Citrus Sinensis ID: 011507

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480----

MVKKSKKSKSKRVPLRKKYKIIKKVKEHHKKKAKEAKKLNLSGKRKVEKDPGIPNDWPFKEQELKALEARRARALKELEQKKAARKERAQKRKLGLLEDDDVSMLADAANGKEENFGEGTSTASGKNRDNSDRAFYKELVKVIEVSDVILEVLDARDPLGTRCIDMEKMVMKAGPDKHLVLLLNKIDLVPRESVEKWLKYLREELPAVAFKCSTQEQRANLGWKSSKTAKPSNILQTSDCLGAETLIKLLKNYSRSHEIKKSITVGVIGLPNVGKSSLINSLKRCHVANVGATPGLTRSMQEVQLDKNVKLLDCPGVVMLKSGENDASIALRNCKRIEKLDDPVGPVKEILNRCPANLLISLYKLPSFDSVDDFLQKVATVRGKLKKGGIVDVEAAARIILHDWNEGKIPYYTMPPARDQGIPSEARIVSELGKEFNVNEVYKNESSFIGSLKSVDDFQPVEVLPCCPLNFDEAMLEVCNVYIA

cccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHcccccEEEEEECcccccccccHHHHHHHHHccccccEEEEEEccccccHHHHHHHHHHHHHcccEEEEEccccHHHccccccccccccccccccccccccHHHHHHHHHHHHHcccccccEEEEEEccccccHHHHHHHcccccccccccccccccEEEEEEEcccEEEEcccccccccccccHHHHHHHccccccccccccHHHHHHHHcccHHHHHHHccccccccHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHcccHHHHHcccHHHHHcccccccccccccccccccccHHHHHHccccccc

*************************************************************************************************************************************AFYKELVKVIEVSDVILEVLDARDPLGTRCIDMEKMVMKAGPDKHLVLLLNKIDLVPRESVEKWLKYLREELPAVAFKCST*******************ILQTSDCLGAETLIKLLKNYSRSHEIKKSITVGVIGLPNVGKSSLINSLKRCHVANVGATPGLTRSMQEVQLDKNVKLLDCPGVVMLKSGENDASIALRNCKRIEKLDDPVGPVKEILNRCPANLLISLYKLPSFDSVDDFLQKVATVRGKLKKGGIVDVEAAARIILHDWNEGKIPYYTMPPA********ARIVSELGKEFNVNEVYKNESSFIGSLKSVDDFQPVEVLPCCPLNFDEAMLEVCNVYI*

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MVKKSKKSKSKRVPLRKKYKIIKKVKEHHKKKAKEAKKLNLSGKRKVEKDPGIPNDWPFKEQExxxxxxxxxxxxxxxxxxxxxRKERAQKRKLGLLEDDDVSMLADAANGKEENFGEGTSTASGKNRDNSDRAFYKELVKVIEVSDVILEVLDARDPLGTRCIDMEKMVMKAGPDKHLVLLLNKIDLVPRESVEKWLKYLREELPAVAFKCSTQEQRANLGWKSSKTAKPSNILQTSDCLGAETLIKLLKNYSRSHEIKKSITVGVIGLPNVGKSSLINSLKRCHVANVGATPGLTRSMQEVQLDKNVKLLDCPGVVMLKSGENDASIALRNCKRIEKLDDPVGPVKEILNRCPANLLISLYKLPSFDSVDDFLQKVATVRGKLKKGGIVDVEAAARIILHDWNEGKIPYYTMPPARDQGIPSEARIVSELGKEFNVNEVYKNESSFIGSLKSVDDFQPVEVLPCCPLNFDEAMLEVCNVYIA

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
GTPase grn1	Required for optimal growth. Required for normal processing of ribosomal pre-rRNA. Required for nuclear export of ribosomal protein rpl2501.	probable	O74791

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1PUJ, chain A
Confidence level:very confident
Coverage over the Query: 134-211,237-288,301-416
View the alignment between query and template
View the model in PyMOL

Template: 3IEV, chain A
Confidence level:confident
Coverage over the Query: 261-345,368-376,399-481
View the alignment between query and template
View the model in PyMOL

Template: 2FV8, chain A
Confidence level:probable
Coverage over the Query: 141-255
View the alignment between query and template
View the model in PyMOL