Query 011508
Match_columns 484
No_of_seqs 633 out of 4548
Neff 10.1
Searched_HMMs 46136
Date Fri Mar 29 02:08:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011508.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011508hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 4E-55 8.7E-60 481.4 32.4 416 1-470 530-955 (968)
2 KOG1187 Serine/threonine prote 100.0 5.1E-55 1.1E-59 420.0 26.2 289 145-468 61-354 (361)
3 KOG0192 Tyrosine kinase specif 100.0 1.2E-49 2.6E-54 379.8 22.5 260 162-472 44-309 (362)
4 KOG0581 Mitogen-activated prot 100.0 8.4E-50 1.8E-54 362.3 19.8 251 162-462 82-335 (364)
5 KOG0197 Tyrosine kinases [Sign 100.0 6.8E-49 1.5E-53 372.8 15.9 256 161-469 208-464 (468)
6 KOG0575 Polo-like serine/threo 100.0 3.1E-48 6.7E-53 372.1 18.5 249 159-462 18-269 (592)
7 KOG0591 NIMA (never in mitosis 100.0 1.2E-49 2.6E-54 346.4 7.8 256 160-460 20-279 (375)
8 KOG0595 Serine/threonine-prote 100.0 3E-48 6.5E-53 355.1 15.6 202 157-380 8-217 (429)
9 KOG0615 Serine/threonine prote 100.0 3.6E-48 7.8E-53 354.1 15.0 254 158-462 171-437 (475)
10 KOG1026 Nerve growth factor re 100.0 2.1E-46 4.5E-51 373.1 15.5 264 160-469 487-765 (774)
11 KOG0593 Predicted protein kina 100.0 8.9E-46 1.9E-50 325.5 14.8 277 159-461 2-283 (396)
12 KOG0598 Ribosomal protein S6 k 100.0 1.4E-45 3.1E-50 334.7 15.3 244 157-454 23-269 (357)
13 KOG0592 3-phosphoinositide-dep 100.0 1.5E-45 3.3E-50 347.8 15.5 260 155-462 69-338 (604)
14 KOG0198 MEKK and related serin 100.0 4.9E-45 1.1E-49 337.4 16.6 261 159-465 17-279 (313)
15 KOG0582 Ste20-like serine/thre 100.0 2.3E-44 5.1E-49 332.3 17.4 267 157-462 24-293 (516)
16 cd05102 PTKc_VEGFR3 Catalytic 100.0 4E-44 8.6E-49 348.5 19.8 268 157-468 5-336 (338)
17 KOG0193 Serine/threonine prote 100.0 5.6E-45 1.2E-49 348.1 13.4 270 150-470 383-657 (678)
18 KOG0600 Cdc2-related protein k 100.0 2.2E-44 4.8E-49 337.3 17.0 280 159-461 117-399 (560)
19 KOG0661 MAPK related serine/th 100.0 2E-45 4.4E-50 341.8 9.4 269 158-462 9-291 (538)
20 KOG2345 Serine/threonine prote 100.0 1.4E-44 3.1E-49 309.5 13.1 278 156-466 18-300 (302)
21 KOG0578 p21-activated serine/t 100.0 2.7E-44 5.8E-49 342.3 15.1 251 159-462 273-523 (550)
22 KOG0659 Cdk activating kinase 100.0 1E-43 2.2E-48 307.3 17.0 277 159-462 2-281 (318)
23 KOG4721 Serine/threonine prote 100.0 2.1E-44 4.5E-49 340.7 12.3 256 146-471 118-373 (904)
24 KOG1095 Protein tyrosine kinas 100.0 8.8E-44 1.9E-48 366.9 17.2 280 158-483 691-979 (1025)
25 KOG0583 Serine/threonine prote 100.0 4.8E-43 1E-47 337.7 19.9 257 156-468 14-280 (370)
26 KOG0658 Glycogen synthase kina 100.0 1.2E-43 2.6E-48 321.4 12.8 287 160-469 25-315 (364)
27 KOG0196 Tyrosine kinase, EPH ( 100.0 3.3E-44 7.2E-49 350.8 7.5 261 160-468 630-893 (996)
28 KOG0597 Serine-threonine prote 100.0 4.6E-43 9.9E-48 331.6 14.6 248 159-462 2-251 (808)
29 KOG0660 Mitogen-activated prot 100.0 2.6E-43 5.5E-48 318.7 11.3 287 154-462 17-310 (359)
30 PHA02988 hypothetical protein; 100.0 1.1E-41 2.3E-46 322.4 22.9 251 165-468 26-281 (283)
31 KOG0588 Serine/threonine prote 100.0 1.1E-42 2.3E-47 335.4 15.7 250 158-463 11-264 (786)
32 KOG0194 Protein tyrosine kinas 100.0 1.6E-42 3.4E-47 334.9 16.8 269 152-471 150-425 (474)
33 cd05096 PTKc_DDR1 Catalytic do 100.0 6.8E-42 1.5E-46 327.8 20.5 267 159-464 5-303 (304)
34 KOG0201 Serine/threonine prote 100.0 1.6E-43 3.4E-48 326.6 8.6 251 158-462 12-263 (467)
35 cd05104 PTKc_Kit Catalytic dom 100.0 7.5E-42 1.6E-46 336.1 20.6 262 159-465 35-373 (375)
36 KOG0663 Protein kinase PITSLRE 100.0 4E-42 8.6E-47 306.4 16.4 279 159-462 76-361 (419)
37 KOG1989 ARK protein kinase fam 100.0 1.6E-42 3.4E-47 347.0 15.0 272 157-469 35-314 (738)
38 KOG0585 Ca2+/calmodulin-depend 100.0 6.3E-42 1.4E-46 318.2 17.6 261 157-464 95-374 (576)
39 cd05106 PTKc_CSF-1R Catalytic 100.0 1.3E-41 2.8E-46 334.1 20.2 264 158-466 37-372 (374)
40 KOG0616 cAMP-dependent protein 100.0 2.8E-42 6E-47 302.8 13.1 198 159-380 44-244 (355)
41 KOG0605 NDR and related serine 100.0 5.7E-42 1.2E-46 323.9 15.9 211 156-380 138-391 (550)
42 cd05631 STKc_GRK4 Catalytic do 100.0 3.9E-41 8.4E-46 319.3 20.8 253 160-462 1-261 (285)
43 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 6.6E-41 1.4E-45 317.6 21.7 272 162-467 7-282 (283)
44 cd05612 STKc_PRKX_like Catalyt 100.0 1E-41 2.2E-46 324.3 15.9 246 159-462 1-254 (291)
45 KOG0611 Predicted serine/threo 100.0 4.5E-42 9.8E-47 312.9 12.4 248 159-463 53-304 (668)
46 cd05064 PTKc_EphR_A10 Catalyti 100.0 6.6E-41 1.4E-45 314.6 20.1 258 159-466 5-265 (266)
47 PF07714 Pkinase_Tyr: Protein 100.0 1.6E-41 3.5E-46 317.3 15.7 253 163-463 3-259 (259)
48 KOG0580 Serine/threonine prote 100.0 4.9E-42 1.1E-46 292.7 10.9 250 159-463 22-274 (281)
49 cd05571 STKc_PKB Catalytic dom 100.0 3.1E-41 6.7E-46 325.6 18.0 242 165-461 1-250 (323)
50 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 3.5E-41 7.6E-46 326.9 18.4 254 159-462 1-257 (333)
51 cd07859 STKc_TDY_MAPK_plant Ca 100.0 3.5E-41 7.5E-46 328.0 18.4 279 160-462 1-290 (338)
52 PTZ00263 protein kinase A cata 100.0 2.4E-41 5.2E-46 327.2 17.0 246 159-462 18-271 (329)
53 cd06649 PKc_MEK2 Catalytic dom 100.0 1.4E-40 3E-45 322.2 22.1 200 158-379 4-204 (331)
54 cd05054 PTKc_VEGFR Catalytic d 100.0 7.5E-41 1.6E-45 324.3 20.0 267 158-468 6-335 (337)
55 cd05093 PTKc_TrkB Catalytic do 100.0 2.5E-40 5.4E-45 314.4 23.1 265 159-469 5-282 (288)
56 cd07848 STKc_CDKL5 Catalytic d 100.0 5.8E-41 1.3E-45 318.7 18.7 277 159-461 1-283 (287)
57 cd08228 STKc_Nek6 Catalytic do 100.0 1.3E-40 2.9E-45 312.8 20.8 262 159-467 2-266 (267)
58 KOG0694 Serine/threonine prote 100.0 1.5E-41 3.2E-46 329.9 14.6 244 157-456 366-613 (694)
59 cd05105 PTKc_PDGFR_alpha Catal 100.0 1E-40 2.2E-45 328.9 20.7 266 157-467 35-398 (400)
60 cd05048 PTKc_Ror Catalytic Dom 100.0 1.3E-40 2.8E-45 315.7 20.5 261 159-465 5-282 (283)
61 cd07862 STKc_CDK6 Catalytic do 100.0 2.2E-40 4.8E-45 315.2 22.1 275 159-461 1-286 (290)
62 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 1E-40 2.2E-45 316.6 19.6 273 159-466 4-283 (284)
63 cd05049 PTKc_Trk Catalytic dom 100.0 1.4E-40 3E-45 315.0 20.2 260 159-464 5-279 (280)
64 cd05585 STKc_YPK1_like Catalyt 100.0 6.2E-41 1.3E-45 322.1 18.0 240 167-461 1-246 (312)
65 KOG4257 Focal adhesion tyrosin 100.0 2.3E-41 5.1E-46 323.1 14.7 260 158-468 388-651 (974)
66 KOG0589 Serine/threonine prote 100.0 3.1E-41 6.7E-46 319.7 15.4 253 159-462 4-258 (426)
67 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1.4E-40 3E-45 316.0 20.1 275 159-461 5-284 (288)
68 PTZ00267 NIMA-related protein 100.0 5.3E-41 1.1E-45 339.8 18.0 255 160-461 68-322 (478)
69 cd05108 PTKc_EGFR Catalytic do 100.0 1.1E-40 2.4E-45 321.1 18.9 262 159-470 7-272 (316)
70 cd07869 STKc_PFTAIRE1 Catalyti 100.0 8.7E-41 1.9E-45 319.9 18.0 279 157-461 3-287 (303)
71 cd05033 PTKc_EphR Catalytic do 100.0 2.6E-40 5.7E-45 310.6 20.6 259 159-466 4-265 (266)
72 cd05595 STKc_PKB_beta Catalyti 100.0 1.1E-40 2.4E-45 321.7 18.4 243 165-462 1-251 (323)
73 cd05035 PTKc_Axl_like Catalyti 100.0 3.9E-40 8.5E-45 310.6 21.8 265 161-466 1-272 (273)
74 cd05593 STKc_PKB_gamma Catalyt 100.0 1.5E-40 3.2E-45 321.4 19.0 243 165-462 1-251 (328)
75 cd05094 PTKc_TrkC Catalytic do 100.0 5.8E-40 1.3E-44 312.4 22.8 265 159-469 5-285 (291)
76 cd05052 PTKc_Abl Catalytic dom 100.0 2.6E-40 5.7E-45 310.1 19.9 256 159-466 6-262 (263)
77 PTZ00283 serine/threonine prot 100.0 1.7E-40 3.6E-45 336.2 19.8 265 155-462 28-297 (496)
78 cd05072 PTKc_Lyn Catalytic dom 100.0 2.7E-40 5.8E-45 309.7 19.8 255 158-465 5-260 (261)
79 cd05075 PTKc_Axl Catalytic dom 100.0 3.1E-40 6.8E-45 311.1 20.4 265 161-466 1-271 (272)
80 PTZ00426 cAMP-dependent protei 100.0 1.1E-40 2.3E-45 323.3 17.6 247 159-462 30-284 (340)
81 cd05089 PTKc_Tie1 Catalytic do 100.0 3.8E-40 8.3E-45 314.5 21.1 265 159-472 2-281 (297)
82 cd08229 STKc_Nek7 Catalytic do 100.0 3.4E-40 7.4E-45 310.0 20.0 261 159-466 2-265 (267)
83 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 6.5E-40 1.4E-44 308.1 21.8 262 159-467 2-266 (267)
84 cd05114 PTKc_Tec_Rlk Catalytic 100.0 4.8E-40 1E-44 307.0 20.8 251 159-463 4-255 (256)
85 PLN00034 mitogen-activated pro 100.0 2.5E-40 5.5E-45 323.3 19.5 249 159-462 74-328 (353)
86 cd05116 PTKc_Syk Catalytic dom 100.0 5.4E-40 1.2E-44 306.8 20.8 251 166-466 2-255 (257)
87 KOG4278 Protein tyrosine kinas 100.0 3.7E-41 8.1E-46 321.4 12.8 263 152-466 260-523 (1157)
88 cd06650 PKc_MEK1 Catalytic dom 100.0 5.4E-40 1.2E-44 318.1 21.2 200 158-379 4-204 (333)
89 cd05111 PTK_HER3 Pseudokinase 100.0 8.9E-40 1.9E-44 309.1 21.7 260 159-468 7-270 (279)
90 cd05062 PTKc_IGF-1R Catalytic 100.0 6.8E-40 1.5E-44 309.7 20.8 262 157-464 4-276 (277)
91 KOG0594 Protein kinase PCTAIRE 100.0 3.9E-40 8.4E-45 299.3 18.2 281 159-462 11-302 (323)
92 cd05599 STKc_NDR_like Catalyti 100.0 3.2E-40 7E-45 324.3 18.9 259 159-462 1-296 (364)
93 KOG3653 Transforming growth fa 100.0 1.3E-40 2.7E-45 309.6 14.9 280 159-470 210-507 (534)
94 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.6E-40 3.4E-45 311.2 15.8 257 157-466 4-261 (261)
95 cd05053 PTKc_FGFR Catalytic do 100.0 4.7E-40 1E-44 313.4 19.3 266 156-467 9-292 (293)
96 cd05088 PTKc_Tie2 Catalytic do 100.0 9.8E-40 2.1E-44 312.5 21.6 263 159-470 7-284 (303)
97 PHA03212 serine/threonine kina 100.0 4.4E-40 9.5E-45 324.3 19.1 195 158-379 91-285 (391)
98 cd05068 PTKc_Frk_like Catalyti 100.0 8.3E-40 1.8E-44 306.3 20.1 255 158-465 5-260 (261)
99 cd05115 PTKc_Zap-70 Catalytic 100.0 1.5E-39 3.2E-44 303.8 21.7 252 166-466 2-255 (257)
100 cd05045 PTKc_RET Catalytic dom 100.0 9.9E-40 2.1E-44 310.7 20.7 263 160-468 1-288 (290)
101 cd05608 STKc_GRK1 Catalytic do 100.0 7.8E-40 1.7E-44 309.6 19.8 249 167-462 1-257 (280)
102 cd05043 PTK_Ryk Pseudokinase d 100.0 1.3E-39 2.9E-44 308.2 21.3 268 157-469 4-279 (280)
103 cd05573 STKc_ROCK_NDR_like Cat 100.0 4.4E-40 9.5E-45 321.8 18.4 257 159-462 1-285 (350)
104 cd05584 STKc_p70S6K Catalytic 100.0 8.4E-40 1.8E-44 315.7 20.1 244 165-461 2-255 (323)
105 cd05594 STKc_PKB_alpha Catalyt 100.0 2.8E-40 6.1E-45 319.4 16.6 243 165-462 1-252 (325)
106 cd05107 PTKc_PDGFR_beta Cataly 100.0 9.7E-40 2.1E-44 321.8 20.7 264 158-466 36-399 (401)
107 cd05596 STKc_ROCK Catalytic do 100.0 5.3E-40 1.1E-44 322.4 18.6 255 157-462 41-304 (370)
108 PTZ00036 glycogen synthase kin 100.0 7E-40 1.5E-44 327.9 19.6 281 157-462 64-351 (440)
109 cd05618 STKc_aPKC_iota Catalyt 100.0 1E-39 2.2E-44 315.6 19.9 243 165-456 1-250 (329)
110 cd05090 PTKc_Ror1 Catalytic do 100.0 7.4E-40 1.6E-44 310.4 18.5 261 159-465 5-282 (283)
111 KOG1094 Discoidin domain recep 100.0 1.5E-40 3.3E-45 315.5 13.6 264 159-466 538-804 (807)
112 cd05589 STKc_PKN Catalytic dom 100.0 5.8E-40 1.3E-44 317.0 18.0 245 161-461 1-256 (324)
113 cd05626 STKc_LATS2 Catalytic d 100.0 1.5E-39 3.2E-44 321.1 21.1 207 160-380 2-251 (381)
114 cd07863 STKc_CDK4 Catalytic do 100.0 2.2E-39 4.9E-44 308.0 21.5 279 160-461 1-284 (288)
115 cd05588 STKc_aPKC Catalytic do 100.0 1.3E-39 2.8E-44 315.1 20.1 248 165-461 1-261 (329)
116 cd05628 STKc_NDR1 Catalytic do 100.0 1.3E-39 2.9E-44 319.3 20.3 207 159-379 1-238 (363)
117 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1.4E-39 3E-44 303.8 19.3 252 159-464 4-256 (256)
118 cd05614 STKc_MSK2_N N-terminal 100.0 1.4E-39 3E-44 315.7 20.0 255 160-462 1-267 (332)
119 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 2.2E-39 4.8E-44 307.3 21.0 272 160-466 5-283 (284)
120 cd05103 PTKc_VEGFR2 Catalytic 100.0 1.4E-39 3.1E-44 316.6 20.2 267 158-468 6-341 (343)
121 cd05071 PTKc_Src Catalytic dom 100.0 1.5E-39 3.2E-44 304.7 19.4 255 158-466 5-260 (262)
122 cd06638 STKc_myosinIIIA Cataly 100.0 1.2E-39 2.5E-44 309.6 19.0 270 149-462 8-283 (286)
123 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 1.4E-39 3E-44 308.8 19.3 276 159-466 4-283 (284)
124 cd05092 PTKc_TrkA Catalytic do 100.0 1.3E-39 2.8E-44 308.2 19.0 260 159-464 5-279 (280)
125 cd05621 STKc_ROCK2 Catalytic d 100.0 1.3E-39 2.8E-44 319.2 19.3 258 154-462 38-304 (370)
126 cd05095 PTKc_DDR2 Catalytic do 100.0 3.2E-39 7E-44 308.1 21.6 267 159-464 5-295 (296)
127 cd05591 STKc_nPKC_epsilon Cata 100.0 1.1E-39 2.5E-44 314.5 18.6 243 165-462 1-254 (321)
128 cd05590 STKc_nPKC_eta Catalyti 100.0 9.4E-40 2E-44 314.8 17.9 237 165-456 1-241 (320)
129 cd05587 STKc_cPKC Catalytic do 100.0 1E-39 2.2E-44 315.3 18.2 242 160-456 1-246 (324)
130 cd07868 STKc_CDK8 Catalytic do 100.0 2.6E-39 5.6E-44 311.9 20.9 204 164-380 6-219 (317)
131 cd06646 STKc_MAP4K5 Catalytic 100.0 1.2E-39 2.7E-44 306.2 18.2 256 158-463 8-266 (267)
132 cd05605 STKc_GRK4_like Catalyt 100.0 2.3E-39 4.9E-44 307.2 20.1 253 160-462 1-261 (285)
133 cd05059 PTKc_Tec_like Catalyti 100.0 2.9E-39 6.4E-44 301.7 20.5 250 160-463 5-255 (256)
134 cd05601 STKc_CRIK Catalytic do 100.0 6.2E-40 1.3E-44 317.8 16.5 254 159-462 1-263 (330)
135 cd05607 STKc_GRK7 Catalytic do 100.0 2.5E-39 5.3E-44 305.7 20.1 248 167-463 1-251 (277)
136 cd05032 PTKc_InsR_like Catalyt 100.0 1.2E-39 2.6E-44 308.0 17.9 261 158-464 5-276 (277)
137 cd06654 STKc_PAK1 Catalytic do 100.0 2E-39 4.4E-44 309.2 19.6 252 158-462 19-270 (296)
138 cd05084 PTKc_Fes Catalytic dom 100.0 2.7E-39 5.9E-44 301.2 19.9 249 165-464 1-251 (252)
139 cd05047 PTKc_Tie Catalytic dom 100.0 6.7E-39 1.5E-43 301.7 22.7 254 165-467 1-269 (270)
140 cd05036 PTKc_ALK_LTK Catalytic 100.0 2.7E-39 5.8E-44 305.6 20.0 262 157-464 4-276 (277)
141 cd05058 PTKc_Met_Ron Catalytic 100.0 3.3E-39 7.1E-44 302.5 20.5 257 165-467 1-260 (262)
142 cd05629 STKc_NDR_like_fungal C 100.0 1.7E-39 3.7E-44 320.4 19.3 207 159-379 1-250 (377)
143 PRK13184 pknD serine/threonine 100.0 1.9E-39 4.1E-44 337.3 20.5 269 159-468 2-292 (932)
144 cd05592 STKc_nPKC_theta_delta 100.0 1.9E-39 4E-44 312.1 19.1 241 165-460 1-246 (316)
145 cd05082 PTKc_Csk Catalytic dom 100.0 3.5E-39 7.5E-44 301.2 20.2 250 159-466 6-256 (256)
146 cd05099 PTKc_FGFR4 Catalytic d 100.0 4.2E-39 9E-44 309.8 21.4 269 158-472 11-299 (314)
147 cd05063 PTKc_EphR_A2 Catalytic 100.0 2.3E-39 5E-44 304.6 19.1 260 159-466 5-267 (268)
148 cd05051 PTKc_DDR Catalytic dom 100.0 4.8E-39 1E-43 307.0 21.5 268 158-464 4-295 (296)
149 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 4.2E-39 9E-44 301.4 20.7 254 158-465 5-259 (260)
150 cd05098 PTKc_FGFR1 Catalytic d 100.0 2.7E-39 5.8E-44 310.2 19.8 265 159-469 18-302 (307)
151 cd05101 PTKc_FGFR2 Catalytic d 100.0 5.9E-39 1.3E-43 307.4 22.2 266 158-469 14-299 (304)
152 KOG0667 Dual-specificity tyros 100.0 1E-39 2.3E-44 316.9 17.0 197 160-380 187-391 (586)
153 cd06619 PKc_MKK5 Catalytic dom 100.0 4.7E-39 1E-43 304.2 21.2 251 159-462 1-253 (279)
154 cd05109 PTKc_HER2 Catalytic do 100.0 4.1E-39 8.8E-44 304.7 20.8 262 158-469 6-271 (279)
155 cd05060 PTKc_Syk_like Catalyti 100.0 5.7E-39 1.2E-43 300.0 21.5 252 165-466 1-255 (257)
156 KOG0033 Ca2+/calmodulin-depend 100.0 2.4E-41 5.3E-46 289.0 4.9 253 157-461 9-266 (355)
157 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 1.1E-38 2.3E-43 300.2 23.3 258 165-464 1-268 (269)
158 cd05055 PTKc_PDGFR Catalytic d 100.0 4.4E-39 9.5E-44 307.7 20.9 261 159-466 35-301 (302)
159 cd05056 PTKc_FAK Catalytic dom 100.0 3.2E-39 6.9E-44 304.0 19.6 260 159-469 6-268 (270)
160 cd05091 PTKc_Ror2 Catalytic do 100.0 4.1E-39 8.9E-44 305.4 20.3 260 160-465 6-282 (283)
161 cd05065 PTKc_EphR_B Catalytic 100.0 3.5E-39 7.7E-44 303.5 19.6 261 160-466 5-268 (269)
162 cd05097 PTKc_DDR_like Catalyti 100.0 5.5E-39 1.2E-43 306.3 21.1 267 159-464 5-294 (295)
163 cd06637 STKc_TNIK Catalytic do 100.0 4.1E-39 8.8E-44 303.6 19.8 259 156-461 3-268 (272)
164 cd05616 STKc_cPKC_beta Catalyt 100.0 2E-39 4.4E-44 313.1 18.2 242 160-456 1-246 (323)
165 cd05598 STKc_LATS Catalytic do 100.0 1.4E-39 3.1E-44 320.9 17.3 208 159-380 1-247 (376)
166 cd05066 PTKc_EphR_A Catalytic 100.0 6.4E-39 1.4E-43 301.3 20.8 260 159-466 4-266 (267)
167 cd05570 STKc_PKC Catalytic dom 100.0 2.4E-39 5.3E-44 311.7 18.3 243 165-462 1-252 (318)
168 cd06639 STKc_myosinIIIB Cataly 100.0 5.4E-39 1.2E-43 305.8 20.5 269 150-462 13-287 (291)
169 KOG4279 Serine/threonine prote 100.0 3E-40 6.5E-45 318.9 11.7 245 166-461 582-831 (1226)
170 cd05575 STKc_SGK Catalytic dom 100.0 1.6E-39 3.4E-44 313.9 16.9 238 165-457 1-242 (323)
171 cd07853 STKc_NLK Catalytic dom 100.0 1.4E-39 3E-44 320.5 16.8 278 160-462 1-288 (372)
172 cd05040 PTKc_Ack_like Catalyti 100.0 1.1E-38 2.3E-43 298.1 21.8 253 165-464 1-256 (257)
173 KOG0599 Phosphorylase kinase g 100.0 6.5E-40 1.4E-44 284.4 12.5 252 159-462 17-283 (411)
174 cd08529 STKc_FA2-like Catalyti 100.0 7.2E-39 1.6E-43 299.0 20.6 251 160-462 1-253 (256)
175 cd05061 PTKc_InsR Catalytic do 100.0 2.8E-39 6E-44 307.3 18.1 265 156-466 3-278 (288)
176 cd05625 STKc_LATS1 Catalytic d 100.0 3.4E-39 7.3E-44 318.9 19.3 207 160-380 2-251 (382)
177 cd05620 STKc_nPKC_delta Cataly 100.0 2.7E-39 5.8E-44 311.0 17.9 241 165-460 1-246 (316)
178 PTZ00266 NIMA-related protein 100.0 1.4E-39 3.1E-44 339.5 17.1 260 156-461 10-294 (1021)
179 cd05086 PTKc_Aatyk2 Catalytic 100.0 2.4E-38 5.2E-43 297.6 23.7 257 165-463 1-266 (268)
180 cd07876 STKc_JNK2 Catalytic do 100.0 6E-39 1.3E-43 314.5 20.4 204 157-380 19-225 (359)
181 cd06625 STKc_MEKK3_like Cataly 100.0 9.8E-39 2.1E-43 299.4 21.0 254 159-462 2-260 (263)
182 KOG0032 Ca2+/calmodulin-depend 100.0 5.5E-39 1.2E-43 309.3 19.4 253 157-462 33-293 (382)
183 cd05067 PTKc_Lck_Blk Catalytic 100.0 8.9E-39 1.9E-43 299.2 20.4 254 158-465 5-259 (260)
184 cd06645 STKc_MAP4K3 Catalytic 100.0 3.6E-39 7.8E-44 303.1 17.8 253 159-461 9-264 (267)
185 cd05619 STKc_nPKC_theta Cataly 100.0 4.1E-39 8.9E-44 309.6 18.5 242 165-461 1-247 (316)
186 KOG0610 Putative serine/threon 100.0 3.6E-39 7.8E-44 295.6 16.8 258 159-460 77-390 (459)
187 cd05582 STKc_RSK_N N-terminal 100.0 1.6E-39 3.4E-44 313.2 15.3 241 165-458 2-245 (318)
188 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 5.4E-39 1.2E-43 302.8 18.6 242 166-464 2-274 (274)
189 cd05039 PTKc_Csk_like Catalyti 100.0 1E-38 2.3E-43 298.0 20.3 250 158-465 5-255 (256)
190 PHA03207 serine/threonine kina 100.0 4.9E-39 1.1E-43 318.2 19.1 281 158-462 91-375 (392)
191 cd00192 PTKc Catalytic domain 100.0 2.2E-38 4.7E-43 296.6 21.9 254 165-464 1-262 (262)
192 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 1.9E-38 4.2E-43 301.3 21.8 265 159-462 1-266 (287)
193 cd05622 STKc_ROCK1 Catalytic d 100.0 8.6E-39 1.9E-43 313.7 19.9 206 153-379 37-249 (371)
194 cd06624 STKc_ASK Catalytic dom 100.0 1.3E-38 2.8E-43 299.5 20.2 258 155-461 4-264 (268)
195 cd07872 STKc_PCTAIRE2 Catalyti 100.0 6.5E-39 1.4E-43 307.8 18.5 275 159-461 6-285 (309)
196 cd05069 PTKc_Yes Catalytic dom 100.0 1.4E-38 3.1E-43 297.8 20.3 253 159-465 6-259 (260)
197 cd05050 PTKc_Musk Catalytic do 100.0 1.7E-38 3.7E-43 301.9 21.1 262 158-465 4-288 (288)
198 cd05057 PTKc_EGFR_like Catalyt 100.0 1.2E-38 2.5E-43 301.6 19.7 261 159-469 7-271 (279)
199 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 2E-38 4.3E-43 297.0 21.0 242 165-463 1-261 (262)
200 cd08227 PK_STRAD_alpha Pseudok 100.0 1.5E-38 3.3E-43 307.6 20.8 206 163-380 2-213 (327)
201 cd07875 STKc_JNK1 Catalytic do 100.0 5.6E-39 1.2E-43 315.3 18.0 204 157-380 22-228 (364)
202 cd05602 STKc_SGK1 Catalytic do 100.0 3.9E-39 8.4E-44 311.4 16.6 242 165-461 1-246 (325)
203 cd06643 STKc_SLK Catalytic dom 100.0 1.3E-38 2.8E-43 301.8 19.9 251 161-462 7-262 (282)
204 cd05042 PTKc_Aatyk Catalytic d 100.0 2.9E-38 6.3E-43 297.2 22.1 257 165-463 1-267 (269)
205 cd05034 PTKc_Src_like Catalyti 100.0 8.4E-39 1.8E-43 299.5 18.3 256 157-465 4-260 (261)
206 KOG0199 ACK and related non-re 100.0 1.7E-39 3.6E-44 314.1 13.8 257 161-465 112-371 (1039)
207 PF00069 Pkinase: Protein kina 100.0 5.1E-39 1.1E-43 300.7 16.8 253 161-461 1-256 (260)
208 cd05604 STKc_SGK3 Catalytic do 100.0 2.9E-39 6.2E-44 312.3 15.5 243 165-462 1-247 (325)
209 cd06613 STKc_MAP4K3_like Catal 100.0 1.6E-38 3.5E-43 297.7 20.0 255 158-461 2-259 (262)
210 cd05617 STKc_aPKC_zeta Catalyt 100.0 1.4E-38 2.9E-43 307.7 20.0 244 165-457 1-249 (327)
211 cd06656 STKc_PAK3 Catalytic do 100.0 8.2E-39 1.8E-43 305.2 18.1 250 159-461 19-268 (297)
212 cd07867 STKc_CDC2L6 Catalytic 100.0 2.5E-38 5.4E-43 305.1 21.7 204 164-380 6-219 (317)
213 cd08219 STKc_Nek3 Catalytic do 100.0 6.1E-39 1.3E-43 299.4 16.9 251 160-462 1-252 (255)
214 cd07874 STKc_JNK3 Catalytic do 100.0 6.4E-39 1.4E-43 313.9 17.6 205 156-380 14-221 (355)
215 cd05615 STKc_cPKC_alpha Cataly 100.0 7.9E-39 1.7E-43 308.8 17.9 242 160-456 1-246 (323)
216 cd06615 PKc_MEK Catalytic doma 100.0 1.8E-38 3.8E-43 304.5 20.1 281 159-463 1-288 (308)
217 cd06644 STKc_STK10_LOK Catalyt 100.0 2.7E-38 5.8E-43 301.2 21.2 252 159-461 12-268 (292)
218 cd05110 PTKc_HER4 Catalytic do 100.0 1.2E-38 2.7E-43 304.9 19.0 264 158-471 6-273 (303)
219 cd05627 STKc_NDR2 Catalytic do 100.0 7.6E-39 1.7E-43 313.8 17.9 208 159-380 1-239 (360)
220 cd06655 STKc_PAK2 Catalytic do 100.0 1.3E-38 2.9E-43 303.5 18.7 251 159-462 19-269 (296)
221 cd05603 STKc_SGK2 Catalytic do 100.0 6.8E-39 1.5E-43 309.2 16.8 238 165-457 1-242 (321)
222 PTZ00284 protein kinase; Provi 100.0 1.4E-38 3E-43 322.2 19.6 203 153-380 123-348 (467)
223 cd05100 PTKc_FGFR3 Catalytic d 100.0 4.1E-38 9E-43 305.5 22.1 267 158-470 11-297 (334)
224 cd05632 STKc_GRK5 Catalytic do 100.0 3.1E-38 6.8E-43 299.4 20.5 252 161-462 2-261 (285)
225 cd05630 STKc_GRK6 Catalytic do 100.0 3E-38 6.5E-43 299.5 20.3 252 161-462 2-261 (285)
226 cd05085 PTKc_Fer Catalytic dom 100.0 5.7E-38 1.2E-42 291.9 21.8 247 165-464 1-249 (250)
227 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.2E-38 2.6E-43 310.5 18.0 281 155-462 11-298 (343)
228 cd06608 STKc_myosinIII_like Ca 100.0 3.5E-38 7.6E-43 297.5 20.6 262 156-461 3-271 (275)
229 cd05046 PTK_CCK4 Pseudokinase 100.0 4.2E-38 9.2E-43 297.1 21.1 260 159-464 5-274 (275)
230 cd05597 STKc_DMPK_like Catalyt 100.0 3E-38 6.6E-43 305.8 20.4 202 159-379 1-210 (331)
231 KOG0574 STE20-like serine/thre 100.0 1.4E-40 3E-45 292.3 3.7 249 161-462 35-283 (502)
232 cd08528 STKc_Nek10 Catalytic d 100.0 4.3E-38 9.4E-43 296.0 20.9 257 160-464 1-268 (269)
233 cd05073 PTKc_Hck Catalytic dom 100.0 4.7E-38 1E-42 294.3 20.9 254 158-465 5-259 (260)
234 cd06628 STKc_MAPKKK_Byr2_like 100.0 5E-38 1.1E-42 295.3 21.0 254 160-461 1-263 (267)
235 cd08217 STKc_Nek2 Catalytic do 100.0 4.6E-38 1E-42 294.9 20.6 258 160-462 1-262 (265)
236 cd06612 STKc_MST1_2 Catalytic 100.0 2E-38 4.4E-43 296.0 18.0 250 159-461 3-252 (256)
237 cd06611 STKc_SLK_like Catalyti 100.0 1.3E-38 2.8E-43 301.5 16.7 254 158-462 4-262 (280)
238 cd07861 STKc_CDK1_euk Catalyti 100.0 3.1E-38 6.7E-43 299.6 19.3 275 160-461 1-281 (285)
239 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1.7E-38 3.6E-43 301.3 17.3 266 159-467 5-271 (284)
240 cd07873 STKc_PCTAIRE1 Catalyti 100.0 2.7E-38 5.8E-43 302.5 18.8 278 159-461 6-285 (301)
241 cd08223 STKc_Nek4 Catalytic do 100.0 8.2E-38 1.8E-42 292.1 21.6 252 160-462 1-254 (257)
242 cd06609 STKc_MST3_like Catalyt 100.0 4.1E-38 8.9E-43 297.0 19.7 250 159-462 1-251 (274)
243 cd05074 PTKc_Tyro3 Catalytic d 100.0 5.3E-38 1.2E-42 296.1 20.5 265 161-466 1-272 (273)
244 PHA03209 serine/threonine kina 100.0 2.2E-38 4.8E-43 309.7 18.4 194 156-377 63-256 (357)
245 cd05044 PTKc_c-ros Catalytic d 100.0 2.6E-38 5.5E-43 297.6 18.1 254 165-464 1-268 (269)
246 PHA03211 serine/threonine kina 100.0 1.9E-38 4.2E-43 316.3 18.0 196 158-378 168-363 (461)
247 cd06651 STKc_MEKK3 Catalytic d 100.0 7.2E-38 1.6E-42 294.0 20.9 254 159-461 2-260 (266)
248 cd06617 PKc_MKK3_6 Catalytic d 100.0 5E-38 1.1E-42 297.9 19.9 253 159-461 1-260 (283)
249 cd06640 STKc_MST4 Catalytic do 100.0 7.8E-38 1.7E-42 295.6 21.2 248 160-462 5-253 (277)
250 KOG0596 Dual specificity; seri 100.0 7.3E-39 1.6E-43 302.8 13.9 254 158-462 360-627 (677)
251 cd05112 PTKc_Itk Catalytic dom 100.0 6.4E-38 1.4E-42 292.7 20.0 251 159-463 4-255 (256)
252 KOG1025 Epidermal growth facto 100.0 8.7E-39 1.9E-43 314.2 14.4 259 162-470 699-961 (1177)
253 cd06631 STKc_YSK4 Catalytic do 100.0 6.8E-38 1.5E-42 294.0 20.0 255 160-461 1-261 (265)
254 cd06636 STKc_MAP4K4_6 Catalyti 100.0 4.6E-38 9.9E-43 298.0 18.9 266 149-461 6-278 (282)
255 KOG2052 Activin A type IB rece 100.0 3.6E-38 7.7E-43 291.2 17.4 272 159-468 211-505 (513)
256 cd08221 STKc_Nek9 Catalytic do 100.0 1.3E-37 2.8E-42 290.6 21.6 252 160-463 1-254 (256)
257 KOG0577 Serine/threonine prote 100.0 5.3E-39 1.2E-43 305.3 12.1 245 161-462 28-278 (948)
258 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 1.5E-38 3.2E-43 297.3 14.9 243 165-464 1-258 (258)
259 cd06642 STKc_STK25-YSK1 Cataly 100.0 3.5E-38 7.6E-43 298.0 17.6 247 161-462 6-253 (277)
260 cd05623 STKc_MRCK_alpha Cataly 100.0 7.7E-38 1.7E-42 303.2 19.8 202 159-379 1-210 (332)
261 cd05624 STKc_MRCK_beta Catalyt 100.0 4.3E-38 9.3E-43 304.7 17.7 202 159-379 1-210 (331)
262 cd05083 PTKc_Chk Catalytic dom 100.0 7.3E-38 1.6E-42 291.9 18.2 247 159-465 6-253 (254)
263 PHA02882 putative serine/threo 100.0 1.2E-37 2.5E-42 296.7 19.8 271 158-463 11-293 (294)
264 cd05586 STKc_Sck1_like Catalyt 100.0 3.2E-38 7E-43 305.7 16.1 241 167-461 1-252 (330)
265 cd06658 STKc_PAK5 Catalytic do 100.0 4.2E-38 9.2E-43 299.4 16.6 249 161-462 24-272 (292)
266 cd06605 PKc_MAPKK Catalytic do 100.0 7.6E-38 1.6E-42 293.7 18.1 255 159-462 1-257 (265)
267 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 1.5E-37 3.2E-42 290.6 20.0 241 165-464 1-259 (259)
268 KOG4717 Serine/threonine prote 100.0 3.9E-38 8.4E-43 295.1 15.8 249 159-462 18-270 (864)
269 cd08218 STKc_Nek1 Catalytic do 100.0 2E-37 4.4E-42 289.3 20.8 251 160-462 1-253 (256)
270 cd08220 STKc_Nek8 Catalytic do 100.0 2.1E-37 4.5E-42 289.2 20.9 249 160-461 1-252 (256)
271 cd07839 STKc_CDK5 Catalytic do 100.0 5.1E-38 1.1E-42 298.0 16.9 271 160-461 1-280 (284)
272 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 1.9E-37 4.1E-42 294.4 20.3 255 159-462 1-262 (286)
273 cd05041 PTKc_Fes_like Catalyti 100.0 2.5E-37 5.4E-42 287.8 20.7 248 165-464 1-250 (251)
274 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1.5E-37 3.2E-42 295.9 18.9 204 156-380 2-207 (291)
275 cd06647 STKc_PAK_I Catalytic d 100.0 1.5E-37 3.3E-42 295.9 18.8 251 159-462 19-269 (293)
276 smart00219 TyrKc Tyrosine kina 100.0 4E-37 8.7E-42 287.5 21.4 254 161-463 1-258 (258)
277 cd07842 STKc_CDK8_like Catalyt 100.0 2.2E-37 4.7E-42 298.4 19.9 211 160-381 1-220 (316)
278 cd05609 STKc_MAST Catalytic do 100.0 1.5E-37 3.3E-42 297.8 18.6 261 159-464 1-272 (305)
279 cd06630 STKc_MEKK1 Catalytic d 100.0 3.5E-37 7.7E-42 289.7 20.7 256 160-461 1-263 (268)
280 cd06652 STKc_MEKK2 Catalytic d 100.0 4.4E-37 9.6E-42 288.5 21.3 254 159-461 2-260 (265)
281 cd07847 STKc_CDKL1_4 Catalytic 100.0 2.9E-37 6.2E-42 293.1 20.3 276 159-461 1-282 (286)
282 cd06629 STKc_MAPKKK_Bck1_like 100.0 4.3E-37 9.3E-42 289.8 21.2 255 160-461 2-268 (272)
283 cd06610 STKc_OSR1_SPAK Catalyt 100.0 4.2E-37 9E-42 288.9 21.0 261 159-461 1-263 (267)
284 KOG0584 Serine/threonine prote 100.0 1.9E-38 4.1E-43 305.4 11.7 247 163-461 44-295 (632)
285 cd06659 STKc_PAK6 Catalytic do 100.0 9.4E-38 2E-42 297.8 16.4 249 161-462 23-271 (297)
286 cd06632 STKc_MEKK1_plant Catal 100.0 2.9E-37 6.2E-42 288.5 19.3 248 160-461 1-254 (258)
287 cd06623 PKc_MAPKK_plant_like C 100.0 6.5E-37 1.4E-41 287.1 21.6 253 159-462 1-256 (264)
288 cd07844 STKc_PCTAIRE_like Cata 100.0 2.5E-37 5.4E-42 294.4 18.9 202 158-380 4-207 (291)
289 cd05574 STKc_phototropin_like 100.0 4.5E-37 9.8E-42 296.1 20.6 259 159-461 1-288 (316)
290 cd07849 STKc_ERK1_2_like Catal 100.0 1.2E-37 2.6E-42 302.6 16.6 288 157-466 3-298 (336)
291 cd06626 STKc_MEKK4 Catalytic d 100.0 5.9E-37 1.3E-41 287.5 20.7 255 160-461 1-260 (264)
292 KOG0579 Ste20-like serine/thre 100.0 1.2E-38 2.5E-43 305.0 8.6 251 160-461 33-288 (1187)
293 cd07841 STKc_CDK7 Catalytic do 100.0 3.9E-37 8.5E-42 294.0 18.9 275 160-462 1-282 (298)
294 cd07832 STKc_CCRK Catalytic do 100.0 5E-37 1.1E-41 291.5 19.4 273 160-462 1-282 (286)
295 cd07837 STKc_CdkB_plant Cataly 100.0 7E-37 1.5E-41 291.9 20.2 281 159-461 1-290 (295)
296 cd07850 STKc_JNK Catalytic dom 100.0 4.7E-37 1E-41 300.4 19.3 285 157-462 14-311 (353)
297 cd06614 STKc_PAK Catalytic dom 100.0 8.2E-37 1.8E-41 290.0 20.5 255 156-462 16-270 (286)
298 cd07846 STKc_CDKL2_3 Catalytic 100.0 2E-37 4.3E-42 294.3 16.2 271 159-461 1-282 (286)
299 cd06648 STKc_PAK_II Catalytic 100.0 7.6E-37 1.6E-41 289.9 20.1 248 161-461 21-268 (285)
300 cd07860 STKc_CDK2_3 Catalytic 100.0 4.8E-37 1E-41 291.4 18.6 273 160-461 1-280 (284)
301 cd07833 STKc_CDKL Catalytic do 100.0 4.2E-37 9E-42 292.3 17.9 277 159-461 1-284 (288)
302 cd05580 STKc_PKA Catalytic dom 100.0 5.8E-37 1.3E-41 291.6 18.8 245 159-461 1-253 (290)
303 cd06917 STKc_NAK1_like Catalyt 100.0 1E-36 2.2E-41 288.1 20.2 249 160-462 2-255 (277)
304 cd06607 STKc_TAO Catalytic dom 100.0 1.2E-36 2.5E-41 291.9 20.9 248 158-462 14-267 (307)
305 cd06641 STKc_MST3 Catalytic do 100.0 1.2E-36 2.6E-41 287.4 20.5 247 161-462 6-253 (277)
306 KOG4250 TANK binding protein k 100.0 1.6E-37 3.5E-42 302.6 14.3 288 161-470 15-314 (732)
307 cd07865 STKc_CDK9 Catalytic do 100.0 1.3E-36 2.9E-41 292.1 20.5 211 158-380 11-227 (310)
308 cd05578 STKc_Yank1 Catalytic d 100.0 6.1E-37 1.3E-41 286.4 17.2 248 160-460 1-253 (258)
309 cd08216 PK_STRAD Pseudokinase 100.0 1.5E-36 3.2E-41 292.3 20.4 281 163-462 6-295 (314)
310 cd08225 STKc_Nek5 Catalytic do 100.0 1.1E-36 2.3E-41 284.5 18.7 251 160-462 1-254 (257)
311 cd08226 PK_STRAD_beta Pseudoki 100.0 9.6E-37 2.1E-41 295.2 19.0 292 165-468 4-316 (328)
312 cd07843 STKc_CDC2L1 Catalytic 100.0 1.4E-36 3E-41 289.5 19.5 279 159-461 5-289 (293)
313 KOG4645 MAPKKK (MAP kinase kin 100.0 1.7E-38 3.8E-43 326.3 6.2 256 158-462 1234-1494(1509)
314 cd07855 STKc_ERK5 Catalytic do 100.0 7.3E-37 1.6E-41 296.8 17.0 280 158-462 4-294 (334)
315 cd07835 STKc_CDK1_like Catalyt 100.0 1.4E-36 3.1E-41 287.9 18.6 272 161-461 1-279 (283)
316 cd05633 STKc_GRK3 Catalytic do 100.0 2.2E-36 4.9E-41 285.7 19.6 243 166-462 1-255 (279)
317 cd08215 STKc_Nek Catalytic dom 100.0 4E-36 8.6E-41 280.6 21.0 252 160-461 1-254 (258)
318 cd06616 PKc_MKK4 Catalytic dom 100.0 6.4E-37 1.4E-41 291.1 15.8 257 160-462 5-267 (288)
319 cd07858 STKc_TEY_MAPK_plant Ca 100.0 1.7E-36 3.6E-41 294.6 18.8 287 158-468 4-299 (337)
320 cd05122 PKc_STE Catalytic doma 100.0 2.9E-36 6.3E-41 280.5 19.4 250 160-461 1-250 (253)
321 cd07836 STKc_Pho85 Catalytic d 100.0 3.3E-36 7.1E-41 285.6 19.9 274 160-461 1-280 (284)
322 cd08530 STKc_CNK2-like Catalyt 100.0 1.8E-36 4E-41 282.7 17.9 250 160-461 1-252 (256)
323 cd06653 STKc_MEKK3_like_1 Cata 100.0 6.5E-36 1.4E-40 280.4 21.7 254 159-461 2-260 (264)
324 PHA03390 pk1 serine/threonine- 100.0 5.4E-36 1.2E-40 281.2 21.1 247 155-461 10-261 (267)
325 cd07831 STKc_MOK Catalytic dom 100.0 3E-36 6.5E-41 285.5 19.5 272 161-461 1-278 (282)
326 KOG0604 MAP kinase-activated p 100.0 3.1E-37 6.8E-42 271.2 11.5 258 157-462 59-322 (400)
327 PHA03210 serine/threonine kina 100.0 4.6E-37 1E-41 312.1 14.5 278 158-462 147-454 (501)
328 KOG0666 Cyclin C-dependent kin 100.0 1.4E-37 2.9E-42 274.8 9.1 210 159-380 24-243 (438)
329 cd06606 STKc_MAPKKK Catalytic 100.0 4.3E-36 9.4E-41 280.5 19.5 254 160-461 1-256 (260)
330 cd07852 STKc_MAPK15 Catalytic 100.0 1.7E-36 3.8E-41 294.6 17.4 275 158-462 6-295 (337)
331 KOG0607 MAP kinase-interacting 100.0 9.1E-37 2E-41 270.4 13.7 272 151-461 75-360 (463)
332 cd07845 STKc_CDK10 Catalytic d 100.0 5E-36 1.1E-40 287.9 20.1 278 158-462 6-290 (309)
333 cd06635 STKc_TAO1 Catalytic do 100.0 9.5E-36 2.1E-40 286.8 22.1 246 161-463 27-278 (317)
334 cd05577 STKc_GRK Catalytic dom 100.0 5E-36 1.1E-40 283.3 19.5 245 167-461 1-253 (277)
335 cd06657 STKc_PAK4 Catalytic do 100.0 3.5E-36 7.6E-41 286.2 18.5 245 165-462 26-270 (292)
336 KOG0586 Serine/threonine prote 100.0 1.2E-36 2.5E-41 292.8 14.9 251 156-462 53-306 (596)
337 cd07838 STKc_CDK4_6_like Catal 100.0 1.3E-35 2.7E-40 282.0 21.7 277 161-461 1-283 (287)
338 cd07864 STKc_CDK12 Catalytic d 100.0 8.6E-36 1.9E-40 285.3 19.9 284 156-461 4-298 (302)
339 cd07840 STKc_CDK9_like Catalyt 100.0 5.4E-36 1.2E-40 284.4 18.2 277 161-461 1-283 (287)
340 cd07866 STKc_BUR1 Catalytic do 100.0 5.6E-36 1.2E-40 287.9 18.4 290 158-461 7-307 (311)
341 cd06627 STKc_Cdc7_like Catalyt 100.0 6.5E-36 1.4E-40 278.6 18.1 248 160-461 1-250 (254)
342 cd05572 STKc_cGK_PKG Catalytic 100.0 1.5E-35 3.2E-40 277.7 20.5 243 167-461 1-251 (262)
343 cd05606 STKc_beta_ARK Catalyti 100.0 1.5E-35 3.3E-40 279.9 20.7 243 166-462 1-255 (278)
344 PLN00009 cyclin-dependent kina 100.0 8.3E-36 1.8E-40 284.3 18.8 278 159-462 2-284 (294)
345 cd07834 STKc_MAPK Catalytic do 100.0 7.9E-36 1.7E-40 289.3 18.8 289 160-469 1-298 (330)
346 KOG1035 eIF-2alpha kinase GCN2 100.0 8.1E-37 1.8E-41 312.6 12.2 264 158-461 478-870 (1351)
347 KOG0983 Mitogen-activated prot 100.0 8.5E-37 1.8E-41 265.2 10.5 250 162-462 95-349 (391)
348 KOG0200 Fibroblast/platelet-de 100.0 7.6E-36 1.6E-40 307.7 19.3 271 154-468 291-581 (609)
349 cd06618 PKc_MKK7 Catalytic dom 100.0 1E-35 2.2E-40 284.0 18.4 255 158-463 14-274 (296)
350 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 1.1E-35 2.3E-40 287.4 18.6 277 154-462 5-288 (328)
351 cd05611 STKc_Rim15_like Cataly 100.0 1.7E-35 3.7E-40 276.9 19.3 244 165-463 2-249 (260)
352 cd07854 STKc_MAPK4_6 Catalytic 100.0 5.1E-36 1.1E-40 291.7 16.2 279 158-462 4-300 (342)
353 cd07830 STKc_MAK_like Catalyti 100.0 2E-35 4.3E-40 280.1 19.7 271 161-462 1-280 (283)
354 cd06633 STKc_TAO3 Catalytic do 100.0 4.2E-35 9.1E-40 281.7 22.0 245 161-462 23-273 (313)
355 cd05118 STKc_CMGC Catalytic do 100.0 2.1E-35 4.5E-40 279.9 19.5 270 161-461 1-279 (283)
356 cd07879 STKc_p38delta_MAPK13 C 100.0 1.7E-35 3.6E-40 288.1 19.0 284 158-468 14-305 (342)
357 cd07857 STKc_MPK1 Catalytic do 100.0 1.7E-35 3.6E-40 287.0 18.9 285 160-462 1-292 (332)
358 cd05583 STKc_MSK_N N-terminal 100.0 1.5E-35 3.2E-40 281.7 18.2 258 160-465 1-266 (288)
359 cd05579 STKc_MAST_like Catalyt 100.0 1.1E-35 2.3E-40 278.9 17.0 249 167-463 1-255 (265)
360 cd08222 STKc_Nek11 Catalytic d 100.0 1.6E-35 3.5E-40 277.1 18.1 251 160-461 1-256 (260)
361 cd06634 STKc_TAO2 Catalytic do 100.0 3E-35 6.6E-40 282.1 20.1 248 160-464 16-269 (308)
362 cd07877 STKc_p38alpha_MAPK14 C 100.0 2.4E-35 5.1E-40 287.2 19.1 286 150-462 8-300 (345)
363 cd05581 STKc_PDK1 Catalytic do 100.0 1.3E-35 2.8E-40 280.8 16.5 255 159-461 1-276 (280)
364 cd07880 STKc_p38gamma_MAPK12 C 100.0 1.6E-35 3.5E-40 288.1 16.9 282 154-461 10-297 (343)
365 PTZ00024 cyclin-dependent prot 100.0 3.7E-35 7.9E-40 285.1 19.2 280 158-462 7-313 (335)
366 cd05613 STKc_MSK1_N N-terminal 100.0 1E-34 2.2E-39 276.3 20.5 255 160-462 1-268 (290)
367 cd07829 STKc_CDK_like Catalyti 100.0 8.7E-35 1.9E-39 275.5 18.8 271 161-461 1-278 (282)
368 KOG0986 G protein-coupled rece 100.0 2.6E-36 5.7E-41 279.1 8.0 249 159-457 185-436 (591)
369 KOG1151 Tousled-like protein k 100.0 6.7E-36 1.5E-40 275.5 10.3 264 159-461 463-740 (775)
370 KOG0690 Serine/threonine prote 100.0 3.8E-36 8.1E-41 267.1 8.1 202 158-380 167-371 (516)
371 cd07851 STKc_p38 Catalytic dom 100.0 1.7E-35 3.6E-40 288.2 13.3 282 156-462 12-298 (343)
372 KOG1024 Receptor-like protein 100.0 2.5E-35 5.3E-40 267.9 12.7 277 151-472 276-561 (563)
373 KOG0671 LAMMER dual specificit 100.0 1.7E-35 3.7E-40 268.9 11.1 276 158-461 88-405 (415)
374 cd05123 STKc_AGC Catalytic dom 100.0 1.8E-34 4E-39 268.2 17.8 237 167-458 1-240 (250)
375 KOG1006 Mitogen-activated prot 100.0 6.5E-37 1.4E-41 264.9 0.3 253 164-462 69-327 (361)
376 KOG0587 Traf2- and Nck-interac 100.0 1.4E-34 3.1E-39 287.4 16.9 265 151-461 11-281 (953)
377 KOG0603 Ribosomal protein S6 k 100.0 7E-35 1.5E-39 282.0 13.6 242 157-462 320-563 (612)
378 KOG0612 Rho-associated, coiled 100.0 2.5E-35 5.4E-40 299.5 9.7 208 152-379 68-283 (1317)
379 cd05610 STKc_MASTL Catalytic d 100.0 3.4E-34 7.3E-39 300.0 18.3 147 159-319 4-153 (669)
380 KOG4236 Serine/threonine prote 100.0 2.9E-35 6.3E-40 276.5 9.2 246 164-462 569-819 (888)
381 cd05576 STKc_RPK118_like Catal 100.0 4.2E-34 9.1E-39 263.5 15.0 222 170-458 4-225 (237)
382 KOG0662 Cyclin-dependent kinas 100.0 5.7E-34 1.2E-38 232.8 13.5 200 160-380 3-206 (292)
383 KOG0669 Cyclin T-dependent kin 100.0 9E-36 1.9E-40 255.9 2.9 283 159-462 17-315 (376)
384 KOG0696 Serine/threonine prote 100.0 1.8E-34 3.9E-39 263.9 8.9 202 158-380 348-553 (683)
385 PLN03225 Serine/threonine-prot 100.0 2.8E-33 6.1E-38 285.9 17.1 274 157-462 130-450 (566)
386 KOG0984 Mitogen-activated prot 100.0 7.1E-34 1.5E-38 237.4 10.3 221 154-392 41-267 (282)
387 PLN03224 probable serine/threo 100.0 7.8E-33 1.7E-37 275.5 19.1 214 157-379 143-435 (507)
388 KOG1027 Serine/threonine prote 100.0 1.2E-33 2.6E-38 279.7 10.5 265 161-478 511-795 (903)
389 smart00220 S_TKc Serine/Threon 100.0 2.1E-32 4.4E-37 252.8 17.3 239 171-461 1-240 (244)
390 KOG0695 Serine/threonine prote 100.0 1.8E-32 3.9E-37 244.7 12.5 202 159-381 250-455 (593)
391 KOG1290 Serine/threonine prote 100.0 1.2E-31 2.5E-36 250.6 16.4 137 158-303 77-221 (590)
392 KOG0668 Casein kinase II, alph 100.0 7.3E-33 1.6E-37 234.8 7.4 277 156-462 35-322 (338)
393 KOG0614 cGMP-dependent protein 100.0 4.3E-33 9.2E-38 261.0 4.0 199 160-380 421-622 (732)
394 KOG0664 Nemo-like MAPK-related 100.0 6.1E-33 1.3E-37 241.2 1.9 203 162-380 56-261 (449)
395 KOG0608 Warts/lats-like serine 100.0 8E-31 1.7E-35 251.6 11.5 211 159-383 629-877 (1034)
396 KOG1152 Signal transduction se 100.0 5E-31 1.1E-35 250.8 8.6 197 159-378 561-770 (772)
397 KOG1345 Serine/threonine kinas 100.0 3.5E-30 7.6E-35 223.9 10.8 257 158-465 23-287 (378)
398 KOG0576 Mitogen-activated prot 100.0 3.5E-31 7.6E-36 255.8 4.3 254 158-461 14-270 (829)
399 KOG0670 U4/U6-associated splic 100.0 2.3E-30 4.9E-35 243.4 9.3 283 157-461 430-745 (752)
400 cd00180 PKc Catalytic domain o 100.0 1.1E-28 2.3E-33 222.6 19.2 211 167-462 1-214 (215)
401 KOG1167 Serine/threonine prote 100.0 1.9E-29 4.1E-34 232.8 13.8 290 156-462 33-381 (418)
402 KOG0665 Jun-N-terminal kinase 100.0 1.4E-29 3.1E-34 225.2 9.9 202 157-379 15-219 (369)
403 smart00221 STYKc Protein kinas 100.0 2.7E-28 5.9E-33 222.7 16.4 200 161-379 1-202 (225)
404 smart00750 KIND kinase non-cat 99.9 6.1E-27 1.3E-31 205.4 13.9 170 248-469 1-172 (176)
405 PLN00181 protein SPA1-RELATED; 99.9 2E-27 4.4E-32 255.1 10.4 207 214-462 28-265 (793)
406 KOG1164 Casein kinase (serine/ 99.9 5E-24 1.1E-28 204.7 21.9 270 160-469 19-300 (322)
407 KOG0195 Integrin-linked kinase 99.9 4.4E-26 9.5E-31 198.5 4.1 249 161-467 192-447 (448)
408 PRK09188 serine/threonine prot 99.9 1.3E-24 2.7E-29 207.9 14.1 174 156-352 15-195 (365)
409 KOG1165 Casein kinase (serine/ 99.9 1.2E-22 2.6E-27 182.1 16.2 208 158-381 27-240 (449)
410 KOG1163 Casein kinase (serine/ 99.9 1.2E-22 2.6E-27 174.3 13.0 210 156-381 12-225 (341)
411 COG0515 SPS1 Serine/threonine 99.9 2.6E-21 5.7E-26 187.4 20.3 264 161-462 2-275 (384)
412 KOG0590 Checkpoint kinase and 99.9 2.8E-23 6.2E-28 211.7 6.6 258 162-462 321-585 (601)
413 KOG4158 BRPK/PTEN-induced prot 99.9 3E-22 6.5E-27 183.6 10.8 207 216-464 274-512 (598)
414 KOG1240 Protein kinase contain 99.9 4.5E-23 9.8E-28 210.2 5.4 250 160-462 24-291 (1431)
415 PRK10359 lipopolysaccharide co 99.9 2.6E-22 5.5E-27 178.5 9.2 175 158-371 30-216 (232)
416 KOG1023 Natriuretic peptide re 99.9 9.8E-22 2.1E-26 191.3 12.8 218 212-468 1-226 (484)
417 cd05147 RIO1_euk RIO kinase fa 99.9 3.1E-21 6.7E-26 169.9 11.2 139 164-320 2-167 (190)
418 PF14531 Kinase-like: Kinase-l 99.8 6.4E-21 1.4E-25 174.6 9.3 237 162-453 15-288 (288)
419 cd05145 RIO1_like RIO kinase f 99.8 3.6E-20 7.8E-25 163.9 13.6 139 164-321 2-168 (190)
420 PRK12274 serine/threonine prot 99.8 7.1E-20 1.5E-24 159.2 11.1 192 161-379 4-209 (218)
421 KOG1166 Mitotic checkpoint ser 99.8 6.2E-20 1.4E-24 190.9 12.2 198 155-375 694-901 (974)
422 PRK10345 hypothetical protein; 99.8 4.2E-19 9.2E-24 157.6 14.4 139 162-317 5-156 (210)
423 KOG0603 Ribosomal protein S6 k 99.8 1.3E-20 2.8E-25 183.4 3.0 189 166-379 1-193 (612)
424 smart00090 RIO RIO-like kinase 99.8 5.4E-18 1.2E-22 154.5 12.2 150 153-320 22-198 (237)
425 KOG1033 eIF-2alpha kinase PEK/ 99.8 2.1E-19 4.5E-24 171.7 2.9 129 236-372 329-457 (516)
426 cd05144 RIO2_C RIO kinase fami 99.7 1.2E-17 2.7E-22 148.9 12.3 144 152-320 8-175 (198)
427 PRK14879 serine/threonine prot 99.7 1.9E-17 4.1E-22 149.6 13.1 134 165-319 2-143 (211)
428 PRK09605 bifunctional UGMP fam 99.7 2.1E-17 4.6E-22 169.5 13.2 140 156-320 330-477 (535)
429 TIGR03724 arch_bud32 Kae1-asso 99.7 3.3E-17 7.2E-22 146.5 12.0 130 166-319 1-138 (199)
430 KOG0606 Microtubule-associated 99.7 1.1E-17 2.5E-22 171.0 5.3 216 158-455 82-305 (1205)
431 cd05119 RIO RIO kinase family, 99.6 1.2E-15 2.6E-20 135.0 11.2 135 164-320 2-164 (187)
432 cd05120 APH_ChoK_like Aminogly 99.6 2E-15 4.4E-20 128.5 12.3 136 163-320 2-139 (155)
433 KOG1266 Protein kinase [Signal 99.6 1E-15 2.2E-20 137.8 7.7 163 209-375 118-280 (458)
434 PRK01723 3-deoxy-D-manno-octul 99.6 6.2E-15 1.4E-19 134.7 13.0 139 165-320 37-192 (239)
435 KOG0590 Checkpoint kinase and 99.6 1.2E-16 2.7E-21 163.3 1.6 259 159-461 20-285 (601)
436 TIGR01982 UbiB 2-polyprenylphe 99.5 2.3E-13 5.1E-18 135.1 11.2 143 164-322 122-309 (437)
437 PLN03150 hypothetical protein; 99.4 8.7E-14 1.9E-18 144.5 6.4 81 1-81 449-531 (623)
438 KOG0601 Cyclin-dependent kinas 99.4 2.7E-13 5.9E-18 132.7 7.8 204 160-378 115-328 (524)
439 KOG1243 Protein kinase [Genera 99.4 1E-11 2.3E-16 122.8 15.3 166 185-375 36-201 (690)
440 cd05151 ChoK Choline Kinase (C 99.3 5.4E-12 1.2E-16 109.7 8.6 128 164-319 3-136 (170)
441 cd05146 RIO3_euk RIO kinase fa 99.3 6.6E-11 1.4E-15 103.3 13.2 139 164-320 2-174 (197)
442 PRK04750 ubiB putative ubiquin 99.3 1.1E-11 2.4E-16 124.5 9.5 148 160-323 121-317 (537)
443 COG4248 Uncharacterized protei 99.3 2.9E-10 6.3E-15 106.6 16.9 280 161-473 13-307 (637)
444 KOG0601 Cyclin-dependent kinas 99.2 2.3E-11 5E-16 119.3 6.7 252 157-467 263-519 (524)
445 COG3642 Mn2+-dependent serine/ 99.2 2.5E-10 5.5E-15 96.0 11.4 129 165-319 2-140 (204)
446 KOG3087 Serine/threonine prote 99.1 7.5E-10 1.6E-14 92.7 11.4 143 163-319 11-165 (229)
447 cd05154 ACAD10_11_like Acyl-Co 99.1 8.8E-10 1.9E-14 100.2 12.2 146 165-320 4-207 (223)
448 KOG0606 Microtubule-associated 99.1 6.1E-11 1.3E-15 122.6 4.3 210 157-380 802-1038(1205)
449 PLN03150 hypothetical protein; 99.1 1.1E-10 2.4E-15 121.4 5.7 82 1-83 425-507 (623)
450 KOG3741 Poly(A) ribonuclease s 99.0 6.4E-09 1.4E-13 100.2 15.3 175 171-375 288-474 (655)
451 PF01163 RIO1: RIO1 family; I 99.0 3.9E-09 8.4E-14 91.9 11.2 125 174-320 1-156 (188)
452 PLN00113 leucine-rich repeat r 99.0 4E-10 8.7E-15 125.0 5.9 82 1-83 506-588 (968)
453 PRK15123 lipopolysaccharide co 99.0 1.4E-08 3E-13 93.9 14.7 145 166-319 29-194 (268)
454 COG0478 RIO-like serine/threon 98.9 1.7E-08 3.6E-13 90.4 10.1 135 161-319 93-251 (304)
455 KOG0617 Ras suppressor protein 98.8 6.6E-10 1.4E-14 91.4 0.8 77 1-80 40-116 (264)
456 PF06293 Kdo: Lipopolysacchari 98.8 8.1E-08 1.8E-12 85.9 13.3 110 203-320 56-171 (206)
457 PRK09902 hypothetical protein; 98.8 2.2E-07 4.7E-12 81.4 15.1 158 152-319 11-179 (216)
458 KOG2137 Protein kinase [Signal 98.8 3.6E-09 7.8E-14 105.6 3.6 101 275-377 107-210 (700)
459 PF13855 LRR_8: Leucine rich r 98.6 2.8E-08 6E-13 69.8 2.6 57 18-75 1-59 (61)
460 PF06176 WaaY: Lipopolysacchar 98.6 8.8E-07 1.9E-11 77.9 11.7 141 158-318 30-182 (229)
461 KOG0617 Ras suppressor protein 98.5 2.5E-08 5.3E-13 82.3 1.1 73 1-75 63-137 (264)
462 PF13855 LRR_8: Leucine rich r 98.5 7.7E-08 1.7E-12 67.5 3.0 53 1-54 8-61 (61)
463 PF12799 LRR_4: Leucine Rich r 98.5 9.9E-08 2.1E-12 61.4 2.7 38 18-56 1-38 (44)
464 PF12260 PIP49_C: Protein-kina 98.5 3.1E-06 6.7E-11 74.1 12.5 106 206-321 7-113 (188)
465 KOG0472 Leucine-rich repeat pr 98.4 5.9E-08 1.3E-12 90.5 1.6 73 1-76 235-308 (565)
466 COG0661 AarF Predicted unusual 98.4 5.4E-07 1.2E-11 90.4 8.3 142 165-323 131-318 (517)
467 TIGR02172 Fb_sc_TIGR02172 Fibr 98.4 4.1E-06 8.9E-11 75.9 12.3 139 165-319 7-182 (226)
468 KOG0472 Leucine-rich repeat pr 98.4 1.5E-07 3.3E-12 87.9 2.0 52 2-55 420-471 (565)
469 KOG0444 Cytoskeletal regulator 98.3 9.1E-08 2E-12 94.1 -0.1 75 1-77 110-185 (1255)
470 COG1718 RIO1 Serine/threonine 98.3 1.1E-05 2.4E-10 71.8 12.4 152 149-320 35-216 (268)
471 PF14580 LRR_9: Leucine-rich r 98.2 6.1E-07 1.3E-11 76.9 2.7 71 1-75 26-98 (175)
472 KOG0576 Mitogen-activated prot 98.1 5.9E-07 1.3E-11 89.1 1.0 185 161-377 244-430 (829)
473 PF01636 APH: Phosphotransfera 98.1 2.8E-05 6E-10 71.1 11.8 147 165-319 3-197 (239)
474 COG2112 Predicted Ser/Thr prot 98.1 1.7E-05 3.8E-10 66.7 9.1 129 162-319 25-155 (201)
475 cd05150 APH Aminoglycoside 3'- 98.1 2.9E-05 6.3E-10 71.6 11.8 142 166-319 5-193 (244)
476 PF10707 YrbL-PhoP_reg: PhoP r 98.0 9.7E-05 2.1E-09 65.0 12.7 133 164-318 6-171 (199)
477 KOG0444 Cytoskeletal regulator 98.0 5.3E-07 1.2E-11 88.9 -2.1 73 1-75 229-301 (1255)
478 PF13095 FTA2: Kinetochore Sim 98.0 8.8E-05 1.9E-09 64.7 11.7 130 159-317 37-206 (207)
479 KOG1235 Predicted unusual prot 98.0 3.7E-05 8.1E-10 77.1 10.7 140 165-322 167-357 (538)
480 KOG4579 Leucine-rich repeat (L 98.0 6.7E-07 1.4E-11 71.2 -1.5 73 1-75 60-133 (177)
481 PLN02876 acyl-CoA dehydrogenas 98.0 0.00011 2.4E-09 79.7 14.1 84 164-249 43-130 (822)
482 KOG0618 Serine/threonine phosp 97.9 2.3E-06 4.9E-11 88.3 0.2 75 1-78 414-489 (1081)
483 PF14580 LRR_9: Leucine-rich r 97.9 5.9E-06 1.3E-10 70.9 2.0 73 1-76 49-124 (175)
484 cd05155 APH_ChoK_like_1 Unchar 97.9 0.00011 2.3E-09 67.4 10.0 32 288-319 163-194 (235)
485 KOG1259 Nischarin, modulator o 97.8 5.1E-06 1.1E-10 75.0 1.1 72 1-75 291-362 (490)
486 PF12799 LRR_4: Leucine Rich r 97.8 1E-05 2.2E-10 52.0 2.1 33 1-35 8-40 (44)
487 KOG4194 Membrane glycoprotein 97.7 8.9E-06 1.9E-10 79.9 0.1 74 2-75 277-351 (873)
488 KOG1035 eIF-2alpha kinase GCN2 97.6 0.0001 2.2E-09 78.6 7.0 200 205-463 229-435 (1351)
489 cd05157 ETNK_euk Ethanolamine 97.6 0.00045 9.8E-09 63.2 10.4 75 165-250 4-79 (235)
490 PRK10593 hypothetical protein; 97.6 0.0011 2.4E-08 62.9 12.6 80 163-250 18-100 (297)
491 KOG4194 Membrane glycoprotein 97.6 1.1E-05 2.4E-10 79.3 -1.1 55 1-55 300-354 (873)
492 PRK15387 E3 ubiquitin-protein 97.5 5.3E-05 1.1E-09 79.9 2.5 51 18-75 382-432 (788)
493 KOG4579 Leucine-rich repeat (L 97.5 1.4E-05 3E-10 63.9 -1.6 75 1-78 84-158 (177)
494 TIGR02721 ycfN_thiK thiamine k 97.4 0.0016 3.4E-08 60.5 11.6 140 166-319 3-175 (256)
495 KOG0532 Leucine-rich repeat (L 97.4 2.5E-05 5.4E-10 76.6 -0.4 72 1-75 105-176 (722)
496 PRK09550 mtnK methylthioribose 97.4 0.003 6.5E-08 61.9 13.3 76 165-249 32-117 (401)
497 KOG4237 Extracellular matrix p 97.4 6.2E-05 1.3E-09 70.7 1.4 79 2-80 282-361 (498)
498 KOG2268 Serine/threonine prote 97.4 0.00013 2.9E-09 67.3 3.6 135 160-319 93-251 (465)
499 cd05156 ChoK_euk Choline Kinas 97.4 0.00098 2.1E-08 63.6 9.6 145 165-319 4-213 (302)
500 cd05153 HomoserineK_II Homoser 97.4 0.00099 2.2E-08 63.3 9.3 149 164-319 19-205 (296)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=4e-55 Score=481.45 Aligned_cols=416 Identities=26% Similarity=0.437 Sum_probs=277.8
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccccccccCcccccCCCccccC
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIKGVFSNSSAISLDGNVNLCG 80 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~l~g 80 (484)
|++|+++|.+|..++++++|+.|||++|+++|.+|..+.++++|+.|++++|+|+|.+|..+.+..+....+.+|+.+||
T Consensus 530 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~ 609 (968)
T PLN00113 530 LSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCG 609 (968)
T ss_pred CCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCCCcchhcccChhhhcCCccccC
Confidence 35566666666666666666666666666666666666666666666666666666666555555555566677777776
Q ss_pred CCccccccccccccccccccccceEEehhhhhhHHHhhhhheeeeeecccCCCC-CCCC-Cchhh-------hhhccccH
Q 011508 81 GISELHLCTCSTKESKQSRSRSLKLIIPIVTGILFLTGMSCLIITSWWSKTKRE-PSTP-PSALL-------ASVLRVSY 151 (484)
Q Consensus 81 ~~~~~~~~~c~~~~~~~~~~~~~~~~i~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~-------~~~~~~~~ 151 (484)
..+....+.|... . ......+++++++++++++++++++++.++++++.. .... ..... .....+++
T Consensus 610 ~~~~~~~~~c~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 685 (968)
T PLN00113 610 GDTTSGLPPCKRV---R-KTPSWWFYITCTLGAFLVLALVAFGFVFIRGRNNLELKRVENEDGTWELQFFDSKVSKSITI 685 (968)
T ss_pred CccccCCCCCccc---c-ccceeeeehhHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccchhhhH
Confidence 5433222334221 0 111222333333333333222222222222221111 1000 00000 00112333
Q ss_pred HhHHHhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeec
Q 011508 152 QNLFKATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVD 231 (484)
Q Consensus 152 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 231 (484)
+++. ..|...+.||+|+||.||+|+.. .++..||+|.++.... ....|++.+++++||||++++++|..
T Consensus 686 ~~~~---~~~~~~~~ig~G~~g~Vy~~~~~--~~~~~vavK~~~~~~~----~~~~~~~~l~~l~HpnIv~~~~~~~~-- 754 (968)
T PLN00113 686 NDIL---SSLKEENVISRGKKGASYKGKSI--KNGMQFVVKEINDVNS----IPSSEIADMGKLQHPNIVKLIGLCRS-- 754 (968)
T ss_pred HHHH---hhCCcccEEccCCCeeEEEEEEC--CCCcEEEEEEccCCcc----ccHHHHHHHhhCCCCCcceEEEEEEc--
Confidence 3332 45777889999999999999853 3568899998864332 12356889999999999999999754
Q ss_pred cCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEE
Q 011508 232 FQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHV 311 (484)
Q Consensus 232 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl 311 (484)
.+..++||||+++|+|.++++ .++|.++..++.|+++||+|||+.++.+|+||||||+||+++.++.+++
T Consensus 755 ---~~~~~lv~Ey~~~g~L~~~l~-------~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~ 824 (968)
T PLN00113 755 ---EKGAYLIHEYIEGKNLSEVLR-------NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHL 824 (968)
T ss_pred ---CCCCEEEEeCCCCCcHHHHHh-------cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEE
Confidence 346799999999999999996 2789999999999999999999777789999999999999999988887
Q ss_pred cccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHH
Q 011508 312 SDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFV 391 (484)
Q Consensus 312 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 391 (484)
. ||....... .....++..|+|||++.+..++.++|||||||++|||+||+.||+........+.+|.
T Consensus 825 ~-~~~~~~~~~-----------~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~ 892 (968)
T PLN00113 825 R-LSLPGLLCT-----------DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWA 892 (968)
T ss_pred E-ecccccccc-----------CCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHH
Confidence 5 554433211 1112578999999999999999999999999999999999999976555555666776
Q ss_pred Hhhcchh-hhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHHHH
Q 011508 392 KEALPER-LAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRNKL 470 (484)
Q Consensus 392 ~~~~~~~-~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~ 470 (484)
+...... ...++|+.+..... ...++..++.+++.+||+.||++||||+||+++|+++.+..
T Consensus 893 ~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~~ 955 (968)
T PLN00113 893 RYCYSDCHLDMWIDPSIRGDVS-----------------VNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRSS 955 (968)
T ss_pred HHhcCccchhheeCccccCCCC-----------------ccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhccc
Confidence 6544332 44555655433111 02334667899999999999999999999999999886644
No 2
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-55 Score=420.00 Aligned_cols=289 Identities=41% Similarity=0.660 Sum_probs=244.3
Q ss_pred hhccccHHhHHHhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEe
Q 011508 145 SVLRVSYQNLFKATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKII 224 (484)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~ 224 (484)
....|++.++..+|++|+..+.||+|+||.||+|.+.+ ++.||||++.........+|.+|++++.+++|||+|+++
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~---~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~Ll 137 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSD---GTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLL 137 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECC---CCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEE
Confidence 45679999999999999999999999999999999874 478999988765433145699999999999999999999
Q ss_pred eeeeeeccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeec
Q 011508 225 TSCVSVDFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLD 304 (484)
Q Consensus 225 ~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~ 304 (484)
|||.+.+ .+.+||||||++|+|.++|+..... .++|..|++|+.++|+||+|||+.+..+|+||||||+|||||
T Consensus 138 GyC~e~~----~~~~LVYEym~nGsL~d~L~~~~~~--~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD 211 (361)
T KOG1187|consen 138 GYCLEGG----EHRLLVYEYMPNGSLEDHLHGKKGE--PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLD 211 (361)
T ss_pred EEEecCC----ceEEEEEEccCCCCHHHHhCCCCCC--CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeEC
Confidence 9996433 2589999999999999999865433 789999999999999999999998788999999999999999
Q ss_pred CCCceEEcccCccccccc-ccccCCCCccccccc-cccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCc-
Q 011508 305 GELTAHVSDFGLAKFLPE-AANNLSSNQSSSVGV-KGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMF- 381 (484)
Q Consensus 305 ~~~~~kl~Dfg~a~~~~~-~~~~~~~~~~~~~~~-~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~- 381 (484)
+++++||+|||+|+..+. ... .... .||.+|+|||+...+..+.|+|||||||+|+||+||+.|.+...
T Consensus 212 ~~~~aKlsDFGLa~~~~~~~~~--------~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~ 283 (361)
T KOG1187|consen 212 EDFNAKLSDFGLAKLGPEGDTS--------VSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRP 283 (361)
T ss_pred CCCCEEccCccCcccCCccccc--------eeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCC
Confidence 999999999999976543 110 0111 69999999999999999999999999999999999999887644
Q ss_pred cCCccHhHHHHhhcchh-hhhhcCccccc-ccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHH
Q 011508 382 TGNLTLHNFVKEALPER-LAEIVDPVLLV-EREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEV 459 (484)
Q Consensus 382 ~~~~~~~~~~~~~~~~~-~~~~~d~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev 459 (484)
.+...+..|........ +.+++|+.+.. ... ..++...+..++..|++.+|++||+|.||
T Consensus 284 ~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~------------------~~~~~~~~~~~a~~C~~~~~~~RP~m~~V 345 (361)
T KOG1187|consen 284 RGELSLVEWAKPLLEEGKLREIVDPRLKEGEYP------------------DEKEVKKLAELALRCLRPDPKERPTMSQV 345 (361)
T ss_pred cccccHHHHHHHHHHCcchhheeCCCccCCCCC------------------hHHHHHHHHHHHHHHcCcCCCcCcCHHHH
Confidence 34455888887777764 99999999863 111 11347779999999999999999999999
Q ss_pred HHHHHHHHH
Q 011508 460 AAQLLSFRN 468 (484)
Q Consensus 460 l~~L~~i~~ 468 (484)
+++|+.+..
T Consensus 346 v~~L~~~~~ 354 (361)
T KOG1187|consen 346 VKELEGILS 354 (361)
T ss_pred HHHHHhhcc
Confidence 999966543
No 3
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-49 Score=379.82 Aligned_cols=260 Identities=34% Similarity=0.477 Sum_probs=209.4
Q ss_pred CccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccc--hHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCceee
Q 011508 162 SLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGA--SKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFEA 239 (484)
Q Consensus 162 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 239 (484)
.+.+.||+|+||+||+|.|+. ...||||++....... .+.|.+|+.+|.+++|||||+++|+|.... ...+
T Consensus 44 ~~~~~iG~G~~g~V~~~~~~g---~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~----~~~~ 116 (362)
T KOG0192|consen 44 PIEEVLGSGSFGTVYKGKWRG---TDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPP----GSLC 116 (362)
T ss_pred hhhhhcccCCceeEEEEEeCC---ceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC----CceE
Confidence 445669999999999999872 2339999998654333 458999999999999999999999985432 2579
Q ss_pred EEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC-eeecCCCCCCeeecCCC-ceEEcccCcc
Q 011508 240 LVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETP-IVHCDLKPSNVLLDGEL-TAHVSDFGLA 317 (484)
Q Consensus 240 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~-ivH~dlk~~NIll~~~~-~~kl~Dfg~a 317 (484)
+|||||++|+|.++++.. ....+++..++.++.|||+||.||| +++ ||||||||+|||++.++ ++||+|||++
T Consensus 117 iVtEy~~~GsL~~~l~~~--~~~~l~~~~~l~~aldiArGm~YLH---~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGls 191 (362)
T KOG0192|consen 117 IVTEYMPGGSLSVLLHKK--RKRKLPLKVRLRIALDIARGMEYLH---SEGPIIHRDLKSDNILVDLKGKTLKIADFGLS 191 (362)
T ss_pred EEEEeCCCCcHHHHHhhc--ccCCCCHHHHHHHHHHHHHHHHHHh---cCCCeeecccChhhEEEcCCCCEEEECCCccc
Confidence 999999999999999864 3456999999999999999999999 777 99999999999999997 9999999999
Q ss_pred cccccccccCCCCccccccccccccccCccccC--CCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhc
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGM--GSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEAL 395 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~--~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 395 (484)
+...... .......||+.|||||++. ...|+.|+||||||+++|||+||+.||..... .......+..
T Consensus 192 r~~~~~~-------~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~-~~~~~~v~~~-- 261 (362)
T KOG0192|consen 192 REKVISK-------TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP-VQVASAVVVG-- 261 (362)
T ss_pred eeecccc-------ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH-HHHHHHHHhc--
Confidence 8764321 1122256999999999999 66999999999999999999999999987533 1111111100
Q ss_pred chhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHHHHhh
Q 011508 396 PERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRNKLVK 472 (484)
Q Consensus 396 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~~~ 472 (484)
.... ..+..|+..+..++.+||+.||.+||++.|++..|+.+......
T Consensus 262 ----------~~Rp-------------------~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~~ 309 (362)
T KOG0192|consen 262 ----------GLRP-------------------PIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHISS 309 (362)
T ss_pred ----------CCCC-------------------CCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhcc
Confidence 0000 01233678899999999999999999999999999999877654
No 4
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=8.4e-50 Score=362.30 Aligned_cols=251 Identities=27% Similarity=0.369 Sum_probs=205.4
Q ss_pred CccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCc-eee
Q 011508 162 SLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGND-FEA 239 (484)
Q Consensus 162 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~-~~~ 239 (484)
+..+.||+|..|+||+++ +..+++.+|+|++..... ...+++.+|+++++..+||+||++||.|.. +. ...
T Consensus 82 e~~~~lG~G~gG~V~kv~--Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~-----~~~~is 154 (364)
T KOG0581|consen 82 ERLGVLGSGNGGTVYKVR--HKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYS-----NGEEIS 154 (364)
T ss_pred hhhhhcccCCCcEEEEEE--EcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEe-----CCceEE
Confidence 456889999999999999 666789999999965443 345789999999999999999999999643 33 589
Q ss_pred EEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcccc
Q 011508 240 LVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKF 319 (484)
Q Consensus 240 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~ 319 (484)
|+||||++|||++++... +++++...-+|+.++++||.|||+ .++||||||||+|||++..|++||||||.+..
T Consensus 155 I~mEYMDgGSLd~~~k~~----g~i~E~~L~~ia~~VL~GL~YLh~--~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~ 228 (364)
T KOG0581|consen 155 ICMEYMDGGSLDDILKRV----GRIPEPVLGKIARAVLRGLSYLHE--ERKIIHRDIKPSNLLVNSKGEVKICDFGVSGI 228 (364)
T ss_pred eehhhcCCCCHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHhh--ccCeeeccCCHHHeeeccCCCEEeccccccHH
Confidence 999999999999999743 459999999999999999999995 49999999999999999999999999999987
Q ss_pred cccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchhh
Q 011508 320 LPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPERL 399 (484)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 399 (484)
+... ....+.||..|||||.+.+..|+.++||||||++++|+.+|+.||.........+.+...
T Consensus 229 lvnS---------~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~------- 292 (364)
T KOG0581|consen 229 LVNS---------IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLC------- 292 (364)
T ss_pred hhhh---------hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHH-------
Confidence 7432 234567999999999999999999999999999999999999999764222222222211
Q ss_pred hhhcCcccccccccccchhhhhhhccccccchh-HHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 400 AEIVDPVLLVEREEGETSEANAHKQRTRSFGGK-ECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 400 ~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
.+++ ..+.. . +. .|..++..++..||+.||.+|||++|+++.
T Consensus 293 -~Iv~----~ppP~---------------l-P~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 293 -AIVD----EPPPR---------------L-PEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred -HHhc----CCCCC---------------C-CcccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 1221 11000 0 22 367889999999999999999999999864
No 5
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.8e-49 Score=372.84 Aligned_cols=256 Identities=31% Similarity=0.486 Sum_probs=211.4
Q ss_pred CCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCceeeE
Q 011508 161 FSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFEAL 240 (484)
Q Consensus 161 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 240 (484)
+.+.+.||+|.||.||.|.|+ ....||+|.++.. ....++|.+|+++|++|+|+|||+++++|...+ .++|
T Consensus 208 l~l~~~LG~G~FG~V~~g~~~---~~~~vavk~ik~~-~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~-----piyI 278 (468)
T KOG0197|consen 208 LKLIRELGSGQFGEVWLGKWN---GSTKVAVKTIKEG-SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQE-----PIYI 278 (468)
T ss_pred HHHHHHhcCCccceEEEEEEc---CCCcccceEEecc-ccChhHHHHHHHHHHhCcccCeEEEEEEEecCC-----ceEE
Confidence 456788999999999999998 3457999999865 334578999999999999999999999985433 7899
Q ss_pred EeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccccc
Q 011508 241 VYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFL 320 (484)
Q Consensus 241 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~ 320 (484)
|||||+.|+|.+||+. .....+...+.+.++.|||+|++||+ ++++|||||.++||||+++..+||+|||+|+..
T Consensus 279 VtE~m~~GsLl~yLr~--~~~~~l~~~~Ll~~a~qIaeGM~YLe---s~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~ 353 (468)
T KOG0197|consen 279 VTEYMPKGSLLDYLRT--REGGLLNLPQLLDFAAQIAEGMAYLE---SKNYIHRDLAARNILVDEDLVVKISDFGLARLI 353 (468)
T ss_pred EEEecccCcHHHHhhh--cCCCccchHHHHHHHHHHHHHHHHHH---hCCccchhhhhhheeeccCceEEEccccccccc
Confidence 9999999999999985 34556899999999999999999999 999999999999999999999999999999955
Q ss_pred ccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhhcchhh
Q 011508 321 PEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEALPERL 399 (484)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 399 (484)
.++.. .......-+..|.|||.+..+.++.|||||||||+||||+| |+.|+..+... +.+.
T Consensus 354 ~d~~Y------~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~-----ev~~------- 415 (468)
T KOG0197|consen 354 GDDEY------TASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNE-----EVLE------- 415 (468)
T ss_pred CCCce------eecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHH-----HHHH-------
Confidence 43332 12223345788999999999999999999999999999999 99998765321 1111
Q ss_pred hhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHHH
Q 011508 400 AEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRNK 469 (484)
Q Consensus 400 ~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~ 469 (484)
.++. ..+-..|+.|+.++.++|..||+.+|++|||++.+...|+++...
T Consensus 416 --~le~-------------------GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~ 464 (468)
T KOG0197|consen 416 --LLER-------------------GYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTS 464 (468)
T ss_pred --HHhc-------------------cCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhc
Confidence 1111 111222778999999999999999999999999999998887543
No 6
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.1e-48 Score=372.10 Aligned_cols=249 Identities=26% Similarity=0.347 Sum_probs=208.2
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeecc---CccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQ---HRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
.+|...+.||+|||+.||+++ +..++..||+|++.+. .....+...+|+++.++|+|||||+++++ |++.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~--~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~-----FEDs 90 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEAR--DLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHF-----FEDS 90 (592)
T ss_pred ceeeeeeeeccCcceEEEEEE--EcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeE-----eecC
Confidence 579999999999999999999 4447889999999753 34455778999999999999999999999 6778
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
++.|+|.|+|+.++|..+++. .+.+++.++..+.+||+.||.||| +++|+|||||..|+|++++.++||+|||
T Consensus 91 ~nVYivLELC~~~sL~el~Kr----rk~ltEpEary~l~QIv~GlkYLH---~~~IiHRDLKLGNlfL~~~~~VKIgDFG 163 (592)
T KOG0575|consen 91 NNVYIVLELCHRGSLMELLKR----RKPLTEPEARYFLRQIVEGLKYLH---SLGIIHRDLKLGNLFLNENMNVKIGDFG 163 (592)
T ss_pred CceEEEEEecCCccHHHHHHh----cCCCCcHHHHHHHHHHHHHHHHHH---hcCceecccchhheeecCcCcEEecccc
Confidence 899999999999999999973 346999999999999999999999 9999999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhc
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEAL 395 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 395 (484)
+|..+... .......+||+.|.|||++.....+..+||||+||+||.|++|++||+.. .+.+.....
T Consensus 164 LAt~le~~-------~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk-----~vkety~~I- 230 (592)
T KOG0575|consen 164 LATQLEYD-------GERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETK-----TVKETYNKI- 230 (592)
T ss_pred eeeeecCc-------ccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccc-----hHHHHHHHH-
Confidence 99987432 24455689999999999999999999999999999999999999999752 111111110
Q ss_pred chhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 396 PERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 396 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
. ..++ ..|.....+..+||..+|++||.+|||+++|+..
T Consensus 231 -------k----~~~Y-----------------~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h 269 (592)
T KOG0575|consen 231 -------K----LNEY-----------------SMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDH 269 (592)
T ss_pred -------H----hcCc-----------------ccccccCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 0 0000 0012225567899999999999999999999854
No 7
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.2e-49 Score=346.41 Aligned_cols=256 Identities=23% Similarity=0.333 Sum_probs=205.5
Q ss_pred CCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC--ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH--RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
+|.+.++||+|+||.||++. ...++..+|.|.++... .........|+.+|++|+|||||+++++-+ .+++..
T Consensus 20 ~y~Il~~IG~GsFg~vykv~--~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f---~~~~ev 94 (375)
T KOG0591|consen 20 DYQILKKIGRGSFGEVYKVQ--CLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSF---IEDNEV 94 (375)
T ss_pred HHHHHHHHcCCcchheEEee--eccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhh---hccchh
Confidence 46788999999999999998 55578999999987443 233457889999999999999999988532 233444
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eeecCCCCCCeeecCCCceEEcccC
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETP--IVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
.+||||+|..|+|.+.++..+...+.+++..+|+++.|++.||.++|+.. .. |+||||||.||+++.+|.+||+|||
T Consensus 95 lnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~-~r~~VmHRDIKPaNIFl~~~gvvKLGDfG 173 (375)
T KOG0591|consen 95 LNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKI-PRGTVMHRDIKPANIFLTANGVVKLGDFG 173 (375)
T ss_pred hHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccc-cccceeeccCcchheEEcCCCceeeccch
Confidence 89999999999999999998888889999999999999999999999421 44 9999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhc
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEAL 395 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 395 (484)
+++.+... .......+||+.||+||.+...+|+.||||||+||++|||..-++||.+. .+...-...-
T Consensus 174 L~r~l~s~-------~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~-----n~~~L~~KI~ 241 (375)
T KOG0591|consen 174 LGRFLSSK-------TTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD-----NLLSLCKKIE 241 (375)
T ss_pred hHhHhcch-------hHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc-----cHHHHHHHHH
Confidence 99987543 33445578999999999999999999999999999999999999999763 2221111110
Q ss_pred chhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHH
Q 011508 396 PERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVA 460 (484)
Q Consensus 396 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl 460 (484)
......+ ..+-.+..+..|+..|+..||+.||+.-.++
T Consensus 242 qgd~~~~---------------------------p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v 279 (375)
T KOG0591|consen 242 QGDYPPL---------------------------PDEHYSTDLRELINMCIAVDPEQRPDTVPYV 279 (375)
T ss_pred cCCCCCC---------------------------cHHHhhhHHHHHHHHHccCCcccCCCcchHH
Confidence 0000000 0133467889999999999999999854433
No 8
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=3e-48 Score=355.11 Aligned_cols=202 Identities=31% Similarity=0.528 Sum_probs=177.7
Q ss_pred hcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeecc--CccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCC
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQ--HRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQG 234 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 234 (484)
..++|.+.+.||+|+||+||+|+.+ .++..||||.+.+. .....+.+..|+.+|+.++|||||.+++++. .
T Consensus 8 ~~~~y~~~~~iG~GsfavVykg~h~--~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~-----~ 80 (429)
T KOG0595|consen 8 VVGDYELSREIGSGSFAVVYKGRHK--KSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIE-----D 80 (429)
T ss_pred ccccceehhhccCcceEEEEEeEec--cCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEe-----c
Confidence 3468999999999999999999954 45689999999766 3445567889999999999999999999954 4
Q ss_pred CceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCC------Cc
Q 011508 235 NDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGE------LT 308 (484)
Q Consensus 235 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~------~~ 308 (484)
+++.++|||||.||+|.+|++... .+++..+..++.||+.||++|| +++||||||||+||||+.. -.
T Consensus 81 ~~~i~lVMEyC~gGDLs~yi~~~~----~l~e~t~r~Fm~QLA~alq~L~---~~~IiHRDLKPQNiLLs~~~~~~~~~~ 153 (429)
T KOG0595|consen 81 DDFIYLVMEYCNGGDLSDYIRRRG----RLPEATARHFMQQLASALQFLH---ENNIIHRDLKPQNILLSTTARNDTSPV 153 (429)
T ss_pred CCeEEEEEEeCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCcceEEeccCCCCCCCce
Confidence 459999999999999999998543 5899999999999999999999 9999999999999999765 46
Q ss_pred eEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCC
Q 011508 309 AHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEM 380 (484)
Q Consensus 309 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~ 380 (484)
+||+|||+|+.+.. .......+|++.|||||++...+|+.|+|+||+|+++|++++|+.||+..
T Consensus 154 LKIADFGfAR~L~~--------~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~ 217 (429)
T KOG0595|consen 154 LKIADFGFARFLQP--------GSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAE 217 (429)
T ss_pred EEecccchhhhCCc--------hhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCcccc
Confidence 89999999998853 23334578999999999999999999999999999999999999999864
No 9
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.6e-48 Score=354.12 Aligned_cols=254 Identities=24% Similarity=0.344 Sum_probs=202.0
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCcc-------chHHHHHHHHHHHcCCCCCceeEeeeeeee
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRG-------ASKSFIAECQALRSIRHRNLVKIITSCVSV 230 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~-------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 230 (484)
.+.|.+.+.||+|+||.|-+|. +..+++.||||++++.... ......+|+++|++|+|||||+++++
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~--e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~---- 244 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAY--EKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDF---- 244 (475)
T ss_pred cceeEeeeeecCCceeEEEEEE--EcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeee----
Confidence 3568889999999999999999 5667899999999864321 12345799999999999999999999
Q ss_pred ccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCC---C
Q 011508 231 DFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGE---L 307 (484)
Q Consensus 231 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~---~ 307 (484)
+...+..|+||||++||+|.+++-.+. .+.+..-..+++|++.|+.||| ++||+||||||+|||++.+ .
T Consensus 245 -f~~~ds~YmVlE~v~GGeLfd~vv~nk----~l~ed~~K~~f~Qll~avkYLH---~~GI~HRDiKPeNILl~~~~e~~ 316 (475)
T KOG0615|consen 245 -FEVPDSSYMVLEYVEGGELFDKVVANK----YLREDLGKLLFKQLLTAVKYLH---SQGIIHRDIKPENILLSNDAEDC 316 (475)
T ss_pred -eecCCceEEEEEEecCccHHHHHHhcc----ccccchhHHHHHHHHHHHHHHH---HcCcccccCCcceEEeccCCcce
Confidence 455558899999999999999987443 3667777889999999999999 9999999999999999765 7
Q ss_pred ceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCC---CcccceehhhHHHHHHHhCCCCCCCCccCC
Q 011508 308 TAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEV---STSGDVYSFGILLLEMFTGKGPTNEMFTGN 384 (484)
Q Consensus 308 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~---~~~~Dvws~Gvvl~elltg~~p~~~~~~~~ 384 (484)
.+||+|||+|+... ........+||+.|.|||++.+..+ ..+.|+||+||+||-+++|.+||.+.....
T Consensus 317 llKItDFGlAK~~g--------~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~ 388 (475)
T KOG0615|consen 317 LLKITDFGLAKVSG--------EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDP 388 (475)
T ss_pred EEEecccchhhccc--------cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCc
Confidence 89999999999763 2344456899999999999887543 347899999999999999999998754332
Q ss_pred ccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 385 LTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
....+..+..+ ... ...+.+...+..+++.+||..||++|||+.|+++.
T Consensus 389 sl~eQI~~G~y------------~f~-----------------p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h 437 (475)
T KOG0615|consen 389 SLKEQILKGRY------------AFG-----------------PLQWDRISEEALDLINWMLVVDPENRPSADEALNH 437 (475)
T ss_pred cHHHHHhcCcc------------ccc-----------------ChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence 11111111111 110 01134557788999999999999999999999864
No 10
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.1e-46 Score=373.08 Aligned_cols=264 Identities=28% Similarity=0.445 Sum_probs=215.6
Q ss_pred CCCccCccccccceeEEEEEEcCC---CCeeEEEEEEeeccCcc-chHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHD---DHETLVAVKVLNLQHRG-ASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~---~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
+....+.||+|+||+||+|+...- +....||||.++..... ...+|++|++++..++|||||+++|.|...+
T Consensus 487 ~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~---- 562 (774)
T KOG1026|consen 487 DIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGD---- 562 (774)
T ss_pred heeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCC----
Confidence 345668899999999999986422 34578999999877665 5679999999999999999999999986544
Q ss_pred ceeeEEeecccCCCHHHHHhhcCC----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRD----------APRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDG 305 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~----------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~ 305 (484)
..++|+|||..|||.+||..... .+.+++..+.+.||.|||.|+.||- ++.+|||||..+|+||.+
T Consensus 563 -P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs---~~~FVHRDLATRNCLVge 638 (774)
T KOG1026|consen 563 -PLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLS---SHHFVHRDLATRNCLVGE 638 (774)
T ss_pred -eeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCcccccchhhhhceecc
Confidence 88999999999999999974321 1344899999999999999999999 999999999999999999
Q ss_pred CCceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCC
Q 011508 306 ELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGN 384 (484)
Q Consensus 306 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~ 384 (484)
+..|||+|||+++..-..+..... ....-..+|||||.+..+++|.+||||||||+|||+++ |+.||.+..+++
T Consensus 639 ~l~VKIsDfGLsRdiYssDYYk~~-----~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~E 713 (774)
T KOG1026|consen 639 NLVVKISDFGLSRDIYSSDYYKVR-----GNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQE 713 (774)
T ss_pred ceEEEecccccchhhhhhhhhccc-----CCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHH
Confidence 999999999999876443322111 12235789999999999999999999999999999999 999998754331
Q ss_pred ccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHH
Q 011508 385 LTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLL 464 (484)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 464 (484)
..+ .+-+..+. ..++.|+.++..||+.||+.+|++||+++||-..|+
T Consensus 714 --VIe-----------~i~~g~lL--------------------~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~ 760 (774)
T KOG1026|consen 714 --VIE-----------CIRAGQLL--------------------SCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQ 760 (774)
T ss_pred --HHH-----------HHHcCCcc--------------------cCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHH
Confidence 111 11111111 116789999999999999999999999999999998
Q ss_pred HHHHH
Q 011508 465 SFRNK 469 (484)
Q Consensus 465 ~i~~~ 469 (484)
..-+.
T Consensus 761 ~~~~~ 765 (774)
T KOG1026|consen 761 AWAQA 765 (774)
T ss_pred HHHhc
Confidence 87554
No 11
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=8.9e-46 Score=325.48 Aligned_cols=277 Identities=20% Similarity=0.301 Sum_probs=203.9
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCcc--chHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCc
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRG--ASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
+.|+...++|+|+||.||+++ ++.+|+.||||++.....+ ..+-.++|+++|++++|+|+|.++.+ |....
