGv~GI~Ls~~~~G~~f----k~fQ~~Ik~l~kqGVlLav~SKN~~~da~evF~ 290 (574)
T COG3882 219 GKSKKALVLDLDNTLWGGV----IGEDGVDGIRLSNSAEGEAF----KTFQNFIKGLKKQGVLLAVCSKNTEKDAKEVFR 290 (574)
T ss_pred CcccceEEEecCCcccccc----cccccccceeecCCCCchhH----HHHHHHHHHHHhccEEEEEecCCchhhHHHHHh
Confidence 4567899999999995433 2222211222211110 011 02456666666 678888888888888887765
Q ss_pred HhCCCCCceeEEEeecc-----eeeeC--CcccccccccCCCCCcEEEEECCchhhccCCCce-eeeccccCC
Q 011504 378 ILDPDGKLISRRVYRES-----CIFSD--GTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNG-IPIESWFDD 442 (484)
Q Consensus 378 ~LDP~~~lfs~rL~Re~-----C~~~~--g~yiKDLs~LGrDlskVIIIDDsp~s~~~qp~Ng-IpI~sw~~d 442 (484)
+- |+ ..|--++ |.+.+ .+..|-.++|+-.+.-.|+|||+|.....-..++ +.|.+|-.|
T Consensus 291 kh-p~-----MiLkeedfa~~~iNW~~K~eNirkIAkklNlg~dSmvFiDD~p~ErE~vk~~~~v~Vi~~~~D 357 (574)
T COG3882 291 KH-PD-----MILKEEDFAVFQINWDPKAENIRKIAKKLNLGLDSMVFIDDNPAERELVKRELPVSVIEFPED 357 (574)
T ss_pred hC-CC-----eEeeHhhhhhheecCCcchhhHHHHHHHhCCCccceEEecCCHHHHHHHHhcCceeeccCCCC
Confidence 42 21 1222222 22221 2455777788999999999999997664433333 555555433
No 113
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=93.00 E-value=0.33 Score=46.35 Aligned_cols=57 Identities=12% Similarity=0.222 Sum_probs=45.4
Q ss_pred eEEEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCC
Q 011504 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPD 382 (484)
Q Consensus 304 ~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~LDP~ 382 (484)
+.+++||||||+.... ...|...+-|+++. +...++|-|.-....+.++++.+...
T Consensus 4 kli~~DlDGTLl~~~~-----------------------~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 60 (230)
T PRK01158 4 KAIAIDIDGTITDKDR-----------------------RLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTS 60 (230)
T ss_pred eEEEEecCCCcCCCCC-----------------------ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCC
Confidence 6899999999996421 13567778888888 56899999999999999999888765
Q ss_pred C
Q 011504 383 G 383 (484)
Q Consensus 383 ~ 383 (484)
.
T Consensus 61 ~ 61 (230)
T PRK01158 61 G 61 (230)
T ss_pred C
Confidence 4
No 114
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=93.00 E-value=0.22 Score=48.72 Aligned_cols=55 Identities=25% Similarity=0.320 Sum_probs=43.8
Q ss_pred EEEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCC
Q 011504 305 TLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPD 382 (484)
Q Consensus 305 tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~LDP~ 382 (484)
.+++||||||++... ...|...+.|+++. +.+.++|-|.-....+..+++.+...
T Consensus 1 li~~DlDGTLl~~~~-----------------------~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~ 56 (256)
T TIGR00099 1 LIFIDLDGTLLNDDH-----------------------TISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLD 56 (256)
T ss_pred CEEEeCCCCCCCCCC-----------------------ccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 378999999997521 13566778888888 56999999999999999999888765
No 115
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=92.57 E-value=0.29 Score=45.51 Aligned_cols=61 Identities=15% Similarity=0.222 Sum_probs=42.0
Q ss_pred EEEeccccccccccc-ccCCCCceEEEEeccccceeeeeeCchHHHHHHHhh-cceEEEEEcCCcHHHHH---HHHHHh
Q 011504 306 LVLDLDETLVHSTLE-YCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAA---QLLDIL 379 (484)
Q Consensus 306 LVLDLDeTLVhSs~~-~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd---~ILd~L 379 (484)
+++|+||||+.+... ... . ..+.. +..|++.++++++. +.|.+++.|+.....+. +.+..+
T Consensus 2 VisDIDGTL~~sd~~~~~~------~----~~~~~---~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~ 67 (157)
T smart00775 2 VISDIDGTITKSDVLGHVV------P----IIGKD---WTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQI 67 (157)
T ss_pred EEEecCCCCcccccccccc------c----ccccC---cCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHh
Confidence 789999999977411 100 0 00111 34799999999999 56999999998877775 555553
No 116
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=92.53 E-value=0.33 Score=47.98 Aligned_cols=57 Identities=18% Similarity=0.201 Sum_probs=43.5
Q ss_pred eEEEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCC
Q 011504 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPD 382 (484)
Q Consensus 304 ~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~LDP~ 382 (484)
+.+++||||||+.+.. ..-|...+-|+++. +...++|-|.-....+.++++.++..
T Consensus 3 kli~~DlDGTLl~~~~-----------------------~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 59 (272)
T PRK15126 3 RLAAFDMDGTLLMPDH-----------------------HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLD 59 (272)
T ss_pred cEEEEeCCCcCcCCCC-----------------------cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCC
Confidence 5899999999996521 13455677778877 56888888888888888888888765
Q ss_pred C
Q 011504 383 G 383 (484)
Q Consensus 383 ~ 383 (484)
.
T Consensus 60 ~ 60 (272)
T PRK15126 60 A 60 (272)
T ss_pred C
Confidence 4
No 117
>PRK10976 putative hydrolase; Provisional
Probab=92.46 E-value=0.33 Score=47.62 Aligned_cols=57 Identities=23% Similarity=0.246 Sum_probs=42.4
Q ss_pred eEEEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCC
Q 011504 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPD 382 (484)
Q Consensus 304 ~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~LDP~ 382 (484)
+.+++||||||++... ..-|...+-|+++. +...++|-|.-....+.++++.|+..
T Consensus 3 kli~~DlDGTLl~~~~-----------------------~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 59 (266)
T PRK10976 3 QVVASDLDGTLLSPDH-----------------------TLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIK 59 (266)
T ss_pred eEEEEeCCCCCcCCCC-----------------------cCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCC
Confidence 5899999999997631 12455666777777 56888888888888888888887655
Q ss_pred C
Q 011504 383 G 383 (484)
Q Consensus 383 ~ 383 (484)
.
T Consensus 60 ~ 60 (266)
T PRK10976 60 S 60 (266)
T ss_pred C
Confidence 3
No 118
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=92.29 E-value=0.46 Score=43.19 Aligned_cols=49 Identities=16% Similarity=0.331 Sum_probs=41.7
Q ss_pred eeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEe
Q 011504 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVY 391 (484)
Q Consensus 342 V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~LDP~~~lfs~rL~ 391 (484)
+.++||+.++|+++. +.+.++|.|++.+.|++++++.++... +|..++.
T Consensus 72 ~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~-~~~~~~~ 121 (177)
T TIGR01488 72 VALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDD-VFANRLE 121 (177)
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCch-heeeeEE
Confidence 567999999999997 569999999999999999999987663 5665554
No 119
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=91.80 E-value=0.38 Score=47.26 Aligned_cols=55 Identities=25% Similarity=0.198 Sum_probs=43.4
Q ss_pred EEEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhCCC
Q 011504 305 TLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPD 382 (484)
Q Consensus 305 tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Lsk-~YEIvIfTAs~~~YAd~ILd~LDP~ 382 (484)
.+++||||||++.... ..|...++++++.+ ...+++-|.-....+..+++.++..
T Consensus 1 li~~DlDGTll~~~~~-----------------------~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~ 56 (256)
T TIGR01486 1 WIFTDLDGTLLDPHGY-----------------------DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLE 56 (256)
T ss_pred CEEEcCCCCCcCCCCc-----------------------CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 3789999999976310 12357899999985 5999999999999999999998753
No 120
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=91.61 E-value=0.13 Score=50.35 Aligned_cols=89 Identities=10% Similarity=0.113 Sum_probs=62.7
Q ss_pred eeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeecceeee---CCcccccccccCCCCCcEEE
Q 011504 342 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFS---DGTYTKDLTVLGVDLAKVAI 418 (484)
Q Consensus 342 V~lRPgL~eFLe~Lsk~YEIvIfTAs~~~YAd~ILd~LDP~~~lfs~rL~Re~C~~~---~g~yiKDLs~LGrDlskVII 418 (484)
+..-||+.++|++|++.|.++|.|++... ++.++.. .+|...+..+..... ...|.+-++.+|.+++++|+
T Consensus 112 ~~~~~gv~~~L~~L~~~~~l~i~Tn~~~~-----~~~~gl~-~~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~ 185 (238)
T PRK10748 112 IDVPQATHDTLKQLAKKWPLVAITNGNAQ-----PELFGLG-DYFEFVLRAGPHGRSKPFSDMYHLAAEKLNVPIGEILH 185 (238)
T ss_pred CCCCccHHHHHHHHHcCCCEEEEECCCch-----HHHCCcH-HhhceeEecccCCcCCCcHHHHHHHHHHcCCChhHEEE
Confidence 44558999999999988999999998765 2444443 478777765443222 23566777888999999999
Q ss_pred EECCc-hhhccCCCceeee
Q 011504 419 IDNSP-QVFRLQVNNGIPI 436 (484)
Q Consensus 419 IDDsp-~s~~~qp~NgIpI 436 (484)
|-|++ .-......+|+..
T Consensus 186 VGD~~~~Di~~A~~aG~~~ 204 (238)
T PRK10748 186 VGDDLTTDVAGAIRCGMQA 204 (238)
T ss_pred EcCCcHHHHHHHHHCCCeE
Confidence 98884 4444444566654
No 121
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=91.58 E-value=0.31 Score=50.21 Aligned_cols=53 Identities=17% Similarity=0.265 Sum_probs=41.6
Q ss_pred eEEEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhhc-----ceEEEEEcCCc----HHHHHH
Q 011504 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-----MFEVVIFTASQ----SIYAAQ 374 (484)
Q Consensus 304 ~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Lsk-----~YEIvIfTAs~----~~YAd~ 374 (484)
+.++||+||||+++. ..-|++.++|+.+.. ...++++|+.. +.+++.
T Consensus 1 ~~~ifD~DGvL~~g~------------------------~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~ 56 (321)
T TIGR01456 1 FGFAFDIDGVLFRGK------------------------KPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEE 56 (321)
T ss_pred CEEEEeCcCceECCc------------------------cccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHH
Confidence 368999999999873 126899999999996 78889999775 567777
Q ss_pred HHHHhC
Q 011504 375 LLDILD 380 (484)
Q Consensus 375 ILd~LD 380 (484)
+.+.++
T Consensus 57 l~~~lG 62 (321)
T TIGR01456 57 ISSLLG 62 (321)
T ss_pred HHHHcC
Confidence 766654
No 122
>PRK10444 UMP phosphatase; Provisional
Probab=91.40 E-value=0.3 Score=48.70 Aligned_cols=53 Identities=23% Similarity=0.366 Sum_probs=42.1
Q ss_pred eEEEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhC
Q 011504 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILD 380 (484)
Q Consensus 304 ~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~LD 380 (484)
+++++||||||++.. ..=|++.+||+++. +...+++.|+....-+..+++.|.
T Consensus 2 ~~v~~DlDGtL~~~~------------------------~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~ 55 (248)
T PRK10444 2 KNVICDIDGVLMHDN------------------------VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFA 55 (248)
T ss_pred cEEEEeCCCceEeCC------------------------eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHH
Confidence 378999999998762 12589999999998 579999999988876666666654
No 123
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=91.11 E-value=0.43 Score=44.87 Aligned_cols=54 Identities=31% Similarity=0.375 Sum_probs=43.2
Q ss_pred EEEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhC
Q 011504 305 TLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEM-FEVVIFTASQSIYAAQLLDILD 380 (484)
Q Consensus 305 tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Lsk~-YEIvIfTAs~~~YAd~ILd~LD 380 (484)
.|++|+||||+.... ....|.+.+.|+++.+. ..++|-|.....++..+++.++
T Consensus 1 li~~D~DgTL~~~~~----------------------~~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 1 LLFFDLDGTLLDPNA----------------------HELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred CEEEeCcCCCcCCCC----------------------CcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 378999999996420 12358889999999854 8999999999999999998753
No 124
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=90.86 E-value=0.18 Score=50.60 Aligned_cols=100 Identities=17% Similarity=0.176 Sum_probs=68.0
Q ss_pred eeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeecc---------------eeeeCCc----
Q 011504 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRES---------------CIFSDGT---- 401 (484)
Q Consensus 342 V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~LDP~~~lfs~rL~Re~---------------C~~~~g~---- 401 (484)
...-|.+.++++.+. +..-++..|+....+...-++.|---|--|+...+++. -.+.+|.