T Consensus 2 ekYE~LgkvGEGSYGvV~KCr--nk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEV-----Frrkr 74 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCR--NKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEV-----FRRKR 74 (396)
T ss_pred cHHhhhhccccCcceEEEEec--cCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHH-----HHhcc
Confidence 457788899999999999998 6678999999999654332 23457899999999999999999999 55666
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCc
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGL 316 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 316 (484)
..++|+|||+. ++.+-|.. .+..++...+.+++.|++.|+.|+| +++++||||||+|||++.++.+||||||+
T Consensus 75 klhLVFE~~dh-TvL~eLe~---~p~G~~~~~vk~~l~Q~l~ai~~cH---k~n~IHRDIKPENILit~~gvvKLCDFGF 147 (396)
T KOG0593|consen 75 KLHLVFEYCDH-TVLHELER---YPNGVPSELVKKYLYQLLKAIHFCH---KNNCIHRDIKPENILITQNGVVKLCDFGF 147 (396)
T ss_pred eeEEEeeecch-HHHHHHHh---ccCCCCHHHHHHHHHHHHHHhhhhh---hcCeecccCChhheEEecCCcEEeccchh
Confidence 89999999965 55555543 3456889999999999999999999 99999999999999999999999999999
Q ss_pred ccccccccccCCCCccccccccccccccCccccCC-CCCCcccceehhhHHHHHHHhCCCCCCCCccCCc--cHhHHHHh
Q 011508 317 AKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNL--TLHNFVKE 393 (484)
Q Consensus 317 a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~--~~~~~~~~ 393 (484)
|+.+... ....+..+.|.+|+|||.+.+ .+|+...||||+||++.||++|.+.|.+..+-+. .+......
T Consensus 148 AR~L~~p-------gd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~ 220 (396)
T KOG0593|consen 148 ARTLSAP-------GDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGN 220 (396)
T ss_pred hHhhcCC-------cchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcc
Confidence 9987532 233445678999999999877 7899999999999999999999999876432111 11111222
Q ss_pred hcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 394 ALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 394 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
..|.. ..+....-.. .+..-....+ ...-.........-+++++..|++.||++|++-+|++.
T Consensus 221 L~prh-q~iF~~N~~F---~Gv~lP~~~~-~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 221 LIPRH-QSIFSSNPFF---HGVRLPEPEH-PEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred cCHHH-HHHhccCCce---eeeecCCCCC-ccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 22222 2222111000 0000000000 00000112233557899999999999999999999984
No 12
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-45 Score=334.72 Aligned_cols=244 Identities=30% Similarity=0.385 Sum_probs=200.3
Q ss_pred hcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccC
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQ 233 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 233 (484)
..++|++.+.||+|+||+||.++. .++++.+|+|++++.. ....+....|..+|.+++||.||+++.. |+
T Consensus 23 ~~~dF~~lkviGkG~fGkV~~Vrk--~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ys-----FQ 95 (357)
T KOG0598|consen 23 GPDDFEILKVIGKGSFGKVFQVRK--KDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYS-----FQ 95 (357)
T ss_pred ChhheeeeeeeeccCCceEEEEEE--cccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEe-----cc
Confidence 346789999999999999999994 4678999999998653 3445778899999999999999999877 77
Q ss_pred CCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcc
Q 011508 234 GNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSD 313 (484)
Q Consensus 234 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~D 313 (484)
+....|+|+||+.||.|..+|+.. ..+++..+.-++..|+.||.||| +++||||||||+|||||++|+++|+|
T Consensus 96 t~~kLylVld~~~GGeLf~hL~~e----g~F~E~~arfYlaEi~lAL~~LH---~~gIiyRDlKPENILLd~~GHi~LtD 168 (357)
T KOG0598|consen 96 TEEKLYLVLDYLNGGELFYHLQRE----GRFSEDRARFYLAEIVLALGYLH---SKGIIYRDLKPENILLDEQGHIKLTD 168 (357)
T ss_pred cCCeEEEEEeccCCccHHHHHHhc----CCcchhHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHeeecCCCcEEEec
Confidence 788999999999999999999843 35889999999999999999999 99999999999999999999999999
Q ss_pred cCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHh
Q 011508 314 FGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKE 393 (484)
Q Consensus 314 fg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 393 (484)
||+++..-.. .......+||+.|||||++.+..|+..+|.||+|+++|||++|.+||... +..++...
T Consensus 169 FgL~k~~~~~-------~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~-----~~~~~~~~ 236 (357)
T KOG0598|consen 169 FGLCKEDLKD-------GDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAE-----DVKKMYDK 236 (357)
T ss_pred cccchhcccC-------CCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCc-----cHHHHHHH
Confidence 9999854222 23334578999999999999999999999999999999999999999763 22222222
Q ss_pred hcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCC
Q 011508 394 ALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERM 454 (484)
Q Consensus 394 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP 454 (484)
....+ +... +.-...+..+++...+..||++|-
T Consensus 237 I~~~k--------~~~~--------------------p~~ls~~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 237 ILKGK--------LPLP--------------------PGYLSEEARDLLKKLLKRDPRQRL 269 (357)
T ss_pred HhcCc--------CCCC--------------------CccCCHHHHHHHHHHhccCHHHhc
Confidence 22111 0000 011145678899999999999996
No 13
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-45 Score=347.84 Aligned_cols=260 Identities=26% Similarity=0.372 Sum_probs=211.5
Q ss_pred HHhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcC-CCCCceeEeeeeeee
Q 011508 155 FKATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSI-RHRNLVKIITSCVSV 230 (484)
Q Consensus 155 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 230 (484)
.+...+|.+++.||+|+|++|++|+ +..+++.||||++.+.. ....+-...|-.+|.+| .||.|++++..
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~--~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~T---- 142 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAR--EKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFT---- 142 (604)
T ss_pred cCChhhcchhheeccccceeEEEee--ecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEE----
Confidence 3455789999999999999999999 55578999999997542 22334567888999999 89999999977
Q ss_pred ccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceE
Q 011508 231 DFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAH 310 (484)
Q Consensus 231 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~k 310 (484)
|+++..+|+|+||+++|+|.++|+... .+++.....++.+|+.||+||| ++|||||||||+|||||+|+++|
T Consensus 143 -FQD~~sLYFvLe~A~nGdll~~i~K~G----sfde~caR~YAAeIldAleylH---~~GIIHRDlKPENILLd~dmhik 214 (604)
T KOG0592|consen 143 -FQDEESLYFVLEYAPNGDLLDLIKKYG----SFDETCARFYAAEILDALEYLH---SNGIIHRDLKPENILLDKDGHIK 214 (604)
T ss_pred -eecccceEEEEEecCCCcHHHHHHHhC----cchHHHHHHHHHHHHHHHHHHH---hcCceeccCChhheeEcCCCcEE
Confidence 677779999999999999999998654 4899999999999999999999 99999999999999999999999
Q ss_pred EcccCcccccccccccC----CCCcccc--ccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCC
Q 011508 311 VSDFGLAKFLPEAANNL----SSNQSSS--VGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGN 384 (484)
Q Consensus 311 l~Dfg~a~~~~~~~~~~----~~~~~~~--~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~ 384 (484)
|+|||.|+.++...... ....... ..++||..|.+||++.....++.+|||+|||+||+|+.|++||....+ -
T Consensus 215 ITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ne-y 293 (604)
T KOG0592|consen 215 ITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANE-Y 293 (604)
T ss_pred EeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccH-H
Confidence 99999999997655431 1112222 558999999999999999999999999999999999999999976311 1
Q ss_pred ccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 385 LTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
.. +..+++-.... +++.+..+.+|+.+.|..||.+|+|.+||-+.
T Consensus 294 li------------FqkI~~l~y~f---------------------p~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H 338 (604)
T KOG0592|consen 294 LI------------FQKIQALDYEF---------------------PEGFPEDARDLIKKLLVRDPSDRLTSQQIKAH 338 (604)
T ss_pred HH------------HHHHHHhcccC---------------------CCCCCHHHHHHHHHHHccCccccccHHHHhhC
Confidence 11 11222211111 23335678899999999999999999888765
No 14
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-45 Score=337.40 Aligned_cols=261 Identities=30% Similarity=0.408 Sum_probs=202.1
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCcee
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFE 238 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 238 (484)
.++...+.||+|+||+||++... .++...|||.+........+.+.+|+.+|++++|||||+.+|...... +..+
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~--~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~---~~~~ 91 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNK--KTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRE---NDEY 91 (313)
T ss_pred chhhhhccccCccceEEEEEEec--CCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCcccccc---Ceee
Confidence 45677899999999999999954 347889999987664333567899999999999999999999632211 1368
Q ss_pred eEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecC-CCceEEcccCcc
Q 011508 239 ALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDG-ELTAHVSDFGLA 317 (484)
Q Consensus 239 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~-~~~~kl~Dfg~a 317 (484)
+++|||+++|+|.+++..... .+++..+..+.+||++||+||| +++|+||||||+|||++. ++.+||+|||++
T Consensus 92 ~i~mEy~~~GsL~~~~~~~g~---~l~E~~v~~ytr~iL~GL~ylH---s~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a 165 (313)
T KOG0198|consen 92 NIFMEYAPGGSLSDLIKRYGG---KLPEPLVRRYTRQILEGLAYLH---SKGIVHCDIKPANILLDPSNGDVKLADFGLA 165 (313)
T ss_pred EeeeeccCCCcHHHHHHHcCC---CCCHHHHHHHHHHHHHHHHHHH---hCCEeccCcccceEEEeCCCCeEEeccCccc
Confidence 899999999999999986542 5999999999999999999999 999999999999999999 799999999999
Q ss_pred cccccccccCCCCccccccccccccccCccccCCC-CCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcc
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGS-EVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALP 396 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 396 (484)
+...... ..........||+.|||||++..+ ....++||||+||++.||+||+.||.... ....+.-....
T Consensus 166 ~~~~~~~----~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~----~~~~~~~~ig~ 237 (313)
T KOG0198|consen 166 KKLESKG----TKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFF----EEAEALLLIGR 237 (313)
T ss_pred ccccccc----ccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhc----chHHHHHHHhc
Confidence 8765311 112223346799999999999854 33459999999999999999999997630 11111110000
Q ss_pred hhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHH
Q 011508 397 ERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLS 465 (484)
Q Consensus 397 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 465 (484)
.. .-|.+ +...+.+..+++..|+..||++|||+.|+++.--.
T Consensus 238 ~~----~~P~i-----------------------p~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~ 279 (313)
T KOG0198|consen 238 ED----SLPEI-----------------------PDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFL 279 (313)
T ss_pred cC----CCCCC-----------------------CcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhh
Confidence 00 00000 22235678899999999999999999999986543
No 15
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-44 Score=332.27 Aligned_cols=267 Identities=25% Similarity=0.343 Sum_probs=209.1
Q ss_pred hcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccc-hHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGA-SKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
..+.|++.+.||.|..++||+|+. ...+..||||++..+.... .+.+.+|+..|+.++||||++++..|. .+
T Consensus 24 n~~~YeL~e~IG~G~sa~V~~A~c--~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFv-----v~ 96 (516)
T KOG0582|consen 24 NAKDYELQEVIGVGASAVVYLARC--IPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFV-----VD 96 (516)
T ss_pred CccceeEEEEEeccceeEeeeeee--cccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEE-----ec
Confidence 346799999999999999999994 4456899999998765443 478999999999999999999998854 44
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
...|+||+||.+||+.+.++.... ..+++..+..|++++++||.||| .+|.||||||+.||||+++|.+||+|||
T Consensus 97 ~~LWvVmpfMa~GS~ldIik~~~~--~Gl~E~~Ia~iLre~LkaL~YLH---~~G~IHRdvKAgnILi~~dG~VkLadFg 171 (516)
T KOG0582|consen 97 SELWVVMPFMAGGSLLDIIKTYYP--DGLEEASIATILREVLKALDYLH---QNGHIHRDVKAGNILIDSDGTVKLADFG 171 (516)
T ss_pred ceeEEeehhhcCCcHHHHHHHHcc--ccccHHHHHHHHHHHHHHHHHHH---hcCceecccccccEEEcCCCcEEEcCce
Confidence 589999999999999999986653 44999999999999999999999 9999999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCC--CCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHh
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG--SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKE 393 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 393 (484)
.+..+.... ...........||+.|||||++.. ..|+.|+||||||++..||.+|..||.....-...+... ..
T Consensus 172 vsa~l~~~G---~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tL-qn 247 (516)
T KOG0582|consen 172 VSASLFDSG---DRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTL-QN 247 (516)
T ss_pred eeeeecccC---ceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHh-cC
Confidence 987775543 111112256789999999999543 469999999999999999999999998754332222211 11
Q ss_pred hcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 394 ALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 394 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
..|.......|.. + .......+.+++..||+.||++|||++++++.
T Consensus 248 ~pp~~~t~~~~~d------~-----------------~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh 293 (516)
T KOG0582|consen 248 DPPTLLTSGLDKD------E-----------------DKKFSKSFREMIALCLVKDPSKRPTASKLLKH 293 (516)
T ss_pred CCCCcccccCChH------H-----------------hhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence 1110000000000 0 11224578899999999999999999999853
No 16
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=4e-44 Score=348.49 Aligned_cols=268 Identities=24% Similarity=0.378 Sum_probs=205.2
Q ss_pred hcCCCCccCccccccceeEEEEEEc---CCCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcC-CCCCceeEeeeeeeec
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFD---HDDHETLVAVKVLNLQHR-GASKSFIAECQALRSI-RHRNLVKIITSCVSVD 231 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~---~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~ 231 (484)
..++|++.+.||+|+||.||+|... ....+..||+|+++.... .....+.+|+.++.++ +||||++++++|.
T Consensus 5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~--- 81 (338)
T cd05102 5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACT--- 81 (338)
T ss_pred chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEec---
Confidence 3467899999999999999999752 223456899999875432 2345788999999999 8999999999873
Q ss_pred cCCCceeeEEeecccCCCHHHHHhhcCCC---------------------------------------------------
Q 011508 232 FQGNDFEALVYELMVNGSLEEWLHLNRDA--------------------------------------------------- 260 (484)
Q Consensus 232 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~--------------------------------------------------- 260 (484)
..+...++||||+++|+|.+++......
T Consensus 82 -~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (338)
T cd05102 82 -KPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPP 160 (338)
T ss_pred -CCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccc
Confidence 3344678999999999999999753210
Q ss_pred -------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcccccccccccCCCCccc
Q 011508 261 -------PRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFLPEAANNLSSNQSS 333 (484)
Q Consensus 261 -------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~ 333 (484)
...+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++........ ..
T Consensus 161 ~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~-----~~ 232 (338)
T cd05102 161 QETDDLWKSPLTMEDLICYSFQVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY-----VR 232 (338)
T ss_pred hhccccccCCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCccceEEEcCCCcEEEeecccccccccCcch-----hc
Confidence 134788899999999999999999 899999999999999999999999999999865322111 11
Q ss_pred cccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhhcchhhhhhcCcccccccc
Q 011508 334 SVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVERE 412 (484)
Q Consensus 334 ~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 412 (484)
.....++..|+|||++.+..++.++|||||||++|||++ |..||....... .+... +.+.....
T Consensus 233 ~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~-~~~~~-----------~~~~~~~~--- 297 (338)
T cd05102 233 KGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE-EFCQR-----------LKDGTRMR--- 297 (338)
T ss_pred ccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH-HHHHH-----------HhcCCCCC---
Confidence 112345678999999998899999999999999999997 999997532211 00000 00000000
Q ss_pred cccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHH
Q 011508 413 EGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRN 468 (484)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~ 468 (484)
.+..++..+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 298 -----------------~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 298 -----------------APENATPEIYRIMLACWQGDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred -----------------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 012235678999999999999999999999999998754
No 17
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-45 Score=348.10 Aligned_cols=270 Identities=27% Similarity=0.409 Sum_probs=211.4
Q ss_pred cHHhHHHhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCCCCceeEeeee
Q 011508 150 SYQNLFKATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIRHRNLVKIITSC 227 (484)
Q Consensus 150 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~ 227 (484)
+.+++....+.+.+...||+|.||+||+|+|. ..||||+++.... ...+.|.+|+..+++-+|.||+-+.|+|
T Consensus 383 s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh-----GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~ 457 (678)
T KOG0193|consen 383 SLEEWEIPPEEVLLGERIGSGSFGTVYRGRWH-----GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGAC 457 (678)
T ss_pred cccccccCHHHhhccceeccccccceeecccc-----cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhh
Confidence 33455555566778899999999999999986 3499999987654 3457899999999999999999999997
Q ss_pred eeeccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCC
Q 011508 228 VSVDFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGEL 307 (484)
Q Consensus 228 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~ 307 (484)
.... . .||+.+|+|-+|..+++..+ ..++..+.+.|+.||++|+.||| .++|||||||..||++.+++
T Consensus 458 ~~p~-----~-AIiTqwCeGsSLY~hlHv~e---tkfdm~~~idIAqQiaqGM~YLH---AK~IIHrDLKSnNIFl~~~~ 525 (678)
T KOG0193|consen 458 MNPP-----L-AIITQWCEGSSLYTHLHVQE---TKFDMNTTIDIAQQIAQGMDYLH---AKNIIHRDLKSNNIFLHEDL 525 (678)
T ss_pred cCCc-----e-eeeehhccCchhhhhccchh---hhhhHHHHHHHHHHHHHhhhhhh---hhhhhhhhccccceEEccCC
Confidence 5332 3 99999999999999998543 45899999999999999999999 99999999999999999999
Q ss_pred ceEEcccCcccccccccccCCCCccccccccccccccCccccCC---CCCCcccceehhhHHHHHHHhCCCCCCCCccCC
Q 011508 308 TAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG---SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGN 384 (484)
Q Consensus 308 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~---~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~ 384 (484)
.|||+|||++..-..-. .........|...|||||++.. .+|++.+||||||+|+|||+||..||.....+.
T Consensus 526 kVkIgDFGLatvk~~w~-----g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dq 600 (678)
T KOG0193|consen 526 KVKIGDFGLATVKTRWS-----GEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQ 600 (678)
T ss_pred cEEEecccceeeeeeec-----cccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhh
Confidence 99999999987543221 1111122347889999998764 579999999999999999999999997322221
Q ss_pred ccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHH
Q 011508 385 LTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLL 464 (484)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 464 (484)
..+ ..-+. .+.+.+ ......|+.++.+|+..||..++++||.+.+|+..|+
T Consensus 601 Iif-mVGrG--------~l~pd~--------------------s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~ 651 (678)
T KOG0193|consen 601 IIF-MVGRG--------YLMPDL--------------------SKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLE 651 (678)
T ss_pred eEE-Eeccc--------ccCccc--------------------hhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHH
Confidence 110 00000 000000 0113456889999999999999999999999999999
Q ss_pred HHHHHH
Q 011508 465 SFRNKL 470 (484)
Q Consensus 465 ~i~~~~ 470 (484)
++..++
T Consensus 652 ~l~~~~ 657 (678)
T KOG0193|consen 652 ELLPSL 657 (678)
T ss_pred Hhhhcc
Confidence 887754
No 18
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.2e-44 Score=337.30 Aligned_cols=280 Identities=26% Similarity=0.287 Sum_probs=205.2
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC--ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCc
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH--RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
+.|+.+++||+|.||.||+|+ +..+++.||+|++..+. .+...-..+||.+|++|+||||+++.+...+. ...
T Consensus 117 ~~feki~kIGeGTyg~VYkAr--~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~---~~~ 191 (560)
T KOG0600|consen 117 DSFEKIEKIGEGTYGQVYKAR--DLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSK---LSG 191 (560)
T ss_pred HHHHHHHHhcCcchhheeEee--ecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEec---CCc
Confidence 457778999999999999999 66788999999998665 44556678999999999999999999986543 245
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCc
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGL 316 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 316 (484)
.+|+|+|||+ -+|.-++.. ..-.+++.++..+++|++.||+|+| .++|+|||||.+|||||.+|.+||+|||+
T Consensus 192 siYlVFeYMd-hDL~GLl~~---p~vkft~~qIKc~mkQLl~Gl~~cH---~~gvlHRDIK~SNiLidn~G~LKiaDFGL 264 (560)
T KOG0600|consen 192 SIYLVFEYMD-HDLSGLLSS---PGVKFTEPQIKCYMKQLLEGLEYCH---SRGVLHRDIKGSNILIDNNGVLKIADFGL 264 (560)
T ss_pred eEEEEEeccc-chhhhhhcC---CCcccChHHHHHHHHHHHHHHHHHh---hcCeeeccccccceEEcCCCCEEeccccc
Confidence 7899999995 488888762 2346999999999999999999999 99999999999999999999999999999
Q ss_pred ccccccccccCCCCccccccccccccccCccccCC-CCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhc
Q 011508 317 AKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEAL 395 (484)
Q Consensus 317 a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 395 (484)
|+++..... ...+..+-|.+|+|||++.+ ..|+.+.|+||.||||.||++|++.|.+... -..++...+..-
T Consensus 265 Ar~y~~~~~------~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tE-veQl~kIfklcG 337 (560)
T KOG0600|consen 265 ARFYTPSGS------APYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTE-VEQLHKIFKLCG 337 (560)
T ss_pred eeeccCCCC------cccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccH-HHHHHHHHHHhC
Confidence 998755432 22345678999999998877 5799999999999999999999999876321 111222222111
Q ss_pred chhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 396 PERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 396 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
.+....+--..+........ ........++. ....+...++|+..+|..||.+|.|+.++++
T Consensus 338 SP~e~~W~~~kLP~~~~~kp---~~~y~r~l~E~-~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 338 SPTEDYWPVSKLPHATIFKP---QQPYKRRLRET-FKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred CCChhccccccCCcccccCC---CCcccchHHHH-hccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 11100000000100000000 00000000000 1223566789999999999999999999875
No 19
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-45 Score=341.78 Aligned_cols=269 Identities=22% Similarity=0.309 Sum_probs=204.8
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchH-HHHHHHHHHHcCC-CCCceeEeeeeeeeccCCC
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASK-SFIAECQALRSIR-HRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~-~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~ 235 (484)
.++|.+.++||.|.||.||+|+ ...++..||||.++.......+ .-.+|+..|++|+ |||||++.+.+ .++
T Consensus 9 m~RY~~i~klGDGTfGsV~la~--~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi-----~d~ 81 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAK--SKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVI-----RDN 81 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEee--ecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHh-----hcc
Confidence 4678999999999999999999 5556788999999865543322 3468999999998 99999999985 333
Q ss_pred c-eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEccc
Q 011508 236 D-FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDF 314 (484)
Q Consensus 236 ~-~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 314 (484)
+ ..++||||| ..+|.++++.. .+.+++..+..|+.||++||+|+| .+|+.|||+||+|||+..+..+||+||
T Consensus 82 ~~~L~fVfE~M-d~NLYqLmK~R---~r~fse~~irnim~QilqGL~hiH---k~GfFHRDlKPENiLi~~~~~iKiaDF 154 (538)
T KOG0661|consen 82 DRILYFVFEFM-DCNLYQLMKDR---NRLFSESDIRNIMYQILQGLAHIH---KHGFFHRDLKPENILISGNDVIKIADF 154 (538)
T ss_pred CceEeeeHHhh-hhhHHHHHhhc---CCcCCHHHHHHHHHHHHHHHHHHH---hcCcccccCChhheEecccceeEeccc
Confidence 3 899999999 67999999854 567999999999999999999999 999999999999999999999999999
Q ss_pred CcccccccccccCCCCccccccccccccccCccccC-CCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHh
Q 011508 315 GLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGM-GSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKE 393 (484)
Q Consensus 315 g~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 393 (484)
|+|+.... .+..+..+.|.+|+|||++. .+.|+.+.|+||+|||++|+.+-++.|.+..+-+ .+.+.. +
T Consensus 155 GLARev~S--------kpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~D-qi~KIc-~ 224 (538)
T KOG0661|consen 155 GLAREVRS--------KPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEID-QIYKIC-E 224 (538)
T ss_pred cccccccc--------CCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHH-HHHHHH-H
Confidence 99997632 33445678999999999754 5789999999999999999999999987643211 111111 1
Q ss_pred hc--------ch--hhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 394 AL--------PE--RLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 394 ~~--------~~--~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
.+ ++ .+...+.-.+..-. . .......+. +..+.++++.+|+++||.+|||+.|.++.
T Consensus 225 VLGtP~~~~~~eg~~La~~mnf~~P~~~--------~---~~l~~L~p~-~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 225 VLGTPDKDSWPEGYNLASAMNFRFPQVK--------P---SPLKDLLPN-ASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred HhCCCccccchhHHHHHHHhccCCCcCC--------C---CChHHhCcc-cCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 11 00 01111111110000 0 000111122 57889999999999999999999999864
No 20
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-44 Score=309.54 Aligned_cols=278 Identities=19% Similarity=0.239 Sum_probs=222.1
Q ss_pred HhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 156 KATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 156 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
...++|++.+.||+|||+-||.++ +-.++..+|+|++......+.+..++|++..++++|||++++++++....-...
T Consensus 18 In~~Ryri~~~LgeGGfsfv~LV~--~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~ 95 (302)
T KOG2345|consen 18 INNKRYRIQRLLGEGGFSFVDLVK--GLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGK 95 (302)
T ss_pred EcCceEEEeeeecCCCceeeeeec--ccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCc
Confidence 345789999999999999999998 555788999999988877778889999999999999999999999877655566
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
...|++++|...|||.+.+......+..+++.+++.|+.++++||++||.. ..+++||||||.||++++++.++|.|||
T Consensus 96 ~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~G 174 (302)
T KOG2345|consen 96 HEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLG 174 (302)
T ss_pred eeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEecc
Confidence 789999999999999999998777777899999999999999999999943 3459999999999999999999999999
Q ss_pred cccccccccccCCCC--ccccccccccccccCccccC---CCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHH
Q 011508 316 LAKFLPEAANNLSSN--QSSSVGVKGTVGYAAPEYGM---GSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNF 390 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~--~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~ 390 (484)
.+...+-...+.... ...+.....|..|+|||.+. +...++++|||||||+||+|+.|..||+.....+.++.--
T Consensus 175 S~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLA 254 (302)
T KOG2345|consen 175 SATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALA 254 (302)
T ss_pred CccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEe
Confidence 998764432211111 11122345789999999865 3467899999999999999999999998755443332211
Q ss_pred HHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHH
Q 011508 391 VKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSF 466 (484)
Q Consensus 391 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i 466 (484)
+....+..- . ....+..+.+++..|++.||.+||++.+++..++.+
T Consensus 255 -----------v~n~q~s~P-~------------------~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 255 -----------VQNAQISIP-N------------------SSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred -----------eeccccccC-C------------------CCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence 111111110 0 011266789999999999999999999999998765
No 21
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-44 Score=342.27 Aligned_cols=251 Identities=24% Similarity=0.329 Sum_probs=208.6
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCcee
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFE 238 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 238 (484)
..|....+||+|+.|.||.|. ...++..||||++........+-+.+|+.+|+..+|+|||.+++.+... +..
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~--~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~-----deL 345 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVAR--KISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVG-----DEL 345 (550)
T ss_pred hhhcchhhhccccccceeeee--eccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhccc-----cee
Confidence 457778899999999999998 5556778999999988777777889999999999999999999986543 589
Q ss_pred eEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccc
Q 011508 239 ALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAK 318 (484)
Q Consensus 239 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~ 318 (484)
|+|||||++|+|.+.+.... +++.++..|++++++||+||| .++|+|||||.+|||++.++.+||+|||++.
T Consensus 346 WVVMEym~ggsLTDvVt~~~-----~~E~qIA~Icre~l~aL~fLH---~~gIiHrDIKSDnILL~~~g~vKltDFGFca 417 (550)
T KOG0578|consen 346 WVVMEYMEGGSLTDVVTKTR-----MTEGQIAAICREILQGLKFLH---ARGIIHRDIKSDNILLTMDGSVKLTDFGFCA 417 (550)
T ss_pred EEEEeecCCCchhhhhhccc-----ccHHHHHHHHHHHHHHHHHHH---hcceeeeccccceeEeccCCcEEEeeeeeee
Confidence 99999999999999987443 899999999999999999999 9999999999999999999999999999998
Q ss_pred ccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchh
Q 011508 319 FLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPER 398 (484)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 398 (484)
.+.... ......+||+.|||||+.....|++|.||||||++++||+-|++||-.. ..+.....
T Consensus 418 qi~~~~-------~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE----~PlrAlyL------ 480 (550)
T KOG0578|consen 418 QISEEQ-------SKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNE----NPLRALYL------ 480 (550)
T ss_pred cccccc-------CccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCC----ChHHHHHH------
Confidence 775433 3445578999999999999999999999999999999999999998531 11111110
Q ss_pred hhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 399 LAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 399 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
+..--.+.+.. ++.....+.+++.+||+.||.+||++.|+++.
T Consensus 481 Ia~ng~P~lk~---------------------~~klS~~~kdFL~~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 481 IATNGTPKLKN---------------------PEKLSPELKDFLDRCLVVDVEQRASAKELLEH 523 (550)
T ss_pred HhhcCCCCcCC---------------------ccccCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence 11111111111 23346789999999999999999999999864
No 22
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=1e-43 Score=307.28 Aligned_cols=277 Identities=21% Similarity=0.266 Sum_probs=205.7
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC--ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCc
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH--RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
++|...+.||+|.||.||+|+ +..+++.||||+++... .+......+|++.|+.++|+||+.++++ |...+
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~--d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~-----F~~~~ 74 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKAR--DTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDV-----FPHKS 74 (318)
T ss_pred chhhhhhhhcCcceEEEEEEE--ecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhh-----ccCCC
Confidence 467888999999999999999 66788999999998654 2334678899999999999999999999 55666
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCc
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGL 316 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 316 (484)
...+|+||| ..+|+..++. ....++..++..++.++++|++|+| .+.|+||||||.|+|++++|.+||+|||+
T Consensus 75 ~l~lVfEfm-~tdLe~vIkd---~~i~l~pa~iK~y~~m~LkGl~y~H---~~~IlHRDlKPnNLLis~~g~lKiADFGL 147 (318)
T KOG0659|consen 75 NLSLVFEFM-PTDLEVVIKD---KNIILSPADIKSYMLMTLKGLAYCH---SKWILHRDLKPNNLLISSDGQLKIADFGL 147 (318)
T ss_pred ceEEEEEec-cccHHHHhcc---cccccCHHHHHHHHHHHHHHHHHHH---hhhhhcccCCccceEEcCCCcEEeecccc
Confidence 889999999 5699999973 3456899999999999999999999 99999999999999999999999999999
Q ss_pred ccccccccccCCCCccccccccccccccCccccCC-CCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhc
Q 011508 317 AKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEAL 395 (484)
Q Consensus 317 a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 395 (484)
|+.+.... ......+-|..|+|||.+.+ ..|+...|+||.||++.||+-|.+-|.+..+ -..+....+..-
T Consensus 148 Ar~f~~p~-------~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sD-idQL~~If~~LG 219 (318)
T KOG0659|consen 148 ARFFGSPN-------RIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSD-IDQLSKIFRALG 219 (318)
T ss_pred hhccCCCC-------cccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCch-HHHHHHHHHHcC
Confidence 99875432 22223368999999998877 5799999999999999999999877655321 111222222111
Q ss_pred chhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 396 PERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 396 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
.+...++-+-.-..++.+-. .......+.....+....++++..++..||.+|+|+.|++++
T Consensus 220 TP~~~~WP~~~~lpdY~~~~-----~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 220 TPTPDQWPEMTSLPDYVKIQ-----QFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred CCCcccCccccccccHHHHh-----cCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 11111111111111110000 000000110122345667999999999999999999999865
No 23
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-44 Score=340.66 Aligned_cols=256 Identities=25% Similarity=0.393 Sum_probs=210.5
Q ss_pred hccccHHhHHHhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEee
Q 011508 146 VLRVSYQNLFKATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIIT 225 (484)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~ 225 (484)
...++|+++ ...+-||.|+.|.||+|++. ++.||||+++.. -..+++-|++|+|+||+.+.|
T Consensus 118 ~WeiPFe~I-------sELeWlGSGaQGAVF~Grl~----netVAVKKV~el-------kETdIKHLRkLkH~NII~FkG 179 (904)
T KOG4721|consen 118 LWEIPFEEI-------SELEWLGSGAQGAVFLGRLH----NETVAVKKVREL-------KETDIKHLRKLKHPNIITFKG 179 (904)
T ss_pred hccCCHHHh-------hhhhhhccCcccceeeeecc----CceehhHHHhhh-------hhhhHHHHHhccCcceeeEee
Confidence 456667666 33567999999999999986 567999987522 235788899999999999999
Q ss_pred eeeeeccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecC
Q 011508 226 SCVSVDFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDG 305 (484)
Q Consensus 226 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~ 305 (484)
+|.... .+|||||||..|-|.+.|+. .+.++......|..+||.|+.||| .+.|||||||.-||||+.
T Consensus 180 VCtqsP-----cyCIiMEfCa~GqL~~VLka----~~~itp~llv~Wsk~IA~GM~YLH---~hKIIHRDLKSPNiLIs~ 247 (904)
T KOG4721|consen 180 VCTQSP-----CYCIIMEFCAQGQLYEVLKA----GRPITPSLLVDWSKGIAGGMNYLH---LHKIIHRDLKSPNILISY 247 (904)
T ss_pred eecCCc-----eeEEeeeccccccHHHHHhc----cCccCHHHHHHHHHHhhhhhHHHH---HhhHhhhccCCCceEeec
Confidence 996544 88999999999999999983 445888888999999999999999 999999999999999999
Q ss_pred CCceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCc
Q 011508 306 ELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNL 385 (484)
Q Consensus 306 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~ 385 (484)
+..+||+|||.++...+ ......++||..|||||++...+.++|.||||||||||||+||..||.+.....+
T Consensus 248 ~d~VKIsDFGTS~e~~~--------~STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAI 319 (904)
T KOG4721|consen 248 DDVVKISDFGTSKELSD--------KSTKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAI 319 (904)
T ss_pred cceEEeccccchHhhhh--------hhhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhee
Confidence 99999999999987633 2344567899999999999999999999999999999999999999976432211
Q ss_pred cHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHH
Q 011508 386 TLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLS 465 (484)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 465 (484)
+..+-...+ .-..+..|+..+.-|++.||+..|..||++.+++..|+.
T Consensus 320 -------------IwGVGsNsL-------------------~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldI 367 (904)
T KOG4721|consen 320 -------------IWGVGSNSL-------------------HLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDI 367 (904)
T ss_pred -------------EEeccCCcc-------------------cccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhh
Confidence 011111111 112267789999999999999999999999999999987
Q ss_pred HHHHHh
Q 011508 466 FRNKLV 471 (484)
Q Consensus 466 i~~~~~ 471 (484)
....+.
T Consensus 368 a~pell 373 (904)
T KOG4721|consen 368 ASPELL 373 (904)
T ss_pred cCHHHh
Confidence 766553
No 24
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.8e-44 Score=366.90 Aligned_cols=280 Identities=27% Similarity=0.427 Sum_probs=222.4
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCC---eeEEEEEEeeccC-ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccC
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDH---ETLVAVKVLNLQH-RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQ 233 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~---~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 233 (484)
....++.+.||+|.||.||.|.+.+... ...||+|.++... .+...+|.+|..+|+.++|||||+++|.|..
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~---- 766 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLD---- 766 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecC----
Confidence 3455677899999999999999876543 3459999887654 3455789999999999999999999999965
Q ss_pred CCceeeEEeecccCCCHHHHHhhcCC---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceE
Q 011508 234 GNDFEALVYELMVNGSLEEWLHLNRD---APRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAH 310 (484)
Q Consensus 234 ~~~~~~lv~e~~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~k 310 (484)
....+|++|||++|+|..||++.+. ....++..+.+.++.|||+|+.||+ ++++|||||.++|+||++...+|
T Consensus 767 -~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe---~~~fvHRDLAaRNCLL~~~r~VK 842 (1025)
T KOG1095|consen 767 -SGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLE---SKHFVHRDLAARNCLLDERRVVK 842 (1025)
T ss_pred -CCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHH---hCCCcCcchhhhheeecccCcEE
Confidence 3377999999999999999986532 2456999999999999999999999 99999999999999999999999
Q ss_pred EcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhH
Q 011508 311 VSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHN 389 (484)
Q Consensus 311 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~ 389 (484)
|+|||+|+.+.......... ...-...|||||.+..+.++.|+|||||||+|||++| |..||....+.+. +..
T Consensus 843 IaDFGlArDiy~~~yyr~~~-----~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v-~~~ 916 (1025)
T KOG1095|consen 843 IADFGLARDIYDKDYYRKHG-----EAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEV-LLD 916 (1025)
T ss_pred EcccchhHhhhhchheeccC-----ccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHH-HHH
Confidence 99999999553332221111 1234578999999999999999999999999999999 9999876422211 111
Q ss_pred HHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHHH
Q 011508 390 FVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRNK 469 (484)
Q Consensus 390 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~ 469 (484)
+... . +-..+..|+..+.++|..||+.+|++||++..+++++..+.+.
T Consensus 917 ~~~g-----------g---------------------RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~ 964 (1025)
T KOG1095|consen 917 VLEG-----------G---------------------RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNA 964 (1025)
T ss_pred HHhC-----------C---------------------ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhh
Confidence 1110 0 1122678899999999999999999999999999999999877
Q ss_pred HhhccCC-Ccceeec
Q 011508 470 LVKNVRG-QPATYVT 483 (484)
Q Consensus 470 ~~~~~~~-~~~~~~~ 483 (484)
......+ .++.|.+
T Consensus 965 ~~~~~~~~~~a~~~~ 979 (1025)
T KOG1095|consen 965 ALGTIYGPLPADYES 979 (1025)
T ss_pred hccCcccccccccCc
Confidence 6544333 3555543
No 25
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-43 Score=337.75 Aligned_cols=257 Identities=25% Similarity=0.342 Sum_probs=204.4
Q ss_pred HhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeecc----Cc-cchHHHHHHHHHHHcCC-CCCceeEeeeeee
Q 011508 156 KATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQ----HR-GASKSFIAECQALRSIR-HRNLVKIITSCVS 229 (484)
Q Consensus 156 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~----~~-~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~ 229 (484)
...++|.+.+.||+|+||+|+.|.. ..++..||+|++... .. ...+.+.+|+.++++++ ||||++++.++
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~--~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~-- 89 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKH--RLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVF-- 89 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeee--ccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEE--
Confidence 4457899999999999999999984 445689999977653 12 23456778999999998 99999999995
Q ss_pred eccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCC-Cc
Q 011508 230 VDFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGE-LT 308 (484)
Q Consensus 230 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~-~~ 308 (484)
......++||||+.+|+|.+++.. ..++.+.....++.|++.|++|+| +++|+||||||+|||++.+ ++
T Consensus 90 ---~t~~~~~ivmEy~~gGdL~~~i~~----~g~l~E~~ar~~F~Qlisav~y~H---~~gi~HRDLK~ENilld~~~~~ 159 (370)
T KOG0583|consen 90 ---ATPTKIYIVMEYCSGGDLFDYIVN----KGRLKEDEARKYFRQLISAVAYCH---SRGIVHRDLKPENILLDGNEGN 159 (370)
T ss_pred ---ecCCeEEEEEEecCCccHHHHHHH----cCCCChHHHHHHHHHHHHHHHHHH---hCCEeeCCCCHHHEEecCCCCC
Confidence 444479999999999999999985 345888999999999999999999 9999999999999999999 99
Q ss_pred eEEcccCcccccccccccCCCCccccccccccccccCccccCCCC-CC-cccceehhhHHHHHHHhCCCCCCCCccCCcc
Q 011508 309 AHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSE-VS-TSGDVYSFGILLLEMFTGKGPTNEMFTGNLT 386 (484)
Q Consensus 309 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~-~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~ 386 (484)
+||+|||++..... ........+||+.|+|||++.+.. |+ .++||||+||+||.|++|+.||++. .
T Consensus 160 ~Kl~DFG~s~~~~~-------~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~-----~ 227 (370)
T KOG0583|consen 160 LKLSDFGLSAISPG-------EDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDS-----N 227 (370)
T ss_pred EEEeccccccccCC-------CCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCc-----c
Confidence 99999999987631 122334568999999999999877 75 7899999999999999999999872 1
Q ss_pred HhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHH-HHHHHhHhhccCCCCcCCCCCHHHHHHHHHH
Q 011508 387 LHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKEC-LVSVLGIGVICSSELPRERMNMEEVAAQLLS 465 (484)
Q Consensus 387 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 465 (484)
....... +....+. .+..+ ..++..++.+|+..||.+|+|+.||+ .-.-
T Consensus 228 ~~~l~~k--------i~~~~~~---------------------~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~-~h~w 277 (370)
T KOG0583|consen 228 VPNLYRK--------IRKGEFK---------------------IPSYLLSPEARSLIEKMLVPDPSTRITLLEIL-EHPW 277 (370)
T ss_pred HHHHHHH--------HhcCCcc---------------------CCCCcCCHHHHHHHHHHcCCCcccCCCHHHHh-hChh
Confidence 1111111 1111000 02222 45678999999999999999999999 4444
Q ss_pred HHH
Q 011508 466 FRN 468 (484)
Q Consensus 466 i~~ 468 (484)
++.
T Consensus 278 ~~~ 280 (370)
T KOG0583|consen 278 FQK 280 (370)
T ss_pred hcc
Confidence 443
No 26
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.2e-43 Score=321.41 Aligned_cols=287 Identities=25% Similarity=0.291 Sum_probs=208.3
Q ss_pred CCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCceee
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFEA 239 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 239 (484)
.|...+++|.|+||.||+|..... +..||||+...+.+. -.+|+++|+.++|||||+++-++....-.+.-+..
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~--~~~vAIKKv~~d~r~----knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~ln 98 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRET--EEEVAIKKVLQDKRY----KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLN 98 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCC--CceeEEEEecCCCCc----CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHH
Confidence 456678999999999999997643 688999988654332 24699999999999999999887765433234667
Q ss_pred EEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCC-CceEEcccCccc
Q 011508 240 LVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGE-LTAHVSDFGLAK 318 (484)
Q Consensus 240 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~-~~~kl~Dfg~a~ 318 (484)
+|||||+. +|.++++........++...+.-+..||.+||+||| +.+|+||||||+|+|+|.+ |.+||||||.|+
T Consensus 99 lVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh---~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK 174 (364)
T KOG0658|consen 99 LVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLH---SHGICHRDIKPQNLLVDPDTGVLKICDFGSAK 174 (364)
T ss_pred HHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHH---hcCcccCCCChheEEEcCCCCeEEeccCCcce
Confidence 99999965 899999876666677888899999999999999999 8999999999999999987 899999999999
Q ss_pred ccccccccCCCCccccccccccccccCccccCC-CCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcch
Q 011508 319 FLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPE 397 (484)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 397 (484)
.+.... .......|..|+|||.+.+ ..|+.+.||||.|||+.||+-|++-|.+. .+...+...++-.-.+
T Consensus 175 ~L~~~e--------pniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~-s~~dQL~eIik~lG~P 245 (364)
T KOG0658|consen 175 VLVKGE--------PNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGD-SSVDQLVEIIKVLGTP 245 (364)
T ss_pred eeccCC--------CceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCC-CHHHHHHHHHHHhCCC
Confidence 885433 2244568899999998877 57999999999999999999999999873 2222233333322211
Q ss_pred hhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH--HHHHHHH
Q 011508 398 RLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ--LLSFRNK 469 (484)
Q Consensus 398 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~--L~~i~~~ 469 (484)
...++-.-... +.+........+ ...+ +.......+.++++.++++.+|.+|.++.|++.. ..+++..
T Consensus 246 t~e~I~~mn~~--y~~~~~p~ik~~-~~~~-~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~~ 315 (364)
T KOG0658|consen 246 TREDIKSMNPN--YTEFKFPQIKAH-PWHK-VFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRDP 315 (364)
T ss_pred CHHHHhhcCcc--cccccCcccccc-ccee-ecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhCc
Confidence 11111110000 000000000000 0000 1123346788999999999999999999999853 4555443
No 27
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-44 Score=350.85 Aligned_cols=261 Identities=25% Similarity=0.428 Sum_probs=215.0
Q ss_pred CCCccCccccccceeEEEEEEcCCC-CeeEEEEEEeeccCcc-chHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHDD-HETLVAVKVLNLQHRG-ASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
...+.++||.|.||.||+|+++... ....||||.++....+ ...+|+.|..||.+++||||+++.|+ ......
T Consensus 630 ~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGV-----VTks~P 704 (996)
T KOG0196|consen 630 CVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGV-----VTKSKP 704 (996)
T ss_pred heEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEE-----EecCce
Confidence 3467889999999999999986432 3568999999976543 34689999999999999999999998 445568
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
.+||+|||++|+|+.||+.+. ..+++.+...++++|+.|++||- +.++|||||.++|||++.+..+|++|||++
T Consensus 705 vMIiTEyMENGsLDsFLR~~D---GqftviQLVgMLrGIAsGMkYLs---dm~YVHRDLAARNILVNsnLvCKVsDFGLS 778 (996)
T KOG0196|consen 705 VMIITEYMENGSLDSFLRQND---GQFTVIQLVGMLRGIASGMKYLS---DMNYVHRDLAARNILVNSNLVCKVSDFGLS 778 (996)
T ss_pred eEEEhhhhhCCcHHHHHhhcC---CceEeehHHHHHHHHHHHhHHHh---hcCchhhhhhhhheeeccceEEEeccccce
Confidence 899999999999999998655 34999999999999999999999 899999999999999999999999999999
Q ss_pred cccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhhcc
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEALP 396 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 396 (484)
+.+.++. .......+..-..+|.|||.+..++++.+|||||||+||||.++ |..||-++.+. +..+-+.+
T Consensus 779 Rvledd~----~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQ--dVIkaIe~--- 849 (996)
T KOG0196|consen 779 RVLEDDP----EAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ--DVIKAIEQ--- 849 (996)
T ss_pred eecccCC----CccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchH--HHHHHHHh---
Confidence 9885543 11222223345688999999999999999999999999999988 99998765332 11111110
Q ss_pred hhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHH
Q 011508 397 ERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRN 468 (484)
Q Consensus 397 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~ 468 (484)
..+-..+.+|+..|.+||+.||+.|-.+||++.||+..|.++..
T Consensus 850 ----------------------------gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIr 893 (996)
T KOG0196|consen 850 ----------------------------GYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIR 893 (996)
T ss_pred ----------------------------ccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhc
Confidence 11122278899999999999999999999999999999988753
No 28
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=4.6e-43 Score=331.62 Aligned_cols=248 Identities=31% Similarity=0.452 Sum_probs=205.9
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCcc--chHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCc
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRG--ASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
++|.+.+.||+|+||.||||+ .+.+...||+|.+.+..+. ..+.+.+|+++++.++||||+.++++ |+...
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgr--rK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~es-----fEt~~ 74 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGR--RKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLES-----FETSA 74 (808)
T ss_pred cchhHHHHhcCCccceeeecc--cccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHh-----hcccc
Confidence 578888999999999999998 5567899999999765543 34678999999999999999999998 66777
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCc
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGL 316 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 316 (484)
+.|+|.||+.| +|..++... ..+++..+..|+.++..||.||| +.+|.|||+||.|||++.++.+|++|||+
T Consensus 75 ~~~vVte~a~g-~L~~il~~d----~~lpEe~v~~~a~~LVsaL~yLh---s~rilhrd~kPqniLl~~~~~~KlcdFg~ 146 (808)
T KOG0597|consen 75 HLWVVTEYAVG-DLFTILEQD----GKLPEEQVRAIAYDLVSALYYLH---SNRILHRDMKPQNILLEKGGTLKLCDFGL 146 (808)
T ss_pred eEEEEehhhhh-hHHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHH---hcCcccccCCcceeeecCCCceeechhhh
Confidence 99999999965 999999744 35999999999999999999999 99999999999999999999999999999
Q ss_pred ccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcc
Q 011508 317 AKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALP 396 (484)
Q Consensus 317 a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 396 (484)
|+.+.. .........||+.|||||+..+.+|+..+|.||+||++||+++|++||... .+.+.++....
T Consensus 147 Ar~m~~-------~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~-----si~~Lv~~I~~ 214 (808)
T KOG0597|consen 147 ARAMST-------NTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYAR-----SITQLVKSILK 214 (808)
T ss_pred hhhccc-------CceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHH-----HHHHHHHHHhc
Confidence 997643 233445578999999999999999999999999999999999999999642 22222222211
Q ss_pred hhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 397 ERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 397 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
+. ... +......+..++...+..||.+|.|..+++..
T Consensus 215 d~-------v~~----------------------p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~H 251 (808)
T KOG0597|consen 215 DP-------VKP----------------------PSTASSSFVNFLQGLLIKDPAQRLTWTDLLGH 251 (808)
T ss_pred CC-------CCC----------------------cccccHHHHHHHHHHhhcChhhcccHHHHhcC
Confidence 11 000 11225668889999999999999999998753
No 29
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-43 Score=318.74 Aligned_cols=287 Identities=24% Similarity=0.297 Sum_probs=211.1
Q ss_pred HHHhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEee--ccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeec
Q 011508 154 LFKATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLN--LQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVD 231 (484)
Q Consensus 154 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~--~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 231 (484)
.+.....|...+.||+|+||.|+.|+ ++.++..||||++. .......++..+|+++|+.++|+||+.+++......
T Consensus 17 ~~~i~~~y~~~~~iG~GAyGvVcsA~--~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~ 94 (359)
T KOG0660|consen 17 LFEIPRYYVLIEPIGRGAYGVVCSAK--DKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPS 94 (359)
T ss_pred EEeccceecccccccCcceeeEEEEE--EcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccc
Confidence 34455667778999999999999999 55567999999987 344455678899999999999999999999876644
Q ss_pred cCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEE
Q 011508 232 FQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHV 311 (484)
Q Consensus 232 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl 311 (484)
...-...|+|+|+| +.+|.+.++.. +.++...+..+.+|+++||+|+| +.+|+||||||+|++++.+...||
T Consensus 95 ~~~f~DvYiV~elM-etDL~~iik~~----~~L~d~H~q~f~YQiLrgLKyiH---SAnViHRDLKPsNll~n~~c~lKI 166 (359)
T KOG0660|consen 95 RDKFNDVYLVFELM-ETDLHQIIKSQ----QDLTDDHAQYFLYQILRGLKYIH---SANVIHRDLKPSNLLLNADCDLKI 166 (359)
T ss_pred ccccceeEEehhHH-hhHHHHHHHcC----ccccHHHHHHHHHHHHHhcchhh---cccccccccchhheeeccCCCEEe
Confidence 44556789999999 77999999743 34899999999999999999999 999999999999999999999999
Q ss_pred cccCcccccccccccCCCCccccccccccccccCccccC-CCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHH
Q 011508 312 SDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGM-GSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNF 390 (484)
Q Consensus 312 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~ 390 (484)
+|||+|+..+.. ......+..+.|.+|+|||++. ...|+...||||.||++.||++|++.|.+.. .....+.
T Consensus 167 ~DFGLAR~~~~~-----~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d--~v~Ql~l 239 (359)
T KOG0660|consen 167 CDFGLARYLDKF-----FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKD--YVHQLQL 239 (359)
T ss_pred ccccceeecccc-----CcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCc--hHHHHHH
Confidence 999999987543 1223335577899999999754 4689999999999999999999999987632 1112222
Q ss_pred HHhhcch---h-hhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 391 VKEALPE---R-LAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 391 ~~~~~~~---~-~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
+....+. . +..+-............. ....+... . ........++|+.+||..||.+|+|++|+++.
T Consensus 240 I~~~lGtP~~e~l~~i~s~~ar~yi~slp~---~p~~~f~~-~-fp~a~p~AidLlekmL~fdP~kRita~eAL~h 310 (359)
T KOG0660|consen 240 ILELLGTPSEEDLQKIRSEKARPYIKSLPQ---IPKQPFSS-I-FPNANPLAIDLLEKMLVFDPKKRITAEEALAH 310 (359)
T ss_pred HHHhcCCCCHHHHHHhccHHHHHHHHhCCC---CCCCCHHH-H-cCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 2222111 1 111111110000000000 00000000 0 11335678999999999999999999999864
No 30
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=1.1e-41 Score=322.44 Aligned_cols=251 Identities=24% Similarity=0.316 Sum_probs=198.3
Q ss_pred CccccccceeEEEEEEcCCCCeeEEEEEEeeccCccc---hHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCceeeEE
Q 011508 165 NLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGA---SKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFEALV 241 (484)
Q Consensus 165 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 241 (484)
..||+|+++.||+|.+. ++.||||.++...... .+.+.+|+.+|++++||||+++++++.... ......++|
T Consensus 26 ~~i~~g~~~~v~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~-~~~~~~~lv 100 (283)
T PHA02988 26 VLIKENDQNSIYKGIFN----NKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIV-DDLPRLSLI 100 (283)
T ss_pred eEEeeCCceEEEEEEEC----CEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecc-cCCCceEEE
Confidence 67999999999999863 6789999997654333 467789999999999999999999875421 233467899
Q ss_pred eecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcccccc
Q 011508 242 YELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFLP 321 (484)
Q Consensus 242 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~~ 321 (484)
|||+++|+|.+++... ..+++...+.++.|++.||+|||+ ..+++||||||+||++++++.+||+|||+++...
T Consensus 101 ~Ey~~~g~L~~~l~~~----~~~~~~~~~~i~~~i~~~l~~lH~--~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~ 174 (283)
T PHA02988 101 LEYCTRGYLREVLDKE----KDLSFKTKLDMAIDCCKGLYNLYK--YTNKPYKNLTSVSFLVTENYKLKIICHGLEKILS 174 (283)
T ss_pred EEeCCCCcHHHHHhhC----CCCChhHHHHHHHHHHHHHHHHHh--cCCCCCCcCChhhEEECCCCcEEEcccchHhhhc
Confidence 9999999999999743 358899999999999999999993 2488899999999999999999999999988653
Q ss_pred cccccCCCCccccccccccccccCccccCC--CCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchhh
Q 011508 322 EAANNLSSNQSSSVGVKGTVGYAAPEYGMG--SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPERL 399 (484)
Q Consensus 322 ~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 399 (484)
... ....++..|+|||++.+ ..++.++|||||||++|||++|+.||..... .+.........
T Consensus 175 ~~~----------~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~-----~~~~~~i~~~~- 238 (283)
T PHA02988 175 SPP----------FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTT-----KEIYDLIINKN- 238 (283)
T ss_pred ccc----------ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCH-----HHHHHHHHhcC-
Confidence 211 12357889999999876 6899999999999999999999999975321 11111100000
Q ss_pred hhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHH
Q 011508 400 AEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRN 468 (484)
Q Consensus 400 ~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~ 468 (484)
.... .+..|+.++.+++.+||+.||++|||++|+++.|+.+..
T Consensus 239 ---~~~~-----------------------~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~ 281 (283)
T PHA02988 239 ---NSLK-----------------------LPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF 281 (283)
T ss_pred ---CCCC-----------------------CCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence 0000 012346789999999999999999999999999998753
No 31
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.1e-42 Score=335.37 Aligned_cols=250 Identities=23% Similarity=0.305 Sum_probs=207.0
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCC
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQG 234 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 234 (484)
.+.|.+++.||.|+.|.|-.|+ +..+|+.+|||++.+.. ......+.+|+-+|+-+.|||++++++. +++
T Consensus 11 iGpwkLgkTLG~Gstg~vrlak--h~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydV-----we~ 83 (786)
T KOG0588|consen 11 IGPWKLGKTLGKGSTGCVRLAK--HAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDV-----WEN 83 (786)
T ss_pred ccceeccccccCCCCceehhhh--cccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeee-----ecc
Confidence 3678999999999999999998 77789999999997552 2223568899999999999999999998 677
Q ss_pred CceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEccc
Q 011508 235 NDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDF 314 (484)
Q Consensus 235 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 314 (484)
+.++|+|.||+++|-|.+++-.. +++++.+..+++.||+.|+.|+| ..+|+||||||+|+|||..+++||+||
T Consensus 84 ~~~lylvlEyv~gGELFdylv~k----G~l~e~eaa~ff~QIi~gv~yCH---~~~icHRDLKpENlLLd~~~nIKIADF 156 (786)
T KOG0588|consen 84 KQHLYLVLEYVPGGELFDYLVRK----GPLPEREAAHFFRQILDGVSYCH---AFNICHRDLKPENLLLDVKNNIKIADF 156 (786)
T ss_pred CceEEEEEEecCCchhHHHHHhh----CCCCCHHHHHHHHHHHHHHHHHh---hhcceeccCCchhhhhhcccCEeeecc
Confidence 88999999999999999999743 45899999999999999999999 889999999999999999999999999
Q ss_pred CcccccccccccCCCCccccccccccccccCccccCCCCC-CcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHh
Q 011508 315 GLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEV-STSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKE 393 (484)
Q Consensus 315 g~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 393 (484)
|+|..-.+ ...-...+|++.|.|||++.+.+| +.++||||+|||||.|+||+.||++. .+......
T Consensus 157 GMAsLe~~--------gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDd-----Nir~LLlK 223 (786)
T KOG0588|consen 157 GMASLEVP--------GKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDD-----NIRVLLLK 223 (786)
T ss_pred ceeecccC--------CccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCc-----cHHHHHHH
Confidence 99976422 233445689999999999999988 57999999999999999999999852 22222211
Q ss_pred hcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHH
Q 011508 394 ALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQL 463 (484)
Q Consensus 394 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 463 (484)
... +.+ ..+...+.+..+|+.+|+..||.+|.|++||++.-
T Consensus 224 V~~------------G~f-----------------~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP 264 (786)
T KOG0588|consen 224 VQR------------GVF-----------------EMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHP 264 (786)
T ss_pred HHc------------Ccc-----------------cCCCcCCHHHHHHHHHHhccCccccccHHHHhhCc
Confidence 110 000 00223366788999999999999999999998763
No 32
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-42 Score=334.86 Aligned_cols=269 Identities=27% Similarity=0.379 Sum_probs=212.3
Q ss_pred HhHHHhcCCCCccCccccccceeEEEEEEcCCCC--eeEEEEEEeeccC---ccchHHHHHHHHHHHcCCCCCceeEeee
Q 011508 152 QNLFKATDGFSLENLIGAGSFGSVYKGIFDHDDH--ETLVAVKVLNLQH---RGASKSFIAECQALRSIRHRNLVKIITS 226 (484)
Q Consensus 152 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~--~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~ 226 (484)
+.++...++..+.++||+|+||.||+|++..... ...||||..+... .....++.+|.++|++++|||||+++|+
T Consensus 150 ~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGV 229 (474)
T KOG0194|consen 150 QKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGV 229 (474)
T ss_pred cccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEE
Confidence 3334445556777999999999999999876543 2238999988522 4455789999999999999999999999
Q ss_pred eeeeccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCC
Q 011508 227 CVSVDFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGE 306 (484)
Q Consensus 227 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~ 306 (484)
+.. ...+++|||+|.||+|.++|+.... .++..+++.++.+.|.||+||| +++++||||.++|+|++.+
T Consensus 230 a~~-----~~Pl~ivmEl~~gGsL~~~L~k~~~---~v~~~ek~~~~~~AA~Gl~YLh---~k~~IHRDIAARNcL~~~~ 298 (474)
T KOG0194|consen 230 AVL-----EEPLMLVMELCNGGSLDDYLKKNKK---SLPTLEKLRFCYDAARGLEYLH---SKNCIHRDIAARNCLYSKK 298 (474)
T ss_pred EcC-----CCccEEEEEecCCCcHHHHHHhCCC---CCCHHHHHHHHHHHHhHHHHHH---HCCCcchhHhHHHheecCC
Confidence 654 3488999999999999999986543 5999999999999999999999 9999999999999999999
Q ss_pred CceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCc
Q 011508 307 LTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNL 385 (484)
Q Consensus 307 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~ 385 (484)
+.+||+|||+++...... .......-+..|+|||.+....++.++|||||||++||+++ |..||.+....
T Consensus 299 ~~vKISDFGLs~~~~~~~-------~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~-- 369 (474)
T KOG0194|consen 299 GVVKISDFGLSRAGSQYV-------MKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY-- 369 (474)
T ss_pred CeEEeCccccccCCccee-------eccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH--
Confidence 999999999987653111 00001135688999999999999999999999999999999 88898774222
Q ss_pred cHhHHH-HhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHH
Q 011508 386 TLHNFV-KEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLL 464 (484)
Q Consensus 386 ~~~~~~-~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 464 (484)
....++ ...++.. .+...+..+..++..||..+|++||||.++.+.|+
T Consensus 370 ~v~~kI~~~~~r~~-------------------------------~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~ 418 (474)
T KOG0194|consen 370 EVKAKIVKNGYRMP-------------------------------IPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLE 418 (474)
T ss_pred HHHHHHHhcCccCC-------------------------------CCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHH
Confidence 111111 1111000 01223677888999999999999999999999999
Q ss_pred HHHHHHh
Q 011508 465 SFRNKLV 471 (484)
Q Consensus 465 ~i~~~~~ 471 (484)
.+.....
T Consensus 419 ~~~~~~~ 425 (474)
T KOG0194|consen 419 ALEKKKE 425 (474)
T ss_pred HHHhccc
Confidence 9987654
No 33
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=6.8e-42 Score=327.79 Aligned_cols=267 Identities=24% Similarity=0.369 Sum_probs=200.2
Q ss_pred CCCCccCccccccceeEEEEEEcCC--------------CCeeEEEEEEeeccCcc-chHHHHHHHHHHHcCCCCCceeE
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHD--------------DHETLVAVKVLNLQHRG-ASKSFIAECQALRSIRHRNLVKI 223 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~--------------~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~ 223 (484)
++|.+.+.||+|+||.||+|.+... ..+..||+|++...... ....+.+|++++.+++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 5788899999999999999986432 23457999998754332 34578999999999999999999
Q ss_pred eeeeeeeccCCCceeeEEeecccCCCHHHHHhhcCC---------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCC
Q 011508 224 ITSCVSVDFQGNDFEALVYELMVNGSLEEWLHLNRD---------------APRNLNLLQRLSIAVDVASTLEYLHHYCE 288 (484)
Q Consensus 224 ~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~---------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~ 288 (484)
++++.. .+..++||||+++|+|.+++..... ....+++..++.++.||+.||+||| +
T Consensus 85 ~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~ 156 (304)
T cd05096 85 LGVCVD-----EDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLS---S 156 (304)
T ss_pred EEEEec-----CCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH---H
Confidence 998643 3478999999999999999864321 1134788899999999999999999 8
Q ss_pred CCeeecCCCCCCeeecCCCceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHH
Q 011508 289 TPIVHCDLKPSNVLLDGELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLL 368 (484)
Q Consensus 289 ~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ 368 (484)
.+|+||||||+||+++.++.+||+|||+++....... ........++..|+|||++....++.++||||||+++|
T Consensus 157 ~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~ 231 (304)
T cd05096 157 LNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDY-----YRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLW 231 (304)
T ss_pred CCccccCcchhheEEcCCccEEECCCccceecccCce-----eEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHH
Confidence 9999999999999999999999999999876532211 01112234578899999998888999999999999999
Q ss_pred HHHh--CCCCCCCCccCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccC
Q 011508 369 EMFT--GKGPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICS 446 (484)
Q Consensus 369 ellt--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl 446 (484)
||++ +..||...... .....+............ ...+..|+..+.+++.+||
T Consensus 232 el~~~~~~~p~~~~~~~--~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~li~~cl 285 (304)
T cd05096 232 EILMLCKEQPYGELTDE--QVIENAGEFFRDQGRQVY------------------------LFRPPPCPQGLYELMLQCW 285 (304)
T ss_pred HHHHccCCCCCCcCCHH--HHHHHHHHHhhhcccccc------------------------ccCCCCCCHHHHHHHHHHc
Confidence 9987 56677653211 111111111100000000 0002234678999999999
Q ss_pred CCCcCCCCCHHHHHHHHH
Q 011508 447 SELPRERMNMEEVAAQLL 464 (484)
Q Consensus 447 ~~dP~~RPt~~evl~~L~ 464 (484)
+.||++|||+.||.+.|+
T Consensus 286 ~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 286 SRDCRERPSFSDIHAFLT 303 (304)
T ss_pred cCCchhCcCHHHHHHHHh
Confidence 999999999999998876
No 34
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-43 Score=326.57 Aligned_cols=251 Identities=25% Similarity=0.351 Sum_probs=204.7
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCc
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
...|+..+.||+|+||.||+|. +..+++.||+|++..... ...+++++|+.+|.+++++||.++|+.+... .
T Consensus 12 ~~~~~~~~~IgrGsfG~Vyk~~--d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g-----~ 84 (467)
T KOG0201|consen 12 ELLYTKLELIGRGSFGEVYKAI--DNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKG-----T 84 (467)
T ss_pred ccccccchhccccccceeeeee--eccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeec-----c
Confidence 3457777999999999999999 666789999999987654 3457889999999999999999999986543 3
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCc
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGL 316 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 316 (484)
..+++||||.||++.+.++. ...+++..+.-|+++++.|+.||| .++.+|||||+.|||+..+|.+||+|||.
T Consensus 85 ~LwiiMey~~gGsv~~lL~~----~~~~~E~~i~~ilre~l~~l~ylH---~~~kiHrDIKaanil~s~~g~vkl~DfgV 157 (467)
T KOG0201|consen 85 KLWIIMEYCGGGSVLDLLKS----GNILDEFEIAVILREVLKGLDYLH---SEKKIHRDIKAANILLSESGDVKLADFGV 157 (467)
T ss_pred cHHHHHHHhcCcchhhhhcc----CCCCccceeeeehHHHHHHhhhhh---hcceecccccccceeEeccCcEEEEecce
Confidence 88999999999999999973 233578888889999999999999 99999999999999999999999999999
Q ss_pred ccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcc
Q 011508 317 AKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALP 396 (484)
Q Consensus 317 a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 396 (484)
+..+.... .....++||+.|||||++....|+.|+||||||++.+||.+|.+|+.....-... ..++
T Consensus 158 a~ql~~~~-------~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvl------flIp 224 (467)
T KOG0201|consen 158 AGQLTNTV-------KRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVL------FLIP 224 (467)
T ss_pred eeeeechh-------hccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEE------Eecc
Confidence 98764432 2335678999999999999889999999999999999999999998764331100 0001
Q ss_pred hhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 397 ERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 397 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
.. --|.+ ...+...+.+++..||+.||+.||++.++++.
T Consensus 225 k~----~PP~L-----------------------~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 225 KS----APPRL-----------------------DGDFSPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred CC----CCCcc-----------------------ccccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 00 00111 11336678999999999999999999999853
No 35
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=7.5e-42 Score=336.09 Aligned_cols=262 Identities=25% Similarity=0.376 Sum_probs=201.2
Q ss_pred CCCCccCccccccceeEEEEEEc---CCCCeeEEEEEEeeccC-ccchHHHHHHHHHHHcC-CCCCceeEeeeeeeeccC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFD---HDDHETLVAVKVLNLQH-RGASKSFIAECQALRSI-RHRNLVKIITSCVSVDFQ 233 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~---~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 233 (484)
++|++.+.||+|+||.||+|++. ...++..||||+++... ....+.+.+|+.++..+ +||||++++++|.
T Consensus 35 ~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~----- 109 (375)
T cd05104 35 NRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACT----- 109 (375)
T ss_pred HHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeec-----
Confidence 46888999999999999999752 23456789999987443 23345788999999999 8999999999864
Q ss_pred CCceeeEEeecccCCCHHHHHhhcCC------------------------------------------------------
Q 011508 234 GNDFEALVYELMVNGSLEEWLHLNRD------------------------------------------------------ 259 (484)
Q Consensus 234 ~~~~~~lv~e~~~~gsL~~~l~~~~~------------------------------------------------------ 259 (484)
.....++||||+++|+|.+++.....
T Consensus 110 ~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 189 (375)
T cd05104 110 VGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSV 189 (375)
T ss_pred cCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccc
Confidence 34478999999999999999964321
Q ss_pred -----------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccccccc
Q 011508 260 -----------------APRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFLPE 322 (484)
Q Consensus 260 -----------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~~~ 322 (484)
....+++..++.++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++....
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~ 266 (375)
T cd05104 190 RSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIRN 266 (375)
T ss_pred ccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCchhhEEEECCCcEEEecCccceeccC
Confidence 1124788999999999999999999 89999999999999999999999999999986533
Q ss_pred ccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhhcchhhhh
Q 011508 323 AANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEALPERLAE 401 (484)
Q Consensus 323 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (484)
.... .......++..|+|||.+.+..++.++|||||||++|||++ |..||....... ...+.+...
T Consensus 267 ~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~-~~~~~~~~~------- 333 (375)
T cd05104 267 DSNY-----VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS-KFYKMIKEG------- 333 (375)
T ss_pred cccc-----cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH-HHHHHHHhC-------
Confidence 2210 11112235678999999999999999999999999999998 888986532211 111111100
Q ss_pred hcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHH
Q 011508 402 IVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLS 465 (484)
Q Consensus 402 ~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 465 (484)
.... .+..++.++.+++..||+.||++|||+.||++.|++
T Consensus 334 -----~~~~-------------------~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 334 -----YRML-------------------SPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred -----ccCC-------------------CCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence 0000 011124578999999999999999999999999986
No 36
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=4e-42 Score=306.38 Aligned_cols=279 Identities=22% Similarity=0.258 Sum_probs=203.7
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC--ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCc
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH--RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
+.|+..+.|++|+||.||+|+ ++.+++.||+|+++... .+..-...+|+.+|.+++|||||.+-.+..... -+
T Consensus 76 ~efe~lnrI~EGtyGiVYRak--dk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~---~d 150 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAK--DKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSN---MD 150 (419)
T ss_pred HHHHHHhhcccCcceeEEEec--cCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccc---cc
Confidence 457888999999999999998 77788999999998654 334456789999999999999999988765433 44
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCc
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGL 316 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 316 (484)
..|+|||||+ -+|..++..- .+++...++..+..|+++|++||| .+.|+|||||++|+|++..|.+||+|||+
T Consensus 151 ~iy~VMe~~E-hDLksl~d~m---~q~F~~~evK~L~~QlL~glk~lH---~~wilHRDLK~SNLLm~~~G~lKiaDFGL 223 (419)
T KOG0663|consen 151 KIYIVMEYVE-HDLKSLMETM---KQPFLPGEVKTLMLQLLRGLKHLH---DNWILHRDLKTSNLLLSHKGILKIADFGL 223 (419)
T ss_pred eeeeeHHHHH-hhHHHHHHhc---cCCCchHHHHHHHHHHHHHHHHHh---hceeEecccchhheeeccCCcEEecccch
Confidence 6899999994 5899999743 357999999999999999999999 99999999999999999999999999999
Q ss_pred ccccccccccCCCCccccccccccccccCccccCC-CCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhc
Q 011508 317 AKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEAL 395 (484)
Q Consensus 317 a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 395 (484)
|+.+... .......+-|.+|+|||++.+ ..|+.+.|+||+|||+.||+++++.|.+.. +.+..+.+-...
T Consensus 224 AR~ygsp-------~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~s--E~dQl~~If~ll 294 (419)
T KOG0663|consen 224 AREYGSP-------LKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKS--EIDQLDKIFKLL 294 (419)
T ss_pred hhhhcCC-------cccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCc--hHHHHHHHHHHh
Confidence 9987443 223345678999999998776 569999999999999999999999987632 222222221111
Q ss_pred --ch-hhh-hhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 396 --PE-RLA-EIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 396 --~~-~~~-~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
|. .+. .+-..-.......... .....+.... .......-.+|+...+..||.+|.|++|.++.
T Consensus 295 GtPte~iwpg~~~lp~~k~~~f~~~-pyn~lr~kF~---~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h 361 (419)
T KOG0663|consen 295 GTPSEAIWPGYSELPAVKKMTFSEH-PYNNLRKKFG---ALSLSEQGFDLLNKLLTYDPGKRITAEDGLKH 361 (419)
T ss_pred CCCccccCCCccccchhhccccCCC-Cchhhhhhcc---ccccchhHHHHHHHHhccCccccccHHHhhcc
Confidence 11 111 1100000000000000 0000111111 11123556789999999999999999998753
No 37
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-42 Score=347.01 Aligned_cols=272 Identities=22% Similarity=0.252 Sum_probs=211.4
Q ss_pred hcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCC-CCCceeEeeeeeeeccCCC
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIR-HRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~ 235 (484)
...++++.+.|.+|||+.||.|.... .+..||+|++-..+....+...+|+++|++|+ |+|||.+++........++
T Consensus 35 g~~~v~V~~vLAEGGFa~VYla~~~~--~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~ 112 (738)
T KOG1989|consen 35 GSHRVTVEKVLAEGGFAQVYLAQDVK--GGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNN 112 (738)
T ss_pred CCEEEEEEEEEccCCcEEEEEEEecC--CCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCC
Confidence 44567888999999999999999543 34889999998777777788999999999995 9999999994333222222
Q ss_pred --ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcc
Q 011508 236 --DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSD 313 (484)
Q Consensus 236 --~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~D 313 (484)
-+.+|.||||.+|.|-+++...... .|++.++++|+.|+++|+++||.. ..+|||||||.+||||+.+++.||||
T Consensus 113 ~~~EvllLmEyC~gg~Lvd~mn~Rlq~--~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCD 189 (738)
T KOG1989|consen 113 GVWEVLLLMEYCKGGSLVDFMNTRLQT--RLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCD 189 (738)
T ss_pred ceeEEEeehhhccCCcHHHHHHHHHhc--cCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCc
Confidence 4678999999999999999865433 399999999999999999999965 77899999999999999999999999
Q ss_pred cCccccccccccc--CCCCccccccccccccccCcccc---CCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHh
Q 011508 314 FGLAKFLPEAANN--LSSNQSSSVGVKGTVGYAAPEYG---MGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLH 388 (484)
Q Consensus 314 fg~a~~~~~~~~~--~~~~~~~~~~~~g~~~y~aPE~~---~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~ 388 (484)
||.+......... .............|+.|+|||.+ .+..+++|+|||+|||+||-|+....||++...-
T Consensus 190 FGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l----- 264 (738)
T KOG1989|consen 190 FGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL----- 264 (738)
T ss_pred ccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce-----
Confidence 9998643221100 00001111234579999999964 4678999999999999999999999999864221
Q ss_pred HHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHH
Q 011508 389 NFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRN 468 (484)
Q Consensus 389 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~ 468 (484)
.|++..... +. .......+.+||+.||+.||.+||++.||++.+.++..
T Consensus 265 ------------aIlng~Y~~--------------P~-----~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~ 313 (738)
T KOG1989|consen 265 ------------AILNGNYSF--------------PP-----FPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELAN 313 (738)
T ss_pred ------------eEEeccccC--------------CC-----CccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhc
Confidence 111111111 00 12337789999999999999999999999999998875
Q ss_pred H
Q 011508 469 K 469 (484)
Q Consensus 469 ~ 469 (484)
+
T Consensus 314 ~ 314 (738)
T KOG1989|consen 314 K 314 (738)
T ss_pred C
Confidence 4
No 38
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.3e-42 Score=318.19 Aligned_cols=261 Identities=25% Similarity=0.342 Sum_probs=200.5
Q ss_pred hcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC--------------ccchHHHHHHHHHHHcCCCCCcee
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH--------------RGASKSFIAECQALRSIRHRNLVK 222 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--------------~~~~~~~~~e~~~l~~l~h~niv~ 222 (484)
.-+.|++...||+|.||.|-+|+ +..+++.||||++.+.. ....+...+|+.+|++++|||||+
T Consensus 95 ~lNqy~l~~eiG~G~yGkVkLar--~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~ 172 (576)
T KOG0585|consen 95 QLNQYELIKEIGSGQYGKVKLAR--DEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVK 172 (576)
T ss_pred ehhheehhhhhcCCccceEEEEe--ecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeE
Confidence 34689999999999999999998 66678999999996432 112257889999999999999999
Q ss_pred EeeeeeeeccCCCceeeEEeecccCCCHHHHHhhcCCCCCC-CCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCe
Q 011508 223 IITSCVSVDFQGNDFEALVYELMVNGSLEEWLHLNRDAPRN-LNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNV 301 (484)
Q Consensus 223 ~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~-l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NI 301 (484)
++.+.- -...+..|+|+|||..|.+...= .... +++.+++++++++..||+||| .++|+||||||+|+
T Consensus 173 LiEvLD---DP~s~~~YlVley~s~G~v~w~p-----~d~~els~~~Ar~ylrDvv~GLEYLH---~QgiiHRDIKPsNL 241 (576)
T KOG0585|consen 173 LIEVLD---DPESDKLYLVLEYCSKGEVKWCP-----PDKPELSEQQARKYLRDVVLGLEYLH---YQGIIHRDIKPSNL 241 (576)
T ss_pred EEEeec---CcccCceEEEEEeccCCccccCC-----CCcccccHHHHHHHHHHHHHHHHHHH---hcCeeccccchhhe
Confidence 999853 34466899999999988875421 2233 899999999999999999999 99999999999999
Q ss_pred eecCCCceEEcccCcccccccccccCCCCccccccccccccccCccccCCCC----CCcccceehhhHHHHHHHhCCCCC
Q 011508 302 LLDGELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSE----VSTSGDVYSFGILLLEMFTGKGPT 377 (484)
Q Consensus 302 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~----~~~~~Dvws~Gvvl~elltg~~p~ 377 (484)
||+++|++||+|||.+.......+ ...........||+.|+|||...++. .+.+.||||+||+||.|+.|+.||
T Consensus 242 Ll~~~g~VKIsDFGVs~~~~~~~~--~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF 319 (576)
T KOG0585|consen 242 LLSSDGTVKISDFGVSNEFPQGSD--EGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPF 319 (576)
T ss_pred EEcCCCcEEeeccceeeecccCCc--cccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCc
Confidence 999999999999999987643311 11122223467999999999876632 467899999999999999999999
Q ss_pred CCCccCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHH
Q 011508 378 NEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNME 457 (484)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ 457 (484)
.+.+. .+. ...++...+.. ++ ..+....+.+|+.++|+.||++|.+..
T Consensus 320 ~~~~~-----~~l--------~~KIvn~pL~f-P~------------------~pe~~e~~kDli~~lL~KdP~~Ri~l~ 367 (576)
T KOG0585|consen 320 FDDFE-----LEL--------FDKIVNDPLEF-PE------------------NPEINEDLKDLIKRLLEKDPEQRITLP 367 (576)
T ss_pred ccchH-----HHH--------HHHHhcCcccC-CC------------------cccccHHHHHHHHHHhhcChhheeehh
Confidence 75311 111 11222222211 00 112256788999999999999999999
Q ss_pred HHHHHHH
Q 011508 458 EVAAQLL 464 (484)
Q Consensus 458 evl~~L~ 464 (484)
+|.....
T Consensus 368 ~ik~Hpw 374 (576)
T KOG0585|consen 368 DIKLHPW 374 (576)
T ss_pred hheecce
Confidence 9876654
No 39
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=1.3e-41 Score=334.11 Aligned_cols=264 Identities=25% Similarity=0.395 Sum_probs=201.7
Q ss_pred cCCCCccCccccccceeEEEEEEcC---CCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcC-CCCCceeEeeeeeeecc
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDH---DDHETLVAVKVLNLQHR-GASKSFIAECQALRSI-RHRNLVKIITSCVSVDF 232 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~---~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 232 (484)
.++|.+.+.||+|+||.||+|+... ..+...||+|+++.... .....+.+|+++++.+ +|+||++++++|.
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~---- 112 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACT---- 112 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEec----
Confidence 3468899999999999999998532 22345799999975432 2345688999999999 8999999999864
Q ss_pred CCCceeeEEeecccCCCHHHHHhhcCC-----------------------------------------------------
Q 011508 233 QGNDFEALVYELMVNGSLEEWLHLNRD----------------------------------------------------- 259 (484)
Q Consensus 233 ~~~~~~~lv~e~~~~gsL~~~l~~~~~----------------------------------------------------- 259 (484)
.....++||||+++|+|.+++.....
T Consensus 113 -~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (374)
T cd05106 113 -HGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSS 191 (374)
T ss_pred -CCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccc
Confidence 34478999999999999999864221
Q ss_pred -------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccccccccccc
Q 011508 260 -------------APRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFLPEAANN 326 (484)
Q Consensus 260 -------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 326 (484)
....+++..+++++.||+.||+||| +++|+||||||+||++++++.+||+|||+++.......
T Consensus 192 ~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~- 267 (374)
T cd05106 192 SQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLA---SKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSN- 267 (374)
T ss_pred cccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcc-
Confidence 1134788999999999999999999 89999999999999999999999999999876532211
Q ss_pred CCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhhcchhhhhhcCc
Q 011508 327 LSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEALPERLAEIVDP 405 (484)
Q Consensus 327 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 405 (484)
........++..|+|||++.+..++.++|||||||++|||++ |+.||....... ......... ...
T Consensus 268 ----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~-~~~~~~~~~--------~~~ 334 (374)
T cd05106 268 ----YVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS-KFYKMVKRG--------YQM 334 (374)
T ss_pred ----eeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH-HHHHHHHcc--------cCc
Confidence 011112235678999999988899999999999999999997 999997532211 111111100 000
Q ss_pred ccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHH
Q 011508 406 VLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSF 466 (484)
Q Consensus 406 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i 466 (484)
.. +...+.++.+++..||+.||++|||+.+|++.|+++
T Consensus 335 ~~-----------------------~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~ 372 (374)
T cd05106 335 SR-----------------------PDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQ 372 (374)
T ss_pred cC-----------------------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 00 011145788999999999999999999999999876
No 40
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-42 Score=302.78 Aligned_cols=198 Identities=29% Similarity=0.386 Sum_probs=176.2
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc---cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR---GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
++|+..+.||.|+||.|.+++.+ .++..+|+|++++..- ...+...+|..+|+.+.||.++++++.+ .+.
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k--~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~-----~d~ 116 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREK--HSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTF-----KDN 116 (355)
T ss_pred hhhhheeeeccCccceEEEEEEc--cCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEee-----ccC
Confidence 45788899999999999999944 4678999999986643 2345678999999999999999999884 556
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
+..++||||.+||.|.++++.. +++++..+.-++.||+.||+||| +.+|++|||||+|||+|.+|.+||+|||
T Consensus 117 ~~lymvmeyv~GGElFS~Lrk~----~rF~e~~arFYAAeivlAleylH---~~~iiYRDLKPENiLlD~~G~iKitDFG 189 (355)
T KOG0616|consen 117 SNLYMVMEYVPGGELFSYLRKS----GRFSEPHARFYAAEIVLALEYLH---SLDIIYRDLKPENLLLDQNGHIKITDFG 189 (355)
T ss_pred CeEEEEEeccCCccHHHHHHhc----CCCCchhHHHHHHHHHHHHHHHH---hcCeeeccCChHHeeeccCCcEEEEecc
Confidence 6999999999999999999843 35899999999999999999999 9999999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCC
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEM 380 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~ 380 (484)
+|+... ......+||+.|+|||++....++.++|.|||||++|||+.|.+||...
T Consensus 190 FAK~v~----------~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~ 244 (355)
T KOG0616|consen 190 FAKRVS----------GRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDD 244 (355)
T ss_pred ceEEec----------CcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCC
Confidence 999763 2245678999999999999999999999999999999999999999764
No 41
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=5.7e-42 Score=323.92 Aligned_cols=211 Identities=27% Similarity=0.397 Sum_probs=179.9
Q ss_pred HhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcCCCCCceeEeeeeeeecc
Q 011508 156 KATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSIRHRNLVKIITSCVSVDF 232 (484)
Q Consensus 156 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 232 (484)
...++|++...||+|+||.||+|+ ...+|..+|+|++++.. .+..+....|-.+|...++|.||+++.. |
T Consensus 138 ~~~~DFe~Lk~IgkGAfGeVrLar--Kk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYs-----F 210 (550)
T KOG0605|consen 138 LSLDDFELLKVIGKGAFGEVRLAR--KKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYS-----F 210 (550)
T ss_pred CCcccchhheeeccccceeEEEEE--EccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEE-----e
Confidence 355789999999999999999999 55678999999998654 4556778899999999999999999988 7
Q ss_pred CCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEc
Q 011508 233 QGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVS 312 (484)
Q Consensus 233 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~ 312 (484)
++.+++||||||++||++..+|.. ...+++..+..++.+++-|+..|| ..|+|||||||+|+|||..|++||+
T Consensus 211 QD~~~LYLiMEylPGGD~mTLL~~----~~~L~e~~arfYiaE~vlAI~~iH---~~gyIHRDIKPdNlLiD~~GHiKLS 283 (550)
T KOG0605|consen 211 QDKEYLYLIMEYLPGGDMMTLLMR----KDTLTEDWARFYIAETVLAIESIH---QLGYIHRDIKPDNLLIDAKGHIKLS 283 (550)
T ss_pred cCCCeeEEEEEecCCccHHHHHHh----cCcCchHHHHHHHHHHHHHHHHHH---HcCcccccCChhheeecCCCCEeec
Confidence 788899999999999999999973 346999999999999999999999 9999999999999999999999999
Q ss_pred ccCcccccccccc------------cC----CCCcc------------------------ccccccccccccCccccCCC
Q 011508 313 DFGLAKFLPEAAN------------NL----SSNQS------------------------SSVGVKGTVGYAAPEYGMGS 352 (484)
Q Consensus 313 Dfg~a~~~~~~~~------------~~----~~~~~------------------------~~~~~~g~~~y~aPE~~~~~ 352 (484)
|||++.-+..... .. ..... .....+||+.|+|||++.+.
T Consensus 284 DFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~k 363 (550)
T KOG0605|consen 284 DFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGK 363 (550)
T ss_pred cccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcC
Confidence 9999965432110 00 00000 01235799999999999999
Q ss_pred CCCcccceehhhHHHHHHHhCCCCCCCC
Q 011508 353 EVSTSGDVYSFGILLLEMFTGKGPTNEM 380 (484)
Q Consensus 353 ~~~~~~Dvws~Gvvl~elltg~~p~~~~ 380 (484)
.|+..+|.||+|||+||||.|.+||...
T Consensus 364 gY~~~cDwWSLG~ImyEmLvGyPPF~s~ 391 (550)
T KOG0605|consen 364 GYGKECDWWSLGCIMYEMLVGYPPFCSE 391 (550)
T ss_pred CCCccccHHHHHHHHHHHHhCCCCCCCC
Confidence 9999999999999999999999999864
No 42
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=3.9e-41 Score=319.34 Aligned_cols=253 Identities=25% Similarity=0.318 Sum_probs=196.2
Q ss_pred CCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc---cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCc
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR---GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
.|+..+.||+|+||.||+|... .+++.||+|.+..... .....+.+|+.++++++|+|++++++++ ..++
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~--~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~-----~~~~ 73 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVR--ATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAY-----ETKD 73 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEe--cCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEE-----ccCC
Confidence 3677889999999999999854 3578899999875432 2234678899999999999999999885 3445
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCc
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGL 316 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 316 (484)
..++||||+++|+|.+++.... ...+++..++.++.|++.||+||| +++|+||||||+||++++++.+||+|||+
T Consensus 74 ~~~lv~e~~~~g~L~~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH---~~~iiH~dikp~Nill~~~~~~kl~Dfg~ 148 (285)
T cd05631 74 ALCLVLTIMNGGDLKFHIYNMG--NPGFDEQRAIFYAAELCCGLEDLQ---RERIVYRDLKPENILLDDRGHIRISDLGL 148 (285)
T ss_pred eEEEEEEecCCCcHHHHHHhhC--CCCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHEEECCCCCEEEeeCCC
Confidence 8899999999999998886432 235899999999999999999999 89999999999999999999999999999
Q ss_pred ccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcc
Q 011508 317 AKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALP 396 (484)
Q Consensus 317 a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 396 (484)
+....... ......|+..|+|||++.+..++.++|||||||++|||++|+.||....... ....+....
T Consensus 149 ~~~~~~~~--------~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~--~~~~~~~~~- 217 (285)
T cd05631 149 AVQIPEGE--------TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERV--KREEVDRRV- 217 (285)
T ss_pred cEEcCCCC--------eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcch--hHHHHHHHh-
Confidence 97653221 1123468999999999999999999999999999999999999997532211 000010000
Q ss_pred hhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCC-----HHHHHHH
Q 011508 397 ERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMN-----MEEVAAQ 462 (484)
Q Consensus 397 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~evl~~ 462 (484)
....... +......+.+|+.+||+.||++||+ ++|+++.
T Consensus 218 ------~~~~~~~---------------------~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 261 (285)
T cd05631 218 ------KEDQEEY---------------------SEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQH 261 (285)
T ss_pred ------hcccccC---------------------CccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence 0000000 1122557889999999999999997 7888863
No 43
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=6.6e-41 Score=317.63 Aligned_cols=272 Identities=27% Similarity=0.354 Sum_probs=203.2
Q ss_pred CccCccccccceeEEEEEEc--CCCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCcee
Q 011508 162 SLENLIGAGSFGSVYKGIFD--HDDHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFE 238 (484)
Q Consensus 162 ~~~~~lg~G~~g~Vy~~~~~--~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 238 (484)
.+.+.||+|+||+||++.+. ...++..||+|.++.... .....+.+|++++++++||||+++++++.. ......
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~~~~ 83 (283)
T cd05080 7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSE---QGGKGL 83 (283)
T ss_pred eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEec---CCCceE
Confidence 78899999999999887643 234567899999875432 234678899999999999999999998643 234467
Q ss_pred eEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccc
Q 011508 239 ALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAK 318 (484)
Q Consensus 239 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~ 318 (484)
++||||+++++|.+++... .+++.+++.++.|++.||+||| +++|+||||||+||++++++.++|+|||++.
T Consensus 84 ~lv~e~~~~~~l~~~~~~~-----~l~~~~~~~i~~~l~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~ 155 (283)
T cd05080 84 QLIMEYVPLGSLRDYLPKH-----KLNLAQLLLFAQQICEGMAYLH---SQHYIHRDLAARNVLLDNDRLVKIGDFGLAK 155 (283)
T ss_pred EEEecCCCCCCHHHHHHHc-----CCCHHHHHHHHHHHHHHHHHHH---HCCeeccccChheEEEcCCCcEEEeeccccc
Confidence 8999999999999999642 3899999999999999999999 8999999999999999999999999999998
Q ss_pred ccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhc-ch
Q 011508 319 FLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEAL-PE 397 (484)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~-~~ 397 (484)
......... .......++..|+|||......++.++||||||+++|||+||..||.................. ..
T Consensus 156 ~~~~~~~~~----~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 231 (283)
T cd05080 156 AVPEGHEYY----RVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVV 231 (283)
T ss_pred ccCCcchhh----ccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchh
Confidence 764322110 1111223566799999998888999999999999999999999998653211111000000000 00
Q ss_pred hhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHH
Q 011508 398 RLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFR 467 (484)
Q Consensus 398 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~ 467 (484)
.+.+.++..... ..+..++.++.+++..||+.+|++|||+++|++.|+++.
T Consensus 232 ~~~~~~~~~~~~-------------------~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 232 RLIELLERGMRL-------------------PCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred hhhhhhhcCCCC-------------------CCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 011111111100 002234678999999999999999999999999998874
No 44
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=1e-41 Score=324.27 Aligned_cols=246 Identities=24% Similarity=0.316 Sum_probs=196.4
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc---cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR---GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
++|++.+.||+|+||.||+|.. ..+++.||+|++..... ...+.+.+|+.++++++||||+++++++ .++
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~--~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~ 73 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRD--RISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTE-----HDQ 73 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEE--cCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhh-----ccC
Confidence 4688999999999999999984 44578899999875321 2345688999999999999999999874 455
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
...++||||+++|+|.+++... ..+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||
T Consensus 74 ~~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~NIli~~~~~~kl~Dfg 146 (291)
T cd05612 74 RFLYMLMEYVPGGELFSYLRNS----GRFSNSTGLFYASEIVCALEYLH---SKEIVYRDLKPENILLDKEGHIKLTDFG 146 (291)
T ss_pred CeEEEEEeCCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEEEecC
Confidence 6889999999999999999743 35889999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhc
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEAL 395 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 395 (484)
++...... .....|++.|+|||++.+..++.++|||||||++|||++|+.||..... ......
T Consensus 147 ~~~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~-----~~~~~~-- 209 (291)
T cd05612 147 FAKKLRDR----------TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNP-----FGIYEK-- 209 (291)
T ss_pred cchhccCC----------cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHH--
Confidence 98765321 1124589999999999988899999999999999999999999965311 111111
Q ss_pred chhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCC-----HHHHHHH
Q 011508 396 PERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMN-----MEEVAAQ 462 (484)
Q Consensus 396 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~evl~~ 462 (484)
+....... +......+.+++.+||+.||.+||+ ++|+++.
T Consensus 210 ------i~~~~~~~---------------------~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 210 ------ILAGKLEF---------------------PRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred ------HHhCCcCC---------------------CccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 11000000 1112456789999999999999995 8888765
No 45
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.5e-42 Score=312.89 Aligned_cols=248 Identities=22% Similarity=0.348 Sum_probs=205.1
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCcc---chHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRG---ASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
.+|++.+.||+|.||.|-+|+ ....++.||||.+++.... +.-.+.+|+++|+.|+||||+.++.+ |++.
T Consensus 53 HRyE~~etLGkGTYGKVk~A~--e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEV-----FENk 125 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAY--EHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEV-----FENK 125 (668)
T ss_pred hHHHHHHHhcCCcccceeehh--hccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhh-----hcCC
Confidence 578889999999999999998 5457899999999765433 33467899999999999999999998 7888
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
+...|||||..+|.|.+|+.... .+++.+...+++||..|+.|+| .++++|||||.+|||+|.++++||+|||
T Consensus 126 dKIvivMEYaS~GeLYDYiSer~----~LsErEaRhfFRQIvSAVhYCH---knrVvHRDLKLENILLD~N~NiKIADFG 198 (668)
T KOG0611|consen 126 DKIVIVMEYASGGELYDYISERG----SLSEREARHFFRQIVSAVHYCH---KNRVVHRDLKLENILLDQNNNIKIADFG 198 (668)
T ss_pred ceEEEEEEecCCccHHHHHHHhc----cccHHHHHHHHHHHHHHHHHHh---hccceecccchhheeecCCCCeeeeccc
Confidence 89999999999999999998543 5999999999999999999999 9999999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCCCCC-CcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhh
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEV-STSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEA 394 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 394 (484)
++..+... .....++|++-|.+||+..+.+| ++..|-||+||+||.|+.|.-||++. +....+++.
T Consensus 199 LSNly~~~--------kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~-----Dhk~lvrQI 265 (668)
T KOG0611|consen 199 LSNLYADK--------KFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGR-----DHKRLVRQI 265 (668)
T ss_pred hhhhhccc--------cHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCc-----hHHHHHHHh
Confidence 99876332 23446789999999999999888 67999999999999999999999873 112222211
Q ss_pred cchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHH
Q 011508 395 LPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQL 463 (484)
Q Consensus 395 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 463 (484)
... .+.+ .+-+....-||++||..+|++|.|+++|....
T Consensus 266 s~G------------aYrE------------------P~~PSdA~gLIRwmLmVNP~RRATieDiAsHW 304 (668)
T KOG0611|consen 266 SRG------------AYRE------------------PETPSDASGLIRWMLMVNPERRATIEDIASHW 304 (668)
T ss_pred hcc------------cccC------------------CCCCchHHHHHHHHHhcCcccchhHHHHhhhh
Confidence 110 0000 00033456789999999999999999998765
No 46
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=6.6e-41 Score=314.58 Aligned_cols=258 Identities=25% Similarity=0.365 Sum_probs=201.2
Q ss_pred CCCCccCccccccceeEEEEEEcC-CCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCc
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDH-DDHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
.+|++.+.||+|+||.||+|.+.. ...+..||+|.++.... .....+.+|+.++.+++||||+++++++. .++
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~~ 79 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVIT-----RGN 79 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEe-----cCC
Confidence 468889999999999999998643 23467899999876533 23357889999999999999999999853 345
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCc
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGL 316 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 316 (484)
..++||||+++|+|.+++... ...+++..++.++.|++.||+||| +++++||||||+||+++.++.++++|||.
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~~---~~~l~~~~~~~~~~~i~~al~~lH---~~~iiH~dikp~nili~~~~~~~l~dfg~ 153 (266)
T cd05064 80 TMMIVTEYMSNGALDSFLRKH---EGQLVAGQLMGMLPGLASGMKYLS---EMGYVHKGLAAHKVLVNSDLVCKISGFRR 153 (266)
T ss_pred CcEEEEEeCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHH---HCCEeeccccHhhEEEcCCCcEEECCCcc
Confidence 789999999999999999743 235899999999999999999999 89999999999999999999999999998
Q ss_pred ccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhhc
Q 011508 317 AKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEAL 395 (484)
Q Consensus 317 a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 395 (484)
+....... ........++..|+|||.+.+..++.++|||||||++||+++ |+.||...... ...+.+
T Consensus 154 ~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~--~~~~~~---- 221 (266)
T cd05064 154 LQEDKSEA------IYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ--DVIKAV---- 221 (266)
T ss_pred cccccccc------hhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH--HHHHHH----
Confidence 76432111 011112235678999999988999999999999999999875 99999653211 011110
Q ss_pred chhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHH
Q 011508 396 PERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSF 466 (484)
Q Consensus 396 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i 466 (484)
.+.... ..+..++..+.+++..||+.+|++||+++||.+.|+++
T Consensus 222 -------~~~~~~--------------------~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 222 -------EDGFRL--------------------PAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred -------HCCCCC--------------------CCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 000000 00233466789999999999999999999999988764
No 47
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=1.6e-41 Score=317.27 Aligned_cols=253 Identities=34% Similarity=0.539 Sum_probs=192.6
Q ss_pred ccCccccccceeEEEEEEc--CCCCeeEEEEEEeeccCcc-chHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCceee
Q 011508 163 LENLIGAGSFGSVYKGIFD--HDDHETLVAVKVLNLQHRG-ASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFEA 239 (484)
Q Consensus 163 ~~~~lg~G~~g~Vy~~~~~--~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 239 (484)
+.+.||.|.||.||+|.+. ....+..|+||.++..... ..+.+.+|++.+++++||||++++|+|. .....+
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~-----~~~~~~ 77 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCI-----ENEPLF 77 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEE-----SSSSEE
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccc-----cccccc
Confidence 4578999999999999998 4556788999999654332 3578999999999999999999999985 233589
Q ss_pred EEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcccc
Q 011508 240 LVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKF 319 (484)
Q Consensus 240 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~ 319 (484)
+|+||+++|+|.+++... ....+++..++.|+.||+.||+||| +++++|+||+++||++++++.+||+|||++..
T Consensus 78 lv~e~~~~g~L~~~L~~~--~~~~~~~~~~~~i~~~i~~~l~~Lh---~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~ 152 (259)
T PF07714_consen 78 LVMEYCPGGSLDDYLKSK--NKEPLSEQQRLSIAIQIAEALSYLH---SNNIIHGNLSPSNILLDSNGQVKLSDFGLSRP 152 (259)
T ss_dssp EEEE--TTEBHHHHHHHT--CTTTSBHHHHHHHHHHHHHHHHHHH---HTTEEEST-SGGGEEEETTTEEEEESTTTGEE
T ss_pred cccccccccccccccccc--ccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccc
Confidence 999999999999999865 2345899999999999999999999 88999999999999999999999999999987
Q ss_pred cccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhhcchh
Q 011508 320 LPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEALPER 398 (484)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 398 (484)
...... ............|+|||.+....++.++||||||+++||+++ |+.||..... .++.....
T Consensus 153 ~~~~~~-----~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~-----~~~~~~~~--- 219 (259)
T PF07714_consen 153 ISEKSK-----YKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDN-----EEIIEKLK--- 219 (259)
T ss_dssp TTTSSS-----EEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCH-----HHHHHHHH---
T ss_pred cccccc-----ccccccccccccccccccccccccccccccccccccccccccccccccccccc-----cccccccc---
Confidence 622111 111122346788999999988889999999999999999999 7888765311 11111110
Q ss_pred hhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHH
Q 011508 399 LAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQL 463 (484)
Q Consensus 399 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 463 (484)
+.... ..+..|+..+.+++..||+.||++|||+.|++++|
T Consensus 220 -----~~~~~--------------------~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 220 -----QGQRL--------------------PIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp -----TTEET--------------------TSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred -----ccccc--------------------eeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 00000 00223466789999999999999999999999886
No 48
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.9e-42 Score=292.65 Aligned_cols=250 Identities=24% Similarity=0.337 Sum_probs=205.5
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
++|++++.||+|-||.||.|+ .+.++-.||+|++.+.. .+...++.+|+++-+.|+||||+++|++ |.+.
T Consensus 22 ~dfeigr~LgkgkFG~vYlar--ekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~-----fhd~ 94 (281)
T KOG0580|consen 22 DDFEIGRPLGKGKFGNVYLAR--EKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGY-----FHDS 94 (281)
T ss_pred hhccccccccCCccccEeEee--eccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhh-----eecc
Confidence 578999999999999999999 44567889999987543 3445789999999999999999999999 4556
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
...|+++||.++|++...|+... ...+++.....+..|+|.||.|+| .++++||||||+|+|++.++..||+|||
T Consensus 95 ~riyLilEya~~gel~k~L~~~~--~~~f~e~~~a~Yi~q~A~Al~y~h---~k~VIhRdiKpenlLlg~~~~lkiAdfG 169 (281)
T KOG0580|consen 95 KRIYLILEYAPRGELYKDLQEGR--MKRFDEQRAATYIKQLANALLYCH---LKRVIHRDIKPENLLLGSAGELKIADFG 169 (281)
T ss_pred ceeEEEEEecCCchHHHHHHhcc--cccccccchhHHHHHHHHHHHHhc---cCCcccCCCCHHHhccCCCCCeeccCCC
Confidence 69999999999999999998443 345888888999999999999999 9999999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhc
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEAL 395 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 395 (484)
.+...+ .......+||..|.|||...+...+...|+|++|++.||++.|.+||+....+ ........
T Consensus 170 wsV~~p---------~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~-etYkrI~k--- 236 (281)
T KOG0580|consen 170 WSVHAP---------SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHS-ETYKRIRK--- 236 (281)
T ss_pred ceeecC---------CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhH-HHHHHHHH---
Confidence 987543 22334578999999999999999999999999999999999999999875311 11111111
Q ss_pred chhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHH
Q 011508 396 PERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQL 463 (484)
Q Consensus 396 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 463 (484)
.++.+ +.....+..+++..|+..+|.+|.+..||++.=
T Consensus 237 ----~~~~~--------------------------p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hp 274 (281)
T KOG0580|consen 237 ----VDLKF--------------------------PSTISGGAADLISRLLVKNPIERLALTEVMDHP 274 (281)
T ss_pred ----ccccC--------------------------CcccChhHHHHHHHHhccCccccccHHHHhhhH
Confidence 11111 112255678999999999999999999998753
No 49
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=3.1e-41 Score=325.64 Aligned_cols=242 Identities=23% Similarity=0.285 Sum_probs=191.3
Q ss_pred CccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCceeeEE
Q 011508 165 NLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFEALV 241 (484)
Q Consensus 165 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 241 (484)
+.||+|+||.||+|+. ..+++.||+|+++... ......+.+|+.++++++||||+++++++ ..++..++|
T Consensus 1 ~~lG~G~~g~Vy~~~~--~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~-----~~~~~~~lv 73 (323)
T cd05571 1 KLLGKGTFGKVILVRE--KATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSF-----QTHDRLCFV 73 (323)
T ss_pred CeeeeCCCeEEEEEEE--CCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEE-----EcCCEEEEE
Confidence 4699999999999984 4467889999997532 22335678899999999999999999884 445588999
Q ss_pred eecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcccccc
Q 011508 242 YELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFLP 321 (484)
Q Consensus 242 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~~ 321 (484)
|||+++|+|.+++... ..+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 74 ~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~L~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~ 146 (323)
T cd05571 74 MEYANGGELFFHLSRE----RVFSEDRARFYGAEIVSALGYLH---SCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 146 (323)
T ss_pred EeCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccc
Confidence 9999999999998743 35889999999999999999999 8999999999999999999999999999987532
Q ss_pred cccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchhhhh
Q 011508 322 EAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPERLAE 401 (484)
Q Consensus 322 ~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (484)
.. ........||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......
T Consensus 147 ~~-------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~-----~~~~~~-------- 206 (323)
T cd05571 147 SD-------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-----EKLFEL-------- 206 (323)
T ss_pred cC-------CCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCH-----HHHHHH--------
Confidence 11 1112235689999999999999999999999999999999999999965211 111110
Q ss_pred hcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCC-----CHHHHHH
Q 011508 402 IVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERM-----NMEEVAA 461 (484)
Q Consensus 402 ~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~ 461 (484)
+....... +.....++.+++.+||+.||++|| ++.|+++
T Consensus 207 ~~~~~~~~---------------------p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 207 ILMEEIRF---------------------PRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred HHcCCCCC---------------------CCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 00000000 111255688999999999999999 7998875
No 50
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=3.5e-41 Score=326.93 Aligned_cols=254 Identities=21% Similarity=0.280 Sum_probs=198.8
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
++|++.+.||+|+||.||+|+.. .+++.||+|+++... ......+.+|++++..++||||+++++++ ..+
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~-----~~~ 73 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKK--DTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAF-----QDD 73 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEEC--CCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEE-----EcC
Confidence 36889999999999999999954 356789999997542 22345688999999999999999999885 345
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
+..++||||+++|+|.+++... ..+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||
T Consensus 74 ~~~~lv~e~~~g~~L~~~l~~~----~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kL~Dfg 146 (333)
T cd05600 74 EYLYLAMEYVPGGDFRTLLNNL----GVLSEDHARFYMAEMFEAVDALH---ELGYIHRDLKPENFLIDASGHIKLTDFG 146 (333)
T ss_pred CEEEEEEeCCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCCEEEEeCc
Confidence 5889999999999999999743 34889999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhc
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEAL 395 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 395 (484)
++..... ......|++.|+|||++.+..++.++|||||||++|||++|+.||...... +......
T Consensus 147 ~a~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~-----~~~~~i~ 211 (333)
T cd05600 147 LSKGIVT----------YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPN-----ETWENLK 211 (333)
T ss_pred CCccccc----------ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHH-----HHHHHHH
Confidence 9876532 122346899999999999989999999999999999999999999753211 1110000
Q ss_pred chhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 396 PERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 396 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
. ............. ...+..++.+++.+||..+|++||+++|+++.
T Consensus 212 ~--~~~~~~~~~~~~~-------------------~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 212 Y--WKETLQRPVYDDP-------------------RFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred h--ccccccCCCCCcc-------------------ccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 0 0000000000000 01225578899999999999999999999965
No 51
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=3.5e-41 Score=327.99 Aligned_cols=279 Identities=22% Similarity=0.285 Sum_probs=198.7
Q ss_pred CCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC--ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH--RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
+|++.+.||+|+||.||+|+. ..++..||+|++.... ......+.+|++++++++||||+++++++..........
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~--~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 78 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAID--THTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKD 78 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEE--CCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCce
Confidence 478889999999999999984 4467889999987432 223356889999999999999999999876544334446
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
.++||||+ +++|.+++... ..+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||++
T Consensus 79 ~~lv~e~~-~~~L~~~l~~~----~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~ 150 (338)
T cd07859 79 IYVVFELM-ESDLHQVIKAN----DDLTPEHHQFFLYQLLRALKYIH---TANVFHRDLKPKNILANADCKLKICDFGLA 150 (338)
T ss_pred EEEEEecC-CCCHHHHHHhc----ccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCcEEEccCccc
Confidence 89999999 57899988633 34899999999999999999999 899999999999999999999999999999
Q ss_pred cccccccccCCCCccccccccccccccCccccCC--CCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhc
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG--SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEAL 395 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 395 (484)
+....... .........|+..|+|||++.+ ..++.++|||||||++|||+||+.||..... ......+....
T Consensus 151 ~~~~~~~~----~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~--~~~~~~~~~~~ 224 (338)
T cd07859 151 RVAFNDTP----TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNV--VHQLDLITDLL 224 (338)
T ss_pred cccccccC----ccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCCh--HHHHHHHHHHh
Confidence 75432211 0111223568999999998765 6789999999999999999999999965321 11111111110
Q ss_pred c----hhhhhhcCccccc---ccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 396 P----ERLAEIVDPVLLV---EREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 396 ~----~~~~~~~d~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
. .....+....... ....... . .... ....+...+.+++.+||+.||++|||++|+++.
T Consensus 225 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~--~----~~~~--~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 225 GTPSPETISRVRNEKARRYLSSMRKKQP--V----PFSQ--KFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred CCCCHHHHHHhhhhhHHHHHHhhcccCC--C----chHH--hcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 0 0011110000000 0000000 0 0000 001124567899999999999999999999964
No 52
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=2.4e-41 Score=327.17 Aligned_cols=246 Identities=24% Similarity=0.302 Sum_probs=196.1
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
++|++.+.||+|+||.||+|+.. .+++.||+|+++... ....+.+.+|+.++++++||||+++++++ ..+
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~ 90 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHK--GTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSF-----QDE 90 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEEC--CCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEE-----EcC
Confidence 56889999999999999999954 457889999987532 22345688999999999999999999985 445
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
+..++||||+++|+|.+++... ..+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||
T Consensus 91 ~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kl~Dfg 163 (329)
T PTZ00263 91 NRVYFLLEFVVGGELFTHLRKA----GRFPNDVAKFYHAELVLAFEYLH---SKDIIYRDLKPENLLLDNKGHVKVTDFG 163 (329)
T ss_pred CEEEEEEcCCCCChHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEECCCCCEEEeecc
Confidence 5889999999999999999743 34788899999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhc
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEAL 395 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 395 (484)
++....... ....|++.|+|||++.+..++.++|||||||++|||++|+.||..... .+...
T Consensus 164 ~~~~~~~~~----------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~-----~~~~~--- 225 (329)
T PTZ00263 164 FAKKVPDRT----------FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTP-----FRIYE--- 225 (329)
T ss_pred CceEcCCCc----------ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCH-----HHHHH---
Confidence 998653211 124689999999999998899999999999999999999999965211 11111
Q ss_pred chhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCC-----HHHHHHH
Q 011508 396 PERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMN-----MEEVAAQ 462 (484)
Q Consensus 396 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~evl~~ 462 (484)
.+....+.. +..+...+.+++.+||+.||++||+ ++++++.
T Consensus 226 -----~i~~~~~~~---------------------p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 226 -----KILAGRLKF---------------------PNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred -----HHhcCCcCC---------------------CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 111110000 1112456789999999999999997 6777744
No 53
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.4e-40 Score=322.21 Aligned_cols=200 Identities=27% Similarity=0.382 Sum_probs=170.6
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCc
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
.++|++.+.||+|+||.||+++. ..++..+|+|++..... .....+.+|++++++++||||+++++++.. ++
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~ 76 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQH--KPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-----DG 76 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEE--CCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE-----CC
Confidence 46899999999999999999984 44578899999876532 234578999999999999999999998643 44
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCc
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGL 316 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 316 (484)
..++||||+++++|.+++... ..+++..+..++.|++.||+|||+ ..+|+||||||+||+++.++.+||+|||+
T Consensus 77 ~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~i~~~l~~lH~--~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 150 (331)
T cd06649 77 EISICMEHMDGGSLDQVLKEA----KRIPEEILGKVSIAVLRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGV 150 (331)
T ss_pred EEEEEeecCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHhh--cCCEEcCCCChhhEEEcCCCcEEEccCcc
Confidence 789999999999999999743 348899999999999999999993 24699999999999999999999999999
Q ss_pred ccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCC
Q 011508 317 AKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNE 379 (484)
Q Consensus 317 a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~ 379 (484)
+....... .....|+..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 151 ~~~~~~~~---------~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~ 204 (331)
T cd06649 151 SGQLIDSM---------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPP 204 (331)
T ss_pred cccccccc---------cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 87653211 1224589999999999998999999999999999999999999965
No 54
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=7.5e-41 Score=324.33 Aligned_cols=267 Identities=25% Similarity=0.362 Sum_probs=204.3
Q ss_pred cCCCCccCccccccceeEEEEEEcCC---CCeeEEEEEEeeccCc-cchHHHHHHHHHHHcC-CCCCceeEeeeeeeecc
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHD---DHETLVAVKVLNLQHR-GASKSFIAECQALRSI-RHRNLVKIITSCVSVDF 232 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~---~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 232 (484)
.++|++.+.||+|+||.||+|...+. .+++.||+|+++.... ...+.+.+|+.++.++ +|+||++++++|.
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~---- 81 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACT---- 81 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEe----
Confidence 45789999999999999999974322 2357899999875432 2235678899999999 8999999999874
Q ss_pred CCCceeeEEeecccCCCHHHHHhhcCCC----------------------------------------------------
Q 011508 233 QGNDFEALVYELMVNGSLEEWLHLNRDA---------------------------------------------------- 260 (484)
Q Consensus 233 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~---------------------------------------------------- 260 (484)
..+...+++|||+++++|.+++......
T Consensus 82 ~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (337)
T cd05054 82 KPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEE 161 (337)
T ss_pred cCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchh
Confidence 3345778999999999999998643210
Q ss_pred -----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcccccccccccCCCCccccc
Q 011508 261 -----PRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFLPEAANNLSSNQSSSV 335 (484)
Q Consensus 261 -----~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~ 335 (484)
...+++..+..++.||+.||+||| +++|+||||||+||++++++.++|+|||++..+....... ...
T Consensus 162 ~~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~-----~~~ 233 (337)
T cd05054 162 GDELYKEPLTLEDLISYSFQVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYV-----RKG 233 (337)
T ss_pred hhHHhhcCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchh-----hcc
Confidence 125899999999999999999999 8999999999999999999999999999998763322111 111
Q ss_pred cccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhhcchhhhhhcCcccccccccc
Q 011508 336 GVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEG 414 (484)
Q Consensus 336 ~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 414 (484)
...++..|+|||++.+..++.++|||||||++|||++ |..||....... .+..... .. ....
T Consensus 234 ~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~-~~~~~~~----~~----~~~~-------- 296 (337)
T cd05054 234 DARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE-EFCRRLK----EG----TRMR-------- 296 (337)
T ss_pred CCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH-HHHHHHh----cc----CCCC--------
Confidence 2345678999999999999999999999999999998 999986532111 1111000 00 0000
Q ss_pred cchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHH
Q 011508 415 ETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRN 468 (484)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~ 468 (484)
.+..+..++.+++.+||+.+|++||++.||++.|+++.+
T Consensus 297 ---------------~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 297 ---------------APEYATPEIYSIMLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred ---------------CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 011225578999999999999999999999999998754
No 55
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=2.5e-40 Score=314.41 Aligned_cols=265 Identities=28% Similarity=0.445 Sum_probs=206.5
Q ss_pred CCCCccCccccccceeEEEEEEcC---CCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDH---DDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~---~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
++|.+.+.||+|+||.||++.... ..++..+|+|.+........+.+.+|++++++++|+||+++++++. ..
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~ 79 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCV-----EG 79 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEe-----cC
Confidence 568889999999999999997532 2345679999987655555667999999999999999999999864 34
Q ss_pred ceeeEEeecccCCCHHHHHhhcCC---------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRD---------APRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGE 306 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~---------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~ 306 (484)
...++||||+++++|.+++..... ....+++..++.++.|++.||+||| +++++||||||+||+++++
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH---~~~i~H~dlkp~Nili~~~ 156 (288)
T cd05093 80 DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGEN 156 (288)
T ss_pred CccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccCcceEEEccC
Confidence 578999999999999999974431 2235899999999999999999999 8999999999999999999
Q ss_pred CceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCc
Q 011508 307 LTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNL 385 (484)
Q Consensus 307 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~ 385 (484)
+.+||+|||.+........ ........++..|+|||.+.+..++.++|||||||++|||++ |..||......
T Consensus 157 ~~~kl~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~-- 229 (288)
T cd05093 157 LLVKIGDFGMSRDVYSTDY-----YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN-- 229 (288)
T ss_pred CcEEeccCCccccccCCce-----eecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--
Confidence 9999999999876532211 011112335778999999988889999999999999999998 89998653211
Q ss_pred cHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHH
Q 011508 386 TLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLS 465 (484)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 465 (484)
..... +........ +..++.++.+++.+||+.||.+|||+.||.+.|+.
T Consensus 230 ---~~~~~--------i~~~~~~~~--------------------~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~ 278 (288)
T cd05093 230 ---EVIEC--------ITQGRVLQR--------------------PRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQN 278 (288)
T ss_pred ---HHHHH--------HHcCCcCCC--------------------CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHH
Confidence 11110 000000000 11124578999999999999999999999999999
Q ss_pred HHHH
Q 011508 466 FRNK 469 (484)
Q Consensus 466 i~~~ 469 (484)
+...
T Consensus 279 ~~~~ 282 (288)
T cd05093 279 LAKA 282 (288)
T ss_pred HHHh
Confidence 8754
No 56
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=5.8e-41 Score=318.70 Aligned_cols=277 Identities=21% Similarity=0.279 Sum_probs=198.1
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCc
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
++|++.+.||+|+||.||+|+.. .++..||+|+++.... ...+.+.+|+.+++.++||||+++++++ ..++
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~--~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~ 73 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHK--ETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAF-----RRRG 73 (287)
T ss_pred CCceEEEEecccCCEEEEEEEEC--CCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhE-----ecCC
Confidence 46899999999999999999954 4578899999875432 2345788999999999999999999885 3455
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCc
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGL 316 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 316 (484)
..++||||++++.+..+.. ....+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+
T Consensus 74 ~~~lv~e~~~~~~l~~~~~----~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dlkp~Nill~~~~~~kl~Dfg~ 146 (287)
T cd07848 74 KLYLVFEYVEKNMLELLEE----MPNGVPPEKVRSYIYQLIKAIHWCH---KNDIVHRDIKPENLLISHNDVLKLCDFGF 146 (287)
T ss_pred EEEEEEecCCCCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEEeeccC
Confidence 8899999998877665443 1235889999999999999999999 89999999999999999999999999999
Q ss_pred ccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHH--hh
Q 011508 317 AKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVK--EA 394 (484)
Q Consensus 317 a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~--~~ 394 (484)
+....... ........|+..|+|||++.+..++.++|||||||++|||++|+.||....... .+..... ..
T Consensus 147 ~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~-~~~~~~~~~~~ 219 (287)
T cd07848 147 ARNLSEGS------NANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEID-QLFTIQKVLGP 219 (287)
T ss_pred cccccccc------cccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhhCC
Confidence 98653221 111123468999999999988889999999999999999999999997632211 1111000 01
Q ss_pred cchh-hhhh-cCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 395 LPER-LAEI-VDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 395 ~~~~-~~~~-~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
.+.. .... .++........... ............++..+.+++.+||+.||++|||++|+++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 220 LPAEQMKLFYSNPRFHGLRFPAVN-----HPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred CCHHHHHhhhccchhcccccCccc-----CcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 1111 1000 00000000000000 0000000001123567999999999999999999999875
No 57
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=1.3e-40 Score=312.78 Aligned_cols=262 Identities=22% Similarity=0.342 Sum_probs=205.1
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
++|++.+.||+|+||.||+|+... +++.||+|.++... ......+.+|+++++.++|||++++++++.. .
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~--~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~ 74 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLL--DRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIE-----D 74 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeC--CCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEE-----C
Confidence 578999999999999999998543 56789999876432 2223568899999999999999999998543 3
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
+..++|+||+++++|.+++.........+++..++.++.|++.||+||| +++++|+||||+||+++.++.++|+|||
T Consensus 75 ~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~~~nil~~~~~~~~l~d~g 151 (267)
T cd08228 75 NELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMH---SRRVMHRDIKPANVFITATGVVKLGDLG 151 (267)
T ss_pred CeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCCHHHEEEcCCCCEEECccc
Confidence 4789999999999999998754444455889999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhc
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEAL 395 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 395 (484)
.+....... .......++..|+|||.+.+..++.++||||||+++|||++|+.||...... ...+....
T Consensus 152 ~~~~~~~~~-------~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~---~~~~~~~~- 220 (267)
T cd08228 152 LGRFFSSKT-------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN---LFSLCQKI- 220 (267)
T ss_pred cceeccchh-------HHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCcccccc---HHHHHHHH-
Confidence 988654321 1111235788999999998888999999999999999999999998643221 11111110
Q ss_pred chhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHH
Q 011508 396 PERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFR 467 (484)
Q Consensus 396 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~ 467 (484)
.....+.. ....++..+.+++.+||+.+|++||++.||++.++.++
T Consensus 221 ----~~~~~~~~----------------------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 221 ----EQCDYPPL----------------------PTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred ----hcCCCCCC----------------------ChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 00000000 01223567899999999999999999999999998764
No 58
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-41 Score=329.87 Aligned_cols=244 Identities=27% Similarity=0.350 Sum_probs=201.5
Q ss_pred hcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcC-CCCCceeEeeeeeeecc
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSI-RHRNLVKIITSCVSVDF 232 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 232 (484)
.-++|.+..+||+|+||+|+++..+. ++..+|||++++.. .++.+....|.+++... +||.++.++.+ |
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~--~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~-----f 438 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKG--TNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSC-----F 438 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcC--CCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccc-----c
Confidence 34678999999999999999999654 56799999998764 45567888899988877 59999999988 6
Q ss_pred CCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEc
Q 011508 233 QGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVS 312 (484)
Q Consensus 233 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~ 312 (484)
+..++.+.||||+.||++..+.+ ...+++..+.-++..++.||.||| +++||+||||.+|||||.+|.+||+
T Consensus 439 QT~~~l~fvmey~~Ggdm~~~~~-----~~~F~e~rarfyaAev~l~L~fLH---~~~IIYRDlKLdNiLLD~eGh~kiA 510 (694)
T KOG0694|consen 439 QTKEHLFFVMEYVAGGDLMHHIH-----TDVFSEPRARFYAAEVVLGLQFLH---ENGIIYRDLKLDNLLLDTEGHVKIA 510 (694)
T ss_pred ccCCeEEEEEEecCCCcEEEEEe-----cccccHHHHHHHHHHHHHHHHHHH---hcCceeeecchhheEEcccCcEEec
Confidence 77789999999999999544433 345999999999999999999999 9999999999999999999999999
Q ss_pred ccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHH
Q 011508 313 DFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVK 392 (484)
Q Consensus 313 Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 392 (484)
|||+++..- .......+++||+.|+|||++.+..|+.+.|.|||||+||||+.|+.||.+...+
T Consensus 511 DFGlcKe~m-------~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEe--------- 574 (694)
T KOG0694|consen 511 DFGLCKEGM-------GQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEE--------- 574 (694)
T ss_pred ccccccccC-------CCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHH---------
Confidence 999998642 2234556789999999999999999999999999999999999999999863221
Q ss_pred hhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCH
Q 011508 393 EALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNM 456 (484)
Q Consensus 393 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~ 456 (484)
++.|..+..++ .-|..++.+.+.++.+++..+|++|--+
T Consensus 575 --------e~FdsI~~d~~-----------------~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 575 --------EVFDSIVNDEV-----------------RYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred --------HHHHHHhcCCC-----------------CCCCcccHHHHHHHHHHhccCcccccCC
Confidence 11222221111 1134457788999999999999999876
No 59
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=1e-40 Score=328.94 Aligned_cols=266 Identities=29% Similarity=0.411 Sum_probs=203.9
Q ss_pred hcCCCCccCccccccceeEEEEEEcCC---CCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCC-CCCceeEeeeeeeec
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHD---DHETLVAVKVLNLQHR-GASKSFIAECQALRSIR-HRNLVKIITSCVSVD 231 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~---~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~ 231 (484)
..++|.+.+.||+|+||.||+|+.... .....||||+++.... ...+.+.+|+++++++. ||||++++++|.
T Consensus 35 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~--- 111 (400)
T cd05105 35 PRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACT--- 111 (400)
T ss_pred cccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEc---
Confidence 356889999999999999999985322 2245799999975433 23457899999999996 999999999964
Q ss_pred cCCCceeeEEeecccCCCHHHHHhhcCC----------------------------------------------------
Q 011508 232 FQGNDFEALVYELMVNGSLEEWLHLNRD---------------------------------------------------- 259 (484)
Q Consensus 232 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~---------------------------------------------------- 259 (484)
.....++||||+++|+|.+++.....
T Consensus 112 --~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (400)
T cd05105 112 --KSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYV 189 (400)
T ss_pred --cCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccc
Confidence 34578999999999999999865321
Q ss_pred ----------------------------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCC
Q 011508 260 ----------------------------------------APRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPS 299 (484)
Q Consensus 260 ----------------------------------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~ 299 (484)
....+++..++.++.|++.||+||| +.+|+||||||+
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivH~dikp~ 266 (400)
T cd05105 190 PMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLA---SKNCVHRDLAAR 266 (400)
T ss_pred hhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChH
Confidence 0134788889999999999999999 899999999999
Q ss_pred CeeecCCCceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCC
Q 011508 300 NVLLDGELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTN 378 (484)
Q Consensus 300 NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~ 378 (484)
||+++.++.+||+|||+++....... ........++..|+|||.+.+..++.++|||||||++|||++ |..||.
T Consensus 267 Nill~~~~~~kL~DfGla~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~ 341 (400)
T cd05105 267 NVLLAQGKIVKICDFGLARDIMHDSN-----YVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYP 341 (400)
T ss_pred hEEEeCCCEEEEEeCCcceecccccc-----ccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCc
Confidence 99999999999999999986532211 111122346788999999988889999999999999999997 999987
Q ss_pred CCccCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHH
Q 011508 379 EMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEE 458 (484)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~e 458 (484)
........ ...+. .. .. .. .+..++..+.+++.+||+.||++|||+.+
T Consensus 342 ~~~~~~~~-~~~~~----~~----~~--~~---------------------~~~~~~~~l~~li~~cl~~dP~~RPt~~~ 389 (400)
T cd05105 342 GMIVDSTF-YNKIK----SG----YR--MA---------------------KPDHATQEVYDIMVKCWNSEPEKRPSFLH 389 (400)
T ss_pred ccchhHHH-HHHHh----cC----CC--CC---------------------CCccCCHHHHHHHHHHCccCHhHCcCHHH
Confidence 53221110 00000 00 00 00 01233567899999999999999999999
Q ss_pred HHHHHHHHH
Q 011508 459 VAAQLLSFR 467 (484)
Q Consensus 459 vl~~L~~i~ 467 (484)
|.+.|+.+.
T Consensus 390 l~~~l~~l~ 398 (400)
T cd05105 390 LSDIVESLL 398 (400)
T ss_pred HHHHHHHHc
Confidence 999998753
No 60
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=1.3e-40 Score=315.69 Aligned_cols=261 Identities=27% Similarity=0.463 Sum_probs=203.1
Q ss_pred CCCCccCccccccceeEEEEEEcCCC---CeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDD---HETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQG 234 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~---~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 234 (484)
++|++.+.||+|+||.||+|...... ....||+|.+..... .....+.+|+.++.+++||||+++++++. .
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~-----~ 79 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCT-----K 79 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEc-----C
Confidence 36788999999999999999865332 346799999875432 23356889999999999999999999853 3
Q ss_pred CceeeEEeecccCCCHHHHHhhcCCC------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCee
Q 011508 235 NDFEALVYELMVNGSLEEWLHLNRDA------------PRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVL 302 (484)
Q Consensus 235 ~~~~~lv~e~~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIl 302 (484)
....+++|||+++++|.+++...... ...+++..++.++.|++.||+||| +++++||||||+||+
T Consensus 80 ~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH---~~~i~H~dlkp~Nil 156 (283)
T cd05048 80 EQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLS---SHHFVHRDLAARNCL 156 (283)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccccceEE
Confidence 45789999999999999999754221 145889999999999999999999 899999999999999
Q ss_pred ecCCCceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCc
Q 011508 303 LDGELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMF 381 (484)
Q Consensus 303 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~ 381 (484)
+++++.++|+|||++........ ........++..|+|||.+.+..++.++|||||||++|||++ |..||....
T Consensus 157 ~~~~~~~~L~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~ 231 (283)
T cd05048 157 VGEGLTVKISDFGLSRDIYSADY-----YRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFS 231 (283)
T ss_pred EcCCCcEEECCCcceeecccccc-----ccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCC
Confidence 99999999999999876532211 111122346788999999988899999999999999999998 999987532
Q ss_pred cCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 382 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
.. .+...+. ..... ..+..++.++.+++.+||+.||.+||++.||++
T Consensus 232 ~~--~~~~~i~-----------~~~~~--------------------~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~ 278 (283)
T cd05048 232 NQ--EVIEMIR-----------SRQLL--------------------PCPEDCPARVYALMIECWNEIPARRPRFKDIHT 278 (283)
T ss_pred HH--HHHHHHH-----------cCCcC--------------------CCcccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 11 1111110 00000 002344778999999999999999999999999
Q ss_pred HHHH
Q 011508 462 QLLS 465 (484)
Q Consensus 462 ~L~~ 465 (484)
.|+.
T Consensus 279 ~l~~ 282 (283)
T cd05048 279 RLRS 282 (283)
T ss_pred HHhc
Confidence 9975
No 61
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=2.2e-40 Score=315.18 Aligned_cols=275 Identities=23% Similarity=0.291 Sum_probs=198.2
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcC---CCCCceeEeeeeeeeccC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSI---RHRNLVKIITSCVSVDFQ 233 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~~~~~ 233 (484)
.+|++.+.||+|+||.||+|+... .++..||+|+++.... .....+.+|+.+++.+ +||||++++++|......
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~ 79 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLK-NGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 79 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcC-CCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCC
Confidence 368899999999999999998532 2357899999875432 2234566777777765 699999999988654444
Q ss_pred CCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcc
Q 011508 234 GNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSD 313 (484)
Q Consensus 234 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~D 313 (484)
.....++||||++ ++|.+++.... ...+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|
T Consensus 80 ~~~~~~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~lH---~~~iiH~dlkp~Nil~~~~~~~kl~D 153 (290)
T cd07862 80 RETKLTLVFEHVD-QDLTTYLDKVP--EPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLAD 153 (290)
T ss_pred CCCcEEEEEccCC-CCHHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEcCCCCEEEcc
Confidence 5567899999995 69999987433 235889999999999999999999 89999999999999999999999999
Q ss_pred cCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHh
Q 011508 314 FGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKE 393 (484)
Q Consensus 314 fg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 393 (484)
||++...... .......|+..|+|||.+.+..++.++|||||||++|||++|+.||...... ..+......
T Consensus 154 fg~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~-~~~~~i~~~ 224 (290)
T cd07862 154 FGLARIYSFQ--------MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV-DQLGKILDV 224 (290)
T ss_pred ccceEeccCC--------cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHH-HHHHHHHHH
Confidence 9999765322 1122345899999999998888999999999999999999999999764221 111111111
Q ss_pred hc---chhhhhhc---CcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 394 AL---PERLAEIV---DPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 394 ~~---~~~~~~~~---d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
.. +....... ...+.... . ...... ..++...+.+++.+|++.||++|||+.|+++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~------~-----~~~~~~-~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 225 IGLPGEEDWPRDVALPRQAFHSKS------A-----QPIEKF-VTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred hCCCChhhchhhhcccchhccCCC------C-----CCHHHH-ccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 00 00000000 00000000 0 000000 1123556789999999999999999999985
No 62
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=1e-40 Score=316.58 Aligned_cols=273 Identities=28% Similarity=0.402 Sum_probs=204.9
Q ss_pred CCCCccCccccccceeEEEEEEc--CCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCc
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFD--HDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~--~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
.+|++.+.||+|+||.||++... +..++..||+|.+........+.+.+|++++++++||||+++++++.. .+..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~---~~~~ 80 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYS---AGRR 80 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEcc---CCCC
Confidence 46888999999999999999864 344577899999876655555788999999999999999999998643 2344
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCc
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGL 316 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 316 (484)
..++||||+++++|.+++.... ..+++..++.++.|++.||+||| +++++||||||+||++++++.+||+|||+
T Consensus 81 ~~~lv~e~~~~~~L~~~l~~~~---~~l~~~~~~~~~~~l~~aL~~LH---~~~i~H~dlkp~nili~~~~~~~l~dfg~ 154 (284)
T cd05081 81 NLRLVMEYLPYGSLRDYLQKHR---ERLDHRKLLLYASQICKGMEYLG---SKRYVHRDLATRNILVESENRVKIGDFGL 154 (284)
T ss_pred ceEEEEEecCCCCHHHHHHhcC---cCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHhhEEECCCCeEEECCCcc
Confidence 6789999999999999997432 34899999999999999999999 89999999999999999999999999999
Q ss_pred ccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcc
Q 011508 317 AKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALP 396 (484)
Q Consensus 317 a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 396 (484)
+.......... .......++..|+|||++.+..++.++|||||||++|||++|..|+...... ..........
T Consensus 155 ~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~---~~~~~~~~~~ 227 (284)
T cd05081 155 TKVLPQDKEYY----KVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAE---FMRMMGNDKQ 227 (284)
T ss_pred cccccCCCcce----eecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchh---hhhhcccccc
Confidence 98764322110 0011122445699999998888999999999999999999988775432110 0000000000
Q ss_pred -----hhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHH
Q 011508 397 -----ERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSF 466 (484)
Q Consensus 397 -----~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i 466 (484)
..+.+.+.... ....+..++.++.+++.+||+.+|++|||+.||++.|+.+
T Consensus 228 ~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 228 GQMIVYHLIELLKNNG-------------------RLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred cccchHHHHHHHhcCC-------------------cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 00011111000 0001233466799999999999999999999999999876
No 63
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=1.4e-40 Score=314.95 Aligned_cols=260 Identities=30% Similarity=0.469 Sum_probs=203.2
Q ss_pred CCCCccCccccccceeEEEEEEcCC---CCeeEEEEEEeeccCcc-chHHHHHHHHHHHcCCCCCceeEeeeeeeeccCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHD---DHETLVAVKVLNLQHRG-ASKSFIAECQALRSIRHRNLVKIITSCVSVDFQG 234 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~---~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 234 (484)
++|.+.+.||+|+||.||+|...+. .....||+|.++..... ..+.+.+|+++++.++|+||+++++++..
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~----- 79 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTE----- 79 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEec-----
Confidence 4678889999999999999986433 34578999998765443 34689999999999999999999998643
Q ss_pred CceeeEEeecccCCCHHHHHhhcCC----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeec
Q 011508 235 NDFEALVYELMVNGSLEEWLHLNRD----------APRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLD 304 (484)
Q Consensus 235 ~~~~~lv~e~~~~gsL~~~l~~~~~----------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~ 304 (484)
....++||||+++++|.+++..... ....+++.++..++.|++.|++||| +++++||||||+||+++
T Consensus 80 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH---~~~i~h~dlkp~nili~ 156 (280)
T cd05049 80 GDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLA---SQHFVHRDLATRNCLVG 156 (280)
T ss_pred CCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeeccccccceEEEc
Confidence 3578999999999999999975421 2245789999999999999999999 89999999999999999
Q ss_pred CCCceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccC
Q 011508 305 GELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTG 383 (484)
Q Consensus 305 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~ 383 (484)
.++.+||+|||.+........ ........++..|+|||++.+..++.++|||||||++|||++ |+.||......
T Consensus 157 ~~~~~kl~d~g~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~ 231 (280)
T cd05049 157 YDLVVKIGDFGMSRDVYTTDY-----YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNE 231 (280)
T ss_pred CCCeEEECCcccceecccCcc-----eecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHH
Confidence 999999999999875432211 011112345788999999999999999999999999999998 99998653211
Q ss_pred CccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHH
Q 011508 384 NLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQL 463 (484)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 463 (484)
...+.+. ...... .+..++..+.+++.+||+.||++||++.||++.|
T Consensus 232 --~~~~~~~-----------~~~~~~--------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l 278 (280)
T cd05049 232 --EVIECIT-----------QGRLLQ--------------------RPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERL 278 (280)
T ss_pred --HHHHHHH-----------cCCcCC--------------------CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHh
Confidence 1111110 000000 0112356789999999999999999999999988
Q ss_pred H
Q 011508 464 L 464 (484)
Q Consensus 464 ~ 464 (484)
+
T Consensus 279 ~ 279 (280)
T cd05049 279 Q 279 (280)
T ss_pred h
Confidence 6
No 64
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=6.2e-41 Score=322.06 Aligned_cols=240 Identities=26% Similarity=0.340 Sum_probs=188.7
Q ss_pred cccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCceeeEEee
Q 011508 167 IGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFEALVYE 243 (484)
Q Consensus 167 lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 243 (484)
||+|+||.||+|+.. .+++.||+|+++... ......+.+|+.++.+++||||+++++++ ..++..++|||
T Consensus 1 lg~G~~g~Vy~~~~~--~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~~lv~e 73 (312)
T cd05585 1 IGKGSFGKVMQVRKR--DTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSF-----QSPEKLYLVLA 73 (312)
T ss_pred CCcCCCeEEEEEEEC--CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEE-----ecCCeEEEEEc
Confidence 799999999999854 456789999987432 23345678899999999999999999885 34458899999
Q ss_pred cccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcccccccc
Q 011508 244 LMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFLPEA 323 (484)
Q Consensus 244 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~~~~ 323 (484)
|+++|+|.+++... ..+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++.....
T Consensus 74 ~~~~g~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~ 146 (312)
T cd05585 74 FINGGELFHHLQRE----GRFDLSRARFYTAELLCALENLH---KFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKD 146 (312)
T ss_pred CCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHeEECCCCcEEEEECcccccCccC
Confidence 99999999999743 34889999999999999999999 899999999999999999999999999998754221
Q ss_pred cccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchhhhhhc
Q 011508 324 ANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPERLAEIV 403 (484)
Q Consensus 324 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (484)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..+..... .
T Consensus 147 ~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~-----~~~~~~~~--------~ 206 (312)
T cd05585 147 D-------DKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDEN-----VNEMYRKI--------L 206 (312)
T ss_pred C-------CccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCC-----HHHHHHHH--------H
Confidence 1 11223468999999999999999999999999999999999999996531 11111111 1
Q ss_pred CcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCC---HHHHHH
Q 011508 404 DPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMN---MEEVAA 461 (484)
Q Consensus 404 d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt---~~evl~ 461 (484)
...... +..+..++.+++.+||+.||++||+ +.|++.
T Consensus 207 ~~~~~~---------------------~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~ 246 (312)
T cd05585 207 QEPLRF---------------------PDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKN 246 (312)
T ss_pred cCCCCC---------------------CCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHc
Confidence 100000 1122557889999999999999985 555554
No 65
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-41 Score=323.07 Aligned_cols=260 Identities=27% Similarity=0.431 Sum_probs=214.6
Q ss_pred cCCCCccCccccccceeEEEEEEcCC--CCeeEEEEEEeeccC-ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCC
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHD--DHETLVAVKVLNLQH-RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQG 234 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~--~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 234 (484)
.+...+.++||.|.||.||+|++.+- +..-.||||..+.+. ....+.|..|..+|++++||||++++|.|.+.
T Consensus 388 Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~---- 463 (974)
T KOG4257|consen 388 RELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ---- 463 (974)
T ss_pred hhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeecc----
Confidence 34455678899999999999997544 233468999888644 34567899999999999999999999998643
Q ss_pred CceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEccc
Q 011508 235 NDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDF 314 (484)
Q Consensus 235 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 314 (484)
..|||||.++.|.|..||+.+. ..++......++.||+.||+||| +.++|||||..+|||+....-+||+||
T Consensus 464 --P~WivmEL~~~GELr~yLq~nk---~sL~l~tL~ly~~Qi~talaYLe---SkrfVHRDIAaRNiLVsSp~CVKLaDF 535 (974)
T KOG4257|consen 464 --PMWIVMELAPLGELREYLQQNK---DSLPLRTLTLYCYQICTALAYLE---SKRFVHRDIAARNILVSSPQCVKLADF 535 (974)
T ss_pred --ceeEEEecccchhHHHHHHhcc---ccchHHHHHHHHHHHHHHHHHHH---hhchhhhhhhhhheeecCcceeeeccc
Confidence 5799999999999999998554 35888999999999999999999 999999999999999999999999999
Q ss_pred CcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHh
Q 011508 315 GLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKE 393 (484)
Q Consensus 315 g~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~ 393 (484)
|+++.+..+...... ...-+..|||||.+.-..++.+||||.|||.+||++. |..||.+..+.+...
T Consensus 536 GLSR~~ed~~yYkaS------~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~------ 603 (974)
T KOG4257|consen 536 GLSRYLEDDAYYKAS------RGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIG------ 603 (974)
T ss_pred chhhhccccchhhcc------ccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEE------
Confidence 999998665432221 2345788999999999999999999999999999988 999998754432110
Q ss_pred hcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHH
Q 011508 394 ALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRN 468 (484)
Q Consensus 394 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~ 468 (484)
.- + ...+-..++.|+..|..|+.+||+.+|.+||.+.|+.+.|+++.+
T Consensus 604 --------------~i--E-----------nGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 604 --------------HI--E-----------NGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred --------------Ee--c-----------CCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 00 0 111222377899999999999999999999999999999999886
No 66
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.1e-41 Score=319.73 Aligned_cols=253 Identities=24% Similarity=0.318 Sum_probs=208.2
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCc
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
++|..++++|+|+||.++.++ ++.+.+.+++|.+..... .......+|+.++++++|||||.+.+.+. .++.
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvr--hk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~----~~~~ 77 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVR--HKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFE----EDGQ 77 (426)
T ss_pred chhhhhhhcCccccchhhhhh--hccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchh----cCCc
Confidence 578899999999999999988 555677999999875542 22346789999999999999999999852 3333
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCc
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGL 316 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 316 (484)
..+|||+||+||++.+.+...+ +..+++..++.++.|++.|+.||| ++.|+|||||+.|||++.+..+||+|||+
T Consensus 78 ~l~Ivm~Y~eGg~l~~~i~~~k--~~~f~E~~i~~~~~Q~~~av~ylH---~~~iLHRDlK~~Nifltk~~~VkLgDfGl 152 (426)
T KOG0589|consen 78 LLCIVMEYCEGGDLAQLIKEQK--GVLFPEERILKWFVQILLAVNYLH---ENRVLHRDLKCANIFLTKDKKVKLGDFGL 152 (426)
T ss_pred eEEEEEeecCCCCHHHHHHHHh--hccccHHHHHHHHHHHHHHHHHHH---hhhhhcccchhhhhhccccCceeecchhh
Confidence 4999999999999999998655 456999999999999999999999 99999999999999999999999999999
Q ss_pred ccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcc
Q 011508 317 AKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALP 396 (484)
Q Consensus 317 a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 396 (484)
|+.+.... .......||+.|++||++.+.+|..|+||||+||++|||++-+++|...... ..+....+
T Consensus 153 aK~l~~~~-------~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~-----~Li~ki~~ 220 (426)
T KOG0589|consen 153 AKILNPED-------SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMS-----ELILKINR 220 (426)
T ss_pred hhhcCCch-------hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchH-----HHHHHHhh
Confidence 99875432 2334567999999999999999999999999999999999999999764222 12211111
Q ss_pred hhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 397 ERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 397 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
..+++. +.....++..++..|++.+|..||++.+++.+
T Consensus 221 ----~~~~Pl------------------------p~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 221 ----GLYSPL------------------------PSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred ----ccCCCC------------------------CccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 111111 22236789999999999999999999999987
No 67
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=1.4e-40 Score=316.05 Aligned_cols=275 Identities=23% Similarity=0.291 Sum_probs=196.1
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
++|++.+.||+|+||.||+|+. ..++..||+|+++.... .....+.+|+.++++++||||+++++++ ..+..
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~--~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-----~~~~~ 77 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRS--KLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDII-----HTERC 77 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEE--CCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEE-----cCCCe
Confidence 5799999999999999999984 44578899999875432 2345678999999999999999999984 34457
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
.++||||++ ++|.+++... ...+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||++
T Consensus 78 ~~lv~e~~~-~~l~~~l~~~---~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~ 150 (288)
T cd07871 78 LTLVFEYLD-SDLKQYLDNC---GNLMSMHNVKIFMFQLLRGLSYCH---KRKILHRDLKPQNLLINEKGELKLADFGLA 150 (288)
T ss_pred EEEEEeCCC-cCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEECcCcce
Confidence 899999996 5999988643 234788999999999999999999 899999999999999999999999999998
Q ss_pred cccccccccCCCCccccccccccccccCccccCC-CCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhh--
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEA-- 394 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~-- 394 (484)
+...... .......++..|+|||++.+ ..++.++||||+||++|||+||+.||....... .+.......
T Consensus 151 ~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~~ 222 (288)
T cd07871 151 RAKSVPT-------KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKE-ELHLIFRLLGT 222 (288)
T ss_pred eeccCCC-------ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCC
Confidence 7543211 11123457899999998765 568999999999999999999999997532211 111111100
Q ss_pred -cchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 395 -LPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 395 -~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
.++....+.+..-......... ... +.. ........+..+++.+||+.||.+|||++|+++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~--~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 223 PTEETWPGITSNEEFRSYLFPQY-RAQ---PLI--NHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred CChHHhhccccchhhhccccCcc-CCC---chH--HhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0000111110000000000000 000 000 000122456789999999999999999999975
No 68
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=5.3e-41 Score=339.83 Aligned_cols=255 Identities=20% Similarity=0.233 Sum_probs=200.4
Q ss_pred CCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCceee
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFEA 239 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 239 (484)
.|.+.+.||+|++|.||+|..... .+..||+|.+..........+.+|+.+++.++||||+++++++.. ++..+
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~-~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~-----~~~~~ 141 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSD-PKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKS-----DDKLL 141 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCC-CCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEE-----CCEEE
Confidence 488899999999999999984432 256788887765544445667889999999999999999998643 45889
Q ss_pred EEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcccc
Q 011508 240 LVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKF 319 (484)
Q Consensus 240 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~ 319 (484)
+||||+++|+|.++++........+++..+..++.|++.||.||| +++|+||||||+||+++.++.+||+|||+++.
T Consensus 142 lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~ 218 (478)
T PTZ00267 142 LIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVH---SRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQ 218 (478)
T ss_pred EEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCcCHHhEEECCCCcEEEEeCcCcee
Confidence 999999999999998754434456899999999999999999999 89999999999999999999999999999986
Q ss_pred cccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchhh
Q 011508 320 LPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPERL 399 (484)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 399 (484)
+..... ........||+.|+|||++.+..++.++|||||||++|||++|+.||..... ..........
T Consensus 219 ~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~-----~~~~~~~~~~-- 286 (478)
T PTZ00267 219 YSDSVS-----LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ-----REIMQQVLYG-- 286 (478)
T ss_pred cCCccc-----cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHhC--
Confidence 643211 1112335689999999999999999999999999999999999999964211 1111110000
Q ss_pred hhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 400 AEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 400 ~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
..++. +..+..++.+++..||+.||++||++.+++.
T Consensus 287 --~~~~~------------------------~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 287 --KYDPF------------------------PCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred --CCCCC------------------------CccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 00000 1122557899999999999999999999975
No 69
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=1.1e-40 Score=321.14 Aligned_cols=262 Identities=24% Similarity=0.395 Sum_probs=202.9
Q ss_pred CCCCccCccccccceeEEEEEEcCCCC--eeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDH--ETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~--~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
.+|++.+.||+|+||.||+|++...+. ...||+|.++.... ...+.+.+|+.+++.++||||++++++|..
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~------ 80 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT------ 80 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcC------
Confidence 468999999999999999998654322 34589999875432 334678899999999999999999998743
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
...++|+||+++|+|.+++.... ..+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||
T Consensus 81 ~~~~~v~e~~~~g~l~~~l~~~~---~~~~~~~~~~~~~qi~~~L~~LH---~~~iiH~dlkp~Nill~~~~~~kl~DfG 154 (316)
T cd05108 81 STVQLITQLMPFGCLLDYVREHK---DNIGSQYLLNWCVQIAKGMNYLE---ERRLVHRDLAARNVLVKTPQHVKITDFG 154 (316)
T ss_pred CCceeeeecCCCCCHHHHHHhcc---ccCCHHHHHHHHHHHHHHHHHHH---hcCeeccccchhheEecCCCcEEEcccc
Confidence 24579999999999999997432 35889999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhh
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEA 394 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~ 394 (484)
+++......... ......++..|+|||++.+..++.++|||||||++|||++ |+.||.+.... .+.....
T Consensus 155 ~a~~~~~~~~~~-----~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~--~~~~~~~-- 225 (316)
T cd05108 155 LAKLLGADEKEY-----HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISSILE-- 225 (316)
T ss_pred ccccccCCCcce-----eccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHh--
Confidence 998764322110 1112234678999999999999999999999999999998 99998653111 0111100
Q ss_pred cchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHHHH
Q 011508 395 LPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRNKL 470 (484)
Q Consensus 395 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~ 470 (484)
..... ..+..|...+.+++..||+.+|++||++.+++..+..+....
T Consensus 226 ----------~~~~~-------------------~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~ 272 (316)
T cd05108 226 ----------KGERL-------------------PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 272 (316)
T ss_pred ----------CCCCC-------------------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCC
Confidence 00000 001223567889999999999999999999999998876543
No 70
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=8.7e-41 Score=319.90 Aligned_cols=279 Identities=23% Similarity=0.325 Sum_probs=196.5
Q ss_pred hcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
..++|.+.+.||+|+||.||+|+. ..+++.||+|++..... .....+.+|+.+++.++||||+++++++ ..+
T Consensus 3 ~~~~y~~~~~lg~G~~g~V~~~~~--~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-----~~~ 75 (303)
T cd07869 3 KADSYEKLEKLGEGSYATVYKGKS--KVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDII-----HTK 75 (303)
T ss_pred ccccceEeeeEEecCCEEEEEEEE--CCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEE-----ecC
Confidence 457899999999999999999984 34578899999875432 2234678899999999999999999985 345
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
...++||||+ .++|.+++... ...+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||
T Consensus 76 ~~~~lv~e~~-~~~l~~~~~~~---~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg 148 (303)
T cd07869 76 ETLTLVFEYV-HTDLCQYMDKH---PGGLHPENVKLFLFQLLRGLSYIH---QRYILHRDLKPQNLLISDTGELKLADFG 148 (303)
T ss_pred CeEEEEEECC-CcCHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECCCC
Confidence 5889999999 57888888643 235888999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCC-CCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhh
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEA 394 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 394 (484)
++....... .......+++.|+|||++.+ ..++.++||||+||++|||++|+.||.........+.......
T Consensus 149 ~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 221 (303)
T cd07869 149 LARAKSVPS-------HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVL 221 (303)
T ss_pred cceeccCCC-------ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHh
Confidence 987542211 11123457899999998765 4578899999999999999999999976422111111111100
Q ss_pred cch---hhhhhc-CcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 395 LPE---RLAEIV-DPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 395 ~~~---~~~~~~-d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
... ...... .+....+.... .... ..............+.+++..|++.||++|||++|+++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 222 GTPNEDTWPGVHSLPHFKPERFTL-YSPK----NLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred CCCChhhccchhhccccccccccc-cCCc----cHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 000 000000 00000000000 0000 00000000111356789999999999999999999985
No 71
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=2.6e-40 Score=310.60 Aligned_cols=259 Identities=26% Similarity=0.423 Sum_probs=203.3
Q ss_pred CCCCccCccccccceeEEEEEEcCC-CCeeEEEEEEeeccCcc-chHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCc
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHD-DHETLVAVKVLNLQHRG-ASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~-~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
++|++.+.||+|+||.||+|.+... .....||+|.++..... ....+.+|+.++++++|+||+++++++ ..+.
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~ 78 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVV-----TKSR 78 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEE-----ecCC
Confidence 5688999999999999999997543 23568999998754332 345788999999999999999999985 3445
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCc
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGL 316 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 316 (484)
..++||||+++++|.+++.... ..+++..++.++.|++.||+||| +++|+||||||+||++++++.++|+|||+
T Consensus 79 ~~~iv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~Lh---~~~i~H~di~p~nili~~~~~~~l~dfg~ 152 (266)
T cd05033 79 PVMIITEYMENGSLDKFLREND---GKFTVGQLVGMLRGIASGMKYLS---EMNYVHRDLAARNILVNSNLVCKVSDFGL 152 (266)
T ss_pred ceEEEEEcCCCCCHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCCEEECccch
Confidence 7899999999999999997432 35899999999999999999999 89999999999999999999999999999
Q ss_pred ccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhhc
Q 011508 317 AKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEAL 395 (484)
Q Consensus 317 a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 395 (484)
+......... .......++..|+|||.+.+..++.++||||||+++|||++ |..||...... ...+.+.
T Consensus 153 ~~~~~~~~~~-----~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~--~~~~~~~--- 222 (266)
T cd05033 153 SRRLEDSEAT-----YTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ--DVIKAVE--- 222 (266)
T ss_pred hhcccccccc-----eeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHH--HHHHHHH---
Confidence 9876421111 11112235678999999998899999999999999999998 99998653211 1111110
Q ss_pred chhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHH
Q 011508 396 PERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSF 466 (484)
Q Consensus 396 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i 466 (484)
+..... .+..++..+.+++.+|++.+|++||++.||++.|+++
T Consensus 223 --------~~~~~~--------------------~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 223 --------DGYRLP--------------------PPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred --------cCCCCC--------------------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 000000 0122356789999999999999999999999999875
No 72
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=1.1e-40 Score=321.71 Aligned_cols=243 Identities=23% Similarity=0.290 Sum_probs=191.1
Q ss_pred CccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCceeeEE
Q 011508 165 NLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFEALV 241 (484)
Q Consensus 165 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 241 (484)
+.||+|+||.||++.. ..++..||+|+++... ......+.+|+++++.++||||+++++++ ..++..++|
T Consensus 1 ~~lG~G~~g~Vy~~~~--~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~-----~~~~~~~lv 73 (323)
T cd05595 1 KLLGKGTFGKVILVRE--KATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAF-----QTHDRLCFV 73 (323)
T ss_pred CeeeeCCCEEEEEEEE--CCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEE-----ecCCEEEEE
Confidence 4699999999999984 4467889999997542 22345677899999999999999999885 344588999
Q ss_pred eecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcccccc
Q 011508 242 YELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFLP 321 (484)
Q Consensus 242 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~~ 321 (484)
|||+++|+|..++... ..+++..++.++.||+.||+||| +++|+||||||+||+++.++.+||+|||++....
T Consensus 74 ~E~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~ 146 (323)
T cd05595 74 MEYANGGELFFHLSRE----RVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI 146 (323)
T ss_pred EeCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEEcCCCCEEecccHHhcccc
Confidence 9999999999888643 35889999999999999999999 8999999999999999999999999999987532
Q ss_pred cccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchhhhh
Q 011508 322 EAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPERLAE 401 (484)
Q Consensus 322 ~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (484)
... .......|++.|+|||++.+..++.++|||||||++|||++|+.||...... .....
T Consensus 147 ~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~-----~~~~~-------- 206 (323)
T cd05595 147 SDG-------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-----RLFEL-------- 206 (323)
T ss_pred CCC-------CccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHH-----HHHHH--------
Confidence 111 1112346899999999999989999999999999999999999999653111 11110
Q ss_pred hcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCC-----CHHHHHHH
Q 011508 402 IVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERM-----NMEEVAAQ 462 (484)
Q Consensus 402 ~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~ 462 (484)
+....... +..+..++.+++.+||+.||++|| ++.++++.
T Consensus 207 ~~~~~~~~---------------------p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h 251 (323)
T cd05595 207 ILMEEIRF---------------------PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 251 (323)
T ss_pred HhcCCCCC---------------------CCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcC
Confidence 00000000 112256788999999999999998 88888753
No 73
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=3.9e-40 Score=310.61 Aligned_cols=265 Identities=26% Similarity=0.433 Sum_probs=203.1
Q ss_pred CCccCccccccceeEEEEEEcCCC-CeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCCCCceeEeeeeeeecc-CCCc
Q 011508 161 FSLENLIGAGSFGSVYKGIFDHDD-HETLVAVKVLNLQHR--GASKSFIAECQALRSIRHRNLVKIITSCVSVDF-QGND 236 (484)
Q Consensus 161 ~~~~~~lg~G~~g~Vy~~~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~-~~~~ 236 (484)
|.+.+.||+|+||.||+|....+. ....||+|+++.... .....+.+|++.++.++|+||+++++++..... ....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 567899999999999999875432 457899999875432 233578899999999999999999998754332 2234
Q ss_pred eeeEEeecccCCCHHHHHhhcC--CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEccc
Q 011508 237 FEALVYELMVNGSLEEWLHLNR--DAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDF 314 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 314 (484)
..++|+||+++|+|..++.... .....+++..++.++.|++.||+||| +.+++||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLS---NRNFIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchheEEECCCCeEEECCc
Confidence 5789999999999999986432 12346899999999999999999999 899999999999999999999999999
Q ss_pred CcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHh
Q 011508 315 GLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKE 393 (484)
Q Consensus 315 g~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~ 393 (484)
|.++........ ........+..|+|||.+.+..++.++|||||||++|||++ |..||...... .+.+..
T Consensus 158 g~~~~~~~~~~~-----~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~--~~~~~~-- 228 (273)
T cd05035 158 GLSKKIYSGDYY-----RQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH--EIYDYL-- 228 (273)
T ss_pred cceeeccccccc-----cccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHH--
Confidence 999866432211 01111234678999999988889999999999999999999 88888653211 111111
Q ss_pred hcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHH
Q 011508 394 ALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSF 466 (484)
Q Consensus 394 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i 466 (484)
.+..... .+..++.++.+++.+||+.||++|||+.||++.|+++
T Consensus 229 ---------~~~~~~~--------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 229 ---------RHGNRLK--------------------QPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred ---------HcCCCCC--------------------CCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 1000000 0122366789999999999999999999999999875
No 74
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=1.5e-40 Score=321.40 Aligned_cols=243 Identities=25% Similarity=0.303 Sum_probs=191.9
Q ss_pred CccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCceeeEE
Q 011508 165 NLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFEALV 241 (484)
Q Consensus 165 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 241 (484)
+.||+|+||.||++.. ..++..||+|++.... ......+.+|+.+++.++||||+++++++ ..++..++|
T Consensus 1 ~~lG~G~~g~Vy~~~~--~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~~~~lv 73 (328)
T cd05593 1 KLLGKGTFGKVILVRE--KASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSF-----QTKDRLCFV 73 (328)
T ss_pred CeeeeCCCEEEEEEEE--CCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEE-----EcCCEEEEE
Confidence 4699999999999984 4467889999997542 22345778899999999999999999874 445588999
Q ss_pred eecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcccccc
Q 011508 242 YELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFLP 321 (484)
Q Consensus 242 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~~ 321 (484)
|||+++|+|.+++... ..+++.++..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+++...
T Consensus 74 ~Ey~~~g~L~~~l~~~----~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~ 146 (328)
T cd05593 74 MEYVNGGELFFHLSRE----RVFSEDRTRFYGAEIVSALDYLH---SGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGI 146 (328)
T ss_pred EeCCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeEECCCCcEEEecCcCCccCC
Confidence 9999999999988643 35889999999999999999999 8999999999999999999999999999987532
Q ss_pred cccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchhhhh
Q 011508 322 EAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPERLAE 401 (484)
Q Consensus 322 ~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (484)
... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ..........
T Consensus 147 ~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~-----~~~~~~~~~~---- 210 (328)
T cd05593 147 TDA-------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-----EKLFELILME---- 210 (328)
T ss_pred Ccc-------cccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCH-----HHHHHHhccC----
Confidence 211 112234689999999999988999999999999999999999999965311 1111110000
Q ss_pred hcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCC-----CHHHHHHH
Q 011508 402 IVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERM-----NMEEVAAQ 462 (484)
Q Consensus 402 ~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~ 462 (484)
+..+ +.....++.+++.+||+.||++|| ++.|+++.
T Consensus 211 --~~~~-----------------------p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 211 --DIKF-----------------------PRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred --CccC-----------------------CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 0000 112255688999999999999997 89998864
No 75
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=5.8e-40 Score=312.37 Aligned_cols=265 Identities=29% Similarity=0.435 Sum_probs=206.1
Q ss_pred CCCCccCccccccceeEEEEEEcC---CCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDH---DDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~---~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
.+|.+.+.||+|+||.||+|.... ..+...+++|.+........+.+.+|++++++++|+||+++++++. ..
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~ 79 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCG-----DG 79 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEc-----cC
Confidence 357888999999999999998543 2245678999887655444567899999999999999999999864 34
Q ss_pred ceeeEEeecccCCCHHHHHhhcCC------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeee
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRD------------APRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLL 303 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll 303 (484)
...++||||+++++|.+++..... ....+++..++.++.|++.||+||| +++|+||||||+||++
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~Nil~ 156 (291)
T cd05094 80 DPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLA---SQHFVHRDLATRNCLV 156 (291)
T ss_pred CceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccCcceEEE
Confidence 578999999999999999975431 1234899999999999999999999 8999999999999999
Q ss_pred cCCCceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCcc
Q 011508 304 DGELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFT 382 (484)
Q Consensus 304 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~ 382 (484)
+.++.++|+|||++........ ........++..|+|||.+.+..++.++|||||||++|||+| |+.||.....
T Consensus 157 ~~~~~~~l~dfg~a~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 231 (291)
T cd05094 157 GANLLVKIGDFGMSRDVYSTDY-----YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSN 231 (291)
T ss_pred ccCCcEEECCCCcccccCCCce-----eecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 9999999999999876533211 111122346788999999988899999999999999999999 9999865321
Q ss_pred CCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 383 GNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
. ..... +....... .+..++..+.+++.+||+.+|++|||+.+|+++
T Consensus 232 ~-----~~~~~--------~~~~~~~~--------------------~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~ 278 (291)
T cd05094 232 T-----EVIEC--------ITQGRVLE--------------------RPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKI 278 (291)
T ss_pred H-----HHHHH--------HhCCCCCC--------------------CCccCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 1 11110 00000000 011225678999999999999999999999999
Q ss_pred HHHHHHH
Q 011508 463 LLSFRNK 469 (484)
Q Consensus 463 L~~i~~~ 469 (484)
|+++...
T Consensus 279 l~~~~~~ 285 (291)
T cd05094 279 LHALGKA 285 (291)
T ss_pred HHHHHhh
Confidence 9998653
No 76
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=2.6e-40 Score=310.06 Aligned_cols=256 Identities=25% Similarity=0.444 Sum_probs=201.2
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCcee
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFE 238 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 238 (484)
.+|++.+.||+|+||.||+|.+.. .++.||+|.+.... .....+.+|++++++++|+||+++++++. .+...
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~--~~~~~~~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~ 77 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKK--YSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCT-----REPPF 77 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEec--CCceEEEEEecCCc-hHHHHHHHHHHHHHhCCCCChhheEEEEc-----CCCCc
Confidence 357788999999999999999653 46789999987442 33467889999999999999999999864 34478
Q ss_pred eEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccc
Q 011508 239 ALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAK 318 (484)
Q Consensus 239 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~ 318 (484)
++||||+++++|.+++.... ...+++..++.++.|++.||+||| +++++||||||+||++++++.+||+|||.+.
T Consensus 78 ~lv~e~~~~~~L~~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~df~~~~ 152 (263)
T cd05052 78 YIITEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSR 152 (263)
T ss_pred EEEEEeCCCCcHHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccCcceEEEcCCCcEEeCCCcccc
Confidence 99999999999999997432 345899999999999999999999 8999999999999999999999999999988
Q ss_pred ccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhhcch
Q 011508 319 FLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEALPE 397 (484)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 397 (484)
....... .......++..|+|||.+.+..++.++|||||||++|||++ |..||..... .+....
T Consensus 153 ~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~-----~~~~~~---- 217 (263)
T cd05052 153 LMTGDTY------TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-----SQVYEL---- 217 (263)
T ss_pred cccccee------eccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH-----HHHHHH----
Confidence 6543211 11111234568999999988899999999999999999998 9999865311 111111
Q ss_pred hhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHH
Q 011508 398 RLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSF 466 (484)
Q Consensus 398 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i 466 (484)
+......+ .+..++.++.+++.+||+.+|++|||+.|++++|+.+
T Consensus 218 -----~~~~~~~~-------------------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 218 -----LEKGYRME-------------------RPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred -----HHCCCCCC-------------------CCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 00000000 0122366789999999999999999999999999865
No 77
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.7e-40 Score=336.25 Aligned_cols=265 Identities=21% Similarity=0.252 Sum_probs=205.9
Q ss_pred HHhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCCCCceeEeeeeeeecc
Q 011508 155 FKATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIRHRNLVKIITSCVSVDF 232 (484)
Q Consensus 155 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 232 (484)
....++|.+.+.||+|+||+||+|+. ..+++.||||++..... .....+.+|+..+..++|+|++++...+...+.
T Consensus 28 ~~~~~rY~i~~~LG~G~fG~Vy~a~~--~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~ 105 (496)
T PTZ00283 28 KEQAKKYWISRVLGSGATGTVLCAKR--VSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDP 105 (496)
T ss_pred cccCCCEEEEEEEecCCCEEEEEEEE--cCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccc
Confidence 34557999999999999999999984 34578999999875432 234567889999999999999998876543221
Q ss_pred C---CCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCce
Q 011508 233 Q---GNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTA 309 (484)
Q Consensus 233 ~---~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~ 309 (484)
. .....++||||+++|+|.+++.........+++..+..++.|++.||.||| +++|+||||||+||+++.++.+
T Consensus 106 ~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH---~~~IiHrDLKP~NILl~~~~~v 182 (496)
T PTZ00283 106 RNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVH---SKHMIHRDIKSANILLCSNGLV 182 (496)
T ss_pred cCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEeCCCCE
Confidence 1 112467999999999999999865555567999999999999999999999 8999999999999999999999
Q ss_pred EEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhH
Q 011508 310 HVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHN 389 (484)
Q Consensus 310 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~ 389 (484)
||+|||+++.+..... ........||+.|+|||++.+..++.++|||||||++|||++|+.||.... ...
T Consensus 183 kL~DFGls~~~~~~~~-----~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~-----~~~ 252 (496)
T PTZ00283 183 KLGDFGFSKMYAATVS-----DDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGEN-----MEE 252 (496)
T ss_pred EEEecccCeecccccc-----ccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC-----HHH
Confidence 9999999986533211 111223568999999999999999999999999999999999999996531 111
Q ss_pred HHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 390 FVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 390 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
........ ..++ .+..++.++.+++..||+.||++||++.++++.
T Consensus 253 ~~~~~~~~----~~~~------------------------~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 253 VMHKTLAG----RYDP------------------------LPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred HHHHHhcC----CCCC------------------------CCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 11111100 0000 012235678999999999999999999999864
No 78
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=2.7e-40 Score=309.68 Aligned_cols=255 Identities=26% Similarity=0.435 Sum_probs=200.3
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
.++|++.++||+|+||.||+|... ++..||+|.+.... ...+.+.+|+.+++.++|+||+++++.+ .....
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~---~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~ 75 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYN---NSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVV-----TKEEP 75 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEec---CCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEE-----cCCCC
Confidence 357889999999999999999854 34679999876433 2356889999999999999999999884 34457
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
.++||||+++++|.+++.... ...+++..++.++.|++.||+||| +.+++||||||+||+++.++.++|+|||.+
T Consensus 76 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~~l~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~ 150 (261)
T cd05072 76 IYIITEYMAKGSLLDFLKSDE--GGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLA 150 (261)
T ss_pred cEEEEecCCCCcHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhhEEecCCCcEEECCCccc
Confidence 899999999999999997532 345888999999999999999999 899999999999999999999999999999
Q ss_pred cccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhhcc
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEALP 396 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 396 (484)
........ .......++..|+|||+.....++.++|||||||++|+|+| |+.||...... .....+..
T Consensus 151 ~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~--~~~~~~~~--- 219 (261)
T cd05072 151 RVIEDNEY------TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNS--DVMSALQR--- 219 (261)
T ss_pred eecCCCce------eccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHH--HHHHHHHc---
Confidence 86533211 11112335678999999988889999999999999999998 99998653211 11111100
Q ss_pred hhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHH
Q 011508 397 ERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLS 465 (484)
Q Consensus 397 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 465 (484)
... .. ....++.++.+++.+|++.+|++||+++++.+.|++
T Consensus 220 -----~~~----~~-------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 220 -----GYR----MP-------------------RMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred -----CCC----CC-------------------CCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 000 00 011225578899999999999999999999999975
No 79
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=3.1e-40 Score=311.13 Aligned_cols=265 Identities=26% Similarity=0.440 Sum_probs=201.0
Q ss_pred CCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC--ccchHHHHHHHHHHHcCCCCCceeEeeeeeeecc-CCCce
Q 011508 161 FSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH--RGASKSFIAECQALRSIRHRNLVKIITSCVSVDF-QGNDF 237 (484)
Q Consensus 161 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~-~~~~~ 237 (484)
|.+.+.||+|+||.||+|.+........+|+|.++... ....+.+.+|+++++.++|+||++++++|..... .....
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 45678999999999999997655444579999887542 3334678899999999999999999998754321 12235
Q ss_pred eeEEeecccCCCHHHHHhhcC--CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 238 EALVYELMVNGSLEEWLHLNR--DAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
.+++|||+++|+|.+++.... .....+++..+..++.|++.||+||| +++|+||||||+||++++++.+||+|||
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg 157 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLS---SKSFIHRDLAARNCMLNENMNVCVADFG 157 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhheEEcCCCCEEECCCC
Confidence 689999999999999885332 22345899999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhh
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEA 394 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~ 394 (484)
+++........ .......++..|+|||...+..++.++||||||+++|||++ |+.||...... .+.+.+.
T Consensus 158 ~~~~~~~~~~~-----~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~~~~~-- 228 (272)
T cd05075 158 LSKKIYNGDYY-----RQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENS--EIYDYLR-- 228 (272)
T ss_pred cccccCcccce-----ecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHH--
Confidence 99876432110 01112235678999999998899999999999999999999 88898652111 1111100
Q ss_pred cchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHH
Q 011508 395 LPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSF 466 (484)
Q Consensus 395 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i 466 (484)
...... .+..++..+.+++.+||+.||++|||+.|+++.|+++
T Consensus 229 ---------~~~~~~--------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 229 ---------QGNRLK--------------------QPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred ---------cCCCCC--------------------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 000000 0112356789999999999999999999999999864
No 80
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=1.1e-40 Score=323.29 Aligned_cols=247 Identities=23% Similarity=0.317 Sum_probs=196.3
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
++|.+.+.||+|+||.||+|.+... ....||+|++.... ....+.+.+|+.+++.++||||+++++++. .+
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~-----~~ 103 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNE-DFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFK-----DE 103 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECC-CCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEE-----eC
Confidence 5688999999999999999986432 24689999986432 233456889999999999999999999854 44
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
...++||||+++|+|.+++... ..+++..+..++.|++.||+||| +++|+||||||+|||++.++.+||+|||
T Consensus 104 ~~~~lv~Ey~~~g~L~~~i~~~----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~ikL~DFG 176 (340)
T PTZ00426 104 SYLYLVLEFVIGGEFFTFLRRN----KRFPNDVGCFYAAQIVLIFEYLQ---SLNIVYRDLKPENLLLDKDGFIKMTDFG 176 (340)
T ss_pred CEEEEEEeCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEccCCCHHHEEECCCCCEEEecCC
Confidence 5889999999999999999743 35889999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhc
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEAL 395 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 395 (484)
++...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...... ....
T Consensus 177 ~a~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~-----~~~~--- 238 (340)
T PTZ00426 177 FAKVVDTR----------TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPL-----LIYQ--- 238 (340)
T ss_pred CCeecCCC----------cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHH-----HHHH---
Confidence 99865321 12346899999999998888999999999999999999999999753110 0001
Q ss_pred chhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCC-----CHHHHHHH
Q 011508 396 PERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERM-----NMEEVAAQ 462 (484)
Q Consensus 396 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~ 462 (484)
.+.+..... +......+.+++.+|++.||++|+ +++|+++.
T Consensus 239 -----~i~~~~~~~---------------------p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 239 -----KILEGIIYF---------------------PKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred -----HHhcCCCCC---------------------CCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 111110000 111244578999999999999995 88888764
No 81
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=3.8e-40 Score=314.52 Aligned_cols=265 Identities=26% Similarity=0.392 Sum_probs=204.1
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC-ccchHHHHHHHHHHHcC-CCCCceeEeeeeeeeccCCCc
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH-RGASKSFIAECQALRSI-RHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 236 (484)
++|++.+.||+|+||.||+|...+.+....+++|.++... ....+.+.+|++++.++ +||||+++++++. ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~-----~~~ 76 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACE-----NRG 76 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEc-----cCC
Confidence 5788999999999999999987655444567888887432 23346788999999999 7999999999853 344
Q ss_pred eeeEEeecccCCCHHHHHhhcCC------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeec
Q 011508 237 FEALVYELMVNGSLEEWLHLNRD------------APRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLD 304 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~ 304 (484)
..++|+||+++++|.+++..... ....+++..++.++.|++.||+||| +++|+||||||+||+++
T Consensus 77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nill~ 153 (297)
T cd05089 77 YLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLS---EKQFIHRDLAARNVLVG 153 (297)
T ss_pred cceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCcCCcceEEEC
Confidence 78999999999999999975321 1235889999999999999999999 89999999999999999
Q ss_pred CCCceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccC
Q 011508 305 GELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTG 383 (484)
Q Consensus 305 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~ 383 (484)
+++.+||+|||++....... .......+..|+|||+..+..++.++|||||||++|||++ |..||.....
T Consensus 154 ~~~~~kl~dfg~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~- 224 (297)
T cd05089 154 ENLASKIADFGLSRGEEVYV--------KKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTC- 224 (297)
T ss_pred CCCeEEECCcCCCcccccee--------ccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH-
Confidence 99999999999986432110 0111123567999999988889999999999999999997 9999965321
Q ss_pred CccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHH
Q 011508 384 NLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQL 463 (484)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 463 (484)
....... ....... .+..++..+.+++.+||+.+|.+|||+.++++.|
T Consensus 225 ----~~~~~~~---------~~~~~~~-------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l 272 (297)
T cd05089 225 ----AELYEKL---------PQGYRME-------------------KPRNCDDEVYELMRQCWRDRPYERPPFAQISVQL 272 (297)
T ss_pred ----HHHHHHH---------hcCCCCC-------------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 1111110 0000000 0122356789999999999999999999999999
Q ss_pred HHHHHHHhh
Q 011508 464 LSFRNKLVK 472 (484)
Q Consensus 464 ~~i~~~~~~ 472 (484)
+.+.+....
T Consensus 273 ~~~~~~~~~ 281 (297)
T cd05089 273 SRMLEARKA 281 (297)
T ss_pred HHHHHhhcc
Confidence 998876643
No 82
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=3.4e-40 Score=310.03 Aligned_cols=261 Identities=23% Similarity=0.328 Sum_probs=204.8
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc---cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR---GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
++|++.+.||+|++|.||+|.. ..++..+|+|.+..... .....+.+|+.+++.++|+||+++++++.. +
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~--~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-----~ 74 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATC--LLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIE-----D 74 (267)
T ss_pred chhhhhhhhcccCCeEEEEEee--cCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEe-----C
Confidence 4688889999999999999984 33568899998764322 233578899999999999999999998643 4
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
+..+++|||+++++|.+++.........+++..++.++.|++.||+||| +++++|+||||+||+++.++.++|+|||
T Consensus 75 ~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~dfg 151 (267)
T cd08229 75 NELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLG 151 (267)
T ss_pred CeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEECcch
Confidence 4789999999999999998754444456899999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhc
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEAL 395 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 395 (484)
.+....... .......++..|+|||.+.+..++.++||||||+++|+|++|..||.....+. .....
T Consensus 152 ~~~~~~~~~-------~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~---~~~~~--- 218 (267)
T cd08229 152 LGRFFSSKT-------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL---YSLCK--- 218 (267)
T ss_pred hhhccccCC-------cccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchH---HHHhh---
Confidence 987653321 11122458889999999988889999999999999999999999986432111 11110
Q ss_pred chhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHH
Q 011508 396 PERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSF 466 (484)
Q Consensus 396 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i 466 (484)
.+.....+.. ....++..+.+++.+||+.||++|||+.+|++.++++
T Consensus 219 --~~~~~~~~~~----------------------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 219 --KIEQCDYPPL----------------------PSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred --hhhcCCCCCC----------------------CcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence 0000000000 0122356789999999999999999999999999875
No 83
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=6.5e-40 Score=308.07 Aligned_cols=262 Identities=24% Similarity=0.330 Sum_probs=206.3
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
++|++.+.||+|+||.||+|... .+++.||+|.++... ....+.+.+|++++++++|+|++++++++. .+
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~--~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~-----~~ 74 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICL--LDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFI-----EN 74 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEc--CCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeee-----cC
Confidence 57899999999999999999954 356789999886432 223467889999999999999999999864 34
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
+..++||||+++++|.+++.........+++.+++.++.|++.||+||| +.+++||||+|+||+++.++.++|+|||
T Consensus 75 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~nil~~~~~~~~l~d~~ 151 (267)
T cd08224 75 NELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMH---SKRIMHRDIKPANVFITATGVVKLGDLG 151 (267)
T ss_pred CeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHH---hCCEecCCcChhhEEECCCCcEEEeccc
Confidence 5789999999999999999765444556899999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhc
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEAL 395 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 395 (484)
.+....... .......++..|+|||.+.+..++.++|||||||++|+|++|+.||..... ...+......
T Consensus 152 ~~~~~~~~~-------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~ 221 (267)
T cd08224 152 LGRFFSSKT-------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM---NLYSLCKKIE 221 (267)
T ss_pred eeeeccCCC-------cccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCc---cHHHHHhhhh
Confidence 987653221 111223578899999999888899999999999999999999999864321 1111111100
Q ss_pred chhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHH
Q 011508 396 PERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFR 467 (484)
Q Consensus 396 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~ 467 (484)
...... .....+...+.+++..||+.+|++|||+.+|+++|+.+.
T Consensus 222 --------~~~~~~-------------------~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 222 --------KCDYPP-------------------LPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred --------cCCCCC-------------------CChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 000000 001123557889999999999999999999999998874
No 84
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=4.8e-40 Score=307.00 Aligned_cols=251 Identities=28% Similarity=0.422 Sum_probs=195.6
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCcee
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFE 238 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 238 (484)
++|++.+.||+|+||.||+|.+. .+..+|+|.+.... .....+.+|++++++++||||+++++++. .....
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~---~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~ 74 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWR---AQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCT-----QQKPL 74 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEec---cCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEc-----cCCCE
Confidence 45788899999999999999865 34579999876432 23467889999999999999999999853 34578
Q ss_pred eEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccc
Q 011508 239 ALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAK 318 (484)
Q Consensus 239 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~ 318 (484)
++||||+++|+|.++++... ..+++..++.++.|++.||+||| +++++||||||+||++++++.+||+|||.++
T Consensus 75 ~iv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~ 148 (256)
T cd05114 75 YIVTEFMENGCLLNYLRQRQ---GKLSKDMLLSMCQDVCEGMEYLE---RNSFIHRDLAARNCLVSSTGVVKVSDFGMTR 148 (256)
T ss_pred EEEEEcCCCCcHHHHHHhCc---cCCCHHHHHHHHHHHHHHHHHHH---HCCccccccCcceEEEcCCCeEEECCCCCcc
Confidence 99999999999999987432 24889999999999999999999 8999999999999999999999999999987
Q ss_pred ccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhhcch
Q 011508 319 FLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEALPE 397 (484)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 397 (484)
....... .......++..|+|||...+..++.++||||||+++|||++ |+.||..... .+........
T Consensus 149 ~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~-----~~~~~~i~~~ 217 (256)
T cd05114 149 YVLDDEY------TSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSN-----YEVVEMISRG 217 (256)
T ss_pred ccCCCce------eccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCH-----HHHHHHHHCC
Confidence 6532211 11112235678999999988889999999999999999999 8999865311 1111110000
Q ss_pred hhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHH
Q 011508 398 RLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQL 463 (484)
Q Consensus 398 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 463 (484)
. .... +......+.+++.+||+.+|++||+++|+++.|
T Consensus 218 ~--~~~~--------------------------~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 218 F--RLYR--------------------------PKLASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred C--CCCC--------------------------CCCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 0 0000 011145689999999999999999999999886
No 85
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=2.5e-40 Score=323.33 Aligned_cols=249 Identities=26% Similarity=0.361 Sum_probs=189.6
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
++|+..+.||+|+||.||+|+.. .+++.||||++..... .....+.+|+++++.++|+||+++++++ ..++.
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~ 146 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHR--PTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMF-----DHNGE 146 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEEC--CCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEe-----ccCCe
Confidence 34567789999999999999843 4578899999865433 2345788999999999999999999984 44558
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
.++||||+++++|.+.. ..++..+..++.||+.||+||| +++|+||||||+|||+++++.+||+|||++
T Consensus 147 ~~lv~e~~~~~~L~~~~--------~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DfG~~ 215 (353)
T PLN00034 147 IQVLLEFMDGGSLEGTH--------IADEQFLADVARQILSGIAYLH---RRHIVHRDIKPSNLLINSAKNVKIADFGVS 215 (353)
T ss_pred EEEEEecCCCCcccccc--------cCCHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCEEEcccccc
Confidence 89999999999986532 2567788899999999999999 899999999999999999999999999999
Q ss_pred cccccccccCCCCccccccccccccccCccccCC-----CCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHH
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-----SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVK 392 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-----~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 392 (484)
+.+.... .......|+..|+|||++.. ...+.++|||||||++|||++|+.||...... .+.....
T Consensus 216 ~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~--~~~~~~~ 286 (353)
T PLN00034 216 RILAQTM-------DPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQG--DWASLMC 286 (353)
T ss_pred eeccccc-------ccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCc--cHHHHHH
Confidence 8653221 11123468999999998743 23456899999999999999999999732111 1111111
Q ss_pred hhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 393 EALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 393 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
..... ..+. .+..+..++.+++.+||+.||++|||+.|+++.
T Consensus 287 ~~~~~-----~~~~-----------------------~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 287 AICMS-----QPPE-----------------------APATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred HHhcc-----CCCC-----------------------CCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000 0000 012235678999999999999999999999875
No 86
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=5.4e-40 Score=306.84 Aligned_cols=251 Identities=28% Similarity=0.427 Sum_probs=196.7
Q ss_pred ccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCceeeEEee
Q 011508 166 LIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFEALVYE 243 (484)
Q Consensus 166 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 243 (484)
.||+|+||.||+|.+....++..+|+|+++.... ...+.+.+|+.+++.++|+||+++++++. .+..++|||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~------~~~~~lv~e 75 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE------AESWMLVME 75 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc------CCCcEEEEe
Confidence 5899999999999876666788999999875432 23467889999999999999999999752 235689999
Q ss_pred cccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcccccccc
Q 011508 244 LMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFLPEA 323 (484)
Q Consensus 244 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~~~~ 323 (484)
|+++++|.+++... ..+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||.+......
T Consensus 76 ~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~ 148 (257)
T cd05116 76 LAELGPLNKFLQKN----KHVTEKNITELVHQVSMGMKYLE---ETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGAD 148 (257)
T ss_pred cCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccchhhEEEcCCCeEEECCCccccccCCC
Confidence 99999999999632 35889999999999999999999 899999999999999999999999999999866432
Q ss_pred cccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhhcchhhhhh
Q 011508 324 ANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEALPERLAEI 402 (484)
Q Consensus 324 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (484)
... ........++..|+|||.+....++.++|||||||++|||++ |+.||...... .+.+.+.
T Consensus 149 ~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~i~---------- 212 (257)
T cd05116 149 ENY----YKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN--EVTQMIE---------- 212 (257)
T ss_pred CCe----eeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHH----------
Confidence 211 011112234678999999888889999999999999999998 99999753211 1111111
Q ss_pred cCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHH
Q 011508 403 VDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSF 466 (484)
Q Consensus 403 ~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i 466 (484)
...... .+..++.++.+++..||+.||++||++.+|.+.|+.+
T Consensus 213 --~~~~~~-------------------~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 213 --SGERME-------------------CPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred --CCCCCC-------------------CCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 000000 0122366789999999999999999999999999753
No 87
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-41 Score=321.45 Aligned_cols=263 Identities=25% Similarity=0.438 Sum_probs=214.8
Q ss_pred HhHHHhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeec
Q 011508 152 QNLFKATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVD 231 (484)
Q Consensus 152 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 231 (484)
++++....+....++||-|.||.||.|+|+. ..-.||||.++.+ ....++|+.|..+|+.++|||+|+++|+|....
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKk--yslTvAVKtLKED-tMeveEFLkEAAvMKeikHpNLVqLLGVCT~Ep 336 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKK--YSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEP 336 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeec--cceeeehhhhhhc-chhHHHHHHHHHHHHhhcCccHHHHhhhhccCC
Confidence 4444445556777899999999999999975 3467999999754 345689999999999999999999999986544
Q ss_pred cCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEE
Q 011508 232 FQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHV 311 (484)
Q Consensus 232 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl 311 (484)
..|||+|||.+|+|.+||++... ..++.-..+.++.||+.|++||. .+++|||||..+|+|+.++..+|+
T Consensus 337 -----PFYIiTEfM~yGNLLdYLRecnr--~ev~avvLlyMAtQIsSaMeYLE---kknFIHRDLAARNCLVgEnhiVKv 406 (1157)
T KOG4278|consen 337 -----PFYIITEFMCYGNLLDYLRECNR--SEVPAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHIVKV 406 (1157)
T ss_pred -----CeEEEEecccCccHHHHHHHhch--hhcchhHHHHHHHHHHHHHHHHH---HhhhhhhhhhhhhccccccceEEe
Confidence 78999999999999999986543 34677778899999999999999 999999999999999999999999
Q ss_pred cccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHH
Q 011508 312 SDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNF 390 (484)
Q Consensus 312 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~ 390 (484)
+|||+++++..+... ..-...-...|.|||-+....++.|+|||+|||+|||+.| |-.||.+. ++.+.
T Consensus 407 ADFGLsRlMtgDTYT------AHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGi-----dlSqV 475 (1157)
T KOG4278|consen 407 ADFGLSRLMTGDTYT------AHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGI-----DLSQV 475 (1157)
T ss_pred eccchhhhhcCCcee------cccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCc-----cHHHH
Confidence 999999988654321 1122335678999999999999999999999999999998 99998763 22221
Q ss_pred HHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHH
Q 011508 391 VKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSF 466 (484)
Q Consensus 391 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i 466 (484)
. +++..-. +...+++|+..+.+||+.||+++|.+||++.|+-+.++.+
T Consensus 476 Y---------~LLEkgy-------------------RM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtm 523 (1157)
T KOG4278|consen 476 Y---------GLLEKGY-------------------RMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETM 523 (1157)
T ss_pred H---------HHHhccc-------------------cccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHH
Confidence 1 1221111 2223788999999999999999999999999999988764
No 88
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=5.4e-40 Score=318.09 Aligned_cols=200 Identities=27% Similarity=0.394 Sum_probs=170.1
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCc
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
.++|++.+.||+|+||.||++.. ..++..+|+|.+..... .....+.+|++++++++|+||++++++|.. ++
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~--~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~ 76 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSH--KPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-----DG 76 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEE--CCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEE-----CC
Confidence 46899999999999999999984 44577899998875432 233578899999999999999999999643 44
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCc
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGL 316 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 316 (484)
..++||||+++++|.+++... ..+++..+..++.|++.||.|||+ ..+|+||||||+||+++.++.+||+|||+
T Consensus 77 ~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~l~~~l~~lH~--~~~ivH~dlkp~Nili~~~~~~kL~Dfg~ 150 (333)
T cd06650 77 EISICMEHMDGGSLDQVLKKA----GRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGV 150 (333)
T ss_pred EEEEEEecCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHh--cCCEEecCCChhhEEEcCCCCEEEeeCCc
Confidence 889999999999999999743 347889999999999999999993 24799999999999999999999999999
Q ss_pred ccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCC
Q 011508 317 AKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNE 379 (484)
Q Consensus 317 a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~ 379 (484)
+....... .....|+..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 151 ~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~ 204 (333)
T cd06650 151 SGQLIDSM---------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPP 204 (333)
T ss_pred chhhhhhc---------cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 87553211 1123588999999999988899999999999999999999999975
No 89
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=8.9e-40 Score=309.11 Aligned_cols=260 Identities=23% Similarity=0.345 Sum_probs=199.1
Q ss_pred CCCCccCccccccceeEEEEEEcCCCC--eeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDH--ETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~--~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
++|++.+.||+|+||.||+|.+...+. ...+++|.+..... ....++..|+.++++++||||+++++++. .
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~------~ 80 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP------G 80 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC------C
Confidence 467888999999999999999753322 23588888754332 22356778888999999999999999852 2
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
...++++||+++|+|.+++.... ..+++..++.++.|++.||+||| +++++||||||+||++++++.+||+|||
T Consensus 81 ~~~~~i~e~~~~gsL~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~lH---~~~iiH~dlkp~nili~~~~~~kl~Dfg 154 (279)
T cd05111 81 ASLQLVTQLSPLGSLLDHVRQHR---DSLDPQRLLNWCVQIAKGMYYLE---EHRMVHRNLAARNILLKSDSIVQIADFG 154 (279)
T ss_pred CccEEEEEeCCCCcHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHH---HCCEeccccCcceEEEcCCCcEEEcCCc
Confidence 24678999999999999997432 35899999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhh
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEA 394 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~ 394 (484)
.++....... ........++..|+|||...+..++.++|||||||++||+++ |+.||.+.... ...+.+.
T Consensus 155 ~~~~~~~~~~-----~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~--~~~~~~~-- 225 (279)
T cd05111 155 VADLLYPDDK-----KYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPH--EVPDLLE-- 225 (279)
T ss_pred cceeccCCCc-----ccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHH--
Confidence 9986533211 111122446778999999988899999999999999999998 99998653211 1111111
Q ss_pred cchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHH
Q 011508 395 LPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRN 468 (484)
Q Consensus 395 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~ 468 (484)
..... ..+..|...+.+++.+||..||++|||+.|+++.|..+..
T Consensus 226 ----------~~~~~-------------------~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~ 270 (279)
T cd05111 226 ----------KGERL-------------------AQPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMAR 270 (279)
T ss_pred ----------CCCcC-------------------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence 00000 0011234567889999999999999999999999988654
No 90
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=6.8e-40 Score=309.67 Aligned_cols=262 Identities=24% Similarity=0.396 Sum_probs=200.7
Q ss_pred hcCCCCccCccccccceeEEEEEEcC---CCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeecc
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDH---DDHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDF 232 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~---~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 232 (484)
.+++|++.+.||+|+||.||+|.... ...+..||+|++..... ....++.+|+.+++.++|+||+++++++
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~----- 78 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV----- 78 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEE-----
Confidence 45679999999999999999998642 23457799998864332 2345688999999999999999999985
Q ss_pred CCCceeeEEeecccCCCHHHHHhhcCCC------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCC
Q 011508 233 QGNDFEALVYELMVNGSLEEWLHLNRDA------PRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGE 306 (484)
Q Consensus 233 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~ 306 (484)
..+...++||||+++++|.+++...... ...+++..++.++.|++.||+||| +.+++||||||+||+++++
T Consensus 79 ~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~vH~dlkp~Nil~~~~ 155 (277)
T cd05062 79 SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAED 155 (277)
T ss_pred cCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCcchheEEEcCC
Confidence 3445789999999999999999753321 234678899999999999999999 8999999999999999999
Q ss_pred CceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCc
Q 011508 307 LTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNL 385 (484)
Q Consensus 307 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~ 385 (484)
+.++|+|||+++........ .......++..|+|||++.+..++.++|||||||++|||++ |..||.....
T Consensus 156 ~~~~l~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~--- 227 (277)
T cd05062 156 FTVKIGDFGMTRDIYETDYY-----RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSN--- 227 (277)
T ss_pred CCEEECCCCCccccCCccee-----ecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH---
Confidence 99999999998765322110 01111245778999999988889999999999999999999 7888865311
Q ss_pred cHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHH
Q 011508 386 TLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLL 464 (484)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 464 (484)
.+.... +....... .+..++..+.+++.+|++.||++|||+.|+++.|+
T Consensus 228 --~~~~~~--------~~~~~~~~--------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 228 --EQVLRF--------VMEGGLLD--------------------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred --HHHHHH--------HHcCCcCC--------------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 111110 00000000 01223567899999999999999999999999886
No 91
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=3.9e-40 Score=299.26 Aligned_cols=281 Identities=22% Similarity=0.287 Sum_probs=203.5
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCCCC-ceeEeeeeeeec-cCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIRHRN-LVKIITSCVSVD-FQG 234 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~n-iv~~~~~~~~~~-~~~ 234 (484)
..|...++||+|+||+||+|+.. .++..||+|++..... +......+|+.+|+.++|+| |+.+++++.... +..
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~--~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~ 88 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSK--RTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRG 88 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEe--cCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccc
Confidence 34566678999999999999944 4568999999986644 34567789999999999999 999999975433 122
Q ss_pred CceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEccc
Q 011508 235 NDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDF 314 (484)
Q Consensus 235 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 314 (484)
....++|+||+ .-+|.+++.........++...+..++.||+.||+||| +++|+||||||+||+++++|.+||+||
T Consensus 89 ~~~l~lvfe~~-d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H---~~~IlHRDLKPQNlLi~~~G~lKlaDF 164 (323)
T KOG0594|consen 89 IGKLYLVFEFL-DRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLH---SHGILHRDLKPQNLLISSSGVLKLADF 164 (323)
T ss_pred cceEEEEEEee-cccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHH---hCCeecccCCcceEEECCCCcEeeecc
Confidence 34778999999 67999999866543345777899999999999999999 999999999999999999999999999
Q ss_pred CcccccccccccCCCCccccccccccccccCccccCCC-CCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHh
Q 011508 315 GLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGS-EVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKE 393 (484)
Q Consensus 315 g~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 393 (484)
|+|+..... ........+|..|+|||++.+. .|+...||||+||++.||++++..|.+..... .+....+-
T Consensus 165 GlAra~~ip-------~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~-ql~~If~~ 236 (323)
T KOG0594|consen 165 GLARAFSIP-------MRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEID-QLFRIFRL 236 (323)
T ss_pred chHHHhcCC-------cccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHH-HHHHHHHH
Confidence 999965322 2223445689999999998886 79999999999999999999999987753311 11111111
Q ss_pred hc-ch--hhhhhc---CcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 394 AL-PE--RLAEIV---DPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 394 ~~-~~--~~~~~~---d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
.- |. .+..+. +-.. .+.... ........ .........+++..|++.+|.+|.|++.++++
T Consensus 237 lGtP~e~~Wp~v~~~~~~k~--~f~~~~-~~~~l~~~------~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 237 LGTPNEKDWPGVSSLPDYKA--PFPKWP-GPKDLSSI------LPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred cCCCCccCCCCccccccccc--cCcCCC-CccchHHh------ccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 10 10 011110 1000 000000 00000000 00001467899999999999999999999986
No 92
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=3.2e-40 Score=324.29 Aligned_cols=259 Identities=21% Similarity=0.273 Sum_probs=195.9
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
++|++.+.||+|+||.||+|+. ..+++.||||++.... ......+.+|++++..++||||+++++++ ..+
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~--~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~-----~~~ 73 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQK--KDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSF-----QDE 73 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEE--CCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEE-----EcC
Confidence 4688999999999999999994 4457889999997532 23345678899999999999999999985 445
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
...++||||+++|+|.+++... ..+++..+..++.|++.||+||| +++|+||||||+|||++.++.+||+|||
T Consensus 74 ~~~~lv~E~~~~g~L~~~l~~~----~~l~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 146 (364)
T cd05599 74 NYLYLIMEYLPGGDMMTLLMKK----DTFTEEETRFYIAETILAIDSIH---KLGYIHRDIKPDNLLLDAKGHIKLSDFG 146 (364)
T ss_pred CeEEEEECCCCCcHHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEeecc
Confidence 5899999999999999999743 34899999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccCCCC-------------------------------ccccccccccccccCccccCCCCCCcccceehhh
Q 011508 316 LAKFLPEAANNLSSN-------------------------------QSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFG 364 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~-------------------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~G 364 (484)
++..+.......... ........||+.|+|||++....++.++||||||
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG 226 (364)
T cd05599 147 LCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLG 226 (364)
T ss_pred cceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecch
Confidence 987653221000000 0001124699999999999988999999999999
Q ss_pred HHHHHHHhCCCCCCCCccCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhc
Q 011508 365 ILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVI 444 (484)
Q Consensus 365 vvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 444 (484)
|++|||++|..||...... ....... .. ...+.. +. ...+..++.+++.+
T Consensus 227 ~il~el~~G~~Pf~~~~~~-----~~~~~i~-----~~-~~~~~~-~~------------------~~~~s~~~~~li~~ 276 (364)
T cd05599 227 VIMYEMLVGYPPFCSDNPQ-----ETYRKII-----NW-KETLQF-PD------------------EVPLSPEAKDLIKR 276 (364)
T ss_pred hHHHHhhcCCCCCCCCCHH-----HHHHHHH-----cC-CCccCC-CC------------------CCCCCHHHHHHHHH
Confidence 9999999999999753211 1111000 00 000000 00 00114467788888
Q ss_pred cCCCCcCCCCC---HHHHHHH
Q 011508 445 CSSELPRERMN---MEEVAAQ 462 (484)
Q Consensus 445 cl~~dP~~RPt---~~evl~~ 462 (484)
|+. +|.+|++ ++|+++.
T Consensus 277 ll~-~p~~R~~~~~~~~ll~h 296 (364)
T cd05599 277 LCC-EAERRLGNNGVNEIKSH 296 (364)
T ss_pred Hcc-CHhhcCCCCCHHHHhcC
Confidence 886 9999998 8888763
No 93
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-40 Score=309.63 Aligned_cols=280 Identities=28% Similarity=0.332 Sum_probs=200.8
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHc--CCCCCceeEeeeeeeeccCCCc
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRS--IRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~~~~~~~~~~~ 236 (484)
.+..+.++||+|.||.||+|.+. ++.||||++... ..+.|.+|-++.+. ++|+||++++++-...+ ....
T Consensus 210 ~pl~l~eli~~Grfg~V~KaqL~----~~~VAVKifp~~---~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t-~~~~ 281 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQLD----NRLVAVKIFPEQ---EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGT-ADRM 281 (534)
T ss_pred CchhhHHHhhcCccceeehhhcc----CceeEEEecCHH---HHHHHHhHHHHHhccCccchhHHHhhchhccCC-cccc
Confidence 44566789999999999999976 488999999754 33677777777664 58999999998743332 2245
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC------CCCeeecCCCCCCeeecCCCceE
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYC------ETPIVHCDLKPSNVLLDGELTAH 310 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~------~~~ivH~dlk~~NIll~~~~~~k 310 (484)
.++||+||.+.|+|.+||+.+. ++|....+|+..+++||+|||+.. +.+|+|||||++||||..|+++.
T Consensus 282 eywLVt~fh~kGsL~dyL~~nt-----isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTcc 356 (534)
T KOG3653|consen 282 EYWLVTEFHPKGSLCDYLKANT-----ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCC 356 (534)
T ss_pred ceeEEeeeccCCcHHHHHHhcc-----ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEE
Confidence 7899999999999999998554 899999999999999999999753 56899999999999999999999
Q ss_pred EcccCcccccccccccCCCCccccccccccccccCccccCCCC------CCcccceehhhHHHHHHHhCCCCCCC-CccC
Q 011508 311 VSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSE------VSTSGDVYSFGILLLEMFTGKGPTNE-MFTG 383 (484)
Q Consensus 311 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~------~~~~~Dvws~Gvvl~elltg~~p~~~-~~~~ 383 (484)
|+|||+|..+.... ........+||.+|||||++.+.. .-.+.||||+|.|||||+++..-+.. ...+
T Consensus 357 IaDFGLAl~~~p~~-----~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~ 431 (534)
T KOG3653|consen 357 IADFGLALRLEPGK-----PQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPE 431 (534)
T ss_pred eeccceeEEecCCC-----CCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCc
Confidence 99999999886432 223334478999999999987642 22478999999999999997644421 1000
Q ss_pred -CccHhHHHHhhcc-hhhhh-hcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHH
Q 011508 384 -NLTLHNFVKEALP-ERLAE-IVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVA 460 (484)
Q Consensus 384 -~~~~~~~~~~~~~-~~~~~-~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl 460 (484)
...+...+..... +.+.+ ++.........+.+. ...-+..+.+.+..||+.||+.|-|+.=|.
T Consensus 432 Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~--------------~h~~~~~l~et~EeCWDhDaeARLTA~Cv~ 497 (534)
T KOG3653|consen 432 YQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWR--------------KHAGMAVLCETIEECWDHDAEARLTAGCVE 497 (534)
T ss_pred ccCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhh--------------cCccHHHHHHHHHHHcCCchhhhhhhHHHH
Confidence 1111111111100 01111 111111110000000 011166789999999999999999999999
Q ss_pred HHHHHHHHHH
Q 011508 461 AQLLSFRNKL 470 (484)
Q Consensus 461 ~~L~~i~~~~ 470 (484)
+++.++..-.
T Consensus 498 eR~~~l~~~~ 507 (534)
T KOG3653|consen 498 ERMAELMMLW 507 (534)
T ss_pred HHHHHHhccC
Confidence 9998875444
No 94
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=1.6e-40 Score=311.23 Aligned_cols=257 Identities=30% Similarity=0.485 Sum_probs=204.7
Q ss_pred hcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCc
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
...+|++.+.||+|+||.||+|.... +..+++|.+..........+.+|+.+++.++|+||+++++++. ...
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~---~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~ 75 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKN---RVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCS-----VGE 75 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecC---CCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEe-----cCC
Confidence 34568889999999999999999653 6789999988665545678899999999999999999999854 344
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCc
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGL 316 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 316 (484)
..++||||+++++|.+++.... ...+++..++.++.|++.||+||| +++++|+||+|+||++++++.+||+|||.
T Consensus 76 ~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~al~~lH---~~~i~h~dl~~~nilv~~~~~~kl~d~g~ 150 (261)
T cd05148 76 PVYIITELMEKGSLLAFLRSPE--GQVLPVASLIDMACQVAEGMAYLE---EQNSIHRDLAARNILVGEDLVCKVADFGL 150 (261)
T ss_pred CeEEEEeecccCCHHHHHhcCC--CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccCcceEEEcCCceEEEccccc
Confidence 7899999999999999997532 345899999999999999999999 89999999999999999999999999999
Q ss_pred ccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhhc
Q 011508 317 AKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEAL 395 (484)
Q Consensus 317 a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 395 (484)
+....... .......++..|+|||......++.++||||||+++|+|++ |+.||...... .......