T Consensus 80 ~lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft~ 159 (252)
T PF11019_consen 80 ELIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILFTG 159 (252)
T ss_pred EEcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCCccccccccCcceecccccCCCCCCceeecCeEEeC
Confidence 556789999999999 67999999999999999988887544433433321111 1122221
Q ss_pred -------ccccccccCCCCCcEEEEECCchhh----ccCCCceeeeccccC
Q 011504 402 -------YTKDLTVLGVDLAKVAIIDNSPQVF----RLQVNNGIPIESWFD 441 (484)
Q Consensus 402 -------yiKDLs~LGrDlskVIIIDDsp~s~----~~qp~NgIpI~sw~~ 441 (484)
...=|..+|+.++++|+|||+.... ..-...+|..-.++-
T Consensus 160 ~~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Y 210 (252)
T PF11019_consen 160 GQDKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFIGFHY 210 (252)
T ss_pred CCccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEE
Confidence 1233456799999999999999755 223347777777653
No 125
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=90.85 E-value=0.59 Score=44.35 Aligned_cols=53 Identities=17% Similarity=0.236 Sum_probs=40.6
Q ss_pred EEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCC
Q 011504 306 LVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDP 381 (484)
Q Consensus 306 LVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~LDP 381 (484)
+++||||||+++.. ...|-..+-|+++. +...+++-|.-....+.++++.|..
T Consensus 1 i~~DlDGTLl~~~~-----------------------~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~ 54 (225)
T TIGR01482 1 IASDIDGTLTDPNR-----------------------AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGT 54 (225)
T ss_pred CeEeccCccCCCCc-----------------------ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCC
Confidence 58999999997531 13455667777777 5589999999888888888888874
No 126
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=90.34 E-value=0.4 Score=47.90 Aligned_cols=49 Identities=18% Similarity=0.326 Sum_probs=41.8
Q ss_pred eeeCchHHHHHHHhh---cceEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEe
Q 011504 342 VKQRPHLKTFLERVA---EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVY 391 (484)
Q Consensus 342 V~lRPgL~eFLe~Ls---k~YEIvIfTAs~~~YAd~ILd~LDP~~~lfs~rL~ 391 (484)
+...||..+|++.++ ..++++|-|.|..-|-+.+|+.-+... .|+.++.
T Consensus 70 ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~-~f~~I~T 121 (234)
T PF06888_consen 70 IPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRD-CFSEIFT 121 (234)
T ss_pred CCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCcc-ccceEEe
Confidence 788999999999994 379999999999999999999988764 5655444
No 127
>PTZ00174 phosphomannomutase; Provisional
Probab=90.26 E-value=0.72 Score=45.44 Aligned_cols=52 Identities=19% Similarity=0.253 Sum_probs=37.3
Q ss_pred ceEEEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHH
Q 011504 303 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLD 377 (484)
Q Consensus 303 K~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd 377 (484)
.+.+++||||||+++.. ..-|...+-|+++. +...++|-|.-...-+.+.++
T Consensus 5 ~klia~DlDGTLL~~~~-----------------------~is~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~l~ 57 (247)
T PTZ00174 5 KTILLFDVDGTLTKPRN-----------------------PITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKEQLG 57 (247)
T ss_pred CeEEEEECcCCCcCCCC-----------------------CCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHh
Confidence 56899999999998631 13466777788887 558888888876654544444
No 128
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=90.00 E-value=0.37 Score=48.00 Aligned_cols=47 Identities=17% Similarity=0.154 Sum_probs=34.7
Q ss_pred eEEEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhh-cceEEEEEcCCcHH
Q 011504 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSI 370 (484)
Q Consensus 304 ~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~ 370 (484)
++++|||||||++..... =..=|++.++|+++. +...+++.|+....
T Consensus 2 k~i~~D~DGtl~~~~~~~--------------------~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~ 49 (257)
T TIGR01458 2 KGVLLDISGVLYISDAKS--------------------GVAVPGSQEAVKRLRGASVKVRFVTNTTKE 49 (257)
T ss_pred CEEEEeCCCeEEeCCCcc--------------------cCcCCCHHHHHHHHHHCCCeEEEEECCCCC
Confidence 478999999998753100 002589999999999 56999999975544
No 129
>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]
Probab=89.62 E-value=0.63 Score=43.67 Aligned_cols=85 Identities=19% Similarity=0.266 Sum_probs=50.3
Q ss_pred eeeCchHHHHHHHhhcceEEEEEcCCcHHH--HHHHHHHhCCCCCce--eEEEeecceeeeCCcccccccccCCCCCcEE
Q 011504 342 VKQRPHLKTFLERVAEMFEVVIFTASQSIY--AAQLLDILDPDGKLI--SRRVYRESCIFSDGTYTKDLTVLGVDLAKVA 417 (484)
Q Consensus 342 V~lRPgL~eFLe~Lsk~YEIvIfTAs~~~Y--Ad~ILd~LDP~~~lf--s~rL~Re~C~~~~g~yiKDLs~LGrDlskVI 417 (484)
...-||+.+-+++|.++|+|+|-||++..| .+.-.+.|--.-.++ ++.+++. . |++-+ -=+
T Consensus 67 L~V~p~aq~v~keLt~~y~vYivtaamdhp~s~~dK~eWl~E~FPFi~~qn~vfCg-----n----Knivk------aDi 131 (180)
T COG4502 67 LGVQPFAQTVLKELTSIYNVYIVTAAMDHPKSCEDKGEWLKEKFPFISYQNIVFCG-----N----KNIVK------ADI 131 (180)
T ss_pred cCccccHHHHHHHHHhhheEEEEEeccCCchhHHHHHHHHHHHCCCCChhhEEEec-----C----CCeEE------eeE
Confidence 566799999999999999999999995433 222222221110011 2233321 1 22211 136
Q ss_pred EEECCchhhccCCCceeeeccccC
Q 011504 418 IIDNSPQVFRLQVNNGIPIESWFD 441 (484)
Q Consensus 418 IIDDsp~s~~~qp~NgIpI~sw~~ 441 (484)
+|||.|........|-|.-..-+.
T Consensus 132 lIDDnp~nLE~F~G~kIlFdA~HN 155 (180)
T COG4502 132 LIDDNPLNLENFKGNKILFDAHHN 155 (180)
T ss_pred EecCCchhhhhccCceEEEecccc
Confidence 899999877666666666555544
No 130
>PLN02645 phosphoglycolate phosphatase
Probab=89.50 E-value=0.47 Score=48.57 Aligned_cols=53 Identities=15% Similarity=0.100 Sum_probs=39.5
Q ss_pred ceEEEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHh
Q 011504 303 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDIL 379 (484)
Q Consensus 303 K~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~L 379 (484)
-+.++||+||||++.. .+ =||+.++|+++. +...+++.|+....-...+++.|
T Consensus 28 ~~~~~~D~DGtl~~~~----------------------~~--~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l 81 (311)
T PLN02645 28 VETFIFDCDGVIWKGD----------------------KL--IEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKF 81 (311)
T ss_pred CCEEEEeCcCCeEeCC----------------------cc--CcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHH
Confidence 3589999999998642 01 289999999998 67999999998854444444443
No 131
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=89.46 E-value=0.94 Score=46.97 Aligned_cols=57 Identities=12% Similarity=0.155 Sum_probs=43.8
Q ss_pred eEEEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCC
Q 011504 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPD 382 (484)
Q Consensus 304 ~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~LDP~ 382 (484)
+.+++||||||++... | .-+-+.+-|+++. +...+++.|+-+..-+..+.+.|...
T Consensus 2 KLIftDLDGTLLd~~~---------------------~--~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~ 58 (302)
T PRK12702 2 RLVLSSLDGSLLDLEF---------------------N--SYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLE 58 (302)
T ss_pred cEEEEeCCCCCcCCCC---------------------c--CCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC
Confidence 5789999999997531 1 1234677788888 56999999999888888888888765
Q ss_pred C
Q 011504 383 G 383 (484)
Q Consensus 383 ~ 383 (484)
.
T Consensus 59 ~ 59 (302)
T PRK12702 59 H 59 (302)
T ss_pred C
Confidence 3
No 132
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=89.44 E-value=0.55 Score=43.89 Aligned_cols=84 Identities=25% Similarity=0.280 Sum_probs=56.7
Q ss_pred eeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEee-cceeee---CC--cc--cc------cc
Q 011504 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYR-ESCIFS---DG--TY--TK------DL 406 (484)
Q Consensus 342 V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~LDP~~~lfs~rL~R-e~C~~~---~g--~y--iK------DL 406 (484)
...+|++.++|+++. +.+.++|-|++...+++.+++.++-.. +|..++.. +.-.+. .| .+ .| -+
T Consensus 86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~-~~~~~l~~~~~g~~~g~~~~~~~~g~~K~~~l~~~~ 164 (202)
T TIGR01490 86 SILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDN-AIGTRLEESEDGIYTGNIDGNNCKGEGKVHALAELL 164 (202)
T ss_pred HhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcc-eEecceEEcCCCEEeCCccCCCCCChHHHHHHHHHH
Confidence 357999999999998 569999999999999999999998765 66654432 110111 00 00 01 12
Q ss_pred cccCCCCCcEEEEECCchhh
Q 011504 407 TVLGVDLAKVAIIDNSPQVF 426 (484)
Q Consensus 407 s~LGrDlskVIIIDDsp~s~ 426 (484)
...+.++++++.+-|++.-.
T Consensus 165 ~~~~~~~~~~~~~gDs~~D~ 184 (202)
T TIGR01490 165 AEEQIDLKDSYAYGDSISDL 184 (202)
T ss_pred HHcCCCHHHcEeeeCCcccH
Confidence 23466777888888877544
No 133
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=89.21 E-value=0.84 Score=45.83 Aligned_cols=60 Identities=15% Similarity=0.072 Sum_probs=42.8
Q ss_pred ceEEEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhhc--ceEEEEEcCCcHHHHHHHHHHhC
Q 011504 303 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE--MFEVVIFTASQSIYAAQLLDILD 380 (484)
Q Consensus 303 K~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Lsk--~YEIvIfTAs~~~YAd~ILd~LD 380 (484)
+..|++|+||||+.....+.. ...-|.+.+-|+.|++ ...++|.|.-...-+..+++.++
T Consensus 14 ~~li~~D~DGTLl~~~~~p~~------------------~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~ 75 (266)
T PRK10187 14 NYAWFFDLDGTLAEIKPHPDQ------------------VVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYR 75 (266)
T ss_pred CEEEEEecCCCCCCCCCCccc------------------ccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCccc
Confidence 679999999999975322210 1234788888999885 57888888888887777765543
No 134
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=88.88 E-value=0.6 Score=46.81 Aligned_cols=41 Identities=20% Similarity=0.262 Sum_probs=32.6
Q ss_pred eEEEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhh-cceEEEEEcCCc
Q 011504 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQ 368 (484)
Q Consensus 304 ~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Ls-k~YEIvIfTAs~ 368 (484)
..+++|+||||++.. ..-||+.++|+++. +...+++.|+..
T Consensus 3 ~~~~~D~DGtl~~~~------------------------~~~~ga~e~l~~L~~~g~~~~~~Tnns 44 (279)
T TIGR01452 3 QGFIFDCDGVLWLGE------------------------RVVPGAPELLDRLARAGKAALFVTNNS 44 (279)
T ss_pred cEEEEeCCCceEcCC------------------------eeCcCHHHHHHHHHHCCCeEEEEeCCC
Confidence 478999999997642 12488999999998 568999999854
No 135
>PLN02423 phosphomannomutase
Probab=87.65 E-value=1.2 Score=44.15 Aligned_cols=55 Identities=18% Similarity=0.367 Sum_probs=36.2
Q ss_pred CCceEEEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhC
Q 011504 301 RKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILD 380 (484)
Q Consensus 301 ~kK~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Lsk~YEIvIfTAs~~~YAd~ILd~LD 380 (484)
+.+..+++||||||+.+.. .+-|...+-|+++.+...++|.|.-. | ..+.+.+.
T Consensus 5 ~~~~i~~~D~DGTLl~~~~-----------------------~i~~~~~~ai~~l~~~i~fviaTGR~--~-~~~~~~~~ 58 (245)
T PLN02423 5 KPGVIALFDVDGTLTAPRK-----------------------EATPEMLEFMKELRKVVTVGVVGGSD--L-SKISEQLG 58 (245)
T ss_pred ccceEEEEeccCCCcCCCC-----------------------cCCHHHHHHHHHHHhCCEEEEECCcC--H-HHHHHHhc
Confidence 3455667999999997631 12466778889998777777777652 2 24555554
Q ss_pred C
Q 011504 381 P 381 (484)
Q Consensus 381 P 381 (484)
+
T Consensus 59 ~ 59 (245)
T PLN02423 59 K 59 (245)
T ss_pred c
Confidence 4
No 136
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=86.58 E-value=1.4 Score=46.43 Aligned_cols=53 Identities=19% Similarity=0.254 Sum_probs=44.3
Q ss_pred eeeeeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHh-C------CCCCceeEEEe
Q 011504 339 TVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDIL-D------PDGKLISRRVY 391 (484)
Q Consensus 339 ~v~V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~L-D------P~~~lfs~rL~ 391 (484)
.-||.+-||+.++|+++. +...+.|-|++...|++.+++.+ + .+..+|+.++.
T Consensus 180 ~~yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt 240 (343)
T TIGR02244 180 EKYVLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIV 240 (343)
T ss_pred HHHhccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEe
Confidence 457888999999999998 56999999999999999999997 5 34556765554
No 137
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=86.43 E-value=2.4 Score=48.54 Aligned_cols=60 Identities=18% Similarity=0.132 Sum_probs=45.9
Q ss_pred CCCceEEEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHH
Q 011504 300 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDI 378 (484)
Q Consensus 300 ~~kK~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~ 378 (484)
..+++.+++||||||++... ++. +...+-|+.+. +...++|.|.-....+..+++.
T Consensus 413 ~~~~KLIfsDLDGTLLd~d~---------------------~i~--~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~ 469 (694)
T PRK14502 413 GQFKKIVYTDLDGTLLNPLT---------------------YSY--STALDALRLLKDKELPLVFCSAKTMGEQDLYRNE 469 (694)
T ss_pred CceeeEEEEECcCCCcCCCC---------------------ccC--HHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHH
Confidence 46788999999999997531 111 23456677777 5699999999999999999999
Q ss_pred hCCC
Q 011504 379 LDPD 382 (484)
Q Consensus 379 LDP~ 382 (484)
|+..
T Consensus 470 Lgl~ 473 (694)
T PRK14502 470 LGIK 473 (694)
T ss_pred cCCC
Confidence 8754
No 138
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=86.38 E-value=1.1 Score=44.32 Aligned_cols=53 Identities=21% Similarity=0.348 Sum_probs=36.4
Q ss_pred EEEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhh-cceEEEEEcCCc---HHHHHHHHHHhC
Q 011504 305 TLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQ---SIYAAQLLDILD 380 (484)
Q Consensus 305 tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Ls-k~YEIvIfTAs~---~~YAd~ILd~LD 380 (484)
.+++|+||||++.. ..=|++.++|+++. +...+++.|... ..-..+.++.+.
T Consensus 3 ~~~~D~DGtl~~~~------------------------~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g 58 (249)
T TIGR01457 3 GYLIDLDGTMYKGK------------------------ERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFD 58 (249)
T ss_pred EEEEeCCCceEcCC------------------------eeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcC
Confidence 78999999998652 01368899999998 568888998633 333334445454
Q ss_pred C
Q 011504 381 P 381 (484)
Q Consensus 381 P 381 (484)
.
T Consensus 59 ~ 59 (249)
T TIGR01457 59 I 59 (249)
T ss_pred C
Confidence 3
No 139
>PLN02887 hydrolase family protein
Probab=85.80 E-value=1.8 Score=48.63 Aligned_cols=58 Identities=22% Similarity=0.209 Sum_probs=45.6
Q ss_pred CceEEEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhC
Q 011504 302 KSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILD 380 (484)
Q Consensus 302 kK~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~LD 380 (484)
+.+.+++||||||+++.. .+-|...+-|+++. +...++|.|.-...-+..+++.++
T Consensus 307 ~iKLIa~DLDGTLLn~d~-----------------------~Is~~t~eAI~kl~ekGi~~vIATGR~~~~i~~~l~~L~ 363 (580)
T PLN02887 307 KFSYIFCDMDGTLLNSKS-----------------------QISETNAKALKEALSRGVKVVIATGKARPAVIDILKMVD 363 (580)
T ss_pred CccEEEEeCCCCCCCCCC-----------------------ccCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhC
Confidence 456899999999997631 12455667788887 679999999999988889999887
Q ss_pred CC
Q 011504 381 PD 382 (484)
Q Consensus 381 P~ 382 (484)
..
T Consensus 364 l~ 365 (580)
T PLN02887 364 LA 365 (580)
T ss_pred cc
Confidence 54
No 140
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=85.59 E-value=1.5 Score=42.98 Aligned_cols=60 Identities=25% Similarity=0.081 Sum_probs=39.7
Q ss_pred ceEEEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhhcce-EEEEEcCCcHHHHHHHHHHhCC
Q 011504 303 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMF-EVVIFTASQSIYAAQLLDILDP 381 (484)
Q Consensus 303 K~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Lsk~Y-EIvIfTAs~~~YAd~ILd~LDP 381 (484)
++.++.||||||+.+.... -...|.+.+.++++.+.. .+++-|.-...-+.++++.+.+
T Consensus 1 ~~li~tDlDGTLl~~~~~~--------------------~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~ 60 (249)
T TIGR01485 1 RLLLVSDLDNTLVDHTDGD--------------------NQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPL 60 (249)
T ss_pred CeEEEEcCCCcCcCCCCCC--------------------hHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCC
Confidence 4678999999999632000 123578888888887555 6666666666666677666654
Q ss_pred C
Q 011504 382 D 382 (484)
Q Consensus 382 ~ 382 (484)
.
T Consensus 61 ~ 61 (249)
T TIGR01485 61 L 61 (249)
T ss_pred C
Confidence 4
No 141
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=83.87 E-value=1.4 Score=45.01 Aligned_cols=52 Identities=17% Similarity=0.196 Sum_probs=38.8
Q ss_pred ceEEEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHH
Q 011504 303 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEM-FEVVIFTASQSIYAAQLLDI 378 (484)
Q Consensus 303 K~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Lsk~-YEIvIfTAs~~~YAd~ILd~ 378 (484)
..++++||||||++-. ..=||+.+||+++.+. -.+++-|++..+-.+.+..+
T Consensus 8 y~~~l~DlDGvl~~G~------------------------~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~ 60 (269)
T COG0647 8 YDGFLFDLDGVLYRGN------------------------EAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAAR 60 (269)
T ss_pred cCEEEEcCcCceEeCC------------------------ccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHH
Confidence 4478999999998753 2349999999999954 88888898876544433333
No 142
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=83.53 E-value=1.4 Score=43.20 Aligned_cols=51 Identities=25% Similarity=0.317 Sum_probs=37.7
Q ss_pred EEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhhc-ceEEEEEcCCc----HHHHHHHHHHhC
Q 011504 306 LVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQ----SIYAAQLLDILD 380 (484)
Q Consensus 306 LVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Lsk-~YEIvIfTAs~----~~YAd~ILd~LD 380 (484)
++||+||||+.... .=|++.++|+.+.+ .+.+++-|++. ..+++.+.+.+.
T Consensus 1 ~lfD~DGvL~~~~~------------------------~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g 56 (236)
T TIGR01460 1 FLFDIDGVLWLGHK------------------------PIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLG 56 (236)
T ss_pred CEEeCcCccCcCCc------------------------cCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcC
Confidence 47999999987631 13689999999985 58999998544 567777766443
No 143
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=83.32 E-value=1.6 Score=43.64 Aligned_cols=92 Identities=13% Similarity=0.128 Sum_probs=54.1
Q ss_pred CCCceEEEEecccccccccccccCCCCceEEEEeccccc-----eeeeeeCchHHHHHHHhh-cceEEEEEcCCcHHHHH
Q 011504 300 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEH-----TVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAA 373 (484)
Q Consensus 300 ~~kK~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~-----~v~V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd 373 (484)
..+|..+|||+|||++....-... ..|.-. .++.... .---..-|++.+|++++. +.++|++.|.-.....+
T Consensus 74 ~dg~~A~V~DIDET~LsN~py~~~-~~~g~~-~~~~~~~~~wv~~~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~ 151 (229)
T TIGR01675 74 GDGMDAWIFDVDDTLLSNIPYYKK-HGYGTE-KTDPTAFWLWLGKGAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRN 151 (229)
T ss_pred CCCCcEEEEccccccccCHHHHHH-hccCCC-cCCHHHHHHHHHcCCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHH
Confidence 357789999999999986521100 001000 0000000 001345799999999997 67999999999887755
Q ss_pred HHHHHhCCCCCc-eeEEEeec
Q 011504 374 QLLDILDPDGKL-ISRRVYRE 393 (484)
Q Consensus 374 ~ILd~LDP~~~l-fs~rL~Re 393 (484)
..++.|.-.|-. +.+.+.|.
T Consensus 152 ~T~~nL~~~G~~~~~~LiLR~ 172 (229)
T TIGR01675 152 ATLDNLINAGFTGWKHLILRG 172 (229)
T ss_pred HHHHHHHHcCCCCcCeeeecC
Confidence 555555444411 24455564
No 144
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=82.35 E-value=1.5 Score=44.37 Aligned_cols=75 Identities=21% Similarity=0.271 Sum_probs=41.7
Q ss_pred CCCceEEEEeccccccccccc----ccCCCCceEEEEeccccceee-----eeeCchHHHHHHHhhcceEEEEE-cCCcH
Q 011504 300 GRKSVTLVLDLDETLVHSTLE----YCDDADFTFTVFFNMKEHTVY-----VKQRPHLKTFLERVAEMFEVVIF-TASQS 369 (484)
Q Consensus 300 ~~kK~tLVLDLDeTLVhSs~~----~~~~~Df~~~v~~~~~~~~v~-----V~lRPgL~eFLe~Lsk~YEIvIf-TAs~~ 369 (484)
..|++.+|+|||||.+..+-. -.....|+ ...-..+ -+.=||+.+||+++-++--.|.| |.-.+
T Consensus 76 k~K~~aVvlDlDETvLdNs~Yqgy~v~nnk~f~------pe~Wd~wV~a~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~ 149 (274)
T COG2503 76 KGKKKAVVLDLDETVLDNSAYQGYQVLNNKGFT------PETWDKWVQAKKSKAVPGAVEFLNYVNSNGGKIFYISNRDQ 149 (274)
T ss_pred cCCCceEEEecchHhhcCccccchhhhcCCCCC------ccchHHHHhhcccccCccHHHHHHHHHhcCcEEEEEeccch
Confidence 455669999999999986521 11111111 0000111 44569999999999876544444 44444
Q ss_pred HH-HHHHHHHhC
Q 011504 370 IY-AAQLLDILD 380 (484)
Q Consensus 370 ~Y-Ad~ILd~LD 380 (484)
.- .+.-++-|-
T Consensus 150 ~~~~~~T~~nLk 161 (274)
T COG2503 150 ENEKDGTIENLK 161 (274)
T ss_pred hcccchhHHHHH
Confidence 43 344444443
No 145
>PLN03017 trehalose-phosphatase
Probab=80.97 E-value=2.7 Score=44.76 Aligned_cols=60 Identities=17% Similarity=0.165 Sum_probs=44.0
Q ss_pred CCCceEEEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHH
Q 011504 300 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLD 377 (484)
Q Consensus 300 ~~kK~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Lsk~YEIvIfTAs~~~YAd~ILd 377 (484)
..++..|+||+||||+--...+ -....-|.+.+-|++|++.+.++|-|--...-+..+++
T Consensus 108 ~~k~~llflD~DGTL~Piv~~p------------------~~a~i~~~~~~aL~~La~~~~vaIvSGR~~~~l~~~~~ 167 (366)
T PLN03017 108 RGKQIVMFLDYDGTLSPIVDDP------------------DKAFMSSKMRRTVKKLAKCFPTAIVTGRCIDKVYNFVK 167 (366)
T ss_pred cCCCeEEEEecCCcCcCCcCCc------------------ccccCCHHHHHHHHHHhcCCcEEEEeCCCHHHHHHhhc
Confidence 3467899999999998321100 01234588889999999999999999888887777743
No 146
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=80.20 E-value=4.3 Score=39.85 Aligned_cols=41 Identities=17% Similarity=0.350 Sum_probs=37.3
Q ss_pred eeeCchHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhCCC
Q 011504 342 VKQRPHLKTFLERVAEM-FEVVIFTASQSIYAAQLLDILDPD 382 (484)
Q Consensus 342 V~lRPgL~eFLe~Lsk~-YEIvIfTAs~~~YAd~ILd~LDP~ 382 (484)
+++|||.++|.+++.++ -.++|-++|+..|..+++..|--+
T Consensus 72 i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgk 113 (220)
T COG4359 72 IKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGK 113 (220)
T ss_pred cccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccc
Confidence 88999999999999955 899999999999999999887644
No 147
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=79.98 E-value=3.4 Score=45.96 Aligned_cols=86 Identities=14% Similarity=0.111 Sum_probs=57.8
Q ss_pred eeeeCchHHHHHHHhhc-ceEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeecceeeeCCcccccccccCCCCCcEEEE
Q 011504 341 YVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAII 419 (484)
Q Consensus 341 ~V~lRPgL~eFLe~Lsk-~YEIvIfTAs~~~YAd~ILd~LDP~~~lfs~rL~Re~C~~~~g~yiKDLs~LGrDlskVIII 419 (484)
.-..||++.++|+++.+ .++++|-|...+.+|+.+++.+..+ +|. .+. +.....-+..+....++++.|
T Consensus 403 ~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~--~~~------~~~--p~~K~~~v~~l~~~~~~v~~V 472 (562)
T TIGR01511 403 EDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN--VRA------EVL--PDDKAALIKELQEKGRVVAMV 472 (562)
T ss_pred cccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc--EEc------cCC--hHHHHHHHHHHHHcCCEEEEE
Confidence 35689999999999985 6999999999999999999998764 221 111 111111222334456789999
Q ss_pred ECCchhhccCCCceeee
Q 011504 420 DNSPQVFRLQVNNGIPI 436 (484)
Q Consensus 420 DDsp~s~~~qp~NgIpI 436 (484)
-|...-...-...++.|
T Consensus 473 GDg~nD~~al~~A~vgi 489 (562)
T TIGR01511 473 GDGINDAPALAQADVGI 489 (562)
T ss_pred eCCCccHHHHhhCCEEE
Confidence 98876443333344444
No 148
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=79.64 E-value=1.7 Score=42.66 Aligned_cols=48 Identities=19% Similarity=0.173 Sum_probs=32.6
Q ss_pred CceEEEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhhcceEEE--EEcCC
Q 011504 302 KSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVV--IFTAS 367 (484)
Q Consensus 302 kK~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Lsk~YEIv--IfTAs 367 (484)
|+..|+||+||||+-....+ -....-|++.+.|+.|.+....+ |-|.-
T Consensus 2 ~~~~l~lD~DGTL~~~~~~p------------------~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR 51 (244)
T TIGR00685 2 RKRAFFFDYDGTLSEIVPDP------------------DAAVVSDRLLTILQKLAARPHNAIWIISGR 51 (244)
T ss_pred CcEEEEEecCccccCCcCCC------------------cccCCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 56789999999998532111 11234689999999999876554 44443
No 149
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=79.56 E-value=2.1 Score=39.71 Aligned_cols=79 Identities=19% Similarity=0.191 Sum_probs=58.5
Q ss_pred eeeeCchHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeecce-eeeCCcccccccccCCCCCcEEE
Q 011504 341 YVKQRPHLKTFLERVAEM-FEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESC-IFSDGTYTKDLTVLGVDLAKVAI 418 (484)
Q Consensus 341 ~V~lRPgL~eFLe~Lsk~-YEIvIfTAs~~~YAd~ILd~LDP~~~lfs~rL~Re~C-~~~~g~yiKDLs~LGrDlskVII 418 (484)
.-.+||++.++|++|.+. +.++|.|......|..+.+.++... ..++.+.. ...+..+.+-++.|+.+.+.|+.