T Consensus 151 ~~~~~~~~-------~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~--~~~~~~~--- 218 (261)
T cd05148 151 ARLIKEDV-------YLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNH--EVYDQIT--- 218 (261)
T ss_pred hhhcCCcc-------ccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHH--HHHHHHH---
Confidence 97653321 11112346778999999988889999999999999999998 89998653211 0000000
Q ss_pred chhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHH
Q 011508 396 PERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSF 466 (484)
Q Consensus 396 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i 466 (484)
. .... ..+..++..+.+++.+||+.||++|||+.++++.|+.+
T Consensus 219 --------~-~~~~-------------------~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 219 --------A-GYRM-------------------PCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred --------h-CCcC-------------------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 0 0000 00123356789999999999999999999999999753
No 95
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=4.7e-40 Score=313.45 Aligned_cols=266 Identities=24% Similarity=0.388 Sum_probs=204.9
Q ss_pred HhcCCCCccCccccccceeEEEEEEcCC---CCeeEEEEEEeeccCc-cchHHHHHHHHHHHcC-CCCCceeEeeeeeee
Q 011508 156 KATDGFSLENLIGAGSFGSVYKGIFDHD---DHETLVAVKVLNLQHR-GASKSFIAECQALRSI-RHRNLVKIITSCVSV 230 (484)
Q Consensus 156 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~---~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 230 (484)
...++|++.+.||+|+||.||++..... .....+|+|.+..... .....+.+|++++.++ +|+||+++++++.
T Consensus 9 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~-- 86 (293)
T cd05053 9 LPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCT-- 86 (293)
T ss_pred cCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEc--
Confidence 3446788899999999999999986532 2346899999875432 2335688999999999 8999999999853
Q ss_pred ccCCCceeeEEeecccCCCHHHHHhhcC------------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCC
Q 011508 231 DFQGNDFEALVYELMVNGSLEEWLHLNR------------DAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKP 298 (484)
Q Consensus 231 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~------------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~ 298 (484)
.+...+++|||+++|+|.++++... .....+++..++.++.|++.||+||| +++|+||||||
T Consensus 87 ---~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp 160 (293)
T cd05053 87 ---QEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLA---SKKCIHRDLAA 160 (293)
T ss_pred ---CCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---HCCccccccce
Confidence 3447899999999999999997532 23456899999999999999999999 89999999999
Q ss_pred CCeeecCCCceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCC
Q 011508 299 SNVLLDGELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPT 377 (484)
Q Consensus 299 ~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~ 377 (484)
+||+++.++.+||+|||.++.+...... .......++..|+|||.+.+..++.++|||||||++|||++ |..||
T Consensus 161 ~Nil~~~~~~~kL~Dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~ 235 (293)
T cd05053 161 RNVLVTEDHVMKIADFGLARDIHHIDYY-----RKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPY 235 (293)
T ss_pred eeEEEcCCCeEEeCccccccccccccce-----eccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCC
Confidence 9999999999999999999876432210 01111235678999999988889999999999999999998 99998
Q ss_pred CCCccCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHH
Q 011508 378 NEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNME 457 (484)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ 457 (484)
..... .+.... +...... ..+..+...+.+++.+|++.||++|||+.
T Consensus 236 ~~~~~-----~~~~~~---------~~~~~~~-------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~ 282 (293)
T cd05053 236 PGIPV-----EELFKL---------LKEGYRM-------------------EKPQNCTQELYHLMRDCWHEVPSQRPTFK 282 (293)
T ss_pred CCCCH-----HHHHHH---------HHcCCcC-------------------CCCCCCCHHHHHHHHHHcccCcccCcCHH
Confidence 64311 111110 0000000 00122356789999999999999999999
Q ss_pred HHHHHHHHHH
Q 011508 458 EVAAQLLSFR 467 (484)
Q Consensus 458 evl~~L~~i~ 467 (484)
|+++.|+++.
T Consensus 283 eil~~l~~~~ 292 (293)
T cd05053 283 QLVEDLDRML 292 (293)
T ss_pred HHHHHHHHhh
Confidence 9999998874
No 96
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=9.8e-40 Score=312.47 Aligned_cols=263 Identities=25% Similarity=0.401 Sum_probs=201.4
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC-ccchHHHHHHHHHHHcC-CCCCceeEeeeeeeeccCCCc
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH-RGASKSFIAECQALRSI-RHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 236 (484)
++|++.+.||+|+||.||+|.+...+....+|+|.++... ......+.+|++++.++ +|+||+++++++ ..+.
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~-----~~~~ 81 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGAC-----EHRG 81 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEE-----CCCC
Confidence 4678889999999999999997654444567888776432 22345788999999999 899999999985 3445
Q ss_pred eeeEEeecccCCCHHHHHhhcCC------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeec
Q 011508 237 FEALVYELMVNGSLEEWLHLNRD------------APRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLD 304 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~ 304 (484)
..++||||+++++|.++++.... ....+++.+++.++.|++.|++||| +++++||||||+||+++
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~gi~H~dlkp~Nili~ 158 (303)
T cd05088 82 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVG 158 (303)
T ss_pred CceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHH---hCCccccccchheEEec
Confidence 78999999999999999975431 1235889999999999999999999 89999999999999999
Q ss_pred CCCceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccC
Q 011508 305 GELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTG 383 (484)
Q Consensus 305 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~ 383 (484)
.++.+||+|||++....... ......++..|+|||+..+..++.++|||||||++|||+| |..||......
T Consensus 159 ~~~~~kl~dfg~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~ 230 (303)
T cd05088 159 ENYVAKIADFGLSRGQEVYV--------KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA 230 (303)
T ss_pred CCCcEEeCccccCcccchhh--------hcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChH
Confidence 99999999999986431110 0111224667999999888889999999999999999998 99998643211
Q ss_pred CccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHH
Q 011508 384 NLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQL 463 (484)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 463 (484)
+.... .+. ..... .+..++..+.+++.+||+.+|++||++.++++.|
T Consensus 231 -----~~~~~-~~~--------~~~~~-------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l 277 (303)
T cd05088 231 -----ELYEK-LPQ--------GYRLE-------------------KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSL 277 (303)
T ss_pred -----HHHHH-Hhc--------CCcCC-------------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 11110 000 00000 0111245688999999999999999999999999
Q ss_pred HHHHHHH
Q 011508 464 LSFRNKL 470 (484)
Q Consensus 464 ~~i~~~~ 470 (484)
+++...-
T Consensus 278 ~~~~~~~ 284 (303)
T cd05088 278 NRMLEER 284 (303)
T ss_pred HHHHHhh
Confidence 8876543
No 97
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.4e-40 Score=324.31 Aligned_cols=195 Identities=27% Similarity=0.397 Sum_probs=165.0
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
..+|++.+.||+|+||.||++. +..+++.||+|... ...+.+|++++++++||||+++++++. .+..
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~--d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~-----~~~~ 157 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACI--DNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFT-----YNKF 157 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEE--ECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEE-----ECCe
Confidence 3679999999999999999998 44567889999753 235678999999999999999999853 3457
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
.++|+|++ .++|.+++... ..+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||++
T Consensus 158 ~~lv~e~~-~~~L~~~l~~~----~~l~~~~~~~i~~qi~~aL~ylH---~~~IvHrDiKP~NIll~~~~~vkL~DFG~a 229 (391)
T PHA03212 158 TCLILPRY-KTDLYCYLAAK----RNIAICDILAIERSVLRAIQYLH---ENRIIHRDIKAENIFINHPGDVCLGDFGAA 229 (391)
T ss_pred eEEEEecC-CCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHhEEEcCCCCEEEEeCCcc
Confidence 89999999 57898888643 35889999999999999999999 899999999999999999999999999998
Q ss_pred cccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCC
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNE 379 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~ 379 (484)
....... ........||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 230 ~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~ 285 (391)
T PHA03212 230 CFPVDIN------ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFE 285 (391)
T ss_pred ccccccc------ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCC
Confidence 7542211 1112235699999999999998999999999999999999999988753
No 98
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=8.3e-40 Score=306.32 Aligned_cols=255 Identities=33% Similarity=0.485 Sum_probs=200.2
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
.++|++.+.||+|++|.||+|.+. .++.||+|.++... ...+++.+|++++++++|+|++++++++. ....
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~---~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~ 75 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWN---NTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCT-----LEEP 75 (261)
T ss_pred hhheeeEEEecccCCccEEEEEec---CCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEe-----cCCC
Confidence 456889999999999999999854 34679999987543 23567899999999999999999999853 3447
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
.++||||+++++|.+++.... ...+++..+..++.|++.|+.||| +++++||||||+||++++++.+||+|||++
T Consensus 76 ~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~ 150 (261)
T cd05068 76 IYIVTELMKYGSLLEYLQGGA--GRALKLPQLIDMAAQVASGMAYLE---AQNYIHRDLAARNVLVGENNICKVADFGLA 150 (261)
T ss_pred eeeeeecccCCcHHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCcceEEEcCCCCEEECCcceE
Confidence 899999999999999997433 345899999999999999999999 899999999999999999999999999999
Q ss_pred cccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhhcc
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEALP 396 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 396 (484)
....... .........+..|+|||+..+..++.++||||||+++|||++ |+.||...... .....+
T Consensus 151 ~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~~----- 217 (261)
T cd05068 151 RVIKEDI------YEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNA--EVLQQV----- 217 (261)
T ss_pred EEccCCc------ccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHH--HHHHHH-----
Confidence 8764221 011111223468999999988899999999999999999999 99998653211 000000
Q ss_pred hhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHH
Q 011508 397 ERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLS 465 (484)
Q Consensus 397 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 465 (484)
+...... .+..++..+.+++.+|++.+|++||++.++++.|++
T Consensus 218 -------~~~~~~~-------------------~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 218 -------DQGYRMP-------------------CPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred -------HcCCCCC-------------------CCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 0000000 011225678999999999999999999999999986
No 99
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=1.5e-39 Score=303.78 Aligned_cols=252 Identities=25% Similarity=0.396 Sum_probs=195.9
Q ss_pred ccccccceeEEEEEEcCCCCeeEEEEEEeeccCcc-chHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCceeeEEeec
Q 011508 166 LIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRG-ASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFEALVYEL 244 (484)
Q Consensus 166 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~ 244 (484)
.||+|+||.||+|.+.....+..||+|++...... ..+.+.+|+.++++++|+||+++++++. ....++||||
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~------~~~~~lv~e~ 75 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE------AEALMLVMEM 75 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc------CCCeEEEEEe
Confidence 38999999999998765555677999998755332 2356889999999999999999999752 2357899999
Q ss_pred ccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccccccccc
Q 011508 245 MVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFLPEAA 324 (484)
Q Consensus 245 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~~~~~ 324 (484)
+++++|.+++... ...+++..++.++.|++.||+||| +++++||||||+||+++.++.+||+|||++.......
T Consensus 76 ~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~ 149 (257)
T cd05115 76 ASGGPLNKFLSGK---KDEITVSNVVELMHQVSMGMKYLE---GKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADD 149 (257)
T ss_pred CCCCCHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHH---hcCeeecccchheEEEcCCCcEEeccCCccccccCCc
Confidence 9999999998743 235899999999999999999999 8999999999999999999999999999997653322
Q ss_pred ccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhhcchhhhhhc
Q 011508 325 NNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEALPERLAEIV 403 (484)
Q Consensus 325 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (484)
... .......++..|+|||.+....++.++|||||||++||+++ |+.||...... .....+..
T Consensus 150 ~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~---------- 213 (257)
T cd05115 150 SYY----KARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP--EVMSFIEQ---------- 213 (257)
T ss_pred cce----eccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH--HHHHHHHC----------
Confidence 110 11111234578999999888889999999999999999996 99999754211 11111100
Q ss_pred CcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHH
Q 011508 404 DPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSF 466 (484)
Q Consensus 404 d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i 466 (484)
.... ..+..++.++.+++.+||..+|++||++.+|.+.|+.+
T Consensus 214 --~~~~-------------------~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 214 --GKRL-------------------DCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred --CCCC-------------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 0000 00223366789999999999999999999999998764
No 100
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=9.9e-40 Score=310.69 Aligned_cols=263 Identities=26% Similarity=0.394 Sum_probs=201.8
Q ss_pred CCCccCccccccceeEEEEEEcCC---CCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHD---DHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~---~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
+|++.+.||+|+||.||+|+.... .....+++|.+..... .....+.+|+.+++.++||||+++++.|. .+
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~ 75 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACS-----QD 75 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEe-----cC
Confidence 477889999999999999986422 2335788998865432 23457889999999999999999999854 34
Q ss_pred ceeeEEeecccCCCHHHHHhhcCC--------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRD--------------------APRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCD 295 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~--------------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~d 295 (484)
+..++|+||+.+++|.+++..... ....+++..++.++.|++.||+||| +.+++|||
T Consensus 76 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH---~~~ivH~d 152 (290)
T cd05045 76 GPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLA---EMKLVHRD 152 (290)
T ss_pred CCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHH---HCCeehhh
Confidence 478999999999999999864321 1235889999999999999999999 89999999
Q ss_pred CCCCCeeecCCCceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CC
Q 011508 296 LKPSNVLLDGELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GK 374 (484)
Q Consensus 296 lk~~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~ 374 (484)
|||+||++++++.+||+|||+++........ .......++..|+|||...+..++.++||||||+++|||++ |.
T Consensus 153 ikp~nill~~~~~~kl~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~ 227 (290)
T cd05045 153 LAARNVLVAEGRKMKISDFGLSRDVYEEDSY-----VKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGG 227 (290)
T ss_pred hhhheEEEcCCCcEEeccccccccccCccch-----hcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999998765332211 01112345678999999888889999999999999999998 99
Q ss_pred CCCCCCccCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCC
Q 011508 375 GPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERM 454 (484)
Q Consensus 375 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP 454 (484)
.||...... .+.+.+........ +..+...+.+++..|++.+|++||
T Consensus 228 ~p~~~~~~~--------------~~~~~~~~~~~~~~-------------------~~~~~~~~~~~i~~cl~~~P~~Rp 274 (290)
T cd05045 228 NPYPGIAPE--------------RLFNLLKTGYRMER-------------------PENCSEEMYNLMLTCWKQEPDKRP 274 (290)
T ss_pred CCCCCCCHH--------------HHHHHHhCCCCCCC-------------------CCCCCHHHHHHHHHHccCCcccCC
Confidence 998653111 11111111110000 122356788999999999999999
Q ss_pred CHHHHHHHHHHHHH
Q 011508 455 NMEEVAAQLLSFRN 468 (484)
Q Consensus 455 t~~evl~~L~~i~~ 468 (484)
++.|+++.|+++-.
T Consensus 275 ~~~~i~~~l~~~~~ 288 (290)
T cd05045 275 TFADISKELEKMMV 288 (290)
T ss_pred CHHHHHHHHHHHHh
Confidence 99999999998753
No 101
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=7.8e-40 Score=309.61 Aligned_cols=249 Identities=25% Similarity=0.328 Sum_probs=192.4
Q ss_pred cccccceeEEEEEEcCCCCeeEEEEEEeeccCc---cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCceeeEEee
Q 011508 167 IGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR---GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFEALVYE 243 (484)
Q Consensus 167 lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 243 (484)
||+|+||+||++.. ..+++.||+|.+..... ...+.+..|+++++.++|+||+++.+++ ..+...++|||
T Consensus 1 lg~G~~g~Vy~~~~--~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~-----~~~~~~~lv~e 73 (280)
T cd05608 1 LGKGGFGEVSACQM--RATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAF-----QTKTDLCLVMT 73 (280)
T ss_pred CCCCCceeEEEEEE--ccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEE-----cCCCeEEEEEe
Confidence 79999999999984 34578899999874322 2235677899999999999999998874 44557899999
Q ss_pred cccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcccccccc
Q 011508 244 LMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFLPEA 323 (484)
Q Consensus 244 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~~~~ 323 (484)
|+++|+|.+++.........+++..++.++.|++.||+||| +++|+||||||+||+++.++.++|+|||.+..+...
T Consensus 74 ~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~ 150 (280)
T cd05608 74 IMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLH---QRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDG 150 (280)
T ss_pred CCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCccceecCCC
Confidence 99999999888654444456899999999999999999999 899999999999999999999999999998765332
Q ss_pred cccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchhhhhhc
Q 011508 324 ANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPERLAEIV 403 (484)
Q Consensus 324 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (484)
. .......|+..|+|||.+.+..++.++|||||||++|||++|+.||....... ....... .+.
T Consensus 151 ~-------~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~-~~~~~~~--------~~~ 214 (280)
T cd05608 151 Q-------SKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV-ENKELKQ--------RIL 214 (280)
T ss_pred C-------ccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcch-hHHHHHH--------hhc
Confidence 1 11223468999999999999999999999999999999999999997532111 0001110 011
Q ss_pred CcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCC-----CHHHHHHH
Q 011508 404 DPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERM-----NMEEVAAQ 462 (484)
Q Consensus 404 d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~ 462 (484)
...... +..++..+.+++.+||+.||++|| +++++++.
T Consensus 215 ~~~~~~---------------------~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h 257 (280)
T cd05608 215 NDSVTY---------------------PDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTH 257 (280)
T ss_pred ccCCCC---------------------cccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence 100000 112356788999999999999999 67777753
No 102
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=1.3e-39 Score=308.23 Aligned_cols=268 Identities=25% Similarity=0.428 Sum_probs=208.1
Q ss_pred hcCCCCccCccccccceeEEEEEEcCCC--CeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccC
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHDD--HETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQ 233 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~--~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 233 (484)
..++|.+.+.||+|+||.||+|...... .+..|++|++..... .....+.+|+.++++++|+|++++++++. .
T Consensus 4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~----~ 79 (280)
T cd05043 4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCI----E 79 (280)
T ss_pred chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe----c
Confidence 3467889999999999999999975422 367899998864432 23466889999999999999999999874 3
Q ss_pred CCceeeEEeecccCCCHHHHHhhcCCC----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCce
Q 011508 234 GNDFEALVYELMVNGSLEEWLHLNRDA----PRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTA 309 (484)
Q Consensus 234 ~~~~~~lv~e~~~~gsL~~~l~~~~~~----~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~ 309 (484)
.+...++++||+++++|.+++...... ...+++..++.++.|++.||+||| +++++||||||+||++++++.+
T Consensus 80 ~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH---~~~i~H~di~p~nil~~~~~~~ 156 (280)
T cd05043 80 DGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLH---KRGVIHKDIAARNCVIDEELQV 156 (280)
T ss_pred CCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCHhhEEEcCCCcE
Confidence 345778999999999999999754322 146899999999999999999999 8999999999999999999999
Q ss_pred EEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHh
Q 011508 310 HVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLH 388 (484)
Q Consensus 310 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~ 388 (484)
||+|||+++.+....... ......++..|+|||++.+..++.++|||||||++||+++ |+.||..... ..+.
T Consensus 157 kl~d~g~~~~~~~~~~~~-----~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~~~~ 229 (280)
T cd05043 157 KITDNALSRDLFPMDYHC-----LGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP--FEMA 229 (280)
T ss_pred EECCCCCcccccCCceEE-----eCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH--HHHH
Confidence 999999998653322110 1112245778999999988889999999999999999999 9999865311 1111
Q ss_pred HHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHH
Q 011508 389 NFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRN 468 (484)
Q Consensus 389 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~ 468 (484)
.+..... . +.. ...++.++.+++.+||+.||++|||+.||++.|+++..
T Consensus 230 ~~~~~~~--------~--~~~---------------------~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 230 AYLKDGY--------R--LAQ---------------------PINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred HHHHcCC--------C--CCC---------------------CCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 1111100 0 000 11235678999999999999999999999999999865
Q ss_pred H
Q 011508 469 K 469 (484)
Q Consensus 469 ~ 469 (484)
+
T Consensus 279 ~ 279 (280)
T cd05043 279 Q 279 (280)
T ss_pred c
Confidence 4
No 103
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=4.4e-40 Score=321.77 Aligned_cols=257 Identities=25% Similarity=0.331 Sum_probs=200.1
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
++|.+.+.||+|+||.||+|+.. .+++.||+|+++... ......+.+|++++..++|+||+++++++ .++
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~ 73 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDK--DTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSF-----QDE 73 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEEC--CCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhhe-----ecC
Confidence 46889999999999999999843 457889999997542 23446788999999999999999999884 445
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
+..++||||+++++|.+++... ..+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||
T Consensus 74 ~~~~lv~e~~~~~~L~~~l~~~----~~l~~~~~~~i~~qi~~aL~~LH---~~giiH~Dlkp~NIll~~~~~~kL~Dfg 146 (350)
T cd05573 74 EHLYLVMEYMPGGDLMNLLIRK----DVFPEETARFYIAELVLALDSVH---KLGFIHRDIKPDNILIDADGHIKLADFG 146 (350)
T ss_pred CeEEEEEcCCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEeecCC
Confidence 6899999999999999999744 35889999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccC----------------------CCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhC
Q 011508 316 LAKFLPEAANNL----------------------SSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTG 373 (484)
Q Consensus 316 ~a~~~~~~~~~~----------------------~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg 373 (484)
++.......... ...........||+.|+|||++.+..++.++|||||||++|||++|
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g 226 (350)
T cd05573 147 LCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYG 226 (350)
T ss_pred CCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccC
Confidence 998664332000 0000112235689999999999999999999999999999999999
Q ss_pred CCCCCCCccCCccHhHHHHhhcchhhhhhcC--cccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcC
Q 011508 374 KGPTNEMFTGNLTLHNFVKEALPERLAEIVD--PVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPR 451 (484)
Q Consensus 374 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~ 451 (484)
+.||...... .... .+.. ..+.. +. ...++..+.+++..|+. ||.
T Consensus 227 ~~Pf~~~~~~-----~~~~--------~i~~~~~~~~~--------------p~-----~~~~~~~~~~li~~ll~-dp~ 273 (350)
T cd05573 227 FPPFYSDTLQ-----ETYN--------KIINWKESLRF--------------PP-----DPPVSPEAIDLICRLLC-DPE 273 (350)
T ss_pred CCCCCCCCHH-----HHHH--------HHhccCCcccC--------------CC-----CCCCCHHHHHHHHHHcc-Chh
Confidence 9999753211 0000 1111 00000 00 00125678899999997 999
Q ss_pred CCCC-HHHHHHH
Q 011508 452 ERMN-MEEVAAQ 462 (484)
Q Consensus 452 ~RPt-~~evl~~ 462 (484)
+||+ ++|+++.
T Consensus 274 ~R~~s~~~ll~h 285 (350)
T cd05573 274 DRLGSFEEIKSH 285 (350)
T ss_pred hcCCCHHHHhcC
Confidence 9999 9999875
No 104
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=8.4e-40 Score=315.66 Aligned_cols=244 Identities=25% Similarity=0.311 Sum_probs=190.9
Q ss_pred CccccccceeEEEEEEcC-CCCeeEEEEEEeeccC----ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCceee
Q 011508 165 NLIGAGSFGSVYKGIFDH-DDHETLVAVKVLNLQH----RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFEA 239 (484)
Q Consensus 165 ~~lg~G~~g~Vy~~~~~~-~~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 239 (484)
+.||+|+||.||+++... ...++.||+|+++... ......+.+|+.+++.++||||+++++++ ..++..+
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~-----~~~~~~~ 76 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAF-----QTGGKLY 76 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEE-----ecCCeEE
Confidence 679999999999998542 2457889999987532 22335677899999999999999999885 3445889
Q ss_pred EEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcccc
Q 011508 240 LVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKF 319 (484)
Q Consensus 240 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~ 319 (484)
+||||+++++|.+++... ..+.+..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++.
T Consensus 77 lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~ 149 (323)
T cd05584 77 LILEYLSGGELFMHLERE----GIFMEDTACFYLSEISLALEHLH---QQGIIYRDLKPENILLDAQGHVKLTDFGLCKE 149 (323)
T ss_pred EEEeCCCCchHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEeeCcCCee
Confidence 999999999999998743 34778888999999999999999 89999999999999999999999999999874
Q ss_pred cccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchhh
Q 011508 320 LPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPERL 399 (484)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 399 (484)
..... .......|++.|+|||++.+..++.++|||||||++|||++|+.||..... .....
T Consensus 150 ~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~-----~~~~~------- 210 (323)
T cd05584 150 SIHEG-------TVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENR-----KKTID------- 210 (323)
T ss_pred cccCC-------CcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCH-----HHHHH-------
Confidence 32111 112234689999999999988899999999999999999999999965311 11111
Q ss_pred hhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCC-----CHHHHHH
Q 011508 400 AEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERM-----NMEEVAA 461 (484)
Q Consensus 400 ~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~ 461 (484)
.+....... +..+...+.+++.+||+.||++|| +++++++
T Consensus 211 -~~~~~~~~~---------------------~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 211 -KILKGKLNL---------------------PPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred -HHHcCCCCC---------------------CCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 111111100 112245688999999999999999 7888776
No 105
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=2.8e-40 Score=319.37 Aligned_cols=243 Identities=23% Similarity=0.289 Sum_probs=190.6
Q ss_pred CccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCceeeEE
Q 011508 165 NLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFEALV 241 (484)
Q Consensus 165 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 241 (484)
+.||+|+||.||++.. ..++..||+|+++... ......+.+|++++..++||||+++++++ ..++..++|
T Consensus 1 ~~lG~G~~g~V~~~~~--~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~-----~~~~~~~lv 73 (325)
T cd05594 1 KLLGKGTFGKVILVKE--KATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSF-----QTHDRLCFV 73 (325)
T ss_pred CeeeeCCCEEEEEEEE--CCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEE-----EcCCEEEEE
Confidence 4699999999999984 4467899999997542 22345677899999999999999999874 445588999
Q ss_pred eecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC-CCeeecCCCCCCeeecCCCceEEcccCccccc
Q 011508 242 YELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCE-TPIVHCDLKPSNVLLDGELTAHVSDFGLAKFL 320 (484)
Q Consensus 242 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~ 320 (484)
|||+++|+|.+++... ..+++..+..++.||+.||+||| + .+|+||||||+||+++.++.+||+|||+++..
T Consensus 74 ~E~~~~~~L~~~l~~~----~~l~~~~~~~~~~qi~~aL~~lH---~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~ 146 (325)
T cd05594 74 MEYANGGELFFHLSRE----RVFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEG 146 (325)
T ss_pred EeCCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---hcCCEEecCCCCCeEEECCCCCEEEecCCCCeec
Confidence 9999999999988643 35899999999999999999999 6 79999999999999999999999999998753
Q ss_pred ccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchhhh
Q 011508 321 PEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPERLA 400 (484)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 400 (484)
.... .......||..|+|||++.+..++.++|||||||++|||++|+.||..... ......
T Consensus 147 ~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~-----~~~~~~------- 207 (325)
T cd05594 147 IKDG-------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-----EKLFEL------- 207 (325)
T ss_pred CCCC-------cccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCH-----HHHHHH-------
Confidence 2211 111234689999999999988999999999999999999999999965311 111110
Q ss_pred hhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCC-----CHHHHHHH
Q 011508 401 EIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERM-----NMEEVAAQ 462 (484)
Q Consensus 401 ~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~ 462 (484)
+....... +.....++.+++.+||+.||++|+ ++.++++.
T Consensus 208 -i~~~~~~~---------------------p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 208 -ILMEEIRF---------------------PRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred -HhcCCCCC---------------------CCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 00000000 111255688999999999999996 89998854
No 106
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=9.7e-40 Score=321.83 Aligned_cols=264 Identities=25% Similarity=0.356 Sum_probs=202.3
Q ss_pred cCCCCccCccccccceeEEEEEEcC---CCCeeEEEEEEeeccCcc-chHHHHHHHHHHHcCC-CCCceeEeeeeeeecc
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDH---DDHETLVAVKVLNLQHRG-ASKSFIAECQALRSIR-HRNLVKIITSCVSVDF 232 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~---~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~ 232 (484)
.++|.+.+.||+|+||.||+|++.. ...+..||+|+++..... ..+.+.+|++++.++. ||||++++++|..
T Consensus 36 ~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~--- 112 (401)
T cd05107 36 RDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTK--- 112 (401)
T ss_pred HHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEcc---
Confidence 3457788999999999999998642 234568999999754332 2346889999999997 9999999998643
Q ss_pred CCCceeeEEeecccCCCHHHHHhhcCC-----------------------------------------------------
Q 011508 233 QGNDFEALVYELMVNGSLEEWLHLNRD----------------------------------------------------- 259 (484)
Q Consensus 233 ~~~~~~~lv~e~~~~gsL~~~l~~~~~----------------------------------------------------- 259 (484)
+...++||||+++|+|.++++....
T Consensus 113 --~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (401)
T cd05107 113 --GGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYV 190 (401)
T ss_pred --CCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCcc
Confidence 3478999999999999999975321
Q ss_pred -----------------------------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCC
Q 011508 260 -----------------------------------------APRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKP 298 (484)
Q Consensus 260 -----------------------------------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~ 298 (484)
....+++..++.++.|++.||+||| +++++||||||
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrdlkp 267 (401)
T cd05107 191 PMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLA---SKNCVHRDLAA 267 (401)
T ss_pred chhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHh---cCCcCcccCCc
Confidence 1124678889999999999999999 89999999999
Q ss_pred CCeeecCCCceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCC
Q 011508 299 SNVLLDGELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPT 377 (484)
Q Consensus 299 ~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~ 377 (484)
+||++++++.+||+|||+++........ .......++..|+|||.+.+..++.++|||||||++|||++ |..||
T Consensus 268 ~NiLl~~~~~~kL~DfGla~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~ 342 (401)
T cd05107 268 RNVLICEGKLVKICDFGLARDIMRDSNY-----ISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPY 342 (401)
T ss_pred ceEEEeCCCEEEEEecCcceeccccccc-----ccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCC
Confidence 9999999999999999999865322111 11112346788999999988889999999999999999998 88898
Q ss_pred CCCccCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHH
Q 011508 378 NEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNME 457 (484)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ 457 (484)
........ .. ..+...... ..+..+..++.+++..||+.+|.+||+++
T Consensus 343 ~~~~~~~~-~~------------~~~~~~~~~-------------------~~p~~~~~~l~~li~~cl~~~P~~RPs~~ 390 (401)
T cd05107 343 PELPMNEQ-FY------------NAIKRGYRM-------------------AKPAHASDEIYEIMQKCWEEKFEIRPDFS 390 (401)
T ss_pred CCCCchHH-HH------------HHHHcCCCC-------------------CCCCCCCHHHHHHHHHHcCCChhHCcCHH
Confidence 65321110 00 000000000 00122356789999999999999999999
Q ss_pred HHHHHHHHH
Q 011508 458 EVAAQLLSF 466 (484)
Q Consensus 458 evl~~L~~i 466 (484)
||++.|+++
T Consensus 391 ell~~L~~~ 399 (401)
T cd05107 391 QLVHLVGDL 399 (401)
T ss_pred HHHHHHHHH
Confidence 999999876
No 107
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=5.3e-40 Score=322.39 Aligned_cols=255 Identities=21% Similarity=0.268 Sum_probs=196.2
Q ss_pred hcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccC
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQ 233 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 233 (484)
..++|++.+.||+|+||.||+|+. ..++..||+|+++... ......+.+|+.+++.++||||+++++++ .
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~-----~ 113 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRH--KSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAF-----Q 113 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEE--CCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEE-----e
Confidence 456799999999999999999984 4467889999986432 22334577899999999999999999874 4
Q ss_pred CCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcc
Q 011508 234 GNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSD 313 (484)
Q Consensus 234 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~D 313 (484)
++...++||||+++|+|.+++... .+++..+..++.|++.||+||| +++|+||||||+|||++.++.+||+|
T Consensus 114 ~~~~~~lv~Ey~~gg~L~~~l~~~-----~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~kL~D 185 (370)
T cd05596 114 DDKYLYMVMEYMPGGDLVNLMSNY-----DIPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLAD 185 (370)
T ss_pred cCCEEEEEEcCCCCCcHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEcCCCCEEEEe
Confidence 455899999999999999998632 3788888999999999999999 89999999999999999999999999
Q ss_pred cCcccccccccccCCCCccccccccccccccCccccCCC----CCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhH
Q 011508 314 FGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGS----EVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHN 389 (484)
Q Consensus 314 fg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~----~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~ 389 (484)
||++....... ........||+.|+|||++.+. .++.++|||||||++|||++|+.||..... ..
T Consensus 186 fG~~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~-----~~ 254 (370)
T cd05596 186 FGTCMKMDANG------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL-----VG 254 (370)
T ss_pred ccceeeccCCC------cccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCH-----HH
Confidence 99987653221 1111234689999999987653 478999999999999999999999975321 11
Q ss_pred HHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCC--CCCHHHHHHH
Q 011508 390 FVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRE--RMNMEEVAAQ 462 (484)
Q Consensus 390 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPt~~evl~~ 462 (484)
.. ..+.+..-...... ....+.++.+++..|++.+|++ |||++|+++.
T Consensus 255 ~~--------~~i~~~~~~~~~~~-----------------~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 255 TY--------SKIMDHKNSLTFPD-----------------DIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred HH--------HHHHcCCCcCCCCC-----------------cCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 11 11111000000000 0112557889999999999988 9999999764
No 108
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=7e-40 Score=327.92 Aligned_cols=281 Identities=23% Similarity=0.281 Sum_probs=197.2
Q ss_pred hcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccC---
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQ--- 233 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~--- 233 (484)
...+|.+.+.||+|+||.||+|+.. .+++.||||++.... ....+|+.+++.++||||+++++++....+.
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~--~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~ 137 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICI--DTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNE 137 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEEC--CCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCC
Confidence 3467999999999999999999854 356789999885432 2345799999999999999999876543222
Q ss_pred CCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCC-ceEEc
Q 011508 234 GNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGEL-TAHVS 312 (484)
Q Consensus 234 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~-~~kl~ 312 (484)
...+.++||||++ ++|.+++.........+++..++.++.||+.||+||| +++|+||||||+|||++.++ .+||+
T Consensus 138 ~~~~l~lvmE~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH---~~~IiHrDLKp~NILl~~~~~~vkL~ 213 (440)
T PTZ00036 138 KNIFLNVVMEFIP-QTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIH---SKFICHRDLKPQNLLIDPNTHTLKLC 213 (440)
T ss_pred CceEEEEEEecCC-ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCcCHHHEEEcCCCCceeee
Confidence 2235679999996 5788877654444567999999999999999999999 89999999999999998665 79999
Q ss_pred ccCcccccccccccCCCCccccccccccccccCccccCC-CCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHH
Q 011508 313 DFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFV 391 (484)
Q Consensus 313 Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 391 (484)
|||+++.+.... ......||+.|+|||++.+ ..++.++|||||||++|||++|++||.+.... ..+....
T Consensus 214 DFGla~~~~~~~--------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~-~~~~~i~ 284 (440)
T PTZ00036 214 DFGSAKNLLAGQ--------RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSV-DQLVRII 284 (440)
T ss_pred ccccchhccCCC--------CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHH
Confidence 999998653221 1123468999999998765 46899999999999999999999999753221 1111111
Q ss_pred Hhhcch--hhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 392 KEALPE--RLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 392 ~~~~~~--~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
...... .......+.... ....... ........+...+.++.+|+.+||+.||.+|||+.|+++.
T Consensus 285 ~~~~~p~~~~~~~~~~~~~~----~~~~~~~--~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h 351 (440)
T PTZ00036 285 QVLGTPTEDQLKEMNPNYAD----IKFPDVK--PKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD 351 (440)
T ss_pred HHhCCCCHHHHHHhchhhhc----ccCCccC--chhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence 111000 000001110000 0000000 0000000012235678999999999999999999999854
No 109
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=1e-39 Score=315.59 Aligned_cols=243 Identities=23% Similarity=0.316 Sum_probs=186.4
Q ss_pred CccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcC-CCCCceeEeeeeeeeccCCCceeeE
Q 011508 165 NLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSI-RHRNLVKIITSCVSVDFQGNDFEAL 240 (484)
Q Consensus 165 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~l 240 (484)
+.||+|+||.||+|+.. .+++.||+|+++... ......+.+|+.++.++ +||||+++++++. .+...++
T Consensus 1 ~~lG~G~~g~V~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~-----~~~~~~l 73 (329)
T cd05618 1 RVIGRGSYAKVLLVRLK--KTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQ-----TESRLFF 73 (329)
T ss_pred CeeeeCCCeEEEEEEEC--CCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEE-----eCCEEEE
Confidence 46999999999999844 457889999997542 22335577888888877 8999999999853 3458899
Q ss_pred EeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccccc
Q 011508 241 VYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFL 320 (484)
Q Consensus 241 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~ 320 (484)
||||+++|+|..++... ..+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++..
T Consensus 74 v~E~~~~~~L~~~~~~~----~~l~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~ 146 (329)
T cd05618 74 VIEYVNGGDLMFHMQRQ----RKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 146 (329)
T ss_pred EEeCCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEECCCCCEEEeeCCccccc
Confidence 99999999999888643 35899999999999999999999 899999999999999999999999999998753
Q ss_pred ccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCC---ccHhHHHHhhcch
Q 011508 321 PEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGN---LTLHNFVKEALPE 397 (484)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~---~~~~~~~~~~~~~ 397 (484)
.... .......||..|+|||++.+..++.++|||||||++|||++|+.||....... .....+....
T Consensus 147 ~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~--- 216 (329)
T cd05618 147 LRPG-------DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQV--- 216 (329)
T ss_pred cCCC-------CccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHH---
Confidence 2111 11223568999999999999999999999999999999999999996432111 1111111110
Q ss_pred hhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCH
Q 011508 398 RLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNM 456 (484)
Q Consensus 398 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~ 456 (484)
+...... .+..+...+.+++.+||+.||++||++
T Consensus 217 ----i~~~~~~---------------------~p~~~~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 217 ----ILEKQIR---------------------IPRSLSVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred ----HhcCCCC---------------------CCCCCCHHHHHHHHHHhcCCHHHcCCC
Confidence 0000000 012225568899999999999999984
No 110
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=7.4e-40 Score=310.45 Aligned_cols=261 Identities=25% Similarity=0.408 Sum_probs=200.0
Q ss_pred CCCCccCccccccceeEEEEEEc--CCCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFD--HDDHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~--~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
.+|++.+.||+|+||.||+|.+. +...+..+++|.+..... .....+.+|++++++++||||+++++++. ..
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-----~~ 79 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVT-----QE 79 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEe-----cC
Confidence 45788899999999999999853 223567899999874332 23357889999999999999999999853 34
Q ss_pred ceeeEEeecccCCCHHHHHhhcCC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCee
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRD-------------APRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVL 302 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIl 302 (484)
...++||||+++++|.+++..... ....+++.+++.++.|++.||+||| +++++||||||+||+
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~nil 156 (283)
T cd05090 80 QPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLS---SHFFVHKDLAARNIL 156 (283)
T ss_pred CceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hcCeehhccccceEE
Confidence 478999999999999999863321 1234789999999999999999999 899999999999999
Q ss_pred ecCCCceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCc
Q 011508 303 LDGELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMF 381 (484)
Q Consensus 303 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~ 381 (484)
+++++.+||+|||+++....... ........++..|+|||++.+..++.++|||||||++|||++ |..||....
T Consensus 157 i~~~~~~kl~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~ 231 (283)
T cd05090 157 IGEQLHVKISDLGLSREIYSADY-----YRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFS 231 (283)
T ss_pred EcCCCcEEeccccccccccCCcc-----eecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCC
Confidence 99999999999999976532211 111122335678999999988889999999999999999998 998986531
Q ss_pred cCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 382 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
. ....+.+.... .+ . .+..++..+.+++..|++.||++||++.+|.+
T Consensus 232 ~--~~~~~~~~~~~----------~~-~--------------------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~ 278 (283)
T cd05090 232 N--QEVIEMVRKRQ----------LL-P--------------------CSEDCPPRMYSLMTECWQEGPSRRPRFKDIHT 278 (283)
T ss_pred H--HHHHHHHHcCC----------cC-C--------------------CCCCCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 1 11111111000 00 0 01223567889999999999999999999999
Q ss_pred HHHH
Q 011508 462 QLLS 465 (484)
Q Consensus 462 ~L~~ 465 (484)
+|..
T Consensus 279 ~l~~ 282 (283)
T cd05090 279 RLRS 282 (283)
T ss_pred Hhhc
Confidence 8864
No 111
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-40 Score=315.55 Aligned_cols=264 Identities=24% Similarity=0.350 Sum_probs=208.7
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccch-HHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGAS-KSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~-~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
....+.++||+|-||.|..+... ....||||.++....... .+|.+|+++|.+|+||||++++|.|...+ .
T Consensus 538 s~L~~~ekiGeGqFGEVhLCeve---g~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~De-----P 609 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFGEVHLCEVE---GPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDD-----P 609 (807)
T ss_pred hheehhhhhcCcccceeEEEEec---CceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCC-----c
Confidence 44677899999999999999866 468999999987665444 78999999999999999999999996544 7
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
+++|+|||++|+|.+|+..+... .+.-....+|+.||+.|++||. +.++|||||.++|+|+++++++||+|||++
T Consensus 610 icmI~EYmEnGDLnqFl~aheap--t~~t~~~vsi~tqiasgmaYLe---s~nfVHrd~a~rNcLv~~e~~iKiadfgms 684 (807)
T KOG1094|consen 610 LCMITEYMENGDLNQFLSAHELP--TAETAPGVSICTQIASGMAYLE---SLNFVHRDLATRNCLVDGEFTIKIADFGMS 684 (807)
T ss_pred hHHHHHHHhcCcHHHHHHhccCc--ccccchhHHHHHHHHHHHHHHH---hhchhhccccccceeecCcccEEecCcccc
Confidence 89999999999999999866432 2455667789999999999999 899999999999999999999999999999
Q ss_pred cccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh--CCCCCCCCccCCccHhHHHHhhc
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT--GKGPTNEMFTGNLTLHNFVKEAL 395 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt--g~~p~~~~~~~~~~~~~~~~~~~ 395 (484)
+-+-.... .......+-+.+|||||.+.-++++.++|||+||+++||+++ ...||.+..++. .
T Consensus 685 R~lysg~y-----y~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~----------v 749 (807)
T KOG1094|consen 685 RNLYSGDY-----YRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQ----------V 749 (807)
T ss_pred cccccCCc-----eeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHH----------H
Confidence 86533221 111223456789999999999999999999999999999865 788987643321 1
Q ss_pred chhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHH
Q 011508 396 PERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSF 466 (484)
Q Consensus 396 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i 466 (484)
-+....+.+..-... --..+.-|+.++.+++.+||..|-++||+++++...|++.
T Consensus 750 ven~~~~~~~~~~~~----------------~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 750 VENAGEFFRDQGRQV----------------VLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred HHhhhhhcCCCCcce----------------eccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 111222221110000 0011556789999999999999999999999999888764
No 112
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=5.8e-40 Score=317.03 Aligned_cols=245 Identities=27% Similarity=0.339 Sum_probs=189.0
Q ss_pred CCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHH---HcCCCCCceeEeeeeeeeccCC
Q 011508 161 FSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQAL---RSIRHRNLVKIITSCVSVDFQG 234 (484)
Q Consensus 161 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l---~~l~h~niv~~~~~~~~~~~~~ 234 (484)
|++.+.||+|+||.||+|... .+++.||||+++... ....+.+.+|++++ +.++||||+++++++ ..
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~-----~~ 73 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYK--KTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACF-----QT 73 (324)
T ss_pred CeEEEEEeecCCEEEEEEEEC--CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEE-----Ec
Confidence 667889999999999999854 457889999997542 22234566666554 567899999999985 34
Q ss_pred CceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEccc
Q 011508 235 NDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDF 314 (484)
Q Consensus 235 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 314 (484)
....++||||+++++|..+++. ..+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+||
T Consensus 74 ~~~~~lv~E~~~~~~L~~~~~~-----~~l~~~~~~~~~~qi~~al~~lH---~~~ivHrdlkp~Nill~~~~~~kL~Df 145 (324)
T cd05589 74 EDHVCFVMEYAAGGDLMMHIHT-----DVFSEPRAVFYAACVVLGLQYLH---ENKIVYRDLKLDNLLLDTEGFVKIADF 145 (324)
T ss_pred CCEEEEEEcCCCCCcHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeEecCCCHHHeEECCCCcEEeCcc
Confidence 5588999999999999988862 35899999999999999999999 899999999999999999999999999
Q ss_pred CcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhh
Q 011508 315 GLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEA 394 (484)
Q Consensus 315 g~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 394 (484)
|+++..... ........|++.|+|||.+.+..++.++|||||||++|||++|+.||...... .....
T Consensus 146 g~~~~~~~~-------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~-----~~~~~- 212 (324)
T cd05589 146 GLCKEGMGF-------GDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEE-----EVFDS- 212 (324)
T ss_pred cCCccCCCC-------CCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHH-----HHHHH-
Confidence 998643211 11122356899999999999989999999999999999999999999653111 11110
Q ss_pred cchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCC-----CHHHHHH
Q 011508 395 LPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERM-----NMEEVAA 461 (484)
Q Consensus 395 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~ 461 (484)
+....... +..++..+.+++.+||+.||++|| ++.++++
T Consensus 213 -------i~~~~~~~---------------------p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 213 -------IVNDEVRY---------------------PRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred -------HHhCCCCC---------------------CCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 10000000 112255688999999999999999 4666654
No 113
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=1.5e-39 Score=321.08 Aligned_cols=207 Identities=24% Similarity=0.309 Sum_probs=170.2
Q ss_pred CCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCc
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
.|++.+.||+|+||+||+|+. ..+++.||+|++.... ......+.+|++++.+++|+||+++++++. +.+
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~--~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~-----~~~ 74 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACK--VDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQ-----DKD 74 (381)
T ss_pred CceEEEEEeecCCEEEEEEEE--CCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEe-----cCC
Confidence 578889999999999999984 4467899999997542 223456889999999999999999999853 455
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCc
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGL 316 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 316 (484)
..++||||+++|+|.+++... ..+++..+..++.|++.||+||| ..+|+||||||+||+++.++.+||+|||+
T Consensus 75 ~~~lv~E~~~gg~L~~~l~~~----~~~~e~~~~~~~~qi~~aL~~LH---~~givHrDlKp~Nili~~~~~~kL~DFGl 147 (381)
T cd05626 75 NLYFVMDYIPGGDMMSLLIRM----EVFPEVLARFYIAELTLAIESVH---KMGFIHRDIKPDNILIDLDGHIKLTDFGL 147 (381)
T ss_pred EEEEEEecCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCcHHHEEECCCCCEEEeeCcC
Confidence 899999999999999998743 34888999999999999999999 89999999999999999999999999999
Q ss_pred ccccccccccCC----------------------------------------CCccccccccccccccCccccCCCCCCc
Q 011508 317 AKFLPEAANNLS----------------------------------------SNQSSSVGVKGTVGYAAPEYGMGSEVST 356 (484)
Q Consensus 317 a~~~~~~~~~~~----------------------------------------~~~~~~~~~~g~~~y~aPE~~~~~~~~~ 356 (484)
+..+........ ..........||..|+|||++.+..++.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~ 227 (381)
T cd05626 148 CTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQ 227 (381)
T ss_pred CcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCC
Confidence 764421110000 0000012346999999999998888999
Q ss_pred ccceehhhHHHHHHHhCCCCCCCC
Q 011508 357 SGDVYSFGILLLEMFTGKGPTNEM 380 (484)
Q Consensus 357 ~~Dvws~Gvvl~elltg~~p~~~~ 380 (484)
++|||||||++|||+||+.||...
T Consensus 228 ~~DiwSlG~il~elltG~~Pf~~~ 251 (381)
T cd05626 228 LCDWWSVGVILFEMLVGQPPFLAP 251 (381)
T ss_pred ccceeehhhHHHHHHhCCCCCcCC
Confidence 999999999999999999999753
No 114
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=2.2e-39 Score=307.97 Aligned_cols=279 Identities=23% Similarity=0.259 Sum_probs=196.5
Q ss_pred CCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcC---CCCCceeEeeeeeeeccCC
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSI---RHRNLVKIITSCVSVDFQG 234 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~~~~~~ 234 (484)
+|++.+.||+|+||.||+|+. ..+++.||+|.++.... .....+.+|+.+++.+ +||||+++++++.......
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~--~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~ 78 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARD--PHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDR 78 (288)
T ss_pred CceEeeEEeecCCeEEEEEEE--CCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCC
Confidence 478889999999999999984 44678899999875432 2234566777777665 7999999999876544444
Q ss_pred CceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEccc
Q 011508 235 NDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDF 314 (484)
Q Consensus 235 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 314 (484)
....++||||++ ++|.+++.... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+||
T Consensus 79 ~~~~~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dikp~Nili~~~~~~kl~df 152 (288)
T cd07863 79 ETKVTLVFEHVD-QDLRTYLDKVP--PPGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGQVKLADF 152 (288)
T ss_pred CceEEEEEcccc-cCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECcc
Confidence 567899999996 58999887432 234899999999999999999999 899999999999999999999999999
Q ss_pred CcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhh
Q 011508 315 GLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEA 394 (484)
Q Consensus 315 g~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 394 (484)
|++....... ......++..|+|||++.+..++.++||||+||++|||++|++||...... ..+.+.....
T Consensus 153 g~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~-~~~~~~~~~~ 223 (288)
T cd07863 153 GLARIYSCQM--------ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA-DQLGKIFDLI 223 (288)
T ss_pred CccccccCcc--------cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHH-HHHHHHHHHh
Confidence 9998653221 112245789999999998889999999999999999999999998653211 1111111110
Q ss_pred cchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 395 LPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 395 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
....... ....... ... ..... ..........++...+.+++.+|++.||++|||+.|++.
T Consensus 224 ~~~~~~~-~~~~~~~-~~~-~~~~~---~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 224 GLPPEDD-WPRDVTL-PRG-AFSPR---GPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred CCCChhh-Ccccccc-ccc-ccCCC---CCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0000000 0000000 000 00000 000000001123566889999999999999999999875
No 115
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=1.3e-39 Score=315.05 Aligned_cols=248 Identities=23% Similarity=0.317 Sum_probs=190.4
Q ss_pred CccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcC-CCCCceeEeeeeeeeccCCCceeeE
Q 011508 165 NLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSI-RHRNLVKIITSCVSVDFQGNDFEAL 240 (484)
Q Consensus 165 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~l 240 (484)
+.||+|+||.||+|+.. .++..||+|+++... ......+..|..++..+ +||||+++++++ ..+...++
T Consensus 1 ~~lG~G~~g~V~~~~~~--~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~-----~~~~~~~l 73 (329)
T cd05588 1 RVIGRGSYAKVLLVELK--KTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCF-----QTESRLFF 73 (329)
T ss_pred CeEeeCCCeEEEEEEEC--CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEE-----EcCCEEEE
Confidence 46999999999999844 457889999997542 22335678899999988 799999999985 34458899
Q ss_pred EeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccccc
Q 011508 241 VYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFL 320 (484)
Q Consensus 241 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~ 320 (484)
||||+++|+|.+++... ..+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++..
T Consensus 74 v~e~~~~g~L~~~~~~~----~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~ 146 (329)
T cd05588 74 VIEFVSGGDLMFHMQRQ----RKLPEEHARFYSAEISLALNFLH---ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEG 146 (329)
T ss_pred EEeCCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEECcCcccccc
Confidence 99999999999988633 35899999999999999999999 899999999999999999999999999998743
Q ss_pred ccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCC---ccHhHHHHhhcch
Q 011508 321 PEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGN---LTLHNFVKEALPE 397 (484)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~---~~~~~~~~~~~~~ 397 (484)
... ........||..|+|||++.+..++.++|||||||++|||++|+.||....... ....++....
T Consensus 147 ~~~-------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~--- 216 (329)
T cd05588 147 IRP-------GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQV--- 216 (329)
T ss_pred ccC-------CCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHH---
Confidence 111 111223568999999999999999999999999999999999999996432111 1111111111
Q ss_pred hhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCC------HHHHHH
Q 011508 398 RLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMN------MEEVAA 461 (484)
Q Consensus 398 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt------~~evl~ 461 (484)
+...... .+..+..++.+++.+||+.||.+||+ ++|+++
T Consensus 217 ----~~~~~~~---------------------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05588 217 ----ILEKQIR---------------------IPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKS 261 (329)
T ss_pred ----HHcCCCC---------------------CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence 1110000 01122556889999999999999997 567764
No 116
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=1.3e-39 Score=319.32 Aligned_cols=207 Identities=26% Similarity=0.334 Sum_probs=171.8
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
++|++.+.||+|+||+||+|.. ..+++.||+|+++... ......+.+|+.++.+++|+||+++++.+ .++
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~--~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~-----~~~ 73 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQK--KDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSF-----QDK 73 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEE--CCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEE-----ecC
Confidence 4688999999999999999984 4457899999997532 22335678899999999999999999884 445
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
...++||||+++|+|.+++... ..+++..+..++.|++.||+||| +++|+||||||+|||++.++.+||+|||
T Consensus 74 ~~~~lv~E~~~gg~L~~~l~~~----~~l~~~~~~~~~~qi~~aL~~lH---~~givHrDlKp~NILi~~~~~vkL~DFG 146 (363)
T cd05628 74 LNLYLIMEFLPGGDMMTLLMKK----DTLTEEETQFYIAETVLAIDSIH---QLGFIHRDIKPDNLLLDSKGHVKLSDFG 146 (363)
T ss_pred CeEEEEEcCCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---hCCeEecCCCHHHeEECCCCCEEEeecc
Confidence 5889999999999999999743 35899999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccCC----------------------------CCccccccccccccccCccccCCCCCCcccceehhhHHH
Q 011508 316 LAKFLPEAANNLS----------------------------SNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILL 367 (484)
Q Consensus 316 ~a~~~~~~~~~~~----------------------------~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl 367 (484)
+++.+........ ..........||+.|+|||++.+..++.++|||||||++
T Consensus 147 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil 226 (363)
T cd05628 147 LCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIM 226 (363)
T ss_pred CcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHH
Confidence 9876532110000 000011235799999999999998999999999999999
Q ss_pred HHHHhCCCCCCC
Q 011508 368 LEMFTGKGPTNE 379 (484)
Q Consensus 368 ~elltg~~p~~~ 379 (484)
|||++|+.||..
T Consensus 227 ~ell~G~~Pf~~ 238 (363)
T cd05628 227 YEMLIGYPPFCS 238 (363)
T ss_pred HHHHhCCCCCCC
Confidence 999999999975
No 117
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=1.4e-39 Score=303.83 Aligned_cols=252 Identities=27% Similarity=0.433 Sum_probs=196.4
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCcee
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFE 238 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 238 (484)
++|.+.+.||+|+||.||.|.+.+ +..+|+|.+.... ...+.+.+|+.++++++||||+++++++. .....
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~---~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~ 74 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRG---QYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCT-----KQRPI 74 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecC---CCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEc-----cCCCc
Confidence 457888999999999999998652 3459999887443 23467899999999999999999999864 33467
Q ss_pred eEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccc
Q 011508 239 ALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAK 318 (484)
Q Consensus 239 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~ 318 (484)
++||||+.+|+|.+++.... ..+++..++.++.|++.||+||| +.+++|+||||+||++++++.+||+|||.++
T Consensus 75 ~lv~e~~~~~~l~~~i~~~~---~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~nili~~~~~~kl~d~g~~~ 148 (256)
T cd05113 75 YIVTEYMSNGCLLNYLREHG---KRFQPSQLLEMCKDVCEGMAYLE---SKQFIHRDLAARNCLVDDQGCVKVSDFGLSR 148 (256)
T ss_pred EEEEEcCCCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccCcceEEEcCCCCEEECCCccce
Confidence 99999999999999997432 25899999999999999999999 8999999999999999999999999999987
Q ss_pred ccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhhcch
Q 011508 319 FLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEALPE 397 (484)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 397 (484)
...... ........++..|+|||...+..++.++|||||||++|+|++ |+.||...... .....
T Consensus 149 ~~~~~~------~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~-----~~~~~---- 213 (256)
T cd05113 149 YVLDDE------YTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNS-----ETVEK---- 213 (256)
T ss_pred ecCCCc------eeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHH-----HHHHH----
Confidence 653221 111112335678999999988889999999999999999999 99998643211 01000
Q ss_pred hhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHH
Q 011508 398 RLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLL 464 (484)
Q Consensus 398 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 464 (484)
+....... .+......+.+++.+||+.+|.+||++.++++.|+
T Consensus 214 ----~~~~~~~~--------------------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 214 ----VSQGLRLY--------------------RPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred ----HhcCCCCC--------------------CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 00000000 00111457899999999999999999999998763
No 118
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.4e-39 Score=315.66 Aligned_cols=255 Identities=24% Similarity=0.296 Sum_probs=194.5
Q ss_pred CCCccCccccccceeEEEEEEcC-CCCeeEEEEEEeeccC----ccchHHHHHHHHHHHcC-CCCCceeEeeeeeeeccC
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDH-DDHETLVAVKVLNLQH----RGASKSFIAECQALRSI-RHRNLVKIITSCVSVDFQ 233 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~-~~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 233 (484)
+|++.+.||+|+||.||+++... ..++..||+|++.... ....+.+..|+.++..+ +|+||+++++++ .
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~-----~ 75 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAF-----Q 75 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEE-----e
Confidence 47889999999999999997532 3457889999987432 22335678899999999 599999998874 4
Q ss_pred CCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcc
Q 011508 234 GNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSD 313 (484)
Q Consensus 234 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~D 313 (484)
.+...++||||+++|+|.+++... ..+++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+|
T Consensus 76 ~~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH---~~~ivHrDlkp~Nili~~~~~~kl~D 148 (332)
T cd05614 76 TEAKLHLILDYVSGGEMFTHLYQR----DNFSEDEVRFYSGEIILALEHLH---KLGIVYRDIKLENILLDSEGHVVLTD 148 (332)
T ss_pred cCCEEEEEEeCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCcEecCCCHHHeEECCCCCEEEee
Confidence 556889999999999999998743 34889999999999999999999 89999999999999999999999999
Q ss_pred cCcccccccccccCCCCccccccccccccccCccccCCC-CCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHH
Q 011508 314 FGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGS-EVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVK 392 (484)
Q Consensus 314 fg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 392 (484)
||+++...... ........||..|+|||++.+. .++.++|||||||++|||+||+.||....... .......
T Consensus 149 fG~~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~-~~~~~~~ 221 (332)
T cd05614 149 FGLSKEFLSEE------KERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERN-TQSEVSR 221 (332)
T ss_pred CcCCccccccC------CCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCC-CHHHHHH
Confidence 99987643221 1112235689999999998765 47889999999999999999999996432211 1111111
Q ss_pred hhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCC-----CHHHHHHH
Q 011508 393 EALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERM-----NMEEVAAQ 462 (484)
Q Consensus 393 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~ 462 (484)
.. .. .++.+ +......+.+++.+||+.||++|| +++|+++.
T Consensus 222 ~~-----~~-~~~~~-----------------------~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 267 (332)
T cd05614 222 RI-----LK-CDPPF-----------------------PSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH 267 (332)
T ss_pred HH-----hc-CCCCC-----------------------CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence 00 00 00000 111255678999999999999999 77788753
No 119
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=2.2e-39 Score=307.31 Aligned_cols=272 Identities=26% Similarity=0.370 Sum_probs=202.3
Q ss_pred CCCccCccccccceeEEEEEEc--CCCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCc
Q 011508 160 GFSLENLIGAGSFGSVYKGIFD--HDDHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~--~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
-|.+.+.||+|+||.||.+.+. ...++..||+|.++.... .....+.+|+++++.++|||++++++++... +..
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---~~~ 81 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTED---GGN 81 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecC---CCC
Confidence 4678899999999999999864 234578899999875432 3346789999999999999999999986432 234
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCc
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGL 316 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 316 (484)
..++||||+++++|.+++... ...+++..++.++.|++.||+||| +++++||||||+||+++.++.++|+|||+
T Consensus 82 ~~~lv~e~~~g~~L~~~l~~~---~~~~~~~~~~~i~~~i~~aL~~lH---~~gi~H~dlkp~Nil~~~~~~~~l~dfg~ 155 (284)
T cd05079 82 GIKLIMEFLPSGSLKEYLPRN---KNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGL 155 (284)
T ss_pred ceEEEEEccCCCCHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccchheEEEcCCCCEEECCCcc
Confidence 678999999999999998643 235899999999999999999999 89999999999999999999999999999
Q ss_pred ccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhc-
Q 011508 317 AKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEAL- 395 (484)
Q Consensus 317 a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~- 395 (484)
++.+...... ........++..|+|||.+.+..++.++|||||||++|||+|++.|+...... ..+......
T Consensus 156 ~~~~~~~~~~----~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~---~~~~~~~~~~ 228 (284)
T cd05079 156 TKAIETDKEY----YTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTL---FLKMIGPTHG 228 (284)
T ss_pred ccccccCccc----eeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccch---hhhhcccccc
Confidence 9866432211 11112244677899999988888999999999999999999988765332110 000000000
Q ss_pred ---chhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHH
Q 011508 396 ---PERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSF 466 (484)
Q Consensus 396 ---~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i 466 (484)
.......+.... ....+..++..+.+++.+|++.+|++|||++++++.|+++
T Consensus 229 ~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 229 QMTVTRLVRVLEEGK-------------------RLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred cccHHHHHHHHHcCc-------------------cCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 000000000000 0000223467899999999999999999999999999875
No 120
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=1.4e-39 Score=316.61 Aligned_cols=267 Identities=23% Similarity=0.349 Sum_probs=201.9
Q ss_pred cCCCCccCccccccceeEEEEEEc---CCCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcC-CCCCceeEeeeeeeecc
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFD---HDDHETLVAVKVLNLQHR-GASKSFIAECQALRSI-RHRNLVKIITSCVSVDF 232 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~---~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 232 (484)
.++|++.+.||+|+||.||+|... ...+++.||||+++.... .....+.+|+.++.++ +|+||++++++|..
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~--- 82 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK--- 82 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeec---
Confidence 357999999999999999999843 223467899999975432 2345688999999999 68999999998743
Q ss_pred CCCceeeEEeecccCCCHHHHHhhcCCC----------------------------------------------------
Q 011508 233 QGNDFEALVYELMVNGSLEEWLHLNRDA---------------------------------------------------- 260 (484)
Q Consensus 233 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~---------------------------------------------------- 260 (484)
.+...++||||+++|+|.+++......
T Consensus 83 -~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (343)
T cd05103 83 -PGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDV 161 (343)
T ss_pred -CCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccc
Confidence 334678999999999999998743210
Q ss_pred -----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcccccccccccCCC
Q 011508 261 -----------PRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFLPEAANNLSS 329 (484)
Q Consensus 261 -----------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 329 (484)
...+++.++..++.|++.||+||| +++|+||||||+||+++.++.+||+|||++.........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~--- 235 (343)
T cd05103 162 EEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY--- 235 (343)
T ss_pred hhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCccCeEEEcCCCcEEEEecccccccccCcch---
Confidence 123688889999999999999999 899999999999999999999999999998765322110
Q ss_pred CccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhhcchhhhhhcCcccc
Q 011508 330 NQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLL 408 (484)
Q Consensus 330 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 408 (484)
.......++..|+|||.+.+..++.++||||||+++|||++ |..||....... ....... .. ...
T Consensus 236 --~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-~~~~~~~----~~-------~~~ 301 (343)
T cd05103 236 --VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCRRLK----EG-------TRM 301 (343)
T ss_pred --hhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccH-HHHHHHh----cc-------CCC
Confidence 11112235678999999988889999999999999999997 999986532111 0000000 00 000
Q ss_pred cccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHH
Q 011508 409 VEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRN 468 (484)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~ 468 (484)
. .+..+..++.+++..||+.||++|||+.||++.|+.+.+
T Consensus 302 ~--------------------~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 302 R--------------------APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred C--------------------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 0 001114468899999999999999999999999988754
No 121
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=1.5e-39 Score=304.74 Aligned_cols=255 Identities=29% Similarity=0.479 Sum_probs=199.2
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
.++|++.+.||+|+||.||+|++.. ...||+|.++.... ..+.+.+|++++++++|+||+++++.+. ...
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~---~~~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~------~~~ 74 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNG---TTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS------EEP 74 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecC---CceEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEEC------CCC
Confidence 3568999999999999999998542 24599999875332 3467899999999999999999988742 235
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
.++||||+++|+|.+++.... ...+++..++.++.|++.||+||| +.+++||||||+||++++++.++|+|||.+
T Consensus 75 ~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~Nill~~~~~~~L~dfg~~ 149 (262)
T cd05071 75 IYIVTEYMSKGSLLDFLKGEM--GKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLA 149 (262)
T ss_pred cEEEEEcCCCCcHHHHHhhcc--ccCCCHHHHHHHHHHHHHHHHHHH---HCCccccccCcccEEEcCCCcEEeccCCce
Confidence 689999999999999997432 335789999999999999999999 899999999999999999999999999999
Q ss_pred cccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhhcc
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEALP 396 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 396 (484)
........ .......++..|+|||+..+..++.++||||||+++|||+| |+.||....... ....
T Consensus 150 ~~~~~~~~------~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~-----~~~~--- 215 (262)
T cd05071 150 RLIEDNEY------TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE-----VLDQ--- 215 (262)
T ss_pred eecccccc------ccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHH-----HHHH---
Confidence 76643221 11112346778999999988889999999999999999999 888886532110 0000
Q ss_pred hhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHH
Q 011508 397 ERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSF 466 (484)
Q Consensus 397 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i 466 (484)
+....... ...+++..+.+++.+|++.+|++||++.++++.|++.
T Consensus 216 --~~~~~~~~-----------------------~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 216 --VERGYRMP-----------------------CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred --HhcCCCCC-----------------------CccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 00000000 0122356789999999999999999999999999864
No 122
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=1.2e-39 Score=309.58 Aligned_cols=270 Identities=23% Similarity=0.279 Sum_probs=206.9
Q ss_pred ccHHhHHHhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcC-CCCCceeEeeee
Q 011508 149 VSYQNLFKATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSI-RHRNLVKIITSC 227 (484)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~ 227 (484)
+.++.+....++|++.+.||+|+||.||+|... .+++.+|+|+++... .....+.+|+.+++++ +|+|++++++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~--~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 84 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNK--KNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMY 84 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEEC--CCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeee
Confidence 344555667889999999999999999999854 356789999876432 2335688899999999 799999999988
Q ss_pred eeeccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCC
Q 011508 228 VSVDFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGEL 307 (484)
Q Consensus 228 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~ 307 (484)
.......+...++||||+++++|.+++.........+++..+..++.|++.||.||| +.+++||||||+||+++.++
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nili~~~~ 161 (286)
T cd06638 85 YKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLH---VNKTIHRDVKGNNILLTTEG 161 (286)
T ss_pred eecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHH---hCCccccCCCHHhEEECCCC
Confidence 655545566889999999999999988754333456889999999999999999999 89999999999999999999
Q ss_pred ceEEcccCcccccccccccCCCCccccccccccccccCccccCC-----CCCCcccceehhhHHHHHHHhCCCCCCCCcc
Q 011508 308 TAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-----SEVSTSGDVYSFGILLLEMFTGKGPTNEMFT 382 (484)
Q Consensus 308 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-----~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~ 382 (484)
.++|+|||++....... .......|+..|+|||++.. ..++.++||||+||++|||++|+.||.....
T Consensus 162 ~~kl~dfg~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~ 234 (286)
T cd06638 162 GVKLVDFGVSAQLTSTR-------LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHP 234 (286)
T ss_pred CEEEccCCceeecccCC-------CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCch
Confidence 99999999987653211 11122358899999998753 4578899999999999999999999865311
Q ss_pred CCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 383 GNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
. ..... . .....+.+. .+..+...+.+++.+||+.||++|||+.||++.
T Consensus 235 ~----~~~~~-~-----~~~~~~~~~---------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 235 M----RALFK-I-----PRNPPPTLH---------------------QPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred h----HHHhh-c-----cccCCCccc---------------------CCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 1 00000 0 000000000 011124568899999999999999999999875
No 123
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=1.4e-39 Score=308.76 Aligned_cols=276 Identities=27% Similarity=0.406 Sum_probs=206.9
Q ss_pred CCCCccCccccccceeEEEEEEcC--CCCeeEEEEEEeeccCcc-chHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDH--DDHETLVAVKVLNLQHRG-ASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~--~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
+.|.+.+.||+|+||.||+|++.. ..++..+|+|+++..... ..+.+.+|+++++.++|+||+++++++.. .+.
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~---~~~ 80 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEK---PGG 80 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeec---CCC
Confidence 457778999999999999998652 345788999999865543 45689999999999999999999988643 235
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
...++||||+++++|.+++.... ..+++..++.++.|++.||+||| +.+++|+||||+||+++.++.++|+|||
T Consensus 81 ~~~~lv~e~~~~~~l~~~l~~~~---~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg 154 (284)
T cd05038 81 RSLRLIMEYLPSGSLRDYLQRHR---DQINLKRLLLFSSQICKGMDYLG---SQRYIHRDLAARNILVESEDLVKISDFG 154 (284)
T ss_pred CceEEEEecCCCCCHHHHHHhCc---cccCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHhEEEcCCCCEEEcccc
Confidence 57899999999999999997432 25899999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHH-hh
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVK-EA 394 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~-~~ 394 (484)
.+......... ........++..|+|||...+..++.++||||||+++|||++|+.|+............... ..
T Consensus 155 ~~~~~~~~~~~----~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~ 230 (284)
T cd05038 155 LAKVLPEDKDY----YYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQM 230 (284)
T ss_pred cccccccCCcc----eeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccc
Confidence 99876422211 01111223556799999998889999999999999999999999998653221111000000 00
Q ss_pred cchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHH
Q 011508 395 LPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSF 466 (484)
Q Consensus 395 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i 466 (484)
....+.+.+..... ...+..|+.++.+++.+||+.+|++|||+.||+++|+.+
T Consensus 231 ~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 231 IVTRLLELLKEGER-------------------LPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred cHHHHHHHHHcCCc-------------------CCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 00001111111000 001233467899999999999999999999999999876
No 124
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=1.3e-39 Score=308.24 Aligned_cols=260 Identities=27% Similarity=0.429 Sum_probs=201.3
Q ss_pred CCCCccCccccccceeEEEEEEcC---CCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDH---DDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~---~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
.+|...+.||+|+||.||++...+ ..++..+|+|.+..........+.+|+++++.++|+||+++++++. ..
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~ 79 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCT-----EG 79 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEe-----cC
Confidence 457788999999999999997532 2346689999887665555678999999999999999999999854 34
Q ss_pred ceeeEEeecccCCCHHHHHhhcCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeec
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRD-----------APRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLD 304 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~-----------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~ 304 (484)
...+++|||+++++|.+++..... ....+++..++.++.|++.|++||| +.+++||||||+||+++
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~nil~~ 156 (280)
T cd05092 80 RPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLA---SLHFVHRDLATRNCLVG 156 (280)
T ss_pred CceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHH---HCCeecccccHhhEEEc
Confidence 478999999999999999975431 1135889999999999999999999 89999999999999999
Q ss_pred CCCceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccC
Q 011508 305 GELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTG 383 (484)
Q Consensus 305 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~ 383 (484)
+++.+||+|||++........ ........+++.|+|||...+..++.++|||||||++|||++ |+.||......
T Consensus 157 ~~~~~kL~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~ 231 (280)
T cd05092 157 QGLVVKIGDFGMSRDIYSTDY-----YRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNT 231 (280)
T ss_pred CCCCEEECCCCceeEcCCCce-----eecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHH
Confidence 999999999999875532110 011112235678999999988899999999999999999998 89998653211
Q ss_pred CccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHH
Q 011508 384 NLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQL 463 (484)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 463 (484)
. ... .+..... . ..+..++..+.+++.+||+.||++||+++||++.|
T Consensus 232 ~-----~~~--------~~~~~~~-~-------------------~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l 278 (280)
T cd05092 232 E-----AIE--------CITQGRE-L-------------------ERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRL 278 (280)
T ss_pred H-----HHH--------HHHcCcc-C-------------------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHH
Confidence 0 000 0000000 0 00122356789999999999999999999999988
Q ss_pred H
Q 011508 464 L 464 (484)
Q Consensus 464 ~ 464 (484)
+
T Consensus 279 ~ 279 (280)
T cd05092 279 Q 279 (280)
T ss_pred h
Confidence 6
No 125
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=1.3e-39 Score=319.24 Aligned_cols=258 Identities=22% Similarity=0.277 Sum_probs=195.5
Q ss_pred HHHhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcCCCCCceeEeeeeeee
Q 011508 154 LFKATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSIRHRNLVKIITSCVSV 230 (484)
Q Consensus 154 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 230 (484)
+....++|++.+.||+|+||.||+++.. .+++.+|+|++.... ......+.+|+.+++.++||||+++++++
T Consensus 38 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~--- 112 (370)
T cd05621 38 LQMKAEDYDVVKVIGRGAFGEVQLVRHK--SSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAF--- 112 (370)
T ss_pred cCCCHHHCeEEEEEEecCCeEEEEEEEC--CCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEE---
Confidence 3445578999999999999999999954 457889999986422 22335678899999999999999999884
Q ss_pred ccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceE
Q 011508 231 DFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAH 310 (484)
Q Consensus 231 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~k 310 (484)
.++...++||||+++|+|.+++... .+++..+..++.||+.||+||| +++|+||||||+|||++.++.+|
T Consensus 113 --~~~~~~~lv~Ey~~gg~L~~~l~~~-----~~~~~~~~~~~~qil~aL~~LH---~~~IvHrDLKp~NILl~~~~~~k 182 (370)
T cd05621 113 --QDDKYLYMVMEYMPGGDLVNLMSNY-----DVPEKWAKFYTAEVVLALDAIH---SMGLIHRDVKPDNMLLDKHGHLK 182 (370)
T ss_pred --EcCCEEEEEEcCCCCCcHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEECCCCCEE
Confidence 4456899999999999999999632 3788899999999999999999 89999999999999999999999
Q ss_pred EcccCcccccccccccCCCCccccccccccccccCccccCCC----CCCcccceehhhHHHHHHHhCCCCCCCCccCCcc
Q 011508 311 VSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGS----EVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLT 386 (484)
Q Consensus 311 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~----~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~ 386 (484)
|+|||++....... ........||+.|+|||++.+. .++.++||||+||++|||++|+.||.....
T Consensus 183 L~DFG~a~~~~~~~------~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~---- 252 (370)
T cd05621 183 LADFGTCMKMDETG------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSL---- 252 (370)
T ss_pred EEecccceecccCC------ceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCH----
Confidence 99999998653221 1111235699999999988653 378899999999999999999999975311
Q ss_pred HhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCC--CCCHHHHHHH
Q 011508 387 LHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRE--RMNMEEVAAQ 462 (484)
Q Consensus 387 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPt~~evl~~ 462 (484)
... ...+.+......... .......+.+++..|+..+|.+ |||+.|+++.
T Consensus 253 -~~~--------~~~i~~~~~~~~~p~-----------------~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 253 -VGT--------YSKIMDHKNSLNFPE-----------------DVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred -HHH--------HHHHHhCCcccCCCC-----------------cccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 111 111111100000000 0112456778888888755543 8999999876
No 126
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=3.2e-39 Score=308.05 Aligned_cols=267 Identities=22% Similarity=0.356 Sum_probs=199.1
Q ss_pred CCCCccCccccccceeEEEEEEcC--------------CCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeE
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDH--------------DDHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKI 223 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~--------------~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~ 223 (484)
++|++.+.||+|+||.||++...+ ..+...+|+|++..... .....+.+|+.+++.++|+||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 468999999999999999986432 22345799999875432 234678999999999999999999
Q ss_pred eeeeeeeccCCCceeeEEeecccCCCHHHHHhhcCCC-------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCC
Q 011508 224 ITSCVSVDFQGNDFEALVYELMVNGSLEEWLHLNRDA-------PRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDL 296 (484)
Q Consensus 224 ~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~-------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl 296 (484)
++++. .++..++||||+++++|.+++...... ...+++.+++.++.|++.||+||| +.+++||||
T Consensus 85 ~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dl 156 (296)
T cd05095 85 LAVCI-----TSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLS---SLNFVHRDL 156 (296)
T ss_pred EEEEe-----cCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHH---HCCeecccC
Confidence 99853 344789999999999999999754321 134788899999999999999999 899999999
Q ss_pred CCCCeeecCCCceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh--CC
Q 011508 297 KPSNVLLDGELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT--GK 374 (484)
Q Consensus 297 k~~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt--g~ 374 (484)
||+||+++.++.++|+|||++..+..... ........++..|+|||....+.++.++|||||||++|||++ |.
T Consensus 157 kp~Nili~~~~~~~l~dfg~~~~~~~~~~-----~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~ 231 (296)
T cd05095 157 ATRNCLVGKNYTIKIADFGMSRNLYSGDY-----YRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKE 231 (296)
T ss_pred ChheEEEcCCCCEEeccCcccccccCCcc-----eeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCC
Confidence 99999999999999999999876532211 011112234678999998888889999999999999999998 67
Q ss_pred CCCCCCccCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCC
Q 011508 375 GPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERM 454 (484)
Q Consensus 375 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP 454 (484)
.||...... +.+... ............ ...+..|+..+.+++.+||+.||++||
T Consensus 232 ~p~~~~~~~-----~~~~~~-----~~~~~~~~~~~~----------------~~~~~~~~~~~~~li~~cl~~~p~~Rp 285 (296)
T cd05095 232 QPYSQLSDE-----QVIENT-----GEFFRDQGRQVY----------------LPKPALCPDSLYKLMLSCWRRNAKERP 285 (296)
T ss_pred CCccccChH-----HHHHHH-----HHHHhhcccccc----------------CCCCCCCCHHHHHHHHHHcCCCcccCC
Confidence 787643211 111100 000000000000 000123456789999999999999999
Q ss_pred CHHHHHHHHH
Q 011508 455 NMEEVAAQLL 464 (484)
Q Consensus 455 t~~evl~~L~ 464 (484)
++.||++.|+
T Consensus 286 ~~~~i~~~l~ 295 (296)
T cd05095 286 SFQEIHATLL 295 (296)
T ss_pred CHHHHHHHHh
Confidence 9999999886
No 127
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=1.1e-39 Score=314.54 Aligned_cols=243 Identities=24% Similarity=0.310 Sum_probs=189.6
Q ss_pred CccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcC-CCCCceeEeeeeeeeccCCCceeeE
Q 011508 165 NLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSI-RHRNLVKIITSCVSVDFQGNDFEAL 240 (484)
Q Consensus 165 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~l 240 (484)
+.||+|+||.||+|+.. .+++.||+|+++... ......+..|.+++..+ +||||+++++++ ..+...++
T Consensus 1 ~~lG~G~~g~Vy~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~-----~~~~~~~l 73 (321)
T cd05591 1 KVLGKGSFGKVMLAELK--GTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCF-----QTKDRLFF 73 (321)
T ss_pred CccccCCCeEEEEEEEC--CCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEE-----EcCCeEEE
Confidence 46999999999999854 456789999987532 22335677888888866 899999999985 44558899
Q ss_pred EeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccccc
Q 011508 241 VYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFL 320 (484)
Q Consensus 241 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~ 320 (484)
||||+++|+|..++... ..+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||++...
T Consensus 74 v~E~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~ 146 (321)
T cd05591 74 VMEYVNGGDLMFQIQRS----RKFDEPRSRFYAAEVTLALMFLH---RHGVIYRDLKLDNILLDAEGHCKLADFGMCKEG 146 (321)
T ss_pred EEeCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEeecccceec
Confidence 99999999999988643 35889999999999999999999 899999999999999999999999999998754
Q ss_pred ccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchhhh
Q 011508 321 PEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPERLA 400 (484)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 400 (484)
.... .......|+..|+|||++.+..++.++|||||||++|||++|+.||...... .....
T Consensus 147 ~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~-----~~~~~------- 207 (321)
T cd05591 147 ILNG-------VTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNED-----DLFES------- 207 (321)
T ss_pred ccCC-------ccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHH-----HHHHH-------
Confidence 2211 1122346899999999999889999999999999999999999999753211 11111
Q ss_pred hhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCC-------CHHHHHHH
Q 011508 401 EIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERM-------NMEEVAAQ 462 (484)
Q Consensus 401 ~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-------t~~evl~~ 462 (484)
+....... +..+..++.+++..||+.||++|| +++++++.
T Consensus 208 -i~~~~~~~---------------------p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 208 -ILHDDVLY---------------------PVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred -HHcCCCCC---------------------CCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 11000000 111245688999999999999999 77887754
No 128
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=9.4e-40 Score=314.76 Aligned_cols=237 Identities=25% Similarity=0.310 Sum_probs=186.0
Q ss_pred CccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcC-CCCCceeEeeeeeeeccCCCceeeE
Q 011508 165 NLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSI-RHRNLVKIITSCVSVDFQGNDFEAL 240 (484)
Q Consensus 165 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~l 240 (484)
+.||+|+||.||+|+. ..+++.||+|+++... ....+.+..|..++..+ +||||+++++++ ...+..++
T Consensus 1 ~~lg~G~~g~V~~~~~--~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~-----~~~~~~~i 73 (320)
T cd05590 1 RVLGKGSFGKVMLARL--KESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCF-----QTPDRLFF 73 (320)
T ss_pred CeeeeCCCeEEEEEEE--cCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEE-----EcCCEEEE
Confidence 4699999999999984 4457889999987432 23345677888888876 799999999884 44558899
Q ss_pred EeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccccc
Q 011508 241 VYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFL 320 (484)
Q Consensus 241 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~ 320 (484)
||||+++|+|.+++... ..+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++..
T Consensus 74 v~Ey~~~g~L~~~i~~~----~~l~~~~~~~~~~ql~~~L~~lH---~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~ 146 (320)
T cd05590 74 VMEFVNGGDLMFHIQKS----RRFDEARARFYAAEITSALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEG 146 (320)
T ss_pred EEcCCCCchHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHeEECCCCcEEEeeCCCCeec
Confidence 99999999999988743 35889999999999999999999 899999999999999999999999999998753
Q ss_pred ccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchhhh
Q 011508 321 PEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPERLA 400 (484)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 400 (484)
... ........||+.|+|||++.+..++.++|||||||++|||++|+.||..... .......
T Consensus 147 ~~~-------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~-----~~~~~~i------ 208 (320)
T cd05590 147 IFN-------GKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENE-----DDLFEAI------ 208 (320)
T ss_pred CcC-------CCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH-----HHHHHHH------
Confidence 211 1112234689999999999988999999999999999999999999975321 1111111
Q ss_pred hhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCH
Q 011508 401 EIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNM 456 (484)
Q Consensus 401 ~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~ 456 (484)
....... +.....++.+++.+|++.||++||++
T Consensus 209 --~~~~~~~---------------------~~~~~~~~~~li~~~L~~dP~~R~~~ 241 (320)
T cd05590 209 --LNDEVVY---------------------PTWLSQDAVDILKAFMTKNPTMRLGS 241 (320)
T ss_pred --hcCCCCC---------------------CCCCCHHHHHHHHHHcccCHHHCCCC
Confidence 0000000 11124568899999999999999998
No 129
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=1e-39 Score=315.30 Aligned_cols=242 Identities=24% Similarity=0.290 Sum_probs=188.0
Q ss_pred CCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcCCCC-CceeEeeeeeeeccCCC
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSIRHR-NLVKIITSCVSVDFQGN 235 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~-niv~~~~~~~~~~~~~~ 235 (484)
+|++.+.||+|+||.||+|+.. .+++.||+|++.... ....+.+..|.+++..++|+ +|+++++++ ...
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~--~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~-----~~~ 73 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERK--GTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCF-----QTM 73 (324)
T ss_pred CceEEEEEeeccCeEEEEEEEC--CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEE-----EcC
Confidence 4788899999999999999844 456789999987532 23345678899999999765 477777764 344
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
+..++||||+++|+|.+++... ..+++..+..++.|++.||+||| +++|+||||||+|||++.++.+||+|||
T Consensus 74 ~~~~lv~E~~~~g~L~~~~~~~----~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kL~Dfg 146 (324)
T cd05587 74 DRLYFVMEYVNGGDLMYHIQQV----GKFKEPHAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDAEGHIKIADFG 146 (324)
T ss_pred CEEEEEEcCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEEcCCCCEEEeecC
Confidence 5889999999999999998743 34889999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhc
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEAL 395 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 395 (484)
++...... ........||..|+|||++.+..++.++||||+||++|||+||+.||...... ....
T Consensus 147 ~~~~~~~~-------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~-----~~~~--- 211 (324)
T cd05587 147 MCKENIFG-------GKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED-----ELFQ--- 211 (324)
T ss_pred cceecCCC-------CCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH-----HHHH---
Confidence 98643111 11122346899999999999999999999999999999999999999753211 1111
Q ss_pred chhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCH
Q 011508 396 PERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNM 456 (484)
Q Consensus 396 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~ 456 (484)
.+....... +.....++.+++.+||+.||.+|++.
T Consensus 212 -----~i~~~~~~~---------------------~~~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 212 -----SIMEHNVSY---------------------PKSLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred -----HHHcCCCCC---------------------CCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 111100000 11124567899999999999999986
No 130
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=2.6e-39 Score=311.88 Aligned_cols=204 Identities=23% Similarity=0.338 Sum_probs=163.9
Q ss_pred cCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCceeeEEee
Q 011508 164 ENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFEALVYE 243 (484)
Q Consensus 164 ~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 243 (484)
.++||+|+||.||+|+..+..+++.||+|.+.... ....+.+|+.++++++||||+++++++.. ..+...++|||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~---~~~~~~~lv~e 80 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLS---HADRKVWLLFD 80 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEec---CCCcEEEEEEe
Confidence 46899999999999997665567889999986432 33567899999999999999999988643 23456899999
Q ss_pred cccCCCHHHHHhhcCC-----CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeee----cCCCceEEccc
Q 011508 244 LMVNGSLEEWLHLNRD-----APRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLL----DGELTAHVSDF 314 (484)
Q Consensus 244 ~~~~gsL~~~l~~~~~-----~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll----~~~~~~kl~Df 314 (484)
|+ +++|.+++..... ....+++..+..++.|++.||+||| +++|+||||||+|||+ +.++.+||+||
T Consensus 81 ~~-~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivHrDlkp~Nil~~~~~~~~~~~kl~Df 156 (317)
T cd07868 81 YA-EHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADM 156 (317)
T ss_pred cc-CCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHH---hCCEEcCCCCHHHEEEecCCCCcCcEEEeec
Confidence 99 5688888764321 1235889999999999999999999 8999999999999999 45678999999
Q ss_pred CcccccccccccCCCCccccccccccccccCccccCC-CCCCcccceehhhHHHHHHHhCCCCCCCC
Q 011508 315 GLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-SEVSTSGDVYSFGILLLEMFTGKGPTNEM 380 (484)
Q Consensus 315 g~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~ 380 (484)
|+++....... .........+|+.|+|||++.+ ..++.++||||+||++|||++|+.||...
T Consensus 157 G~a~~~~~~~~----~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~ 219 (317)
T cd07868 157 GFARLFNSPLK----PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred CceeccCCCCc----cccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence 99986533211 1111223568999999998876 45899999999999999999999999754
No 131
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.2e-39 Score=306.23 Aligned_cols=256 Identities=23% Similarity=0.320 Sum_probs=197.3
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
.++|++.+.||+|+||.||+|+.. .+++.||+|++..........+.+|+.++++++||||+++++++.. +..
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~--~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~-----~~~ 80 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNL--HTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLS-----REK 80 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEEC--CCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEe-----CCE
Confidence 357899999999999999999853 3568899999976554455678899999999999999999998643 347
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
.++||||+++++|.++++.. ..+++..+..++.|++.||+||| +.+|+||||+|+||+++.++.++|+|||++
T Consensus 81 ~~iv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nill~~~~~~~l~dfg~~ 153 (267)
T cd06646 81 LWICMEYCGGGSLQDIYHVT----GPLSELQIAYVCRETLQGLAYLH---SKGKMHRDIKGANILLTDNGDVKLADFGVA 153 (267)
T ss_pred EEEEEeCCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCCEEECcCccc
Confidence 89999999999999998632 35889999999999999999999 899999999999999999999999999999
Q ss_pred cccccccccCCCCccccccccccccccCccccC---CCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhh
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGM---GSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEA 394 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 394 (484)
....... .......++..|+|||.+. ...++.++|||||||++|||++|+.||........ ...+...
T Consensus 154 ~~~~~~~-------~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~-~~~~~~~- 224 (267)
T cd06646 154 AKITATI-------AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA-LFLMSKS- 224 (267)
T ss_pred eeecccc-------cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhh-heeeecC-
Confidence 8653211 1112345788999999874 34578899999999999999999999854321100 0000000
Q ss_pred cchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHH
Q 011508 395 LPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQL 463 (484)
Q Consensus 395 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 463 (484)
....+.... ....+..+.+++.+||+.+|++|||++++++.|
T Consensus 225 ------~~~~~~~~~---------------------~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 225 ------NFQPPKLKD---------------------KTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred ------CCCCCCCcc---------------------ccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 000000000 011245788999999999999999999998753
No 132
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=2.3e-39 Score=307.24 Aligned_cols=253 Identities=28% Similarity=0.323 Sum_probs=196.0
Q ss_pred CCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc---cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCc
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR---GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
+|++.+.||+|+||.||++.. ..+++.||+|++..... .....+.+|+.+++.++|+||+++++.+ ..++
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~ 73 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQV--RATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAY-----ETKD 73 (285)
T ss_pred CceEEEEEecCCCeEEEEEEE--cCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeee-----cCCC
Confidence 477889999999999999984 34578899999865322 2234577899999999999999999885 3445
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCc
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGL 316 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 316 (484)
..++||||+++|+|.+++.... ...+++..+..++.|++.||.||| +.+++||||||+||++++++.++|+|||+
T Consensus 74 ~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~ 148 (285)
T cd05605 74 ALCLVLTLMNGGDLKFHIYNMG--NPGFDEERAVFYAAEITCGLEDLH---RERIVYRDLKPENILLDDYGHIRISDLGL 148 (285)
T ss_pred eEEEEEeccCCCcHHHHHHhcC--cCCCCHHHHHHHHHHHHHHHHHHH---HCCcEecCCCHHHEEECCCCCEEEeeCCC
Confidence 8899999999999998886432 345899999999999999999999 89999999999999999999999999999
Q ss_pred ccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcc
Q 011508 317 AKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALP 396 (484)
Q Consensus 317 a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 396 (484)
+....... ......|+..|+|||++.+..++.++||||+||++|||++|+.||...... ..... +...
T Consensus 149 ~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~-~~~~~-~~~~-- 216 (285)
T cd05605 149 AVEIPEGE--------TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEK-VKREE-VERR-- 216 (285)
T ss_pred ceecCCCC--------ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchh-hHHHH-HHHH--
Confidence 87653211 112235889999999998888999999999999999999999999753211 00000 1000
Q ss_pred hhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCC-----CHHHHHHH
Q 011508 397 ERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERM-----NMEEVAAQ 462 (484)
Q Consensus 397 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~ 462 (484)
+...... .+...+..+.+++..||+.||++|| +++++++.
T Consensus 217 ------~~~~~~~--------------------~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 217 ------VKEDQEE--------------------YSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred ------hhhcccc--------------------cCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 0000000 0112255688999999999999999 88888764
No 133
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=2.9e-39 Score=301.69 Aligned_cols=250 Identities=30% Similarity=0.428 Sum_probs=195.3
Q ss_pred CCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCceee
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFEA 239 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 239 (484)
+|++.+.||+|+||.||+|.+. .+..+|+|.+.... .....+.+|++++++++|+||+++++++. .....+
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~---~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~ 75 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWR---GKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCT-----KQRPIF 75 (256)
T ss_pred HcchhhhhccCCCceEEEeEec---CCccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEc-----CCCceE
Confidence 4788899999999999999864 34679999886432 23457889999999999999999999853 445789
Q ss_pred EEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcccc
Q 011508 240 LVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKF 319 (484)
Q Consensus 240 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~ 319 (484)
+||||+++++|.+++.... ..+++..++.++.|++.||+||| +.+++||||||+||++++++.+||+|||.++.
T Consensus 76 lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~ 149 (256)
T cd05059 76 IVTEYMANGCLLNYLRERK---GKLGTEWLLDMCSDVCEAMEYLE---SNGFIHRDLAARNCLVGEDNVVKVSDFGLARY 149 (256)
T ss_pred EEEecCCCCCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHH---HCCcccccccHhhEEECCCCcEEECCccccee
Confidence 9999999999999997433 25899999999999999999999 89999999999999999999999999999876
Q ss_pred cccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhhcchh
Q 011508 320 LPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEALPER 398 (484)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 398 (484)
...... .......++..|+|||...+..++.++||||||+++||+++ |+.||...... ......
T Consensus 150 ~~~~~~------~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~~------- 214 (256)
T cd05059 150 VLDDQY------TSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNS--EVVESV------- 214 (256)
T ss_pred cccccc------cccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHH--HHHHHH-------
Confidence 532110 11111224567999999988899999999999999999999 89998653211 000000
Q ss_pred hhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHH
Q 011508 399 LAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQL 463 (484)
Q Consensus 399 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 463 (484)
....... .+..++.++.+++.+||+.+|++|||+.|+++.|
T Consensus 215 -~~~~~~~-----------------------~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 215 -SAGYRLY-----------------------RPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred -HcCCcCC-----------------------CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 0000000 0112366799999999999999999999999886
No 134
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=6.2e-40 Score=317.85 Aligned_cols=254 Identities=22% Similarity=0.253 Sum_probs=195.7
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc---cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR---GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
++|.+.+.||+|+||.||+|+. ..+++.||+|+++.... ...+.+.+|+.+++.++|+||+++++++ ..+
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~--~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~-----~~~ 73 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVRE--KATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAF-----QDK 73 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEE--CCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEE-----ecC
Confidence 4688999999999999999984 44578899999975432 2345678899999999999999999874 345
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
...++||||+++|+|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||
T Consensus 74 ~~~~lv~e~~~~~~L~~~l~~~~---~~l~~~~~~~~~~qi~~aL~~lH---~~~i~H~Dlkp~NIll~~~~~~kL~Dfg 147 (330)
T cd05601 74 DNLYLVMEYQPGGDLLSLLNRYE---DQFDEDMAQFYLAELVLAIHSVH---QMGYVHRDIKPENVLIDRTGHIKLADFG 147 (330)
T ss_pred CeEEEEECCCCCCCHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCeEcccCchHheEECCCCCEEeccCC
Confidence 58899999999999999997542 35899999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccC------CCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhH
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGM------GSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHN 389 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~------~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~ 389 (484)
++..+..... .......||+.|+|||++. ...++.++|||||||++|||++|+.||...... .
T Consensus 148 ~a~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~-----~ 216 (330)
T cd05601 148 SAARLTANKM------VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSA-----K 216 (330)
T ss_pred CCeECCCCCc------eeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHH-----H
Confidence 9986633211 1112346899999999876 456789999999999999999999999653211 1
Q ss_pred HHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 390 FVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 390 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
... .+........... .......+.+++..|++ +|++|||++++++.
T Consensus 217 ~~~--------~i~~~~~~~~~~~-----------------~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h 263 (330)
T cd05601 217 TYN--------NIMNFQRFLKFPE-----------------DPKVSSDFLDLIQSLLC-GQKERLGYEGLCCH 263 (330)
T ss_pred HHH--------HHHcCCCccCCCC-----------------CCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence 111 1110000000000 01124567889999998 99999999999853
No 135
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=2.5e-39 Score=305.68 Aligned_cols=248 Identities=23% Similarity=0.318 Sum_probs=189.6
Q ss_pred cccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCceeeEEee
Q 011508 167 IGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFEALVYE 243 (484)
Q Consensus 167 lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 243 (484)
||+|+||.||++... .+++.||+|.+.... ......+..|++++++++||||+++++++ ..+...++|||
T Consensus 1 lg~G~~g~Vy~~~~~--~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~-----~~~~~~~lv~e 73 (277)
T cd05607 1 LGKGGFGEVCAVQVK--NTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAF-----ESKTHLCLVMS 73 (277)
T ss_pred CCCCCceEEEEEEEc--cCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEE-----ecCCeEEEEEe
Confidence 799999999999854 357889999986432 12234556799999999999999998874 44568899999
Q ss_pred cccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcccccccc
Q 011508 244 LMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFLPEA 323 (484)
Q Consensus 244 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~~~~ 323 (484)
|+++++|.+++.... ...+++..++.++.|++.||+||| +.+|+||||||+||+++.++.++|+|||++......
T Consensus 74 ~~~g~~L~~~~~~~~--~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~ 148 (277)
T cd05607 74 LMNGGDLKYHIYNVG--ERGLEMERVIHYSAQITCGILHLH---SMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDG 148 (277)
T ss_pred cCCCCCHHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHH---HCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCC
Confidence 999999998886432 234889999999999999999999 899999999999999999999999999998765322
Q ss_pred cccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchhhhhhc
Q 011508 324 ANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPERLAEIV 403 (484)
Q Consensus 324 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (484)
. ......|+..|+|||++.+..++.++||||+||++|||++|+.||...... ......... ..
T Consensus 149 ~--------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~-~~~~~~~~~--------~~ 211 (277)
T cd05607 149 K--------TITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEK-VAKEELKRR--------TL 211 (277)
T ss_pred c--------eeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcch-hhHHHHHHH--------hh
Confidence 1 112235889999999998888999999999999999999999998653211 111111111 11
Q ss_pred CcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHH
Q 011508 404 DPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQL 463 (484)
Q Consensus 404 d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 463 (484)
...... .......++.+++..||+.||++||+++|+++.+
T Consensus 212 ~~~~~~--------------------~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~ 251 (277)
T cd05607 212 EDEVKF--------------------EHQNFTEESKDICRLFLAKKPEDRLGSREKNDDP 251 (277)
T ss_pred cccccc--------------------ccccCCHHHHHHHHHHhccCHhhCCCCccchhhh
Confidence 000000 0011255688999999999999999998776443
No 136
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=1.2e-39 Score=308.02 Aligned_cols=261 Identities=26% Similarity=0.390 Sum_probs=201.9
Q ss_pred cCCCCccCccccccceeEEEEEEcCC---CCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccC
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHD---DHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQ 233 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~---~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 233 (484)
.++|++.+.||+|+||.||+|..... .....||+|.+..... .....+.+|+.+++.++|+||+++++++.
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~----- 79 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVS----- 79 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEc-----
Confidence 35788899999999999999986532 2457899999865432 23457889999999999999999999853
Q ss_pred CCceeeEEeecccCCCHHHHHhhcCCC------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCC
Q 011508 234 GNDFEALVYELMVNGSLEEWLHLNRDA------PRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGEL 307 (484)
Q Consensus 234 ~~~~~~lv~e~~~~gsL~~~l~~~~~~------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~ 307 (484)
.....++||||+++++|.+++...... ...+++..++.++.|++.||.||| +.+++||||||+||+++.++
T Consensus 80 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~di~p~nill~~~~ 156 (277)
T cd05032 80 TGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLA---AKKFVHRDLAARNCMVAEDL 156 (277)
T ss_pred CCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccChheEEEcCCC
Confidence 345789999999999999999754321 224788999999999999999999 89999999999999999999
Q ss_pred ceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCcc
Q 011508 308 TAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLT 386 (484)
Q Consensus 308 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~ 386 (484)
.+||+|||+++........ .......++..|+|||.+.+..++.++|||||||++||+++ |+.||...... .
T Consensus 157 ~~kl~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~--~ 229 (277)
T cd05032 157 TVKIGDFGMTRDIYETDYY-----RKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNE--E 229 (277)
T ss_pred CEEECCcccchhhccCccc-----ccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHH--H
Confidence 9999999998765332210 11122346788999999988889999999999999999998 99998642111 1
Q ss_pred HhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHH
Q 011508 387 LHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLL 464 (484)
Q Consensus 387 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 464 (484)
..+... +..... .+..++..+.+++.+||+.+|++|||+.|+++.|+
T Consensus 230 ~~~~~~-----------~~~~~~--------------------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 230 VLKFVI-----------DGGHLD--------------------LPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred HHHHHh-----------cCCCCC--------------------CCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 111110 000000 01223567899999999999999999999999886
No 137
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2e-39 Score=309.23 Aligned_cols=252 Identities=22% Similarity=0.300 Sum_probs=199.6
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
..+|++.+.||+|+||.||+|+. ..++..|++|.+........+.+.+|+.+++.++|+|++++++.+.. +..
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~--~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~-----~~~ 91 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMD--VATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV-----GDE 91 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEE--CCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEe-----CCE
Confidence 35789999999999999999984 34567899999987665556788999999999999999999998643 448
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
.++||||+++++|.+++.. ..+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||.+
T Consensus 92 ~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~i~~ql~~aL~~LH---~~gi~H~dLkp~Nill~~~~~~kl~dfg~~ 163 (296)
T cd06654 92 LWVVMEYLAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFC 163 (296)
T ss_pred EEEeecccCCCCHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEECccccc
Confidence 8999999999999999863 23788999999999999999999 899999999999999999999999999998
Q ss_pred cccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcch
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPE 397 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 397 (484)
....... .......++..|+|||.+.+..++.++|||||||++|+|++|+.||....... .+.. ....
T Consensus 164 ~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~----~~~~-~~~~ 231 (296)
T cd06654 164 AQITPEQ-------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR----ALYL-IATN 231 (296)
T ss_pred hhccccc-------cccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHH----hHHH-HhcC
Confidence 7653221 11122358889999999988889999999999999999999999996532111 0100 0000
Q ss_pred hhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 398 RLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 398 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
. .+.+.. +......+.+++.+||..+|++|||+.|+++.