T Consensus 125 ~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~----~~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~ 200 (215)
T PF00702_consen 125 RDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD----SIVFARVIGKPEPKIFLRIIKELQVKPGEVAM 200 (215)
T ss_dssp EEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS----EEEEESHETTTHHHHHHHHHHHHTCTGGGEEE
T ss_pred cCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc----ccccccccccccchhHHHHHHHHhcCCCEEEE
Confidence 356799999999999964 9999999999999999999998743 22222211 11112335556667878889999
Q ss_pred EECCc
Q 011504 419 IDNSP 423 (484)
Q Consensus 419 IDDsp 423 (484)
|-|..
T Consensus 201 vGDg~ 205 (215)
T PF00702_consen 201 VGDGV 205 (215)
T ss_dssp EESSG
T ss_pred EccCH
Confidence 99876
No 150
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=78.55 E-value=1.2 Score=40.99 Aligned_cols=16 Identities=25% Similarity=0.553 Sum_probs=14.1
Q ss_pred ceEEEEeccccccccc
Q 011504 303 SVTLVLDLDETLVHST 318 (484)
Q Consensus 303 K~tLVLDLDeTLVhSs 318 (484)
.+.++||+||||++|.
T Consensus 5 ~~~viFD~DGTLiDs~ 20 (188)
T PRK10725 5 YAGLIFDMDGTILDTE 20 (188)
T ss_pred ceEEEEcCCCcCccCH
Confidence 4579999999999986
No 151
>PLN02151 trehalose-phosphatase
Probab=78.50 E-value=4 Score=43.31 Aligned_cols=60 Identities=15% Similarity=0.205 Sum_probs=45.3
Q ss_pred CCCceEEEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHH
Q 011504 300 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLD 377 (484)
Q Consensus 300 ~~kK~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Lsk~YEIvIfTAs~~~YAd~ILd 377 (484)
..++..|+||+||||+--... .-.+..-|.+.+-|+.|++.+.++|-|--...-++.++.
T Consensus 95 ~~~~~ll~lDyDGTL~PIv~~------------------P~~A~~~~~~~~aL~~La~~~~vaIvSGR~~~~l~~~~~ 154 (354)
T PLN02151 95 EGKQIVMFLDYDGTLSPIVDD------------------PDRAFMSKKMRNTVRKLAKCFPTAIVSGRCREKVSSFVK 154 (354)
T ss_pred cCCceEEEEecCccCCCCCCC------------------cccccCCHHHHHHHHHHhcCCCEEEEECCCHHHHHHHcC
Confidence 446789999999999833211 112445789999999999989999999888877777664
No 152
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=78.37 E-value=1.1 Score=44.83 Aligned_cols=41 Identities=17% Similarity=0.420 Sum_probs=35.8
Q ss_pred eeeCchHHHHHHHhhc--ceEEEEEcCCcHHHHHHHHHHhCCC
Q 011504 342 VKQRPHLKTFLERVAE--MFEVVIFTASQSIYAAQLLDILDPD 382 (484)
Q Consensus 342 V~lRPgL~eFLe~Lsk--~YEIvIfTAs~~~YAd~ILd~LDP~ 382 (484)
+-.-||.-+.++.+++ .||++|-+-+..-+.+.+|++.+..
T Consensus 83 iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~ 125 (256)
T KOG3120|consen 83 IPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIH 125 (256)
T ss_pred CCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHH
Confidence 5677999999999984 3899999999999999999997643
No 153
>PRK11587 putative phosphatase; Provisional
Probab=78.07 E-value=1.2 Score=42.70 Aligned_cols=16 Identities=44% Similarity=0.561 Sum_probs=14.1
Q ss_pred ceEEEEeccccccccc
Q 011504 303 SVTLVLDLDETLVHST 318 (484)
Q Consensus 303 K~tLVLDLDeTLVhSs 318 (484)
.++++|||||||+++.
T Consensus 3 ~k~viFDlDGTL~Ds~ 18 (218)
T PRK11587 3 CKGFLFDLDGTLVDSL 18 (218)
T ss_pred CCEEEEcCCCCcCcCH
Confidence 3589999999999986
No 154
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=77.99 E-value=3.9 Score=41.74 Aligned_cols=61 Identities=20% Similarity=0.151 Sum_probs=46.4
Q ss_pred CCCCceEEEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhhcceE--EEEEcCCcHHHHHHHH
Q 011504 299 QGRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFE--VVIFTASQSIYAAQLL 376 (484)
Q Consensus 299 ~~~kK~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Lsk~YE--IvIfTAs~~~YAd~IL 376 (484)
...+|.+++||.||||++....+. -+..=+++.+.|..|+..+. ++|.|.-+..-.+..+
T Consensus 14 ~~a~~~~~~lDyDGTl~~i~~~p~------------------~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~ 75 (266)
T COG1877 14 LNARKRLLFLDYDGTLTEIVPHPE------------------AAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLF 75 (266)
T ss_pred ccccceEEEEeccccccccccCcc------------------ccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhc
Confidence 345678999999999998753331 23445789999999998888 7777887777777766
Q ss_pred H
Q 011504 377 D 377 (484)
Q Consensus 377 d 377 (484)
.
T Consensus 76 ~ 76 (266)
T COG1877 76 G 76 (266)
T ss_pred C
Confidence 6
No 155
>PLN02580 trehalose-phosphatase
Probab=76.61 E-value=4.8 Score=43.14 Aligned_cols=61 Identities=20% Similarity=0.243 Sum_probs=47.4
Q ss_pred CCCceEEEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHHH
Q 011504 300 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDI 378 (484)
Q Consensus 300 ~~kK~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Lsk~YEIvIfTAs~~~YAd~ILd~ 378 (484)
..++..|+||.||||+--... .--+..-|.+.+-|+.|++.+.++|-|--...-.+.++..
T Consensus 116 ~~k~~~LfLDyDGTLaPIv~~------------------Pd~A~~s~~~~~aL~~La~~~~VAIVSGR~~~~L~~~l~~ 176 (384)
T PLN02580 116 KGKKIALFLDYDGTLSPIVDD------------------PDRALMSDAMRSAVKNVAKYFPTAIISGRSRDKVYELVGL 176 (384)
T ss_pred hcCCeEEEEecCCccCCCCCC------------------cccccCCHHHHHHHHHHhhCCCEEEEeCCCHHHHHHHhCC
Confidence 456789999999999743211 1124556899999999999999999999988888877753
No 156
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=75.65 E-value=2.6 Score=41.66 Aligned_cols=69 Identities=16% Similarity=0.143 Sum_probs=40.8
Q ss_pred CCceEEEEeccccccccccc----cc-----CCCCceEEEEeccccceeeeeeCchHHHHHHHhh-cceEEEEEcCCcHH
Q 011504 301 RKSVTLVLDLDETLVHSTLE----YC-----DDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSI 370 (484)
Q Consensus 301 ~kK~tLVLDLDeTLVhSs~~----~~-----~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~ 370 (484)
.++..+|||+||||+..... .. ...+|.-.+ . . .. -..=|++.+|++++. +.++|++-|.-...
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv--~-~--~~-~~aip~a~~l~~~~~~~G~~V~~iT~R~~~ 143 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWV--A-S--GK-APAIPGALELYNYARSRGVKVFFITGRPES 143 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHH--H-C--TG-GEEETTHHHHHHHHHHTTEEEEEEEEEETT
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHH--h-c--cc-CcccHHHHHHHHHHHHCCCeEEEEecCCch
Confidence 56789999999999865321 00 011111000 0 0 00 144588999999999 55899888875554
Q ss_pred HHHHH
Q 011504 371 YAAQL 375 (484)
Q Consensus 371 YAd~I 375 (484)
.-+.-
T Consensus 144 ~r~~T 148 (229)
T PF03767_consen 144 QREAT 148 (229)
T ss_dssp CHHHH
T ss_pred hHHHH
Confidence 33333
No 157
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=74.80 E-value=1.4 Score=41.49 Aligned_cols=14 Identities=36% Similarity=0.648 Sum_probs=12.7
Q ss_pred EEEEeccccccccc
Q 011504 305 TLVLDLDETLVHST 318 (484)
Q Consensus 305 tLVLDLDeTLVhSs 318 (484)
.+||||||||+.|.
T Consensus 2 ~viFD~DGTLiDs~ 15 (197)
T TIGR01548 2 ALVLDMDGVMADVS 15 (197)
T ss_pred ceEEecCceEEech
Confidence 58999999999986
No 158
>PRK11590 hypothetical protein; Provisional
Probab=73.45 E-value=1.9 Score=41.35 Aligned_cols=39 Identities=18% Similarity=0.066 Sum_probs=34.9
Q ss_pred eeeCchHHHHH-HHhh-cceEEEEEcCCcHHHHHHHHHHhC
Q 011504 342 VKQRPHLKTFL-ERVA-EMFEVVIFTASQSIYAAQLLDILD 380 (484)
Q Consensus 342 V~lRPgL~eFL-e~Ls-k~YEIvIfTAs~~~YAd~ILd~LD 380 (484)
+..+||+.+.| +.+. +.+.++|-|++.+.|+++++..+.
T Consensus 94 ~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~ 134 (211)
T PRK11590 94 VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTP 134 (211)
T ss_pred CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcc
Confidence 45689999999 5677 589999999999999999999977
No 159
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=72.88 E-value=1.9 Score=39.83 Aligned_cols=14 Identities=36% Similarity=0.508 Sum_probs=12.5
Q ss_pred EEEEeccccccccc
Q 011504 305 TLVLDLDETLVHST 318 (484)
Q Consensus 305 tLVLDLDeTLVhSs 318 (484)
.++|||||||+.+.
T Consensus 2 ~viFDlDGTL~ds~ 15 (184)
T TIGR01993 2 VWFFDLDNTLYPHS 15 (184)
T ss_pred eEEEeCCCCCCCCc
Confidence 58999999999885
No 160
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=71.81 E-value=2.2 Score=40.34 Aligned_cols=15 Identities=33% Similarity=0.731 Sum_probs=13.4
Q ss_pred eEEEEeccccccccc
Q 011504 304 VTLVLDLDETLVHST 318 (484)
Q Consensus 304 ~tLVLDLDeTLVhSs 318 (484)
+.++|||||||+++.
T Consensus 3 ~~viFDlDGTL~ds~ 17 (221)
T TIGR02253 3 KAIFFDLDDTLIDTS 17 (221)
T ss_pred eEEEEeCCCCCcCCC
Confidence 479999999999985
No 161
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=71.34 E-value=2.1 Score=40.56 Aligned_cols=15 Identities=33% Similarity=0.412 Sum_probs=13.4
Q ss_pred eEEEEeccccccccc
Q 011504 304 VTLVLDLDETLVHST 318 (484)
Q Consensus 304 ~tLVLDLDeTLVhSs 318 (484)
++++||+||||+++.
T Consensus 2 k~iiFD~DGTL~ds~ 16 (220)
T TIGR03351 2 SLVVLDMAGTTVDED 16 (220)
T ss_pred cEEEEecCCCeeccC
Confidence 578999999999986
No 162
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=71.27 E-value=6.3 Score=43.66 Aligned_cols=87 Identities=14% Similarity=0.083 Sum_probs=60.3
Q ss_pred eeeeCchHHHHHHHhh-cc-eEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeecceeeeCCcccccccccCCCCCcEEE
Q 011504 341 YVKQRPHLKTFLERVA-EM-FEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAI 418 (484)
Q Consensus 341 ~V~lRPgL~eFLe~Ls-k~-YEIvIfTAs~~~YAd~ILd~LDP~~~lfs~rL~Re~C~~~~g~yiKDLs~LGrDlskVII 418 (484)
....|||+.+.|++|. +. +.++|-|...+.+|+.+++.++-.. +|... . ...-.+-++.++....+++.
T Consensus 382 ~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~-~f~~~-~-------p~~K~~~v~~l~~~~~~v~~ 452 (556)
T TIGR01525 382 RDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDE-VHAEL-L-------PEDKLAIVKELQEEGGVVAM 452 (556)
T ss_pred cccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCe-eeccC-C-------HHHHHHHHHHHHHcCCEEEE
Confidence 3568999999999997 56 9999999999999999999998864 44321 1 11112223344445568999
Q ss_pred EECCchhhccCCCceeee
Q 011504 419 IDNSPQVFRLQVNNGIPI 436 (484)
Q Consensus 419 IDDsp~s~~~qp~NgIpI 436 (484)
|-|...-...-...++-|
T Consensus 453 vGDg~nD~~al~~A~vgi 470 (556)
T TIGR01525 453 VGDGINDAPALAAADVGI 470 (556)
T ss_pred EECChhHHHHHhhCCEeE
Confidence 999986553333344444
No 163
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=70.74 E-value=2.1 Score=39.06 Aligned_cols=15 Identities=20% Similarity=0.576 Sum_probs=13.5
Q ss_pred eEEEEeccccccccc
Q 011504 304 VTLVLDLDETLVHST 318 (484)
Q Consensus 304 ~tLVLDLDeTLVhSs 318 (484)
+.++||+||||+.+.
T Consensus 2 ~~iiFD~DGTL~ds~ 16 (185)
T TIGR02009 2 KAVIFDMDGVIVDTA 16 (185)
T ss_pred CeEEEcCCCcccCCh
Confidence 478999999999986
No 164
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=70.10 E-value=2.7 Score=42.17 Aligned_cols=20 Identities=20% Similarity=0.323 Sum_probs=16.7
Q ss_pred CCCCceEEEEeccccccccc
Q 011504 299 QGRKSVTLVLDLDETLVHST 318 (484)
Q Consensus 299 ~~~kK~tLVLDLDeTLVhSs 318 (484)
.....+.+||||||||++|.
T Consensus 20 ~~~~~k~vIFDlDGTLvDS~ 39 (260)
T PLN03243 20 LGCGWLGVVLEWEGVIVEDD 39 (260)
T ss_pred hcCCceEEEEeCCCceeCCc
Confidence 34567789999999999984
No 165
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=69.74 E-value=2.6 Score=41.16 Aligned_cols=15 Identities=20% Similarity=0.215 Sum_probs=13.4
Q ss_pred eEEEEeccccccccc
Q 011504 304 VTLVLDLDETLVHST 318 (484)
Q Consensus 304 ~tLVLDLDeTLVhSs 318 (484)
+.++||+||||+.+.
T Consensus 3 k~viFD~DGTLiDs~ 17 (253)
T TIGR01422 3 EAVIFDWAGTTVDFG 17 (253)
T ss_pred eEEEEeCCCCeecCC
Confidence 589999999999974
No 166
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=69.47 E-value=2.2 Score=42.90 Aligned_cols=92 Identities=14% Similarity=0.045 Sum_probs=68.3
Q ss_pred eeeeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeecceee---eCCcccccccccCCCCCc
Q 011504 340 VYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIF---SDGTYTKDLTVLGVDLAK 415 (484)
Q Consensus 340 v~V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~LDP~~~lfs~rL~Re~C~~---~~g~yiKDLs~LGrDlsk 415 (484)
.+....|-+ ++|++++ +.+.|+|.|+...++= .++..++.. .+|++.+..-.-.. ....|.+-|+++|..++.
T Consensus 111 ~~~~~~~~~-~~lq~lR~~g~~l~iisN~d~r~~-~~l~~~~l~-~~fD~vv~S~e~g~~KPDp~If~~al~~l~v~Pee 187 (237)
T KOG3085|consen 111 AWKYLDGMQ-ELLQKLRKKGTILGIISNFDDRLR-LLLLPLGLS-AYFDFVVESCEVGLEKPDPRIFQLALERLGVKPEE 187 (237)
T ss_pred CceeccHHH-HHHHHHHhCCeEEEEecCCcHHHH-HHhhccCHH-HhhhhhhhhhhhccCCCChHHHHHHHHHhCCChHH
Confidence 345556666 9999999 6789999999999887 777777776 58888776222112 245788899999999999
Q ss_pred EEEEECCchh-hccCCCcee
Q 011504 416 VAIIDNSPQV-FRLQVNNGI 434 (484)
Q Consensus 416 VIIIDDsp~s-~~~qp~NgI 434 (484)
+|.|||.... +....+-|+
T Consensus 188 ~vhIgD~l~nD~~gA~~~G~ 207 (237)
T KOG3085|consen 188 CVHIGDLLENDYEGARNLGW 207 (237)
T ss_pred eEEecCccccccHhHHHcCC
Confidence 9999999987 544333333
No 167
>PRK11590 hypothetical protein; Provisional
Probab=69.47 E-value=7.3 Score=37.34 Aligned_cols=17 Identities=29% Similarity=0.421 Sum_probs=14.1
Q ss_pred CceEEEEeccccccccc
Q 011504 302 KSVTLVLDLDETLVHST 318 (484)
Q Consensus 302 kK~tLVLDLDeTLVhSs 318 (484)
++++++|||||||++..
T Consensus 5 ~~k~~iFD~DGTL~~~d 21 (211)
T PRK11590 5 ERRVVFFDLDGTLHQQD 21 (211)
T ss_pred cceEEEEecCCCCcccc
Confidence 45699999999999654
No 168
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=69.17 E-value=2.8 Score=42.10 Aligned_cols=16 Identities=44% Similarity=0.576 Sum_probs=14.1
Q ss_pred ceEEEEeccccccccc
Q 011504 303 SVTLVLDLDETLVHST 318 (484)
Q Consensus 303 K~tLVLDLDeTLVhSs 318 (484)
++.++|||||||+++.
T Consensus 13 ~k~viFDlDGTL~Ds~ 28 (272)
T PRK13223 13 PRLVMFDLDGTLVDSV 28 (272)
T ss_pred CCEEEEcCCCccccCH
Confidence 3499999999999985
No 169
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=68.94 E-value=2.7 Score=41.37 Aligned_cols=16 Identities=31% Similarity=0.453 Sum_probs=14.0
Q ss_pred ceEEEEeccccccccc
Q 011504 303 SVTLVLDLDETLVHST 318 (484)
Q Consensus 303 K~tLVLDLDeTLVhSs 318 (484)
-+.++|||||||++|.
T Consensus 22 ~k~viFDlDGTLiDs~ 37 (248)
T PLN02770 22 LEAVLFDVDGTLCDSD 37 (248)
T ss_pred cCEEEEcCCCccCcCH
Confidence 3589999999999986
No 170
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=68.80 E-value=2.4 Score=39.65 Aligned_cols=14 Identities=21% Similarity=0.211 Sum_probs=12.6
Q ss_pred EEEEeccccccccc
Q 011504 305 TLVLDLDETLVHST 318 (484)
Q Consensus 305 tLVLDLDeTLVhSs 318 (484)
.++|||||||+.+.
T Consensus 2 ~viFDlDGTL~d~~ 15 (203)
T TIGR02252 2 LITFDAVGTLLALK 15 (203)
T ss_pred eEEEecCCceeeeC
Confidence 68999999999874
No 171
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=68.65 E-value=2.6 Score=41.68 Aligned_cols=16 Identities=19% Similarity=0.173 Sum_probs=13.9
Q ss_pred ceEEEEeccccccccc
Q 011504 303 SVTLVLDLDETLVHST 318 (484)
Q Consensus 303 K~tLVLDLDeTLVhSs 318 (484)
-++++||+||||+++.
T Consensus 4 ~k~vIFDlDGTLiDs~ 19 (267)
T PRK13478 4 IQAVIFDWAGTTVDFG 19 (267)
T ss_pred eEEEEEcCCCCeecCC
Confidence 3589999999999984
No 172
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=67.64 E-value=3 Score=40.69 Aligned_cols=16 Identities=38% Similarity=0.551 Sum_probs=13.7
Q ss_pred ceEEEEeccccccccc
Q 011504 303 SVTLVLDLDETLVHST 318 (484)
Q Consensus 303 K~tLVLDLDeTLVhSs 318 (484)
-+.++|||||||+.+.
T Consensus 10 ~k~iiFDlDGTL~D~~ 25 (238)
T PRK10748 10 ISALTFDLDDTLYDNR 25 (238)
T ss_pred ceeEEEcCcccccCCh
Confidence 3589999999999974
No 173
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=66.28 E-value=10 Score=43.55 Aligned_cols=62 Identities=23% Similarity=0.222 Sum_probs=44.8
Q ss_pred CCCceEEEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhhc--ceEEEEEcCCcHHHHHHHHH
Q 011504 300 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE--MFEVVIFTASQSIYAAQLLD 377 (484)
Q Consensus 300 ~~kK~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Lsk--~YEIvIfTAs~~~YAd~ILd 377 (484)
..++..+++|+||||+.....+. ....-|.+.+.|+.|.+ ...++|-|.-.....++++.
T Consensus 489 ~~~~rLi~~D~DGTL~~~~~~~~------------------~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~ 550 (726)
T PRK14501 489 AASRRLLLLDYDGTLVPFAPDPE------------------LAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFG 550 (726)
T ss_pred hccceEEEEecCccccCCCCCcc------------------cCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhC
Confidence 45678999999999995321110 11235788899999997 78899999988887777665
Q ss_pred Hh
Q 011504 378 IL 379 (484)
Q Consensus 378 ~L 379 (484)
.+
T Consensus 551 ~~ 552 (726)
T PRK14501 551 DL 552 (726)
T ss_pred CC
Confidence 43
No 174
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=65.71 E-value=2.4 Score=39.90 Aligned_cols=13 Identities=54% Similarity=0.708 Sum_probs=11.9
Q ss_pred EEEeccccccccc
Q 011504 306 LVLDLDETLVHST 318 (484)
Q Consensus 306 LVLDLDeTLVhSs 318 (484)
+||||||||+.+.
T Consensus 1 iiFDlDGTL~Ds~ 13 (205)
T TIGR01454 1 VVFDLDGVLVDSF 13 (205)
T ss_pred CeecCcCccccCH
Confidence 5899999999986
No 175
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=65.31 E-value=5.5 Score=44.04 Aligned_cols=87 Identities=14% Similarity=0.126 Sum_probs=61.9
Q ss_pred eeeeCchHHHHHHHhhc-ce-EEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeecceeeeCCcccccccccCCCCCcEEE
Q 011504 341 YVKQRPHLKTFLERVAE-MF-EVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAI 418 (484)
Q Consensus 341 ~V~lRPgL~eFLe~Lsk-~Y-EIvIfTAs~~~YAd~ILd~LDP~~~lfs~rL~Re~C~~~~g~yiKDLs~LGrDlskVII 418 (484)
....||++.+.|++|.+ .+ +++|-|...+.+|+.+++.++..+ +|.... .....+-++.++...++++.
T Consensus 360 ~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~-~f~~~~--------p~~K~~~i~~l~~~~~~v~~ 430 (536)
T TIGR01512 360 SDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE-VHAELL--------PEDKLEIVKELREKYGPVAM 430 (536)
T ss_pred eccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh-hhhccC--------cHHHHHHHHHHHhcCCEEEE
Confidence 46789999999999995 68 999999999999999999998864 442111 11113344455666689999
Q ss_pred EECCchhhccCCCceeee
Q 011504 419 IDNSPQVFRLQVNNGIPI 436 (484)
Q Consensus 419 IDDsp~s~~~qp~NgIpI 436 (484)
|-|...-...-...++.|
T Consensus 431 vGDg~nD~~al~~A~vgi 448 (536)
T TIGR01512 431 VGDGINDAPALAAADVGI 448 (536)
T ss_pred EeCCHHHHHHHHhCCEEE
Confidence 999986554333344433
No 176
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=65.06 E-value=3 Score=38.06 Aligned_cols=14 Identities=21% Similarity=0.605 Sum_probs=12.5
Q ss_pred EEEEeccccccccc
Q 011504 305 TLVLDLDETLVHST 318 (484)
Q Consensus 305 tLVLDLDeTLVhSs 318 (484)
.+|||+||||+.+.
T Consensus 1 ~iiFD~DGTL~ds~ 14 (185)
T TIGR01990 1 AVIFDLDGVITDTA 14 (185)
T ss_pred CeEEcCCCccccCh
Confidence 37999999999987
No 177
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=64.88 E-value=9.8 Score=37.76 Aligned_cols=55 Identities=24% Similarity=0.230 Sum_probs=35.5
Q ss_pred CceEEEEecccccc-cccccccCCCCceEEEEeccccceeeeeeCchHHHHHH-HhhcceEEEEEcCCcHHHHHHHHHHh
Q 011504 302 KSVTLVLDLDETLV-HSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLE-RVAEMFEVVIFTASQSIYAAQLLDIL 379 (484)
Q Consensus 302 kK~tLVLDLDeTLV-hSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe-~Lsk~YEIvIfTAs~~~YAd~ILd~L 379 (484)
+++.|+.||||||+ ... .-+.-+.++|+ ......-+++-|.-+..-+..++...
T Consensus 1 ~~~ll~sDlD~Tl~~~~~------------------------~~~~~l~~~l~~~~~~~~~~v~~TGRs~~~~~~~~~~~ 56 (247)
T PF05116_consen 1 PPRLLASDLDGTLIDGDD------------------------EALARLEELLEQQARPEILFVYVTGRSLESVLRLLREY 56 (247)
T ss_dssp -SEEEEEETBTTTBHCHH------------------------HHHHHHHHHHHHHHCCGEEEEEE-SS-HHHHHHHHHHC
T ss_pred CCEEEEEECCCCCcCCCH------------------------HHHHHHHHHHHHhhCCCceEEEECCCCHHHHHHHHHhC
Confidence 36789999999999 210 01344556666 33356777777888888888888865
Q ss_pred C
Q 011504 380 D 380 (484)
Q Consensus 380 D 380 (484)
.