T Consensus 232 ~-----~~~~~~---------------------~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 232 G-----TPELQN---------------------PEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred C-----CCCCCC---------------------ccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 0 000000 11224568899999999999999999999874
No 138
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=2.7e-39 Score=301.19 Aligned_cols=249 Identities=26% Similarity=0.379 Sum_probs=191.9
Q ss_pred CccccccceeEEEEEEcCCCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCceeeEEee
Q 011508 165 NLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFEALVYE 243 (484)
Q Consensus 165 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 243 (484)
+.||+|+||.||+|+.. .+++.+|+|.+..... .....+.+|++++++++||||++++++|. .....++|||
T Consensus 1 ~~lg~g~~g~vy~~~~~--~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~lv~e 73 (252)
T cd05084 1 ERIGRGNFGEVFSGRLR--ADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCT-----QKQPIYIVME 73 (252)
T ss_pred CccCcccCccEEEEEEe--cCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-----CCCCeEEEEe
Confidence 46999999999999854 3567899998764432 23457899999999999999999999864 3447899999
Q ss_pred cccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcccccccc
Q 011508 244 LMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFLPEA 323 (484)
Q Consensus 244 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~~~~ 323 (484)
|+++++|.+++... ...+++..++.++.|++.||+||| +++++||||||+||+++.++.+||+|||.+......
T Consensus 74 ~~~~~~L~~~~~~~---~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 147 (252)
T cd05084 74 LVQGGDFLTFLRTE---GPRLKVKELIQMVENAAAGMEYLE---SKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDG 147 (252)
T ss_pred eccCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchheEEEcCCCcEEECccccCcccccc
Confidence 99999999999632 235889999999999999999999 899999999999999999999999999998754321
Q ss_pred cccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhhcchhhhhh
Q 011508 324 ANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEALPERLAEI 402 (484)
Q Consensus 324 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (484)
.. .........+..|+|||.+.+..++.++||||||+++|||++ |..||...... . ....
T Consensus 148 ~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~--~------------~~~~ 208 (252)
T cd05084 148 VY-----ASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQ--Q------------TREA 208 (252)
T ss_pred cc-----cccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHH--H------------HHHH
Confidence 10 000011123467999999988889999999999999999998 88888643111 0 0000
Q ss_pred cCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHH
Q 011508 403 VDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLL 464 (484)
Q Consensus 403 ~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 464 (484)
+...... ..+..++..+.+++.+|++.+|++|||+.||+++|+
T Consensus 209 ~~~~~~~-------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 209 IEQGVRL-------------------PCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred HHcCCCC-------------------CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 0000000 001223567899999999999999999999999885
No 139
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=6.7e-39 Score=301.70 Aligned_cols=254 Identities=26% Similarity=0.381 Sum_probs=194.8
Q ss_pred CccccccceeEEEEEEcCCCCeeEEEEEEeeccC-ccchHHHHHHHHHHHcC-CCCCceeEeeeeeeeccCCCceeeEEe
Q 011508 165 NLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH-RGASKSFIAECQALRSI-RHRNLVKIITSCVSVDFQGNDFEALVY 242 (484)
Q Consensus 165 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv~ 242 (484)
+.||+|+||.||+|+..+++....+++|.++... ....+.+.+|++++.++ +||||+++++++.. ....++||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-----~~~~~lv~ 75 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH-----RGYLYLAI 75 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEec-----CCCceEEE
Confidence 4699999999999997654444568888887432 23346788999999999 89999999998643 44789999
Q ss_pred ecccCCCHHHHHhhcCC------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceE
Q 011508 243 ELMVNGSLEEWLHLNRD------------APRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAH 310 (484)
Q Consensus 243 e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~k 310 (484)
||+++|+|.+++..... ....+++.+++.++.|++.||+||| +.+++||||||+||++++++.+|
T Consensus 76 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH---~~~i~H~dikp~nili~~~~~~k 152 (270)
T cd05047 76 EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAK 152 (270)
T ss_pred EeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccccceEEEcCCCeEE
Confidence 99999999999975431 1234789999999999999999999 89999999999999999999999
Q ss_pred EcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhH
Q 011508 311 VSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHN 389 (484)
Q Consensus 311 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~ 389 (484)
|+|||++....... .......+..|+|||++....++.++|||||||++|||++ |..||..... ..
T Consensus 153 l~dfgl~~~~~~~~--------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~-----~~ 219 (270)
T cd05047 153 IADFGLSRGQEVYV--------KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC-----AE 219 (270)
T ss_pred ECCCCCccccchhh--------hccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCH-----HH
Confidence 99999886322110 0111224567999999988889999999999999999997 9999865311 11
Q ss_pred HHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHH
Q 011508 390 FVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFR 467 (484)
Q Consensus 390 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~ 467 (484)
..... ......+ .+..+..++.+++.+|++.+|.+|||+.|++..|+.+.
T Consensus 220 ~~~~~---------~~~~~~~-------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 220 LYEKL---------PQGYRLE-------------------KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred HHHHH---------hCCCCCC-------------------CCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 11110 0000000 01122557889999999999999999999999998764
No 140
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=2.7e-39 Score=305.61 Aligned_cols=262 Identities=28% Similarity=0.427 Sum_probs=200.0
Q ss_pred hcCCCCccCccccccceeEEEEEEcCCC---CeeEEEEEEeeccCcc-chHHHHHHHHHHHcCCCCCceeEeeeeeeecc
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHDD---HETLVAVKVLNLQHRG-ASKSFIAECQALRSIRHRNLVKIITSCVSVDF 232 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~---~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 232 (484)
.+++|.+.+.||+|++|.||+|.+.... .+..||+|.+...... ....+.+|+.++++++|+||+++++++..
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--- 80 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFE--- 80 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEcc---
Confidence 3467899999999999999999975422 4678999988644332 33568999999999999999999998543
Q ss_pred CCCceeeEEeecccCCCHHHHHhhcCC---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCC--
Q 011508 233 QGNDFEALVYELMVNGSLEEWLHLNRD---APRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGEL-- 307 (484)
Q Consensus 233 ~~~~~~~lv~e~~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~-- 307 (484)
....++||||+++++|.+++..... ....+++..++.++.||+.||+||| +++++||||||+||+++.++
T Consensus 81 --~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~nil~~~~~~~ 155 (277)
T cd05036 81 --RLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLE---ENHFIHRDIAARNCLLTCKGPG 155 (277)
T ss_pred --CCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccchheEEEeccCCC
Confidence 3467899999999999999975432 1235899999999999999999999 88999999999999998754
Q ss_pred -ceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCc
Q 011508 308 -TAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNL 385 (484)
Q Consensus 308 -~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~ 385 (484)
.+||+|||+++........ ........+..|+|||++.+..++.++|||||||++|||++ |..||......
T Consensus 156 ~~~kl~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~-- 228 (277)
T cd05036 156 RVAKIADFGMARDIYRASYY-----RKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ-- 228 (277)
T ss_pred cceEeccCccccccCCccce-----ecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--
Confidence 6999999999866322110 00111223568999999988899999999999999999997 99998653211
Q ss_pred cHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHH
Q 011508 386 TLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLL 464 (484)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 464 (484)
.+.+.+. ...... .+..++..+.+++.+|++.+|++|||+.+|++.|+
T Consensus 229 ~~~~~~~------------~~~~~~-------------------~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 229 EVMEFVT------------GGGRLD-------------------PPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred HHHHHHH------------cCCcCC-------------------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 1111110 000000 01223567899999999999999999999999885
No 141
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=3.3e-39 Score=302.47 Aligned_cols=257 Identities=25% Similarity=0.393 Sum_probs=193.1
Q ss_pred CccccccceeEEEEEEcCC-CCeeEEEEEEeeccC-ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCceeeEEe
Q 011508 165 NLIGAGSFGSVYKGIFDHD-DHETLVAVKVLNLQH-RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFEALVY 242 (484)
Q Consensus 165 ~~lg~G~~g~Vy~~~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 242 (484)
+.||+|+||.||+|.+.+. .....+|+|.+.... ....+.+.+|+.+++.++|||++++++++. ..+...++|+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~----~~~~~~~lv~ 76 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICL----PSEGSPLVVL 76 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEee----cCCCCcEEEE
Confidence 4689999999999986532 345789999885432 233467889999999999999999999764 2334578999
Q ss_pred ecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccccccc
Q 011508 243 ELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFLPE 322 (484)
Q Consensus 243 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~~~ 322 (484)
||+.+|+|.+++.... ...++..++.++.|++.||+||| +.+++||||||+||++++++.+||+|||+++....
T Consensus 77 e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~ 150 (262)
T cd05058 77 PYMKHGDLRNFIRSET---HNPTVKDLIGFGLQVAKGMEYLA---SKKFVHRDLAARNCMLDESFTVKVADFGLARDIYD 150 (262)
T ss_pred ecCCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---hCCccccccCcceEEEcCCCcEEECCccccccccC
Confidence 9999999999997432 34677888999999999999999 89999999999999999999999999999875532
Q ss_pred ccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhC-CCCCCCCccCCccHhHHHHhhcchhhhh
Q 011508 323 AANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTG-KGPTNEMFTGNLTLHNFVKEALPERLAE 401 (484)
Q Consensus 323 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (484)
..... ........++..|+|||.+.+..++.++|||||||++|||++| .+||.... ..+.....
T Consensus 151 ~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~-----~~~~~~~~------- 215 (262)
T cd05058 151 KEYYS---VHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVD-----SFDITVYL------- 215 (262)
T ss_pred Cccee---ecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHHH-------
Confidence 21000 0111123456789999999888899999999999999999995 55554321 11111100
Q ss_pred hcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHH
Q 011508 402 IVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFR 467 (484)
Q Consensus 402 ~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~ 467 (484)
....... .+..++..+.+++..||+.+|++||++.||++.|+++.
T Consensus 216 -~~~~~~~--------------------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 216 -LQGRRLL--------------------QPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred -hcCCCCC--------------------CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence 0000000 01122457889999999999999999999999998875
No 142
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=1.7e-39 Score=320.42 Aligned_cols=207 Identities=24% Similarity=0.312 Sum_probs=169.8
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
++|++.+.||+|+||.||++.. ..+++.||+|++.... ....+.+.+|++++++++||||+++++++ .++
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~--~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~-----~~~ 73 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQK--KDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSF-----QDA 73 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEE--CCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEE-----EcC
Confidence 4688999999999999999984 4467889999986432 22345678899999999999999999985 445
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
.+.++||||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||
T Consensus 74 ~~~~lv~E~~~gg~L~~~l~~~----~~~~~~~~~~~~~ql~~aL~~LH---~~givHrDlkp~NIll~~~~~~kl~DfG 146 (377)
T cd05629 74 QYLYLIMEFLPGGDLMTMLIKY----DTFSEDVTRFYMAECVLAIEAVH---KLGFIHRDIKPDNILIDRGGHIKLSDFG 146 (377)
T ss_pred CeeEEEEeCCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEECCCCCEEEeecc
Confidence 5899999999999999999743 35888999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccC------CC--Cc--------------------------------cccccccccccccCccccCCCCCC
Q 011508 316 LAKFLPEAANNL------SS--NQ--------------------------------SSSVGVKGTVGYAAPEYGMGSEVS 355 (484)
Q Consensus 316 ~a~~~~~~~~~~------~~--~~--------------------------------~~~~~~~g~~~y~aPE~~~~~~~~ 355 (484)
+++.+....... .. .. .......||+.|+|||++.+..++
T Consensus 147 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 226 (377)
T cd05629 147 LSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYG 226 (377)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCC
Confidence 986432111000 00 00 000124699999999999988999
Q ss_pred cccceehhhHHHHHHHhCCCCCCC
Q 011508 356 TSGDVYSFGILLLEMFTGKGPTNE 379 (484)
Q Consensus 356 ~~~Dvws~Gvvl~elltg~~p~~~ 379 (484)
.++|||||||++|||++|+.||..
T Consensus 227 ~~~DiwSlGvil~elltG~~Pf~~ 250 (377)
T cd05629 227 QECDWWSLGAIMFECLIGWPPFCS 250 (377)
T ss_pred CceeeEecchhhhhhhcCCCCCCC
Confidence 999999999999999999999965
No 143
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=1.9e-39 Score=337.28 Aligned_cols=269 Identities=24% Similarity=0.324 Sum_probs=202.7
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc---cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR---GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
++|++.+.||+|+||.||+|+. ..+++.||+|++..... ...+.+.+|++++++++||||+++++++. ++
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d--~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~-----d~ 74 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYD--PVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICS-----DG 74 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEE--CCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEe-----eC
Confidence 5789999999999999999984 44578899999875432 22357889999999999999999999864 34
Q ss_pred ceeeEEeecccCCCHHHHHhhcCC-------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCc
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRD-------APRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELT 308 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~-------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~ 308 (484)
+..++||||+++|+|.+++..... ....+++..++.++.||++||+||| +++|+||||||+||+++.++.
T Consensus 75 ~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLH---s~GIIHRDLKPeNILLd~dg~ 151 (932)
T PRK13184 75 DPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVH---SKGVLHRDLKPDNILLGLFGE 151 (932)
T ss_pred CEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHH---HCCccccCCchheEEEcCCCC
Confidence 578999999999999999874321 1234677888999999999999999 899999999999999999999
Q ss_pred eEEcccCcccccccccccC-----------CCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCC
Q 011508 309 AHVSDFGLAKFLPEAANNL-----------SSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPT 377 (484)
Q Consensus 309 ~kl~Dfg~a~~~~~~~~~~-----------~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~ 377 (484)
+||+|||+++......... ...........||+.|+|||++.+..++.++|||||||++|||+||+.||
T Consensus 152 vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF 231 (932)
T PRK13184 152 VVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPY 231 (932)
T ss_pred EEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCC
Confidence 9999999998762211000 00011112346999999999999999999999999999999999999999
Q ss_pred CCCccCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCC-CH
Q 011508 378 NEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERM-NM 456 (484)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-t~ 456 (484)
.......... .. .+.++.-.. ...+++..+.+++.+|++.||++|| ++
T Consensus 232 ~~~~~~ki~~----~~-------~i~~P~~~~--------------------p~~~iP~~L~~LI~rcL~~DP~kR~ss~ 280 (932)
T PRK13184 232 RRKKGRKISY----RD-------VILSPIEVA--------------------PYREIPPFLSQIAMKALAVDPAERYSSV 280 (932)
T ss_pred CCcchhhhhh----hh-------hccChhhcc--------------------ccccCCHHHHHHHHHHccCChhhCcCHH
Confidence 6521111000 00 000000000 0112356788999999999999996 67
Q ss_pred HHHHHHHHHHHH
Q 011508 457 EEVAAQLLSFRN 468 (484)
Q Consensus 457 ~evl~~L~~i~~ 468 (484)
+++.+.|+.+.+
T Consensus 281 eeLl~~Le~~lq 292 (932)
T PRK13184 281 QELKQDLEPHLQ 292 (932)
T ss_pred HHHHHHHHHHHh
Confidence 777787877654
No 144
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=1.9e-39 Score=312.14 Aligned_cols=241 Identities=24% Similarity=0.338 Sum_probs=185.6
Q ss_pred CccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcC-CCCCceeEeeeeeeeccCCCceeeE
Q 011508 165 NLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSI-RHRNLVKIITSCVSVDFQGNDFEAL 240 (484)
Q Consensus 165 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~l 240 (484)
+.||+|+||.||+|+.. .+++.||+|+++... ....+.+..|..++..+ +||||+++++++ ..+...++
T Consensus 1 ~~lG~G~~g~Vy~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~-----~~~~~~~l 73 (316)
T cd05592 1 KVLGKGSFGKVMLAELK--GTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTF-----QTKEHLFF 73 (316)
T ss_pred CeeeeCCCeEEEEEEEC--CCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEE-----EcCCEEEE
Confidence 46999999999999854 456789999997542 22334556677777654 899999999884 44558899
Q ss_pred EeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccccc
Q 011508 241 VYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFL 320 (484)
Q Consensus 241 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~ 320 (484)
||||+++|+|.+++... ..+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++..
T Consensus 74 v~e~~~gg~L~~~~~~~----~~~~~~~~~~~~~qi~~al~~LH---~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~ 146 (316)
T cd05592 74 VMEYLNGGDLMFHIQSS----GRFDEARARFYAAEIICGLQFLH---KKGIIYRDLKLDNVLLDKDGHIKIADFGMCKEN 146 (316)
T ss_pred EEcCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCEEeCCCCHHHeEECCCCCEEEccCcCCeEC
Confidence 99999999999998743 35889999999999999999999 899999999999999999999999999998754
Q ss_pred ccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchhhh
Q 011508 321 PEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPERLA 400 (484)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 400 (484)
.... .......||..|+|||++.+..++.++|||||||++|||++|+.||..... .+........
T Consensus 147 ~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~-----~~~~~~i~~~--- 211 (316)
T cd05592 147 MNGE-------GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDE-----DELFDSILND--- 211 (316)
T ss_pred CCCC-------CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHcC---
Confidence 2211 122234689999999999988999999999999999999999999975321 1111110000
Q ss_pred hhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHH-HHH
Q 011508 401 EIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNME-EVA 460 (484)
Q Consensus 401 ~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~-evl 460 (484)
.+.+ +..+..++.+++..||+.||++||++. +++
T Consensus 212 ---~~~~-----------------------~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05592 212 ---RPHF-----------------------PRWISKEAKDCLSKLFERDPTKRLGVDGDIR 246 (316)
T ss_pred ---CCCC-----------------------CCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 0000 111245678999999999999999976 443
No 145
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=3.5e-39 Score=301.23 Aligned_cols=250 Identities=30% Similarity=0.415 Sum_probs=197.6
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCcee
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFE 238 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 238 (484)
.+|.+.+.||+|+||.||++... +..+|+|.++... ..+.+.+|+.++++++|+|++++++++. ..+...
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~----~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~----~~~~~~ 75 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR----GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIV----EEKGGL 75 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc----CCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEE----cCCCce
Confidence 46888999999999999999754 5678999886432 3467889999999999999999998753 334567
Q ss_pred eEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccc
Q 011508 239 ALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAK 318 (484)
Q Consensus 239 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~ 318 (484)
++|+||+++++|.++++... ...+++..++.++.|++.||+||| +++++||||||+||++++++.+||+|||++.
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~ 150 (256)
T cd05082 76 YIVTEYMAKGSLVDYLRSRG--RSVLGGDCLLKFSLDVCEAMEYLE---ANNFVHRDLAARNVLVSEDNVAKVSDFGLTK 150 (256)
T ss_pred EEEEECCCCCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHH---hCCEeccccchheEEEcCCCcEEecCCccce
Confidence 99999999999999997533 234889999999999999999999 8999999999999999999999999999987
Q ss_pred ccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhhcch
Q 011508 319 FLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEALPE 397 (484)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 397 (484)
...... ....++..|+|||++.+..++.++|||||||++|||++ |+.||... .........
T Consensus 151 ~~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~-----~~~~~~~~~--- 212 (256)
T cd05082 151 EASSTQ----------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI-----PLKDVVPRV--- 212 (256)
T ss_pred eccccC----------CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCC-----CHHHHHHHH---
Confidence 542211 11234568999999988889999999999999999998 99998642 111111110
Q ss_pred hhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHH
Q 011508 398 RLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSF 466 (484)
Q Consensus 398 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i 466 (484)
...... ..+..++..+.+++.+|++.+|++|||+.++++.|+.+
T Consensus 213 ------~~~~~~-------------------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 213 ------EKGYKM-------------------DAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred ------hcCCCC-------------------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 000000 00123366789999999999999999999999998753
No 146
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4.2e-39 Score=309.83 Aligned_cols=269 Identities=25% Similarity=0.378 Sum_probs=205.0
Q ss_pred cCCCCccCccccccceeEEEEEEcC-----CCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcC-CCCCceeEeeeeeee
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDH-----DDHETLVAVKVLNLQHR-GASKSFIAECQALRSI-RHRNLVKIITSCVSV 230 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 230 (484)
.++|.+.+.||+|+||.||+|+... ......+|+|.++.... .....+.+|+.+++++ +||||++++++|.
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~-- 88 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCT-- 88 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEc--
Confidence 3578889999999999999997531 12346799998875432 2345688999999999 6999999999864
Q ss_pred ccCCCceeeEEeecccCCCHHHHHhhcCC------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCC
Q 011508 231 DFQGNDFEALVYELMVNGSLEEWLHLNRD------------APRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKP 298 (484)
Q Consensus 231 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~ 298 (484)
.+...++||||+++|+|.+++..... ....+++.++..++.|++.||+||| +++++||||||
T Consensus 89 ---~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~gi~H~dlkp 162 (314)
T cd05099 89 ---QEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLE---SRRCIHRDLAA 162 (314)
T ss_pred ---cCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHH---HCCeeeccccc
Confidence 34478999999999999999975431 1235899999999999999999999 89999999999
Q ss_pred CCeeecCCCceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCC
Q 011508 299 SNVLLDGELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPT 377 (484)
Q Consensus 299 ~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~ 377 (484)
+||++++++.+||+|||.++........ .......++..|+|||.+.+..++.++||||||+++|||++ |..||
T Consensus 163 ~Nill~~~~~~kL~Dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~ 237 (314)
T cd05099 163 RNVLVTEDNVMKIADFGLARGVHDIDYY-----KKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPY 237 (314)
T ss_pred eeEEEcCCCcEEEccccccccccccccc-----cccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCC
Confidence 9999999999999999999865432110 00111224567999999988889999999999999999999 88888
Q ss_pred CCCccCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHH
Q 011508 378 NEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNME 457 (484)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ 457 (484)
..... ....... ..... . ..+..++.++.+++.+||+.+|++|||+.
T Consensus 238 ~~~~~-----~~~~~~~--------~~~~~-~-------------------~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 284 (314)
T cd05099 238 PGIPV-----EELFKLL--------REGHR-M-------------------DKPSNCTHELYMLMRECWHAVPTQRPTFK 284 (314)
T ss_pred CCCCH-----HHHHHHH--------HcCCC-C-------------------CCCCCCCHHHHHHHHHHcCCCcccCcCHH
Confidence 64311 1111100 00000 0 00122356788999999999999999999
Q ss_pred HHHHHHHHHHHHHhh
Q 011508 458 EVAAQLLSFRNKLVK 472 (484)
Q Consensus 458 evl~~L~~i~~~~~~ 472 (484)
|+++.|+++......
T Consensus 285 ~ll~~l~~~~~~~~~ 299 (314)
T cd05099 285 QLVEALDKVLAAVSE 299 (314)
T ss_pred HHHHHHHHHHHHhcC
Confidence 999999998776544
No 147
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=2.3e-39 Score=304.58 Aligned_cols=260 Identities=25% Similarity=0.444 Sum_probs=200.5
Q ss_pred CCCCccCccccccceeEEEEEEcCCC-CeeEEEEEEeeccC-ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCc
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDD-HETLVAVKVLNLQH-RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
++|+..+.||+|+||.||+|+..... ....+|+|.++... ....+.+.+|++++++++|+|++++.+++. ..+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~ 79 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVT-----KFK 79 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEc-----cCC
Confidence 46788899999999999999975432 23579999887543 223467889999999999999999999853 445
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCc
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGL 316 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 316 (484)
..++||||+++++|.+++.... ..+++.++..++.|++.|++||| +.+++||||||+||++++++.+||+|||+
T Consensus 80 ~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~ 153 (268)
T cd05063 80 PAMIITEYMENGALDKYLRDHD---GEFSSYQLVGMLRGIAAGMKYLS---DMNYVHRDLAARNILVNSNLECKVSDFGL 153 (268)
T ss_pred CcEEEEEcCCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhhEEEcCCCcEEECCCcc
Confidence 7899999999999999997432 35899999999999999999999 89999999999999999999999999999
Q ss_pred ccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhhc
Q 011508 317 AKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEAL 395 (484)
Q Consensus 317 a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 395 (484)
+......... .........+..|+|||++....++.++|||||||++||+++ |+.||..... .+.....
T Consensus 154 ~~~~~~~~~~----~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~-----~~~~~~i- 223 (268)
T cd05063 154 SRVLEDDPEG----TYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN-----HEVMKAI- 223 (268)
T ss_pred ceeccccccc----ceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH-----HHHHHHH-
Confidence 8766432111 001111223467999999988889999999999999999998 9999864321 1111110
Q ss_pred chhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHH
Q 011508 396 PERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSF 466 (484)
Q Consensus 396 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i 466 (484)
... ... ....+++.++.+++.+|++.+|++||++.+|++.|+++
T Consensus 224 -------~~~-~~~-------------------~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 224 -------NDG-FRL-------------------PAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred -------hcC-CCC-------------------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 000 000 00122356789999999999999999999999999875
No 148
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=4.8e-39 Score=306.96 Aligned_cols=268 Identities=22% Similarity=0.336 Sum_probs=201.5
Q ss_pred cCCCCccCccccccceeEEEEEEcCCC--------------CeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCcee
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDD--------------HETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVK 222 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~--------------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~ 222 (484)
..+|++.+.||+|+||.||+|...... .+..||+|.+..... ...+.+.+|++++++++|||+++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 457899999999999999999865322 235689999875543 23467889999999999999999
Q ss_pred EeeeeeeeccCCCceeeEEeecccCCCHHHHHhhcCC-------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecC
Q 011508 223 IITSCVSVDFQGNDFEALVYELMVNGSLEEWLHLNRD-------APRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCD 295 (484)
Q Consensus 223 ~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~-------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~d 295 (484)
+++++. .+...++||||+++++|.+++..... ....+++..++.++.|++.||+||| +.+++|||
T Consensus 84 ~~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH---~~~i~H~d 155 (296)
T cd05051 84 LLGVCT-----VDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLE---SLNFVHRD 155 (296)
T ss_pred EEEEEe-----cCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHH---HcCccccc
Confidence 999864 33578999999999999999975431 1225899999999999999999999 89999999
Q ss_pred CCCCCeeecCCCceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh--C
Q 011508 296 LKPSNVLLDGELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT--G 373 (484)
Q Consensus 296 lk~~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt--g 373 (484)
|||+||+++.++.++|+|||.+........ ........++..|+|||++.+..++.++|||||||++|||++ |
T Consensus 156 lkp~Nili~~~~~~~l~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~ 230 (296)
T cd05051 156 LATRNCLVGKNYTIKIADFGMSRNLYSSDY-----YRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCR 230 (296)
T ss_pred cchhceeecCCCceEEccccceeecccCcc-----eeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCC
Confidence 999999999999999999999876532211 111123346778999999888889999999999999999998 6
Q ss_pred CCCCCCCccCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCC
Q 011508 374 KGPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRER 453 (484)
Q Consensus 374 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R 453 (484)
..||...... ............. +..... ..+..++.++.+++.+|++.||++|
T Consensus 231 ~~p~~~~~~~--~~~~~~~~~~~~~-----~~~~~~-------------------~~~~~~~~~l~~li~~cl~~~p~~R 284 (296)
T cd05051 231 EQPYEHLTDQ--QVIENAGHFFRDD-----GRQIYL-------------------PRPPNCPKDIYELMLECWRRDEEDR 284 (296)
T ss_pred CCCCCCcChH--HHHHHHHhccccc-----cccccC-------------------CCccCCCHHHHHHHHHHhccChhcC
Confidence 7777543211 0100110000000 000000 0012235679999999999999999
Q ss_pred CCHHHHHHHHH
Q 011508 454 MNMEEVAAQLL 464 (484)
Q Consensus 454 Pt~~evl~~L~ 464 (484)
||+.||++.|+
T Consensus 285 pt~~el~~~L~ 295 (296)
T cd05051 285 PTFREIHLFLQ 295 (296)
T ss_pred CCHHHHHHHhc
Confidence 99999999885
No 149
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=4.2e-39 Score=301.40 Aligned_cols=254 Identities=29% Similarity=0.483 Sum_probs=198.4
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
.++|++.+.||+|+||.||+|... .+..+|+|.++.... ..+.+.+|+.++++++|+|++++++++. ...
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~---~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~------~~~ 74 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWN---GNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS------EEP 74 (260)
T ss_pred hHHhhhhheeccccCceEEEEEec---CCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC------CCC
Confidence 356889999999999999999855 345699999875433 3467899999999999999999998742 235
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
.+++|||+++++|.++++... ...+++..++.++.|++.||+||| +++++||||||+||++++++.++|+|||.+
T Consensus 75 ~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~di~p~Nili~~~~~~~l~dfg~~ 149 (260)
T cd05070 75 IYIVTEYMSKGSLLDFLKDGE--GRALKLPNLVDMAAQVAAGMAYIE---RMNYIHRDLRSANILVGDGLVCKIADFGLA 149 (260)
T ss_pred cEEEEEecCCCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEEeCCceEEeCCceee
Confidence 689999999999999997432 345899999999999999999999 899999999999999999999999999999
Q ss_pred cccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhhcc
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEALP 396 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 396 (484)
........ .......++..|+|||...+..++.++||||||+++|||++ |..||...... ......
T Consensus 150 ~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~--~~~~~~----- 216 (260)
T cd05070 150 RLIEDNEY------TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR--EVLEQV----- 216 (260)
T ss_pred eeccCccc------ccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHH--HHHHHH-----
Confidence 76533211 11112235678999999988889999999999999999999 88998653211 111110
Q ss_pred hhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHH
Q 011508 397 ERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLS 465 (484)
Q Consensus 397 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 465 (484)
....... .+..++..+.+++.+|++.+|++|||+.++.+.|++
T Consensus 217 -------~~~~~~~-------------------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 217 -------ERGYRMP-------------------CPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred -------HcCCCCC-------------------CCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 0000000 011225678999999999999999999999999875
No 150
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.7e-39 Score=310.23 Aligned_cols=265 Identities=25% Similarity=0.377 Sum_probs=203.1
Q ss_pred CCCCccCccccccceeEEEEEEcCCC-----CeeEEEEEEeeccCc-cchHHHHHHHHHHHcC-CCCCceeEeeeeeeec
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDD-----HETLVAVKVLNLQHR-GASKSFIAECQALRSI-RHRNLVKIITSCVSVD 231 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~ 231 (484)
++|.+.+.||+|+||.||+|...... ....+|+|.++.... .....+.+|+++++.+ +|+||++++++|.
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~--- 94 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT--- 94 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEe---
Confidence 57899999999999999999853221 235699999875432 2345688899999999 8999999999864
Q ss_pred cCCCceeeEEeecccCCCHHHHHhhcCC------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCC
Q 011508 232 FQGNDFEALVYELMVNGSLEEWLHLNRD------------APRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPS 299 (484)
Q Consensus 232 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~ 299 (484)
.++..++||||+++|+|.+++..... ....+++.+++.++.|++.||+||| +++++||||||+
T Consensus 95 --~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~gi~H~dlkp~ 169 (307)
T cd05098 95 --QDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLA---SKKCIHRDLAAR 169 (307)
T ss_pred --cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH---HCCcccccccHH
Confidence 33478999999999999999975432 1235889999999999999999999 899999999999
Q ss_pred CeeecCCCceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCC
Q 011508 300 NVLLDGELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTN 378 (484)
Q Consensus 300 NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~ 378 (484)
||+++.++.+||+|||.+......... .......++..|+|||.+.+..++.++|||||||++|||++ |..||.
T Consensus 170 Nill~~~~~~kL~dfg~a~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~ 244 (307)
T cd05098 170 NVLVTEDNVMKIADFGLARDIHHIDYY-----KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP 244 (307)
T ss_pred heEEcCCCcEEECCCcccccccccchh-----hccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCC
Confidence 999999999999999998765322100 01111224568999999988889999999999999999998 888885
Q ss_pred CCccCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHH
Q 011508 379 EMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEE 458 (484)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~e 458 (484)
... ..+.... +...... ..+..+..++.+++.+||+.+|++|||+.|
T Consensus 245 ~~~-----~~~~~~~---------~~~~~~~-------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e 291 (307)
T cd05098 245 GVP-----VEELFKL---------LKEGHRM-------------------DKPSNCTNELYMMMRDCWHAVPSQRPTFKQ 291 (307)
T ss_pred cCC-----HHHHHHH---------HHcCCCC-------------------CCCCcCCHHHHHHHHHHcccChhhCcCHHH
Confidence 421 1111110 0000000 001223567889999999999999999999
Q ss_pred HHHHHHHHHHH
Q 011508 459 VAAQLLSFRNK 469 (484)
Q Consensus 459 vl~~L~~i~~~ 469 (484)
|++.|+++.+.
T Consensus 292 vl~~l~~~~~~ 302 (307)
T cd05098 292 LVEDLDRILAL 302 (307)
T ss_pred HHHHHHHHHHH
Confidence 99999998765
No 151
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=5.9e-39 Score=307.44 Aligned_cols=266 Identities=23% Similarity=0.364 Sum_probs=204.2
Q ss_pred cCCCCccCccccccceeEEEEEEcC-----CCCeeEEEEEEeeccC-ccchHHHHHHHHHHHcC-CCCCceeEeeeeeee
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDH-----DDHETLVAVKVLNLQH-RGASKSFIAECQALRSI-RHRNLVKIITSCVSV 230 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 230 (484)
.++|.+.+.||+|+||.||+|+... ...+..||+|.+.... ......+.+|+.+++.+ +||||+++++++.
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~-- 91 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT-- 91 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEe--
Confidence 4568889999999999999997531 2234579999886443 23346788999999999 8999999999854
Q ss_pred ccCCCceeeEEeecccCCCHHHHHhhcCC------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCC
Q 011508 231 DFQGNDFEALVYELMVNGSLEEWLHLNRD------------APRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKP 298 (484)
Q Consensus 231 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~ 298 (484)
.....++||||+++|+|.+++..... ....+++.+++.++.|++.||+||| +++++||||||
T Consensus 92 ---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~givH~dlkp 165 (304)
T cd05101 92 ---QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLA---SQKCIHRDLAA 165 (304)
T ss_pred ---cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHH---HCCeeeccccc
Confidence 34578999999999999999975432 1235788999999999999999999 89999999999
Q ss_pred CCeeecCCCceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCC
Q 011508 299 SNVLLDGELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPT 377 (484)
Q Consensus 299 ~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~ 377 (484)
+||++++++.+||+|||.++........ .......++..|+|||++.+..++.++||||||+++|||++ |..||
T Consensus 166 ~Nili~~~~~~kl~D~g~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~ 240 (304)
T cd05101 166 RNVLVTENNVMKIADFGLARDVNNIDYY-----KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 240 (304)
T ss_pred ceEEEcCCCcEEECCCccceeccccccc-----ccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCc
Confidence 9999999999999999999866432211 11112335678999999988889999999999999999998 78887
Q ss_pred CCCccCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHH
Q 011508 378 NEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNME 457 (484)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ 457 (484)
.... ..+........ ... ..+..++..+.+++.+||+.+|++|||+.
T Consensus 241 ~~~~-----~~~~~~~~~~~---------~~~-------------------~~~~~~~~~~~~li~~cl~~~p~~Rps~~ 287 (304)
T cd05101 241 PGIP-----VEELFKLLKEG---------HRM-------------------DKPANCTNELYMMMRDCWHAIPSHRPTFK 287 (304)
T ss_pred ccCC-----HHHHHHHHHcC---------CcC-------------------CCCCCCCHHHHHHHHHHcccChhhCCCHH
Confidence 5431 11111110000 000 00123466789999999999999999999
Q ss_pred HHHHHHHHHHHH
Q 011508 458 EVAAQLLSFRNK 469 (484)
Q Consensus 458 evl~~L~~i~~~ 469 (484)
||++.|+++..-
T Consensus 288 e~l~~l~~~~~~ 299 (304)
T cd05101 288 QLVEDLDRILTL 299 (304)
T ss_pred HHHHHHHHHHHh
Confidence 999999887543
No 152
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=1e-39 Score=316.92 Aligned_cols=197 Identities=30% Similarity=0.446 Sum_probs=169.4
Q ss_pred CCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCC-C-----CCceeEeeeeeeeccC
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIR-H-----RNLVKIITSCVSVDFQ 233 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h-----~niv~~~~~~~~~~~~ 233 (484)
+|.+.+.||+|+||.|.+|. +..+++.||||+++... ....+...|+.+|..|+ | -|+|++++++ .
T Consensus 187 rY~V~e~LGkGtFGQVvk~~--d~~T~e~VAIKIiKN~k-~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F-----~ 258 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAY--DHKTGEIVAIKIIKNKK-RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYF-----Y 258 (586)
T ss_pred EEEEEEEecccccceeEEEE--ecCCCcEEEEEeeccCh-HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecc-----c
Confidence 78999999999999999999 55678999999998653 34466778999999996 4 3799999995 4
Q ss_pred CCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCC--CceEE
Q 011508 234 GNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGE--LTAHV 311 (484)
Q Consensus 234 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~--~~~kl 311 (484)
..++.|||+|.+ ..+|.++++.+.. ..++...+..++.||+.||.+|| ..+|||+||||+||||.+. ..+||
T Consensus 259 fr~HlciVfELL-~~NLYellK~n~f--~Glsl~~ir~~~~Qil~~L~~L~---~l~IIHcDLKPENILL~~~~r~~vKV 332 (586)
T KOG0667|consen 259 FRNHLCIVFELL-STNLYELLKNNKF--RGLSLPLVRKFAQQILTALLFLH---ELGIIHCDLKPENILLKDPKRSRIKV 332 (586)
T ss_pred cccceeeeehhh-hhhHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCChhheeeccCCcCceeE
Confidence 455999999999 6799999997654 35899999999999999999999 9999999999999999643 38999
Q ss_pred cccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCC
Q 011508 312 SDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEM 380 (484)
Q Consensus 312 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~ 380 (484)
+|||.|....... .....+..|+|||++.+.+|+.+.||||||||+.||++|.+.|.+.
T Consensus 333 IDFGSSc~~~q~v----------ytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ 391 (586)
T KOG0667|consen 333 IDFGSSCFESQRV----------YTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGD 391 (586)
T ss_pred EecccccccCCcc----------eeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCC
Confidence 9999998753221 2456788999999999999999999999999999999998888764
No 153
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=4.7e-39 Score=304.23 Aligned_cols=251 Identities=26% Similarity=0.350 Sum_probs=194.1
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
++|++.+.||+|+||.||+|+. ..++..||+|.+..... .....+.+|++++++++||||+++++++.. ...
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~--~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~ 73 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYH--LLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFV-----ENR 73 (279)
T ss_pred CcchheeeeccCCCeEEEEEEE--cCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEE-----CCE
Confidence 3578889999999999999984 34578899999875432 234578899999999999999999998654 347
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
.++||||+++++|..+. .+++..+..++.|++.||+||| +.+|+|+||||+||+++.++.++|+|||++
T Consensus 74 ~~lv~e~~~~~~l~~~~--------~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nill~~~~~~~l~dfg~~ 142 (279)
T cd06619 74 ISICTEFMDGGSLDVYR--------KIPEHVLGRIAVAVVKGLTYLW---SLKILHRDVKPSNMLVNTRGQVKLCDFGVS 142 (279)
T ss_pred EEEEEecCCCCChHHhh--------cCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCCHHHEEECCCCCEEEeeCCcc
Confidence 78999999999997653 2678889999999999999999 899999999999999999999999999998
Q ss_pred cccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcch
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPE 397 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 397 (484)
...... ......++..|+|||++.+..++.++||||||+++|+|++|+.||........... +.
T Consensus 143 ~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~-------~~ 206 (279)
T cd06619 143 TQLVNS---------IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLM-------PL 206 (279)
T ss_pred eecccc---------cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccc-------hH
Confidence 765321 11224688999999999988899999999999999999999999975332211100 00
Q ss_pred h-hhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 398 R-LAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 398 ~-~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
. ...+.+..... ........++.+++.+|++.+|++||+++|+++.
T Consensus 207 ~~~~~~~~~~~~~-------------------~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 207 QLLQCIVDEDPPV-------------------LPVGQFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred HHHHHHhccCCCC-------------------CCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 0 00000000000 0001114568899999999999999999999865
No 154
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=4.1e-39 Score=304.70 Aligned_cols=262 Identities=24% Similarity=0.398 Sum_probs=201.8
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCC--eeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCC
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDH--ETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQG 234 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~--~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 234 (484)
..+|++.+.||+|+||+||+|++...+. ...||+|+++.... .....+.+|+.++..++|+||++++++|..
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~----- 80 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT----- 80 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-----
Confidence 3568889999999999999998654332 23589999875433 234678899999999999999999998742
Q ss_pred CceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEccc
Q 011508 235 NDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDF 314 (484)
Q Consensus 235 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 314 (484)
...++++||+++|+|.+++... ...+++..++.++.|++.||+||| +++|+||||||+||++++++.+||+||
T Consensus 81 -~~~~l~~~~~~~g~l~~~l~~~---~~~~~~~~~~~~~~qi~~~L~~lH---~~~iiH~dlkp~Nil~~~~~~~kL~df 153 (279)
T cd05109 81 -STVQLVTQLMPYGCLLDYVREN---KDRIGSQDLLNWCVQIAKGMSYLE---EVRLVHRDLAARNVLVKSPNHVKITDF 153 (279)
T ss_pred -CCcEEEEEcCCCCCHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccccceEEEcCCCcEEECCC
Confidence 2467999999999999999743 235899999999999999999999 899999999999999999999999999
Q ss_pred CcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHh
Q 011508 315 GLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKE 393 (484)
Q Consensus 315 g~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~ 393 (484)
|+++........ .......++..|+|||...+..++.++|||||||++|||++ |..||...... .+..++..
T Consensus 154 G~~~~~~~~~~~-----~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~~~~ 226 (279)
T cd05109 154 GLARLLDIDETE-----YHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAR--EIPDLLEK 226 (279)
T ss_pred Cceeecccccce-----eecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHHC
Confidence 999876432211 01111235678999999988889999999999999999998 89998653211 11111110
Q ss_pred hcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHHH
Q 011508 394 ALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRNK 469 (484)
Q Consensus 394 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~ 469 (484)
. ... ..+..++..+.+++..||+.||++||++.|+++.|+++...
T Consensus 227 ~------------~~~-------------------~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05109 227 G------------ERL-------------------PQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARD 271 (279)
T ss_pred C------------CcC-------------------CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcC
Confidence 0 000 00112356788999999999999999999999998877544
No 155
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=5.7e-39 Score=299.96 Aligned_cols=252 Identities=29% Similarity=0.436 Sum_probs=197.0
Q ss_pred CccccccceeEEEEEEcCCC-CeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCceeeEEe
Q 011508 165 NLIGAGSFGSVYKGIFDHDD-HETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFEALVY 242 (484)
Q Consensus 165 ~~lg~G~~g~Vy~~~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 242 (484)
+.||+|+||.||+|++.... ....+|+|.+..... ...+.+.+|+++++.++|+|++++++++. ....++||
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------~~~~~~v~ 74 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK------GEPLMLVM 74 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc------CCceEEEE
Confidence 47999999999999865443 447899999875543 23467889999999999999999998752 23568999
Q ss_pred ecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccccccc
Q 011508 243 ELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFLPE 322 (484)
Q Consensus 243 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~~~ 322 (484)
||+++++|.+++.... .+++..++.++.|++.||+||| ..+++|+||||+||+++.++.+||+|||.++....
T Consensus 75 e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lh---~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~ 147 (257)
T cd05060 75 ELAPLGPLLKYLKKRR----EIPVSDLKELAHQVAMGMAYLE---SKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGA 147 (257)
T ss_pred EeCCCCcHHHHHHhCC----CCCHHHHHHHHHHHHHHHHHHh---hcCeeccCcccceEEEcCCCcEEeccccccceeec
Confidence 9999999999997432 5899999999999999999999 89999999999999999999999999999986643
Q ss_pred ccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhhcchhhhh
Q 011508 323 AANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEALPERLAE 401 (484)
Q Consensus 323 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (484)
..... .......++..|+|||...+..++.++||||||+++||+++ |+.||..... ..+...+....+
T Consensus 148 ~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~--~~~~~~~~~~~~----- 216 (257)
T cd05060 148 GSDYY----RATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG--AEVIAMLESGER----- 216 (257)
T ss_pred CCccc----ccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH--HHHHHHHHcCCc-----
Confidence 22111 11111224568999999988899999999999999999998 9999865321 111111111000
Q ss_pred hcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHH
Q 011508 402 IVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSF 466 (484)
Q Consensus 402 ~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i 466 (484)
. ..+..++..+.+++.+||+.+|++||++.++++.|+++
T Consensus 217 -----~---------------------~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 255 (257)
T cd05060 217 -----L---------------------PRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRD 255 (257)
T ss_pred -----C---------------------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence 0 00222356789999999999999999999999999876
No 156
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-41 Score=288.95 Aligned_cols=253 Identities=24% Similarity=0.343 Sum_probs=200.6
Q ss_pred hcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC--ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCC
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH--RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQG 234 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 234 (484)
.++.|++.+.||+|.|+.||+.. +..+++.+|+|+++... ....+.+.+|+++.+.|+||||+++... +..
T Consensus 9 f~d~y~l~e~igkG~FSvVrRc~--~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~t-----i~~ 81 (355)
T KOG0033|consen 9 FSDNYDVKEELGKGAFSVVRRCV--HKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS-----IQE 81 (355)
T ss_pred cchhhhHHHHHccCchHHHHHHH--hccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhh-----hcc
Confidence 45678889999999999999988 66678889999886432 2355788999999999999999999987 556
Q ss_pred CceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecC---CCceEE
Q 011508 235 NDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDG---ELTAHV 311 (484)
Q Consensus 235 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~---~~~~kl 311 (484)
..+.++|+|+|.|++|..-+-.. ...++..+-...+||+.+|.|+| .++|||||+||+|+++.. .-.+||
T Consensus 82 ~~~~ylvFe~m~G~dl~~eIV~R----~~ySEa~aSH~~rQiLeal~yCH---~n~IvHRDvkP~nllLASK~~~A~vKL 154 (355)
T KOG0033|consen 82 ESFHYLVFDLVTGGELFEDIVAR----EFYSEADASHCIQQILEALAYCH---SNGIVHRDLKPENLLLASKAKGAAVKL 154 (355)
T ss_pred cceeEEEEecccchHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHH---hcCceeccCChhheeeeeccCCCceee
Confidence 66899999999999997655422 23678888889999999999999 999999999999999943 347999
Q ss_pred cccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHH
Q 011508 312 SDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFV 391 (484)
Q Consensus 312 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 391 (484)
+|||+|..+. ......+..||++|+|||++...+|+..+|||+.||+||-|+.|.+||.+.... .+ .
T Consensus 155 ~~FGvAi~l~--------~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~--rl---y 221 (355)
T KOG0033|consen 155 ADFGLAIEVN--------DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH--RL---Y 221 (355)
T ss_pred cccceEEEeC--------CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHH--HH---H
Confidence 9999998764 244556788999999999999999999999999999999999999999763221 11 1
Q ss_pred HhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 392 KEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 392 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
.... ...+| .+.. .+....++..+|+++||..||.+|.|+.|.+.
T Consensus 222 e~I~----~g~yd----~~~~-----------------~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 222 EQIK----AGAYD----YPSP-----------------EWDTVTPEAKSLIRRMLTVNPKKRITADEALK 266 (355)
T ss_pred HHHh----ccccC----CCCc-----------------ccCcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence 1100 00011 0000 02223556789999999999999999999874
No 157
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=1.1e-38 Score=300.20 Aligned_cols=258 Identities=25% Similarity=0.343 Sum_probs=190.5
Q ss_pred CccccccceeEEEEEEcCCCCeeEEEEEEeeccCcc-chHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCceeeEEee
Q 011508 165 NLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRG-ASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFEALVYE 243 (484)
Q Consensus 165 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 243 (484)
+.||+|+||.||+|.+.++.+...+|+|.++..... ....+.+|+.++++++||||+++++++. .....++|||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~~lv~e 75 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCT-----EVTPYLLVME 75 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEc-----CCCCcEEEEE
Confidence 368999999999998766666778999988755432 3357889999999999999999999854 3346899999
Q ss_pred cccCCCHHHHHhhcCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccccccc
Q 011508 244 LMVNGSLEEWLHLNRD-APRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFLPE 322 (484)
Q Consensus 244 ~~~~gsL~~~l~~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~~~ 322 (484)
|+++|+|.+++..... .....++..+..++.|++.|++||| +.+++|+||||+||+++.++.+||+|||.+.....
T Consensus 76 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~ 152 (269)
T cd05087 76 FCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLH---KNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYK 152 (269)
T ss_pred CCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHH---HCCEeccccCcceEEEcCCCcEEECCccccccccC
Confidence 9999999999975432 2234677888899999999999999 89999999999999999999999999999875422
Q ss_pred ccccCCCCccccccccccccccCccccCCC-------CCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhh
Q 011508 323 AANNLSSNQSSSVGVKGTVGYAAPEYGMGS-------EVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEA 394 (484)
Q Consensus 323 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-------~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~ 394 (484)
... ........++..|+|||++... .++.++||||||+++|||++ |+.||........ .. . .
T Consensus 153 ~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~-~~-~---~ 222 (269)
T cd05087 153 EDY-----YVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQV-LT-Y---T 222 (269)
T ss_pred cce-----eecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHH-HH-H---H
Confidence 110 0111224567889999987542 35789999999999999996 9999965322110 00 0 0
Q ss_pred cchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHH
Q 011508 395 LPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLL 464 (484)
Q Consensus 395 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 464 (484)
.........++.+. ..+...+.+++..|+ .+|++|||++||+..|+
T Consensus 223 ~~~~~~~~~~~~~~-----------------------~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 223 VREQQLKLPKPRLK-----------------------LPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred hhcccCCCCCCccC-----------------------CCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 00000111111110 011445778999998 58999999999998774
No 158
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=4.4e-39 Score=307.75 Aligned_cols=261 Identities=24% Similarity=0.375 Sum_probs=201.3
Q ss_pred CCCCccCccccccceeEEEEEEc---CCCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcC-CCCCceeEeeeeeeeccC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFD---HDDHETLVAVKVLNLQHR-GASKSFIAECQALRSI-RHRNLVKIITSCVSVDFQ 233 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~---~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 233 (484)
++|.+.+.||+|+||.||+|... .......||+|.++.... ...+.+.+|+.+++++ +|+||+++++++..
T Consensus 35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~---- 110 (302)
T cd05055 35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTI---- 110 (302)
T ss_pred HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEec----
Confidence 46888999999999999999752 233456899998875432 2345788999999999 79999999998643
Q ss_pred CCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcc
Q 011508 234 GNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSD 313 (484)
Q Consensus 234 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~D 313 (484)
.+..++||||+++|+|.++++... ...+++.+++.++.|++.||+||| +++|+|+||||+||+++.++.++|+|
T Consensus 111 -~~~~~lv~e~~~~~~L~~~i~~~~--~~~l~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~l~d 184 (302)
T cd05055 111 -GGPILVITEYCCYGDLLNFLRRKR--ESFLTLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNVLLTHGKIVKICD 184 (302)
T ss_pred -CCceEEEEEcCCCCcHHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHH---HCCeehhhhccceEEEcCCCeEEECC
Confidence 347899999999999999997433 233899999999999999999999 89999999999999999999999999
Q ss_pred cCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHH
Q 011508 314 FGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVK 392 (484)
Q Consensus 314 fg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~ 392 (484)
||.++........ .......++..|+|||.+.+..++.++||||+||++|||++ |..||....... .+..
T Consensus 185 fg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~-~~~~--- 255 (302)
T cd05055 185 FGLARDIMNDSNY-----VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDS-KFYK--- 255 (302)
T ss_pred CcccccccCCCce-----eecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchH-HHHH---
Confidence 9998865332110 01112345778999999988889999999999999999998 999986532211 0111
Q ss_pred hhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHH
Q 011508 393 EALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSF 466 (484)
Q Consensus 393 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i 466 (484)
.++....... +...+.++.+++.+|++.+|++|||+.|+++.|+++
T Consensus 256 ---------~~~~~~~~~~-------------------~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 256 ---------LIKEGYRMAQ-------------------PEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred ---------HHHcCCcCCC-------------------CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 1110000000 011145689999999999999999999999999864
No 159
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=3.2e-39 Score=303.96 Aligned_cols=260 Identities=24% Similarity=0.396 Sum_probs=203.0
Q ss_pred CCCCccCccccccceeEEEEEEcCC-CCeeEEEEEEeeccC-ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCc
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHD-DHETLVAVKVLNLQH-RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
++|.+.+.||+|+||.||+|...+. .....||+|...... ....+.+.+|+.++++++|+||+++++++.. .
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~------~ 79 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE------N 79 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC------C
Confidence 4578889999999999999986543 334579999887554 2344678999999999999999999998532 3
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCc
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGL 316 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 316 (484)
..++||||+++++|.+++.... ..+++..++.++.|++.||+||| +.+++||||||+||+++.++.+||+|||+
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~l~~~l~~lH---~~~~~H~dl~p~nili~~~~~~~l~d~g~ 153 (270)
T cd05056 80 PVWIVMELAPLGELRSYLQVNK---YSLDLASLILYSYQLSTALAYLE---SKRFVHRDIAARNVLVSSPDCVKLGDFGL 153 (270)
T ss_pred CcEEEEEcCCCCcHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccChheEEEecCCCeEEccCce
Confidence 4689999999999999997432 35899999999999999999999 89999999999999999999999999999
Q ss_pred ccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhhc
Q 011508 317 AKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEAL 395 (484)
Q Consensus 317 a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 395 (484)
++....... .......++..|+|||.+....++.++||||||+++||+++ |..||....... .......
T Consensus 154 ~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~--~~~~~~~-- 223 (270)
T cd05056 154 SRYLEDESY------YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNND--VIGRIEN-- 223 (270)
T ss_pred eeecccccc------eecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHH--HHHHHHc--
Confidence 876543211 00112234568999999888889999999999999999986 999996542211 0000000
Q ss_pred chhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHHH
Q 011508 396 PERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRNK 469 (484)
Q Consensus 396 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~ 469 (484)
- ... ..+..++.++.+++.+|+..+|++|||+.++++.|++++.+
T Consensus 224 ------~--~~~---------------------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 224 ------G--ERL---------------------PMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred ------C--CcC---------------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 0 000 00223466789999999999999999999999999998754
No 160
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=4.1e-39 Score=305.36 Aligned_cols=260 Identities=23% Similarity=0.371 Sum_probs=199.8
Q ss_pred CCCccCccccccceeEEEEEEcCC---CCeeEEEEEEeeccCcc-chHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHD---DHETLVAVKVLNLQHRG-ASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~---~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
+|.+.+.||+|+||.||+|..... ..+..||+|+++..... ..+.+.+|+.++..++||||+++++++. ..
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~-----~~ 80 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVT-----KE 80 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-----CC
Confidence 467788999999999999986432 24578999999755432 2356889999999999999999999853 33
Q ss_pred ceeeEEeecccCCCHHHHHhhcC------------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeee
Q 011508 236 DFEALVYELMVNGSLEEWLHLNR------------DAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLL 303 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~------------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll 303 (484)
...++++||+++++|.+++.... .....+++..++.++.|++.||+||| +++|+||||||+||++
T Consensus 81 ~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH---~~gi~H~dlkp~Nil~ 157 (283)
T cd05091 81 QPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLS---SHHVVHKDLATRNVLV 157 (283)
T ss_pred CceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---HcCccccccchhheEe
Confidence 47899999999999999985321 11235888999999999999999999 8999999999999999
Q ss_pred cCCCceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCcc
Q 011508 304 DGELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFT 382 (484)
Q Consensus 304 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~ 382 (484)
++++.+||+|||+++....... ........+++.|+|||.+.+..++.++|||||||++|||++ |..||.....
T Consensus 158 ~~~~~~kl~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~ 232 (283)
T cd05091 158 FDKLNVKISDLGLFREVYAADY-----YKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN 232 (283)
T ss_pred cCCCceEecccccccccccchh-----eeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH
Confidence 9999999999999886533211 111122345778999999988889999999999999999998 8888865311
Q ss_pred CCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 383 GNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
.++... +.+.... ..+.+|+..+.+++..||+.+|++||+++||++.
T Consensus 233 -----~~~~~~--------i~~~~~~--------------------~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~ 279 (283)
T cd05091 233 -----QDVIEM--------IRNRQVL--------------------PCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSR 279 (283)
T ss_pred -----HHHHHH--------HHcCCcC--------------------CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence 111111 1111000 0023346778999999999999999999999999
Q ss_pred HHH
Q 011508 463 LLS 465 (484)
Q Consensus 463 L~~ 465 (484)
|+.
T Consensus 280 l~~ 282 (283)
T cd05091 280 LRT 282 (283)
T ss_pred hhC
Confidence 864
No 161
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=3.5e-39 Score=303.45 Aligned_cols=261 Identities=26% Similarity=0.453 Sum_probs=200.5
Q ss_pred CCCccCccccccceeEEEEEEcCCC-CeeEEEEEEeeccC-ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHDD-HETLVAVKVLNLQH-RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
.|++.+.||+|+||.||+|.....+ ....||+|.++... ......+..|+.+++.++||||+++++++ ..+..
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~-----~~~~~ 79 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVV-----TKSRP 79 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEE-----CCCCc
Confidence 4778899999999999999975433 24579999987543 23346799999999999999999999985 44557
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
.++||||+++++|.+++... ...+++.+++.++.|++.||+||| +++++|+||||+||+++.++.+||+|||.+
T Consensus 80 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~~l~~al~~lH---~~g~~H~dl~p~nili~~~~~~kl~dfg~~ 153 (269)
T cd05065 80 VMIITEFMENGALDSFLRQN---DGQFTVIQLVGMLRGIAAGMKYLS---EMNYVHRDLAARNILVNSNLVCKVSDFGLS 153 (269)
T ss_pred eEEEEecCCCCcHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccChheEEEcCCCcEEECCCccc
Confidence 89999999999999998743 235899999999999999999999 899999999999999999999999999998
Q ss_pred cccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhhcc
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEALP 396 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 396 (484)
........... .........+..|+|||.+.+..++.++|||||||++||+++ |..||...... .....+...
T Consensus 154 ~~~~~~~~~~~--~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~--~~~~~i~~~-- 227 (269)
T cd05065 154 RFLEDDTSDPT--YTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ--DVINAIEQD-- 227 (269)
T ss_pred cccccCccccc--cccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH--HHHHHHHcC--
Confidence 76543221100 000111112457999999998899999999999999999887 99998653211 111111100
Q ss_pred hhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHH
Q 011508 397 ERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSF 466 (484)
Q Consensus 397 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i 466 (484)
. .+. .+.+++..+.+++..||+.+|++||++++|++.|+.+
T Consensus 228 ------~--~~~---------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 228 ------Y--RLP---------------------PPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred ------C--cCC---------------------CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 0 000 0223456788999999999999999999999998764
No 162
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=5.5e-39 Score=306.28 Aligned_cols=267 Identities=24% Similarity=0.359 Sum_probs=197.6
Q ss_pred CCCCccCccccccceeEEEEEEcCC------------CCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEee
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHD------------DHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIIT 225 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~------------~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~ 225 (484)
++|++.+.||+|+||.||+++.... .....||+|.++.... .....+.+|++++++++|+|++++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 5789999999999999999875321 1234689999875432 23356889999999999999999999
Q ss_pred eeeeeccCCCceeeEEeecccCCCHHHHHhhcCC--------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCC
Q 011508 226 SCVSVDFQGNDFEALVYELMVNGSLEEWLHLNRD--------APRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLK 297 (484)
Q Consensus 226 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~--------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk 297 (484)
++. .....++||||+++++|.+++..... ....+++..++.++.|++.||+||| +.+++|||||
T Consensus 85 ~~~-----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlk 156 (295)
T cd05097 85 VCV-----SDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLA---SLNFVHRDLA 156 (295)
T ss_pred EEc-----CCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHH---hcCeeccccC
Confidence 864 34578999999999999999864321 1124788999999999999999999 8999999999
Q ss_pred CCCeeecCCCceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh--CCC
Q 011508 298 PSNVLLDGELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT--GKG 375 (484)
Q Consensus 298 ~~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt--g~~ 375 (484)
|+||++++++.+||+|||++........ ........++..|+|||......++.++|||||||++|+|++ |..
T Consensus 157 p~Nill~~~~~~kl~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~ 231 (295)
T cd05097 157 TRNCLVGNHYTIKIADFGMSRNLYSGDY-----YRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQ 231 (295)
T ss_pred hhhEEEcCCCcEEecccccccccccCcc-----eeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCC
Confidence 9999999999999999999876532210 111112335678999999988889999999999999999998 566
Q ss_pred CCCCCccCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCC
Q 011508 376 PTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMN 455 (484)
Q Consensus 376 p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt 455 (484)
||...... ............. ....... .+..++..+.+++.+|++.||++|||
T Consensus 232 p~~~~~~~--~~~~~~~~~~~~~-----~~~~~~~-------------------~~~~~~~~l~~li~~~l~~~p~~RPs 285 (295)
T cd05097 232 PYSLLSDE--QVIENTGEFFRNQ-----GRQIYLS-------------------QTPLCPSPVFKLMMRCWSRDIKDRPT 285 (295)
T ss_pred CCcccChH--HHHHHHHHhhhhc-----cccccCC-------------------CCCCCCHHHHHHHHHHcCCCchhCcC
Confidence 77543211 1111000000000 0000000 01112567999999999999999999
Q ss_pred HHHHHHHHH
Q 011508 456 MEEVAAQLL 464 (484)
Q Consensus 456 ~~evl~~L~ 464 (484)
+.+|++.|+
T Consensus 286 ~~~i~~~l~ 294 (295)
T cd05097 286 FNKIHHFLR 294 (295)
T ss_pred HHHHHHHHh
Confidence 999999886
No 163
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=4.1e-39 Score=303.55 Aligned_cols=259 Identities=24% Similarity=0.339 Sum_probs=199.9
Q ss_pred HhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcC-CCCCceeEeeeeeeeccCC
Q 011508 156 KATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSI-RHRNLVKIITSCVSVDFQG 234 (484)
Q Consensus 156 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 234 (484)
.+++.|++.+.||+|+||.||+|... .+++.||+|++.... .....+.+|+.++.++ +|+|++++++++.......
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~--~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~ 79 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHV--KTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPG 79 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEc--CCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCC
Confidence 45678899999999999999999854 457889999987553 3346788999999998 7999999999976543221
Q ss_pred -CceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcc
Q 011508 235 -NDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSD 313 (484)
Q Consensus 235 -~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~D 313 (484)
....++||||+++++|.+++.... ...+++..+..++.|++.|++||| +++|+|+||||+||++++++.++|+|
T Consensus 80 ~~~~~~iv~e~~~~~~L~~~l~~~~--~~~l~~~~~~~~~~qi~~~l~~LH---~~~ivh~dl~~~nili~~~~~~~l~D 154 (272)
T cd06637 80 MDDQLWLVMEFCGAGSVTDLIKNTK--GNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVD 154 (272)
T ss_pred CCcEEEEEEEcCCCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHEEECCCCCEEEcc
Confidence 346889999999999999987532 245889999999999999999999 89999999999999999999999999
Q ss_pred cCcccccccccccCCCCccccccccccccccCccccC-----CCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHh
Q 011508 314 FGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGM-----GSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLH 388 (484)
Q Consensus 314 fg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~ 388 (484)
||++....... .......|+..|+|||++. ...++.++|||||||++|||++|+.||...... .
T Consensus 155 fg~~~~~~~~~-------~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~----~ 223 (272)
T cd06637 155 FGVSAQLDRTV-------GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM----R 223 (272)
T ss_pred CCCceeccccc-------ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHH----H
Confidence 99987653221 1122345889999999875 345788999999999999999999998643211 0
Q ss_pred HHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 389 NFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 389 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
.... ......+.. ....++.++.+++.+||+.+|.+|||+.|+++
T Consensus 224 ~~~~------~~~~~~~~~----------------------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 224 ALFL------IPRNPAPRL----------------------KSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred HHHH------HhcCCCCCC----------------------CCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 0000 000000000 01123557889999999999999999999975
No 164
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=2e-39 Score=313.07 Aligned_cols=242 Identities=24% Similarity=0.294 Sum_probs=188.2
Q ss_pred CCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcC-CCCCceeEeeeeeeeccCCC
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSI-RHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~ 235 (484)
+|.+.+.||+|+||.||+|+. ..++..||+|+++... ......+..|..++..+ +|++|+++++++ ...
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~--~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~-----~~~ 73 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAER--KGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCF-----QTM 73 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEE--CCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEE-----ecC
Confidence 478889999999999999984 4457889999987542 22234567788888777 578888888874 344
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
+..++||||+++|+|.+++... ..+++..+..++.|++.||+||| +++|+||||||+|||++.++.+||+|||
T Consensus 74 ~~~~lv~E~~~~g~L~~~~~~~----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~kL~DfG 146 (323)
T cd05616 74 DRLYFVMEYVNGGDLMYQIQQV----GRFKEPHAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIADFG 146 (323)
T ss_pred CEEEEEEcCCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCEEecCCCHHHeEECCCCcEEEccCC
Confidence 5889999999999999998643 34889999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhc
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEAL 395 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 395 (484)
+++...... .......||+.|+|||++.+..++.++|||||||++|||+||+.||...... ....
T Consensus 147 ~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~-----~~~~--- 211 (323)
T cd05616 147 MCKENMWDG-------VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED-----ELFQ--- 211 (323)
T ss_pred CceecCCCC-------CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHH-----HHHH---
Confidence 987532111 1122346899999999999999999999999999999999999999753211 1111
Q ss_pred chhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCH
Q 011508 396 PERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNM 456 (484)
Q Consensus 396 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~ 456 (484)
.+....... +.....++.+++.+|++.||++|++.
T Consensus 212 -----~i~~~~~~~---------------------p~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 212 -----SIMEHNVAY---------------------PKSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred -----HHHhCCCCC---------------------CCcCCHHHHHHHHHHcccCHHhcCCC
Confidence 111100000 11124567899999999999999985
No 165
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=1.4e-39 Score=320.92 Aligned_cols=208 Identities=25% Similarity=0.307 Sum_probs=170.1
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
.+|++.+.||+|+||.||+|+.. .+++.||+|++.... ......+.+|++++++++|+||+++++.+ .++
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~--~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~-----~~~ 73 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKV--DTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSF-----QDK 73 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEEC--CCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEE-----EcC
Confidence 36889999999999999999844 457899999986432 22345678999999999999999999884 445
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
+..++||||+++|+|.+++... ..+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||
T Consensus 74 ~~~~lv~E~~~~g~L~~~i~~~----~~~~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nill~~~~~ikL~DFG 146 (376)
T cd05598 74 DNLYFVMDYIPGGDMMSLLIRL----GIFEEDLARFYIAELTCAIESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFG 146 (376)
T ss_pred CEEEEEEeCCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHEEECCCCCEEEEeCC
Confidence 6899999999999999999743 34788889999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccC------------------------------------CCCccccccccccccccCccccCCCCCCcccc
Q 011508 316 LAKFLPEAANNL------------------------------------SSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGD 359 (484)
Q Consensus 316 ~a~~~~~~~~~~------------------------------------~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~D 359 (484)
++..+....... ...........||+.|+|||++.+..++.++|
T Consensus 147 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D 226 (376)
T cd05598 147 LCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCD 226 (376)
T ss_pred CCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCccee
Confidence 975432100000 00000012346999999999999999999999
Q ss_pred eehhhHHHHHHHhCCCCCCCC
Q 011508 360 VYSFGILLLEMFTGKGPTNEM 380 (484)
Q Consensus 360 vws~Gvvl~elltg~~p~~~~ 380 (484)
||||||++|||++|+.||...
T Consensus 227 iwSlGvilyell~G~~Pf~~~ 247 (376)
T cd05598 227 WWSVGVILYEMLVGQPPFLAD 247 (376)
T ss_pred eeeccceeeehhhCCCCCCCC
Confidence 999999999999999999753
No 166
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=6.4e-39 Score=301.34 Aligned_cols=260 Identities=26% Similarity=0.437 Sum_probs=201.1
Q ss_pred CCCCccCccccccceeEEEEEEcCCC-CeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCc
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDD-HETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
.+|.+.+.||+|+||.||+|+....+ ....+|+|.++.... ...+.+.+|+.++++++||||+++++++. .++
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~ 78 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVT-----KSK 78 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEe-----cCC
Confidence 46888999999999999999864332 345799998865432 23457889999999999999999999853 445
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCc
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGL 316 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 316 (484)
..++||||+++++|.+++.... ..+++.+++.++.|++.||+||| +.+++||||||+||+++.++.++|+|||.
T Consensus 79 ~~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH---~~~i~h~dlkp~nili~~~~~~~l~dfg~ 152 (267)
T cd05066 79 PVMIVTEYMENGSLDAFLRKHD---GQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILVNSNLVCKVSDFGL 152 (267)
T ss_pred ccEEEEEcCCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---HCCEeehhhchhcEEECCCCeEEeCCCCc
Confidence 7899999999999999997432 35899999999999999999999 89999999999999999999999999999
Q ss_pred ccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhhc
Q 011508 317 AKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEAL 395 (484)
Q Consensus 317 a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 395 (484)
+......... ........++..|+|||.+.+..++.++||||||+++||+++ |+.||...... .....+...
T Consensus 153 ~~~~~~~~~~----~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~--~~~~~~~~~- 225 (267)
T cd05066 153 SRVLEDDPEA----AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ--DVIKAIEEG- 225 (267)
T ss_pred ccccccccce----eeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHH--HHHHHHhCC-
Confidence 9876432211 011111223568999999998889999999999999999887 99998653211 111111100
Q ss_pred chhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHH
Q 011508 396 PERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSF 466 (484)
Q Consensus 396 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i 466 (484)
.. ... ...++..+.+++.+|++.+|++||++.++++.|+++
T Consensus 226 -------~~--~~~---------------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 226 -------YR--LPA---------------------PMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred -------Cc--CCC---------------------CCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 00 000 112255788999999999999999999999999875
No 167
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=2.4e-39 Score=311.73 Aligned_cols=243 Identities=24% Similarity=0.313 Sum_probs=190.1
Q ss_pred CccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcC-CCCCceeEeeeeeeeccCCCceeeE
Q 011508 165 NLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSI-RHRNLVKIITSCVSVDFQGNDFEAL 240 (484)
Q Consensus 165 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~l 240 (484)
+.||+|+||.||+|+.. .++..||+|+++... ......+..|..++..+ +||||+++++++ ...+..++
T Consensus 1 ~~lG~G~~g~V~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~-----~~~~~~~l 73 (318)
T cd05570 1 KVLGKGSFGKVLLAELK--GTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCF-----QTKDRLFF 73 (318)
T ss_pred CeeeeCCCeEEEEEEEC--CCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEE-----EcCCEEEE
Confidence 46999999999999854 456789999997542 23345677888999888 799999999985 34558899
Q ss_pred EeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccccc
Q 011508 241 VYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFL 320 (484)
Q Consensus 241 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~ 320 (484)
||||+++|+|..++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 74 v~e~~~~~~L~~~~~~~----~~l~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 146 (318)
T cd05570 74 VMEYVNGGDLMFHIQRS----GRFDEPRARFYAAEIVLGLQFLH---ERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEG 146 (318)
T ss_pred EEcCCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---hCCeEccCCCHHHeEECCCCcEEecccCCCeec
Confidence 99999999999988743 35899999999999999999999 899999999999999999999999999998643
Q ss_pred ccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchhhh
Q 011508 321 PEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPERLA 400 (484)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 400 (484)
.... .......|+..|+|||++.+..++.++|||||||++|+|++|+.||..... ......
T Consensus 147 ~~~~-------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~-----~~~~~~------- 207 (318)
T cd05570 147 ILGG-------VTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDE-----DELFQS------- 207 (318)
T ss_pred CcCC-------CcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCH-----HHHHHH-------
Confidence 2111 111234589999999999999999999999999999999999999965321 111110
Q ss_pred hhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCH-----HHHHHH
Q 011508 401 EIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNM-----EEVAAQ 462 (484)
Q Consensus 401 ~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~-----~evl~~ 462 (484)
+....... +..++..+.+++.+||+.||++|||+ .++++.
T Consensus 208 -i~~~~~~~---------------------~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~ 252 (318)
T cd05570 208 -ILEDEVRY---------------------PRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGH 252 (318)
T ss_pred -HHcCCCCC---------------------CCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence 10000000 11225578899999999999999999 777653
No 168
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=5.4e-39 Score=305.80 Aligned_cols=269 Identities=26% Similarity=0.280 Sum_probs=205.3
Q ss_pred cHHhHHHhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcC-CCCCceeEeeeee
Q 011508 150 SYQNLFKATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSI-RHRNLVKIITSCV 228 (484)
Q Consensus 150 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~ 228 (484)
...++..++++|.+.+.||+|+||.||+|... .+++.+|+|++.... .....+.+|+.++.++ +|||++++++++.
T Consensus 13 ~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~--~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~ 89 (291)
T cd06639 13 GLESLGDPTDTWEIIETIGKGTYGKVYKVTNK--KDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFY 89 (291)
T ss_pred hcccCCCCCCCeEEEEEeecCCCeEEEEEEEC--CCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEE
Confidence 34555667889999999999999999999843 457889999986432 2345678899999999 8999999999986
Q ss_pred eeccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCc
Q 011508 229 SVDFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELT 308 (484)
Q Consensus 229 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~ 308 (484)
..+.......++||||+++++|.++++........+++..++.++.|++.||+||| +.+++||||||+||+++.++.
T Consensus 90 ~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~nili~~~~~ 166 (291)
T cd06639 90 KADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLH---NNRIIHRDVKGNNILLTTEGG 166 (291)
T ss_pred eccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEEcCCCC
Confidence 54433445789999999999999998754434456899999999999999999999 899999999999999999999
Q ss_pred eEEcccCcccccccccccCCCCccccccccccccccCccccCCC-----CCCcccceehhhHHHHHHHhCCCCCCCCccC
Q 011508 309 AHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGS-----EVSTSGDVYSFGILLLEMFTGKGPTNEMFTG 383 (484)
Q Consensus 309 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-----~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~ 383 (484)
+||+|||++....... .......++..|+|||.+... .++.++|||||||++|||++|+.||......
T Consensus 167 ~kl~dfg~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~ 239 (291)
T cd06639 167 VKLVDFGVSAQLTSTR-------LRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPV 239 (291)
T ss_pred EEEeecccchhccccc-------ccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHH
Confidence 9999999987653221 111223578899999987543 3688999999999999999999998653211
Q ss_pred CccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 384 NLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
. .+.++... ..+.+.. ++.....+.+++.+|++.+|++||++.|+++.
T Consensus 240 ~-~~~~~~~~---------~~~~~~~---------------------~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 240 K-TLFKIPRN---------PPPTLLH---------------------PEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred H-HHHHHhcC---------CCCCCCc---------------------ccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 0 00000000 0000000 11124568899999999999999999999863
No 169
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3e-40 Score=318.86 Aligned_cols=245 Identities=26% Similarity=0.375 Sum_probs=199.6
Q ss_pred ccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCceeeEEeecc
Q 011508 166 LIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFEALVYELM 245 (484)
Q Consensus 166 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 245 (484)
+||+|.||+||.|+ +..+...+|||-+........+.+..|+.+-++|+|.|||+++|.| ..+++.-|.||.+
T Consensus 582 VLGKGTYG~VYA~R--D~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~-----senGf~kIFMEqV 654 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAAR--DMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSV-----SENGFFKIFMEQV 654 (1226)
T ss_pred EeecCceeEEEeec--cccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhcc-----CCCCeEEEEeecC
Confidence 59999999999998 5667889999999877766777899999999999999999999995 4455888999999
Q ss_pred cCCCHHHHHhhcCCCCCCC--CHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeee-cCCCceEEcccCccccccc
Q 011508 246 VNGSLEEWLHLNRDAPRNL--NLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLL-DGELTAHVSDFGLAKFLPE 322 (484)
Q Consensus 246 ~~gsL~~~l~~~~~~~~~l--~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll-~~~~~~kl~Dfg~a~~~~~ 322 (484)
+||+|.++++... .++ .+..+-.+.+||++||.||| .+.|||||||-+|+|+ +-.|.+||+|||.++.+..
T Consensus 655 PGGSLSsLLrskW---GPlKDNEstm~fYtkQILeGLkYLH---en~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAg 728 (1226)
T KOG4279|consen 655 PGGSLSSLLRSKW---GPLKDNESTMNFYTKQILEGLKYLH---ENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAG 728 (1226)
T ss_pred CCCcHHHHHHhcc---CCCccchhHHHHHHHHHHHHhhhhh---hcceeeccccCCcEEEeeccceEEecccccchhhcc
Confidence 9999999998544 334 67777888999999999999 9999999999999999 4678999999999987632
Q ss_pred ccccCCCCccccccccccccccCccccCCC--CCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchhhh
Q 011508 323 AANNLSSNQSSSVGVKGTVGYAAPEYGMGS--EVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPERLA 400 (484)
Q Consensus 323 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~--~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 400 (484)
-.+....+.||..|||||++..+ .|+.++|||||||++.||.||++||.......... .+ -.+.
T Consensus 729 -------inP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAM---Fk----VGmy 794 (1226)
T KOG4279|consen 729 -------INPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAM---FK----VGMY 794 (1226)
T ss_pred -------CCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhh---hh----hcce
Confidence 23455567799999999998765 58899999999999999999999997653322110 00 0000
Q ss_pred hhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 401 EIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 401 ~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
.+ .|. .+++...+...++++|+.+||.+||+++++++
T Consensus 795 Kv-HP~-----------------------iPeelsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 795 KV-HPP-----------------------IPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred ec-CCC-----------------------CcHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 00 000 14455778889999999999999999999985
No 170
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=1.6e-39 Score=313.89 Aligned_cols=238 Identities=28% Similarity=0.323 Sum_probs=183.7
Q ss_pred CccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHH-HHHcCCCCCceeEeeeeeeeccCCCceeeE
Q 011508 165 NLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQ-ALRSIRHRNLVKIITSCVSVDFQGNDFEAL 240 (484)
Q Consensus 165 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 240 (484)
+.||+|+||+||+|+. ..+++.||+|++.... ......+..|.. +++.++||||+++++.+ ..++..++
T Consensus 1 ~~lg~G~~g~V~~~~~--~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~-----~~~~~~~l 73 (323)
T cd05575 1 KVIGKGSFGKVLLAKH--KADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSF-----QTADKLYF 73 (323)
T ss_pred CeeeeCCCeEEEEEEE--CCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEE-----EeCCEEEE
Confidence 4699999999999994 4467889999987532 122234555554 56789999999999885 34558899
Q ss_pred EeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccccc
Q 011508 241 VYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFL 320 (484)
Q Consensus 241 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~ 320 (484)
||||+++|+|.+++... ..+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||++...
T Consensus 74 v~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH---~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~ 146 (323)
T cd05575 74 VLDYVNGGELFFHLQRE----RSFPEPRARFYAAEIASALGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEG 146 (323)
T ss_pred EEcCCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHeEECCCCcEEEeccCCCccc
Confidence 99999999999998743 35889999999999999999999 899999999999999999999999999998753
Q ss_pred ccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchhhh
Q 011508 321 PEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPERLA 400 (484)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 400 (484)
... ........||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..+....
T Consensus 147 ~~~-------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~-----~~~~~~~------- 207 (323)
T cd05575 147 IEH-------SKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRD-----TAEMYDN------- 207 (323)
T ss_pred ccC-------CCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCC-----HHHHHHH-------
Confidence 211 111223468999999999999999999999999999999999999996531 1111111
Q ss_pred hhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHH
Q 011508 401 EIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNME 457 (484)
Q Consensus 401 ~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ 457 (484)
+....... ....+..+.+++.+|++.||++||++.
T Consensus 208 -i~~~~~~~---------------------~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 208 -ILNKPLRL---------------------KPNISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred -HHcCCCCC---------------------CCCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 11110000 011245688999999999999999985
No 171
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=1.4e-39 Score=320.48 Aligned_cols=278 Identities=20% Similarity=0.235 Sum_probs=196.0
Q ss_pred CCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC--ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH--RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
+|++.+.||+|+||.||+|.. ..+++.||+|.+.... ....+.+.+|+++++.++|+||+++++++...+......
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~--~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 78 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTD--PRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEE 78 (372)
T ss_pred CCcccceeeeCCCEEEEEEEE--CCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccce
Confidence 478889999999999999984 3457889999986432 223467889999999999999999999865433222236
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
.++|+||+. ++|.+++.. ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 79 ~~lv~e~~~-~~l~~~~~~----~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a 150 (372)
T cd07853 79 IYVVTELMQ-SDLHKIIVS----PQPLSSDHVKVFLYQILRGLKYLH---SAGILHRDIKPGNLLVNSNCVLKICDFGLA 150 (372)
T ss_pred EEEEeeccc-cCHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChHHEEECCCCCEEeccccce
Confidence 799999995 688887753 345899999999999999999999 899999999999999999999999999999
Q ss_pred cccccccccCCCCccccccccccccccCccccCCC-CCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcc
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGS-EVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALP 396 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 396 (484)
+....... .......++..|+|||++.+. .++.++||||+||++|||++|+.||....... .+. .+.....
T Consensus 151 ~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~-~i~~~~g 222 (372)
T cd07853 151 RVEEPDES------KHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQ-QLD-LITDLLG 222 (372)
T ss_pred eecccCcc------ccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHH-HHH-HHHHHcC
Confidence 86532211 111223578899999988764 57899999999999999999999997542211 111 1111000
Q ss_pred hh-hhhh---cC---cccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 397 ER-LAEI---VD---PVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 397 ~~-~~~~---~d---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
.. ..++ .+ ..+......... . .. ..........++.+++.+||+.||++|||+.|+++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~-~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 223 TPSLEAMRSACEGARAHILRGPHKPPS--L----PV-LYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred CCCHHHHHHhhHHHHHHHHhCCCCCCc--h----HH-hcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 00 0000 00 000000000000 0 00 000011225678899999999999999999999864
No 172
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=1.1e-38 Score=298.13 Aligned_cols=253 Identities=26% Similarity=0.396 Sum_probs=198.2
Q ss_pred CccccccceeEEEEEEcCC-CCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCceeeEEe
Q 011508 165 NLIGAGSFGSVYKGIFDHD-DHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFEALVY 242 (484)
Q Consensus 165 ~~lg~G~~g~Vy~~~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 242 (484)
+.||+|++|.||+|.+... .....||+|.+..... ...+.+.+|+.++++++|+||+++++.+.. ...++|+
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------~~~~~v~ 74 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT------HPLMMVT 74 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC------CeEEEEE
Confidence 4689999999999997653 2334799999986655 455789999999999999999999998643 5789999
Q ss_pred ecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccccccc
Q 011508 243 ELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFLPE 322 (484)
Q Consensus 243 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~~~ 322 (484)
||+++++|.+++..... ..+++..++.++.|++.||+||| +++++|+||+|+||+++.++.+||+|||++..+..
T Consensus 75 e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~ 149 (257)
T cd05040 75 ELAPLGSLLDRLRKDAL--GHFLISTLCDYAVQIANGMRYLE---SKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQ 149 (257)
T ss_pred EecCCCcHHHHHHhccc--ccCcHHHHHHHHHHHHHHHHHHH---hCCccccccCcccEEEecCCEEEeccccccccccc
Confidence 99999999999975432 46899999999999999999999 89999999999999999999999999999987643
Q ss_pred ccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhhcchhhhh
Q 011508 323 AANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEALPERLAE 401 (484)
Q Consensus 323 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (484)
.... ........++..|+|||++.+..++.++|||||||++|||++ |+.||...... +..... ..
T Consensus 150 ~~~~----~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-----~~~~~~-----~~ 215 (257)
T cd05040 150 NEDH----YVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGS-----QILKKI-----DK 215 (257)
T ss_pred cccc----eecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHH-----Hh
Confidence 2211 011112446788999999988889999999999999999999 99998643111 111100 00
Q ss_pred hcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHH
Q 011508 402 IVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLL 464 (484)
Q Consensus 402 ~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 464 (484)
. ..... .+..++..+.+++.+|++.+|++|||+.||++.|.
T Consensus 216 ~-~~~~~---------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 216 E-GERLE---------------------RPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred c-CCcCC---------------------CCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 0 00000 01123567899999999999999999999999875
No 173
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.5e-40 Score=284.43 Aligned_cols=252 Identities=25% Similarity=0.368 Sum_probs=200.3
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccc--------hHHHHHHHHHHHcC-CCCCceeEeeeeee
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGA--------SKSFIAECQALRSI-RHRNLVKIITSCVS 229 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~--------~~~~~~e~~~l~~l-~h~niv~~~~~~~~ 229 (484)
..|...+.||.|..++|-+.. +..++..+|+|++....... .+.-.+|+.+|+++ .||+|+++.++
T Consensus 17 ~~y~pkeilgrgvss~vrRci--~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~--- 91 (411)
T KOG0599|consen 17 AKYEPKEILGRGVSSVVRRCI--HKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDV--- 91 (411)
T ss_pred hhcChHHHhcccchhhhhhhh--hcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeee---
Confidence 457777899999999999988 55567889999987443211 24566899999998 79999999998
Q ss_pred eccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCce
Q 011508 230 VDFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTA 309 (484)
Q Consensus 230 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~ 309 (484)
++.+.+.++|+|.|+.|.|.++|.. ...+++....+|++|+..|++||| .++||||||||+|||++++.++
T Consensus 92 --yes~sF~FlVFdl~prGELFDyLts----~VtlSEK~tR~iMrqlfegVeylH---a~~IVHRDLKpENILlddn~~i 162 (411)
T KOG0599|consen 92 --YESDAFVFLVFDLMPRGELFDYLTS----KVTLSEKETRRIMRQLFEGVEYLH---ARNIVHRDLKPENILLDDNMNI 162 (411)
T ss_pred --ccCcchhhhhhhhcccchHHHHhhh----heeecHHHHHHHHHHHHHHHHHHH---HhhhhhcccChhheeeccccce
Confidence 5666789999999999999999973 346999999999999999999999 9999999999999999999999
Q ss_pred EEcccCcccccccccccCCCCccccccccccccccCccccCC------CCCCcccceehhhHHHHHHHhCCCCCCCCccC
Q 011508 310 HVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG------SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTG 383 (484)
Q Consensus 310 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~------~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~ 383 (484)
||+|||++..+.+.. .....+||++|.|||.+.. ..|+...|+|++||+||.|+.|.+||..- .
T Consensus 163 ~isDFGFa~~l~~Ge--------kLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHR--k 232 (411)
T KOG0599|consen 163 KISDFGFACQLEPGE--------KLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHR--K 232 (411)
T ss_pred EEeccceeeccCCch--------hHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHH--H
Confidence 999999999875433 3345789999999998654 35788999999999999999999998531 0
Q ss_pred CccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 384 NLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
... + +.-+..-... ..+..+.+......+|+.+||+.||.+|.|++|+++.
T Consensus 233 Qml---M--------LR~ImeGkyq-----------------F~speWadis~~~KdLIsrlLqVdp~~Ritake~LaH 283 (411)
T KOG0599|consen 233 QML---M--------LRMIMEGKYQ-----------------FRSPEWADISATVKDLISRLLQVDPTKRITAKEALAH 283 (411)
T ss_pred HHH---H--------HHHHHhcccc-----------------cCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcC
Confidence 000 0 0111111110 1111144556778999999999999999999999965
No 174
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=7.2e-39 Score=299.01 Aligned_cols=251 Identities=25% Similarity=0.357 Sum_probs=198.9
Q ss_pred CCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC--ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH--RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
+|++.+.||+|++|.||+|+.. .++..|++|.+.... ......+.+|+++++.++|||++++++++. .++.
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~--~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~ 73 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRK--ADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFL-----DKGK 73 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEc--CCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeec-----cCCE
Confidence 4778899999999999999854 356889999987432 234567889999999999999999999853 3458
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
.++||||+++++|.+++.... ...+++..++.++.|++.||.||| +.+++|+||||+||++++++.++|+|||.+
T Consensus 74 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~~l~~al~~lH---~~~i~h~dl~~~nili~~~~~~~l~df~~~ 148 (256)
T cd08529 74 LNIVMEYAENGDLHKLLKMQR--GRPLPEDQVWRFFIQILLGLAHLH---SKKILHRDIKSLNLFLDAYDNVKIGDLGVA 148 (256)
T ss_pred EEEEEEeCCCCcHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEeCCCCEEEcccccc
Confidence 899999999999999998542 345889999999999999999999 899999999999999999999999999998
Q ss_pred cccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcch
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPE 397 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 397 (484)
....... .......++..|+|||+..+..++.++||||||+++|+|++|+.||..... ......
T Consensus 149 ~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~---- 212 (256)
T cd08529 149 KLLSDNT-------NFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQ-----GALILK---- 212 (256)
T ss_pred eeccCcc-------chhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCH-----HHHHHH----
Confidence 8664321 111223578899999999988899999999999999999999999965321 111110
Q ss_pred hhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 398 RLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 398 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
+....... ....+...+.+++.+||+.+|++||++.++++.
T Consensus 213 ----~~~~~~~~--------------------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 213 ----IIRGVFPP--------------------VSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred ----HHcCCCCC--------------------CccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 00000000 011225678999999999999999999999863
No 175
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=2.8e-39 Score=307.27 Aligned_cols=265 Identities=25% Similarity=0.364 Sum_probs=201.3
Q ss_pred HhcCCCCccCccccccceeEEEEEEcCC---CCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeec
Q 011508 156 KATDGFSLENLIGAGSFGSVYKGIFDHD---DHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVD 231 (484)
Q Consensus 156 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~---~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 231 (484)
...++|++.+.||+|+||.||+|...+. ..+..||+|.++.... .....+.+|+..++.++|+||+++++++.
T Consensus 3 ~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~--- 79 (288)
T cd05061 3 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVS--- 79 (288)
T ss_pred ccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEc---
Confidence 3567899999999999999999975432 2345799998764432 22346788999999999999999999853
Q ss_pred cCCCceeeEEeecccCCCHHHHHhhcCCC------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecC
Q 011508 232 FQGNDFEALVYELMVNGSLEEWLHLNRDA------PRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDG 305 (484)
Q Consensus 232 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~ 305 (484)
.+...++||||+++|+|.+++...... ....++..+..++.|++.||+||| +++|+||||||+||++++
T Consensus 80 --~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dikp~nili~~ 154 (288)
T cd05061 80 --KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAH 154 (288)
T ss_pred --CCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCCChheEEEcC
Confidence 344789999999999999999753211 234577888999999999999999 899999999999999999
Q ss_pred CCceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCC
Q 011508 306 ELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGN 384 (484)
Q Consensus 306 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~ 384 (484)
++.++|+|||+++....... ........++..|+|||.+.+..++.++|||||||++|||++ |..||.....
T Consensus 155 ~~~~~L~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~-- 227 (288)
T cd05061 155 DFTVKIGDFGMTRDIYETDY-----YRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN-- 227 (288)
T ss_pred CCcEEECcCCcccccccccc-----ccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCH--
Confidence 99999999999876532211 011111235678999999988889999999999999999999 7888865311
Q ss_pred ccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHH
Q 011508 385 LTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLL 464 (484)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 464 (484)
.+... .+.+..... .+..++..+.+++.+|++.||++|||+.|+++.|+
T Consensus 228 ---~~~~~--------~~~~~~~~~--------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~ 276 (288)
T cd05061 228 ---EQVLK--------FVMDGGYLD--------------------QPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 276 (288)
T ss_pred ---HHHHH--------HHHcCCCCC--------------------CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 11111 111110000 01223567899999999999999999999998887
Q ss_pred HH
Q 011508 465 SF 466 (484)
Q Consensus 465 ~i 466 (484)
+.
T Consensus 277 ~~ 278 (288)
T cd05061 277 DD 278 (288)
T ss_pred hh
Confidence 64
No 176
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=3.4e-39 Score=318.86 Aligned_cols=207 Identities=23% Similarity=0.304 Sum_probs=169.6
Q ss_pred CCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCc
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
.|++.+.||+|+||.||+|+. ..+++.||+|++.... ......+.+|+.++++++|+||+++++.+. +++
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~--~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~-----~~~ 74 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARK--VDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQ-----DKD 74 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEE--CCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEE-----eCC
Confidence 588899999999999999984 4467889999987532 223456889999999999999999999853 455
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCc
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGL 316 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 316 (484)
..++||||+++|+|.+++... ..+++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+
T Consensus 75 ~~~lv~E~~~gg~L~~~l~~~----~~~~e~~~~~~~~qi~~al~~lH---~~~ivHrDlKp~NILl~~~g~~kL~DFGl 147 (382)
T cd05625 75 NLYFVMDYIPGGDMMSLLIRM----GIFPEDLARFYIAELTCAVESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGL 147 (382)
T ss_pred EEEEEEeCCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEeECCC
Confidence 899999999999999998743 34788899999999999999999 89999999999999999999999999999
Q ss_pred ccccccccccC----------------------------------------CCCccccccccccccccCccccCCCCCCc
Q 011508 317 AKFLPEAANNL----------------------------------------SSNQSSSVGVKGTVGYAAPEYGMGSEVST 356 (484)
Q Consensus 317 a~~~~~~~~~~----------------------------------------~~~~~~~~~~~g~~~y~aPE~~~~~~~~~ 356 (484)
+..+....... ...........||+.|+|||++.+..++.
T Consensus 148 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~ 227 (382)
T cd05625 148 CTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQ 227 (382)
T ss_pred CccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCC
Confidence 75432110000 00000112346899999999999989999
Q ss_pred ccceehhhHHHHHHHhCCCCCCCC
Q 011508 357 SGDVYSFGILLLEMFTGKGPTNEM 380 (484)
Q Consensus 357 ~~Dvws~Gvvl~elltg~~p~~~~ 380 (484)
++||||+||++|||++|+.||...
T Consensus 228 ~~DiwSlGvil~elltG~~Pf~~~ 251 (382)
T cd05625 228 LCDWWSVGVILYEMLVGQPPFLAQ 251 (382)
T ss_pred eeeEEechHHHHHHHhCCCCCCCC
Confidence 999999999999999999999753
No 177
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=2.7e-39 Score=311.04 Aligned_cols=241 Identities=24% Similarity=0.304 Sum_probs=186.7
Q ss_pred CccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcC-CCCCceeEeeeeeeeccCCCceeeE
Q 011508 165 NLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSI-RHRNLVKIITSCVSVDFQGNDFEAL 240 (484)
Q Consensus 165 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~l 240 (484)
+.||+|+||.||+|+.. .++..||+|+++... .........|..++... +||||+++++++ ..++..++
T Consensus 1 ~~lg~G~~g~V~~~~~~--~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~-----~~~~~~~l 73 (316)
T cd05620 1 KVLGKGSFGKVLLAELK--GKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTF-----QTKEHLFF 73 (316)
T ss_pred CeeeeCCCeEEEEEEEC--CCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEE-----EeCCEEEE
Confidence 46999999999999954 457889999997542 22335567788888754 899999999885 44558999
Q ss_pred EeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccccc
Q 011508 241 VYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFL 320 (484)
Q Consensus 241 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~ 320 (484)
||||+++|+|.+++... ..+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++..
T Consensus 74 v~E~~~~g~L~~~i~~~----~~~~~~~~~~~~~qi~~~l~~lH---~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~ 146 (316)
T cd05620 74 VMEFLNGGDLMFHIQDK----GRFDLYRATFYAAEIVCGLQFLH---SKGIIYRDLKLDNVMLDRDGHIKIADFGMCKEN 146 (316)
T ss_pred EECCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEeCccCCCeec
Confidence 99999999999998643 35889999999999999999999 899999999999999999999999999998643
Q ss_pred ccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchhhh
Q 011508 321 PEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPERLA 400 (484)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 400 (484)
... ........||..|+|||++.+..++.++||||+||++|||++|+.||..... ....... .
T Consensus 147 ~~~-------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~-----~~~~~~~-----~ 209 (316)
T cd05620 147 VFG-------DNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDE-----DELFESI-----R 209 (316)
T ss_pred ccC-------CCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH-----HHHHHHH-----H
Confidence 211 1112335689999999999999999999999999999999999999965321 1111100 0
Q ss_pred hhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHH-HHH
Q 011508 401 EIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNME-EVA 460 (484)
Q Consensus 401 ~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~-evl 460 (484)
. ..+.+ +..+..++.+++.+||+.||++||++. ++.
T Consensus 210 ~-~~~~~-----------------------~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 210 V-DTPHY-----------------------PRWITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred h-CCCCC-----------------------CCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 0 00000 111245678999999999999999985 554
No 178
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.4e-39 Score=339.46 Aligned_cols=260 Identities=20% Similarity=0.289 Sum_probs=198.8
Q ss_pred HhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccC
Q 011508 156 KATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQ 233 (484)
Q Consensus 156 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 233 (484)
...++|.+.+.||+|+||.||+|... .++..+|+|.+..... .....+..|+.++++++||||+++++++.. .
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk--~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~d---e 84 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHK--RTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLN---K 84 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEEC--CCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEe---c
Confidence 34568999999999999999999954 4678899999875432 234678899999999999999999998643 2
Q ss_pred CCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC----CCCeeecCCCCCCeeecCC---
Q 011508 234 GNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYC----ETPIVHCDLKPSNVLLDGE--- 306 (484)
Q Consensus 234 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~----~~~ivH~dlk~~NIll~~~--- 306 (484)
.....++||||+++|+|.+++.........+++..++.|+.||+.||+|||+.. .++|+||||||+||||+.+
T Consensus 85 ~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~ 164 (1021)
T PTZ00266 85 ANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRH 164 (1021)
T ss_pred CCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccc
Confidence 345789999999999999999765444456999999999999999999999431 1569999999999999642
Q ss_pred --------------CceEEcccCcccccccccccCCCCccccccccccccccCccccCC--CCCCcccceehhhHHHHHH
Q 011508 307 --------------LTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG--SEVSTSGDVYSFGILLLEM 370 (484)
Q Consensus 307 --------------~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~~Dvws~Gvvl~el 370 (484)
..+||+|||++..+.... ......||+.|+|||++.+ ..++.++|||||||++|||
T Consensus 165 lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s--------~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYEL 236 (1021)
T PTZ00266 165 IGKITAQANNLNGRPIAKIGDFGLSKNIGIES--------MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYEL 236 (1021)
T ss_pred cccccccccccCCCCceEEccCCccccccccc--------cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHH
Confidence 358999999997653221 1123468999999998754 4588999999999999999
Q ss_pred HhCCCCCCCCccCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCc
Q 011508 371 FTGKGPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELP 450 (484)
Q Consensus 371 ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP 450 (484)
+||+.||.... ....++..... . +.+. ....+.++.+|+..||+.+|
T Consensus 237 LTGk~PF~~~~----~~~qli~~lk~-----~--p~lp----------------------i~~~S~eL~dLI~~~L~~dP 283 (1021)
T PTZ00266 237 CSGKTPFHKAN----NFSQLISELKR-----G--PDLP----------------------IKGKSKELNILIKNLLNLSA 283 (1021)
T ss_pred HHCCCCCCcCC----cHHHHHHHHhc-----C--CCCC----------------------cCCCCHHHHHHHHHHhcCCh
Confidence 99999996421 11111111000 0 0000 01124578899999999999
Q ss_pred CCCCCHHHHHH
Q 011508 451 RERMNMEEVAA 461 (484)
Q Consensus 451 ~~RPt~~evl~ 461 (484)
.+||++.|++.
T Consensus 284 eeRPSa~QlL~ 294 (1021)
T PTZ00266 284 KERPSALQCLG 294 (1021)
T ss_pred hHCcCHHHHhc
Confidence 99999999985
No 179
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=2.4e-38 Score=297.58 Aligned_cols=257 Identities=23% Similarity=0.344 Sum_probs=188.0
Q ss_pred CccccccceeEEEEEEcCCCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCceeeEEee
Q 011508 165 NLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFEALVYE 243 (484)
Q Consensus 165 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 243 (484)
+.||+|+||.||+|..........+++|.+..... ...+.+.+|+.+++.++||||+++++.|.. ....++|||
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~-----~~~~~lv~e 75 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVE-----AIPYLLVFE 75 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecC-----CCccEEEEe
Confidence 36999999999999865544455677787764432 344688999999999999999999998643 447899999
Q ss_pred cccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcccccccc
Q 011508 244 LMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFLPEA 323 (484)
Q Consensus 244 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~~~~ 323 (484)
|+++|+|.+++..........++..++.++.|++.||+||| +.+++||||||+||+++.++.+||+|||++......
T Consensus 76 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~ 152 (268)
T cd05086 76 YCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMH---KHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKE 152 (268)
T ss_pred cCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHH---HCCeeccCCccceEEEcCCccEEecccccccccCcc
Confidence 99999999999864433345677888899999999999999 899999999999999999999999999987643211
Q ss_pred cccCCCCccccccccccccccCccccCC-------CCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhhc
Q 011508 324 ANNLSSNQSSSVGVKGTVGYAAPEYGMG-------SEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEAL 395 (484)
Q Consensus 324 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~-------~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 395 (484)
. .........++..|+|||++.. ..++.++|||||||++|||++ |..||..... ........
T Consensus 153 ~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~-----~~~~~~~~ 222 (268)
T cd05086 153 D-----YIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSD-----REVLNHVI 222 (268)
T ss_pred h-----hhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHH
Confidence 1 0111123457889999998743 245789999999999999997 5667754211 11111111
Q ss_pred chhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHH
Q 011508 396 PERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQL 463 (484)
Q Consensus 396 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 463 (484)
.+......++.+.. .....+.+++..|| .+|++||+++||++.|
T Consensus 223 ~~~~~~~~~~~~~~-----------------------~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l 266 (268)
T cd05086 223 KDQQVKLFKPQLEL-----------------------PYSERWYEVLQFCW-LSPEKRATAEEVHRLL 266 (268)
T ss_pred hhcccccCCCccCC-----------------------CCcHHHHHHHHHHh-hCcccCCCHHHHHHHh
Confidence 11111222222211 11445777888899 6799999999999877
No 180
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=6e-39 Score=314.49 Aligned_cols=204 Identities=25% Similarity=0.292 Sum_probs=167.6
Q ss_pred hcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC--ccchHHHHHHHHHHHcCCCCCceeEeeeeeeec-cC
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH--RGASKSFIAECQALRSIRHRNLVKIITSCVSVD-FQ 233 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~ 233 (484)
..++|++.+.||+|+||.||+++. ..++..||+|++.... ......+.+|+.+++.++||||+++++++.... ..