T Consensus 57 ~ 57 (247)
T PF05116_consen 57 N 57 (247)
T ss_dssp T
T ss_pred C
Confidence 3
No 178
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=64.50 E-value=20 Score=36.27 Aligned_cols=59 Identities=19% Similarity=0.207 Sum_probs=40.8
Q ss_pred ceEEEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCC
Q 011504 303 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDP 381 (484)
Q Consensus 303 K~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~LDP 381 (484)
.+.+.+|||+||+-...++.+ +..-+.++. ..|+||.-|+-++.=-..+-+.|+.
T Consensus 7 ~~lIFtDlD~TLl~~~ye~~p------------------------A~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v 62 (274)
T COG3769 7 PLLIFTDLDGTLLPHSYEWQP------------------------AAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGV 62 (274)
T ss_pred ceEEEEcccCcccCCCCCCCc------------------------cchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCC
Confidence 457888999999974333211 123345555 6799999998888777777788888
Q ss_pred CCCc
Q 011504 382 DGKL 385 (484)
Q Consensus 382 ~~~l 385 (484)
.+..
T Consensus 63 ~~~p 66 (274)
T COG3769 63 QGLP 66 (274)
T ss_pred CCCc
Confidence 7643
No 179
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=64.07 E-value=16 Score=35.45 Aligned_cols=38 Identities=13% Similarity=0.038 Sum_probs=33.9
Q ss_pred eeeCchHHHHHH-Hhh-cceEEEEEcCCcHHHHHHHHHHh
Q 011504 342 VKQRPHLKTFLE-RVA-EMFEVVIFTASQSIYAAQLLDIL 379 (484)
Q Consensus 342 V~lRPgL~eFLe-~Ls-k~YEIvIfTAs~~~YAd~ILd~L 379 (484)
+.++|++.+.|+ .+. +.+.++|-|++...|++++++..
T Consensus 93 ~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~ 132 (210)
T TIGR01545 93 VTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDS 132 (210)
T ss_pred CCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhc
Confidence 367999999995 777 69999999999999999999774
No 180
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=64.02 E-value=4.1 Score=38.93 Aligned_cols=17 Identities=24% Similarity=0.505 Sum_probs=14.5
Q ss_pred CceEEEEeccccccccc
Q 011504 302 KSVTLVLDLDETLVHST 318 (484)
Q Consensus 302 kK~tLVLDLDeTLVhSs 318 (484)
+.+.++||+||||+++.
T Consensus 6 ~~k~iiFD~DGTL~d~~ 22 (222)
T PRK10826 6 QILAAIFDMDGLLIDSE 22 (222)
T ss_pred cCcEEEEcCCCCCCcCH
Confidence 35689999999999885
No 181
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=63.41 E-value=2.8 Score=39.26 Aligned_cols=13 Identities=54% Similarity=0.802 Sum_probs=11.7
Q ss_pred EEEeccccccccc
Q 011504 306 LVLDLDETLVHST 318 (484)
Q Consensus 306 LVLDLDeTLVhSs 318 (484)
+|||+||||+.|.
T Consensus 1 viFD~DGTL~Ds~ 13 (213)
T TIGR01449 1 VLFDLDGTLVDSA 13 (213)
T ss_pred CeecCCCccccCH
Confidence 5899999999975
No 182
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=62.77 E-value=4.1 Score=41.32 Aligned_cols=17 Identities=29% Similarity=0.415 Sum_probs=14.7
Q ss_pred CceEEEEeccccccccc
Q 011504 302 KSVTLVLDLDETLVHST 318 (484)
Q Consensus 302 kK~tLVLDLDeTLVhSs 318 (484)
+-+.+|||+||||+++.
T Consensus 39 ~~k~VIFDlDGTLvDS~ 55 (286)
T PLN02779 39 LPEALLFDCDGVLVETE 55 (286)
T ss_pred CCcEEEEeCceeEEccc
Confidence 34589999999999986
No 183
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=62.67 E-value=3.8 Score=38.54 Aligned_cols=15 Identities=40% Similarity=0.654 Sum_probs=13.3
Q ss_pred eEEEEeccccccccc
Q 011504 304 VTLVLDLDETLVHST 318 (484)
Q Consensus 304 ~tLVLDLDeTLVhSs 318 (484)
+.++||+||||+++.
T Consensus 2 k~viFD~DGTL~d~~ 16 (224)
T TIGR02254 2 KTLLFDLDDTILDFQ 16 (224)
T ss_pred CEEEEcCcCcccccc
Confidence 479999999999975
No 184
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=62.32 E-value=4.5 Score=37.35 Aligned_cols=16 Identities=31% Similarity=0.439 Sum_probs=13.4
Q ss_pred ceEEEEeccccccccc
Q 011504 303 SVTLVLDLDETLVHST 318 (484)
Q Consensus 303 K~tLVLDLDeTLVhSs 318 (484)
.+++|||+||||+.+.
T Consensus 4 ~k~viFD~DGTLid~~ 19 (201)
T TIGR01491 4 IKLIIFDLDGTLTDVM 19 (201)
T ss_pred ceEEEEeCCCCCcCCc
Confidence 3589999999999853
No 185
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=62.24 E-value=3.7 Score=37.35 Aligned_cols=13 Identities=38% Similarity=0.516 Sum_probs=11.8
Q ss_pred EEEeccccccccc
Q 011504 306 LVLDLDETLVHST 318 (484)
Q Consensus 306 LVLDLDeTLVhSs 318 (484)
|+|||||||+.+.
T Consensus 2 viFD~DGTL~D~~ 14 (175)
T TIGR01493 2 MVFDVYGTLVDVH 14 (175)
T ss_pred eEEecCCcCcccH
Confidence 7999999999975
No 186
>PRK09449 dUMP phosphatase; Provisional
Probab=62.07 E-value=3.9 Score=38.89 Aligned_cols=14 Identities=43% Similarity=0.520 Sum_probs=12.3
Q ss_pred eEEEEecccccccc
Q 011504 304 VTLVLDLDETLVHS 317 (484)
Q Consensus 304 ~tLVLDLDeTLVhS 317 (484)
++++|||||||++.
T Consensus 4 k~iiFDlDGTLid~ 17 (224)
T PRK09449 4 DWILFDADETLFHF 17 (224)
T ss_pred cEEEEcCCCchhcc
Confidence 58999999999974
No 187
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=62.05 E-value=4 Score=38.11 Aligned_cols=15 Identities=33% Similarity=0.377 Sum_probs=13.1
Q ss_pred eEEEEeccccccccc
Q 011504 304 VTLVLDLDETLVHST 318 (484)
Q Consensus 304 ~tLVLDLDeTLVhSs 318 (484)
+.++||+||||+++.
T Consensus 2 k~viFD~dgTLiD~~ 16 (198)
T TIGR01428 2 KALVFDVYGTLFDVH 16 (198)
T ss_pred cEEEEeCCCcCccHH
Confidence 379999999999975
No 188
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=61.77 E-value=4.5 Score=38.18 Aligned_cols=15 Identities=20% Similarity=0.419 Sum_probs=13.1
Q ss_pred eEEEEeccccccccc
Q 011504 304 VTLVLDLDETLVHST 318 (484)
Q Consensus 304 ~tLVLDLDeTLVhSs 318 (484)
+.+||||||||+++.
T Consensus 3 k~viFDldGtL~d~~ 17 (211)
T TIGR02247 3 KAVIFDFGGVLLPSP 17 (211)
T ss_pred eEEEEecCCceecCH
Confidence 479999999999874
No 189
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=61.47 E-value=12 Score=36.28 Aligned_cols=54 Identities=19% Similarity=0.151 Sum_probs=34.1
Q ss_pred EEEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhhcceEEEEEcCCcHHHHHHHHHHhCCC
Q 011504 305 TLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPD 382 (484)
Q Consensus 305 tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Lsk~YEIvIfTAs~~~YAd~ILd~LDP~ 382 (484)
++++||||||++.... +.|.. +-++...+.-.++|-|.-...-+..+++.++..
T Consensus 1 li~~DlDgTLl~~~~~-----------------------~~~~~-~~~~~~~~gi~~viaTGR~~~~v~~~~~~l~l~ 54 (236)
T TIGR02471 1 LIITDLDNTLLGDDEG-----------------------LASFV-ELLRGSGDAVGFGIATGRSVESAKSRYAKLNLP 54 (236)
T ss_pred CeEEeccccccCCHHH-----------------------HHHHH-HHHHhcCCCceEEEEeCCCHHHHHHHHHhCCCC
Confidence 3788999999974210 11212 444433355677777877777778787777643
No 190
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=61.42 E-value=4.1 Score=38.45 Aligned_cols=16 Identities=44% Similarity=0.551 Sum_probs=13.6
Q ss_pred ceEEEEeccccccccc
Q 011504 303 SVTLVLDLDETLVHST 318 (484)
Q Consensus 303 K~tLVLDLDeTLVhSs 318 (484)
-+.++||+||||+++.
T Consensus 6 ~~~iiFD~DGTL~d~~ 21 (226)
T PRK13222 6 IRAVAFDLDGTLVDSA 21 (226)
T ss_pred CcEEEEcCCcccccCH
Confidence 3489999999999874
No 191
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=59.69 E-value=16 Score=37.65 Aligned_cols=90 Identities=11% Similarity=0.123 Sum_probs=51.5
Q ss_pred CceEEEEecccccccccccccCCCCceEEEEeccccce-e-----eeeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHH
Q 011504 302 KSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHT-V-----YVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQ 374 (484)
Q Consensus 302 kK~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~-v-----~V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ 374 (484)
++-.+|||+|||++....... ...|... .++..... - -...=|++.+|++++. ..+.|++.|.-....-+.
T Consensus 100 ~~dA~V~DIDET~LsN~pY~~-~~~~g~e-~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~a 177 (275)
T TIGR01680 100 EKDTFLFNIDGTALSNIPYYK-KHGYGSE-KFDSELYDEEFVNKGEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAV 177 (275)
T ss_pred CCCEEEEECccccccCHHHHH-HhcCCCC-cCChhhhhHHHHhcccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHH
Confidence 457999999999996431110 0111000 00000000 0 1233589999999997 679999999988766666
Q ss_pred HHHHhCCCCCc-eeEEEeec
Q 011504 375 LLDILDPDGKL-ISRRVYRE 393 (484)
Q Consensus 375 ILd~LDP~~~l-fs~rL~Re 393 (484)
-++.|...|-. ..+.+.|.
T Consensus 178 T~~NL~kaGy~~~~~LiLR~ 197 (275)
T TIGR01680 178 TEANLKKAGYHTWEKLILKD 197 (275)
T ss_pred HHHHHHHcCCCCcceeeecC
Confidence 66666555511 23444564
No 192
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=58.85 E-value=4.6 Score=35.54 Aligned_cols=13 Identities=46% Similarity=0.828 Sum_probs=11.7
Q ss_pred EEEeccccccccc
Q 011504 306 LVLDLDETLVHST 318 (484)
Q Consensus 306 LVLDLDeTLVhSs 318 (484)
++||+||||+++.
T Consensus 1 iifD~dgtL~d~~ 13 (176)
T PF13419_consen 1 IIFDLDGTLVDTD 13 (176)
T ss_dssp EEEESBTTTEEHH
T ss_pred cEEECCCCcEeCH
Confidence 6899999999875
No 193
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=55.97 E-value=5.1 Score=36.24 Aligned_cols=13 Identities=38% Similarity=0.769 Sum_probs=11.9
Q ss_pred EEEeccccccccc
Q 011504 306 LVLDLDETLVHST 318 (484)
Q Consensus 306 LVLDLDeTLVhSs 318 (484)
++|||||||+.+.
T Consensus 2 vlFDlDgtLv~~~ 14 (183)
T TIGR01509 2 ILFDLDGVLVDTS 14 (183)
T ss_pred eeeccCCceechH
Confidence 7999999999985
No 194
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=55.70 E-value=11 Score=34.36 Aligned_cols=47 Identities=17% Similarity=0.260 Sum_probs=37.9
Q ss_pred eCchHH----HHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCC-CceeEEE
Q 011504 344 QRPHLK----TFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDG-KLISRRV 390 (484)
Q Consensus 344 lRPgL~----eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~LDP~~-~lfs~rL 390 (484)
++|++. +||+++. +.++++|-|++...+++++++.+.-.. ..+..++
T Consensus 86 ~~~~~~~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~ 138 (192)
T PF12710_consen 86 LFPGFIPDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNEL 138 (192)
T ss_dssp HCTTCHTTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEE
T ss_pred cCcCchhhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEee
Confidence 457777 9999985 789999999999999999999887654 2344455
No 195
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=53.46 E-value=36 Score=32.30 Aligned_cols=62 Identities=18% Similarity=0.215 Sum_probs=40.2
Q ss_pred EEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHh
Q 011504 306 LVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDIL 379 (484)
Q Consensus 306 LVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~L 379 (484)
+|.|+||||--|-... ..+ ...+.. +.|||+.++...++ +.|.++=-|+-.-..|...-+.|
T Consensus 2 VvsDIDGTiT~SD~~G-----~i~----~~~G~d---~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L 64 (157)
T PF08235_consen 2 VVSDIDGTITKSDVLG-----HIL----PILGKD---WTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWL 64 (157)
T ss_pred EEEeccCCcCccchhh-----hhh----hccCch---hhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHH
Confidence 6889999998773110 000 111111 67999999999999 56888777877655555544444
No 196
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=49.86 E-value=6.5 Score=42.41 Aligned_cols=16 Identities=31% Similarity=0.559 Sum_probs=14.0
Q ss_pred ceEEEEeccccccccc
Q 011504 303 SVTLVLDLDETLVHST 318 (484)
Q Consensus 303 K~tLVLDLDeTLVhSs 318 (484)
-..++|||||||+++.