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 96 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFD--TVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLE 96 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEE--cCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcc
Confidence 347899999999999999999984 4467889999986432 233467889999999999999999999864322 11
Q ss_pred CCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcc
Q 011508 234 GNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSD 313 (484)
Q Consensus 234 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~D 313 (484)
.....++||||++ ++|.+.+. ..+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|
T Consensus 97 ~~~~~~lv~e~~~-~~l~~~~~------~~~~~~~~~~~~~qi~~~L~~LH---~~~ivHrDlkp~NIl~~~~~~~kl~D 166 (359)
T cd07876 97 EFQDVYLVMELMD-ANLCQVIH------MELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILD 166 (359)
T ss_pred ccceeEEEEeCCC-cCHHHHHh------ccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEec
Confidence 2235789999995 56776664 23788889999999999999999 89999999999999999999999999
Q ss_pred cCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCC
Q 011508 314 FGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEM 380 (484)
Q Consensus 314 fg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~ 380 (484)
||+++..... .......+|..|+|||.+.+..++.++|||||||++|+|++|+.||...
T Consensus 167 fg~a~~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~ 225 (359)
T cd07876 167 FGLARTACTN--------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGT 225 (359)
T ss_pred CCCccccccC--------ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence 9998754221 1112346889999999999999999999999999999999999999754
No 181
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=9.8e-39 Score=299.39 Aligned_cols=254 Identities=24% Similarity=0.298 Sum_probs=197.5
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc-----cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR-----GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQ 233 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 233 (484)
++|.+.+.||+|++|.||+|.. ..++..+|+|.+..... .....+.+|++++++++||||+++++++ .
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~--~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~ 74 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYD--VDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCL-----R 74 (263)
T ss_pred CcccccceecCCCceEEEEEEE--cCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEE-----c
Confidence 5789999999999999999984 34578899998864422 1235688899999999999999999985 3
Q ss_pred CCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcc
Q 011508 234 GNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSD 313 (484)
Q Consensus 234 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~D 313 (484)
.+...++|+||+++++|.+++... ..+++..+..++.|++.||+||| +.+++||||+|+||++++++.++|+|
T Consensus 75 ~~~~~~~v~e~~~~~~l~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nilv~~~~~~~l~d 147 (263)
T cd06625 75 DDETLSIFMEYMPGGSVKDQLKAY----GALTETVTRKYTRQILEGVEYLH---SNMIVHRDIKGANILRDSAGNVKLGD 147 (263)
T ss_pred cCCeEEEEEEECCCCcHHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEee
Confidence 445899999999999999998743 34788999999999999999999 89999999999999999999999999
Q ss_pred cCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHh
Q 011508 314 FGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKE 393 (484)
Q Consensus 314 fg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 393 (484)
||.++........ ........++..|+|||.+.+..++.++||||+|+++|||++|+.||..... ......
T Consensus 148 fg~~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~----~~~~~~- 218 (263)
T cd06625 148 FGASKRLQTICSS----GTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEA----MAAIFK- 218 (263)
T ss_pred cccceeccccccc----cccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccch----HHHHHH-
Confidence 9998765332110 1111223577899999999998899999999999999999999999865311 110000
Q ss_pred hcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 394 ALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 394 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
........ ..+..+...+.+++..||+.+|++|||+.|+++.
T Consensus 219 --------~~~~~~~~-------------------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 219 --------IATQPTNP-------------------QLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred --------HhccCCCC-------------------CCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 00000000 0012235678899999999999999999999864
No 182
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-39 Score=309.26 Aligned_cols=253 Identities=26% Similarity=0.322 Sum_probs=206.5
Q ss_pred hcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCcc---chHHHHHHHHHHHcCC-CCCceeEeeeeeeecc
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRG---ASKSFIAECQALRSIR-HRNLVKIITSCVSVDF 232 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~ 232 (484)
....|++.+.||+|.||.||+++ +..+++.+|+|++.+.... ..+.+.+|+.+|+++. ||||+.+.+. +
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~--~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~-----~ 105 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCR--EKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDA-----F 105 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEE--ecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEE-----E
Confidence 34678899999999999999999 4456889999999765432 3368899999999998 9999999999 4
Q ss_pred CCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCC----Cc
Q 011508 233 QGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGE----LT 308 (484)
Q Consensus 233 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~----~~ 308 (484)
+.....++|||++.||.|.+.+... .+++..+..++.|++.+++||| +.+|+||||||+|+|+... +.
T Consensus 106 e~~~~~~lvmEL~~GGeLfd~i~~~-----~~sE~da~~~~~~il~av~~lH---~~gvvHrDlKpEN~L~~~~~~~~~~ 177 (382)
T KOG0032|consen 106 EDPDSVYLVMELCEGGELFDRIVKK-----HYSERDAAGIIRQILEAVKYLH---SLGVVHRDLKPENLLLASKDEGSGR 177 (382)
T ss_pred EcCCeEEEEEEecCCchHHHHHHHc-----cCCHHHHHHHHHHHHHHHHHHH---hCCceeccCCHHHeeeccccCCCCc
Confidence 5556899999999999999999754 3899999999999999999999 8999999999999999543 47
Q ss_pred eEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHh
Q 011508 309 AHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLH 388 (484)
Q Consensus 309 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~ 388 (484)
+|++|||++..... .......+||+.|+|||++....|+..+||||+||++|.|++|..||..........
T Consensus 178 ik~~DFGla~~~~~--------~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~- 248 (382)
T KOG0032|consen 178 IKLIDFGLAKFIKP--------GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL- 248 (382)
T ss_pred EEEeeCCCceEccC--------CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH-
Confidence 99999999997643 233455789999999999999999999999999999999999999998753322211
Q ss_pred HHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 389 NFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 389 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
.+....+... ...+......+.+++..|+..||.+|+|+.++++.
T Consensus 249 ------------~i~~~~~~f~-----------------~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 249 ------------AILRGDFDFT-----------------SEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred ------------HHHcCCCCCC-----------------CCCccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 1111111110 00123346678899999999999999999999984
No 183
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=8.9e-39 Score=299.18 Aligned_cols=254 Identities=26% Similarity=0.451 Sum_probs=199.5
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
.++|++.++||+|+||.||+|... ++..||+|.+..... ....+.+|+.++++++|+|++++++++. .+.
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~---~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~------~~~ 74 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYN---GHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVVT------QEP 74 (260)
T ss_pred hHHceeeeeeccCccceEEeeecC---CCceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEEc------cCC
Confidence 357889999999999999999854 456799999875433 3467899999999999999999998731 235
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
.+++|||+++++|.+++.... ...+++.+++.++.|++.||+||| +.+++||||||+||+++.++.++|+|||.+
T Consensus 75 ~~~v~e~~~~~~L~~~~~~~~--~~~~~~~~~~~i~~~i~~al~~LH---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~ 149 (260)
T cd05067 75 IYIITEYMENGSLVDFLKTPE--GIKLTINKLIDMAAQIAEGMAFIE---RKNYIHRDLRAANILVSETLCCKIADFGLA 149 (260)
T ss_pred cEEEEEcCCCCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHHhEEEcCCCCEEEccCcce
Confidence 799999999999999987433 345889999999999999999999 899999999999999999999999999998
Q ss_pred cccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhhcc
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEALP 396 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 396 (484)
........ .......++..|+|||++....++.++||||||+++||+++ |+.||...... .......
T Consensus 150 ~~~~~~~~------~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~---- 217 (260)
T cd05067 150 RLIEDNEY------TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNP--EVIQNLE---- 217 (260)
T ss_pred eecCCCCc------ccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChH--HHHHHHH----
Confidence 76542211 11112345678999999988889999999999999999999 99999653211 0110000
Q ss_pred hhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHH
Q 011508 397 ERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLS 465 (484)
Q Consensus 397 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 465 (484)
...... .+..++.++.+++.+|++.+|++|||++++.+.|+.
T Consensus 218 --------~~~~~~-------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 218 --------RGYRMP-------------------RPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred --------cCCCCC-------------------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 000000 011125578999999999999999999999999875
No 184
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=3.6e-39 Score=303.08 Aligned_cols=253 Identities=23% Similarity=0.313 Sum_probs=195.8
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCcee
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFE 238 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 238 (484)
++|.+.+.||+|+||.||+|+. ..+++.||+|.++.........+.+|+.+++.++||||+++++.+. ..+..
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~--~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~-----~~~~~ 81 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARN--VNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYL-----RRDKL 81 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEE--cCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEE-----eCCEE
Confidence 4678889999999999999984 4457889999988665445567889999999999999999999854 34578
Q ss_pred eEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccc
Q 011508 239 ALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAK 318 (484)
Q Consensus 239 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~ 318 (484)
++||||+++++|.+++... ..+++.+++.++.|++.|++||| +.+++|+||||+||+++.++.++|+|||.+.
T Consensus 82 ~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nili~~~~~~~l~dfg~~~ 154 (267)
T cd06645 82 WICMEFCGGGSLQDIYHVT----GPLSESQIAYVSRETLQGLYYLH---SKGKMHRDIKGANILLTDNGHVKLADFGVSA 154 (267)
T ss_pred EEEEeccCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECcceeee
Confidence 9999999999999998643 35889999999999999999999 8899999999999999999999999999987
Q ss_pred ccccccccCCCCccccccccccccccCccccC---CCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhc
Q 011508 319 FLPEAANNLSSNQSSSVGVKGTVGYAAPEYGM---GSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEAL 395 (484)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 395 (484)
...... .......|+..|+|||++. ...++.++|||||||++|+|++|+.||........ .......
T Consensus 155 ~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~-~~~~~~~-- 224 (267)
T cd06645 155 QITATI-------AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA-LFLMTKS-- 224 (267)
T ss_pred EccCcc-------cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhh-HHhhhcc--
Confidence 653211 1112346889999999874 45688999999999999999999999864321110 0000000
Q ss_pred chhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 396 PERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 396 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
....+.... ...++..+.+++.+|++.+|++||++++|++
T Consensus 225 -----~~~~~~~~~---------------------~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 225 -----NFQPPKLKD---------------------KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred -----CCCCCcccc---------------------cCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 000000000 0012346789999999999999999999875
No 185
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=4.1e-39 Score=309.63 Aligned_cols=242 Identities=24% Similarity=0.353 Sum_probs=187.0
Q ss_pred CccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcC-CCCCceeEeeeeeeeccCCCceeeE
Q 011508 165 NLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSI-RHRNLVKIITSCVSVDFQGNDFEAL 240 (484)
Q Consensus 165 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~l 240 (484)
+.||+|+||.||+|+.. .+++.||+|+++... ......+..|..++... +||||+++++++. .++..++
T Consensus 1 ~~lG~G~~g~Vy~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~-----~~~~~~l 73 (316)
T cd05619 1 KMLGKGSFGKVFLAELK--GTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQ-----TKENLFF 73 (316)
T ss_pred CeeeeCCCEEEEEEEEC--CCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEE-----eCCEEEE
Confidence 46999999999999844 456889999997542 22335567788888764 9999999999853 4458899
Q ss_pred EeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccccc
Q 011508 241 VYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFL 320 (484)
Q Consensus 241 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~ 320 (484)
||||+++|+|.+++... ..+++.++..++.|++.||+||| +++|+||||||+||+++.++.+||+|||++...
T Consensus 74 v~ey~~~g~L~~~l~~~----~~~~~~~~~~~~~qi~~al~~LH---~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~ 146 (316)
T cd05619 74 VMEYLNGGDLMFHIQSC----HKFDLPRATFYAAEIICGLQFLH---SKGIVYRDLKLDNILLDTDGHIKIADFGMCKEN 146 (316)
T ss_pred EEeCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHEEECCCCCEEEccCCcceEC
Confidence 99999999999998743 34889999999999999999999 899999999999999999999999999998743
Q ss_pred ccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchhhh
Q 011508 321 PEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPERLA 400 (484)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 400 (484)
... ........||..|+|||++.+..++.++|||||||++|||++|+.||..... .+......
T Consensus 147 ~~~-------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~-----~~~~~~i~----- 209 (316)
T cd05619 147 MLG-------DAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDE-----EELFQSIR----- 209 (316)
T ss_pred CCC-------CCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCH-----HHHHHHHH-----
Confidence 211 1112234689999999999988999999999999999999999999975321 11111000
Q ss_pred hhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHH-HHHH
Q 011508 401 EIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNME-EVAA 461 (484)
Q Consensus 401 ~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~-evl~ 461 (484)
...+.. +..+..++.+++.+||+.||++||++. ++.+
T Consensus 210 -~~~~~~-----------------------~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05619 210 -MDNPCY-----------------------PRWLTREAKDILVKLFVREPERRLGVKGDIRQ 247 (316)
T ss_pred -hCCCCC-----------------------CccCCHHHHHHHHHHhccCHhhcCCChHHHHc
Confidence 000000 111245678999999999999999997 5543
No 186
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.6e-39 Score=295.61 Aligned_cols=258 Identities=27% Similarity=0.337 Sum_probs=204.4
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
+.|++.+.||.|.-|+||++.+.. ++..+|+|++.+.. .....+...|-+||+.++||.+..+|.. ++.+
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~--t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~-----fet~ 149 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRG--TNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYAS-----FETD 149 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecC--CCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhhe-----eecc
Confidence 346778899999999999999654 45899999998653 3344677889999999999999999998 6677
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
++.|+|||||+||+|..+++.+ ..+.+++..+.-++..++-||+||| ..|||.|||||+||||.++|++.|+||.
T Consensus 150 ~~~cl~meyCpGGdL~~LrqkQ--p~~~fse~~aRFYaAEvl~ALEYLH---mlGivYRDLKPENILvredGHIMLsDFD 224 (459)
T KOG0610|consen 150 KYSCLVMEYCPGGDLHSLRQKQ--PGKRFSESAARFYAAEVLLALEYLH---MLGIVYRDLKPENILVREDGHIMLSDFD 224 (459)
T ss_pred ceeEEEEecCCCccHHHHHhhC--CCCccchhhHHHHHHHHHHHHHHHH---hhceeeccCCcceeEEecCCcEEeeecc
Confidence 7999999999999999998854 4567999999999999999999999 8999999999999999999999999999
Q ss_pred ccccccccccc-----------------------------C--------------------CCCccccccccccccccCc
Q 011508 316 LAKFLPEAANN-----------------------------L--------------------SSNQSSSVGVKGTVGYAAP 346 (484)
Q Consensus 316 ~a~~~~~~~~~-----------------------------~--------------------~~~~~~~~~~~g~~~y~aP 346 (484)
++......... . ......+..++||-.|.||
T Consensus 225 LS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAP 304 (459)
T KOG0610|consen 225 LSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAP 304 (459)
T ss_pred ccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccc
Confidence 87543210000 0 0011223457899999999
Q ss_pred cccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccc
Q 011508 347 EYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRT 426 (484)
Q Consensus 347 E~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~ 426 (484)
|++.+...+.+.|.|+|||++|||+.|..||.+..... . +..++-+.+..-.
T Consensus 305 EvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~-T------------l~NIv~~~l~Fp~--------------- 356 (459)
T KOG0610|consen 305 EVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKE-T------------LRNIVGQPLKFPE--------------- 356 (459)
T ss_pred eeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchh-h------------HHHHhcCCCcCCC---------------
Confidence 99999999999999999999999999999998854332 2 2223322221100
Q ss_pred cccchhHHHHHHHhHhhccCCCCcCCCCC----HHHHH
Q 011508 427 RSFGGKECLVSVLGIGVICSSELPRERMN----MEEVA 460 (484)
Q Consensus 427 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPt----~~evl 460 (484)
..+....+.+||++.|..||++|-. +.||-
T Consensus 357 ----~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK 390 (459)
T KOG0610|consen 357 ----EPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIK 390 (459)
T ss_pred ----CCcchhHHHHHHHHHhccChhhhhccccchHHhh
Confidence 1123567899999999999999998 66654
No 187
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=1.6e-39 Score=313.22 Aligned_cols=241 Identities=26% Similarity=0.282 Sum_probs=188.6
Q ss_pred CccccccceeEEEEEEc-CCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCceeeEE
Q 011508 165 NLIGAGSFGSVYKGIFD-HDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFEALV 241 (484)
Q Consensus 165 ~~lg~G~~g~Vy~~~~~-~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 241 (484)
+.||+|+||.||+++.. +..+++.||+|++..... .....+.+|++++++++||||+++++++ ..+...++|
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-----~~~~~~~lv 76 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAF-----QTEGKLYLI 76 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEE-----EcCCEEEEE
Confidence 57999999999998753 234678999999975432 2234577899999999999999999885 345588999
Q ss_pred eecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcccccc
Q 011508 242 YELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFLP 321 (484)
Q Consensus 242 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~~ 321 (484)
|||+++|+|.+++... ..+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++....
T Consensus 77 ~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~ 149 (318)
T cd05582 77 LDFLRGGDLFTRLSKE----VMFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESI 149 (318)
T ss_pred EcCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHeEECCCCcEEEeeccCCcccC
Confidence 9999999999998643 35899999999999999999999 8999999999999999999999999999987543
Q ss_pred cccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchhhhh
Q 011508 322 EAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPERLAE 401 (484)
Q Consensus 322 ~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (484)
... .......|+..|+|||.+.+..++.++|||||||++|||++|+.||..... ..... .
T Consensus 150 ~~~-------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~-----~~~~~--------~ 209 (318)
T cd05582 150 DHE-------KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDR-----KETMT--------M 209 (318)
T ss_pred CCC-------CceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCH-----HHHHH--------H
Confidence 221 112235689999999999888899999999999999999999999965311 11111 1
Q ss_pred hcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHH
Q 011508 402 IVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEE 458 (484)
Q Consensus 402 ~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~e 458 (484)
+....... +..+...+.+++..||+.||++||++.+
T Consensus 210 i~~~~~~~---------------------p~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 210 ILKAKLGM---------------------PQFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred HHcCCCCC---------------------CCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 11000000 1122456889999999999999999554
No 188
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=5.4e-39 Score=302.78 Aligned_cols=242 Identities=23% Similarity=0.342 Sum_probs=185.0
Q ss_pred ccccccceeEEEEEEcC----------------------CCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeE
Q 011508 166 LIGAGSFGSVYKGIFDH----------------------DDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKI 223 (484)
Q Consensus 166 ~lg~G~~g~Vy~~~~~~----------------------~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~ 223 (484)
.||+|+||.||+|.+.. ......|++|++..........+.+|+.+++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 69999999999998532 12235689999876544445678899999999999999999
Q ss_pred eeeeeeeccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeee
Q 011508 224 ITSCVSVDFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLL 303 (484)
Q Consensus 224 ~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll 303 (484)
+++|... ...++||||+++|+|..++... ...+++..+..++.|+++||+||| +++|+||||||+||++
T Consensus 82 ~~~~~~~-----~~~~lv~ey~~~g~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH---~~~iiH~dlkp~Nill 150 (274)
T cd05076 82 HGVCVRG-----SENIMVEEFVEHGPLDVCLRKE---KGRVPVAWKITVAQQLASALSYLE---DKNLVHGNVCAKNILL 150 (274)
T ss_pred EEEEEeC-----CceEEEEecCCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHH---cCCccCCCCCcccEEE
Confidence 9997543 3779999999999999998642 235889999999999999999999 8999999999999999
Q ss_pred cCCC-------ceEEcccCcccccccccccCCCCccccccccccccccCccccCC-CCCCcccceehhhHHHHHHH-hCC
Q 011508 304 DGEL-------TAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-SEVSTSGDVYSFGILLLEMF-TGK 374 (484)
Q Consensus 304 ~~~~-------~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~ell-tg~ 374 (484)
+..+ .+|++|||.+...... ....++..|+|||.+.+ ..++.++|||||||++||++ +|+
T Consensus 151 ~~~~~~~~~~~~~kl~d~g~~~~~~~~-----------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~ 219 (274)
T cd05076 151 ARLGLAEGTSPFIKLSDPGVSFTALSR-----------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGE 219 (274)
T ss_pred eccCcccCccceeeecCCccccccccc-----------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence 7643 3799999987643211 11246788999998765 56899999999999999995 699
Q ss_pred CCCCCCccCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCC
Q 011508 375 GPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERM 454 (484)
Q Consensus 375 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP 454 (484)
.||....... ...+. +..... +......+.+++.+||+.+|++||
T Consensus 220 ~p~~~~~~~~--~~~~~------------~~~~~~---------------------~~~~~~~~~~li~~cl~~~p~~Rp 264 (274)
T cd05076 220 VPLKERTPSE--KERFY------------EKKHRL---------------------PEPSCKELATLISQCLTYEPTQRP 264 (274)
T ss_pred CCccccChHH--HHHHH------------HhccCC---------------------CCCCChHHHHHHHHHcccChhhCc
Confidence 9986532111 00110 000000 000134688999999999999999
Q ss_pred CHHHHHHHHH
Q 011508 455 NMEEVAAQLL 464 (484)
Q Consensus 455 t~~evl~~L~ 464 (484)
|+.+|++.|+
T Consensus 265 s~~~il~~L~ 274 (274)
T cd05076 265 SFRTILRDLT 274 (274)
T ss_pred CHHHHHHhhC
Confidence 9999998873
No 189
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=1e-38 Score=298.00 Aligned_cols=250 Identities=33% Similarity=0.469 Sum_probs=199.9
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
.++|++.+.||.|+||.||+|... ++.||+|.++.... ..+++.+|+.+++.++|+|++++++++. ....
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~----~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~ 74 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR----GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVL-----QGNP 74 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec----CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEc-----CCCC
Confidence 356888999999999999999854 57799999976544 4578899999999999999999999853 3457
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
.++||||+++++|.+++.... ...+++..++.++.|++.||.||| .++++|+||||+||+++.++.+||+|||.+
T Consensus 75 ~~~v~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lh---~~~i~H~di~p~Nili~~~~~~~l~d~g~~ 149 (256)
T cd05039 75 LYIVTEYMAKGSLVDYLRSRG--RAVITLAQQLGFALDVCEGMEYLE---EKNFVHRDLAARNVLVSEDLVAKVSDFGLA 149 (256)
T ss_pred eEEEEEecCCCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHH---hCCccchhcccceEEEeCCCCEEEcccccc
Confidence 899999999999999997433 235899999999999999999999 899999999999999999999999999999
Q ss_pred cccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhhcc
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEALP 396 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 396 (484)
+....... ....+..|+|||.+....++.++||||||+++||+++ |+.||...... .+...+..
T Consensus 150 ~~~~~~~~----------~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~~~~--- 214 (256)
T cd05039 150 KEASQGQD----------SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--DVVPHVEK--- 214 (256)
T ss_pred cccccccc----------cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHhc---
Confidence 86632210 1234567999999988889999999999999999997 99998643111 01000000
Q ss_pred hhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHH
Q 011508 397 ERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLS 465 (484)
Q Consensus 397 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 465 (484)
.... ..+..++..+.+++.+||+.+|++|||+.|++++|+.
T Consensus 215 ---------~~~~-------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 215 ---------GYRM-------------------EAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred ---------CCCC-------------------CCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence 0000 0012235678999999999999999999999999975
No 190
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.9e-39 Score=318.21 Aligned_cols=281 Identities=19% Similarity=0.185 Sum_probs=198.8
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
..+|.+.+.||+|+||.||++...+...+..||+|.+... ....+|++++++++||||+++++++ .....
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~-----~~~~~ 160 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAY-----RWKST 160 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeE-----eeCCE
Confidence 4579999999999999999998666566788999987643 3456899999999999999999885 34458
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
.++|||++ .++|.+++.. ...+++..++.++.||+.||+||| +++|+||||||+|||++.++.++|+|||++
T Consensus 161 ~~lv~e~~-~~~l~~~l~~----~~~l~~~~~~~i~~ql~~aL~~LH---~~givHrDlkp~Nill~~~~~~~l~DfG~a 232 (392)
T PHA03207 161 VCMVMPKY-KCDLFTYVDR----SGPLPLEQAITIQRRLLEALAYLH---GRGIIHRDVKTENIFLDEPENAVLGDFGAA 232 (392)
T ss_pred EEEEehhc-CCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEcCCCCEEEccCccc
Confidence 89999999 5789888842 245899999999999999999999 899999999999999999999999999999
Q ss_pred cccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCC--ccHhHHHHhhc
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGN--LTLHNFVKEAL 395 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~--~~~~~~~~~~~ 395 (484)
........ ........||..|+|||++.+..++.++|||||||++|||++|+.||....... ..+........
T Consensus 233 ~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~ 307 (392)
T PHA03207 233 CKLDAHPD-----TPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQ 307 (392)
T ss_pred cccCcccc-----cccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhc
Confidence 76543221 111224568999999999999999999999999999999999999997643221 11111111100
Q ss_pred chhh--hhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 396 PERL--AEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 396 ~~~~--~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
.... ..-....+.............. ...............+.+++..||..||++|||+.|++..
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 308 VHPLEFPQNGSTNLCKHFKQYAIVLRPP-YTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred cCccccCCccchhHHHHHHhhcccccCC-ccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0000 0000000000000000000000 0000000011124567889999999999999999999875
No 191
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=2.2e-38 Score=296.59 Aligned_cols=254 Identities=29% Similarity=0.468 Sum_probs=200.5
Q ss_pred CccccccceeEEEEEEcCC-CCeeEEEEEEeeccCccc-hHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCceeeEEe
Q 011508 165 NLIGAGSFGSVYKGIFDHD-DHETLVAVKVLNLQHRGA-SKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFEALVY 242 (484)
Q Consensus 165 ~~lg~G~~g~Vy~~~~~~~-~~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 242 (484)
+.||+|+||.||+|..... ..+..|++|.++...... .+.+.+|++.+..++|+|++++++++.. ....++||
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~~~lv~ 75 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTE-----EEPLYLVL 75 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecC-----CCceEEEE
Confidence 4699999999999997543 336789999997654433 5788999999999999999999998643 55889999
Q ss_pred ecccCCCHHHHHhhcCCC-----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 243 ELMVNGSLEEWLHLNRDA-----PRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 243 e~~~~gsL~~~l~~~~~~-----~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
||+++++|.+++...... ...+++..++.++.|++.||+||| +++++||||+|+||+++.++.+||+|||.+
T Consensus 76 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~di~p~nili~~~~~~~l~dfg~~ 152 (262)
T cd00192 76 EYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLA---SKKFVHRDLAARNCLVGEDLVVKISDFGLS 152 (262)
T ss_pred EeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHH---cCCcccCccCcceEEECCCCcEEEcccccc
Confidence 999999999999854211 356899999999999999999999 899999999999999999999999999999
Q ss_pred cccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhhcc
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEALP 396 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 396 (484)
........ ........++..|+|||.+....++.++||||+|+++|||++ |..||..... .....
T Consensus 153 ~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-----~~~~~---- 218 (262)
T cd00192 153 RDVYDDDY-----YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN-----EEVLE---- 218 (262)
T ss_pred cccccccc-----cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH-----HHHHH----
Confidence 87644321 111223457889999999888889999999999999999999 6999876411 11111
Q ss_pred hhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHH
Q 011508 397 ERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLL 464 (484)
Q Consensus 397 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 464 (484)
.+.+.... ..+..++.++.+++.+|++.+|++|||+.|+++.|+
T Consensus 219 ----~~~~~~~~--------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 219 ----YLRKGYRL--------------------PKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred ----HHHcCCCC--------------------CCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 01100000 002223567899999999999999999999998873
No 192
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.9e-38 Score=301.28 Aligned_cols=265 Identities=23% Similarity=0.266 Sum_probs=201.4
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
++|+..+.||.|++|.||+|... .+++.+|+|.+..... .....+.+|++++++++||||+++++++... ....
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~---~~~~ 75 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLK--NTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDE---SSSS 75 (287)
T ss_pred CceEEEEEeccCCceEEEEEEEC--CCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEcc---CCCe
Confidence 46788899999999999999954 3578899999875433 3346789999999999999999999987532 3446
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
.++||||+++++|.+++.........+++..+..++.|++.||+||| ..+++|+||+|+||+++.++.++|+|||++
T Consensus 76 ~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH---~~~i~H~dl~~~nil~~~~~~~~l~dfg~~ 152 (287)
T cd06621 76 IGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLH---SRKIIHRDIKPSNILLTRKGQVKLCDFGVS 152 (287)
T ss_pred EEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEecCCeEEEeecccc
Confidence 79999999999999988754444456889999999999999999999 899999999999999999999999999998
Q ss_pred cccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcch
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPE 397 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 397 (484)
....... .....++..|+|||.+.+..++.++||||+||++|+|++|+.||...........+......
T Consensus 153 ~~~~~~~---------~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-- 221 (287)
T cd06621 153 GELVNSL---------AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIV-- 221 (287)
T ss_pred ccccccc---------cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHh--
Confidence 7542211 11234778899999998889999999999999999999999999754221111111111000
Q ss_pred hhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 398 RLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 398 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
..-.+.+...... .......+.+++..||+.+|++|||+.||++.
T Consensus 222 ---~~~~~~~~~~~~~-----------------~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~ 266 (287)
T cd06621 222 ---NMPNPELKDEPGN-----------------GIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEH 266 (287)
T ss_pred ---cCCchhhccCCCC-----------------CCchHHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence 0000000000000 01124578899999999999999999999874
No 193
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=8.6e-39 Score=313.75 Aligned_cols=206 Identities=23% Similarity=0.328 Sum_probs=171.6
Q ss_pred hHHHhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcCCCCCceeEeeeeee
Q 011508 153 NLFKATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSIRHRNLVKIITSCVS 229 (484)
Q Consensus 153 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~ 229 (484)
++....++|++.+.||+|+||.||+++. ..+++.+|+|++.... ......+.+|+.+++.++||||+++++.+
T Consensus 37 ~~~~~~~~y~i~~~lG~G~fg~Vy~~~~--~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~-- 112 (371)
T cd05622 37 DLRMKAEDYEVVKVIGRGAFGEVQLVRH--KSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAF-- 112 (371)
T ss_pred hcCcchhhcEEEEEEeecCCeEEEEEEE--CCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEE--
Confidence 3445568999999999999999999984 4467889999986422 22334577899999999999999999885
Q ss_pred eccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCce
Q 011508 230 VDFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTA 309 (484)
Q Consensus 230 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~ 309 (484)
..+...++||||+++|+|.+++... .+++..+..++.||+.||+||| +++|+||||||+||+++.++.+
T Consensus 113 ---~~~~~~~lv~Ey~~gg~L~~~~~~~-----~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NIll~~~~~i 181 (371)
T cd05622 113 ---QDDRYLYMVMEYMPGGDLVNLMSNY-----DVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHL 181 (371)
T ss_pred ---EcCCEEEEEEcCCCCCcHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHH---HCCEEeCCCCHHHEEECCCCCE
Confidence 4455899999999999999998632 3788889999999999999999 8999999999999999999999
Q ss_pred EEcccCcccccccccccCCCCccccccccccccccCccccCCC----CCCcccceehhhHHHHHHHhCCCCCCC
Q 011508 310 HVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGS----EVSTSGDVYSFGILLLEMFTGKGPTNE 379 (484)
Q Consensus 310 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~----~~~~~~Dvws~Gvvl~elltg~~p~~~ 379 (484)
||+|||++....... ........||+.|+|||++... .++.++|||||||++|||++|+.||..
T Consensus 182 kL~DfG~a~~~~~~~------~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~ 249 (371)
T cd05622 182 KLADFGTCMKMNKEG------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 249 (371)
T ss_pred EEEeCCceeEcCcCC------cccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCC
Confidence 999999998653221 1111235699999999988653 378999999999999999999999975
No 194
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=1.3e-38 Score=299.51 Aligned_cols=258 Identities=24% Similarity=0.311 Sum_probs=196.4
Q ss_pred HHhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCC
Q 011508 155 FKATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQG 234 (484)
Q Consensus 155 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 234 (484)
+.+++++.....||+|+||.||+|+.. .++..||+|.+........+.+.+|+.++++++|+||+++++++. .
T Consensus 4 ~~~~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~ 76 (268)
T cd06624 4 EYEYDENGERVVLGKGTYGIVYAARDL--STQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDS-----E 76 (268)
T ss_pred ccccccCCceEEEecCCceEEEEeEec--CCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeec-----c
Confidence 345666667789999999999999854 356789999987665555678999999999999999999999864 3
Q ss_pred CceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecC-CCceEEcc
Q 011508 235 NDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDG-ELTAHVSD 313 (484)
Q Consensus 235 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~-~~~~kl~D 313 (484)
++..++|+||+++++|.+++..... ....++..+..++.|++.||+||| +++|+||||||+||+++. ++.++|+|
T Consensus 77 ~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~qi~~al~~lH---~~~i~h~dl~p~nil~~~~~~~~~l~d 152 (268)
T cd06624 77 NGFFKIFMEQVPGGSLSALLRSKWG-PLKDNEQTIIFYTKQILEGLKYLH---DNQIVHRDIKGDNVLVNTYSGVVKISD 152 (268)
T ss_pred CCEEEEEEecCCCCCHHHHHHHhcc-cCCCcHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCeEEEec
Confidence 4588999999999999999974321 111278888999999999999999 899999999999999976 67999999
Q ss_pred cCcccccccccccCCCCccccccccccccccCccccCCC--CCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHH
Q 011508 314 FGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGS--EVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFV 391 (484)
Q Consensus 314 fg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~--~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 391 (484)
||.+....... .......++..|+|||++... .++.++||||||+++|+|++|+.||......... .+.
T Consensus 153 fg~~~~~~~~~-------~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~--~~~ 223 (268)
T cd06624 153 FGTSKRLAGIN-------PCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAA--MFK 223 (268)
T ss_pred chhheecccCC-------CccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhh--Hhh
Confidence 99987653211 111223478899999987654 3788999999999999999999998643211100 000
Q ss_pred HhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 392 KEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 392 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
.. ... ..+. .+..+..++.+++.+||+.+|++|||+.|+++
T Consensus 224 ~~-----~~~-~~~~-----------------------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 224 VG-----MFK-IHPE-----------------------IPESLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred hh-----hhc-cCCC-----------------------CCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 00 000 0000 01223557889999999999999999999976
No 195
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=6.5e-39 Score=307.84 Aligned_cols=275 Identities=21% Similarity=0.289 Sum_probs=195.7
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
++|.+.+.||+|+||.||+|+. ..++..||+|.++.... .....+.+|++++++++||||+++++++. .++.
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~--~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~ 78 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRS--KLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVH-----TDKS 78 (309)
T ss_pred CceEEEEEecccCCEEEEEEEe--cCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEe-----eCCe
Confidence 6789999999999999999984 34567899999875432 23356788999999999999999999854 3457
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
.++||||++ ++|.+++... ...+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||++
T Consensus 79 ~~lv~e~~~-~~l~~~~~~~---~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~ 151 (309)
T cd07872 79 LTLVFEYLD-KDLKQYMDDC---GNIMSMHNVKIFLYQILRGLAYCH---RRKVLHRDLKPQNLLINERGELKLADFGLA 151 (309)
T ss_pred EEEEEeCCC-CCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECccccc
Confidence 899999996 5888887643 234788999999999999999999 899999999999999999999999999998
Q ss_pred cccccccccCCCCccccccccccccccCccccCC-CCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhh--
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEA-- 394 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~-- 394 (484)
....... .......++..|+|||.+.+ ..++.++|||||||++|||+||+.||....... .+.......
T Consensus 152 ~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~-~~~~~~~~~~~ 223 (309)
T cd07872 152 RAKSVPT-------KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVED-ELHLIFRLLGT 223 (309)
T ss_pred eecCCCc-------cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCC
Confidence 7542211 11122357889999998765 568899999999999999999999997542211 111111100
Q ss_pred -cchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 395 -LPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 395 -~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
.++....+.+..-.............. .. ....+..++.+++.+|++.||.+|||+.|+++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 224 PTEETWPGISSNDEFKNYNFPKYKPQPL-IN-----HAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred CCHHHHhhhcchhhhhhhhcCccCCCch-hh-----hccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 000011111000000000000000000 00 01123557889999999999999999999986
No 196
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=1.4e-38 Score=297.76 Aligned_cols=253 Identities=28% Similarity=0.470 Sum_probs=197.2
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCcee
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFE 238 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 238 (484)
++|.+...||+|++|.||+|.+.. ...+|+|.+.... ...+.+.+|++++++++|+|++++++++. ....
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~---~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~------~~~~ 75 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNG---TTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS------EEPI 75 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcC---CceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc------CCCc
Confidence 568888999999999999998653 3458999876443 23467889999999999999999988742 2357
Q ss_pred eEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccc
Q 011508 239 ALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAK 318 (484)
Q Consensus 239 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~ 318 (484)
++||||+++++|.++++... ...+++..+..++.|++.||+||| +.+++|+||||+||++++++.++|+|||.+.
T Consensus 76 ~~v~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~ 150 (260)
T cd05069 76 YIVTEFMGKGSLLDFLKEGD--GKYLKLPQLVDMAAQIADGMAYIE---RMNYIHRDLRAANILVGDNLVCKIADFGLAR 150 (260)
T ss_pred EEEEEcCCCCCHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccCcceEEEcCCCeEEECCCccce
Confidence 89999999999999997532 345789999999999999999999 8999999999999999999999999999997
Q ss_pred ccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhhcch
Q 011508 319 FLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEALPE 397 (484)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 397 (484)
....... .......++..|+|||...+..++.++||||||+++|||+| |+.||...... .........
T Consensus 151 ~~~~~~~------~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~~~~~--- 219 (260)
T cd05069 151 LIEDNEY------TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNR--EVLEQVERG--- 219 (260)
T ss_pred EccCCcc------cccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcC---
Confidence 6532211 11112235678999999988889999999999999999999 89998653211 010110000
Q ss_pred hhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHH
Q 011508 398 RLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLS 465 (484)
Q Consensus 398 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 465 (484)
.... .+...+..+.+++.+||+.||++||++++|++.|++
T Consensus 220 -----~~~~-----------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 220 -----YRMP-----------------------CPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred -----CCCC-----------------------CCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 0000 011225678999999999999999999999999875
No 197
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=1.7e-38 Score=301.88 Aligned_cols=262 Identities=26% Similarity=0.431 Sum_probs=200.9
Q ss_pred cCCCCccCccccccceeEEEEEEcC---CCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccC
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDH---DDHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQ 233 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~---~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 233 (484)
.++|++.+.||+|+||.||+|.... ..++..||+|++..... .....+.+|+.++++++|||++++++++.
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~----- 78 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCA----- 78 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEc-----
Confidence 4678999999999999999998642 23567899999875433 22356889999999999999999999854
Q ss_pred CCceeeEEeecccCCCHHHHHhhcCC------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecC
Q 011508 234 GNDFEALVYELMVNGSLEEWLHLNRD------------------APRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCD 295 (484)
Q Consensus 234 ~~~~~~lv~e~~~~gsL~~~l~~~~~------------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~d 295 (484)
.+...++||||+++|+|.+++..... ....+++..++.++.|++.||+||| .++++|||
T Consensus 79 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH---~~~i~H~d 155 (288)
T cd05050 79 VGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLS---ERKFVHRD 155 (288)
T ss_pred CCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCeeccc
Confidence 34478999999999999999974321 1234788999999999999999999 89999999
Q ss_pred CCCCCeeecCCCceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CC
Q 011508 296 LKPSNVLLDGELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GK 374 (484)
Q Consensus 296 lk~~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~ 374 (484)
|||+||++++++.++|+|||.+........ .........+..|+|||...+..++.++|||||||++|||++ |.
T Consensus 156 l~p~nil~~~~~~~~l~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~ 230 (288)
T cd05050 156 LATRNCLVGENMVVKIADFGLSRNIYSADY-----YKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGM 230 (288)
T ss_pred ccHhheEecCCCceEECccccceecccCcc-----ccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCC
Confidence 999999999999999999999875532211 011112234667999999888899999999999999999998 88
Q ss_pred CCCCCCccCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCC
Q 011508 375 GPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERM 454 (484)
Q Consensus 375 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP 454 (484)
.||..... .+.... +.+..... .+..++.++.+++.+|++.+|++||
T Consensus 231 ~p~~~~~~-----~~~~~~--------~~~~~~~~--------------------~~~~~~~~l~~li~~~l~~~p~~Rp 277 (288)
T cd05050 231 QPYYGMAH-----EEVIYY--------VRDGNVLS--------------------CPDNCPLELYNLMRLCWSKLPSDRP 277 (288)
T ss_pred CCCCCCCH-----HHHHHH--------HhcCCCCC--------------------CCCCCCHHHHHHHHHHcccCcccCC
Confidence 88864311 111111 10100000 0112356789999999999999999
Q ss_pred CHHHHHHHHHH
Q 011508 455 NMEEVAAQLLS 465 (484)
Q Consensus 455 t~~evl~~L~~ 465 (484)
|+.|+++.|++
T Consensus 278 t~~el~~~l~~ 288 (288)
T cd05050 278 SFASINRILQR 288 (288)
T ss_pred CHHHHHHHhhC
Confidence 99999999863
No 198
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=1.2e-38 Score=301.58 Aligned_cols=261 Identities=25% Similarity=0.417 Sum_probs=203.1
Q ss_pred CCCCccCccccccceeEEEEEEcCCCC--eeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDH--ETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~--~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
.+|++.+.||+|+||.||+|.+...+. ...+|+|.+..... .....+.+|+.++++++|+|+++++++|..
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------ 80 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS------ 80 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec------
Confidence 567888999999999999998754332 34689998875543 234678899999999999999999998753
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
...++||||+++|+|.+++.... ..+++..++.++.|++.||+||| +.+++||||||+||+++.++.+||+|||
T Consensus 81 ~~~~~v~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~di~p~nil~~~~~~~kL~dfg 154 (279)
T cd05057 81 SQVQLITQLMPLGCLLDYVRNHK---DNIGSQYLLNWCVQIAKGMSYLE---EKRLVHRDLAARNVLVKTPQHVKITDFG 154 (279)
T ss_pred CceEEEEecCCCCcHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHH---hCCEEecccCcceEEEcCCCeEEECCCc
Confidence 36789999999999999997433 34899999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhh
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEA 394 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~ 394 (484)
.++......... ......++..|+|||......++.++||||||+++||+++ |+.||...... .+.+.+..
T Consensus 155 ~~~~~~~~~~~~-----~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~- 226 (279)
T cd05057 155 LAKLLDVDEKEY-----HAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAV--EIPDLLEK- 226 (279)
T ss_pred ccccccCcccce-----ecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHH--HHHHHHhC-
Confidence 998764322111 0111224578999999888889999999999999999999 99998653211 11111110
Q ss_pred cchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHHH
Q 011508 395 LPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRNK 469 (484)
Q Consensus 395 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~ 469 (484)
..... .+..+...+.+++.+||..+|++||++.++++.|+++...
T Consensus 227 ----------~~~~~--------------------~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05057 227 ----------GERLP--------------------QPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARD 271 (279)
T ss_pred ----------CCCCC--------------------CCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhC
Confidence 00000 0112245688999999999999999999999999988543
No 199
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=2e-38 Score=296.99 Aligned_cols=242 Identities=23% Similarity=0.367 Sum_probs=185.7
Q ss_pred CccccccceeEEEEEEcCCC----------CeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCC
Q 011508 165 NLIGAGSFGSVYKGIFDHDD----------HETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQG 234 (484)
Q Consensus 165 ~~lg~G~~g~Vy~~~~~~~~----------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 234 (484)
+.||+|+||.||+|++..+. ....|++|.+..........+.+|+.+++.++||||+++++++..
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~----- 75 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVR----- 75 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEec-----
Confidence 46899999999999864321 234689998876555555678899999999999999999998643
Q ss_pred CceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCc------
Q 011508 235 NDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELT------ 308 (484)
Q Consensus 235 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~------ 308 (484)
+...++||||+++++|..++... ...+++..++.++.||+.||+||| +++|+||||||+||+++.++.
T Consensus 76 ~~~~~lv~e~~~~~~l~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~~~~~~ 149 (262)
T cd05077 76 DVENIMVEEFVEFGPLDLFMHRK---SDVLTTPWKFKVAKQLASALSYLE---DKDLVHGNVCTKNILLAREGIDGECGP 149 (262)
T ss_pred CCCCEEEEecccCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHhh---hCCeECCCCCcccEEEecCCccCCCCc
Confidence 34678999999999999988643 235899999999999999999999 899999999999999987654
Q ss_pred -eEEcccCcccccccccccCCCCccccccccccccccCccccC-CCCCCcccceehhhHHHHHHH-hCCCCCCCCccCCc
Q 011508 309 -AHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGM-GSEVSTSGDVYSFGILLLEMF-TGKGPTNEMFTGNL 385 (484)
Q Consensus 309 -~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~~Dvws~Gvvl~ell-tg~~p~~~~~~~~~ 385 (484)
++++|||.+...... ....++..|+|||.+. +..++.++|||||||++|||+ +|..||......
T Consensus 150 ~~~l~d~g~~~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~-- 216 (262)
T cd05077 150 FIKLSDPGIPITVLSR-----------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLA-- 216 (262)
T ss_pred eeEeCCCCCCccccCc-----------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchh--
Confidence 899999988654211 1234778899999876 467899999999999999998 488887542110
Q ss_pred cHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHH
Q 011508 386 TLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQL 463 (484)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 463 (484)
... ......... ......++.+++.+||+.||.+||++.+|++.+
T Consensus 217 ---~~~---------~~~~~~~~~---------------------~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 217 ---EKE---------RFYEGQCML---------------------VTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred ---HHH---------HHHhcCccC---------------------CCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 000 000000000 000145688999999999999999999999876
No 200
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=1.5e-38 Score=307.64 Aligned_cols=206 Identities=20% Similarity=0.237 Sum_probs=163.7
Q ss_pred ccCccccc--cceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCcee
Q 011508 163 LENLIGAG--SFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFE 238 (484)
Q Consensus 163 ~~~~lg~G--~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 238 (484)
+.++||+| +|++||+++ +..++..||+|+++.... ...+.+.+|+++++.++||||+++++++.. ++..
T Consensus 2 ~~~~ig~G~~~~~~v~~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~-----~~~~ 74 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLAR--YKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIA-----DNEL 74 (327)
T ss_pred hhhhccccccceEEEEEEe--ecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEE-----CCEE
Confidence 45789999 788999998 445678999999875432 233567789999999999999999998643 4478
Q ss_pred eEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccc
Q 011508 239 ALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAK 318 (484)
Q Consensus 239 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~ 318 (484)
++||||+++|+|.+++.... ...+++..++.++.|++.||+||| +++|+||||||+||+++.++.++++||+...
T Consensus 75 ~lv~e~~~~~~l~~~~~~~~--~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~ 149 (327)
T cd08227 75 WVVTSFMAYGSAKDLICTHF--MDGMSELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNL 149 (327)
T ss_pred EEEEeccCCCcHHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCChhhEEEecCCcEEEcccchhh
Confidence 99999999999999996432 234889999999999999999999 8999999999999999999999999998754
Q ss_pred ccccccccCCCCccccccccccccccCccccCC--CCCCcccceehhhHHHHHHHhCCCCCCCC
Q 011508 319 FLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG--SEVSTSGDVYSFGILLLEMFTGKGPTNEM 380 (484)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~~Dvws~Gvvl~elltg~~p~~~~ 380 (484)
....................++..|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 213 (327)
T cd08227 150 SMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDM 213 (327)
T ss_pred ccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCc
Confidence 432211100000011122346788999999875 45899999999999999999999999754
No 201
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=5.6e-39 Score=315.33 Aligned_cols=204 Identities=24% Similarity=0.291 Sum_probs=168.6
Q ss_pred hcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC--ccchHHHHHHHHHHHcCCCCCceeEeeeeeeec-cC
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH--RGASKSFIAECQALRSIRHRNLVKIITSCVSVD-FQ 233 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~ 233 (484)
..++|.+.+.||+|+||.||+|.. ...++.||||++.... ......+.+|+.+++.++||||+++++++.... +.
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~--~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~ 99 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYD--AILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLE 99 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEE--CCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccc
Confidence 457899999999999999999984 4457789999987532 233457889999999999999999998764322 12
Q ss_pred CCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcc
Q 011508 234 GNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSD 313 (484)
Q Consensus 234 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~D 313 (484)
.....++||||++ ++|.+++.. .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|
T Consensus 100 ~~~~~~lv~e~~~-~~l~~~~~~------~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~D 169 (364)
T cd07875 100 EFQDVYIVMELMD-ANLCQVIQM------ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILD 169 (364)
T ss_pred ccCeEEEEEeCCC-CCHHHHHHh------cCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEECCCCcEEEEe
Confidence 3346799999995 578777742 3788899999999999999999 89999999999999999999999999
Q ss_pred cCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCC
Q 011508 314 FGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEM 380 (484)
Q Consensus 314 fg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~ 380 (484)
||+++...... ......+|..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 170 fG~a~~~~~~~--------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 228 (364)
T cd07875 170 FGLARTAGTSF--------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228 (364)
T ss_pred CCCccccCCCC--------cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCC
Confidence 99997653211 112346899999999999999999999999999999999999999753
No 202
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=3.9e-39 Score=311.40 Aligned_cols=242 Identities=28% Similarity=0.313 Sum_probs=184.5
Q ss_pred CccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHH-HHHHcCCCCCceeEeeeeeeeccCCCceeeE
Q 011508 165 NLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAEC-QALRSIRHRNLVKIITSCVSVDFQGNDFEAL 240 (484)
Q Consensus 165 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~-~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 240 (484)
+.||+|+||.||+|+.. .++..||+|++.... ......+..|. .+++.++|+||+++++++ ..++..++
T Consensus 1 ~~lg~G~fg~V~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~-----~~~~~~~l 73 (325)
T cd05602 1 KVIGKGSFGKVLLARHK--AEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSF-----QTADKLYF 73 (325)
T ss_pred CeeeeCCCeEEEEEEEC--CCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEE-----EcCCeEEE
Confidence 46999999999999844 456789999987532 11223444444 356788999999999885 34558899
Q ss_pred EeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccccc
Q 011508 241 VYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFL 320 (484)
Q Consensus 241 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~ 320 (484)
||||+++|+|.+++... ..+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++..
T Consensus 74 v~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~qi~~~L~~lH---~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~ 146 (325)
T cd05602 74 VLDYINGGELFYHLQRE----RCFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKEN 146 (325)
T ss_pred EEeCCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEEccCCCCccc
Confidence 99999999999998743 34778888899999999999999 899999999999999999999999999998753
Q ss_pred ccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchhhh
Q 011508 321 PEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPERLA 400 (484)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 400 (484)
.... .......||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......
T Consensus 147 ~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----~~~~~~------- 207 (325)
T cd05602 147 IEHN-------GTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT-----AEMYDN------- 207 (325)
T ss_pred ccCC-------CCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCH-----HHHHHH-------
Confidence 2211 112235689999999999999999999999999999999999999965321 111111
Q ss_pred hhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 401 EIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 401 ~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
+....... .......+.+++.+|++.||.+||++.+.+.
T Consensus 208 -i~~~~~~~---------------------~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~ 246 (325)
T cd05602 208 -ILNKPLQL---------------------KPNITNSARHLLEGLLQKDRTKRLGAKDDFM 246 (325)
T ss_pred -HHhCCcCC---------------------CCCCCHHHHHHHHHHcccCHHHCCCCCCCHH
Confidence 11100000 1112556889999999999999999875443
No 203
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=1.3e-38 Score=301.75 Aligned_cols=251 Identities=23% Similarity=0.319 Sum_probs=194.6
Q ss_pred CCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCceeeE
Q 011508 161 FSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFEAL 240 (484)
Q Consensus 161 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 240 (484)
|++.+.||+|+||.||+|... .++..+++|.+........+.+.+|+++++.++|+|++++++++.. +...++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~--~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~-----~~~~~~ 79 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNK--ETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYY-----ENNLWI 79 (282)
T ss_pred HHHHhhcccCCCeEEEEEEEC--CCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEee-----CCEEEE
Confidence 567789999999999999844 4567899999876555556778899999999999999999998643 347899
Q ss_pred EeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccccc
Q 011508 241 VYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFL 320 (484)
Q Consensus 241 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~ 320 (484)
|+||+++++|..++... ...+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||++...
T Consensus 80 v~e~~~~~~l~~~~~~~---~~~l~~~~~~~~~~qi~~~L~~LH---~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~ 153 (282)
T cd06643 80 LIEFCAGGAVDAVMLEL---ERPLTEPQIRVVCKQTLEALNYLH---ENKIIHRDLKAGNILFTLDGDIKLADFGVSAKN 153 (282)
T ss_pred EEEecCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEccCCCEEEccccccccc
Confidence 99999999999987632 235899999999999999999999 899999999999999999999999999998754
Q ss_pred ccccccCCCCccccccccccccccCccccC-----CCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhc
Q 011508 321 PEAANNLSSNQSSSVGVKGTVGYAAPEYGM-----GSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEAL 395 (484)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 395 (484)
.... .......++..|+|||++. +..++.++|||||||++|||++|+.||....... ......
T Consensus 154 ~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~-----~~~~~~ 221 (282)
T cd06643 154 TRTI-------QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMR-----VLLKIA 221 (282)
T ss_pred cccc-------cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHH-----HHHHHh
Confidence 3211 1112345889999999874 3457889999999999999999999986532110 000000
Q ss_pred chhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 396 PERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 396 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
.. ..+.+.. +..++.++.+++..||+.||.+||++.++++.
T Consensus 222 ~~-----~~~~~~~---------------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 262 (282)
T cd06643 222 KS-----EPPTLAQ---------------------PSRWSSEFKDFLKKCLEKNVDARWTTTQLLQH 262 (282)
T ss_pred hc-----CCCCCCC---------------------ccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00 0000000 11225578999999999999999999998754
No 204
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=2.9e-38 Score=297.23 Aligned_cols=257 Identities=25% Similarity=0.340 Sum_probs=187.4
Q ss_pred CccccccceeEEEEEEcCCCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCceeeEEee
Q 011508 165 NLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFEALVYE 243 (484)
Q Consensus 165 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 243 (484)
+.||+|+||.||+|..........+++|.+..... .....+.+|+..++.++|+||+++++.+. .....++|||
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~-----~~~~~~lv~e 75 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCI-----ESIPYLLVLE 75 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEEC-----CCCceEEEEE
Confidence 36999999999999865554566789998764432 22356889999999999999999999864 3447899999
Q ss_pred cccCCCHHHHHhhcCCC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccccccc
Q 011508 244 LMVNGSLEEWLHLNRDA-PRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFLPE 322 (484)
Q Consensus 244 ~~~~gsL~~~l~~~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~~~ 322 (484)
|+++|+|.+++...... ....++...+.++.|++.||+||| +++|+||||||+||++++++.+||+|||++.....
T Consensus 76 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~ 152 (269)
T cd05042 76 FCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLH---QADFIHSDLALRNCQLTADLSVKIGDYGLALEQYP 152 (269)
T ss_pred eCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHH---hcCEecccccHhheEecCCCcEEEecccccccccc
Confidence 99999999999765432 233567888899999999999999 89999999999999999999999999999865422
Q ss_pred ccccCCCCccccccccccccccCccccC-------CCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhh
Q 011508 323 AANNLSSNQSSSVGVKGTVGYAAPEYGM-------GSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEA 394 (484)
Q Consensus 323 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~-------~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~ 394 (484)
.... .......++..|+|||+.. ...++.++|||||||++|||++ |..||....... .+.....
T Consensus 153 ~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~-~~~~~~~-- 224 (269)
T cd05042 153 EDYY-----ITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQ-VLKQVVR-- 224 (269)
T ss_pred chhe-----eccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHH-HHHHHhh--
Confidence 2100 0112234567899999864 2456889999999999999999 788886432110 1111111
Q ss_pred cchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHH
Q 011508 395 LPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQL 463 (484)
Q Consensus 395 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 463 (484)
.....+.++.+ ...+...+.+++..|+ .||++|||++||++.|
T Consensus 225 --~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l 267 (269)
T cd05042 225 --EQDIKLPKPQL-----------------------DLKYSDRWYEVMQFCW-LDPETRPTAEEVHELL 267 (269)
T ss_pred --ccCccCCCCcc-----------------------cccCCHHHHHHHHHHh-cCcccccCHHHHHHHh
Confidence 00001111111 1122455677888888 5999999999999987
No 205
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=8.4e-39 Score=299.50 Aligned_cols=256 Identities=29% Similarity=0.484 Sum_probs=200.5
Q ss_pred hcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCc
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
..++|++.+.||+|+||.||+|... +...+|+|.+.... ...+.+.+|+.++++++|+|++++++++ ....
T Consensus 4 ~~~~~~i~~~ig~g~~~~v~~~~~~---~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~ 74 (261)
T cd05034 4 PRESLKLERKLGAGQFGEVWMGTWN---GTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVC-----SEEE 74 (261)
T ss_pred chhheeeeeeeccCcceEEEEEEEc---CCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeee-----ecCC
Confidence 3467899999999999999999854 34679999987543 3346789999999999999999999984 3345
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCc
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGL 316 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 316 (484)
..++||||+++++|.+++.... ...+++..+..++.|++.|++||| +++++|+||||+||++++++.+||+|||.
T Consensus 75 ~~~~v~e~~~~~~L~~~i~~~~--~~~~~~~~~~~~~~~i~~al~~lh---~~~i~h~di~p~nili~~~~~~~l~d~g~ 149 (261)
T cd05034 75 PIYIVTEYMSKGSLLDFLKSGE--GKKLRLPQLVDMAAQIAEGMAYLE---SRNYIHRDLAARNILVGENLVCKIADFGL 149 (261)
T ss_pred ceEEEEeccCCCCHHHHHhccc--cCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcchheEEEcCCCCEEECcccc
Confidence 7899999999999999997532 345899999999999999999999 89999999999999999999999999999
Q ss_pred ccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhhc
Q 011508 317 AKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEAL 395 (484)
Q Consensus 317 a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 395 (484)
+....... .........+..|+|||.+.+..++.++||||+|+++|++++ |+.||...... .....
T Consensus 150 ~~~~~~~~------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~-----~~~~~-- 216 (261)
T cd05034 150 ARLIEDDE------YTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNR-----EVLEQ-- 216 (261)
T ss_pred ceeccchh------hhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHH--
Confidence 88664321 011112234568999999988889999999999999999999 99998643111 01110
Q ss_pred chhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHH
Q 011508 396 PERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLS 465 (484)
Q Consensus 396 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 465 (484)
+.. .... ..+.+++..+.+++.+|++.+|++||+++++.+.|+.
T Consensus 217 ------~~~-~~~~-------------------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 217 ------VER-GYRM-------------------PRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred ------HHc-CCCC-------------------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 000 0000 0011225578999999999999999999999999875
No 206
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-39 Score=314.10 Aligned_cols=257 Identities=26% Similarity=0.382 Sum_probs=208.4
Q ss_pred CCccCccccccceeEEEEEEcCCC-CeeEEEEEEeeccCcc-chHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCcee
Q 011508 161 FSLENLIGAGSFGSVYKGIFDHDD-HETLVAVKVLNLQHRG-ASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFE 238 (484)
Q Consensus 161 ~~~~~~lg~G~~g~Vy~~~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 238 (484)
..+.++||+|.||.|++|.|..-. +...||||.++..... ...+|.+|+.+|.+|+|+|++++||...+ ...
T Consensus 112 i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~------qp~ 185 (1039)
T KOG0199|consen 112 IKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD------QPA 185 (1039)
T ss_pred HHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc------chh
Confidence 456689999999999999997532 2346999999866544 56799999999999999999999998543 357
Q ss_pred eEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccc
Q 011508 239 ALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAK 318 (484)
Q Consensus 239 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~ 318 (484)
.+|||.++.|+|.+.|+. .....+-......++.|||.|+.||. .+++|||||..+|+++-..-.+||+|||+.+
T Consensus 186 mMV~ELaplGSLldrLrk--a~~~~llv~~Lcdya~QiA~aM~YLe---skrlvHRDLAARNlllasprtVKI~DFGLmR 260 (1039)
T KOG0199|consen 186 MMVFELAPLGSLLDRLRK--AKKAILLVSRLCDYAMQIAKAMQYLE---SKRLVHRDLAARNLLLASPRTVKICDFGLMR 260 (1039)
T ss_pred hHHhhhcccchHHHHHhh--ccccceeHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhhhheecccceeeeeccccee
Confidence 899999999999999986 23445788888999999999999999 9999999999999999988899999999999
Q ss_pred ccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhhcch
Q 011508 319 FLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEALPE 397 (484)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 397 (484)
.+......... .....-.+.|+|||.+....++.++|||+|||++|||+| |+.||.+... .
T Consensus 261 aLg~ned~Yvm----~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g--------------~ 322 (1039)
T KOG0199|consen 261 ALGENEDMYVM----APQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRG--------------I 322 (1039)
T ss_pred ccCCCCcceEe----cCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCH--------------H
Confidence 88665433221 122345788999999999999999999999999999999 8999976311 1
Q ss_pred hhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHH
Q 011508 398 RLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLS 465 (484)
Q Consensus 398 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 465 (484)
.+.+.+|.. .+-..++.|+..+.+++..||..+|++|||+..+.+.+-.
T Consensus 323 qIL~~iD~~-------------------erLpRPk~csedIY~imk~cWah~paDRptFsair~~~~l 371 (1039)
T KOG0199|consen 323 QILKNIDAG-------------------ERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLVL 371 (1039)
T ss_pred HHHHhcccc-------------------ccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhHHH
Confidence 122222211 0111267889999999999999999999999999865533
No 207
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=5.1e-39 Score=300.67 Aligned_cols=253 Identities=31% Similarity=0.448 Sum_probs=195.4
Q ss_pred CCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchH--HHHHHHHHHHcCCCCCceeEeeeeeeeccCCCcee
Q 011508 161 FSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASK--SFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFE 238 (484)
Q Consensus 161 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~--~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 238 (484)
|++.+.||+|+||+||++... .++..+|+|++......... ...+|+.++++++||||+++++++.. ....
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~--~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~-----~~~~ 73 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNK--KNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQD-----DNYL 73 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEET--TTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEE-----SSEE
T ss_pred CEEeEEEEeCCCEEEEEEEEC--CCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccc-----cccc
Confidence 567889999999999999954 45678999999876543322 34569999999999999999998644 5588
Q ss_pred eEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccc
Q 011508 239 ALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAK 318 (484)
Q Consensus 239 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~ 318 (484)
++||||+++++|.+++... ..+++..++.++.|+++||++|| +.+++|+||||+||+++.++.++|+|||.+.
T Consensus 74 ~~v~~~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~L~~Lh---~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~ 146 (260)
T PF00069_consen 74 YIVMEYCPGGSLQDYLQKN----KPLSEEEILKIAYQILEALAYLH---SKGIVHRDIKPENILLDENGEVKLIDFGSSV 146 (260)
T ss_dssp EEEEEEETTEBHHHHHHHH----SSBBHHHHHHHHHHHHHHHHHHH---HTTEEESSBSGGGEEESTTSEEEESSGTTTE
T ss_pred ccccccccccccccccccc----ccccccccccccccccccccccc---ccccccccccccccccccccccccccccccc
Confidence 9999999999999999832 34899999999999999999999 8899999999999999999999999999987
Q ss_pred ccccccccCCCCccccccccccccccCccccC-CCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcch
Q 011508 319 FLPEAANNLSSNQSSSVGVKGTVGYAAPEYGM-GSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPE 397 (484)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 397 (484)
.... .........++..|+|||+.. +..++.++||||+|+++|+|++|..||..... .............
T Consensus 147 ~~~~-------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~--~~~~~~~~~~~~~ 217 (260)
T PF00069_consen 147 KLSE-------NNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNS--DDQLEIIEKILKR 217 (260)
T ss_dssp ESTS-------TTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSH--HHHHHHHHHHHHT
T ss_pred cccc-------cccccccccccccccccccccccccccccccccccccccccccccccccccccc--hhhhhhhhhcccc
Confidence 5411 112223456889999999988 78899999999999999999999999976410 0111111111100
Q ss_pred hhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 398 RLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 398 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
...... .. .......+.+++..||+.||++||++.|+++
T Consensus 218 ~~~~~~----~~---------------------~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 218 PLPSSS----QQ---------------------SREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp HHHHHT----TS---------------------HTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred cccccc----cc---------------------cchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 000000 00 0001367999999999999999999999975
No 208
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=2.9e-39 Score=312.34 Aligned_cols=243 Identities=28% Similarity=0.312 Sum_probs=185.7
Q ss_pred CccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHH-HHHcCCCCCceeEeeeeeeeccCCCceeeE
Q 011508 165 NLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQ-ALRSIRHRNLVKIITSCVSVDFQGNDFEAL 240 (484)
Q Consensus 165 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 240 (484)
+.||+|+||.||+|+. ..+++.||+|++.... ......+..|.. +++.++||||+++++++ ..++..++
T Consensus 1 ~~lG~G~~g~V~~~~~--~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~-----~~~~~~~l 73 (325)
T cd05604 1 KVIGKGSFGKVLLAKR--KLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSF-----QTTEKLYF 73 (325)
T ss_pred CceeeCCCeEEEEEEE--CCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEE-----ecCCEEEE
Confidence 4699999999999984 4457889999987542 122344555554 46778999999999885 34558899
Q ss_pred EeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccccc
Q 011508 241 VYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFL 320 (484)
Q Consensus 241 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~ 320 (484)
||||+++|+|..++... ..+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 74 v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~al~~lH---~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~ 146 (325)
T cd05604 74 VLDFVNGGELFFHLQRE----RSFPEPRARFYAAEIASALGYLH---SINIVYRDLKPENILLDSQGHVVLTDFGLCKEG 146 (325)
T ss_pred EEcCCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEEeecCCcccC
Confidence 99999999999888632 35889999999999999999999 899999999999999999999999999998753
Q ss_pred ccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchhhh
Q 011508 321 PEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPERLA 400 (484)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 400 (484)
... ........|+..|+|||++.+..++.++|||||||++|||++|+.||.... ..+....
T Consensus 147 ~~~-------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~-----~~~~~~~------- 207 (325)
T cd05604 147 IAQ-------SDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRD-----VAEMYDN------- 207 (325)
T ss_pred CCC-------CCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCC-----HHHHHHH-------
Confidence 211 111223568999999999999999999999999999999999999996531 1111111
Q ss_pred hhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 401 EIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 401 ~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
+....+.. .......+.+++..|++.+|.+||++.+.++.
T Consensus 208 -~~~~~~~~---------------------~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~ 247 (325)
T cd05604 208 -ILHKPLVL---------------------RPGASLTAWSILEELLEKDRQRRLGAKEDFLE 247 (325)
T ss_pred -HHcCCccC---------------------CCCCCHHHHHHHHHHhccCHHhcCCCCCCHHH
Confidence 11111100 01124567899999999999999998644433
No 209
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=1.6e-38 Score=297.72 Aligned_cols=255 Identities=25% Similarity=0.340 Sum_probs=200.2
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
.++|++.+.||+|+||.||+|.... +++.+++|.+........+.+.+|++++++++|||++++++++. .+..
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~--~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~~~ 74 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIA--TGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYL-----RRDK 74 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecC--CCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEE-----eCCE
Confidence 3578899999999999999998543 45789999998765556678999999999999999999999853 3457
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
.+++|||+++++|.+++.... ..+++..+..++.|++.||+||| +.+++|+||+|+||+++.++.+||+|||.+
T Consensus 75 ~~l~~e~~~~~~l~~~~~~~~---~~l~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~ 148 (262)
T cd06613 75 LWIVMEYCGGGSLQDIYQVTR---GPLSELQIAYVCRETLKGLAYLH---ETGKIHRDIKGANILLTEDGDVKLADFGVS 148 (262)
T ss_pred EEEEEeCCCCCcHHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHH---hCCceecCCChhhEEECCCCCEEECccccc
Confidence 899999999999999987432 35889999999999999999999 899999999999999999999999999998
Q ss_pred cccccccccCCCCccccccccccccccCccccCCC---CCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhh
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGS---EVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEA 394 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~---~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 394 (484)
....... .......++..|+|||..... .++.++||||||+++|||++|+.||........ ......
T Consensus 149 ~~~~~~~-------~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~-~~~~~~-- 218 (262)
T cd06613 149 AQLTATI-------AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRA-LFLISK-- 218 (262)
T ss_pred hhhhhhh-------hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHh--
Confidence 7653221 111224578889999998776 789999999999999999999999865321110 000000
Q ss_pred cchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 395 LPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 395 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
.......+.. ....+.++.+++.+||+.+|.+|||+.+|+.
T Consensus 219 -----~~~~~~~~~~---------------------~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 219 -----SNFPPPKLKD---------------------KEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred -----ccCCCccccc---------------------hhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0000000000 1223567899999999999999999999875
No 210
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=1.4e-38 Score=307.65 Aligned_cols=244 Identities=23% Similarity=0.311 Sum_probs=187.1
Q ss_pred CccccccceeEEEEEEcCCCCeeEEEEEEeeccCc---cchHHHHHHHHHHHcC-CCCCceeEeeeeeeeccCCCceeeE
Q 011508 165 NLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR---GASKSFIAECQALRSI-RHRNLVKIITSCVSVDFQGNDFEAL 240 (484)
Q Consensus 165 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~l 240 (484)
+.||+|+||.||+|... .+++.||+|+++.... ...+.+.+|+.++.++ +||||+++++++ ......++
T Consensus 1 ~~lG~G~~g~V~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~-----~~~~~~~l 73 (327)
T cd05617 1 RVIGRGSYAKVLLVRLK--KNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCF-----QTTSRLFL 73 (327)
T ss_pred CeeeeCCCeEEEEEEEC--CCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEE-----EeCCEEEE
Confidence 46999999999999854 4578899999975432 2335678899999888 699999999884 34458899
Q ss_pred EeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccccc
Q 011508 241 VYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFL 320 (484)
Q Consensus 241 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~ 320 (484)
||||+++|+|..++... ..+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++..
T Consensus 74 v~e~~~~~~L~~~~~~~----~~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~ 146 (327)
T cd05617 74 VIEYVNGGDLMFHMQRQ----RKLPEEHARFYAAEICIALNFLH---ERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEG 146 (327)
T ss_pred EEeCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEeCCCCEEEeccccceec
Confidence 99999999999988633 35899999999999999999999 899999999999999999999999999998743
Q ss_pred ccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCC-ccHhHHHHhhcchhh
Q 011508 321 PEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGN-LTLHNFVKEALPERL 399 (484)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~-~~~~~~~~~~~~~~~ 399 (484)
... ........||+.|+|||++.+..++.++|||||||++|||++|+.||....... ....++.....
T Consensus 147 ~~~-------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~---- 215 (327)
T cd05617 147 LGP-------GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVI---- 215 (327)
T ss_pred cCC-------CCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHH----
Confidence 211 111223568999999999999999999999999999999999999996432211 11111111111
Q ss_pred hhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHH
Q 011508 400 AEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNME 457 (484)
Q Consensus 400 ~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ 457 (484)
....... +...+..+.+++.+||+.||++||++.
T Consensus 216 ---~~~~~~~---------------------p~~~~~~~~~li~~~L~~dP~~R~~~~ 249 (327)
T cd05617 216 ---LEKPIRI---------------------PRFLSVKASHVLKGFLNKDPKERLGCQ 249 (327)
T ss_pred ---HhCCCCC---------------------CCCCCHHHHHHHHHHhccCHHHcCCCC
Confidence 0000000 111245678999999999999999853
No 211
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=8.2e-39 Score=305.20 Aligned_cols=250 Identities=23% Similarity=0.298 Sum_probs=198.7
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCcee
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFE 238 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 238 (484)
.+|++.+.||+|+||.||+|+. ..++..||+|.+........+.+.+|+.+++.++|+|++++++++. .+...
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~--~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~~~~ 91 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAID--IATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL-----VGDEL 91 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEE--CCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEe-----cCCEE
Confidence 6789999999999999999984 3457789999998665555677889999999999999999999864 34588
Q ss_pred eEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccc
Q 011508 239 ALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAK 318 (484)
Q Consensus 239 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~ 318 (484)
++||||+++++|.+++.. ..+++.++..++.|++.||.||| +.+++||||||+||+++.++.++|+|||.+.
T Consensus 92 ~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~l~~~L~~LH---~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~ 163 (297)
T cd06656 92 WVVMEYLAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALDFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCA 163 (297)
T ss_pred EEeecccCCCCHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEECcCccce
Confidence 999999999999999863 24788999999999999999999 8999999999999999999999999999987
Q ss_pred ccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchh
Q 011508 319 FLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPER 398 (484)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 398 (484)
...... .......++..|+|||.+.+..++.++|||||||++|++++|+.||........... ... ..
T Consensus 164 ~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~-~~~----~~ 231 (297)
T cd06656 164 QITPEQ-------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL-IAT----NG 231 (297)
T ss_pred EccCCc-------cCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheee-ecc----CC
Confidence 653221 111223578899999999888899999999999999999999999965321110000 000 00
Q ss_pred hhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 399 LAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 399 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
.+.+. .+......+.+++.+||+.+|++||+++++++
T Consensus 232 -----~~~~~---------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 232 -----TPELQ---------------------NPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred -----CCCCC---------------------CccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00000 01122456789999999999999999999987
No 212
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=2.5e-38 Score=305.09 Aligned_cols=204 Identities=23% Similarity=0.342 Sum_probs=163.6
Q ss_pred cCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCceeeEEee
Q 011508 164 ENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFEALVYE 243 (484)
Q Consensus 164 ~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 243 (484)
..+||+|+||.||+|+..+..++..||+|.+.... ....+.+|++++++++||||+++++++.. ..+...++|||
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~---~~~~~~~lv~e 80 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLS---HSDRKVWLLFD 80 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEec---cCCCeEEEEEe
Confidence 35799999999999997666667889999886432 33567899999999999999999998753 23457899999
Q ss_pred cccCCCHHHHHhhcC-----CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeee----cCCCceEEccc
Q 011508 244 LMVNGSLEEWLHLNR-----DAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLL----DGELTAHVSDF 314 (484)
Q Consensus 244 ~~~~gsL~~~l~~~~-----~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll----~~~~~~kl~Df 314 (484)
|+. ++|.+++.... .....+++..++.++.|++.||+||| +.+|+||||||+||++ +.++.+||+||
T Consensus 81 ~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~Df 156 (317)
T cd07867 81 YAE-HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADM 156 (317)
T ss_pred eeC-CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHH---hCCEEcCCCCHHHEEEccCCCCCCcEEEeec
Confidence 985 58888875322 12235889999999999999999999 8999999999999999 55679999999
Q ss_pred CcccccccccccCCCCccccccccccccccCccccCC-CCCCcccceehhhHHHHHHHhCCCCCCCC
Q 011508 315 GLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-SEVSTSGDVYSFGILLLEMFTGKGPTNEM 380 (484)
Q Consensus 315 g~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~ 380 (484)
|+++........ ........+|..|+|||++.+ ..++.++|||||||++|||+||+.||...
T Consensus 157 G~a~~~~~~~~~----~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~ 219 (317)
T cd07867 157 GFARLFNSPLKP----LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred cceeccCCCccc----ccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence 999866432211 111223468899999998876 45899999999999999999999999653
No 213
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=6.1e-39 Score=299.36 Aligned_cols=251 Identities=21% Similarity=0.286 Sum_probs=197.4
Q ss_pred CCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC-ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCcee
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH-RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFE 238 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 238 (484)
+|++.+.||+|+||.||++... .++..+|+|.++... ....+.+.+|+.+++.++|+|++++++.+ ..+...
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~--~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~ 73 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHV--NSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESF-----EADGHL 73 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEc--CCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEE-----EECCEE
Confidence 4778899999999999999843 457889999986433 23446788999999999999999999985 344588
Q ss_pred eEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccc
Q 011508 239 ALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAK 318 (484)
Q Consensus 239 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~ 318 (484)
++||||+++++|.+++.... ...+++..++.++.|++.||.||| +++|+|+||||+||++++++.++|+|||.+.
T Consensus 74 ~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~ 148 (255)
T cd08219 74 YIVMEYCDGGDLMQKIKLQR--GKLFPEDTILQWFVQMCLGVQHIH---EKRVLHRDIKSKNIFLTQNGKVKLGDFGSAR 148 (255)
T ss_pred EEEEeeCCCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCcceEEECCCCcEEEcccCcce
Confidence 99999999999999886432 335789999999999999999999 8999999999999999999999999999987
Q ss_pred ccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchh
Q 011508 319 FLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPER 398 (484)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 398 (484)
...... .......++..|+|||++.+..++.++||||||+++|+|++|+.||.... ............
T Consensus 149 ~~~~~~-------~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~-----~~~~~~~~~~~~ 216 (255)
T cd08219 149 LLTSPG-------AYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANS-----WKNLILKVCQGS 216 (255)
T ss_pred eecccc-------cccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCC-----HHHHHHHHhcCC
Confidence 653221 11123458889999999988889999999999999999999999996521 111111100000
Q ss_pred hhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 399 LAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 399 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
..+ .+..+...+.+++.+||+.||++|||+.|++..
T Consensus 217 ----~~~------------------------~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 217 ----YKP------------------------LPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred ----CCC------------------------CCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 000 011224567899999999999999999999864
No 214
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=6.4e-39 Score=313.90 Aligned_cols=205 Identities=23% Similarity=0.290 Sum_probs=168.9
Q ss_pred HhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCCCCceeEeeeeeeec-c
Q 011508 156 KATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIRHRNLVKIITSCVSVD-F 232 (484)
Q Consensus 156 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~ 232 (484)
...++|++.+.||+|+||.||++. +...++.||+|++..... .....+.+|+.+++.++||||+++++++.... .
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 91 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAY--DAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSL 91 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEE--ecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccc
Confidence 345789999999999999999998 444678899999875432 23456788999999999999999999865332 1
Q ss_pred CCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEc
Q 011508 233 QGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVS 312 (484)
Q Consensus 233 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~ 312 (484)
......++||||++ +++.+.+.. .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+
T Consensus 92 ~~~~~~~lv~e~~~-~~l~~~~~~------~l~~~~~~~~~~qi~~aL~~LH---~~givHrDikp~Nill~~~~~~kl~ 161 (355)
T cd07874 92 EEFQDVYLVMELMD-ANLCQVIQM------ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKIL 161 (355)
T ss_pred cccceeEEEhhhhc-ccHHHHHhh------cCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHHEEECCCCCEEEe
Confidence 22345789999995 577777642 3788899999999999999999 8999999999999999999999999
Q ss_pred ccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCC
Q 011508 313 DFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEM 380 (484)
Q Consensus 313 Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~ 380 (484)
|||+++...... ......+|..|+|||++.+..++.++|||||||++|+|++|+.||...
T Consensus 162 Dfg~~~~~~~~~--------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 221 (355)
T cd07874 162 DFGLARTAGTSF--------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 221 (355)
T ss_pred eCcccccCCCcc--------ccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 999997643211 112346899999999999889999999999999999999999999753
No 215
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=7.9e-39 Score=308.75 Aligned_cols=242 Identities=24% Similarity=0.294 Sum_probs=187.5
Q ss_pred CCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcCC-CCCceeEeeeeeeeccCCC
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSIR-HRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~ 235 (484)
+|+..+.||+|+||.||+|.. ..+++.||+|+++... ....+.+..|..++..+. |++|+++++++ ...
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~--~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~-----~~~ 73 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAER--KGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCF-----QTV 73 (323)
T ss_pred CceEEEEEEecCCeEEEEEEE--CCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEE-----ecC
Confidence 367789999999999999984 4457889999987532 223356778899998886 46677777763 445
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
+..++||||+++|+|.+++... ..+++.+++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||
T Consensus 74 ~~~~lv~Ey~~~g~L~~~i~~~----~~l~~~~~~~i~~qi~~al~~lH---~~~ivHrDikp~Nill~~~~~ikL~Dfg 146 (323)
T cd05615 74 DRLYFVMEYVNGGDLMYHIQQV----GKFKEPQAVFYAAEISVGLFFLH---RRGIIYRDLKLDNVMLDSEGHIKIADFG 146 (323)
T ss_pred CEEEEEEcCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEeccc
Confidence 5889999999999999998643 34899999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhc
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEAL 395 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 395 (484)
+++...... .......||..|+|||++.+..++.++||||+||++|||++|+.||...... ....
T Consensus 147 ~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~-----~~~~--- 211 (323)
T cd05615 147 MCKEHMVDG-------VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED-----ELFQ--- 211 (323)
T ss_pred cccccCCCC-------ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHH-----HHHH---
Confidence 987532211 1122345899999999999889999999999999999999999999753211 1111
Q ss_pred chhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCH
Q 011508 396 PERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNM 456 (484)
Q Consensus 396 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~ 456 (484)
.+....... +..+..++.+++.+|++.+|.+|++.
T Consensus 212 -----~i~~~~~~~---------------------p~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 212 -----SIMEHNVSY---------------------PKSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred -----HHHhCCCCC---------------------CccCCHHHHHHHHHHcccCHhhCCCC
Confidence 111100000 11124567899999999999999985
No 216
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=1.8e-38 Score=304.52 Aligned_cols=281 Identities=22% Similarity=0.298 Sum_probs=199.4
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
++|++.+.||+|+||.||++.. ..++..+|+|.+..... ....++.+|++++++++||||+++++++. .++.
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~--~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~ 73 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLH--RPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFY-----SDGE 73 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEE--cCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-----eCCE
Confidence 3688999999999999999984 44567899998875432 22356889999999999999999999864 3458
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
.++||||+++++|.+++... ..+++..+..++.|++.||+|||+ ..+++|+||||+||+++.++.+||+|||++
T Consensus 74 ~~lv~ey~~~~~L~~~l~~~----~~~~~~~~~~~~~~i~~~l~~lH~--~~~i~H~dl~p~nil~~~~~~~~l~dfg~~ 147 (308)
T cd06615 74 ISICMEHMDGGSLDQVLKKA----GRIPENILGKISIAVLRGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 147 (308)
T ss_pred EEEEeeccCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHh--hCCEEECCCChHHEEEecCCcEEEccCCCc
Confidence 89999999999999999743 358899999999999999999993 258999999999999999999999999998
Q ss_pred cccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcch
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPE 397 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 397 (484)
....... .....++..|+|||.+.+..++.++||||||+++|+|++|+.||..... .....+.......
T Consensus 148 ~~~~~~~---------~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~--~~~~~~~~~~~~~ 216 (308)
T cd06615 148 GQLIDSM---------ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDA--KELEAMFGRPVSE 216 (308)
T ss_pred ccccccc---------cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcch--hhHHHhhcCcccc
Confidence 7542211 1224588999999998888899999999999999999999999864321 1111111110000
Q ss_pred hh-hhhcCcccccccccccch---hh-hh-hhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHH
Q 011508 398 RL-AEIVDPVLLVEREEGETS---EA-NA-HKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQL 463 (484)
Q Consensus 398 ~~-~~~~d~~l~~~~~~~~~~---~~-~~-~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 463 (484)
.. .................. .. .. ............+..++.+++.+||+.+|++|||++||++.-
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~ 288 (308)
T cd06615 217 GEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHP 288 (308)
T ss_pred ccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 00 000000000000000000 00 00 000000001112356789999999999999999999998774
No 217
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=2.7e-38 Score=301.16 Aligned_cols=252 Identities=23% Similarity=0.307 Sum_probs=196.2
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCcee
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFE 238 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 238 (484)
+.|++.+.||+|+||.||+|... .++..+++|.+........+.+.+|+.+++.++|+|++++++.+.. +...
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~--~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~ 84 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNK--ETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYW-----DGKL 84 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEEC--CCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEe-----CCeE
Confidence 56889999999999999999843 4568899999986655556788999999999999999999998643 3478
Q ss_pred eEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccc
Q 011508 239 ALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAK 318 (484)
Q Consensus 239 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~ 318 (484)
++||||+++++|..++... ...+++..++.++.|++.+++||| +.+++||||||+||+++.++.++|+|||.+.
T Consensus 85 ~lv~e~~~~~~l~~~~~~~---~~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~ 158 (292)
T cd06644 85 WIMIEFCPGGAVDAIMLEL---DRGLTEPQIQVICRQMLEALQYLH---SMKIIHRDLKAGNVLLTLDGDIKLADFGVSA 158 (292)
T ss_pred EEEEecCCCCcHHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHh---cCCeeecCCCcceEEEcCCCCEEEccCccce
Confidence 9999999999999887633 235899999999999999999999 8999999999999999999999999999886
Q ss_pred ccccccccCCCCccccccccccccccCccccC-----CCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHh
Q 011508 319 FLPEAANNLSSNQSSSVGVKGTVGYAAPEYGM-----GSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKE 393 (484)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 393 (484)
...... .......++..|+|||++. ...++.++|||||||++|||++|+.||...... .....
T Consensus 159 ~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-----~~~~~ 226 (292)
T cd06644 159 KNVKTL-------QRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM-----RVLLK 226 (292)
T ss_pred eccccc-------cccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHH-----HHHHH
Confidence 542211 1112345788999999874 345788999999999999999999998653210 00000
Q ss_pred hcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 394 ALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 394 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
... ...+... .+..+..++.+++.+||+.+|++||+++|+++
T Consensus 227 ~~~-----~~~~~~~---------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 227 IAK-----SEPPTLS---------------------QPSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred Hhc-----CCCccCC---------------------CCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 000 0000000 01122456889999999999999999999976
No 218
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=1.2e-38 Score=304.94 Aligned_cols=264 Identities=27% Similarity=0.434 Sum_probs=201.9
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCC--eeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCC
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDH--ETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQG 234 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~--~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 234 (484)
.++|+..+.||+|+||.||+|.+...+. ...+|+|.+..... .....+.+|+.+++.++||||++++++|..
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~----- 80 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLS----- 80 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcC-----
Confidence 3567888999999999999998654332 23689998865432 223468899999999999999999998742
Q ss_pred CceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEccc
Q 011508 235 NDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDF 314 (484)
Q Consensus 235 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 314 (484)
...++++||+++|+|.+++... ...+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+||
T Consensus 81 -~~~~~v~e~~~~g~l~~~~~~~---~~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~dikp~Nill~~~~~~kL~Df 153 (303)
T cd05110 81 -PTIQLVTQLMPHGCLLDYVHEH---KDNIGSQLLLNWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDF 153 (303)
T ss_pred -CCceeeehhcCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHh---hcCeeccccccceeeecCCCceEEccc
Confidence 1357999999999999998743 235889999999999999999999 899999999999999999999999999
Q ss_pred CcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHh
Q 011508 315 GLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKE 393 (484)
Q Consensus 315 g~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~ 393 (484)
|+++........ .......++..|+|||.+.+..++.++|||||||++|||++ |+.||...... ...++...
T Consensus 154 g~~~~~~~~~~~-----~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~--~~~~~~~~ 226 (303)
T cd05110 154 GLARLLEGDEKE-----YNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTR--EIPDLLEK 226 (303)
T ss_pred cccccccCcccc-----cccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHC
Confidence 999866432211 11112345678999999988899999999999999999997 89998653211 11111110
Q ss_pred hcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHHHHh
Q 011508 394 ALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRNKLV 471 (484)
Q Consensus 394 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~~ 471 (484)
. ..... +..+...+.+++..||..+|++||+++++++.|+++.....
T Consensus 227 ~----------~~~~~---------------------~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~~ 273 (303)
T cd05110 227 G----------ERLPQ---------------------PPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDPQ 273 (303)
T ss_pred C----------CCCCC---------------------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhchh
Confidence 0 00000 11224568899999999999999999999999998865554
No 219
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=7.6e-39 Score=313.76 Aligned_cols=208 Identities=26% Similarity=0.337 Sum_probs=171.8
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
++|++.+.||+|+||.||+++.. .+++.||+|+++... ......+.+|+.++..++|+||+++++.+ .++
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~-----~~~ 73 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKK--DTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSF-----QDK 73 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEEC--CCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEE-----EcC
Confidence 46888999999999999999844 457889999997432 23345678899999999999999999884 455
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
...++||||+++|+|.+++... ..+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||
T Consensus 74 ~~~~lv~E~~~gg~L~~~l~~~----~~l~~~~~~~~~~qi~~~L~~lH---~~givHrDLkp~NIli~~~~~vkL~DfG 146 (360)
T cd05627 74 RNLYLIMEFLPGGDMMTLLMKK----DTLSEEATQFYIAETVLAIDAIH---QLGFIHRDIKPDNLLLDAKGHVKLSDFG 146 (360)
T ss_pred CEEEEEEeCCCCccHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEccCCCHHHEEECCCCCEEEeecc
Confidence 6899999999999999999743 35889999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccCC----------------------------CCccccccccccccccCccccCCCCCCcccceehhhHHH
Q 011508 316 LAKFLPEAANNLS----------------------------SNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILL 367 (484)
Q Consensus 316 ~a~~~~~~~~~~~----------------------------~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl 367 (484)
++..+........ ..........||+.|+|||++.+..++.++|||||||++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil 226 (360)
T cd05627 147 LCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIM 226 (360)
T ss_pred CCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceecccccee
Confidence 9875532110000 000011235699999999999999999999999999999
Q ss_pred HHHHhCCCCCCCC
Q 011508 368 LEMFTGKGPTNEM 380 (484)
Q Consensus 368 ~elltg~~p~~~~ 380 (484)
|||++|+.||...
T Consensus 227 yel~tG~~Pf~~~ 239 (360)
T cd05627 227 YEMLIGYPPFCSE 239 (360)
T ss_pred eecccCCCCCCCC
Confidence 9999999999753
No 220
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.3e-38 Score=303.50 Aligned_cols=251 Identities=23% Similarity=0.322 Sum_probs=199.3
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCcee
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFE 238 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 238 (484)
.+|++.+.||.|++|.||+|+ +..++..|++|.+........+.+.+|+.+++.++|+|++++++++. .+...
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~--~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~~~~ 91 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAI--DVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFL-----VGDEL 91 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEE--EcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEe-----cCceE
Confidence 468999999999999999998 44467889999997665555678889999999999999999999864 34588
Q ss_pred eEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccc
Q 011508 239 ALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAK 318 (484)
Q Consensus 239 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~ 318 (484)
++|+||+++++|.+++.. ..+++.++..++.|++.||+||| +.+++||||||+||+++.++.+||+|||++.
T Consensus 92 ~lv~e~~~~~~L~~~~~~-----~~l~~~~~~~i~~~l~~al~~LH---~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~ 163 (296)
T cd06655 92 FVVMEYLAGGSLTDVVTE-----TCMDEAQIAAVCRECLQALEFLH---ANQVIHRDIKSDNVLLGMDGSVKLTDFGFCA 163 (296)
T ss_pred EEEEEecCCCcHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEccCccch
Confidence 999999999999998863 24889999999999999999999 8999999999999999999999999999987
Q ss_pred ccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchh
Q 011508 319 FLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPER 398 (484)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 398 (484)
...... .......++..|+|||.+.+..++.++|||||||++|+|++|+.||........ .. .... .
T Consensus 164 ~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~-~~-~~~~---~- 230 (296)
T cd06655 164 QITPEQ-------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA-LY-LIAT---N- 230 (296)
T ss_pred hccccc-------ccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HH-HHHh---c-
Confidence 653321 111223578899999999888899999999999999999999999965321100 00 0000 0
Q ss_pred hhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 399 LAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 399 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
..+.+.. +..++..+.+++.+||..||++|||+.+++..
T Consensus 231 ----~~~~~~~---------------------~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~ 269 (296)
T cd06655 231 ----GTPELQN---------------------PEKLSPIFRDFLNRCLEMDVEKRGSAKELLQH 269 (296)
T ss_pred ----CCcccCC---------------------cccCCHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 0000000 12235568899999999999999999999853
No 221
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=6.8e-39 Score=309.24 Aligned_cols=238 Identities=28% Similarity=0.324 Sum_probs=182.6
Q ss_pred CccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHH-HHHcCCCCCceeEeeeeeeeccCCCceeeE
Q 011508 165 NLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQ-ALRSIRHRNLVKIITSCVSVDFQGNDFEAL 240 (484)
Q Consensus 165 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 240 (484)
+.||+|+||.||+|+. ..++..||+|++.... ......+..|.. +++.++||||+++++++ ...+..++
T Consensus 1 ~~lg~G~~g~Vy~~~~--~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~-----~~~~~~~l 73 (321)
T cd05603 1 KVIGKGSFGKVLLAKR--KSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSF-----QTAEKLYF 73 (321)
T ss_pred CeeeeCCCEEEEEEEE--CCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEE-----EcCCEEEE
Confidence 4699999999999984 3457889999987432 122234555554 57889999999999884 34558899
Q ss_pred EeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccccc
Q 011508 241 VYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFL 320 (484)
Q Consensus 241 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~ 320 (484)
||||+++++|..++... ..+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 74 v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~ 146 (321)
T cd05603 74 VLDYVNGGELFFHLQRE----RCFLEPRARFYAAEVASAIGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEG 146 (321)
T ss_pred EEcCCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEccCCCCccC
Confidence 99999999999888632 34788899999999999999999 899999999999999999999999999998753
Q ss_pred ccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchhhh
Q 011508 321 PEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPERLA 400 (484)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 400 (484)
.... .......|++.|+|||.+.+..++.++|||||||++|||++|+.||.... .......
T Consensus 147 ~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~-----~~~~~~~------- 207 (321)
T cd05603 147 VEPE-------ETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRD-----VSQMYDN------- 207 (321)
T ss_pred CCCC-------CccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCC-----HHHHHHH-------
Confidence 2111 11223468999999999998899999999999999999999999996531 1111111
Q ss_pred hhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHH
Q 011508 401 EIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNME 457 (484)
Q Consensus 401 ~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ 457 (484)
+....+.. +......+.+++.+|++.||.+||++.
T Consensus 208 -i~~~~~~~---------------------~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 208 -ILHKPLQL---------------------PGGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred -HhcCCCCC---------------------CCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 11111100 111245688999999999999999864
No 222
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=1.4e-38 Score=322.17 Aligned_cols=203 Identities=23% Similarity=0.353 Sum_probs=163.1
Q ss_pred hHHHhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCC------CceeEeee
Q 011508 153 NLFKATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHR------NLVKIITS 226 (484)
Q Consensus 153 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~------niv~~~~~ 226 (484)
++...+++|++.+.||+|+||+||+|... ..+..||||+++... .....+..|++++..++|. ++++++++
T Consensus 123 ~~~~~~~~y~i~~~lG~G~fg~V~~a~~~--~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~ 199 (467)
T PTZ00284 123 DIDVSTQRFKILSLLGEGTFGKVVEAWDR--KRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRY 199 (467)
T ss_pred ccccCCCcEEEEEEEEeccCEEEEEEEEc--CCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEE
Confidence 33445688999999999999999999843 457889999986432 2234556677777777544 57888877
Q ss_pred eeeeccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC-CCeeecCCCCCCeeecC
Q 011508 227 CVSVDFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCE-TPIVHCDLKPSNVLLDG 305 (484)
Q Consensus 227 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~dlk~~NIll~~ 305 (484)
+. ....+.++|||++ +++|.+++... ..+++..+..|+.||+.||+||| . .+|+||||||+|||++.
T Consensus 200 ~~----~~~~~~~iv~~~~-g~~l~~~l~~~----~~l~~~~~~~i~~qi~~aL~yLH---~~~gIiHrDlKP~NILl~~ 267 (467)
T PTZ00284 200 FQ----NETGHMCIVMPKY-GPCLLDWIMKH----GPFSHRHLAQIIFQTGVALDYFH---TELHLMHTDLKPENILMET 267 (467)
T ss_pred EE----cCCceEEEEEecc-CCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---hcCCeecCCCCHHHEEEec
Confidence 53 2345789999998 88999988643 35899999999999999999999 6 59999999999999987
Q ss_pred CC----------------ceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHH
Q 011508 306 EL----------------TAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLE 369 (484)
Q Consensus 306 ~~----------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~e 369 (484)
++ .+||+|||.+..... ......||..|+|||++.+..++.++|||||||++||
T Consensus 268 ~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~----------~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~e 337 (467)
T PTZ00284 268 SDTVVDPVTNRALPPDPCRVRICDLGGCCDERH----------SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYE 337 (467)
T ss_pred CCcccccccccccCCCCceEEECCCCccccCcc----------ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHH
Confidence 65 499999998753211 1223568999999999999999999999999999999
Q ss_pred HHhCCCCCCCC
Q 011508 370 MFTGKGPTNEM 380 (484)
Q Consensus 370 lltg~~p~~~~ 380 (484)
|++|+.||...
T Consensus 338 lltG~~pf~~~ 348 (467)
T PTZ00284 338 LYTGKLLYDTH 348 (467)
T ss_pred HHhCCCCCCCC
Confidence 99999999753
No 223
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4.1e-38 Score=305.51 Aligned_cols=267 Identities=24% Similarity=0.365 Sum_probs=203.5
Q ss_pred cCCCCccCccccccceeEEEEEEcCC-----CCeeEEEEEEeeccCc-cchHHHHHHHHHHHcC-CCCCceeEeeeeeee
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHD-----DHETLVAVKVLNLQHR-GASKSFIAECQALRSI-RHRNLVKIITSCVSV 230 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 230 (484)
..+|.+.+.||+|+||.||+|..... .....||+|.++.... ...+.+.+|+++++++ +|+||++++++|.
T Consensus 11 ~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~-- 88 (334)
T cd05100 11 RTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACT-- 88 (334)
T ss_pred HhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEc--
Confidence 34688999999999999999975321 1234689998875432 2346788999999999 8999999999864
Q ss_pred ccCCCceeeEEeecccCCCHHHHHhhcCC------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCC
Q 011508 231 DFQGNDFEALVYELMVNGSLEEWLHLNRD------------APRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKP 298 (484)
Q Consensus 231 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~ 298 (484)
.+...++++||+++|+|.+++..... ....+++.+++.++.|++.||+||| +++++||||||
T Consensus 89 ---~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~givH~dlkp 162 (334)
T cd05100 89 ---QDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLA---SQKCIHRDLAA 162 (334)
T ss_pred ---cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH---HCCeecccccc
Confidence 34478999999999999999975421 1235889999999999999999999 89999999999
Q ss_pred CCeeecCCCceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCC
Q 011508 299 SNVLLDGELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPT 377 (484)
Q Consensus 299 ~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~ 377 (484)
+||++++++.+||+|||+++........ .......++..|+|||.+.+..++.++||||||+++|||++ |..||
T Consensus 163 ~Nill~~~~~~kL~Dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~ 237 (334)
T cd05100 163 RNVLVTEDNVMKIADFGLARDVHNIDYY-----KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPY 237 (334)
T ss_pred ceEEEcCCCcEEECCcccceeccccccc-----ccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCC
Confidence 9999999999999999998765332110 01111234567999999998899999999999999999998 88888
Q ss_pred CCCccCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHH
Q 011508 378 NEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNME 457 (484)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ 457 (484)
.... ..+...... .. ... ..+..+..++.+++.+||+.+|++|||+.
T Consensus 238 ~~~~-----~~~~~~~~~--------~~-~~~-------------------~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 284 (334)
T cd05100 238 PGIP-----VEELFKLLK--------EG-HRM-------------------DKPANCTHELYMIMRECWHAVPSQRPTFK 284 (334)
T ss_pred CCCC-----HHHHHHHHH--------cC-CCC-------------------CCCCCCCHHHHHHHHHHcccChhhCcCHH
Confidence 6531 111111100 00 000 00122356788999999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 011508 458 EVAAQLLSFRNKL 470 (484)
Q Consensus 458 evl~~L~~i~~~~ 470 (484)
|+++.|+.+....
T Consensus 285 ell~~l~~~~~~~ 297 (334)
T cd05100 285 QLVEDLDRVLTVT 297 (334)
T ss_pred HHHHHHHHHhhhc
Confidence 9999999887433
No 224
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=3.1e-38 Score=299.44 Aligned_cols=252 Identities=27% Similarity=0.328 Sum_probs=193.7
Q ss_pred CCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc---cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 161 FSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR---GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 161 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
|+..+.||+|+||+||+|... .+++.+|+|.+..... .....+.+|+++++.++|+|++++.+.+ ..++.
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~-----~~~~~ 74 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVR--ATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAY-----ETKDA 74 (285)
T ss_pred ceEEEEEecCCCeEEEEEEEC--CCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEE-----ecCCE
Confidence 667789999999999999854 3578899999875432 2234577899999999999999998874 34558
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
.++||||+++++|.+++.... ...+++..+..++.|++.||.||| +++|+||||||+||++++++.++|+|||++
T Consensus 75 ~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~ql~~~l~~lH---~~~iiH~dikp~Nili~~~~~~kl~Dfg~~ 149 (285)
T cd05632 75 LCLVLTIMNGGDLKFHIYNMG--NPGFEEERALFYAAEILCGLEDLH---RENTVYRDLKPENILLDDYGHIRISDLGLA 149 (285)
T ss_pred EEEEEEeccCccHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCCHHHEEECCCCCEEEecCCcc
Confidence 899999999999998886432 235899999999999999999999 899999999999999999999999999998
Q ss_pred cccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcch
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPE 397 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 397 (484)
....... ......|+..|+|||++.+..++.++|||||||++|||++|+.||....... .... +......
T Consensus 150 ~~~~~~~--------~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~-~~~~-~~~~~~~ 219 (285)
T cd05632 150 VKIPEGE--------SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKV-KREE-VDRRVLE 219 (285)
T ss_pred eecCCCC--------cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH-HHHH-HHHhhhc
Confidence 7543211 1123458999999999988899999999999999999999999997532110 0000 1100000
Q ss_pred hhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCC-----HHHHHHH
Q 011508 398 RLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMN-----MEEVAAQ 462 (484)
Q Consensus 398 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~evl~~ 462 (484)
.. ... ...+...+.+++..|++.||++||+ +.++++.
T Consensus 220 ----~~-~~~-----------------------~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 220 ----TE-EVY-----------------------SAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred ----cc-ccc-----------------------CccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence 00 000 1122456789999999999999999 6666653
No 225
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=3e-38 Score=299.46 Aligned_cols=252 Identities=28% Similarity=0.350 Sum_probs=195.4
Q ss_pred CCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCcc---chHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 161 FSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRG---ASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 161 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
|+..+.||+|+||.||++... .+++.||+|.+...... ....+.+|+.++++++|++++++++.+. .++.
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~--~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~-----~~~~ 74 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVR--ATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYE-----TKDA 74 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEc--CCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEe-----cCCE
Confidence 677789999999999999854 45789999998754321 2345778999999999999999998853 3458
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
.++||||+++++|.+++.... ...+++..+..++.|++.||.||| +.+|+||||||+||+++.++.++|+|||++
T Consensus 75 ~~lv~e~~~g~~L~~~l~~~~--~~~l~~~~~~~~~~qi~~~l~~lH---~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~ 149 (285)
T cd05630 75 LCLVLTLMNGGDLKFHIYHMG--EAGFEEGRAVFYAAEICCGLEDLH---QERIVYRDLKPENILLDDHGHIRISDLGLA 149 (285)
T ss_pred EEEEEEecCCCcHHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHEEECCCCCEEEeeccce
Confidence 899999999999999986432 235889999999999999999999 899999999999999999999999999998
Q ss_pred cccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcch
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPE 397 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 397 (484)
....... ......|+..|+|||++.+..++.++|||||||++|+|++|+.||....... ... ...
T Consensus 150 ~~~~~~~--------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~-~~~-~~~----- 214 (285)
T cd05630 150 VHVPEGQ--------TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI-KRE-EVE----- 214 (285)
T ss_pred eecCCCc--------cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccc-hHH-HHH-----
Confidence 7543221 1122358999999999998899999999999999999999999997532110 000 000
Q ss_pred hhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCC-----HHHHHHH
Q 011508 398 RLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMN-----MEEVAAQ 462 (484)
Q Consensus 398 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~evl~~ 462 (484)
...+... .. .+..+...+.+++..||+.||++||| ++|+++.
T Consensus 215 ---~~~~~~~-~~-------------------~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h 261 (285)
T cd05630 215 ---RLVKEVQ-EE-------------------YSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEH 261 (285)
T ss_pred ---hhhhhhh-hh-------------------cCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcC
Confidence 0000000 00 01122456889999999999999999 8898873
No 226
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=5.7e-38 Score=291.93 Aligned_cols=247 Identities=28% Similarity=0.410 Sum_probs=191.3
Q ss_pred CccccccceeEEEEEEcCCCCeeEEEEEEeeccCcc-chHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCceeeEEee
Q 011508 165 NLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRG-ASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFEALVYE 243 (484)
Q Consensus 165 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 243 (484)
++||+|+||.||+|... ++..+|+|.++..... ....+.+|++++++++||||+++++++.. ....++|||
T Consensus 1 ~~ig~g~~g~vy~~~~~---~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~lv~e 72 (250)
T cd05085 1 ELLGKGNFGEVFKGTLK---DKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQ-----RQPIYIVME 72 (250)
T ss_pred CccCCCCCceEEEEEec---CCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEec-----CCccEEEEE
Confidence 36999999999999854 4678999988754432 23468899999999999999999998643 347899999
Q ss_pred cccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcccccccc
Q 011508 244 LMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFLPEA 323 (484)
Q Consensus 244 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~~~~ 323 (484)
|+++++|.+++.... ..+++..++.++.|++.+|.||| +++++||||||+||+++.++.+||+|||++......
T Consensus 73 ~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH---~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 146 (250)
T cd05085 73 LVPGGDFLSFLRKKK---DELKTKQLVKFALDAAAGMAYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDG 146 (250)
T ss_pred CCCCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccChheEEEcCCCeEEECCCccceecccc
Confidence 999999999986432 34789999999999999999999 899999999999999999999999999998754321
Q ss_pred cccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhhcchhhhhh
Q 011508 324 ANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEALPERLAEI 402 (484)
Q Consensus 324 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (484)
. ........++..|+|||+..+..++.++||||||+++|++++ |..||...... ..... +...
T Consensus 147 ~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~-----~~~~~-----~~~~ 210 (250)
T cd05085 147 I------YSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQ-----QAREQ-----VEKG 210 (250)
T ss_pred c------cccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHH-----HHHHH-----HHcC
Confidence 1 011111234577999999988889999999999999999998 99998653111 10000 0000
Q ss_pred cCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHH
Q 011508 403 VDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLL 464 (484)
Q Consensus 403 ~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 464 (484)
..... +..++..+.+++.+|++.+|++||++.|++++|.
T Consensus 211 ~~~~~-----------------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 211 YRMSC-----------------------PQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred CCCCC-----------------------CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 00000 1123567899999999999999999999999874
No 227
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=1.2e-38 Score=310.54 Aligned_cols=281 Identities=20% Similarity=0.247 Sum_probs=197.3
Q ss_pred HHhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCCCCceeEeeeeeeecc
Q 011508 155 FKATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIRHRNLVKIITSCVSVDF 232 (484)
Q Consensus 155 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 232 (484)
....++|.+.+.||+|+||.||+|.. ..++..||+|++..... .....+.+|+.++++++|+||+++++++.....
T Consensus 11 ~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 88 (343)
T cd07878 11 WEVPERYQNLTPVGSGAYGSVCSAYD--TRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATS 88 (343)
T ss_pred hhhhhhhhhheecccCCCeEEEEEEE--CCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccc
Confidence 44568899999999999999999984 44578899999864322 233567789999999999999999987643221
Q ss_pred -CCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEE
Q 011508 233 -QGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHV 311 (484)
Q Consensus 233 -~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl 311 (484)
......++++|++ +++|.+++.. ..+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||
T Consensus 89 ~~~~~~~~~~~~~~-~~~l~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrdikp~Nil~~~~~~~kl 159 (343)
T cd07878 89 IENFNEVYLVTNLM-GADLNNIVKC-----QKLSDEHVQFLIYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDCELRI 159 (343)
T ss_pred ccccCcEEEEeecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecccCChhhEEECCCCCEEE
Confidence 1224578999998 8899888752 34899999999999999999999 899999999999999999999999
Q ss_pred cccCcccccccccccCCCCccccccccccccccCccccCC-CCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHH
Q 011508 312 SDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNF 390 (484)
Q Consensus 312 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~ 390 (484)
+|||+++..... .....++..|+|||++.+ ..++.++|||||||++|+|++|+.||...... ..+..+
T Consensus 160 ~Dfg~~~~~~~~----------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~~ 228 (343)
T cd07878 160 LDFGLARQADDE----------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYI-DQLKRI 228 (343)
T ss_pred cCCccceecCCC----------cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHH-HHHHHH
Confidence 999999865321 123458899999999876 56899999999999999999999999653211 011111
Q ss_pred HHhh---cchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 391 VKEA---LPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 391 ~~~~---~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
.... .++....+....... ...... ... ...... ........+.+++.+|++.||.+|||+.|+++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~-~~~~~~--~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 229 MEVVGTPSPEVLKKISSEHARK-YIQSLP-HMP-QQDLKK--IFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred HHHhCCCCHHHHHhcchhhHHH-Hhhccc-ccc-chhHHH--hccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 1100 000000000000000 000000 000 000000 001123457899999999999999999999965
No 228
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=3.5e-38 Score=297.51 Aligned_cols=262 Identities=26% Similarity=0.336 Sum_probs=202.7
Q ss_pred HhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcC-CCCCceeEeeeeeeecc-C
Q 011508 156 KATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSI-RHRNLVKIITSCVSVDF-Q 233 (484)
Q Consensus 156 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~-~ 233 (484)
..+++|++.+.||+|++|.||+|... .++..+++|++..... ..+.+.+|+.+++++ +|+||+++++++..... .
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~--~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~ 79 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHK--KTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPG 79 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEEC--CCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCC
Confidence 35689999999999999999999954 3567899999875543 346789999999999 79999999999765442 3
Q ss_pred CCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcc
Q 011508 234 GNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSD 313 (484)
Q Consensus 234 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~D 313 (484)
.....++||||+++++|.+++.........+++..+..++.|++.||+||| +.+++|+||+|+||++++++.++|+|
T Consensus 80 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH---~~~i~H~~l~p~ni~~~~~~~~~l~d 156 (275)
T cd06608 80 NDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLH---ENKVIHRDIKGQNILLTKNAEVKLVD 156 (275)
T ss_pred cceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEEccCCeEEECC
Confidence 355689999999999999998754433456899999999999999999999 89999999999999999999999999
Q ss_pred cCcccccccccccCCCCccccccccccccccCccccCC-----CCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHh
Q 011508 314 FGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-----SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLH 388 (484)
Q Consensus 314 fg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-----~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~ 388 (484)
||.+....... .......++..|+|||.+.. ..++.++|||||||++|+|++|+.||....... .+.
T Consensus 157 ~~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~ 228 (275)
T cd06608 157 FGVSAQLDSTL-------GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMR-ALF 228 (275)
T ss_pred Cccceecccch-------hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHH-HHH
Confidence 99987653221 11123458889999998653 346789999999999999999999996431110 010
Q ss_pred HHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 389 NFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 389 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
+.. ....+.+.. ...+...+.+++.+||..||++|||+.|+++
T Consensus 229 ~~~---------~~~~~~~~~---------------------~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 229 KIP---------RNPPPTLKS---------------------PENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred Hhh---------ccCCCCCCc---------------------hhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 000 000000000 1223567889999999999999999999975
No 229
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=4.2e-38 Score=297.13 Aligned_cols=260 Identities=23% Similarity=0.346 Sum_probs=200.7
Q ss_pred CCCCccCccccccceeEEEEEEcCC---CCeeEEEEEEeeccCcc-chHHHHHHHHHHHcCCCCCceeEeeeeeeeccCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHD---DHETLVAVKVLNLQHRG-ASKSFIAECQALRSIRHRNLVKIITSCVSVDFQG 234 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~---~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 234 (484)
++|++...||+|+||.||+|+.... .....|++|.+...... ....+.+|++++++++|+||+++++++. +
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~ 79 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCR-----E 79 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEEC-----C
Confidence 5688899999999999999996532 23567999988754433 3467899999999999999999999853 3
Q ss_pred CceeeEEeecccCCCHHHHHhhcCCC-----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCce
Q 011508 235 NDFEALVYELMVNGSLEEWLHLNRDA-----PRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTA 309 (484)
Q Consensus 235 ~~~~~lv~e~~~~gsL~~~l~~~~~~-----~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~ 309 (484)
....++||||+++|+|.+++...... ...+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+
T Consensus 80 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~ 156 (275)
T cd05046 80 AEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLS---NARFVHRDLAARNCLVSSQREV 156 (275)
T ss_pred CCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhh---hcCcccCcCccceEEEeCCCcE
Confidence 45789999999999999999754422 125899999999999999999999 8999999999999999999999
Q ss_pred EEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHh
Q 011508 310 HVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLH 388 (484)
Q Consensus 310 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~ 388 (484)
+++|||++....... ........++..|+|||.+.+..++.++||||||+++|+|++ |..||......
T Consensus 157 ~l~~~~~~~~~~~~~------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~----- 225 (275)
T cd05046 157 KVSLLSLSKDVYNSE------YYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDE----- 225 (275)
T ss_pred EEcccccccccCccc------ccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchH-----
Confidence 999999987542211 111122346778999999888888999999999999999999 78888643211
Q ss_pred HHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHH
Q 011508 389 NFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLL 464 (484)
Q Consensus 389 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 464 (484)
...... ....+.. .....++..+.+++.+||+.+|++|||+.|+++.|+
T Consensus 226 ~~~~~~--------~~~~~~~-------------------~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 226 EVLNRL--------QAGKLEL-------------------PVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred HHHHHH--------HcCCcCC-------------------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 111110 0000000 001123567899999999999999999999999875
No 230
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=3e-38 Score=305.76 Aligned_cols=202 Identities=26% Similarity=0.334 Sum_probs=168.3
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
++|++.+.||+|+||.||+++.. .+++.||+|++.... ....+.+.+|..++..++|+||+++++++ ..+
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~ 73 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMK--NTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAF-----QDE 73 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEEC--CCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEE-----ecC
Confidence 46889999999999999999844 457889999987422 22345688899999999999999999885 445
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
+..++||||+++|+|.+++... ...+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||
T Consensus 74 ~~~~lv~e~~~g~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg 147 (331)
T cd05597 74 NNLYLVMDYYVGGDLLTLLSKF---EDRLPEDMARFYLAEMVLAIDSVH---QLGYVHRDIKPDNVLLDKNGHIRLADFG 147 (331)
T ss_pred CeEEEEEecCCCCcHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH---hCCeEECCCCHHHEEECCCCCEEEEECC
Confidence 5899999999999999999742 235889999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCC-----CCCCcccceehhhHHHHHHHhCCCCCCC
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-----SEVSTSGDVYSFGILLLEMFTGKGPTNE 379 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-----~~~~~~~Dvws~Gvvl~elltg~~p~~~ 379 (484)
++....... ........||+.|+|||++.. ..++.++|||||||++|||++|+.||..
T Consensus 148 ~~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~ 210 (331)
T cd05597 148 SCLRLLADG------TVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYA 210 (331)
T ss_pred ceeecCCCC------CccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCC
Confidence 987653221 111122458999999998763 4578899999999999999999999965
No 231
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-40 Score=292.33 Aligned_cols=249 Identities=24% Similarity=0.347 Sum_probs=205.7
Q ss_pred CCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCceeeE
Q 011508 161 FSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFEAL 240 (484)
Q Consensus 161 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 240 (484)
|.+.++||+|+||.||+|. +..+|..+|||.+... .+..++.+|+.++++++.|++|++||.++. +...|+
T Consensus 35 FDi~~KLGEGSYGSV~KAI--H~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK-----~sDLWI 105 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAI--HRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFK-----HSDLWI 105 (502)
T ss_pred HHHHHHhcCCcchHHHHHH--HhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhcc-----CCceEe
Confidence 5677899999999999999 6668899999998754 356789999999999999999999998643 337899
Q ss_pred EeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccccc
Q 011508 241 VYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFL 320 (484)
Q Consensus 241 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~ 320 (484)
|||||..|++.+.++.. .+++++.++..+++..++||+||| ...-+|||||+.|||+..+|.+||+|||.|..+
T Consensus 106 VMEYCGAGSiSDI~R~R---~K~L~E~EIs~iL~~TLKGL~YLH---~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQL 179 (502)
T KOG0574|consen 106 VMEYCGAGSISDIMRAR---RKPLSEQEISAVLRDTLKGLQYLH---DLKKIHRDIKAGNILLNTDGIAKLADFGVAGQL 179 (502)
T ss_pred ehhhcCCCcHHHHHHHh---cCCccHHHHHHHHHHHHhHHHHHH---HHHHHHhhcccccEEEcccchhhhhhccccchh
Confidence 99999999999999854 356999999999999999999999 677899999999999999999999999999876
Q ss_pred ccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchhhh
Q 011508 321 PEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPERLA 400 (484)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 400 (484)
.+. -.......||+.|||||++..-.|..++||||+|++..||..|++||.+...-... +
T Consensus 180 TDT-------MAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAI--------F----- 239 (502)
T KOG0574|consen 180 TDT-------MAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAI--------F----- 239 (502)
T ss_pred hhh-------HHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccccccccee--------E-----
Confidence 432 23344567999999999999889999999999999999999999998763211000 0
Q ss_pred hhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 401 EIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 401 ~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
++ ...+......++....++.++++.||-..|++|-|+.++++.
T Consensus 240 -MI-----------------PT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 240 -MI-----------------PTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred -ec-----------------cCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 00 001112222366668899999999999999999999999864
No 232
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=4.3e-38 Score=296.05 Aligned_cols=257 Identities=25% Similarity=0.399 Sum_probs=198.5
Q ss_pred CCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC----------ccchHHHHHHHHHHHc-CCCCCceeEeeeee
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH----------RGASKSFIAECQALRS-IRHRNLVKIITSCV 228 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~----------~~~~~~~~~e~~~l~~-l~h~niv~~~~~~~ 228 (484)
+|++.+.||+|+||.||+|..... .+..+|+|.+.... ......+.+|+.++.+ ++|+||+++++++.
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~ 79 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNN-GQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFL 79 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCC-CCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEc
Confidence 478889999999999999996542 46789999876322 1223457788888875 79999999999853
Q ss_pred eeccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCc
Q 011508 229 SVDFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELT 308 (484)
Q Consensus 229 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~ 308 (484)
.++..++||||+++++|.+++.........+++..++.++.|++.||.|||+ ..+++|+||+|+||+++.++.
T Consensus 80 -----~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~--~~~i~H~dl~~~nil~~~~~~ 152 (269)
T cd08528 80 -----ENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHK--EKRIVHRDLTPNNIMLGEDDK 152 (269)
T ss_pred -----cCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhcc--CCceeecCCCHHHEEECCCCc
Confidence 4458899999999999999986544445568999999999999999999993 268999999999999999999
Q ss_pred eEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHh
Q 011508 309 AHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLH 388 (484)
Q Consensus 309 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~ 388 (484)
+||+|||.+....... ......++..|+|||...+..++.++||||||+++|||++|+.||.... ..
T Consensus 153 ~~l~dfg~~~~~~~~~--------~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~-----~~ 219 (269)
T cd08528 153 VTITDFGLAKQKQPES--------KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTN-----ML 219 (269)
T ss_pred EEEecccceeeccccc--------ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccC-----HH
Confidence 9999999998653321 1223458889999999998889999999999999999999999986421 11
Q ss_pred HHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHH
Q 011508 389 NFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLL 464 (484)
Q Consensus 389 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 464 (484)
.... .+.+....... ...+...+.+++.+||+.||++||++.||.++++
T Consensus 220 ~~~~--------~~~~~~~~~~~-------------------~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 220 SLAT--------KIVEAVYEPLP-------------------EGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred HHHH--------HHhhccCCcCC-------------------cccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 1111 11111000000 0112457889999999999999999999999885
No 233
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=4.7e-38 Score=294.28 Aligned_cols=254 Identities=26% Similarity=0.457 Sum_probs=198.2
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
.++|.+.+.||+|+||.||+|... .+..+|+|.+.... .....+.+|++++++++|+|++++.+.+.. ..
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~---~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~------~~ 74 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYN---KHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK------EP 74 (260)
T ss_pred ccceeEEeEecCccceEEEEEEec---CCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC------CC
Confidence 467899999999999999999854 34569999876432 234678899999999999999999988532 46
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
.+++|||+++++|.+++.... ...+++..++.++.|++.||.||| +.+++|+||||+||+++.++.+||+|||.+
T Consensus 75 ~~~v~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~ 149 (260)
T cd05073 75 IYIITEFMAKGSLLDFLKSDE--GSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLA 149 (260)
T ss_pred eEEEEEeCCCCcHHHHHHhCC--ccccCHHHHHHHHHHHHHHHHHHH---hCCccccccCcceEEEcCCCcEEECCCcce
Confidence 789999999999999997532 345788999999999999999999 899999999999999999999999999998
Q ss_pred cccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhhcc
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEALP 396 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 396 (484)
....... ........++..|+|||++....++.++|||||||++|+++| |+.||...... ..........
T Consensus 150 ~~~~~~~------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~--~~~~~~~~~~- 220 (260)
T cd05073 150 RVIEDNE------YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP--EVIRALERGY- 220 (260)
T ss_pred eeccCCC------cccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHhCCC-
Confidence 7653221 111112335678999999988889999999999999999999 89998653111 1111110000
Q ss_pred hhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHH
Q 011508 397 ERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLS 465 (484)
Q Consensus 397 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 465 (484)
.... ....+.++.+++.+|++.+|++||++.++.+.|+.
T Consensus 221 ---------~~~~---------------------~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 221 ---------RMPR---------------------PENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred ---------CCCC---------------------cccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 0000 11125578899999999999999999999999875
No 234
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=5e-38 Score=295.31 Aligned_cols=254 Identities=25% Similarity=0.369 Sum_probs=196.1
Q ss_pred CCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccc---------hHHHHHHHHHHHcCCCCCceeEeeeeeee
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGA---------SKSFIAECQALRSIRHRNLVKIITSCVSV 230 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~---------~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 230 (484)
+|.+...||+|++|.||+|... .++..+|+|.+....... .+.+.+|+.++++++||||+++++++.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~--~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-- 76 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNA--SSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSL-- 76 (267)
T ss_pred CccccceeecCCCeEEEEEEec--CCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEE--
Confidence 4778899999999999999843 356789999886543221 246788999999999999999999854
Q ss_pred ccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceE
Q 011508 231 DFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAH 310 (484)
Q Consensus 231 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~k 310 (484)
.....++|+||+++++|.+++... ..+++..+..++.|++.||+||| +.+++||||+|+||++++++.++
T Consensus 77 ---~~~~~~lv~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~~l~~~l~~lH---~~~ivH~di~p~nil~~~~~~~~ 146 (267)
T cd06628 77 ---DADHLNIFLEYVPGGSVAALLNNY----GAFEETLVRNFVRQILKGLNYLH---NRGIIHRDIKGANILVDNKGGIK 146 (267)
T ss_pred ---eCCccEEEEEecCCCCHHHHHHhc----cCccHHHHHHHHHHHHHHHHHHH---hcCcccccCCHHHEEEcCCCCEE
Confidence 345789999999999999999743 34788899999999999999999 89999999999999999999999
Q ss_pred EcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHH
Q 011508 311 VSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNF 390 (484)
Q Consensus 311 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~ 390 (484)
|+|||.++......... ..........++..|+|||.+.+..++.++||||+||++|+|++|+.||...... ..
T Consensus 147 l~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~----~~- 220 (267)
T cd06628 147 ISDFGISKKLEANSLST-KTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQL----QA- 220 (267)
T ss_pred ecccCCCcccccccccC-CccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHH----HH-
Confidence 99999998764321110 0011112245788999999998888999999999999999999999999753110 00
Q ss_pred HHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 391 VKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 391 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
+.. ......+.+ +..++..+.+++.+||+.||++||++.||++
T Consensus 221 ~~~-----~~~~~~~~~-----------------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 221 IFK-----IGENASPEI-----------------------PSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred HHH-----HhccCCCcC-----------------------CcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 000 000000000 1122567889999999999999999999976
No 235
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=4.6e-38 Score=294.94 Aligned_cols=258 Identities=21% Similarity=0.272 Sum_probs=202.2
Q ss_pred CCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC--ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH--RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
+|++.+.||.|+||.||+|... .++..+|+|.+.... ....+.+.+|++++++++|+|++++++++.. ..+..
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~--~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---~~~~~ 75 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRK--SDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIID---RSNQT 75 (265)
T ss_pred CceeeeeeccCCCeEEEEeeec--CCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeec---CCCCE
Confidence 4788899999999999999843 456789999987543 2234568889999999999999999987642 23456
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC--CCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYC--ETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~--~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
.+++|||+++++|.+++.........+++..++.++.|++.||+|||..+ +.+++|+||+|+||++++++.+||+|||
T Consensus 76 ~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g 155 (265)
T cd08217 76 LYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFG 155 (265)
T ss_pred EEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEeccc
Confidence 78999999999999999865544567999999999999999999999554 6789999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhc
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEAL 395 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 395 (484)
++........ ......++..|+|||.+.+..++.++||||||+++|+|++|+.||.... ........
T Consensus 156 ~~~~~~~~~~-------~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----~~~~~~~~- 222 (265)
T cd08217 156 LAKILGHDSS-------FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN-----QLQLASKI- 222 (265)
T ss_pred ccccccCCcc-------cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC-----HHHHHHHH-
Confidence 9987643221 1122358899999999988889999999999999999999999997532 11111110
Q ss_pred chhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 396 PERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 396 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
.+..... .+...+..+.+++.+|++.+|++||+++||++.
T Consensus 223 -------~~~~~~~--------------------~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 223 -------KEGKFRR--------------------IPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred -------hcCCCCC--------------------CccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 0000000 011225678999999999999999999999863
No 236
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=2e-38 Score=295.97 Aligned_cols=250 Identities=26% Similarity=0.356 Sum_probs=198.7
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCcee
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFE 238 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 238 (484)
++|++.+.||+|+||.||+|.... ++..+++|.+..... .+.+.+|++++++++|+|++++++++. .+...
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~--~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~-----~~~~~ 73 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKE--TGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYF-----KNTDL 73 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcC--CCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeee-----cCCcE
Confidence 678999999999999999999653 467899999875432 578999999999999999999999854 34588
Q ss_pred eEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccc
Q 011508 239 ALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAK 318 (484)
Q Consensus 239 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~ 318 (484)
++++||+++++|.+++... ...+++..++.++.|++.||+||| +.+++|+||+|+||+++.++.++|+|||++.
T Consensus 74 ~l~~e~~~~~~L~~~l~~~---~~~l~~~~~~~~~~~l~~~l~~lh---~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~ 147 (256)
T cd06612 74 WIVMEYCGAGSVSDIMKIT---NKTLTEEEIAAILYQTLKGLEYLH---SNKKIHRDIKAGNILLNEEGQAKLADFGVSG 147 (256)
T ss_pred EEEEecCCCCcHHHHHHhC---ccCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEECCCCcEEEcccccch
Confidence 9999999999999998643 245899999999999999999999 8899999999999999999999999999988
Q ss_pred ccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchh
Q 011508 319 FLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPER 398 (484)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 398 (484)
...... .......++..|+|||++.+..++.++||||||+++|+|++|+.||......... ..
T Consensus 148 ~~~~~~-------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~-----~~----- 210 (256)
T cd06612 148 QLTDTM-------AKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAI-----FM----- 210 (256)
T ss_pred hcccCc-------cccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhh-----hh-----
Confidence 663321 0112234788999999998888999999999999999999999998753211100 00
Q ss_pred hhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 399 LAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 399 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
......+.+. .+..+...+.+++.+|++.||++|||+.||++
T Consensus 211 ~~~~~~~~~~---------------------~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 211 IPNKPPPTLS---------------------DPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred hccCCCCCCC---------------------chhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 0000000000 01223457899999999999999999999985
No 237
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=1.3e-38 Score=301.47 Aligned_cols=254 Identities=22% Similarity=0.316 Sum_probs=199.0
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
.++|++.+.||.|+||.||+|.... ++..+|+|++........+.+.+|++++++++|+|++++++.+. .+..
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~--~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~ 76 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKE--TGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYF-----YENK 76 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcC--CCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEe-----cCCe
Confidence 4568899999999999999998543 56889999998665555678899999999999999999999854 3457
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
.++||||+++++|.+++... ...+++..+..++.|++.||.||| +.+|+|+||+|+||+++.++.++|+|||.+
T Consensus 77 ~~lv~e~~~~~~L~~~~~~~---~~~l~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~nili~~~~~~~l~d~g~~ 150 (280)
T cd06611 77 LWILIEFCDGGALDSIMLEL---ERGLTEPQIRYVCRQMLEALNFLH---SHKVIHRDLKAGNILLTLDGDVKLADFGVS 150 (280)
T ss_pred EEEEeeccCCCcHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEECCCCCEEEccCccc
Confidence 89999999999999998743 235899999999999999999999 899999999999999999999999999988
Q ss_pred cccccccccCCCCccccccccccccccCccccC-----CCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHH
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGM-----GSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVK 392 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 392 (484)
....... .......++..|+|||.+. ...++.++||||||+++|||++|+.||....... .+..+.
T Consensus 151 ~~~~~~~-------~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~-~~~~~~- 221 (280)
T cd06611 151 AKNKSTL-------QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMR-VLLKIL- 221 (280)
T ss_pred hhhcccc-------cccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHH-HHHHHh-
Confidence 7543211 1122345888999999864 3457889999999999999999999986532110 000000
Q ss_pred hhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 393 EALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 393 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
....+.+.. +..+..++.+++..||+.+|++||++.+|++.
T Consensus 222 --------~~~~~~~~~---------------------~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 222 --------KSEPPTLDQ---------------------PSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred --------cCCCCCcCC---------------------cccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 000000000 12235578899999999999999999999865
No 238
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=3.1e-38 Score=299.65 Aligned_cols=275 Identities=22% Similarity=0.277 Sum_probs=194.3
Q ss_pred CCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
+|++.+.||+|++|.||+|+.. .++..||+|.++.... ...+.+.+|+.++++++|||++++++++. .+..
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~--~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~ 73 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNK--KTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLM-----QESR 73 (285)
T ss_pred CceEeeEecccCceEEEEEEEC--CCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEe-----eCCe
Confidence 4788899999999999999843 4567899999865432 23467889999999999999999999854 3458
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
.++||||++ ++|.+++..... ...+++..++.++.|++.||+||| +++++||||||+||+++.++.+||+|||++
T Consensus 74 ~~~v~e~~~-~~l~~~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~ 148 (285)
T cd07861 74 LYLIFEFLS-MDLKKYLDSLPK-GQYMDAELVKSYLYQILQGILFCH---SRRVLHRDLKPQNLLIDNKGVIKLADFGLA 148 (285)
T ss_pred EEEEEecCC-CCHHHHHhcCCC-CCcCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCCHHHEEEcCCCcEEECcccce
Confidence 899999996 689988864332 346899999999999999999999 899999999999999999999999999998
Q ss_pred cccccccccCCCCccccccccccccccCccccCC-CCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcc
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALP 396 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 396 (484)
....... .......++..|+|||.+.+ ..++.++|||||||++|+|+||+.||....... ...........
T Consensus 149 ~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~-~~~~~~~~~~~ 220 (285)
T cd07861 149 RAFGIPV-------RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEID-QLFRIFRILGT 220 (285)
T ss_pred eecCCCc-------ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHHhCC
Confidence 7543211 11122346889999998765 457889999999999999999999997532111 00000000000
Q ss_pred --hh-hhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 397 --ER-LAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 397 --~~-~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
+. .....+ + .+.... ...............+..++.+++.+||+.||++|||+.+|++
T Consensus 221 ~~~~~~~~~~~--~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 221 PTEDVWPGVTS--L-PDYKNT----FPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred CChhhhhcchh--h-HHHHhh----ccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 00 000000 0 000000 0000000000001123567889999999999999999999975
No 239
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.7e-38 Score=301.31 Aligned_cols=266 Identities=23% Similarity=0.289 Sum_probs=201.7
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
++|++.+.||+|+||+||++... .+++.||+|++..... ...+.+.+|+++++.++||||+++++++.. ...
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~--~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~~ 77 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHI--PTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLN-----ENN 77 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEc--CCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEec-----CCE
Confidence 46788899999999999999854 3567899998865432 334678899999999999999999999643 358
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
.++||||+++++|.+++... ..+++..+..++.+++.+|.|||+ ..+++||||+|+||++++++.++|+|||++
T Consensus 78 ~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~d~gl~ 151 (284)
T cd06620 78 ICMCMEFMDCGSLDRIYKKG----GPIPVEILGKIAVAVVEGLTYLYN--VHRIMHRDIKPSNILVNSRGQIKLCDFGVS 151 (284)
T ss_pred EEEEEecCCCCCHHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHH--hcCeeccCCCHHHEEECCCCcEEEccCCcc
Confidence 89999999999999988642 358899999999999999999994 368999999999999999999999999988
Q ss_pred cccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcch
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPE 397 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 397 (484)
....... .....++..|+|||++.+..++.++|||||||++|++++|+.||......... ...+.
T Consensus 152 ~~~~~~~---------~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~------~~~~~ 216 (284)
T cd06620 152 GELINSI---------ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDG------QDDPM 216 (284)
T ss_pred cchhhhc---------cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhh------hhhhh
Confidence 6542211 11245889999999988888999999999999999999999999764322110 00000
Q ss_pred hhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHH
Q 011508 398 RLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFR 467 (484)
Q Consensus 398 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~ 467 (484)
.+.+.+........ ......+++..+.+++.+|++.||++|||+.||++...-++
T Consensus 217 ~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~ 271 (284)
T cd06620 217 GILDLLQQIVQEPP---------------PRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQ 271 (284)
T ss_pred HHHHHHHHHhhccC---------------CCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCccccc
Confidence 01111111000000 00001224567899999999999999999999998754443
No 240
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=2.7e-38 Score=302.48 Aligned_cols=278 Identities=22% Similarity=0.283 Sum_probs=196.2
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
++|.+.+.||+|+||.||+|+.. .++..||+|.++.... .....+.+|+.+++.++|+||+++++++. ....
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~-----~~~~ 78 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSK--LTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIH-----TEKS 78 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEc--CCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEe-----cCCe
Confidence 57899999999999999999843 4568899999875432 23456788999999999999999999853 4457
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
.++||||++ ++|.+++... ...+++..+..++.|++.||+||| +.+|+|+||||+||+++.++.+||+|||++
T Consensus 79 ~~lv~e~~~-~~l~~~l~~~---~~~~~~~~~~~~~~qi~~aL~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~ 151 (301)
T cd07873 79 LTLVFEYLD-KDLKQYLDDC---GNSINMHNVKLFLFQLLRGLNYCH---RRKVLHRDLKPQNLLINERGELKLADFGLA 151 (301)
T ss_pred EEEEEeccc-cCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHHHEEECCCCcEEECcCcch
Confidence 899999996 6999888643 235789999999999999999999 899999999999999999999999999998
Q ss_pred cccccccccCCCCccccccccccccccCccccCC-CCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcc
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALP 396 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 396 (484)
....... .......++..|+|||.+.+ ..++.++|||||||++|||+||+.||...... .....+.....
T Consensus 152 ~~~~~~~-------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~--~~~~~~~~~~~ 222 (301)
T cd07873 152 RAKSIPT-------KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVE--EQLHFIFRILG 222 (301)
T ss_pred hccCCCC-------CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHcC
Confidence 7543211 11122346889999998765 45788999999999999999999999753211 11111111111
Q ss_pred hhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 397 ERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 397 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
..........+..+..... ................+...+.+++.+|++.||.+|||++|+++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 223 TPTEETWPGILSNEEFKSY--NYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred CCChhhchhhhcccccccc--ccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 1111111000000000000 00000000000001223557889999999999999999999986
No 241
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=8.2e-38 Score=292.09 Aligned_cols=252 Identities=25% Similarity=0.310 Sum_probs=197.3
Q ss_pred CCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
+|++.+.||+|++|.||++... .+++.||+|.+..... ...+.+.+|++++++++|+|++++++.+. ..+..
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~--~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~----~~~~~ 74 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHR--TDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWE----GEDGL 74 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEc--CCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeec----CCCCE
Confidence 4888999999999999999954 3467899999875432 23456889999999999999999988642 23346
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
.++||||+++++|.+++.... ...+++.+++.++.|++.|+++|| +.+++||||||+||+++.++.++|+|||++
T Consensus 75 ~~lv~e~~~~~~l~~~l~~~~--~~~l~~~~~~~~~~~l~~~l~~lH---~~~i~H~di~p~nil~~~~~~~~l~df~~~ 149 (257)
T cd08223 75 LYIVMGFCEGGDLYHKLKEQK--GKLLPENQVVEWFVQIAMALQYLH---EKHILHRDLKTQNVFLTRTNIIKVGDLGIA 149 (257)
T ss_pred EEEEecccCCCcHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCchhEEEecCCcEEEecccce
Confidence 789999999999999997532 345899999999999999999999 899999999999999999999999999998
Q ss_pred cccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcch
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPE 397 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 397 (484)
....... .......++..|+|||+..+..++.++||||||+++++|++|+.||.... ...........
T Consensus 150 ~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~-----~~~~~~~~~~~ 217 (257)
T cd08223 150 RVLENQC-------DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKD-----MNSLVYRIIEG 217 (257)
T ss_pred EEecccC-------CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC-----HHHHHHHHHhc
Confidence 7653221 11223457889999999999899999999999999999999999986421 11111111000
Q ss_pred hhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 398 RLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 398 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
. .. .+ +.....++.+++.+|++.+|++|||+.++++.
T Consensus 218 ~----~~-~~-----------------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 218 K----LP-PM-----------------------PKDYSPELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred C----CC-CC-----------------------ccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0 00 00 11225678899999999999999999999753
No 242
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=4.1e-38 Score=297.04 Aligned_cols=250 Identities=28% Similarity=0.368 Sum_probs=198.3
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC-ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH-RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
++|++.+.||.|++|.||+|+.. .++..||+|.+.... ......+.+|+++++.++|+|++++++++.. +..
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~--~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~ 73 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDK--RTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLK-----GSK 73 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEEC--CCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEE-----CCe
Confidence 36888899999999999999854 357889999987553 2334678899999999999999999998543 358
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
.++|+||+++++|.+++... .+++..++.++.|++.|+.||| +++++|+||+|+||++++++.++|+|||.+
T Consensus 74 ~~~v~e~~~~~~L~~~~~~~-----~~~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~ 145 (274)
T cd06609 74 LWIIMEYCGGGSCLDLLKPG-----KLDETYIAFILREVLLGLEYLH---EEGKIHRDIKAANILLSEEGDVKLADFGVS 145 (274)
T ss_pred EEEEEEeeCCCcHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEcccccc
Confidence 89999999999999998742 5899999999999999999999 899999999999999999999999999999
Q ss_pred cccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcch
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPE 397 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 397 (484)
+...... .......++..|+|||++.+..++.++||||||+++|+|+||+.||...... ..... .
T Consensus 146 ~~~~~~~-------~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~-----~~~~~-~-- 210 (274)
T cd06609 146 GQLTSTM-------SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPM-----RVLFL-I-- 210 (274)
T ss_pred eeecccc-------cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchH-----HHHHH-h--
Confidence 8764321 1112245788899999998888999999999999999999999999653211 00000 0
Q ss_pred hhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 398 RLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 398 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
.....+.+. ...++..+.+++.+||..+|++|||++++++.
T Consensus 211 --~~~~~~~~~----------------------~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~ 251 (274)
T cd06609 211 --PKNNPPSLE----------------------GNKFSKPFKDFVSLCLNKDPKERPSAKELLKH 251 (274)
T ss_pred --hhcCCCCCc----------------------ccccCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 000000000 00024568899999999999999999999763
No 243
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=5.3e-38 Score=296.10 Aligned_cols=265 Identities=27% Similarity=0.440 Sum_probs=199.9
Q ss_pred CCccCccccccceeEEEEEEcC-CCCeeEEEEEEeeccC--ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCC-Cc
Q 011508 161 FSLENLIGAGSFGSVYKGIFDH-DDHETLVAVKVLNLQH--RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQG-ND 236 (484)
Q Consensus 161 ~~~~~~lg~G~~g~Vy~~~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~-~~ 236 (484)
|.+.+.||+|+||.||+|.+.. ..++..||+|++.... ....+++.+|++++++++|||++++++++......+ ..
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 5677899999999999998653 3456889999987543 223467889999999999999999999865432111 12
Q ss_pred eeeEEeecccCCCHHHHHhhcC--CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEccc
Q 011508 237 FEALVYELMVNGSLEEWLHLNR--DAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDF 314 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 314 (484)
..++++||+.+|+|.+++.... .....+++...+.++.|++.||+||| +.+|+||||||+||++++++.+||+||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLS---SKNFIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccchhhEEEcCCCCEEECcc
Confidence 3478899999999998875332 12235789999999999999999999 899999999999999999999999999
Q ss_pred CcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHh
Q 011508 315 GLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKE 393 (484)
Q Consensus 315 g~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~ 393 (484)
|.++....... ........++..|++||.+....++.++|||||||++|||++ |+.||...... ....++..
T Consensus 158 g~~~~~~~~~~-----~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~--~~~~~~~~ 230 (273)
T cd05074 158 GLSKKIYSGDY-----YRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENS--EIYNYLIK 230 (273)
T ss_pred cccccccCCcc-----eecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHH--HHHHHHHc
Confidence 99886532211 011112335678999999988889999999999999999999 88888643211 11111110
Q ss_pred hcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHH
Q 011508 394 ALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSF 466 (484)
Q Consensus 394 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i 466 (484)
. ..+.. +..++..+.+++.+|++.+|++||++.|+++.|+.+
T Consensus 231 ~----------~~~~~---------------------~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 231 G----------NRLKQ---------------------PPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred C----------CcCCC---------------------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 0 00000 112256789999999999999999999999999876
No 244
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.2e-38 Score=309.74 Aligned_cols=194 Identities=25% Similarity=0.391 Sum_probs=161.6
Q ss_pred HhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 156 KATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 156 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
....+|++.+.||+|+||.||+|+.. .++..||+|+.... ....|+.++++++|+||+++++++.. .
T Consensus 63 ~~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~-----~ 129 (357)
T PHA03209 63 VASLGYTVIKTLTPGSEGRVFVATKP--GQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVS-----G 129 (357)
T ss_pred hhhcCcEEEEEecCCCCeEEEEEEEC--CCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEe-----C
Confidence 34467999999999999999999954 35678999975322 23569999999999999999998643 3
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
...++|+|++ .++|.+++... ...+++..++.|+.||+.||+||| +++|+||||||+||+++.++.+||+|||
T Consensus 130 ~~~~lv~e~~-~~~l~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG 202 (357)
T PHA03209 130 AITCMVLPHY-SSDLYTYLTKR---SRPLPIDQALIIEKQILEGLRYLH---AQRIIHRDVKTENIFINDVDQVCIGDLG 202 (357)
T ss_pred CeeEEEEEcc-CCcHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEecCc
Confidence 4789999999 57898888643 345899999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCC
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPT 377 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~ 377 (484)
.++..... .......||..|+|||++.+..++.++|||||||++|||+++..|+
T Consensus 203 ~a~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 203 AAQFPVVA--------PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred cccccccC--------cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 98753211 1122346899999999999999999999999999999999965544
No 245
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=2.6e-38 Score=297.61 Aligned_cols=254 Identities=28% Similarity=0.439 Sum_probs=194.2
Q ss_pred CccccccceeEEEEEEcCC----CCeeEEEEEEeeccC-ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCceee
Q 011508 165 NLIGAGSFGSVYKGIFDHD----DHETLVAVKVLNLQH-RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFEA 239 (484)
Q Consensus 165 ~~lg~G~~g~Vy~~~~~~~----~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 239 (484)
+.||+|+||.||+|+..+. ..+..+|+|.+.... ......+.+|+.+++.++||||+++++++. .....+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 75 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCL-----LNEPQY 75 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeec-----CCCCeE
Confidence 4699999999999986532 233679999876543 234567889999999999999999999864 344789
Q ss_pred EEeecccCCCHHHHHhhcCC---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCC-----ceEE
Q 011508 240 LVYELMVNGSLEEWLHLNRD---APRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGEL-----TAHV 311 (484)
Q Consensus 240 lv~e~~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~-----~~kl 311 (484)
+||||+++++|.+++..... ....+++.+++.++.|++.||+||| +.+++|+||||+||+++.+. .++|
T Consensus 76 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~~~~~~l 152 (269)
T cd05044 76 IIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLE---QMHFIHRDLAARNCLVSEKGYDADRVVKI 152 (269)
T ss_pred EEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHH---hCCcccCCCChheEEEecCCCCCCcceEE
Confidence 99999999999999975432 2234789999999999999999999 89999999999999999877 8999
Q ss_pred cccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHH
Q 011508 312 SDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNF 390 (484)
Q Consensus 312 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~ 390 (484)
+|||++......... .......++..|+|||++.+..++.++|||||||++|||++ |+.||...... .....
T Consensus 153 ~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~--~~~~~ 225 (269)
T cd05044 153 GDFGLARDIYKSDYY-----RKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQ--EVLQH 225 (269)
T ss_pred CCccccccccccccc-----ccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHH--HHHHH
Confidence 999998765322110 11112245678999999999999999999999999999998 99998643111 11111
Q ss_pred HHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHH
Q 011508 391 VKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLL 464 (484)
Q Consensus 391 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 464 (484)
+.. . .... .+..++..+.+++.+||+.+|++||++.+|++.|+
T Consensus 226 ~~~---~-------~~~~---------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 226 VTA---G-------GRLQ---------------------KPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred Hhc---C-------CccC---------------------CcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 000 0 0000 01223567899999999999999999999999886
No 246
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.9e-38 Score=316.29 Aligned_cols=196 Identities=28% Similarity=0.388 Sum_probs=164.2
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
..+|.+.+.||+|+||.||+|... ..++.||||... ...+.+|++++++++|+||+++++++.. +..
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~--~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~-----~~~ 234 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHP--DYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVV-----GGL 234 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEEC--CCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEE-----CCE
Confidence 457999999999999999999854 356789999642 2346789999999999999999998643 347
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
.++|||++ .++|.+++... ...+++.+++.|+.|++.||+||| +++|+||||||+|||++.++.+||+|||++
T Consensus 235 ~~lv~e~~-~~~L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDLKP~NILl~~~~~vkL~DFGla 307 (461)
T PHA03211 235 TCLVLPKY-RSDLYTYLGAR---LRPLGLAQVTAVARQLLSAIDYIH---GEGIIHRDIKTENVLVNGPEDICLGDFGAA 307 (461)
T ss_pred EEEEEEcc-CCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHH---HCCEEECcCCHHHEEECCCCCEEEcccCCc
Confidence 89999999 57999888643 235899999999999999999999 899999999999999999999999999999
Q ss_pred cccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCC
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTN 378 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~ 378 (484)
+....... ........||..|+|||++.+..++.++|||||||++|||++|..|+.
T Consensus 308 ~~~~~~~~-----~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf 363 (461)
T PHA03211 308 CFARGSWS-----TPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLF 363 (461)
T ss_pred eecccccc-----cccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcc
Confidence 86533211 111223569999999999999999999999999999999999887653
No 247
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=7.2e-38 Score=294.04 Aligned_cols=254 Identities=24% Similarity=0.292 Sum_probs=191.8
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc-----cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR-----GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQ 233 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 233 (484)
.+|+..+.||+|+||.||+|... .++..|++|.+..... .....+.+|+.++++++||||+++++++.. .
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~--~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~ 76 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDV--DTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRD---R 76 (266)
T ss_pred CCccccceecCCCCEEEEEEEEc--CCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEc---C
Confidence 46889999999999999999843 4577899998864321 223568889999999999999999987532 2
Q ss_pred CCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcc
Q 011508 234 GNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSD 313 (484)
Q Consensus 234 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~D 313 (484)
.+...++++||+++++|.+++... ..+++..++.++.|++.||+||| +.+|+||||+|+||+++.++.+||+|
T Consensus 77 ~~~~~~l~~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~qi~~~l~~LH---~~~i~H~~l~p~nil~~~~~~~~l~d 149 (266)
T cd06651 77 AEKTLTIFMEYMPGGSVKDQLKAY----GALTESVTRKYTRQILEGMSYLH---SNMIVHRDIKGANILRDSAGNVKLGD 149 (266)
T ss_pred CCCEEEEEEeCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEcc
Confidence 235678999999999999999743 24789999999999999999999 89999999999999999999999999
Q ss_pred cCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHh
Q 011508 314 FGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKE 393 (484)
Q Consensus 314 fg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 393 (484)
||++......... ........++..|+|||++.+..++.++|||||||++|||++|+.||...... ..+..
T Consensus 150 fg~~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~-----~~~~~ 220 (266)
T cd06651 150 FGASKRLQTICMS----GTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAM-----AAIFK 220 (266)
T ss_pred CCCcccccccccc----CCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchH-----HHHHH
Confidence 9998765321110 11112245788999999998888999999999999999999999999653111 00100
Q ss_pred hcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 394 ALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 394 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
... ....+.+ +..+...+.+++ .||..+|++||+++||++
T Consensus 221 ~~~----~~~~~~~-----------------------~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 221 IAT----QPTNPQL-----------------------PSHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred Hhc----CCCCCCC-----------------------chhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 000 0000000 111133455566 688899999999999975
No 248
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=5e-38 Score=297.94 Aligned_cols=253 Identities=25% Similarity=0.317 Sum_probs=191.4
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc-cchHHHHHHHHH-HHcCCCCCceeEeeeeeeeccCCCc
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR-GASKSFIAECQA-LRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~-l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
++|++.+.||+|+||.||+|+. ..+++.||+|+++.... .....+..|+.. ++.++|||++++++++. .+.
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~--~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~-----~~~ 73 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRH--VPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALF-----REG 73 (283)
T ss_pred CCceEEEEecccCCeEEEEEEE--cCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEe-----cCC
Confidence 4688899999999999999984 44678999999875432 223455566665 56679999999999864 344
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CeeecCCCCCCeeecCCCceEEcccC
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCET-PIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
..++||||++ |+|.+++.........+++..++.++.|++.||+||| ++ +++||||||+||+++.++.+||+|||
T Consensus 74 ~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~~i~h~dlkp~nil~~~~~~~kl~dfg 149 (283)
T cd06617 74 DVWICMEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLH---SKLSVIHRDVKPSNVLINRNGQVKLCDFG 149 (283)
T ss_pred cEEEEhhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeecc
Confidence 7899999995 7898888754444456899999999999999999999 76 99999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCC----CCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHH
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG----SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFV 391 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~----~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 391 (484)
.+....... ......++..|+|||.+.+ ..++.++|+|||||++|+|++|+.||.........+....
T Consensus 150 ~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~ 221 (283)
T cd06617 150 ISGYLVDSV--------AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVV 221 (283)
T ss_pred ccccccccc--------ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHH
Confidence 987653211 1112357888999998765 4568899999999999999999999864221111111100
Q ss_pred HhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 392 KEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 392 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
. -..+.+. ...++.++.+++..||..+|++||++.++++
T Consensus 222 ~---------~~~~~~~----------------------~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 222 E---------EPSPQLP----------------------AEKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred h---------cCCCCCC----------------------ccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 0000000 1112567899999999999999999999986
No 249
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=7.8e-38 Score=295.59 Aligned_cols=248 Identities=24% Similarity=0.323 Sum_probs=197.4
Q ss_pred CCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC-ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCcee
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH-RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFE 238 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 238 (484)
.|+..+.||.|+||.||+|... .++..||+|.+.... ......+.+|+.+++.++|+||+++++++.. +...
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~ 77 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDN--RTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLK-----GTKL 77 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEc--cCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE-----CCEE
Confidence 4677889999999999999844 356889999987543 2344678899999999999999999998643 4588
Q ss_pred eEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccc
Q 011508 239 ALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAK 318 (484)
Q Consensus 239 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~ 318 (484)
++||||+++++|.+++.. ..+++.++..++.|++.||+||| +.+++|+||+|+||+++.++.++|+|||++.
T Consensus 78 ~lv~e~~~~~~L~~~i~~-----~~l~~~~~~~~~~~l~~~l~~lh---~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~ 149 (277)
T cd06640 78 WIIMEYLGGGSALDLLRA-----GPFDEFQIATMLKEILKGLDYLH---SEKKIHRDIKAANVLLSEQGDVKLADFGVAG 149 (277)
T ss_pred EEEEecCCCCcHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCccCcCCChhhEEEcCCCCEEEcccccce
Confidence 999999999999999863 24788999999999999999999 8999999999999999999999999999987
Q ss_pred ccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchh
Q 011508 319 FLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPER 398 (484)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 398 (484)
...... .......++..|+|||++.+..++.++|+|||||++|||+||+.||........ .
T Consensus 150 ~~~~~~-------~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~-----~------- 210 (277)
T cd06640 150 QLTDTQ-------IKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRV-----L------- 210 (277)
T ss_pred eccCCc-------cccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhH-----h-------
Confidence 653221 111223578889999999888899999999999999999999999865321110 0
Q ss_pred hhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 399 LAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 399 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
..+...... .....++..+.+++..||+.+|++||++.+++..
T Consensus 211 --~~~~~~~~~-------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 211 --FLIPKNNPP-------------------TLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred --hhhhcCCCC-------------------CCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 000000000 0023346778999999999999999999999876
No 250
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.3e-39 Score=302.81 Aligned_cols=254 Identities=22% Similarity=0.326 Sum_probs=195.6
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC--ccchHHHHHHHHHHHcC-CCCCceeEeeeeeeeccCC
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH--RGASKSFIAECQALRSI-RHRNLVKIITSCVSVDFQG 234 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 234 (484)
...|++.++||.||.+.||++... +.+.+|+|++.... ......|.+|+..|.+| .|.+||++++|-. .
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s---~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv-----~ 431 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNS---DKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEV-----T 431 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecC---CCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeec-----c
Confidence 356899999999999999999844 34667877665332 33456799999999999 6999999999954 3
Q ss_pred CceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEccc
Q 011508 235 NDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDF 314 (484)
Q Consensus 235 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 314 (484)
+++.|+||||- ..+|..+|+..... +....+..+..|++.++.++| .++|||.||||.|+|+- .|.+||+||
T Consensus 432 d~~lYmvmE~G-d~DL~kiL~k~~~~---~~~~~lk~ywkqML~aV~~IH---~~gIVHSDLKPANFLlV-kG~LKLIDF 503 (677)
T KOG0596|consen 432 DGYLYMVMECG-DIDLNKILKKKKSI---DPDWFLKFYWKQMLLAVKTIH---QHGIVHSDLKPANFLLV-KGRLKLIDF 503 (677)
T ss_pred CceEEEEeecc-cccHHHHHHhccCC---CchHHHHHHHHHHHHHHHHHH---HhceeecCCCcccEEEE-eeeEEeeee
Confidence 56999999987 67999999865432 332378889999999999999 99999999999999987 468999999
Q ss_pred CcccccccccccCCCCccccccccccccccCccccCCC-----------CCCcccceehhhHHHHHHHhCCCCCCCCccC
Q 011508 315 GLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGS-----------EVSTSGDVYSFGILLLEMFTGKGPTNEMFTG 383 (484)
Q Consensus 315 g~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-----------~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~ 383 (484)
|.|..+..+.... .....+||+.||+||.+... +.+.++||||+|||||+|+.|+.||.....
T Consensus 504 GIA~aI~~DTTsI-----~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n- 577 (677)
T KOG0596|consen 504 GIANAIQPDTTSI-----VKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIIN- 577 (677)
T ss_pred chhcccCccccce-----eeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHH-
Confidence 9999886654332 23346899999999976543 256899999999999999999999975211
Q ss_pred CccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 384 NLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
.| .++..+.|+.-.-++.... . ..++++++..||++||++|||..|+++.
T Consensus 578 -----~~------aKl~aI~~P~~~Iefp~~~---------------~---~~~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 578 -----QI------AKLHAITDPNHEIEFPDIP---------------E---NDELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred -----HH------HHHHhhcCCCccccccCCC---------------C---chHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 11 2244555553322221100 0 3348999999999999999999999853
No 251
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=6.4e-38 Score=292.66 Aligned_cols=251 Identities=29% Similarity=0.459 Sum_probs=195.5
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCcee
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFE 238 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 238 (484)
.+|++.+.||+|+||.||+|.+. .+..+|+|.+.... .....+.+|++++++++|||++++++++ ......
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~---~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~ 74 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWL---EKRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVC-----TERSPI 74 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEe---CCCeEEEEECCCCC-CCHHHHHHHHHHHHhCCCCCeeeEEEEE-----ccCCce
Confidence 46788899999999999999865 34679999886433 2346789999999999999999999985 344578
Q ss_pred eEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccc
Q 011508 239 ALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAK 318 (484)
Q Consensus 239 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~ 318 (484)
++||||+++++|.+++.... ..+++..++.++.|++.+++||| +.+++|+||||+||+++.++.++|+|||.+.
T Consensus 75 ~~v~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lH---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~ 148 (256)
T cd05112 75 CLVFEFMEHGCLSDYLRAQR---GKFSQETLLGMCLDVCEGMAYLE---SSNVIHRDLAARNCLVGENQVVKVSDFGMTR 148 (256)
T ss_pred EEEEEcCCCCcHHHHHHhCc---cCCCHHHHHHHHHHHHHHHHHHH---HCCccccccccceEEEcCCCeEEECCCccee
Confidence 99999999999999987432 34789999999999999999999 8999999999999999999999999999987
Q ss_pred ccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhhcch
Q 011508 319 FLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEALPE 397 (484)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 397 (484)
...... ........++..|+|||...+..++.++||||||+++|||++ |+.||..... .......
T Consensus 149 ~~~~~~------~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-----~~~~~~~--- 214 (256)
T cd05112 149 FVLDDQ------YTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSN-----SEVVETI--- 214 (256)
T ss_pred ecccCc------ccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCH-----HHHHHHH---
Confidence 553221 011112235678999999988889999999999999999998 9999865321 1111110
Q ss_pred hhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHH
Q 011508 398 RLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQL 463 (484)
Q Consensus 398 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 463 (484)
.+.... . .+...+..+.+++.+||+.+|++|||+.|++++|
T Consensus 215 --~~~~~~-~----------------------~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 215 --NAGFRL-Y----------------------KPRLASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred --hCCCCC-C----------------------CCCCCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 000000 0 0011145789999999999999999999999887
No 252
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8.7e-39 Score=314.15 Aligned_cols=259 Identities=28% Similarity=0.432 Sum_probs=210.2
Q ss_pred CccCccccccceeEEEEEEcCCCC--eeEEEEEEeeccC-ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCcee
Q 011508 162 SLENLIGAGSFGSVYKGIFDHDDH--ETLVAVKVLNLQH-RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFE 238 (484)
Q Consensus 162 ~~~~~lg~G~~g~Vy~~~~~~~~~--~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 238 (484)
...++||+|+||+||+|.|--++. ..+||+|++.... .....++.+|+-+|.+++|||+++++++|... ..
T Consensus 699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s------~~ 772 (1177)
T KOG1025|consen 699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLS------TL 772 (1177)
T ss_pred hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccc------hH
Confidence 445789999999999999854432 3579999986443 34567899999999999999999999998643 36
Q ss_pred eEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccc
Q 011508 239 ALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAK 318 (484)
Q Consensus 239 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~ 318 (484)
.||++||+.|+|.+|++.+++ ++.....+.|..|||+|+.||| .+++|||||..+|||+.....+||.|||+++
T Consensus 773 qlvtq~mP~G~LlDyvr~hr~---~igsq~lLnw~~QIAkgM~YLe---~qrlVHrdLaaRNVLVksP~hvkitdfgla~ 846 (1177)
T KOG1025|consen 773 QLVTQLMPLGCLLDYVREHRD---NIGSQDLLNWCYQIAKGMKYLE---EQRLVHRDLAARNVLVKSPNHVKITDFGLAK 846 (1177)
T ss_pred HHHHHhcccchHHHHHHHhhc---cccHHHHHHHHHHHHHHHHHHH---hcchhhhhhhhhheeecCCCeEEEEecchhh
Confidence 799999999999999997553 5888999999999999999999 9999999999999999999999999999999
Q ss_pred ccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhhcch
Q 011508 319 FLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEALPE 397 (484)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 397 (484)
.+..+...... ....-.+.|+|=|.+....++.++|||||||++||++| |..|+++...++
T Consensus 847 ll~~d~~ey~~-----~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~e------------- 908 (1177)
T KOG1025|consen 847 LLAPDEKEYSA-----PGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEE------------- 908 (1177)
T ss_pred ccCcccccccc-----cccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHH-------------
Confidence 98765533222 12335678999999999999999999999999999999 999987642221
Q ss_pred hhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHHHH
Q 011508 398 RLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRNKL 470 (484)
Q Consensus 398 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~ 470 (484)
+.+++..- .+-..++-|...+..++.+||..|+..||+++++.++..++....
T Consensus 909 -I~dlle~g-------------------eRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ardp 961 (1177)
T KOG1025|consen 909 -IPDLLEKG-------------------ERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARDP 961 (1177)
T ss_pred -hhHHHhcc-------------------ccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcCc
Confidence 11111100 011116678889999999999999999999999999998875443
No 253
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=6.8e-38 Score=294.04 Aligned_cols=255 Identities=23% Similarity=0.331 Sum_probs=195.3
Q ss_pred CCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc------cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccC
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR------GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQ 233 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 233 (484)
+|.+.+.||+|+||.||+|... ++..+|+|.+..... .....+.+|++++++++|+||+++++++.
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~---~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~----- 72 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTN---QGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCL----- 72 (265)
T ss_pred CccccceEeccCCeEEEEEEEc---CCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEee-----
Confidence 4778899999999999999753 567899998875432 12246888999999999999999999864
Q ss_pred CCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcc
Q 011508 234 GNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSD 313 (484)
Q Consensus 234 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~D 313 (484)
.....++|+||+++++|.+++... ..+++..+..++.|++.||+||| +.+|+|+||+|+||++++++.++|+|
T Consensus 73 ~~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~l~d 145 (265)
T cd06631 73 DDNTISIFMEFVPGGSISSILNRF----GPLPEPVFCKYTKQILDGVAYLH---NNCVVHRDIKGNNVMLMPNGIIKLID 145 (265)
T ss_pred cCCeEEEEEecCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcCHHhEEECCCCeEEecc
Confidence 345889999999999999999743 24789999999999999999999 88999999999999999999999999
Q ss_pred cCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHh
Q 011508 314 FGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKE 393 (484)
Q Consensus 314 fg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 393 (484)
||.+........... .........++..|+|||+..+..++.++||||||+++|+|++|+.||...... ......
T Consensus 146 fg~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~----~~~~~~ 220 (265)
T cd06631 146 FGCARRLAWVGLHGT-HSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRL----AAMFYI 220 (265)
T ss_pred chhhHhhhhcccccc-ccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChH----HHHHHh
Confidence 999876532111110 111122345889999999999888999999999999999999999999653111 000000
Q ss_pred hcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 394 ALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 394 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
... .. ..+.+ +..+..++.+++.+||+.+|++||++.|+++
T Consensus 221 ~~~---~~-~~~~~-----------------------~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 221 GAH---RG-LMPRL-----------------------PDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred hhc---cC-CCCCC-----------------------CCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 000 00 00000 1122557889999999999999999999875
No 254
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=4.6e-38 Score=298.01 Aligned_cols=266 Identities=23% Similarity=0.307 Sum_probs=203.6
Q ss_pred ccHHhHHHhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcC-CCCCceeEeeee
Q 011508 149 VSYQNLFKATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSI-RHRNLVKIITSC 227 (484)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~ 227 (484)
.+..++....+.|++.+.||+|+||.||+|... .++..+|+|++.... .....+..|+.+++++ +|+|++++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~ 82 (282)
T cd06636 6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHV--KTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAF 82 (282)
T ss_pred hhhhhhcChhhhhhhheeeccCCCeEEEEEEEc--CCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeeh
Confidence 345566667789999999999999999999954 356789999986543 2335688899999998 799999999987
Q ss_pred eeecc-CCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCC
Q 011508 228 VSVDF-QGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGE 306 (484)
Q Consensus 228 ~~~~~-~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~ 306 (484)
..... ......+++|||+++|+|.+++.... ...+++..++.++.|++.||+||| +.+|+|+||+|+||+++++
T Consensus 83 ~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH---~~~ivH~dl~~~nili~~~ 157 (282)
T cd06636 83 IKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTK--GNALKEDWIAYICREILRGLAHLH---AHKVIHRDIKGQNVLLTEN 157 (282)
T ss_pred hcccccCCCCEEEEEEEeCCCCcHHHHHHHcc--CCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCC
Confidence 54321 23457899999999999999997543 234788889999999999999999 8999999999999999999
Q ss_pred CceEEcccCcccccccccccCCCCccccccccccccccCccccC-----CCCCCcccceehhhHHHHHHHhCCCCCCCCc
Q 011508 307 LTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGM-----GSEVSTSGDVYSFGILLLEMFTGKGPTNEMF 381 (484)
Q Consensus 307 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~ 381 (484)
+.++|+|||.+....... .......++..|+|||.+. ...++.++|||||||++|||++|+.||....
T Consensus 158 ~~~~l~dfg~~~~~~~~~-------~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~ 230 (282)
T cd06636 158 AEVKLVDFGVSAQLDRTV-------GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMH 230 (282)
T ss_pred CCEEEeeCcchhhhhccc-------cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccC
Confidence 999999999987553211 1122345889999999875 3467889999999999999999999996532
Q ss_pred cCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 382 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
.... ... ......+. .....++.++.+++.+||+.||.+|||+.|+++
T Consensus 231 ~~~~----~~~------~~~~~~~~----------------------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 231 PMRA----LFL------IPRNPPPK----------------------LKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred HHhh----hhh------HhhCCCCC----------------------CcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 1100 000 00000000 001223567899999999999999999999875
No 255
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-38 Score=291.22 Aligned_cols=272 Identities=24% Similarity=0.342 Sum_probs=207.2
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcC--CCCCceeEeeeeeeeccCCCc
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSI--RHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l--~h~niv~~~~~~~~~~~~~~~ 236 (484)
....+.+.||+|.||.||+|.|+ |..||||++... +.+.+.+|.++.+.. +|+||+.+++.-.... ..-.
T Consensus 211 rqI~L~e~IGkGRyGEVwrG~wr----Ge~VAVKiF~sr---dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~-gs~T 282 (513)
T KOG2052|consen 211 RQIVLQEIIGKGRFGEVWRGRWR----GEDVAVKIFSSR---DERSWFRETEIYQTVMLRHENILGFIAADNKDN-GSWT 282 (513)
T ss_pred heeEEEEEecCccccceeecccc----CCceEEEEeccc---chhhhhhHHHHHHHHHhccchhhhhhhccccCC-CceE
Confidence 45678899999999999999998 678999999743 446788888888765 9999999998633221 2224
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-----CCCCeeecCCCCCCeeecCCCceEE
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHY-----CETPIVHCDLKPSNVLLDGELTAHV 311 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-----~~~~ivH~dlk~~NIll~~~~~~kl 311 (484)
+.|||++|.+.|||.|||..+ .++....++++..+|.||++||.. .+..|.|||||+.|||+..++.+.|
T Consensus 283 QLwLvTdYHe~GSL~DyL~r~-----tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~I 357 (513)
T KOG2052|consen 283 QLWLVTDYHEHGSLYDYLNRN-----TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCI 357 (513)
T ss_pred EEEEeeecccCCcHHHHHhhc-----cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEE
Confidence 789999999999999999843 488999999999999999999953 2577999999999999999999999
Q ss_pred cccCcccccccccccCCCCccccccccccccccCccccCCCC------CCcccceehhhHHHHHHHhC----------CC
Q 011508 312 SDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSE------VSTSGDVYSFGILLLEMFTG----------KG 375 (484)
Q Consensus 312 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~------~~~~~Dvws~Gvvl~elltg----------~~ 375 (484)
+|+|+|...+...+... ......+||.+|||||++.... .-..+||||||.|+||+.-. +.
T Consensus 358 ADLGLAv~h~~~t~~id---i~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~ 434 (513)
T KOG2052|consen 358 ADLGLAVRHDSDTDTID---IPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQL 434 (513)
T ss_pred eeceeeEEecccCCccc---CCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcC
Confidence 99999987766543332 2234567999999999976532 12368999999999999653 35
Q ss_pred CCCCCccCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCC
Q 011508 376 PTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMN 455 (484)
Q Consensus 376 p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt 455 (484)
||.+..+.+-.+.++..-.--+++...++..+ ...++...+.++|+.||..+|.-|-|
T Consensus 435 Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW----------------------~s~~~l~~m~klMkeCW~~Np~aRlt 492 (513)
T KOG2052|consen 435 PYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRW----------------------KSDPALRVMAKLMKECWYANPAARLT 492 (513)
T ss_pred CcccCCCCCCCHHHHhcceeecccCCCCCccc----------------------ccCHHHHHHHHHHHHhhcCCchhhhH
Confidence 66665444444333322221111222222111 13455888999999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 011508 456 MEEVAAQLLSFRN 468 (484)
Q Consensus 456 ~~evl~~L~~i~~ 468 (484)
+--+-+.|.++.+
T Consensus 493 ALriKKtl~~l~~ 505 (513)
T KOG2052|consen 493 ALRIKKTLAKLSN 505 (513)
T ss_pred HHHHHHHHHHHhc
Confidence 9999999988764
No 256
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=1.3e-37 Score=290.56 Aligned_cols=252 Identities=21% Similarity=0.278 Sum_probs=199.3
Q ss_pred CCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC--ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH--RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
+|+..+.||.|+||.||.++. ..++..+++|.+.... ......+.+|++++++++|+||+++++++. ++..
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~--~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~~~ 73 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRR--TEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFM-----DDNT 73 (256)
T ss_pred CceEeeEecccCCceEEEEEE--cCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEe-----cCCe
Confidence 578899999999999999884 4457789999887543 233467889999999999999999999954 3458
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
.+++|||+++++|.+++.... ...+++.++..++.|++.||+||| +.+++|+||+|+||++++++.+||+|||.+
T Consensus 74 ~~~~~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~ 148 (256)
T cd08221 74 LLIEMEYANGGTLYDKIVRQK--GQLFEEEMVLWYLFQIVSAVSYIH---KAGILHRDIKTLNIFLTKAGLIKLGDFGIS 148 (256)
T ss_pred EEEEEEecCCCcHHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChHhEEEeCCCCEEECcCcce
Confidence 899999999999999997543 345899999999999999999999 889999999999999999999999999998
Q ss_pred cccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcch
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPE 397 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 397 (484)
........ ......++..|+|||...+..++.++||||||+++|||++|..||..... .+....
T Consensus 149 ~~~~~~~~-------~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~-----~~~~~~---- 212 (256)
T cd08221 149 KILGSEYS-------MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNP-----LNLVVK---- 212 (256)
T ss_pred EEcccccc-------cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCH-----HHHHHH----
Confidence 76533221 11234588999999999888889999999999999999999999865211 111111
Q ss_pred hhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHH
Q 011508 398 RLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQL 463 (484)
Q Consensus 398 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 463 (484)
+....... ....++..+.+++..||+.+|++||+++|+++.+
T Consensus 213 ----~~~~~~~~--------------------~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 213 ----IVQGNYTP--------------------VVSVYSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred ----HHcCCCCC--------------------CccccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 11000000 0112255688999999999999999999998753
No 257
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-39 Score=305.30 Aligned_cols=245 Identities=27% Similarity=0.359 Sum_probs=195.6
Q ss_pred CCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccc---hHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 161 FSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGA---SKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 161 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
|+-.+.||.|+||.||-|+ +..+...||||.+....... -.++..|+..|.+++|||+|.+.|++... ..
T Consensus 28 f~dLrEIGHGSFGAVYfAr--d~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre-----~T 100 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFAR--DVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLRE-----HT 100 (948)
T ss_pred HHHHHHhcCCccceeEEee--ccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeecc-----ch
Confidence 4556789999999999998 55678899999998654433 35788999999999999999999986543 37
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
.|+||||| -||-.+++.-.. +++.+-++..|..+.++||+||| +.+.||||||+.|||+++.|.|||+|||.|
T Consensus 101 aWLVMEYC-lGSAsDlleVhk---KplqEvEIAAi~~gaL~gLaYLH---S~~~IHRDiKAGNILLse~g~VKLaDFGSA 173 (948)
T KOG0577|consen 101 AWLVMEYC-LGSASDLLEVHK---KPLQEVEIAAITHGALQGLAYLH---SHNRIHRDIKAGNILLSEPGLVKLADFGSA 173 (948)
T ss_pred HHHHHHHH-hccHHHHHHHHh---ccchHHHHHHHHHHHHHHHHHHH---HhhHHhhhccccceEecCCCeeeeccccch
Confidence 79999999 678888876543 46888999999999999999999 999999999999999999999999999999
Q ss_pred cccccccccCCCCccccccccccccccCccccC---CCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhh
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGM---GSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEA 394 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 394 (484)
....+. ..++||+.|||||++. .+.|+-|+||||+|++..||.-.++|...+..- ..+.....
T Consensus 174 si~~PA-----------nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAM-SALYHIAQ-- 239 (948)
T KOG0577|consen 174 SIMAPA-----------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-SALYHIAQ-- 239 (948)
T ss_pred hhcCch-----------hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHH-HHHHHHHh--
Confidence 876433 2467999999999865 478999999999999999999999997543110 00111111
Q ss_pred cchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 395 LPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 395 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
--.|.+. ..+....+..++..||+.-|++|||.++++..
T Consensus 240 -------NesPtLq----------------------s~eWS~~F~~Fvd~CLqKipqeRptse~ll~H 278 (948)
T KOG0577|consen 240 -------NESPTLQ----------------------SNEWSDYFRNFVDSCLQKIPQERPTSEELLKH 278 (948)
T ss_pred -------cCCCCCC----------------------CchhHHHHHHHHHHHHhhCcccCCcHHHHhhc
Confidence 0111111 22336778999999999999999999998753
No 258
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=1.5e-38 Score=297.27 Aligned_cols=243 Identities=25% Similarity=0.371 Sum_probs=185.5
Q ss_pred CccccccceeEEEEEEcCCC-----CeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCceee
Q 011508 165 NLIGAGSFGSVYKGIFDHDD-----HETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFEA 239 (484)
Q Consensus 165 ~~lg~G~~g~Vy~~~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 239 (484)
+.||+|+||.||+|...... ....+++|.+........+.+.+|+.+++.++|||++++++++.. +...+
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~-----~~~~~ 75 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVC-----GDESI 75 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEe-----CCCcE
Confidence 46999999999999864322 234588888865544455678899999999999999999998643 34678
Q ss_pred EEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCc--------eEE
Q 011508 240 LVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELT--------AHV 311 (484)
Q Consensus 240 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~--------~kl 311 (484)
+||||+++|+|.++++... ..+++..++.++.||+.||+||| +++|+||||||+||+++.++. +++
T Consensus 76 lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH---~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l 149 (258)
T cd05078 76 MVQEYVKFGSLDTYLKKNK---NLINISWKLEVAKQLAWALHFLE---DKGLTHGNVCAKNVLLIREEDRKTGNPPFIKL 149 (258)
T ss_pred EEEecCCCCcHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccceEEEecccccccCCCceEEe
Confidence 9999999999999997432 25889999999999999999999 899999999999999987765 689
Q ss_pred cccCcccccccccccCCCCccccccccccccccCccccCC-CCCCcccceehhhHHHHHHHhCC-CCCCCCccCCccHhH
Q 011508 312 SDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-SEVSTSGDVYSFGILLLEMFTGK-GPTNEMFTGNLTLHN 389 (484)
Q Consensus 312 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~-~p~~~~~~~~~~~~~ 389 (484)
+|||.+...... ....++..|+|||++.+ ..++.++|||||||++|||++|. .||...... .
T Consensus 150 ~d~g~~~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~-----~ 213 (258)
T cd05078 150 SDPGISITVLPK-----------EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQ-----K 213 (258)
T ss_pred cccccccccCCc-----------hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHH-----H
Confidence 999987654211 12347788999999876 45799999999999999999985 554331110 0
Q ss_pred HHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHH
Q 011508 390 FVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLL 464 (484)
Q Consensus 390 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 464 (484)
.. ......... +.....++.+++.+||+.||++|||++++++.|+
T Consensus 214 ~~---------~~~~~~~~~---------------------~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 214 KL---------QFYEDRHQL---------------------PAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred HH---------HHHHccccC---------------------CCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 00 000000000 1111456889999999999999999999998873
No 259
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=3.5e-38 Score=297.98 Aligned_cols=247 Identities=25% Similarity=0.353 Sum_probs=195.3
Q ss_pred CCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC-ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCceee
Q 011508 161 FSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH-RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFEA 239 (484)
Q Consensus 161 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 239 (484)
|+..+.||+|+||.||+|... .++..||+|.+.... ....+.+.+|++++++++|+||+++++++. .+...+
T Consensus 6 y~~~~~l~~g~~~~vy~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 78 (277)
T cd06642 6 FTKLERIGKGSFGEVYKGIDN--RTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYL-----KGTKLW 78 (277)
T ss_pred HHHHHHhcCCCCeeEEEEEEc--CCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccc-----cCCceE
Confidence 556688999999999999854 356789999987443 233457889999999999999999999853 455789
Q ss_pred EEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcccc
Q 011508 240 LVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKF 319 (484)
Q Consensus 240 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~ 319 (484)
+||||+++++|.+++.. ..+++..+..++.|++.|+.||| .++++|+||+|+||++++++.++|+|||++..
T Consensus 79 lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH---~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~ 150 (277)
T cd06642 79 IIMEYLGGGSALDLLKP-----GPLEETYIATILREILKGLDYLH---SERKIHRDIKAANVLLSEQGDVKLADFGVAGQ 150 (277)
T ss_pred EEEEccCCCcHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHh---cCCeeccCCChheEEEeCCCCEEEcccccccc
Confidence 99999999999998862 34889999999999999999999 89999999999999999999999999999876
Q ss_pred cccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchhh
Q 011508 320 LPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPERL 399 (484)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 399 (484)
+.... .......++..|+|||++.+..++.++|||||||++|||++|+.||........ ....
T Consensus 151 ~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~--~~~~-------- 213 (277)
T cd06642 151 LTDTQ-------IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRV--LFLI-------- 213 (277)
T ss_pred ccCcc-------hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhH--Hhhh--------
Confidence 53221 111223578899999999988899999999999999999999999865321110 0000
Q ss_pred hhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 400 AEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 400 ~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
..-..+.+ ...++..+.+++.+|++.+|++||++.+|++.
T Consensus 214 ~~~~~~~~-----------------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 214 PKNSPPTL-----------------------EGQYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred hcCCCCCC-----------------------CcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 00000000 11235678899999999999999999999984
No 260
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=7.7e-38 Score=303.18 Aligned_cols=202 Identities=25% Similarity=0.336 Sum_probs=167.8
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
++|++.+.||+|+||.||+++.. .+++.+|+|++.... ......+.+|+.++..++|++|+++++++ .+.
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~ 73 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLK--NADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAF-----QDE 73 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEEC--CCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEE-----ecC
Confidence 46889999999999999999854 356789999986421 22234578899999999999999999885 445
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
...++||||+++|+|.+++.... ..+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||
T Consensus 74 ~~~~lv~ey~~~g~L~~~l~~~~---~~l~~~~~~~~~~qi~~al~~lH---~~~iiHrDlkp~Nili~~~~~~kL~DfG 147 (332)
T cd05623 74 NNLYLVMDYYVGGDLLTLLSKFE---DRLPEDMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFG 147 (332)
T ss_pred CEEEEEEeccCCCcHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEECCCCCEEEeecc
Confidence 58899999999999999997432 35889999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccC-----CCCCCcccceehhhHHHHHHHhCCCCCCC
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGM-----GSEVSTSGDVYSFGILLLEMFTGKGPTNE 379 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dvws~Gvvl~elltg~~p~~~ 379 (484)
++....... ........||+.|+|||++. ...++.++|||||||++|||++|+.||..
T Consensus 148 ~a~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~ 210 (332)
T cd05623 148 SCLKLMEDG------TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYA 210 (332)
T ss_pred hheecccCC------cceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCC
Confidence 987543221 11112346899999999875 34688999999999999999999999965
No 261
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=4.3e-38 Score=304.69 Aligned_cols=202 Identities=26% Similarity=0.347 Sum_probs=168.7
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
++|.+.+.||+|+||.||+++.. .+++.||+|++.... ......+.+|..++..++|+||+++++++ ..+
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~-----~~~ 73 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMK--HTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAF-----QDE 73 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEEC--CCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEE-----EcC
Confidence 47899999999999999999844 457789999986422 22334578899999999999999999885 445
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
+..++||||+++|+|.+++.... ..+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||
T Consensus 74 ~~~~lv~Ey~~gg~L~~~l~~~~---~~l~~~~~~~~~~qi~~~L~~lH---~~~iiHrDlkp~Nill~~~~~~kl~DfG 147 (331)
T cd05624 74 NYLYLVMDYYVGGDLLTLLSKFE---DRLPEDMARFYIAEMVLAIHSIH---QLHYVHRDIKPDNVLLDMNGHIRLADFG 147 (331)
T ss_pred CEEEEEEeCCCCCcHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCchHHEEEcCCCCEEEEecc
Confidence 68899999999999999997432 35889999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCC-----CCCCcccceehhhHHHHHHHhCCCCCCC
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-----SEVSTSGDVYSFGILLLEMFTGKGPTNE 379 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-----~~~~~~~Dvws~Gvvl~elltg~~p~~~ 379 (484)
++....... ........|++.|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 148 ~a~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~ 210 (331)
T cd05624 148 SCLKMNQDG------TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYA 210 (331)
T ss_pred ceeeccCCC------ceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccC
Confidence 987653221 111122468999999998765 4678899999999999999999999964
No 262
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=7.3e-38 Score=291.92 Aligned_cols=247 Identities=29% Similarity=0.478 Sum_probs=194.0
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCcee
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFE 238 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 238 (484)
++|++.+.||+|+||.||++.. .+..||+|.++... ....+.+|+.++++++|||++++++++.. +..
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~----~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~------~~~ 73 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY----TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILH------NGL 73 (254)
T ss_pred HHceeeeeeccCCCCceEeccc----CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcC------CCc
Confidence 4578899999999999999863 35679999886432 34678899999999999999999998532 236
Q ss_pred eEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccc
Q 011508 239 ALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAK 318 (484)
Q Consensus 239 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~ 318 (484)
++||||+++++|.+++.... ...+++..++.++.|++.||+||| +.+++||||||+||+++.++.+||+|||.+.
T Consensus 74 ~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~qi~~al~~lH---~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~ 148 (254)
T cd05083 74 YIVMELMSKGNLVNFLRTRG--RALVSVIQLLQFSLDVAEGMEYLE---SKKLVHRDLAARNILVSEDGVAKVSDFGLAR 148 (254)
T ss_pred EEEEECCCCCCHHHHHHhcC--cCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccCcceEEEcCCCcEEECCCccce
Confidence 89999999999999997532 335889999999999999999999 8999999999999999999999999999987
Q ss_pred ccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhhcch
Q 011508 319 FLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEALPE 397 (484)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 397 (484)
...... .....+..|+|||.+.+..++.++||||||+++|||++ |+.||..... ......
T Consensus 149 ~~~~~~----------~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-----~~~~~~---- 209 (254)
T cd05083 149 VGSMGV----------DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSL-----KEVKEC---- 209 (254)
T ss_pred eccccC----------CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCH-----HHHHHH----
Confidence 542211 11224567999999988889999999999999999998 9999865321 111100
Q ss_pred hhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHH
Q 011508 398 RLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLS 465 (484)
Q Consensus 398 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 465 (484)
+....... .+..++..+.+++.+||+.+|++||+++++++.|++
T Consensus 210 -----~~~~~~~~-------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 210 -----VEKGYRME-------------------PPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred -----HhCCCCCC-------------------CCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 00000000 012235678899999999999999999999998863
No 263
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=1.2e-37 Score=296.74 Aligned_cols=271 Identities=21% Similarity=0.257 Sum_probs=189.1
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCC-eeEEEEEEeeccCccch-----------HHHHHHHHHHHcCCCCCceeEee
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDH-ETLVAVKVLNLQHRGAS-----------KSFIAECQALRSIRHRNLVKIIT 225 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~-~~~vavK~~~~~~~~~~-----------~~~~~e~~~l~~l~h~niv~~~~ 225 (484)
.++|.+.+.||+|+||.||+|...++.. ...+|+|+......... .....+...+..+.|+|++++++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 3679999999999999999998654311 34567776443321110 11223444566779999999998
Q ss_pred eeeeeccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecC
Q 011508 226 SCVSVDFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDG 305 (484)
Q Consensus 226 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~ 305 (484)
++.... ......++++|++ ..++.+.+... ...++..+..++.|++.||+||| +++|+||||||+||+++.
T Consensus 91 ~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH---~~~iiHrDiKp~Nill~~ 161 (294)
T PHA02882 91 CGSFKR-CRMYYRFILLEKL-VENTKEIFKRI----KCKNKKLIKNIMKDMLTTLEYIH---EHGISHGDIKPENIMVDG 161 (294)
T ss_pred eeeEec-CCceEEEEEEehh-ccCHHHHHHhh----ccCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcC
Confidence 754322 1223457888887 44676666532 22567888999999999999999 899999999999999999
Q ss_pred CCceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCc
Q 011508 306 ELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNL 385 (484)
Q Consensus 306 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~ 385 (484)
++.++|+|||+++.+..................||+.|+|||+..+..++.++|||||||++|||++|+.||........
T Consensus 162 ~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~ 241 (294)
T PHA02882 162 NNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGN 241 (294)
T ss_pred CCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchH
Confidence 99999999999987643221111111122234699999999999999999999999999999999999999976532221
Q ss_pred cHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHH
Q 011508 386 TLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQL 463 (484)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 463 (484)
... .....+ +..+....+ ....++..+.+++..|++.+|++||++.++.+.+
T Consensus 242 ~~~-~~~~~~---~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 242 LIH-AAKCDF---IKRLHEGKI----------------------KIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred HHH-HhHHHH---HHHhhhhhh----------------------ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 111 111000 111111100 0122356789999999999999999999998876
No 264
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=3.2e-38 Score=305.75 Aligned_cols=241 Identities=25% Similarity=0.253 Sum_probs=181.1
Q ss_pred cccccceeEEEEEEcCCCCeeEEEEEEeeccCc---cchHHHHHHHHHHHcC---CCCCceeEeeeeeeeccCCCceeeE
Q 011508 167 IGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR---GASKSFIAECQALRSI---RHRNLVKIITSCVSVDFQGNDFEAL 240 (484)
Q Consensus 167 lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~~~~~~~~~~~l 240 (484)
||+|+||+||+|+. ..++..||+|++..... .....+..|..++... +||||+++++.+ ..+...++
T Consensus 1 lG~G~~g~Vy~~~~--~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~-----~~~~~~~l 73 (330)
T cd05586 1 IGKGTFGQVYQVRK--KDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSF-----QTDSDLYL 73 (330)
T ss_pred CCCCCceEEEEEEE--CCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEE-----ecCCeEEE
Confidence 79999999999984 44578899999864321 1223455666777655 699999999884 44558899
Q ss_pred EeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccccc
Q 011508 241 VYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFL 320 (484)
Q Consensus 241 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~ 320 (484)
||||+++|+|.+++... ..+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||++...
T Consensus 74 v~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~qil~al~~LH---~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~ 146 (330)
T cd05586 74 VTDYMSGGELFWHLQKE----GRFSEDRAKFYIAELVLALEHLH---KYDIVYRDLKPENILLDATGHIALCDFGLSKAN 146 (330)
T ss_pred EEcCCCCChHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEecCCcCcCC
Confidence 99999999999988742 35889999999999999999999 899999999999999999999999999998753
Q ss_pred ccccccCCCCccccccccccccccCccccCCC-CCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchhh
Q 011508 321 PEAANNLSSNQSSSVGVKGTVGYAAPEYGMGS-EVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPERL 399 (484)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 399 (484)
.... .......||..|+|||++.+. .++.++|||||||++|||++|+.||..... .+........
T Consensus 147 ~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~-----~~~~~~i~~~-- 212 (330)
T cd05586 147 LTDN-------KTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDT-----QQMYRNIAFG-- 212 (330)
T ss_pred CCCC-------CCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCH-----HHHHHHHHcC--
Confidence 2211 112234689999999988654 479999999999999999999999965311 1111110000
Q ss_pred hhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCC----HHHHHH
Q 011508 400 AEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMN----MEEVAA 461 (484)
Q Consensus 400 ~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt----~~evl~ 461 (484)
+..+. .......+.+++.+||+.||++||+ +.|+++
T Consensus 213 ----~~~~~----------------------~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 213 ----KVRFP----------------------KNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred ----CCCCC----------------------CccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 00000 0011456788999999999999984 556554
No 265
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=4.2e-38 Score=299.44 Aligned_cols=249 Identities=23% Similarity=0.329 Sum_probs=194.1
Q ss_pred CCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCceeeE
Q 011508 161 FSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFEAL 240 (484)
Q Consensus 161 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 240 (484)
|.....||+|+||.||++.. ..++..||||.+........+.+.+|+.+++.++|+|++++++.+. .++..++
T Consensus 24 ~~~~~~lg~g~~g~v~~~~~--~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~-----~~~~~~l 96 (292)
T cd06658 24 LDSFIKIGEGSTGIVCIATE--KHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYL-----VGDELWV 96 (292)
T ss_pred HhhhhcccCCCCeEEEEEEE--CCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHhee-----cCCeEEE
Confidence 34456799999999999984 3456789999987655555567889999999999999999999854 3458899
Q ss_pred EeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccccc
Q 011508 241 VYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFL 320 (484)
Q Consensus 241 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~ 320 (484)
||||+++++|.+++.. ..+++..++.++.||+.||+||| +++|+||||||+||++++++.++|+|||++...
T Consensus 97 v~e~~~~~~L~~~~~~-----~~l~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~ 168 (292)
T cd06658 97 VMEFLEGGALTDIVTH-----TRMNEEQIATVCLSVLRALSYLH---NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQV 168 (292)
T ss_pred EEeCCCCCcHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCEEEccCcchhhc
Confidence 9999999999998852 24789999999999999999999 899999999999999999999999999998754
Q ss_pred ccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchhhh
Q 011508 321 PEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPERLA 400 (484)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 400 (484)
.... .......++..|+|||...+..++.++||||||+++|||++|+.||...... . ... .+.
T Consensus 169 ~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~----~-~~~-----~~~ 231 (292)
T cd06658 169 SKEV-------PKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPL----Q-AMR-----RIR 231 (292)
T ss_pred cccc-------ccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----H-HHH-----HHH
Confidence 3221 1112245889999999998888999999999999999999999998642110 0 000 011
Q ss_pred hhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 401 EIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 401 ~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
....+.+.. .......+.+++..|+..||++|||++|+++.
T Consensus 232 ~~~~~~~~~---------------------~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 232 DNLPPRVKD---------------------SHKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred hcCCCcccc---------------------ccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 111111100 01114467889999999999999999999874
No 266
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=7.6e-38 Score=293.71 Aligned_cols=255 Identities=27% Similarity=0.354 Sum_probs=199.2
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
++|+..+.||+|++|.||++... .++..+|+|.+..... .....+.+|++++++++||||+++++.+.. +..
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~--~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~ 73 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHR--PTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYN-----NGD 73 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEc--CCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeec-----CCE
Confidence 35778899999999999999853 4578899999876543 334678899999999999999999998643 358
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC-CCeeecCCCCCCeeecCCCceEEcccCc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCE-TPIVHCDLKPSNVLLDGELTAHVSDFGL 316 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 316 (484)
.++++||+++++|.+++.... ..+++..+..++.|++.|++||| + .+++|+||||+||++++++.++|+|||.
T Consensus 74 ~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lH---~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~ 147 (265)
T cd06605 74 ISICMEYMDGGSLDKILKEVQ---GRIPERILGKIAVAVLKGLTYLH---EKHKIIHRDVKPSNILVNSRGQIKLCDFGV 147 (265)
T ss_pred EEEEEEecCCCcHHHHHHHcc---CCCCHHHHHHHHHHHHHHHHHHc---CCCCeecCCCCHHHEEECCCCCEEEeeccc
Confidence 899999999999999997542 45889999999999999999999 7 9999999999999999999999999999
Q ss_pred ccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcc
Q 011508 317 AKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALP 396 (484)
Q Consensus 317 a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 396 (484)
+........ ....++..|+|||.+.+..++.++||||||+++|+|++|+.||...................
T Consensus 148 ~~~~~~~~~---------~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~ 218 (265)
T cd06605 148 SGQLVNSLA---------KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVN 218 (265)
T ss_pred chhhHHHHh---------hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhc
Confidence 876532110 11457889999999988899999999999999999999999997543211111111111100
Q ss_pred hhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 397 ERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 397 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
. ..+.+ ....+..++.+++..||..||++|||+.|++..
T Consensus 219 ~-----~~~~~----------------------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 219 E-----PPPRL----------------------PSGKFSPDFQDFVNLCLIKDPRERPSYKELLEH 257 (265)
T ss_pred C-----CCCCC----------------------ChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence 0 00000 011135678999999999999999999999753
No 267
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=1.5e-37 Score=290.63 Aligned_cols=241 Identities=26% Similarity=0.417 Sum_probs=187.3
Q ss_pred CccccccceeEEEEEEcCCCC--------eeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCc
Q 011508 165 NLIGAGSFGSVYKGIFDHDDH--------ETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 165 ~~lg~G~~g~Vy~~~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
+.||+|+||.||+|....... ...+++|.+...... ...+.+|+.+++.++|+||+++++++.. .
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~------~ 73 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR------D 73 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec------C
Confidence 469999999999999764321 145788877654433 5788999999999999999999998743 3
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCC-------ce
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGEL-------TA 309 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~-------~~ 309 (484)
..++||||+++|+|.+++.... ..+++..++.++.|++.||+||| +++|+||||||+||+++.++ .+
T Consensus 74 ~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dlkp~Nill~~~~~~~~~~~~~ 147 (259)
T cd05037 74 ENIMVEEYVKFGPLDVFLHREK---NNVSLHWKLDVAKQLASALHYLE---DKKLVHGNVCGKNILVARYGLNEGYVPFI 147 (259)
T ss_pred CcEEEEEcCCCCcHHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHh---hCCeecccCccceEEEecCccccCCceeE
Confidence 5689999999999999997543 25889999999999999999999 89999999999999999887 79
Q ss_pred EEcccCcccccccccccCCCCccccccccccccccCccccCCC--CCCcccceehhhHHHHHHHh-CCCCCCCCccCCcc
Q 011508 310 HVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGS--EVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLT 386 (484)
Q Consensus 310 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~--~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~ 386 (484)
||+|||++...... ....++..|+|||++.+. .++.++||||||+++|||++ |..||...... .
T Consensus 148 kl~Dfg~a~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~--~ 214 (259)
T cd05037 148 KLSDPGIPITVLSR-----------EERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSS--E 214 (259)
T ss_pred EeCCCCcccccccc-----------cccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCch--h
Confidence 99999998865321 113466789999998876 78999999999999999999 57777553211 0
Q ss_pred HhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHH
Q 011508 387 LHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLL 464 (484)
Q Consensus 387 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 464 (484)
...+.. ...... ......+.+++.+||+.+|++|||+.||++.|+
T Consensus 215 ~~~~~~-----------~~~~~~----------------------~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 215 KERFYQ-----------DQHRLP----------------------MPDCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred HHHHHh-----------cCCCCC----------------------CCCchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 000000 000000 000256889999999999999999999998873
No 268
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-38 Score=295.08 Aligned_cols=249 Identities=23% Similarity=0.352 Sum_probs=204.5
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCcc--chHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCc
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRG--ASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
+=|.+.+.||+|.|+.|-+|+ +--+|..||||++.+..-. ....+.+|++-|+-++|||||++|.+ .....
T Consensus 18 GLYDLekTlG~GHFAVVKLAr--HVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEV-----iDTQT 90 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLAR--HVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEV-----IDTQT 90 (864)
T ss_pred eeehhhhhhcCCceehhhhhh--hhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeeh-----hcccc
Confidence 457888999999999999998 5567899999999865433 23578899999999999999999998 45556
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeee-cCCCceEEcccC
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLL-DGELTAHVSDFG 315 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll-~~~~~~kl~Dfg 315 (484)
..|+|+|.-.+|+|.+|+.... ..+.+.-..+++.||+.|+.|+| ...+|||||||+|+.+ ..-|-+||.|||
T Consensus 91 KlyLiLELGD~GDl~DyImKHe---~Gl~E~La~kYF~QI~~AI~YCH---qLHVVHRDLKPENVVFFEKlGlVKLTDFG 164 (864)
T KOG4717|consen 91 KLYLILELGDGGDLFDYIMKHE---EGLNEDLAKKYFAQIVHAISYCH---QLHVVHRDLKPENVVFFEKLGLVKLTDFG 164 (864)
T ss_pred eEEEEEEecCCchHHHHHHhhh---ccccHHHHHHHHHHHHHHHHHHh---hhhhhcccCCcceeEEeeecCceEeeecc
Confidence 8999999999999999998544 45889999999999999999999 7889999999999877 556899999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCCCCCC-cccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhh
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVS-TSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEA 394 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~-~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 394 (484)
++..+.+. ......+|+..|.|||++.+..|+ ++.||||+|||||-|++|+.||+...+.+
T Consensus 165 FSNkf~PG--------~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSE---------- 226 (864)
T KOG4717|consen 165 FSNKFQPG--------KKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSE---------- 226 (864)
T ss_pred ccccCCCc--------chhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchh----------
Confidence 99766432 233456899999999999998875 68999999999999999999998753322
Q ss_pred cchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 395 LPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 395 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
.+.-++|-.... +.....+..+||..||..||++|.+.+||+..
T Consensus 227 ---TLTmImDCKYtv---------------------PshvS~eCrdLI~sMLvRdPkkRAslEeI~s~ 270 (864)
T KOG4717|consen 227 ---TLTMIMDCKYTV---------------------PSHVSKECRDLIQSMLVRDPKKRASLEEIVST 270 (864)
T ss_pred ---hhhhhhcccccC---------------------chhhhHHHHHHHHHHHhcCchhhccHHHHhcc
Confidence 233344433322 33446677899999999999999999998753
No 269
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=2e-37 Score=289.28 Aligned_cols=251 Identities=21% Similarity=0.268 Sum_probs=197.9
Q ss_pred CCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC--ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH--RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
+|++.+.||+|+||.+|++... .+++.||+|.+.... ....+++.+|+.++++++|+||+++++++ .....
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~--~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~ 73 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSK--EDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESF-----EENGN 73 (256)
T ss_pred CceEEEEeccCCceEEEEEEEc--CCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeee-----cCCCe
Confidence 4788999999999999999844 457789999987532 22345788999999999999999999984 44568
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
.++|+||+++++|.+++.... ...+++.+++.++.|++.|++||| +.+++|+||+|+||+++.++.++|+|||.+
T Consensus 74 ~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~~l~~~nil~~~~~~~~l~d~~~~ 148 (256)
T cd08218 74 LYIVMDYCEGGDLYKKINAQR--GVLFPEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTIKLGDFGIA 148 (256)
T ss_pred EEEEEecCCCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEEeeccce
Confidence 899999999999999987432 234789999999999999999999 899999999999999999999999999998
Q ss_pred cccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcch
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPE 397 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 397 (484)
....... .......++..|+|||+..+..++.++|+|||||++++|++|+.||.... ....+...
T Consensus 149 ~~~~~~~-------~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~-----~~~~~~~~--- 213 (256)
T cd08218 149 RVLNSTV-------ELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGN-----MKNLVLKI--- 213 (256)
T ss_pred eecCcch-------hhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCC-----HHHHHHHH---
Confidence 7653321 11122347888999999988889999999999999999999999986421 11111111
Q ss_pred hhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 398 RLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 398 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
....... .+..+..++.+++.+||+.+|++||++.||++.
T Consensus 214 -----~~~~~~~--------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 214 -----IRGSYPP--------------------VSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred -----hcCCCCC--------------------CcccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 1000000 012235678999999999999999999999863
No 270
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=2.1e-37 Score=289.15 Aligned_cols=249 Identities=22% Similarity=0.346 Sum_probs=195.9
Q ss_pred CCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC--ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH--RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
+|+..+.||+|++|.||++... .++..+|+|.+.... ......+.+|++++++++|||++++++.+ ..+..
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~--~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~ 73 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRK--ADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENF-----LEDKA 73 (256)
T ss_pred CceEEEEecccCceEEEEEEEc--CCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeE-----ecCCE
Confidence 4788899999999999999854 357889999987543 22346788999999999999999999874 34558
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCC-CceEEcccCc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGE-LTAHVSDFGL 316 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~-~~~kl~Dfg~ 316 (484)
.++||||+++++|.+++.... ...+++..++.++.|++.+++||| +++++|+||+|+||+++++ +.+||+|||.
T Consensus 74 ~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh---~~~i~h~dl~~~nil~~~~~~~~~l~d~~~ 148 (256)
T cd08220 74 LMIVMEYAPGGTLAEYIQKRC--NSLLDEDTILHFFVQILLALHHVH---TKLILHRDLKTQNILLDKHKMVVKIGDFGI 148 (256)
T ss_pred EEEEEecCCCCCHHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEccCCC
Confidence 899999999999999997533 335889999999999999999999 8999999999999999865 4689999999
Q ss_pred ccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcc
Q 011508 317 AKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALP 396 (484)
Q Consensus 317 a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 396 (484)
+....... ......++..|+|||.+.+..++.++||||||+++|+|++|+.||...... ........
T Consensus 149 ~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~-----~~~~~~~~ 215 (256)
T cd08220 149 SKILSSKS--------KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLP-----ALVLKIMS 215 (256)
T ss_pred ceecCCCc--------cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchH-----HHHHHHHh
Confidence 98663321 112245788999999998888999999999999999999999998653211 11111000
Q ss_pred hhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 397 ERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 397 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
.....+ +..+...+.+++..||+.+|++|||+.|+++
T Consensus 216 ~~~~~~----------------------------~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 216 GTFAPI----------------------------SDRYSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred cCCCCC----------------------------CCCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 000000 1122567889999999999999999999986
No 271
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=5.1e-38 Score=298.03 Aligned_cols=271 Identities=20% Similarity=0.244 Sum_probs=193.3
Q ss_pred CCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
+|++.+.||+|+||.||+|+.. .++..+|+|.++.... .....+.+|++++++++|+|++++++++ .+...