T Consensus 241 ~k~vIFDlDGTLiDs~ 256 (459)
T PRK06698 241 LQALIFDMDGTLFQTD 256 (459)
T ss_pred hhheeEccCCceecch
Confidence 3589999999999986
No 197
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=49.83 E-value=7.7 Score=41.58 Aligned_cols=18 Identities=0% Similarity=0.172 Sum_probs=15.5
Q ss_pred CCceEEEEeccccccccc
Q 011504 301 RKSVTLVLDLDETLVHST 318 (484)
Q Consensus 301 ~kK~tLVLDLDeTLVhSs 318 (484)
.+-+.+|||||||||.+.
T Consensus 129 ~~~~~VIFDlDGTLIDS~ 146 (381)
T PLN02575 129 CGWLGAIFEWEGVIIEDN 146 (381)
T ss_pred CCCCEEEEcCcCcceeCH
Confidence 466789999999999875
No 198
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=45.36 E-value=37 Score=40.14 Aligned_cols=60 Identities=17% Similarity=0.114 Sum_probs=40.7
Q ss_pred CCCceEEEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhh--cceEEEEEcCCcHHHHHHHHH
Q 011504 300 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA--EMFEVVIFTASQSIYAAQLLD 377 (484)
Q Consensus 300 ~~kK~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Ls--k~YEIvIfTAs~~~YAd~ILd 377 (484)
..++..|+||+||||+..... -+..-|++.+-|+.|. +...++|-|.-...-.+.++.
T Consensus 593 ~~~~rlI~LDyDGTLlp~~~~--------------------~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~ 652 (854)
T PLN02205 593 RTTTRAILLDYDGTLMPQASI--------------------DKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFS 652 (854)
T ss_pred hhcCeEEEEecCCcccCCccc--------------------cCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhC
Confidence 345788999999999954210 0123468888888885 457777878777776666664
Q ss_pred Hh
Q 011504 378 IL 379 (484)
Q Consensus 378 ~L 379 (484)
.+
T Consensus 653 ~~ 654 (854)
T PLN02205 653 PC 654 (854)
T ss_pred CC
Confidence 44
No 199
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=44.97 E-value=61 Score=30.47 Aligned_cols=67 Identities=25% Similarity=0.332 Sum_probs=37.8
Q ss_pred eeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeecceeeeCCcccccccccCCCCCcEEEEEC
Q 011504 343 KQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDN 421 (484)
Q Consensus 343 ~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~LDP~~~lfs~rL~Re~C~~~~g~yiKDLs~LGrDlskVIIIDD 421 (484)
..|-.+.+||+.+. +.-.|++|-|+.+.- .+|..++...+++ ..+||+
T Consensus 52 ~~~~~l~~~L~~~~~~gk~I~~yGA~~kg~--tlln~~g~~~~~I-----------------------------~~vvD~ 100 (160)
T PF08484_consen 52 QSKAELREFLEKLKAEGKRIAGYGAGAKGN--TLLNYFGLDNDLI-----------------------------DYVVDD 100 (160)
T ss_dssp HHHHHHHHHHHHHHHTT--EEEE---SHHH--HHHHHHT--TTTS-------------------------------EEES
T ss_pred HHHHHHHHHHHHHHHcCCEEEEECcchHHH--HHHHHhCCCccee-----------------------------EEEEeC
Confidence 34666778888887 567799999998744 5677777765444 246787
Q ss_pred Cchhh-ccCCCceeeecccc
Q 011504 422 SPQVF-RLQVNNGIPIESWF 440 (484)
Q Consensus 422 sp~s~-~~qp~NgIpI~sw~ 440 (484)
+|... .+-|..+|||.+..
T Consensus 101 np~K~G~~~PGt~ipI~~p~ 120 (160)
T PF08484_consen 101 NPLKQGKYLPGTHIPIVSPE 120 (160)
T ss_dssp -GGGTTEE-TTT--EEEEGG
T ss_pred ChhhcCcccCCCCCeECCHH
Confidence 77766 44677778777754
No 200
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=44.56 E-value=12 Score=35.93 Aligned_cols=16 Identities=25% Similarity=0.515 Sum_probs=13.6
Q ss_pred ceEEEEeccccccccc
Q 011504 303 SVTLVLDLDETLVHST 318 (484)
Q Consensus 303 K~tLVLDLDeTLVhSs 318 (484)
++++++|+||||+.+.
T Consensus 3 ~~~vifDfDgTi~~~d 18 (219)
T PRK09552 3 SIQIFCDFDGTITNND 18 (219)
T ss_pred CcEEEEcCCCCCCcch
Confidence 4589999999999764
No 201
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=43.42 E-value=34 Score=33.23 Aligned_cols=50 Identities=22% Similarity=0.184 Sum_probs=29.3
Q ss_pred EEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhhcceE--EEEEcCCcHHHHHH
Q 011504 307 VLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFE--VVIFTASQSIYAAQ 374 (484)
Q Consensus 307 VLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Lsk~YE--IvIfTAs~~~YAd~ 374 (484)
.||.||||.--... .--...-|++.+.|+.|++... |+|-|.-...-.+.
T Consensus 1 ~lDyDGTL~p~~~~------------------p~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~ 52 (235)
T PF02358_consen 1 FLDYDGTLAPIVDD------------------PDAAVPPPELRELLRALAADPNNTVAIVSGRSLDDLER 52 (235)
T ss_dssp EEE-TTTSS---S-------------------GGG----HHHHHHHHHHHHHSE--EEEE-SS-HHHHHH
T ss_pred CcccCCccCCCCCC------------------ccccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHH
Confidence 58999999854322 1224567999999999998766 77777777666333
No 202
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=42.64 E-value=43 Score=39.19 Aligned_cols=64 Identities=17% Similarity=0.147 Sum_probs=44.9
Q ss_pred CCCceEEEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhhc--ceEEEEEcCCcHHHHHHHHH
Q 011504 300 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE--MFEVVIFTASQSIYAAQLLD 377 (484)
Q Consensus 300 ~~kK~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Lsk--~YEIvIfTAs~~~YAd~ILd 377 (484)
..++..|+||.||||+.....+ ....-+..-|++.+-|+.|++ .-.|+|-|--...-.++++.
T Consensus 504 ~a~~rll~LDyDGTL~~~~~~~---------------~~p~~a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~ 568 (797)
T PLN03063 504 KSNNRLLILGFYGTLTEPRNSQ---------------IKEMDLGLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFG 568 (797)
T ss_pred hccCeEEEEecCccccCCCCCc---------------cccccCCCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhC
Confidence 4456789999999998532111 011224456899999999985 47888889888877777775
Q ss_pred H
Q 011504 378 I 378 (484)
Q Consensus 378 ~ 378 (484)
.
T Consensus 569 ~ 569 (797)
T PLN03063 569 E 569 (797)
T ss_pred C
Confidence 4
No 203
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=42.05 E-value=29 Score=35.20 Aligned_cols=100 Identities=17% Similarity=0.231 Sum_probs=55.8
Q ss_pred eeeeCchHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHhCC---CCCceeEEEeec-cee---eeC---Cccccccccc
Q 011504 341 YVKQRPHLKTFLERVAEM-FEVVIFTASQSIYAAQLLDILDP---DGKLISRRVYRE-SCI---FSD---GTYTKDLTVL 409 (484)
Q Consensus 341 ~V~lRPgL~eFLe~Lsk~-YEIvIfTAs~~~YAd~ILd~LDP---~~~lfs~rL~Re-~C~---~~~---g~yiKDLs~L 409 (484)
.+.+|.|+.+|++.|.++ --+.||+||.-.-.+.+|+.-.. .=+.++..+.-+ .-. +.+ ..|.|+-..+
T Consensus 88 ~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv~VvSN~M~Fd~~g~l~gF~~~lIH~~NKn~~~l 167 (246)
T PF05822_consen 88 DIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNVKVVSNFMDFDEDGVLVGFKGPLIHTFNKNESAL 167 (246)
T ss_dssp ---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTEEEEEE-EEE-TTSBEEEE-SS---TT-HHHHHH
T ss_pred chhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCeEEEeeeEEECCcceEeecCCCceEEeeCCcccc
Confidence 488999999999999965 89999999999999999998632 223445554322 111 111 1234443333
Q ss_pred --------CCCCCcEEEEECCchhhcc-----CCCceeeecccc
Q 011504 410 --------GVDLAKVAIIDNSPQVFRL-----QVNNGIPIESWF 440 (484)
Q Consensus 410 --------GrDlskVIIIDDsp~s~~~-----qp~NgIpI~sw~ 440 (484)
-....+||++=|+..-..+ ..+|.|.|-=..
T Consensus 168 ~~~~~~~~~~~R~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn 211 (246)
T PF05822_consen 168 EDSPYFKQLKKRTNVLLLGDSLGDLHMADGVPDEENVLKIGFLN 211 (246)
T ss_dssp TTHHHHHCTTT--EEEEEESSSGGGGTTTT-S--SEEEEEEEE-
T ss_pred cCchHHHHhccCCcEEEecCccCChHhhcCCCccccEEEEEecc
Confidence 1356889999999864422 345666664433
No 204
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=41.72 E-value=16 Score=34.46 Aligned_cols=16 Identities=31% Similarity=0.463 Sum_probs=13.8
Q ss_pred ceEEEEeccccccccc
Q 011504 303 SVTLVLDLDETLVHST 318 (484)
Q Consensus 303 K~tLVLDLDeTLVhSs 318 (484)
.+.++||+||||++..
T Consensus 4 ~k~i~FD~d~TL~d~~ 19 (229)
T COG1011 4 IKAILFDLDGTLLDFD 19 (229)
T ss_pred eeEEEEecCCcccccc
Confidence 4689999999999974
No 205
>PLN02382 probable sucrose-phosphatase
Probab=41.69 E-value=67 Score=34.62 Aligned_cols=17 Identities=35% Similarity=0.530 Sum_probs=14.3
Q ss_pred CCceEEEEecccccccc
Q 011504 301 RKSVTLVLDLDETLVHS 317 (484)
Q Consensus 301 ~kK~tLVLDLDeTLVhS 317 (484)
.+++.|+.||||||+..
T Consensus 7 ~~~~lI~sDLDGTLL~~ 23 (413)
T PLN02382 7 SPRLMIVSDLDHTMVDH 23 (413)
T ss_pred CCCEEEEEcCCCcCcCC
Confidence 45789999999999964
No 206
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=41.30 E-value=14 Score=35.72 Aligned_cols=16 Identities=31% Similarity=0.436 Sum_probs=13.7
Q ss_pred ceEEEEeccccccccc
Q 011504 303 SVTLVLDLDETLVHST 318 (484)
Q Consensus 303 K~tLVLDLDeTLVhSs 318 (484)
++..+||+||||++.-
T Consensus 5 ~~la~FDfDgTLt~~d 20 (210)
T TIGR01545 5 KRIIFFDLDGTLHQQD 20 (210)
T ss_pred CcEEEEcCCCCCccCc
Confidence 5678999999999874
No 207
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=40.68 E-value=15 Score=34.50 Aligned_cols=14 Identities=21% Similarity=0.437 Sum_probs=12.4
Q ss_pred EEEEeccccccccc
Q 011504 305 TLVLDLDETLVHST 318 (484)
Q Consensus 305 tLVLDLDeTLVhSs 318 (484)
++||||||||++..
T Consensus 2 ~viFDldgvL~d~~ 15 (199)
T PRK09456 2 LYIFDLGNVIVDID 15 (199)
T ss_pred EEEEeCCCccccCc
Confidence 68999999999874
No 208
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=39.22 E-value=47 Score=36.04 Aligned_cols=58 Identities=16% Similarity=0.141 Sum_probs=37.5
Q ss_pred CCceEEEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhhcceEEEEEcCCc
Q 011504 301 RKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQ 368 (484)
Q Consensus 301 ~kK~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Lsk~YEIvIfTAs~ 368 (484)
...+...||+|+|||...... .+......|.+..++....+=+.=.+.|-++|||...
T Consensus 73 ~~~K~i~FD~dgtlI~t~sg~----------vf~~~~~dw~~l~~~vp~Klktl~~~g~~l~iftnq~ 130 (422)
T KOG2134|consen 73 GGSKIIMFDYDGTLIDTKSGK----------VFPKGSMDWRILFPEVPSKLKTLYQDGIKLFIFTNQN 130 (422)
T ss_pred CCcceEEEecCCceeecCCcc----------eeeccCccceeeccccchhhhhhccCCeEEEEEeccc
Confidence 445688999999999875321 1222334455555666665444444789999999765
No 209
>TIGR02826 RNR_activ_nrdG3 anaerobic ribonucleoside-triphosphate reductase activating protein. Members of this family represent a set of proteins related to, yet architecturally different from, the activating protein for the glycine radical-containing, oxygen-sensitive ribonucleoside-triphosphate reductase (RNR) as described in model TIGR02491. Members of this family are found paired with members of a similarly divergent set of anaerobic ribonucleoside-triphosphate reductases. Identification of this protein as an RNR activitating protein is partly from pairing with a candidate RNR. It is further supported by our finding that upstream of these operons are examples of a conserved regulatory element (described Rodionov and Gelfand) that is found in nearly all bacteria and that occurs specifically upstream of operons for all three classes of RNR genes.
Probab=38.16 E-value=75 Score=29.45 Aligned_cols=71 Identities=23% Similarity=0.277 Sum_probs=46.8
Q ss_pred EEeccccceeeeeeCchHHHHHHHhhc-ceEEEEEcCCcHH-HHHHHHHHhCCCCCceeEEEeecceeeeCCcccccccc
Q 011504 331 VFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQSI-YAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTV 408 (484)
Q Consensus 331 v~~~~~~~~v~V~lRPgL~eFLe~Lsk-~YEIvIfTAs~~~-YAd~ILd~LDP~~~lfs~rL~Re~C~~~~g~yiKDLs~ 408 (484)
+.+.+++ ..++.+.++++.+.+ .+.+.|+|.+... --+.++..+|. ...|.|+++|..
T Consensus 65 Vt~SGGE-----l~~~~l~~ll~~lk~~Gl~i~l~Tg~~~~~~~~~il~~iD~---------------l~~g~y~~~~~~ 124 (147)
T TIGR02826 65 VLFLGGE-----WNREALLSLLKIFKEKGLKTCLYTGLEPKDIPLELVQHLDY---------------LKTGRWIHTRGG 124 (147)
T ss_pred EEEechh-----cCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHhCCE---------------EEEChHHHHcCC
Confidence 4555555 367899999999985 5899999986542 22344444432 246667766666
Q ss_pred cCCCCCcEEEEEC
Q 011504 409 LGVDLAKVAIIDN 421 (484)
Q Consensus 409 LGrDlskVIIIDD 421 (484)
+++.-+|=+|+|-
T Consensus 125 ~~~~~sNQ~~~~~ 137 (147)
T TIGR02826 125 LGSPTTNQIFIDL 137 (147)
T ss_pred CCCCCcCceEEEC
Confidence 6555567777774
No 210
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=33.01 E-value=83 Score=37.76 Aligned_cols=71 Identities=15% Similarity=0.185 Sum_probs=47.8
Q ss_pred CCCceEEEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhhc--ceEEEEEcCCcHHHHHHHHH
Q 011504 300 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE--MFEVVIFTASQSIYAAQLLD 377 (484)
Q Consensus 300 ~~kK~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Lsk--~YEIvIfTAs~~~YAd~ILd 377 (484)
..++..|+||.||||+--...+...... -....+..-|.+.+.|+.|.+ ...|+|-|--...-.+.++.
T Consensus 588 ~a~~RLlfLDyDGTLap~~~~P~~~~~~---------~~~~~a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg 658 (934)
T PLN03064 588 QSNNRLLILGFNATLTEPVDTPGRRGDQ---------IKEMELRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFG 658 (934)
T ss_pred hccceEEEEecCceeccCCCCccccccc---------ccccccCCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhC
Confidence 4467789999999998643222100000 001124455889999999995 47899999998888888776
Q ss_pred Hh
Q 011504 378 IL 379 (484)
Q Consensus 378 ~L 379 (484)
.+
T Consensus 659 ~~ 660 (934)
T PLN03064 659 EF 660 (934)
T ss_pred CC
Confidence 55
No 211
>PRK10671 copA copper exporting ATPase; Provisional
Probab=31.34 E-value=43 Score=39.14 Aligned_cols=85 Identities=14% Similarity=0.150 Sum_probs=59.4
Q ss_pred eeCchHHHHHHHhh-cceEEEEEcCCcHHHHHHHHHHhCCCCCceeEEEeecceeeeCCcccccccccCCCCCcEEEEEC
Q 011504 343 KQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDN 421 (484)
Q Consensus 343 ~lRPgL~eFLe~Ls-k~YEIvIfTAs~~~YAd~ILd~LDP~~~lfs~rL~Re~C~~~~g~yiKDLs~LGrDlskVIIIDD 421 (484)
..||++.+.|+++. +.+.+++.|...+..|+.+++.++-.. +|.... +....+-++.++...++++.|-|
T Consensus 650 ~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~-~~~~~~--------p~~K~~~i~~l~~~~~~v~~vGD 720 (834)
T PRK10671 650 PLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDE-VIAGVL--------PDGKAEAIKRLQSQGRQVAMVGD 720 (834)
T ss_pred cchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCE-EEeCCC--------HHHHHHHHHHHhhcCCEEEEEeC
Confidence 56999999999998 569999999999999999999998753 332111 11122334445556678999999
Q ss_pred CchhhccCCCceeee
Q 011504 422 SPQVFRLQVNNGIPI 436 (484)
Q Consensus 422 sp~s~~~qp~NgIpI 436 (484)
...-...-...++-|
T Consensus 721 g~nD~~al~~Agvgi 735 (834)
T PRK10671 721 GINDAPALAQADVGI 735 (834)
T ss_pred CHHHHHHHHhCCeeE
Confidence 886554433444433
No 212
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=30.40 E-value=95 Score=34.14 Aligned_cols=53 Identities=23% Similarity=0.392 Sum_probs=40.4
Q ss_pred eeeeeeCchHHHHHHHhhcc-eEEEEEcCCcHHHHHHHHHHh-CC-------CCCceeEEEe
Q 011504 339 TVYVKQRPHLKTFLERVAEM-FEVVIFTASQSIYAAQLLDIL-DP-------DGKLISRRVY 391 (484)
Q Consensus 339 ~v~V~lRPgL~eFLe~Lsk~-YEIvIfTAs~~~YAd~ILd~L-DP-------~~~lfs~rL~ 391 (484)
.-||.+-|.+..+|+.+.+. -.+.+-|+|...|++.+++.+ ++ |+.+|+-++.
T Consensus 179 ~kYi~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv 240 (448)
T PF05761_consen 179 EKYIHKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIV 240 (448)
T ss_dssp CCCEE--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEE
T ss_pred HHHccCCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEE
Confidence 34788899999999999966 489999999999999999986 44 6678877665
No 213
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=29.81 E-value=25 Score=31.79 Aligned_cols=13 Identities=31% Similarity=0.560 Sum_probs=11.0
Q ss_pred EEEeccccccccc
Q 011504 306 LVLDLDETLVHST 318 (484)
Q Consensus 306 LVLDLDeTLVhSs 318 (484)
+|+|+||||+...
T Consensus 2 ~~fD~DgTl~~~~ 14 (177)
T TIGR01488 2 AIFDFDGTLTRQD 14 (177)
T ss_pred EEecCccccccch
Confidence 6899999999753
No 214
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=29.81 E-value=29 Score=31.64 Aligned_cols=13 Identities=38% Similarity=0.682 Sum_probs=11.3
Q ss_pred EEEeccccccccc
Q 011504 306 LVLDLDETLVHST 318 (484)
Q Consensus 306 LVLDLDeTLVhSs 318 (484)
+++|+||||+...
T Consensus 1 v~fD~DGTL~~~~ 13 (192)
T PF12710_consen 1 VIFDFDGTLTDSD 13 (192)
T ss_dssp EEEESBTTTBSSH
T ss_pred eEEecCcCeecCC
Confidence 5899999999775
No 215
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=28.55 E-value=46 Score=36.99 Aligned_cols=23 Identities=30% Similarity=0.382 Sum_probs=19.2
Q ss_pred EEEEEcCCcHHHHHHHHHH-hCCC
Q 011504 360 EVVIFTASQSIYAAQLLDI-LDPD 382 (484)
Q Consensus 360 EIvIfTAs~~~YAd~ILd~-LDP~ 382 (484)
+.+|-||+.+.|++++++. |+-+
T Consensus 124 ~~vvVSASp~~~Vepfa~~~LGid 147 (497)
T PLN02177 124 KRYIITASPRIMVEPFVKTFLGAD 147 (497)
T ss_pred CEEEEECCcHHHHHHHHHHcCCCC
Confidence 4599999999999999976 6554
No 216
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=27.63 E-value=30 Score=32.21 Aligned_cols=13 Identities=31% Similarity=0.445 Sum_probs=11.1
Q ss_pred EEEeccccccccc
Q 011504 306 LVLDLDETLVHST 318 (484)
Q Consensus 306 LVLDLDeTLVhSs 318 (484)
.+||+||||+...
T Consensus 2 a~FD~DgTL~~~~ 14 (202)
T TIGR01490 2 AFFDFDGTLTAKD 14 (202)
T ss_pred eEEccCCCCCCCc
Confidence 6899999999853
No 217
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=26.75 E-value=36 Score=41.12 Aligned_cols=18 Identities=28% Similarity=0.466 Sum_probs=15.2
Q ss_pred CCceEEEEeccccccccc
Q 011504 301 RKSVTLVLDLDETLVHST 318 (484)
Q Consensus 301 ~kK~tLVLDLDeTLVhSs 318 (484)
.+-+.++|||||||+++.
T Consensus 73 ~~ikaVIFDlDGTLiDS~ 90 (1057)
T PLN02919 73 GKVSAVLFDMDGVLCNSE 90 (1057)
T ss_pred CCCCEEEECCCCCeEeCh
Confidence 345689999999999986
No 218
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=25.30 E-value=67 Score=33.92 Aligned_cols=40 Identities=18% Similarity=0.287 Sum_probs=31.5
Q ss_pred eeeeeCc-hHHHHHHHhhc------ceEEEEEcCCcHHHHHHHHHHh
Q 011504 340 VYVKQRP-HLKTFLERVAE------MFEVVIFTASQSIYAAQLLDIL 379 (484)
Q Consensus 340 v~V~lRP-gL~eFLe~Lsk------~YEIvIfTAs~~~YAd~ILd~L 379 (484)
+.++.|| ++..-|+.|.+ .++|+|+--|...-+..+++..
T Consensus 6 v~ayNRp~~l~r~LesLl~~~p~~~~~~liIs~DG~~~~~~~~v~~~ 52 (334)
T cd02514 6 VIACNRPDYLRRMLDSLLSYRPSAEKFPIIVSQDGGYEEVADVAKSF 52 (334)
T ss_pred EEecCCHHHHHHHHHHHHhccccCCCceEEEEeCCCchHHHHHHHhh
Confidence 4578899 79999999984 5899999988877666666554
No 219
>cd06537 CIDE_N_B CIDE_N domain of CIDE-B proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45 and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=22.33 E-value=1.3e+02 Score=25.74 Aligned_cols=16 Identities=50% Similarity=0.536 Sum_probs=13.7
Q ss_pred ceEEEEeccccccccc
Q 011504 303 SVTLVLDLDETLVHST 318 (484)
Q Consensus 303 K~tLVLDLDeTLVhSs 318 (484)
..+|||+=|||.|.+.
T Consensus 39 ~~~lvLeeDGT~Vd~E 54 (81)
T cd06537 39 VLTLVLEEDGTAVDSE 54 (81)
T ss_pred ceEEEEecCCCEEccH
Confidence 3799999999999763
No 220
>cd06539 CIDE_N_A CIDE_N domain of CIDE-A proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45, and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, the CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=21.06 E-value=1.4e+02 Score=25.30 Aligned_cols=15 Identities=53% Similarity=0.636 Sum_probs=13.4
Q ss_pred ceEEEEecccccccc
Q 011504 303 SVTLVLDLDETLVHS 317 (484)
Q Consensus 303 K~tLVLDLDeTLVhS 317 (484)
..+|||+=|||.|.+
T Consensus 40 ~~~lvL~eDGT~Vd~ 54 (78)
T cd06539 40 LVTLVLEEDGTVVDT 54 (78)
T ss_pred CcEEEEeCCCCEEcc
Confidence 469999999999976
No 221
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=20.83 E-value=1.4e+02 Score=29.94 Aligned_cols=58 Identities=19% Similarity=0.277 Sum_probs=37.0
Q ss_pred CCCceEEEEecccccccccccccCCCCceEEEEeccccceeeeeeCchHHHHHHHhhcceEEEE-EcCCcHHHHH----H
Q 011504 300 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVI-FTASQSIYAA----Q 374 (484)
Q Consensus 300 ~~kK~tLVLDLDeTLVhSs~~~~~~~Df~~~v~~~~~~~~v~V~lRPgL~eFLe~Lsk~YEIvI-fTAs~~~YAd----~ 374 (484)
+.++.++.+|.||||.-.. -..-|-+.+||+.+.+...|.+ .-+-.....+ .
T Consensus 8 r~~~~l~lfdvdgtLt~~r-----------------------~~~~~e~~~~l~~lr~~v~ig~VggsDl~k~~eqlG~~ 64 (252)
T KOG3189|consen 8 RDEETLCLFDVDGTLTPPR-----------------------QKVTPEMLEFLQKLRKKVTIGFVGGSDLSKQQEQLGDN 64 (252)
T ss_pred cCCceEEEEecCCcccccc-----------------------ccCCHHHHHHHHHHhhheEEEEeecHHHHHHHHHhchh
Confidence 3445667779999996442 2346889999999998877764 3333333333 3
Q ss_pred HHHHhC
Q 011504 375 LLDILD 380 (484)
Q Consensus 375 ILd~LD 380 (484)
|++..|
T Consensus 65 Vl~~fD 70 (252)
T KOG3189|consen 65 VLEEFD 70 (252)
T ss_pred HHhhhc
Confidence 454444
Done!