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~--~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~-----~~~~~ 73 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNR--ETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVL-----HSDKK 73 (284)
T ss_pred CceeEEEecccCCeEEEEEEEC--CCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHh-----ccCCc
Confidence 4788899999999999999954 4567899999875432 2235678899999999999999999984 44558
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
.++|+||++ ++|.+++... ...+++..++.++.||++||.||| .++|+||||||+||+++.++.+||+|||.+
T Consensus 74 ~~lv~e~~~-~~l~~~~~~~---~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dl~~~nil~~~~~~~~l~dfg~~ 146 (284)
T cd07839 74 LTLVFEYCD-QDLKKYFDSC---NGDIDPEIVKSFMFQLLKGLAFCH---SHNVLHRDLKPQNLLINKNGELKLADFGLA 146 (284)
T ss_pred eEEEEecCC-CCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEcCCCcEEECccchh
Confidence 899999995 6888887643 235899999999999999999999 899999999999999999999999999998
Q ss_pred cccccccccCCCCccccccccccccccCccccCCC-CCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcc
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGS-EVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALP 396 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 396 (484)
+...... .......++..|+|||.+.+. .++.++|||||||++|||+||..|+.........+.........
T Consensus 147 ~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~ 219 (284)
T cd07839 147 RAFGIPV-------RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGT 219 (284)
T ss_pred hccCCCC-------CCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCC
Confidence 7653221 111223468899999987664 47899999999999999999998864432211111111110000
Q ss_pred hh------hhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 397 ER------LAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 397 ~~------~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
.. +....+......... .. .. ......+..++.+++.+||+.||.+|||++|+++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~-----~~---~~--~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 220 PTEESWPGVSKLPDYKPYPMYPA-----TT---SL--VNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred CChHHhHHhhhcccccccCCCCC-----cc---hh--hhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 00 001111000000000 00 00 0001123567889999999999999999999975
No 272
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.9e-37 Score=294.40 Aligned_cols=255 Identities=24% Similarity=0.310 Sum_probs=195.6
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
++|++.+.||+|+||.||+|... .++..||+|.++.... .....+.+|++++++++|+||+++++.+. .+..
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~--~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----~~~~ 73 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHR--PTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFF-----IEGA 73 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEc--CCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhhee-----cCCe
Confidence 36888999999999999999854 4578899998875422 23467889999999999999999999854 3458
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
.++||||+++++|.+++.... ....+++..+..++.|++.||.|||+ +.+|+|+||||+||+++.++.+||+|||.+
T Consensus 74 ~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~dfg~~ 150 (286)
T cd06622 74 VYMCMEYMDAGSLDKLYAGGV-ATEGIPEDVLRRITYAVVKGLKFLKE--EHNIIHRDVKPTNVLVNGNGQVKLCDFGVS 150 (286)
T ss_pred EEEEEeecCCCCHHHHHHhcc-ccCCCCHHHHHHHHHHHHHHHHHHHh--cCCEeeCCCCHHHEEECCCCCEEEeecCCc
Confidence 899999999999999987432 13368999999999999999999993 359999999999999999999999999998
Q ss_pred cccccccccCCCCccccccccccccccCccccCCC------CCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHH
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGS------EVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFV 391 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~------~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 391 (484)
..+.... .....++..|+|||.+.+. .++.++|||||||++|+|++|+.||....... ....
T Consensus 151 ~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~--~~~~- 218 (286)
T cd06622 151 GNLVASL---------AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYAN--IFAQ- 218 (286)
T ss_pred ccccCCc---------cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhh--HHHH-
Confidence 7552211 1123478899999987554 35889999999999999999999996531110 0000
Q ss_pred HhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 392 KEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 392 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
+..+.+..... .+..+..++.+++.+|++.+|++||+++++++.
T Consensus 219 -------~~~~~~~~~~~--------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 219 -------LSAIVDGDPPT--------------------LPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred -------HHHHhhcCCCC--------------------CCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 11111100000 012235678899999999999999999999874
No 273
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=2.5e-37 Score=287.76 Aligned_cols=248 Identities=28% Similarity=0.425 Sum_probs=192.8
Q ss_pred CccccccceeEEEEEEcCCCCeeEEEEEEeeccCcc-chHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCceeeEEee
Q 011508 165 NLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRG-ASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFEALVYE 243 (484)
Q Consensus 165 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 243 (484)
++||+|+||.||+|... . ++.||+|.+...... ..+.+.+|++++++++|+||+++++++. .....++|||
T Consensus 1 ~~lg~g~~g~v~~~~~~--~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~~v~e 72 (251)
T cd05041 1 EKIGKGNFGDVYKGVLK--G-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCV-----QKQPIYIVME 72 (251)
T ss_pred CccccCCCceEEEEEEe--C-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEe-----cCCCeEEEEE
Confidence 46999999999999854 2 678999988765443 4467899999999999999999999854 3447899999
Q ss_pred cccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcccccccc
Q 011508 244 LMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFLPEA 323 (484)
Q Consensus 244 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~~~~ 323 (484)
|+++++|.+++.... ..+++..++.++.+++.+|+||| +++++||||+|+||+++.++.+||+|||.+......
T Consensus 73 ~~~~~~l~~~l~~~~---~~~~~~~~~~~~~~~~~~l~~lH---~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~ 146 (251)
T cd05041 73 LVPGGSLLTFLRKKK---NRLTVKKLLQMSLDAAAGMEYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGG 146 (251)
T ss_pred cCCCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---hCCEehhhcCcceEEEcCCCcEEEeeccccccccCC
Confidence 999999999996432 35789999999999999999999 899999999999999999999999999998765321
Q ss_pred cccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhhcchhhhhh
Q 011508 324 ANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEALPERLAEI 402 (484)
Q Consensus 324 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (484)
... ........+..|+|||.+.+..++.++|||||||++|||+| |..||...... .....+
T Consensus 147 ~~~-----~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~--~~~~~~----------- 208 (251)
T cd05041 147 IYT-----VSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQ--QTRERI----------- 208 (251)
T ss_pred cce-----eccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHH--HHHHHH-----------
Confidence 100 00011224567999999988889999999999999999999 88888653211 111110
Q ss_pred cCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHH
Q 011508 403 VDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLL 464 (484)
Q Consensus 403 ~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 464 (484)
...... ..+..++.++.+++.+|++.+|++|||+.||++.|+
T Consensus 209 -~~~~~~-------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 209 -ESGYRM-------------------PAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred -hcCCCC-------------------CCCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 000000 001223567899999999999999999999999885
No 274
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=1.5e-37 Score=295.92 Aligned_cols=204 Identities=26% Similarity=0.422 Sum_probs=166.3
Q ss_pred HhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCC
Q 011508 156 KATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQG 234 (484)
Q Consensus 156 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 234 (484)
.++.+|.+.+.||+|+||.||+|... .++..||+|++..... .....+.+|+.+++.++|+||+++++++. .
T Consensus 2 ~~~~~y~~~~~ig~g~~~~v~~~~~~--~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~-----~ 74 (291)
T cd07870 2 GAATSYLNLEKLGEGSYATVYKGISR--INGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIH-----T 74 (291)
T ss_pred CccceeEEEEEEEecCCEEEEEEEEc--CCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEe-----c
Confidence 35678999999999999999999843 3567899999875433 22346788999999999999999999853 4
Q ss_pred CceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEccc
Q 011508 235 NDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDF 314 (484)
Q Consensus 235 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 314 (484)
+...++|+||+. +++.+++... ...+++..+..++.|++.||+||| +.+|+|+||||+||+++.++.+||+||
T Consensus 75 ~~~~~lv~e~~~-~~l~~~~~~~---~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Df 147 (291)
T cd07870 75 KETLTFVFEYMH-TDLAQYMIQH---PGGLHPYNVRLFMFQLLRGLAYIH---GQHILHRDLKPQNLLISYLGELKLADF 147 (291)
T ss_pred CCeEEEEEeccc-CCHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHHEEEcCCCcEEEecc
Confidence 457899999994 7888777532 234778889999999999999999 889999999999999999999999999
Q ss_pred CcccccccccccCCCCccccccccccccccCccccCC-CCCCcccceehhhHHHHHHHhCCCCCCCC
Q 011508 315 GLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-SEVSTSGDVYSFGILLLEMFTGKGPTNEM 380 (484)
Q Consensus 315 g~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~ 380 (484)
|+++...... .......++..|+|||.+.+ ..++.++|||||||++|||++|+.||...
T Consensus 148 g~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~ 207 (291)
T cd07870 148 GLARAKSIPS-------QTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGV 207 (291)
T ss_pred ccccccCCCC-------CCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCc
Confidence 9987542211 11122346889999998865 35788999999999999999999999754
No 275
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=1.5e-37 Score=295.90 Aligned_cols=251 Identities=24% Similarity=0.309 Sum_probs=197.8
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCcee
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFE 238 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 238 (484)
++|.+.+.||+|+||.||+|... .++..||+|.+........+.+.+|+.+++.++|||++++++++.. ....
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~-----~~~~ 91 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDV--ATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLV-----GDEL 91 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEc--CCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeee-----CCcE
Confidence 67889999999999999999843 3467899999876555555778999999999999999999998643 4478
Q ss_pred eEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccc
Q 011508 239 ALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAK 318 (484)
Q Consensus 239 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~ 318 (484)
++|+||+++++|.+++... .+++..+..++.|++.||+||| +++++|+||+|+||+++.++.++|+|||.+.
T Consensus 92 ~lv~e~~~~~~L~~~~~~~-----~l~~~~~~~i~~~l~~al~~LH---~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~ 163 (293)
T cd06647 92 WVVMEYLAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCA 163 (293)
T ss_pred EEEEecCCCCcHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHH---hCCEeeccCCHHHEEEcCCCCEEEccCccee
Confidence 9999999999999998632 3788999999999999999999 8999999999999999999999999999887
Q ss_pred ccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchh
Q 011508 319 FLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPER 398 (484)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 398 (484)
...... .......++..|+|||.+....++.++||||||+++|++++|+.||......... ..... ..
T Consensus 164 ~~~~~~-------~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~-~~~~~----~~ 231 (293)
T cd06647 164 QITPEQ-------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL-YLIAT----NG 231 (293)
T ss_pred cccccc-------cccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhhe-eehhc----CC
Confidence 553221 1112235888999999988888999999999999999999999999653211100 00000 00
Q ss_pred hhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 399 LAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 399 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
.+... .+......+.+++..||+.+|++||++.+++..
T Consensus 232 -----~~~~~---------------------~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 232 -----TPELQ---------------------NPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred -----CCCCC---------------------CccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000 011124568899999999999999999999865
No 276
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=4e-37 Score=287.47 Aligned_cols=254 Identities=31% Similarity=0.497 Sum_probs=197.3
Q ss_pred CCccCccccccceeEEEEEEcCCC--CeeEEEEEEeeccCcc-chHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 161 FSLENLIGAGSFGSVYKGIFDHDD--HETLVAVKVLNLQHRG-ASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 161 ~~~~~~lg~G~~g~Vy~~~~~~~~--~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
+++.+.||.|+||.||+++..... ....||+|.+...... ..+.+.+|+..+..++|+|++++++++.. .+.
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~ 75 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTE-----EEP 75 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcC-----CCe
Confidence 456789999999999999975432 2478999999755433 45688999999999999999999998543 357
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
.+++|||+++++|.+++..... ..+++.+++.++.|++.||+||| +.+++|+||||+||++++++.++|+|||.+
T Consensus 76 ~~~i~e~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~ql~~~l~~lh---~~~~~h~dl~~~nil~~~~~~~~l~dfg~~ 150 (258)
T smart00219 76 LMIVMEYMEGGDLLDYLRKNRP--KELSLSDLLSFALQIARGMEYLE---SKNFIHRDLAARNCLVGENLVVKISDFGLS 150 (258)
T ss_pred eEEEEeccCCCCHHHHHHhhhh--ccCCHHHHHHHHHHHHHHHHHHh---cCCeeecccccceEEEccCCeEEEcccCCc
Confidence 8999999999999999974331 12899999999999999999999 899999999999999999999999999999
Q ss_pred cccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhhcc
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEALP 396 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 396 (484)
.......... .....++..|+|||...+..++.++||||+|+++++|++ |+.||.... .........
T Consensus 151 ~~~~~~~~~~------~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~-----~~~~~~~~~- 218 (258)
T smart00219 151 RDLYDDDYYK------KKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMS-----NEEVLEYLK- 218 (258)
T ss_pred eecccccccc------cccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHh-
Confidence 8764331110 001236789999999988889999999999999999998 788876521 111111100
Q ss_pred hhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHH
Q 011508 397 ERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQL 463 (484)
Q Consensus 397 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 463 (484)
...... .+..++.++.+++.+|+..+|++|||+.|+++.|
T Consensus 219 -------~~~~~~--------------------~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 219 -------KGYRLP--------------------KPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred -------cCCCCC--------------------CCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 000000 0111356789999999999999999999998764
No 277
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=2.2e-37 Score=298.35 Aligned_cols=211 Identities=24% Similarity=0.369 Sum_probs=170.7
Q ss_pred CCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCc
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
+|++.+.||+|++|.||+|+......+..||+|.+.... ....+.+.+|+.+++.++||||+++++++... ...
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---~~~ 77 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEH---ADK 77 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCC---CCc
Confidence 478889999999999999996543367899999998633 34456788999999999999999999997532 235
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecC----CCceEE
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAP-RNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDG----ELTAHV 311 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~-~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~----~~~~kl 311 (484)
..++||||++ ++|.+++....... ..+++..++.++.|++.||+||| +.+|+||||||+||+++. ++.+||
T Consensus 78 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~h~dlkp~Nil~~~~~~~~~~~kl 153 (316)
T cd07842 78 SVYLLFDYAE-HDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLH---SNWVLHRDLKPANILVMGEGPERGVVKI 153 (316)
T ss_pred eEEEEEeCCC-cCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCCHHHEEEcCCCCccceEEE
Confidence 7899999995 57877775443332 36899999999999999999999 899999999999999999 899999
Q ss_pred cccCcccccccccccCCCCccccccccccccccCccccCC-CCCCcccceehhhHHHHHHHhCCCCCCCCc
Q 011508 312 SDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-SEVSTSGDVYSFGILLLEMFTGKGPTNEMF 381 (484)
Q Consensus 312 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~ 381 (484)
+|||++......... ........++..|+|||.+.+ ..++.++|||||||++|+|++|+.||....
T Consensus 154 ~Dfg~~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~ 220 (316)
T cd07842 154 GDLGLARLFNAPLKP----LADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGRE 220 (316)
T ss_pred CCCccccccCCCccc----ccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCc
Confidence 999999876432211 111223457889999998765 457899999999999999999999997643
No 278
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=1.5e-37 Score=297.78 Aligned_cols=261 Identities=22% Similarity=0.251 Sum_probs=195.8
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc---cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR---GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
++|++.+.||+|+||.||++.. ...++.|++|.+..... .....+.+|+++++.++||||+++++.+ ..+
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~--~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~ 73 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRH--KETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSF-----ETK 73 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEE--CCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEE-----ecC
Confidence 3688899999999999999984 44578899999875432 2335678999999999999999999885 345
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
+..++||||+++++|.+++... ..+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+|||
T Consensus 74 ~~~~lv~e~~~g~~L~~~l~~~----~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~NIll~~~~~~~l~dfg 146 (305)
T cd05609 74 RHLCMVMEYVEGGDCATLLKNI----GALPVDMARMYFAETVLALEYLH---NYGIVHRDLKPDNLLITSMGHIKLTDFG 146 (305)
T ss_pred CEEEEEEecCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHEEECCCCCEEEeeCC
Confidence 5889999999999999999643 35889999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccC--------CCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccH
Q 011508 316 LAKFLPEAANNL--------SSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTL 387 (484)
Q Consensus 316 ~a~~~~~~~~~~--------~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~ 387 (484)
.++......... ...........++..|+|||.+....++.++|||||||++|||++|+.||.+...
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~----- 221 (305)
T cd05609 147 LSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP----- 221 (305)
T ss_pred CccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----
Confidence 886421110000 0000011124578899999999888899999999999999999999999864211
Q ss_pred hHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHH
Q 011508 388 HNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLL 464 (484)
Q Consensus 388 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 464 (484)
.++........ ...+.. ...++..+.+++.+||+.||++||++.++.+.|+
T Consensus 222 ~~~~~~~~~~~---~~~~~~-----------------------~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~ 272 (305)
T cd05609 222 EELFGQVISDD---IEWPEG-----------------------DEALPADAQDLISRLLRQNPLERLGTGGAFEVKQ 272 (305)
T ss_pred HHHHHHHHhcc---cCCCCc-----------------------cccCCHHHHHHHHHHhccChhhccCccCHHHHHh
Confidence 11111100000 000000 0112567899999999999999999655555554
No 279
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=3.5e-37 Score=289.65 Aligned_cols=256 Identities=22% Similarity=0.309 Sum_probs=196.2
Q ss_pred CCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc------cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccC
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR------GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQ 233 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 233 (484)
+|+..+.||+|++|.||+|.. ..++..||+|++..... ...+.+.+|++++++++|+|++++++++ .
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~--~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-----~ 73 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARD--VKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGAT-----C 73 (268)
T ss_pred CccccceecCcCceEEEEEEE--cCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhcee-----c
Confidence 477889999999999999984 44678899999875431 1235788999999999999999999985 3
Q ss_pred CCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCC-ceEEc
Q 011508 234 GNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGEL-TAHVS 312 (484)
Q Consensus 234 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~-~~kl~ 312 (484)
+++..++|+||+++++|.+++... ..+++..++.++.|++.||+||| +++++|+||+|+||+++.++ .+||+
T Consensus 74 ~~~~~~~v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~ql~~al~~LH---~~~i~H~~i~~~nil~~~~~~~~~l~ 146 (268)
T cd06630 74 EDSHFNLFVEWMAGGSVSHLLSKY----GAFKEAVIINYTEQLLRGLSYLH---ENQIIHRDVKGANLLIDSTGQRLRIA 146 (268)
T ss_pred cCCeEEEEEeccCCCcHHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEc
Confidence 445889999999999999999743 35889999999999999999999 89999999999999998775 69999
Q ss_pred ccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHH
Q 011508 313 DFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVK 392 (484)
Q Consensus 313 Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 392 (484)
|||.+......... .........++..|+|||.+.+..++.++||||+|+++|+|++|+.||...... .......
T Consensus 147 dfg~~~~~~~~~~~---~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~ 221 (268)
T cd06630 147 DFGAAARLAAKGTG---AGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHS--NHLALIF 221 (268)
T ss_pred cccccccccccccc---CCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCc--chHHHHH
Confidence 99998776433111 111112345788999999998888999999999999999999999998642211 1011110
Q ss_pred hhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 393 EALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 393 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
......... ..+.....++.+++..|++.+|++|||+.|+++
T Consensus 222 --------~~~~~~~~~-------------------~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 222 --------KIASATTAP-------------------SIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred --------HHhccCCCC-------------------CCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 000000000 001223567889999999999999999999975
No 280
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=4.4e-37 Score=288.53 Aligned_cols=254 Identities=23% Similarity=0.267 Sum_probs=192.5
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc-----cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR-----GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQ 233 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 233 (484)
.+|++.+.||+|+||.||+|... .++..||+|.+..... ...+.+.+|+.++++++||||+++++++.. .
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~--~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~ 76 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDA--DTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRD---P 76 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEc--CCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEecc---C
Confidence 57889999999999999999843 4578899998864321 123567889999999999999999997532 1
Q ss_pred CCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcc
Q 011508 234 GNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSD 313 (484)
Q Consensus 234 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~D 313 (484)
.....++||||+++++|.+++... ..+++..++.++.|++.||+||| +.+++|+||||+||+++.++.++|+|
T Consensus 77 ~~~~~~~v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~l~D 149 (265)
T cd06652 77 MERTLSIFMEHMPGGSIKDQLKSY----GALTENVTRKYTRQILEGVSYLH---SNMIVHRDIKGANILRDSVGNVKLGD 149 (265)
T ss_pred CCceEEEEEEecCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEecCCCCEEECc
Confidence 234678999999999999998743 24788889999999999999999 89999999999999999999999999
Q ss_pred cCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHh
Q 011508 314 FGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKE 393 (484)
Q Consensus 314 fg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 393 (484)
||.+......... ........++..|+|||.+.+..++.++|||||||++|||++|+.||...... ... ..
T Consensus 150 fg~~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~----~~~-~~ 220 (265)
T cd06652 150 FGASKRLQTICLS----GTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAM----AAI-FK 220 (265)
T ss_pred Ccccccccccccc----ccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchH----HHH-HH
Confidence 9998765321110 11112245888999999998888999999999999999999999998642110 000 00
Q ss_pred hcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 394 ALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 394 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
... ....+. .+......+.+++.+|+. +|++||+++||++
T Consensus 221 ~~~----~~~~~~-----------------------~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 221 IAT----QPTNPV-----------------------LPPHVSDHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred Hhc----CCCCCC-----------------------CchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 000 000000 012224567788888884 9999999999875
No 281
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=2.9e-37 Score=293.14 Aligned_cols=276 Identities=22% Similarity=0.292 Sum_probs=195.9
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCc
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
++|++.+.||+|++|.||+|+.. .++..||+|++..... ...+.+.+|+.++++++|+|++++++++. ...
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~--~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~~ 73 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNR--ETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFR-----RKR 73 (286)
T ss_pred CceeeeeeecccCCeEEEEEEEC--CCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEe-----eCC
Confidence 46888999999999999999854 3578899998864432 23356789999999999999999999854 345
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCc
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGL 316 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 316 (484)
..++||||+++++|..++.. ...+++..++.++.|++.||+||| +.+++||||||+||+++.++.++|+|||+
T Consensus 74 ~~~~v~e~~~~~~l~~~~~~----~~~~~~~~~~~~~~ql~~~l~~LH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~ 146 (286)
T cd07847 74 KLHLVFEYCDHTVLNELEKN----PRGVPEHLIKKIIWQTLQAVNFCH---KHNCIHRDVKPENILITKQGQIKLCDFGF 146 (286)
T ss_pred EEEEEEeccCccHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCChhhEEEcCCCcEEECcccc
Confidence 78999999999888877652 235899999999999999999999 89999999999999999999999999999
Q ss_pred ccccccccccCCCCccccccccccccccCccccCC-CCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHH---H
Q 011508 317 AKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFV---K 392 (484)
Q Consensus 317 a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~---~ 392 (484)
+........ ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||........ +.... .
T Consensus 147 ~~~~~~~~~-------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~-~~~~~~~~~ 218 (286)
T cd07847 147 ARILTGPGD-------DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQ-LYLIRKTLG 218 (286)
T ss_pred ceecCCCcc-------cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhC
Confidence 987643221 1122347788999998765 4578999999999999999999999975432111 11110 0
Q ss_pred hhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 393 EALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 393 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
...+ ......+..-............ ....+ ......+..+.+++.+||+.+|++|||+.|++.
T Consensus 219 ~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 219 DLIP-RHQQIFSTNQFFKGLSIPEPET---REPLE-SKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred CCCh-HHhhhcccccccccccCCCccc---ccCHH-HHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 1111 0011111000000000000000 00000 000112467889999999999999999999875
No 282
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=4.3e-37 Score=289.77 Aligned_cols=255 Identities=25% Similarity=0.366 Sum_probs=193.1
Q ss_pred CCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCcc----------chHHHHHHHHHHHcCCCCCceeEeeeeee
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRG----------ASKSFIAECQALRSIRHRNLVKIITSCVS 229 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~----------~~~~~~~e~~~l~~l~h~niv~~~~~~~~ 229 (484)
+|.+.+.||+|+||.||+|.. ..+++.+|+|.++..... ..+.+.+|+.+++.++|+|++++++++.
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~--~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~- 78 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALN--VTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFET- 78 (272)
T ss_pred ceeecceecccCceEEEEEee--cCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEec-
Confidence 467789999999999999984 345778999988642110 1245788999999999999999999853
Q ss_pred eccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCce
Q 011508 230 VDFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTA 309 (484)
Q Consensus 230 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~ 309 (484)
.....++||||+++++|.+++... ..+++..+..++.|++.||.||| +++++||||+|+||+++.++.+
T Consensus 79 ----~~~~~~lv~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~~~nil~~~~~~~ 147 (272)
T cd06629 79 ----TEEYLSIFLEYVPGGSIGSCLRTY----GRFEEQLVRFFTEQVLEGLAYLH---SKGILHRDLKADNLLVDADGIC 147 (272)
T ss_pred ----cCCceEEEEecCCCCcHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHh---hCCeeecCCChhhEEEcCCCeE
Confidence 345789999999999999999743 35889999999999999999999 8999999999999999999999
Q ss_pred EEcccCcccccccccccCCCCccccccccccccccCccccCCCC--CCcccceehhhHHHHHHHhCCCCCCCCccCCccH
Q 011508 310 HVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSE--VSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTL 387 (484)
Q Consensus 310 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~--~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~ 387 (484)
+|+|||++........ ........++..|+|||...... ++.++|+||||+++|++++|..||..... .
T Consensus 148 ~l~d~~~~~~~~~~~~-----~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~----~ 218 (272)
T cd06629 148 KISDFGISKKSDDIYD-----NDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEA----I 218 (272)
T ss_pred EEeecccccccccccc-----ccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcch----H
Confidence 9999999876532110 11122345788999999877654 78999999999999999999999854211 1
Q ss_pred hHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 388 HNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 388 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
..... .........+.... ..+++..+.+++..|++.+|++|||++||++
T Consensus 219 ~~~~~-~~~~~~~~~~~~~~-----------------------~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 219 AAMFK-LGNKRSAPPIPPDV-----------------------SMNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred HHHHH-hhccccCCcCCccc-----------------------cccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 11110 00000000000000 1123567899999999999999999999976
No 283
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=4.2e-37 Score=288.93 Aligned_cols=261 Identities=26% Similarity=0.344 Sum_probs=200.9
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC-ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH-RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
++|++.+.||.|+||.||+|.... ++..+++|++.... ....+.+.+|+++++.++|+|++++++.+. .+..
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~--~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~ 73 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLP--NNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFV-----VGDE 73 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcC--CCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEe-----eCCE
Confidence 468899999999999999998543 56789999987543 234567899999999999999999998853 3457
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
.++|+|++++++|.+++..... ...+++..+..++.|++.||+||| +.+++||||+|+||++++++.++|+|||++
T Consensus 74 ~~iv~e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~ql~~al~~lh---~~~i~h~~l~p~ni~~~~~~~~~l~df~~~ 149 (267)
T cd06610 74 LWLVMPYLSGGSLLDIMKSSYP-RGGLDEAIIATVLKEVLKGLEYLH---SNGQIHRDIKAGNILLGEDGSVKIADFGVS 149 (267)
T ss_pred EEEEEeccCCCcHHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHhEEEcCCCCEEEcccchH
Confidence 8999999999999999975332 235899999999999999999999 899999999999999999999999999998
Q ss_pred cccccccccCCCCccccccccccccccCccccCCC-CCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcc
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGS-EVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALP 396 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 396 (484)
..+....... ........++..|+|||++... .++.++|+|||||++|+|++|+.||...... ....+....
T Consensus 150 ~~~~~~~~~~---~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~-~~~~~~~~~--- 222 (267)
T cd06610 150 ASLADGGDRT---RKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPM-KVLMLTLQN--- 222 (267)
T ss_pred HHhccCcccc---ccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChh-hhHHHHhcC---
Confidence 7764432111 0112234588999999988776 7899999999999999999999999653221 111111110
Q ss_pred hhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 397 ERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 397 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
..+.+.... ....++..+.+++..|++.||++||+++|+++
T Consensus 223 ------~~~~~~~~~------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 223 ------DPPSLETGA------------------DYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred ------CCCCcCCcc------------------ccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 000000000 01223567899999999999999999999975
No 284
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.9e-38 Score=305.39 Aligned_cols=247 Identities=28% Similarity=0.455 Sum_probs=196.3
Q ss_pred ccCccccccceeEEEEEEcCCCCeeEEEEEEeec----cCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCcee
Q 011508 163 LENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNL----QHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFE 238 (484)
Q Consensus 163 ~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~----~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 238 (484)
....||+|+|-+||+|. +..++..||=-.++. ......+.|..|+.+|+.|+|+||++++.++.+.. +...
T Consensus 44 ~~evLGrGafKtVYka~--De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~---n~~i 118 (632)
T KOG0584|consen 44 FDEVLGRGAFKTVYKAF--DEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTD---NKTI 118 (632)
T ss_pred hhhhcccccceeeeecc--ccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCC---Ccee
Confidence 34689999999999998 555566565332221 22334578999999999999999999999976543 4567
Q ss_pred eEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCC-CceEEcccCcc
Q 011508 239 ALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGE-LTAHVSDFGLA 317 (484)
Q Consensus 239 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~-~~~kl~Dfg~a 317 (484)
-+|+|.|..|+|..|+++.+ .++...+..|++||++||.|||+. ..+|+|||||.+||+|+++ |.|||+|+|+|
T Consensus 119 n~iTEL~TSGtLr~Y~kk~~----~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLA 193 (632)
T KOG0584|consen 119 NFITELFTSGTLREYRKKHR----RVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLA 193 (632)
T ss_pred eeeeecccCCcHHHHHHHhc----cCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHH
Confidence 89999999999999998665 377889999999999999999976 7899999999999999765 79999999999
Q ss_pred cccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcch
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPE 397 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 397 (484)
....... .....||+.|||||... ..|.+..||||||+.++||+|+..||..-......+.+......|.
T Consensus 194 tl~r~s~---------aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~ 263 (632)
T KOG0584|consen 194 TLLRKSH---------AKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPA 263 (632)
T ss_pred HHhhccc---------cceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHH
Confidence 9874322 22367999999999866 7899999999999999999999999976433333333333333344
Q ss_pred hhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 398 RLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 398 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
.+..+-| +++.++|.+|+.. .++|||+.|++.
T Consensus 264 sl~kV~d-------------------------------Pevr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 264 ALSKVKD-------------------------------PEVREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred HhhccCC-------------------------------HHHHHHHHHHhcC-chhccCHHHHhh
Confidence 3444333 3578899999999 999999999985
No 285
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=9.4e-38 Score=297.80 Aligned_cols=249 Identities=23% Similarity=0.300 Sum_probs=194.6
Q ss_pred CCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCceeeE
Q 011508 161 FSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFEAL 240 (484)
Q Consensus 161 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 240 (484)
|.....||+|+||.||+|... .++..||+|.+........+.+.+|+.++..++|||++++++++. .++..++
T Consensus 23 ~~~~~~ig~g~~g~v~~~~~~--~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~-----~~~~~~i 95 (297)
T cd06659 23 LENYIKIGEGSTGIVCIAREK--HSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYL-----VGEELWV 95 (297)
T ss_pred HHhhhhcCCCCceeEEEEEEc--CCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhhee-----eCCeEEE
Confidence 344567999999999999843 356789999987655555567889999999999999999999854 3457899
Q ss_pred EeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccccc
Q 011508 241 VYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFL 320 (484)
Q Consensus 241 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~ 320 (484)
|+||+++++|.+++.. ..+++..++.++.|++.||+||| +.+++||||||+||+++.++.+||+|||++...
T Consensus 96 v~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~ 167 (297)
T cd06659 96 LMEFLQGGALTDIVSQ-----TRLNEEQIATVCESVLQALCYLH---SQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQI 167 (297)
T ss_pred EEecCCCCCHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHeEEccCCcEEEeechhHhhc
Confidence 9999999999998753 34889999999999999999999 899999999999999999999999999998754
Q ss_pred ccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchhhh
Q 011508 321 PEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPERLA 400 (484)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 400 (484)
.... .......++..|+|||++.+..++.++|||||||++|||++|+.||...... ........
T Consensus 168 ~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~--~~~~~~~~------- 231 (297)
T cd06659 168 SKDV-------PKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPV--QAMKRLRD------- 231 (297)
T ss_pred cccc-------ccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHhc-------
Confidence 3221 1112345889999999998888999999999999999999999998642111 00000000
Q ss_pred hhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 401 EIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 401 ~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
........ .......+.+++..|++.+|++||+++|+++.
T Consensus 232 -~~~~~~~~---------------------~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 232 -SPPPKLKN---------------------AHKISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred -cCCCCccc---------------------cCCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 00000000 01124568899999999999999999999984
No 286
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=2.9e-37 Score=288.50 Aligned_cols=248 Identities=27% Similarity=0.330 Sum_probs=194.2
Q ss_pred CCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc-----cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCC
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR-----GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQG 234 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 234 (484)
+|+..+.||+|++|.||+|... .++..|++|.+..... ...+.+.+|+.+++.++|+|++++++++. .
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~--~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~ 73 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNL--DDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTER-----E 73 (258)
T ss_pred CccccceeeecCCceEEEEEEc--CCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEe-----c
Confidence 4677889999999999999854 3567899999875432 23467889999999999999999999853 4
Q ss_pred CceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEccc
Q 011508 235 NDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDF 314 (484)
Q Consensus 235 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 314 (484)
+...++|+||+++++|.+++... ..+++..++.++.|++.|++||| +.+++|+||+|+||+++.++.+||+||
T Consensus 74 ~~~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~~~ni~~~~~~~~kl~d~ 146 (258)
T cd06632 74 EDNLYIFLELVPGGSLAKLLKKY----GSFPEPVIRLYTRQILLGLEYLH---DRNTVHRDIKGANILVDTNGVVKLADF 146 (258)
T ss_pred CCeEEEEEEecCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEccC
Confidence 45789999999999999999743 24889999999999999999999 899999999999999999999999999
Q ss_pred CcccccccccccCCCCccccccccccccccCccccCCCC-CCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHh
Q 011508 315 GLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSE-VSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKE 393 (484)
Q Consensus 315 g~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 393 (484)
|.+....... ......++..|+|||.+.... ++.++|+||||+++|+|++|+.||...... . ....
T Consensus 147 ~~~~~~~~~~--------~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~----~-~~~~ 213 (258)
T cd06632 147 GMAKQVVEFS--------FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGV----A-AVFK 213 (258)
T ss_pred ccceeccccc--------cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHH----H-HHHH
Confidence 9987653221 112345788999999887766 899999999999999999999999753210 0 0000
Q ss_pred hcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 394 ALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 394 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
. ..... .. ..+..+...+.+++.+||+.+|++||++.+++.
T Consensus 214 ~-----~~~~~--~~--------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 214 I-----GRSKE--LP--------------------PIPDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred H-----Hhccc--CC--------------------CcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 0 00000 00 001122456889999999999999999999975
No 287
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=6.5e-37 Score=287.13 Aligned_cols=253 Identities=26% Similarity=0.344 Sum_probs=201.4
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
++|++.+.||+|++|.||+|+.. .++..|++|++..... .....+.+|+..+.+++|+|++++++++. ....
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~--~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~ 73 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHK--PTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFY-----KEGE 73 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEc--CCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-----cCCe
Confidence 36888899999999999999854 3578899999876543 34567999999999999999999999854 3458
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC-CCeeecCCCCCCeeecCCCceEEcccCc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCE-TPIVHCDLKPSNVLLDGELTAHVSDFGL 316 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 316 (484)
.++||||+++++|.+++... ..+++..++.++.|+++|++||| + .+++||||+|+||+++.++.++|+|||.
T Consensus 74 ~~lv~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~~l~~~l~~lh---~~~~~~H~~l~~~ni~~~~~~~~~l~df~~ 146 (264)
T cd06623 74 ISIVLEYMDGGSLADLLKKV----GKIPEPVLAYIARQILKGLDYLH---TKRHIIHRDIKPSNLLINSKGEVKIADFGI 146 (264)
T ss_pred EEEEEEecCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHh---ccCCCccCCCCHHHEEECCCCCEEEccCcc
Confidence 89999999999999999743 45899999999999999999999 8 9999999999999999999999999999
Q ss_pred ccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcc
Q 011508 317 AKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALP 396 (484)
Q Consensus 317 a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 396 (484)
+........ ......++..|+|||.+....++.++||||||+++|+|+||+.||...... ...+...
T Consensus 147 ~~~~~~~~~-------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~--~~~~~~~---- 213 (264)
T cd06623 147 SKVLENTLD-------QCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQP--SFFELMQ---- 213 (264)
T ss_pred ceecccCCC-------cccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccccc--CHHHHHH----
Confidence 886633221 112345788999999998888999999999999999999999999764321 1111111
Q ss_pred hhhhhhcCcccccccccccchhhhhhhccccccchhH-HHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 397 ERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKE-CLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 397 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
.+........ ... ++..+.+++..|++.+|++||++.|+++.
T Consensus 214 ----~~~~~~~~~~--------------------~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 214 ----AICDGPPPSL--------------------PAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred ----HHhcCCCCCC--------------------CcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 1111000000 011 35678999999999999999999999874
No 288
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=2.5e-37 Score=294.37 Aligned_cols=202 Identities=27% Similarity=0.415 Sum_probs=166.0
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCc
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
-++|++.+.||+|++|.||+|... .+++.||+|.+..... .....+.+|++++++++|+||+++++++ ..++
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~--~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~ 76 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSK--LTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDII-----HTKK 76 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEc--CCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEE-----ecCC
Confidence 367899999999999999999843 3567899999875432 2234577899999999999999999985 3455
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCc
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGL 316 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 316 (484)
..++||||+. ++|.+++.... ..+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||.
T Consensus 77 ~~~lv~e~~~-~~L~~~~~~~~---~~~~~~~~~~~~~ql~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~ 149 (291)
T cd07844 77 TLTLVFEYLD-TDLKQYMDDCG---GGLSMHNVRLFLFQLLRGLAYCH---QRRVLHRDLKPQNLLISERGELKLADFGL 149 (291)
T ss_pred eEEEEEecCC-CCHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHH---hCCeecccCCHHHEEEcCCCCEEECcccc
Confidence 8899999996 59999887432 35889999999999999999999 89999999999999999999999999999
Q ss_pred ccccccccccCCCCccccccccccccccCccccCC-CCCCcccceehhhHHHHHHHhCCCCCCCC
Q 011508 317 AKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-SEVSTSGDVYSFGILLLEMFTGKGPTNEM 380 (484)
Q Consensus 317 a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~ 380 (484)
++...... .......++..|+|||...+ ..++.++||||+|+++|+|++|+.||...
T Consensus 150 ~~~~~~~~-------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~ 207 (291)
T cd07844 150 ARAKSVPS-------KTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGS 207 (291)
T ss_pred ccccCCCC-------ccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 87542111 11112246788999998765 45789999999999999999999999654
No 289
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=4.5e-37 Score=296.13 Aligned_cols=259 Identities=27% Similarity=0.304 Sum_probs=198.3
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCcc---chHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRG---ASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
++|++.+.||+|++|.||+|... .++..||+|.+...... ..+.+.+|+++++.++|+||+++++.+ ..+
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~ 73 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLK--GTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASF-----QTE 73 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEc--CCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeee-----ecC
Confidence 36888899999999999999854 35788999998754322 345688999999999999999999885 345
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
...++||||+.+++|.+++.... ...+++..+..++.|++.||+||| +.+++|+||||+||+++.++.++|+|||
T Consensus 74 ~~~~lv~e~~~~~~L~~~~~~~~--~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg 148 (316)
T cd05574 74 TYLCLVMDYCPGGELFRLLQRQP--GKCLSEEVARFYAAEVLLALEYLH---LLGIVYRDLKPENILLHESGHIMLSDFD 148 (316)
T ss_pred CEEEEEEEecCCCCHHHHHHhCC--CCccCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChHHeEEcCCCCEEEeecc
Confidence 58899999999999999987432 345899999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccCCC----------------------CccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhC
Q 011508 316 LAKFLPEAANNLSS----------------------NQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTG 373 (484)
Q Consensus 316 ~a~~~~~~~~~~~~----------------------~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg 373 (484)
++............ .........|+..|+|||++.+..++.++||||||+++|+|++|
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g 228 (316)
T cd05574 149 LSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYG 228 (316)
T ss_pred hhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhC
Confidence 98765332111000 00111234678899999999988899999999999999999999
Q ss_pred CCCCCCCccCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCC
Q 011508 374 KGPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRER 453 (484)
Q Consensus 374 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R 453 (484)
+.||....... . ...+.+....... ....+..+.+++.+|++.||++|
T Consensus 229 ~~pf~~~~~~~-~------------~~~~~~~~~~~~~-------------------~~~~~~~~~~li~~~l~~~p~~R 276 (316)
T cd05574 229 TTPFKGSNRDE-T------------FSNILKKEVTFPG-------------------SPPVSSSARDLIRKLLVKDPSKR 276 (316)
T ss_pred CCCCCCCchHH-H------------HHHHhcCCccCCC-------------------ccccCHHHHHHHHHHccCCHhHC
Confidence 99996532110 0 1111111110000 00125678999999999999999
Q ss_pred CC----HHHHHH
Q 011508 454 MN----MEEVAA 461 (484)
Q Consensus 454 Pt----~~evl~ 461 (484)
|| ++|++.
T Consensus 277 ~s~~~~~~~ll~ 288 (316)
T cd05574 277 LGSKRGAAEIKQ 288 (316)
T ss_pred CCchhhHHHHHc
Confidence 99 666655
No 290
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=1.2e-37 Score=302.58 Aligned_cols=288 Identities=22% Similarity=0.247 Sum_probs=203.6
Q ss_pred hcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC-ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH-RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
.+++|++.+.||+|+||.||+|+. ..++..||+|.++... ......+.+|+.++++++|+||+++++++....+...
T Consensus 3 ~~~~y~i~~~lg~G~~g~vy~~~~--~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 80 (336)
T cd07849 3 VGPRYQNLSYIGEGAYGMVCSATH--KPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESF 80 (336)
T ss_pred cccceEEEEEEEecCCeEEEEEEE--cCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeeccccccc
Confidence 357899999999999999999984 4457889999986432 2334568889999999999999999998766555555
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
...++|+||+. ++|.+++.. ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||
T Consensus 81 ~~~~lv~e~~~-~~l~~~~~~-----~~l~~~~~~~i~~ql~~aL~~LH---~~~ivH~dlkp~Nill~~~~~~kl~dfg 151 (336)
T cd07849 81 NDVYIVQELME-TDLYKLIKT-----QHLSNDHIQYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTNCDLKICDFG 151 (336)
T ss_pred ceEEEEehhcc-cCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEECCCCCEEECccc
Confidence 67899999995 588887752 35899999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCC-CCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhh
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEA 394 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 394 (484)
++......... ........++..|+|||.+.+ ..++.++||||+||++|+|++|+.||..... ..........
T Consensus 152 ~~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~--~~~~~~~~~~ 225 (336)
T cd07849 152 LARIADPEHDH----TGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDY--LHQLNLILGV 225 (336)
T ss_pred ceeeccccccc----cCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHH
Confidence 98765332211 111223468899999998654 5689999999999999999999999965311 1111111111
Q ss_pred c----chhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH--HHHH
Q 011508 395 L----PERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ--LLSF 466 (484)
Q Consensus 395 ~----~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~--L~~i 466 (484)
. ++....+.+.............. .............++.+++.+||+.+|++|||+.|+++. ++..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~ 298 (336)
T cd07849 226 LGTPSQEDLNCIISLRARNYIKSLPFKP-----KVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQY 298 (336)
T ss_pred cCCCCHHHHHHhhchhhhhHHhhcCcCC-----cccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCcccccc
Confidence 1 11122222111100000000000 000000001125568899999999999999999999886 4444
No 291
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=5.9e-37 Score=287.46 Aligned_cols=255 Identities=28% Similarity=0.371 Sum_probs=197.2
Q ss_pred CCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCcc--chHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRG--ASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
+|.+.+.||+|+||.||+|... .++..|++|.++..... ..+.+.+|++++++++|+||+++++.+ ...+.
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~--~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~-----~~~~~ 73 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNL--DTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVE-----VHREK 73 (264)
T ss_pred CceeeeEeecCCCcEEEEEEEC--CCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeE-----ecCCE
Confidence 5788899999999999999843 35688999998765443 457889999999999999999999984 34457
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
.++|+||+++++|.+++... ..+++..+..++.|++.||+||| +.+++|+||+|+||++++++.+||+|||.+
T Consensus 74 ~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~i~~~i~~~l~~lh---~~~i~H~dl~~~nil~~~~~~~kl~d~g~~ 146 (264)
T cd06626 74 VYIFMEYCSGGTLEELLEHG----RILDEHVIRVYTLQLLEGLAYLH---SHGIVHRDIKPANIFLDHNGVIKLGDFGCA 146 (264)
T ss_pred EEEEEecCCCCcHHHHHhhc----CCCChHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEcccccc
Confidence 89999999999999999742 34788899999999999999999 899999999999999999999999999998
Q ss_pred cccccccccCCCCccccccccccccccCccccCCCC---CCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhh
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSE---VSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEA 394 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~---~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 394 (484)
........... .......++..|+|||++.+.. ++.++||||||+++|++++|+.||....... .......
T Consensus 147 ~~~~~~~~~~~---~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~-~~~~~~~-- 220 (264)
T cd06626 147 VKLKNNTTTMG---EEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEF-QIMFHVG-- 220 (264)
T ss_pred cccCCCCCccc---ccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchH-HHHHHHh--
Confidence 87644321111 1011245788999999988766 8899999999999999999999996532110 0000000
Q ss_pred cchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 395 LPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 395 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
....+.+.. ...+...+.+++.+||+.+|++|||+.|++.
T Consensus 221 ------~~~~~~~~~---------------------~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 221 ------AGHKPPIPD---------------------SLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred ------cCCCCCCCc---------------------ccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 000000000 1112556789999999999999999999874
No 292
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-38 Score=304.99 Aligned_cols=251 Identities=24% Similarity=0.328 Sum_probs=200.9
Q ss_pred CCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCceee
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFEA 239 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 239 (484)
-|.++..||.|+||.||+|.. ..++...|.|++........++|.-|++||..++||+||++++.|+ .++.+|
T Consensus 33 ~WeIiGELGDGAFGKVyKA~n--ket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy-----~enkLw 105 (1187)
T KOG0579|consen 33 HWEIIGELGDGAFGKVYKAVN--KETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYY-----FENKLW 105 (1187)
T ss_pred HHHHHhhhcCccchhhhhhhc--ccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHh-----ccCceE
Confidence 356778899999999999984 4566778889998877778889999999999999999999999853 344789
Q ss_pred EEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcccc
Q 011508 240 LVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKF 319 (484)
Q Consensus 240 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~ 319 (484)
++.|||.||-.+..+-.. .+.+++.++..+++|++.||.||| +++|||||||+.|||++-+|.++|+|||.+..
T Consensus 106 iliEFC~GGAVDaimlEL---~r~LtE~QIqvvc~q~ldALn~LH---s~~iIHRDLKAGNiL~TldGdirLADFGVSAK 179 (1187)
T KOG0579|consen 106 ILIEFCGGGAVDAIMLEL---GRVLTEDQIQVVCYQVLDALNWLH---SQNIIHRDLKAGNILLTLDGDIRLADFGVSAK 179 (1187)
T ss_pred EEEeecCCchHhHHHHHh---ccccchHHHHHHHHHHHHHHHHHh---hcchhhhhccccceEEEecCcEeeeccccccc
Confidence 999999999999887643 456999999999999999999999 99999999999999999999999999998865
Q ss_pred cccccccCCCCccccccccccccccCcccc-----CCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhh
Q 011508 320 LPEAANNLSSNQSSSVGVKGTVGYAAPEYG-----MGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEA 394 (484)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~-----~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 394 (484)
... .......+.||+.|||||+. ...+|+.++||||||++|.||..+.+|-.....- ..+.+.....
T Consensus 180 n~~-------t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpM-RVllKiaKSe 251 (1187)
T KOG0579|consen 180 NKS-------TRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPM-RVLLKIAKSE 251 (1187)
T ss_pred chh-------HHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchH-HHHHHHhhcC
Confidence 422 22333457899999999974 4568999999999999999999999997553211 0111111100
Q ss_pred cchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 395 LPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 395 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
.|.+.. +......+.+++..||..||..||++.++++
T Consensus 252 ---------PPTLlq---------------------PS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 252 ---------PPTLLQ---------------------PSHWSRSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred ---------CCcccC---------------------cchhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 011111 2233667899999999999999999999985
No 293
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=3.9e-37 Score=294.03 Aligned_cols=275 Identities=20% Similarity=0.205 Sum_probs=195.3
Q ss_pred CCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCcc-----chHHHHHHHHHHHcCCCCCceeEeeeeeeeccCC
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRG-----ASKSFIAECQALRSIRHRNLVKIITSCVSVDFQG 234 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 234 (484)
+|++.+.||+|++|.||+|... .+++.||+|.+...... ....+..|++++++++|+||+++++++..
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~--~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~----- 73 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDK--ETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGH----- 73 (298)
T ss_pred CceeeeeeeeccccEEEEEEEC--CCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeec-----
Confidence 4778899999999999999943 34678999999755432 23457789999999999999999998643
Q ss_pred CceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEccc
Q 011508 235 NDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDF 314 (484)
Q Consensus 235 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 314 (484)
+...++||||+ +++|.+++.... ..+++..++.++.|+++||+||| +++++|+||+|+||+++.++.++|+||
T Consensus 74 ~~~~~lv~e~~-~~~L~~~i~~~~---~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dl~p~nill~~~~~~~l~df 146 (298)
T cd07841 74 KSNINLVFEFM-ETDLEKVIKDKS---IVLTPADIKSYMLMTLRGLEYLH---SNWILHRDLKPNNLLIASDGVLKLADF 146 (298)
T ss_pred CCEEEEEEccc-CCCHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCChhhEEEcCCCCEEEccc
Confidence 45889999999 999999997432 35899999999999999999999 899999999999999999999999999
Q ss_pred CcccccccccccCCCCccccccccccccccCccccCC-CCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHh
Q 011508 315 GLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKE 393 (484)
Q Consensus 315 g~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 393 (484)
|++....... .......++..|+|||.+.+ ..++.++|||||||++|||++|.+||...... ..+.+....
T Consensus 147 g~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~-~~~~~~~~~ 218 (298)
T cd07841 147 GLARSFGSPN-------RKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDI-DQLGKIFEA 218 (298)
T ss_pred eeeeeccCCC-------ccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccH-HHHHHHHHH
Confidence 9998664321 11112346788999998754 46789999999999999999998777643211 111111111
Q ss_pred hcchhhhhhcCc-ccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 394 ALPERLAEIVDP-VLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 394 ~~~~~~~~~~d~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
..........+. .+......... ...............+.+++.+||+.||++|||++||++.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 219 LGTPTEENWPGVTSLPDYVEFKPF------PPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred cCCCchhhhhhccccccccccccc------CCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 000000000000 00000000000 0000000012235678999999999999999999999873
No 294
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=5e-37 Score=291.49 Aligned_cols=273 Identities=22% Similarity=0.249 Sum_probs=197.5
Q ss_pred CCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC--ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH--RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
+|++.+.||+|++|.||+|... .+++.||+|++.... ....+.+.+|+.++++++|+|++++++++. .+..
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~--~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----~~~~ 73 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDR--ETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFP-----HGSG 73 (286)
T ss_pred CceEEeecccCCCcEEEEEEEC--CCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEe-----cCCe
Confidence 4788899999999999999854 357889999987654 233467899999999999999999999853 3558
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
.++|+||+ +++|.+++.... ..+++.+++.++.|++.||+||| +.+++|+||||+||+++.++.++|+|||.+
T Consensus 74 ~~~v~e~~-~~~L~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~ 146 (286)
T cd07832 74 FVLVMEYM-PSDLSEVLRDEE---RPLPEAQVKSYMRMLLKGVAYMH---ANGIMHRDLKPANLLISADGVLKIADFGLA 146 (286)
T ss_pred eEEEeccc-CCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCHHHEEEcCCCcEEEeeeeec
Confidence 89999999 999999987433 45899999999999999999999 899999999999999999999999999998
Q ss_pred cccccccccCCCCccccccccccccccCccccCCC-CCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhc-
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGS-EVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEAL- 395 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~- 395 (484)
........ .......++..|+|||.+.+. .++.++||||+|+++|||++|++||..... ...+........
T Consensus 147 ~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~-~~~~~~~~~~~~~ 219 (286)
T cd07832 147 RLFSEEEP------RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGEND-IEQLAIVFRTLGT 219 (286)
T ss_pred ccccCCCC------CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCH-HHHHHHHHHHcCC
Confidence 86643221 112234588899999987654 468999999999999999999887754321 111111111000
Q ss_pred --chhhhhhcC---cccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 396 --PERLAEIVD---PVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 396 --~~~~~~~~d---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
+....+..+ ............ . ... ...+....+.+++.+|++.+|++|||++++++.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------~-~~~-~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 220 PNEETWPGLTSLPDYNKITFPESKPI-------P-LEE-IFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred CChHHHhhccCcchhhcccCCCCCcc-------h-HHH-hCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 000000000 000000000000 0 000 011225678999999999999999999999863
No 295
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=7e-37 Score=291.86 Aligned_cols=281 Identities=22% Similarity=0.236 Sum_probs=196.5
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCC-CCCceeEeeeeeeeccCCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIR-HRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~ 235 (484)
++|++.+.||+|+||.||+|... .+++.||+|.++.... .....+.+|+.+++.++ |+||+++++++...+....
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~--~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~ 78 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDK--NTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGK 78 (295)
T ss_pred CCceEeeEecccCCeEEEEEEEC--CCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCC
Confidence 46889999999999999999954 4578899998765432 23357888999999995 6999999998765443333
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecC-CCceEEcc
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDA-PRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDG-ELTAHVSD 313 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~-~~~~kl~D 313 (484)
...++||||+++ +|.+++...... ...+++..++.++.||+.||+||| +++|+||||+|+||+++. ++.+||+|
T Consensus 79 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~i~H~dl~~~nil~~~~~~~~kl~d 154 (295)
T cd07837 79 PSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCH---KHGVMHRDLKPQNLLVDKQKGLLKIAD 154 (295)
T ss_pred ceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChHHEEEecCCCeEEEee
Confidence 457999999975 899988754332 346899999999999999999999 899999999999999998 88999999
Q ss_pred cCcccccccccccCCCCccccccccccccccCccccCC-CCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHH
Q 011508 314 FGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVK 392 (484)
Q Consensus 314 fg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 392 (484)
||.+..+.... .......+++.|+|||++.+ ..++.++||||||+++|+|++|..||....... .+.+...
T Consensus 155 fg~~~~~~~~~-------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~-~~~~~~~ 226 (295)
T cd07837 155 LGLGRAFSIPV-------KSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQ-QLLHIFK 226 (295)
T ss_pred cccceecCCCc-------cccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHH
Confidence 99987653211 11112246788999998765 457899999999999999999999996532111 0111111
Q ss_pred hhc-chh--hhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 393 EAL-PER--LAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 393 ~~~-~~~--~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
... +.. .....+......... ..+.......+....++.+++.+||+.||++||++.|++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 227 LLGTPTEQVWPGVSKLRDWHEFPQ--------WKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred HhCCCChhhCcchhhccchhhcCc--------ccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 000 000 000000000000000 0000000001223567899999999999999999999875
No 296
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=4.7e-37 Score=300.39 Aligned_cols=285 Identities=19% Similarity=0.198 Sum_probs=198.9
Q ss_pred hcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC--ccchHHHHHHHHHHHcCCCCCceeEeeeeeeec-cC
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH--RGASKSFIAECQALRSIRHRNLVKIITSCVSVD-FQ 233 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~ 233 (484)
..++|++.+.||+|+||.||+|.. ..+++.||+|.+.... ......+.+|+.++++++|+||+++++++.... +.
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~--~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 91 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYD--TVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLE 91 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEE--CCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcc
Confidence 457899999999999999999984 4457889999986432 223456778999999999999999999864322 12
Q ss_pred CCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcc
Q 011508 234 GNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSD 313 (484)
Q Consensus 234 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~D 313 (484)
+....++||||+ .++|.+.+.. .++...+..++.|++.||+||| ..+|+||||||+||+++.++.+||+|
T Consensus 92 ~~~~~~lv~e~~-~~~l~~~~~~------~l~~~~~~~~~~ql~~aL~~LH---~~gi~H~dlkp~Nil~~~~~~~kL~D 161 (353)
T cd07850 92 EFQDVYLVMELM-DANLCQVIQM------DLDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILD 161 (353)
T ss_pred ccCcEEEEEecc-CCCHHHHHhh------cCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEcc
Confidence 334579999999 4688888752 2788899999999999999999 89999999999999999999999999
Q ss_pred cCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHh
Q 011508 314 FGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKE 393 (484)
Q Consensus 314 fg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 393 (484)
||.++...... ......++..|+|||.+.+..++.++|||||||++|+|++|+.||...... ..+......
T Consensus 162 fg~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~-~~~~~~~~~ 232 (353)
T cd07850 162 FGLARTAGTSF--------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHI-DQWNKIIEQ 232 (353)
T ss_pred CccceeCCCCC--------CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHHh
Confidence 99998653221 112235788999999999989999999999999999999999999653211 111111110
Q ss_pred hc--chhhhhhcCcccccccccccchhh----hh----hhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 394 AL--PERLAEIVDPVLLVEREEGETSEA----NA----HKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 394 ~~--~~~~~~~~d~~l~~~~~~~~~~~~----~~----~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
.. +....+.++............... .. ..+............++.+++.+||+.||++|||+.|+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 233 LGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred cCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00 001111111111000000000000 00 00000000011235678899999999999999999999864
No 297
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=8.2e-37 Score=290.01 Aligned_cols=255 Identities=26% Similarity=0.318 Sum_probs=201.2
Q ss_pred HhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 156 KATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 156 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
..++.|+..+.||+|++|.||+|.... ++..+++|++..... ..+.+.+|+++++.++|+|++++++++.. +
T Consensus 16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~--~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~ 87 (286)
T cd06614 16 DPRELYKNLEKIGEGASGEVYKATDRA--TGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLV-----G 87 (286)
T ss_pred CccccchHhHhccCCCCeEEEEEEEcc--CCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEE-----C
Confidence 355678889999999999999998543 467899999976544 45678899999999999999999998654 3
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
...++|+||+++++|.+++.... ..+++..++.++.|++.||+||| +.+++|+||+|+||+++.++.++|+|||
T Consensus 88 ~~~~lv~e~~~~~~L~~~l~~~~---~~l~~~~~~~i~~~i~~~L~~lH---~~gi~H~dl~p~ni~i~~~~~~~l~d~~ 161 (286)
T cd06614 88 DELWVVMEYMDGGSLTDIITQNF---VRMNEPQIAYVCREVLQGLEYLH---SQNVIHRDIKSDNILLSKDGSVKLADFG 161 (286)
T ss_pred CEEEEEEeccCCCcHHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCChhhEEEcCCCCEEECccc
Confidence 48899999999999999998543 35899999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhc
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEAL 395 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 395 (484)
.+....... .......++..|+|||.+.+..++.++|||||||++|+|++|+.||....... ....
T Consensus 162 ~~~~~~~~~-------~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~-~~~~------ 227 (286)
T cd06614 162 FAAQLTKEK-------SKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLR-ALFL------ 227 (286)
T ss_pred hhhhhccch-------hhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHH-HHHH------
Confidence 887553221 11122347789999999988889999999999999999999999986431110 0000
Q ss_pred chhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 396 PERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 396 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
+....... ......++..+.+++.+|++.+|.+|||+.++++.
T Consensus 228 ------~~~~~~~~------------------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 270 (286)
T cd06614 228 ------ITTKGIPP------------------LKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQH 270 (286)
T ss_pred ------HHhcCCCC------------------CcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 00000000 00012235678999999999999999999999864
No 298
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=2e-37 Score=294.28 Aligned_cols=271 Identities=24% Similarity=0.321 Sum_probs=195.8
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCc
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
++|++.+.||+|+||.||+|... .+++.||+|++..... ...+.+.+|+++++.++||||+++++++ ..+.
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~--~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~ 73 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHK--ETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVF-----RRKK 73 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEEC--CCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhc-----ccCC
Confidence 46888999999999999999954 3467899998764332 2345788999999999999999999985 4455
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCc
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGL 316 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 316 (484)
..++|+||+++++|..+... ...+++..++.++.|++.||+||| +.+++|+||+|+||++++++.++|+|||+
T Consensus 74 ~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~h~~l~p~ni~~~~~~~~~l~dfg~ 146 (286)
T cd07846 74 RLYLVFEFVDHTVLDDLEKY----PNGLDESRVRKYLFQILRGIEFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGF 146 (286)
T ss_pred eEEEEEecCCccHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCcEEEEeeee
Confidence 88999999999988887652 234899999999999999999999 88999999999999999999999999999
Q ss_pred ccccccccccCCCCccccccccccccccCccccCC-CCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHH--h
Q 011508 317 AKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVK--E 393 (484)
Q Consensus 317 a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~--~ 393 (484)
+....... .......++..|+|||++.+ ..++.++||||||+++|||++|+.||...... ..+..... .
T Consensus 147 ~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~-~~~~~~~~~~~ 218 (286)
T cd07846 147 ARTLAAPG-------EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDI-DQLYHIIKCLG 218 (286)
T ss_pred eeeccCCc-------cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchH-HHHHHHHHHhC
Confidence 87653321 11122457889999998765 45788999999999999999999998643210 00111000 0
Q ss_pred hcchhhhhhcCc------ccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 394 ALPERLAEIVDP------VLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 394 ~~~~~~~~~~d~------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
..........+. ....+.... .... .....++..+.+++.+||+.+|++||++.++++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-----~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 219 NLIPRHQEIFQKNPLFAGMRLPEVKEI-----EPLE-----KRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred CCchhhHHHhccchHhhccccccccCc-----chHH-----HhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 001111111110 000000000 0000 001233567899999999999999999999875
No 299
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=7.6e-37 Score=289.93 Aligned_cols=248 Identities=23% Similarity=0.300 Sum_probs=194.6
Q ss_pred CCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCceeeE
Q 011508 161 FSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFEAL 240 (484)
Q Consensus 161 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 240 (484)
|...+.||+|++|.||++... .++..+++|++........+.+.+|+.+++.++|+|++++++++. ..+..++
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~--~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~-----~~~~~~~ 93 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDK--STGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYL-----VGDELWV 93 (285)
T ss_pred hhcceEeccCCCeEEEEEEEC--CCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEE-----cCCeEEE
Confidence 445579999999999999843 356789999987655445567889999999999999999999854 3457899
Q ss_pred EeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccccc
Q 011508 241 VYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFL 320 (484)
Q Consensus 241 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~ 320 (484)
|+||+++++|.+++.. ..+++..+..++.|++.||+||| +++++||||+|+||+++.++.++|+|||.+...
T Consensus 94 v~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~ql~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~ 165 (285)
T cd06648 94 VMEFLEGGALTDIVTH-----TRMNEEQIATVCLAVLKALSFLH---AQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQV 165 (285)
T ss_pred EEeccCCCCHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChhhEEEcCCCcEEEcccccchhh
Confidence 9999999999999874 34889999999999999999999 899999999999999999999999999987754
Q ss_pred ccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchhhh
Q 011508 321 PEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPERLA 400 (484)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 400 (484)
.... .......|+..|+|||...+..++.++|||||||++|||++|+.||..... ...... +.
T Consensus 166 ~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~-----~~~~~~-----~~ 228 (285)
T cd06648 166 SKEV-------PRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPP-----LQAMKR-----IR 228 (285)
T ss_pred ccCC-------cccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCH-----HHHHHH-----HH
Confidence 3221 111224588999999999888899999999999999999999999864211 111110 00
Q ss_pred hhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 401 EIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 401 ~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
....+.+.. ...++..+.+++.+||+.+|++|||+.++++
T Consensus 229 ~~~~~~~~~---------------------~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 229 DNLPPKLKN---------------------LHKVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred hcCCCCCcc---------------------cccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 000000000 1112557899999999999999999999986
No 300
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=4.8e-37 Score=291.36 Aligned_cols=273 Identities=22% Similarity=0.261 Sum_probs=193.4
Q ss_pred CCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
+|+..+.||.|++|.||+|+.. .++..||||.++.... .....+.+|++++++++||||+++++++ .+++.
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~--~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~ 73 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNK--LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVI-----HTENK 73 (284)
T ss_pred CceeeeeecCCCceEEEEEEEC--CCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhc-----ccCCc
Confidence 4788899999999999999853 4567899998875432 2235788999999999999999999985 34558
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
.++||||+. ++|.+++.... ...+++..++.++.|++.||+||| +.+++|+||+|+||+++.++.+||+|||.+
T Consensus 74 ~~~v~e~~~-~~l~~~~~~~~--~~~l~~~~~~~~~~~i~~~l~~lh---~~~i~H~~l~p~nill~~~~~~~l~dfg~~ 147 (284)
T cd07860 74 LYLVFEFLH-QDLKKFMDASP--LSGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA 147 (284)
T ss_pred EEEEeeccc-cCHHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEeeccch
Confidence 899999995 68999886432 345899999999999999999999 899999999999999999999999999998
Q ss_pred cccccccccCCCCccccccccccccccCccccCCCC-CCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcc
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSE-VSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALP 396 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 396 (484)
....... .......++..|+|||...+.. ++.++||||||+++|||+||+.||...... ....+.......
T Consensus 148 ~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~-~~~~~~~~~~~~ 219 (284)
T cd07860 148 RAFGVPV-------RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFRTLGT 219 (284)
T ss_pred hhcccCc-------cccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHHHhCC
Confidence 7653221 1112234678899999876644 688999999999999999999999653211 111111111000
Q ss_pred h-h-hhhhcCc--ccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 397 E-R-LAEIVDP--VLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 397 ~-~-~~~~~d~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
. . ....... .......... . ...... ......++.+++.+|++.||++|||++|+++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~~-~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 220 PDEVVWPGVTSLPDYKPSFPKWA--R-----QDFSKV-VPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred CChhhhhhhhHHHHHHhhccccc--c-----cCHHHH-cccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 0 0 0000000 0000000000 0 000000 0112456789999999999999999999975
No 301
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=4.2e-37 Score=292.34 Aligned_cols=277 Identities=23% Similarity=0.307 Sum_probs=197.4
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC--ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCc
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH--RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
++|++.+.||+|++|.||+|+.. .++..||+|+++... ....+.+.+|++++++++|+||+++++++.. ++
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~--~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~ 73 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNK--ATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRR-----KG 73 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeC--CCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEE-----CC
Confidence 36889999999999999999854 346789999887543 2234678999999999999999999998643 44
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCc
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGL 316 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 316 (484)
..++||||++++.+..+... ...+++.+++.++.|++.||+||| ..+++|+||+|+||++++++.+||+|||.
T Consensus 74 ~~~iv~e~~~~~~l~~~~~~----~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~~~ni~~~~~~~~kl~d~g~ 146 (288)
T cd07833 74 RLYLVFEYVERTLLELLEAS----PGGLPPDAVRSYIWQLLQAIAYCH---SHNIIHRDIKPENILVSESGVLKLCDFGF 146 (288)
T ss_pred EEEEEEecCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEEeeec
Confidence 78999999988766665542 234899999999999999999999 89999999999999999999999999999
Q ss_pred ccccccccccCCCCccccccccccccccCccccCCC-CCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHH--h
Q 011508 317 AKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGS-EVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVK--E 393 (484)
Q Consensus 317 a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~--~ 393 (484)
+........ .......++..|+|||++.+. .++.++||||||+++|+|++|+.||....... .+..... .
T Consensus 147 ~~~~~~~~~------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~-~~~~~~~~~~ 219 (288)
T cd07833 147 ARALRARPA------SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDID-QLYLIQKCLG 219 (288)
T ss_pred ccccCCCcc------ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhC
Confidence 887643321 111234578889999998887 88999999999999999999999986532111 0000000 0
Q ss_pred hcchhhhhhc--CcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 394 ALPERLAEIV--DPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 394 ~~~~~~~~~~--d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
..+....... ++..... ........ .......+..++.++.+++.+||+.+|++|||++++++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 220 PLPPSHQELFSSNPRFAGV----AFPEPSQP-ESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred CCCHHHhhhcccCcccccc----ccCCCCCc-HHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 0111100000 0000000 00000000 00000001223677999999999999999999999875
No 302
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=5.8e-37 Score=291.60 Aligned_cols=245 Identities=27% Similarity=0.313 Sum_probs=194.8
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
++|++.+.||+|++|.||++.... +++.+|+|++.... ....+.+.+|++++++++||||+++++++ ..+
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~--~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~ 73 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKG--SGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSF-----QDD 73 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcC--CCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEE-----EcC
Confidence 468899999999999999999543 56889999987532 22346788999999999999999999985 344
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
...++||||+++++|.+++... ..+++..+..++.|++.||+||| +.+++|+||+|+||+++.++.+||+|||
T Consensus 74 ~~~~~v~e~~~~~~L~~~~~~~----~~l~~~~~~~~~~qil~~l~~lH---~~~i~H~dl~p~nili~~~~~~kl~dfg 146 (290)
T cd05580 74 SNLYLVMEYVPGGELFSHLRKS----GRFPEPVARFYAAQVVLALEYLH---SLDIVYRDLKPENLLLDSDGYIKITDFG 146 (290)
T ss_pred CeEEEEEecCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEeeCC
Confidence 5889999999999999999743 35889999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhc
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEAL 395 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 395 (484)
++...... .....+++.|+|||.+.+...+.++||||||+++|+|++|+.||..... .....
T Consensus 147 ~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~--- 208 (290)
T cd05580 147 FAKRVKGR----------TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNP-----IQIYE--- 208 (290)
T ss_pred CccccCCC----------CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH-----HHHHH---
Confidence 98765322 1223588999999998888889999999999999999999999865321 00000
Q ss_pred chhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCC-----CHHHHHH
Q 011508 396 PERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERM-----NMEEVAA 461 (484)
Q Consensus 396 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~ 461 (484)
.+....... +......+.+++.+||+.||.+|| +++|+++
T Consensus 209 -----~~~~~~~~~---------------------~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~ 253 (290)
T cd05580 209 -----KILEGKVRF---------------------PSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN 253 (290)
T ss_pred -----HHhcCCccC---------------------CccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHc
Confidence 011000000 111145678999999999999999 7777763
No 303
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=1e-36 Score=288.06 Aligned_cols=249 Identities=25% Similarity=0.360 Sum_probs=194.1
Q ss_pred CCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC-ccchHHHHHHHHHHHcCC---CCCceeEeeeeeeeccCCC
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH-RGASKSFIAECQALRSIR---HRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~~ 235 (484)
.|+..+.||+|+||.||+|... .++..||+|.++... ....+.+.+|+.++++++ |||++++++++. .+
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~--~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~-----~~ 74 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHV--PTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYL-----KG 74 (277)
T ss_pred hhhhhhheeccCCceEEEEEEc--CCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeee-----eC
Confidence 4777889999999999999953 357889999987543 234467889999999996 999999999864 34
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
...++||||+++++|.+++... .+++..++.++.|++.||.||| +.+++|+||+|+||++++++.++|+|||
T Consensus 75 ~~~~lv~e~~~~~~L~~~~~~~-----~l~~~~~~~i~~~i~~~l~~lh---~~~i~H~dl~p~ni~i~~~~~~~l~dfg 146 (277)
T cd06917 75 PRLWIIMEYAEGGSVRTLMKAG-----PIAEKYISVIIREVLVALKYIH---KVGVIHRDIKAANILVTNTGNVKLCDFG 146 (277)
T ss_pred CEEEEEEecCCCCcHHHHHHcc-----CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcCHHHEEEcCCCCEEEccCC
Confidence 5789999999999999998632 5889999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCC-CCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhh
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEA 394 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 394 (484)
.+....... .......|+..|+|||.+.+ ..++.++|||||||++|+|++|+.||...... .....
T Consensus 147 ~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~-----~~~~~- 213 (277)
T cd06917 147 VAALLNQNS-------SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAF-----RAMML- 213 (277)
T ss_pred ceeecCCCc-------cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChh-----hhhhc-
Confidence 988664322 11223458889999998765 45689999999999999999999999653111 11000
Q ss_pred cchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 395 LPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 395 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
+.....+.+. ....+.++.+++.+||+.||++||++.|+++.
T Consensus 214 ----~~~~~~~~~~----------------------~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 214 ----IPKSKPPRLE----------------------DNGYSKLLREFVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred ----cccCCCCCCC----------------------cccCCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence 0000000000 01125578899999999999999999999864
No 304
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=1.2e-36 Score=291.94 Aligned_cols=248 Identities=25% Similarity=0.338 Sum_probs=192.3
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc---cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCC
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR---GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQG 234 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 234 (484)
...|...+.||+|+||.||+|+.. .++..||+|.+..... .....+.+|+++++.++|||+++++++|..
T Consensus 14 ~~~y~~~~~lg~g~~g~vy~~~~~--~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~----- 86 (307)
T cd06607 14 EKLFTDLREIGHGSFGAVYFARDV--RTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLR----- 86 (307)
T ss_pred chhhhhheeecCCCCeEEEEEEEc--CCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEe-----
Confidence 356888899999999999999854 3567899998864432 223568899999999999999999999654
Q ss_pred CceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEccc
Q 011508 235 NDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDF 314 (484)
Q Consensus 235 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 314 (484)
+...++|+||+. |++.+++.... ..+++..+..++.|++.||.||| +.+++||||+|+||+++.++.++|+||
T Consensus 87 ~~~~~lv~e~~~-g~l~~~~~~~~---~~l~~~~~~~~~~ql~~~L~~LH---~~~i~H~dl~p~nIl~~~~~~~kL~df 159 (307)
T cd06607 87 EHTAWLVMEYCL-GSASDILEVHK---KPLQEVEIAAICHGALQGLAYLH---SHERIHRDIKAGNILLTEPGTVKLADF 159 (307)
T ss_pred CCeEEEEHHhhC-CCHHHHHHHcc---cCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEECCCCCEEEeec
Confidence 347899999995 67877775332 35899999999999999999999 899999999999999999999999999
Q ss_pred CcccccccccccCCCCccccccccccccccCccccC---CCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHH
Q 011508 315 GLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGM---GSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFV 391 (484)
Q Consensus 315 g~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 391 (484)
|++...... ....++..|+|||++. ...++.++||||||+++|||+||+.||...... ...
T Consensus 160 g~~~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~-----~~~ 223 (307)
T cd06607 160 GSASLVSPA-----------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-----SAL 223 (307)
T ss_pred CcceecCCC-----------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHH-----HHH
Confidence 998754321 1234778899999874 456889999999999999999999998643110 000
Q ss_pred HhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 392 KEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 392 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
. .+.... . .......+...+.+++.+||+.+|++||++.+|+..
T Consensus 224 ~--------~~~~~~----~---------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 224 Y--------HIAQND----S---------------PTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred H--------HHhcCC----C---------------CCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 0 000000 0 000012345678999999999999999999999874
No 305
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=1.2e-36 Score=287.43 Aligned_cols=247 Identities=26% Similarity=0.368 Sum_probs=194.6
Q ss_pred CCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC-ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCceee
Q 011508 161 FSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH-RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFEA 239 (484)
Q Consensus 161 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 239 (484)
|++.+.||+|+||.||+|... .++..||+|.+.... ......+.+|+.++.+++||||+++++++. .+...+
T Consensus 6 ~~~~~~ig~G~~~~vy~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~~~~~ 78 (277)
T cd06641 6 FTKLEKIGKGSFGEVFKGIDN--RTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYL-----KDTKLW 78 (277)
T ss_pred hhhheeEeecCCeEEEEEEEC--CCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEE-----eCCeEE
Confidence 667789999999999999843 356889999886433 233457889999999999999999999854 345789
Q ss_pred EEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcccc
Q 011508 240 LVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKF 319 (484)
Q Consensus 240 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~ 319 (484)
+||||+++++|.+++.. ..+++..+..++.|++.++.||| +.+++|+||+|+||+++.++.++|+|||++..
T Consensus 79 lv~e~~~~~~l~~~i~~-----~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~ 150 (277)
T cd06641 79 IIMEYLGGGSALDLLEP-----GPLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQ 150 (277)
T ss_pred EEEEeCCCCcHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHc---cCCeecCCCCHHhEEECCCCCEEEeeccccee
Confidence 99999999999999863 24889999999999999999999 89999999999999999999999999999876
Q ss_pred cccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchhh
Q 011508 320 LPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPERL 399 (484)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 399 (484)
..... .......++..|+|||.+.+..++.++|||||||++|+|++|..||...... ..... ....
T Consensus 151 ~~~~~-------~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~-----~~~~~-~~~~- 216 (277)
T cd06641 151 LTDTQ-------IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPM-----KVLFL-IPKN- 216 (277)
T ss_pred cccch-------hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchH-----HHHHH-HhcC-
Confidence 53221 1112235788999999998888899999999999999999999998653211 01110 0000
Q ss_pred hhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 400 AEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 400 ~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
..+.+ ...++.++.+++.+|++.+|++||++.++++.
T Consensus 217 ---~~~~~-----------------------~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 217 ---NPPTL-----------------------EGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred ---CCCCC-----------------------CcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 00000 11225568899999999999999999999985
No 306
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-37 Score=302.64 Aligned_cols=288 Identities=25% Similarity=0.290 Sum_probs=206.3
Q ss_pred CCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeec-cCCCcee
Q 011508 161 FSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVD-FQGNDFE 238 (484)
Q Consensus 161 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~~~~~~ 238 (484)
+...+.||+|+||.||+|+ ++.+|+.||||.++.... ...+...+|+++|++++|+|||++.+.-.... .--....
T Consensus 15 W~~~e~LG~Ga~g~V~rgr--nketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~ 92 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGR--NKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLP 92 (732)
T ss_pred eeehhhhcCCccceeeeec--ccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccc
Confidence 4456789999999999998 667899999999986442 34467889999999999999999988632111 0113456
Q ss_pred eEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeee--cC--CCceEEccc
Q 011508 239 ALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLL--DG--ELTAHVSDF 314 (484)
Q Consensus 239 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll--~~--~~~~kl~Df 314 (484)
.+|||||.+|||...+..-. ....+++.+.+.++.++..||.||| .++|+||||||.||++ .+ ....||+||
T Consensus 93 vlvmEyC~gGsL~~~L~~PE-N~~GLpE~e~l~lL~d~~~al~~Lr---En~IvHRDlKP~NIvl~~Gedgq~IyKLtDf 168 (732)
T KOG4250|consen 93 VLVMEYCSGGSLRKVLNSPE-NAYGLPESEFLDLLSDLVSALRHLR---ENGIVHRDLKPGNIVLQIGEDGQSIYKLTDF 168 (732)
T ss_pred eEEEeecCCCcHHHHhcCcc-cccCCCHHHHHHHHHHHHHHHHHHH---HcCceeccCCCCcEEEeecCCCceEEeeecc
Confidence 79999999999999997533 4557999999999999999999999 9999999999999998 23 336899999
Q ss_pred CcccccccccccCCCCccccccccccccccCccccC-CCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHh
Q 011508 315 GLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGM-GSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKE 393 (484)
Q Consensus 315 g~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 393 (484)
|.|+.+++. ......+||..|.+||... ...|+..+|.|||||++|+..||..||........ ..+....
T Consensus 169 G~Arel~d~--------s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~-~~~~~~~ 239 (732)
T KOG4250|consen 169 GAARELDDN--------SLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKN-NKEIMWH 239 (732)
T ss_pred cccccCCCC--------CeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccc-cchhhhh
Confidence 999987543 2445578999999999988 48899999999999999999999999976533321 1111111
Q ss_pred hc---chhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCC--CHHHHHHHHHHHHH
Q 011508 394 AL---PERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERM--NMEEVAAQLLSFRN 468 (484)
Q Consensus 394 ~~---~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP--t~~evl~~L~~i~~ 468 (484)
.. +..+.-..++......+....-..+.+. .......+-+.+..++..+|++|- ...+....+..|..
T Consensus 240 ~~tkkp~~v~i~~~~~eNgpv~~s~~lP~p~~L-------s~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~ 312 (732)
T KOG4250|consen 240 IITKKPSGVAIGAQEEENGPVEWSSTLPQPNHL-------SRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDILN 312 (732)
T ss_pred hhccCCCceeEeeecccCCceeeeccCCCcccc-------cHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHHh
Confidence 11 1111111111111111000000001111 112245566777888899999999 88888888877755
Q ss_pred HH
Q 011508 469 KL 470 (484)
Q Consensus 469 ~~ 470 (484)
..
T Consensus 313 ~~ 314 (732)
T KOG4250|consen 313 LK 314 (732)
T ss_pred hh
Confidence 43
No 307
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=1.3e-36 Score=292.05 Aligned_cols=211 Identities=23% Similarity=0.357 Sum_probs=168.2
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccC--
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQ-- 233 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~-- 233 (484)
-++|++.+.||+|+||.||+|.. ..++..||+|.+..... .....+.+|++++++++||||++++++|......
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~--~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARH--KKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYN 88 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEE--CCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEeccccccc
Confidence 35799999999999999999984 44678999998865432 2234567899999999999999999987654321
Q ss_pred -CCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEc
Q 011508 234 -GNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVS 312 (484)
Q Consensus 234 -~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~ 312 (484)
.....++||||+. ++|.+++... ...+++.+++.++.|++.||+||| +++++|+||||+||+++.++.+||+
T Consensus 89 ~~~~~~~lv~e~~~-~~l~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~ 161 (310)
T cd07865 89 RYKGSFYLVFEFCE-HDLAGLLSNK---NVKFTLSEIKKVMKMLLNGLYYIH---RNKILHRDMKAANILITKDGILKLA 161 (310)
T ss_pred CCCceEEEEEcCCC-cCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEECCCCcEEEC
Confidence 2345699999995 5888887632 235899999999999999999999 8899999999999999999999999
Q ss_pred ccCcccccccccccCCCCccccccccccccccCccccCCC-CCCcccceehhhHHHHHHHhCCCCCCCC
Q 011508 313 DFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGS-EVSTSGDVYSFGILLLEMFTGKGPTNEM 380 (484)
Q Consensus 313 Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dvws~Gvvl~elltg~~p~~~~ 380 (484)
|||.+.......... ........++..|+|||.+.+. .++.++||||||+++|||++|+.||...
T Consensus 162 dfg~~~~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~ 227 (310)
T cd07865 162 DFGLARAFSLSKNSK---PNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGN 227 (310)
T ss_pred cCCCcccccCCcccC---CCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCC
Confidence 999998664322111 1111234578899999987664 4788999999999999999999998653
No 308
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=6.1e-37 Score=286.40 Aligned_cols=248 Identities=25% Similarity=0.345 Sum_probs=196.3
Q ss_pred CCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc---cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCc
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR---GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
+|++.+.||.|+||.||+|.. ..++..||+|++..... ...+.+.+|++++++++||||+++++.+ .++.
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~--~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~ 73 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQK--RDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSF-----QDEE 73 (258)
T ss_pred CceEEEEeccCCCceEEEEEE--ccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhh-----cCCC
Confidence 478889999999999999984 34577899999975432 3356789999999999999999999884 4556
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCc
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGL 316 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 316 (484)
..++|+||+.+++|.+++... ..+++..+..++.|+++||.||| .++++|+||+|+||++++++.++|+|||.
T Consensus 74 ~~~lv~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~~i~~~l~~lh---~~~i~h~dl~~~nil~~~~~~~~l~d~~~ 146 (258)
T cd05578 74 NMYLVVDLLLGGDLRYHLSQK----VKFSEEQVKFWICEIVLALEYLH---SKGIIHRDIKPDNILLDEQGHVHITDFNI 146 (258)
T ss_pred eEEEEEeCCCCCCHHHHHHhc----CCcCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeEEcCCCCEEEeeccc
Confidence 899999999999999999743 35889999999999999999999 89999999999999999999999999999
Q ss_pred ccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcc
Q 011508 317 AKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALP 396 (484)
Q Consensus 317 a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 396 (484)
+....... ......++..|+|||.+....++.++|+||||+++|+|++|+.||...... .......
T Consensus 147 ~~~~~~~~--------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~---- 212 (258)
T cd05578 147 ATKVTPDT--------LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT--IRDQIRA---- 212 (258)
T ss_pred ccccCCCc--------cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc--HHHHHHH----
Confidence 87653321 112245788999999998888999999999999999999999999754221 1111111
Q ss_pred hhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCH--HHHH
Q 011508 397 ERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNM--EEVA 460 (484)
Q Consensus 397 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~--~evl 460 (484)
....... ..+...+..+.+++.+||+.||.+||++ +|++
T Consensus 213 -----~~~~~~~--------------------~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 213 -----KQETADV--------------------LYPATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred -----Hhccccc--------------------cCcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 0000000 0012225678899999999999999999 6654
No 309
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=1.5e-36 Score=292.26 Aligned_cols=281 Identities=21% Similarity=0.246 Sum_probs=190.9
Q ss_pred ccCccccccceeEEEEEEcCCCCeeEEEEEEeecc--CccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCceeeE
Q 011508 163 LENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQ--HRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFEAL 240 (484)
Q Consensus 163 ~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 240 (484)
+.+.+|.|+++.||++. . +++.||+|+++.. .....+.+.+|+++++.++|+||+++++++ ..++..++
T Consensus 6 i~~~~~~~~~v~~~~~~--~--~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~-----~~~~~~~~ 76 (314)
T cd08216 6 IGKCFEDLMIVHLAKHK--P--TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSF-----IVDSELYV 76 (314)
T ss_pred hhHhhcCCceEEEEEec--C--CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhhee-----ecCCeEEE
Confidence 34445555555555543 2 5788999998765 233446789999999999999999999985 34457899
Q ss_pred EeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccccc
Q 011508 241 VYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFL 320 (484)
Q Consensus 241 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~ 320 (484)
+|||+++++|.+++.... ...+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||.+..+
T Consensus 77 ~~e~~~~~~l~~~l~~~~--~~~~~~~~~~~~~~~l~~~L~~LH---~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~ 151 (314)
T cd08216 77 VSPLMAYGSCEDLLKTHF--PEGLPELAIAFILKDVLNALDYIH---SKGFIHRSVKASHILLSGDGKVVLSGLRYSVSM 151 (314)
T ss_pred EEeccCCCCHHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCcceEEEecCCceEEecCccceee
Confidence 999999999999997543 234889999999999999999999 899999999999999999999999999988765
Q ss_pred ccccccCCCCccccccccccccccCccccCC--CCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchh
Q 011508 321 PEAANNLSSNQSSSVGVKGTVGYAAPEYGMG--SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPER 398 (484)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 398 (484)
..................++..|+|||++.. ..++.++|||||||++|||++|+.||........ ..+......+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~-~~~~~~~~~~-- 228 (314)
T cd08216 152 IKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQM-LLEKVRGTVP-- 228 (314)
T ss_pred ccccccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhccCc--
Confidence 3322111111111223457788999998865 3588999999999999999999999975322111 1111111111
Q ss_pred hhhhcCcccccccccccc-----hhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 399 LAEIVDPVLLVEREEGET-----SEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 399 ~~~~~d~~l~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
..++............ .....................+.+++..||+.||++|||++|+++.
T Consensus 229 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 295 (314)
T cd08216 229 --CLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH 295 (314)
T ss_pred --cccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence 1111000000000000 0000000001111122335678899999999999999999999974
No 310
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=1.1e-36 Score=284.55 Aligned_cols=251 Identities=24% Similarity=0.328 Sum_probs=195.8
Q ss_pred CCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
+|++.+.||+|+||.||+|.... ++..+|+|.+..... ...+.+.+|+++++.++|+|++++++.+ ..+..
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~--~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~-----~~~~~ 73 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKS--DSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASF-----QENGR 73 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcC--CCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhhee-----ccCCe
Confidence 47788999999999999999543 467799999875421 2345788999999999999999999985 34458
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCC-ceEEcccCc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGEL-TAHVSDFGL 316 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~-~~kl~Dfg~ 316 (484)
.++|+||+++++|.+++.... ...+++..+..++.|++.||+||| +.+++|+||||+||++++++ .+||+|||.
T Consensus 74 ~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~H~dl~~~nil~~~~~~~~~l~d~~~ 148 (257)
T cd08225 74 LFIVMEYCDGGDLMKRINRQR--GVLFSEDQILSWFVQISLGLKHIH---DRKILHRDIKSQNIFLSKNGMVAKLGDFGI 148 (257)
T ss_pred EEEEEecCCCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEcCCCCeEEeccccc
Confidence 899999999999999997433 235789999999999999999999 89999999999999998885 569999999
Q ss_pred ccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcc
Q 011508 317 AKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALP 396 (484)
Q Consensus 317 a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 396 (484)
+....... .......|+..|+|||+..+..++.++||||||+++|||++|+.||.... ..+.+.....
T Consensus 149 ~~~~~~~~-------~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~ 216 (257)
T cd08225 149 ARQLNDSM-------ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNN-----LHQLVLKICQ 216 (257)
T ss_pred chhccCCc-------ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCcc-----HHHHHHHHhc
Confidence 87653221 11122358889999999888889999999999999999999999986421 1122211111
Q ss_pred hhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 397 ERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 397 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
.. ..+. .......+.+++.+|++.+|++|||+.|+++.
T Consensus 217 ~~----~~~~------------------------~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 217 GY----FAPI------------------------SPNFSRDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred cc----CCCC------------------------CCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 10 0000 01114568899999999999999999999753
No 311
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=9.6e-37 Score=295.17 Aligned_cols=292 Identities=20% Similarity=0.263 Sum_probs=194.4
Q ss_pred Cccccc--cceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCceeeE
Q 011508 165 NLIGAG--SFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFEAL 240 (484)
Q Consensus 165 ~~lg~G--~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 240 (484)
..||+| +||+||++. +..+++.||+|++..... ...+.+.+|+.+++.++||||+++++++. .++..++
T Consensus 4 ~~ig~g~~~~~~v~~a~--~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~-----~~~~~~~ 76 (328)
T cd08226 4 VEIGRGFCNLTSVYLAR--HTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFT-----TGSWLWV 76 (328)
T ss_pred HHhCCcccCceeEEEEE--EcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEe-----cCCceEE
Confidence 456766 999999998 445678999999875432 23467889999999999999999999954 3457899
Q ss_pred EeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccccc
Q 011508 241 VYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFL 320 (484)
Q Consensus 241 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~ 320 (484)
|+||+.+++|.+++.... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.++++||+.+...
T Consensus 77 v~e~~~~~~l~~~l~~~~--~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~ 151 (328)
T cd08226 77 ISPFMAYGSANSLLKTYF--PEGMSEALIGNILFGALRGLNYLH---QNGYIHRNIKASHILISGDGLVSLSGLSHLYSL 151 (328)
T ss_pred EEecccCCCHHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEeCCCcEEEechHHHhhh
Confidence 999999999999987543 235889999999999999999999 899999999999999999999999999865433
Q ss_pred ccccccCCCCccccccccccccccCccccCCC--CCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhh----
Q 011508 321 PEAANNLSSNQSSSVGVKGTVGYAAPEYGMGS--EVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEA---- 394 (484)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~--~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~---- 394 (484)
..................++..|+|||++.+. .++.++|||||||++|||++|+.||.................
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 231 (328)
T cd08226 152 VRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPL 231 (328)
T ss_pred hccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCc
Confidence 22110000000001112356679999998763 478999999999999999999999976432211111000000
Q ss_pred ----cchhhhhhcCcccccccc--cccch---hhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH--H
Q 011508 395 ----LPERLAEIVDPVLLVERE--EGETS---EANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ--L 463 (484)
Q Consensus 395 ----~~~~~~~~~d~~l~~~~~--~~~~~---~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~--L 463 (484)
.+.......+.....+.. +.... ................+...+.+++.+||+.||++|||+.|+++. +
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~ 311 (328)
T cd08226 232 DITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFF 311 (328)
T ss_pred cccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHH
Confidence 000000000000000000 00000 000000000111134457789999999999999999999999854 4
Q ss_pred HHHHH
Q 011508 464 LSFRN 468 (484)
Q Consensus 464 ~~i~~ 468 (484)
..+++
T Consensus 312 ~~~~~ 316 (328)
T cd08226 312 KQVKE 316 (328)
T ss_pred HHHHH
Confidence 44443
No 312
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=1.4e-36 Score=289.47 Aligned_cols=279 Identities=22% Similarity=0.253 Sum_probs=195.5
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCc
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
++|++.+.||+|+||.||+|... .+++.+|+|.++.... .....+.+|+.++.+++||||+++++++... +..
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~--~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~---~~~ 79 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDK--KTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGS---NLD 79 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEEC--CCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEec---CCC
Confidence 46888999999999999999954 3567899999875432 2234567899999999999999999986532 135
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCc
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGL 316 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 316 (484)
..++||||+. ++|.+++.... ..+++..++.++.|++.||+||| +.+++|+||||+||+++.++.+||+|||.
T Consensus 80 ~~~lv~e~~~-~~L~~~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH---~~~i~H~dl~p~nili~~~~~~~l~d~g~ 152 (293)
T cd07843 80 KIYMVMEYVE-HDLKSLMETMK---QPFLQSEVKCLMLQLLSGVAHLH---DNWILHRDLKTSNLLLNNRGILKICDFGL 152 (293)
T ss_pred cEEEEehhcC-cCHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCcEEEeecCc
Confidence 8899999996 59999887432 25899999999999999999999 89999999999999999999999999999
Q ss_pred ccccccccccCCCCccccccccccccccCccccCCC-CCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhc
Q 011508 317 AKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGS-EVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEAL 395 (484)
Q Consensus 317 a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 395 (484)
+....... .......++..|+|||.+.+. .++.++||||+|+++|+|++|+.||...... ...........
T Consensus 153 ~~~~~~~~-------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~-~~~~~~~~~~~ 224 (293)
T cd07843 153 AREYGSPL-------KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEI-DQLNKIFKLLG 224 (293)
T ss_pred eeeccCCc-------cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhC
Confidence 88664321 111223468889999987654 4689999999999999999999999753211 11111111000
Q ss_pred ---chhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 396 ---PERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 396 ---~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
+.......+ +...... ...... .......+........+.+++.+||+.+|++|||+.|+++
T Consensus 225 ~~~~~~~~~~~~--~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 225 TPTEKIWPGFSE--LPGAKKK-TFTKYP-YNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred CCchHHHHHhhc--cchhccc-cccccc-chhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 000000000 0000000 000000 0000000001112556889999999999999999999975
No 313
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-38 Score=326.30 Aligned_cols=256 Identities=28% Similarity=0.358 Sum_probs=199.7
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
+-++.-...||.|.||.||.|. +..+|...|+|-++.+.. ...+...+|+.++..++|||+|+++|+-.+.
T Consensus 1234 ~~rWqrg~~Ig~G~fG~VYtav--N~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHR----- 1306 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAV--NLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHR----- 1306 (1509)
T ss_pred eeeeccccccCCcceeeeEEee--cCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecH-----
Confidence 4466778899999999999999 555788899998875443 3346788999999999999999999985443
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
+..+|.||||++|+|.+.+...+ ..++.....+..|++.|++||| +++||||||||.||+|+.+|.+|++|||
T Consensus 1307 ekv~IFMEyC~~GsLa~ll~~gr----i~dE~vt~vyt~qll~gla~LH---~~gIVHRDIK~aNI~Ld~~g~iK~~DFG 1379 (1509)
T KOG4645|consen 1307 EKVYIFMEYCEGGSLASLLEHGR----IEDEMVTRVYTKQLLEGLAYLH---EHGIVHRDIKPANILLDFNGLIKYGDFG 1379 (1509)
T ss_pred HHHHHHHHHhccCcHHHHHHhcc----hhhhhHHHHHHHHHHHHHHHHH---hcCceecCCCccceeeecCCcEEeeccc
Confidence 47899999999999999997433 3566666778899999999999 9999999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCCCC---CCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHH
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSE---VSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVK 392 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~---~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 392 (484)
.|..+....... ...-....||+.|||||++.+.. -..+.||||+|||+.||+||+.||.....+-....+...
T Consensus 1380 sa~ki~~~~~~~---~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~ 1456 (1509)
T KOG4645|consen 1380 SAVKIKNNAQTM---PGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAA 1456 (1509)
T ss_pred ceeEecCchhcC---CHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhc
Confidence 998875442111 12234568999999999987643 466899999999999999999999765433222221111
Q ss_pred hhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 393 EALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 393 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
...|+- |+....+-.+++..|++.||++|.++.|+++.
T Consensus 1457 gh~Pq~--------------------------------P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1457 GHKPQI--------------------------------PERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred cCCCCC--------------------------------chhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 111110 22235556789999999999999999887653
No 314
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=7.3e-37 Score=296.78 Aligned_cols=280 Identities=21% Similarity=0.252 Sum_probs=200.0
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
.++|++.+.||+|++|.||+|.. ..++..||+|++..... .....+.+|+.++++++||||+++++++.... ...
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~--~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~ 80 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAID--TRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPG-ADF 80 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEE--cCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccC-CCC
Confidence 47899999999999999999984 44578899999875432 33466788999999999999999998764332 334
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
...++||||+ +++|.+++.. ...+++..++.++.|++.||+||| .++|+||||||+||++++++.+||+|||
T Consensus 81 ~~~~lv~e~~-~~~l~~~~~~----~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~dfg 152 (334)
T cd07855 81 KDVYVVMDLM-ESDLHHIIHS----DQPLTEEHIRYFLYQLLRGLKYIH---SANVIHRDLKPSNLLVNEDCELRIGDFG 152 (334)
T ss_pred ceEEEEEehh-hhhHHHHhcc----CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEecccc
Confidence 5789999999 4689998863 234899999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCC-CCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhh
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEA 394 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 394 (484)
++......... .........++..|+|||.+.+ ..++.++|||||||++|||++|+.||...... .....+...
T Consensus 153 ~~~~~~~~~~~---~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~--~~~~~~~~~ 227 (334)
T cd07855 153 MARGLSSSPTE---HKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYV--HQLKLILSV 227 (334)
T ss_pred cceeecccCcC---CCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChH--HHHHHHHHH
Confidence 98765332211 1111223468899999998765 46889999999999999999999999653211 111111111
Q ss_pred cc---hh-hhhhcCcccccccccccchhhhhhhcccccc----chhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 395 LP---ER-LAEIVDPVLLVEREEGETSEANAHKQRTRSF----GGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 395 ~~---~~-~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
.. .. +....+..+...... .+..... .....+..+.+++.+||+.+|++|||+.+++..
T Consensus 228 ~g~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 294 (334)
T cd07855 228 LGSPSEEVLNRIGSDRVRKYIQN---------LPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH 294 (334)
T ss_pred hCCChhHhhhhhchhhHHHHHhh---------cccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 10 00 111110000000000 0000000 011235678999999999999999999998874
No 315
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=1.4e-36 Score=287.92 Aligned_cols=272 Identities=23% Similarity=0.279 Sum_probs=193.2
Q ss_pred CCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCcee
Q 011508 161 FSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFE 238 (484)
Q Consensus 161 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 238 (484)
|++.+.||.|++|.||+|.... ++..||+|++..... .....+.+|+++++.++|+|++++++++. ++...
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~--~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~-----~~~~~ 73 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKL--TGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVH-----SENKL 73 (283)
T ss_pred CchheEecCCCCeEEEEEEEcC--CCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheec-----cCCeE
Confidence 5678899999999999998543 578899999875432 23356889999999999999999999853 34588
Q ss_pred eEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccc
Q 011508 239 ALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAK 318 (484)
Q Consensus 239 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~ 318 (484)
+++|||+ +++|.+++..... ..+++..++.++.|++.||+||| +++++||||+|+||+++.++.++|+|||.+.
T Consensus 74 ~iv~e~~-~~~l~~~~~~~~~--~~~~~~~~~~~~~~i~~~L~~lH---~~~~~H~dl~p~nil~~~~~~~~l~df~~~~ 147 (283)
T cd07835 74 YLVFEFL-DLDLKKYMDSSPL--TGLDPPLIKSYLYQLLQGIAYCH---SHRVLHRDLKPQNLLIDREGALKLADFGLAR 147 (283)
T ss_pred EEEEecc-CcCHHHHHhhCCC--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCcEEEeeccccc
Confidence 9999999 5799999874432 35899999999999999999999 8999999999999999999999999999987
Q ss_pred ccccccccCCCCccccccccccccccCccccCCC-CCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhc-c
Q 011508 319 FLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGS-EVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEAL-P 396 (484)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~-~ 396 (484)
...... .......++..|+|||++.+. .++.++||||||+++|+|++|+.||....... .+.+...... +
T Consensus 148 ~~~~~~-------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~ 219 (283)
T cd07835 148 AFGVPV-------RTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEID-QLFRIFRTLGTP 219 (283)
T ss_pred ccCCCc-------cccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCC
Confidence 553211 111122467889999987654 57889999999999999999999996532111 1111111100 0
Q ss_pred hh-hhhhc--CcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 397 ER-LAEIV--DPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 397 ~~-~~~~~--d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
.. ..... .+.......... ..............+.+++.+|++.||++|||++|+++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 220 DEDVWPGVTSLPDYKPTFPKWA--------RQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred ChHHhhhhhhchhhhhhccccc--------ccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 00 00000 000000000000 00000001112457889999999999999999999975
No 316
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=2.2e-36 Score=285.72 Aligned_cols=243 Identities=25% Similarity=0.293 Sum_probs=181.9
Q ss_pred ccccccceeEEEEEEcCCCCeeEEEEEEeeccCc---cchHHHHHHHHHHH---cCCCCCceeEeeeeeeeccCCCceee
Q 011508 166 LIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR---GASKSFIAECQALR---SIRHRNLVKIITSCVSVDFQGNDFEA 239 (484)
Q Consensus 166 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~---~l~h~niv~~~~~~~~~~~~~~~~~~ 239 (484)
.||+|+||.||++... .+++.+|+|.+..... .....+.+|..++. ..+|+|++.+++++. .++..+
T Consensus 1 ~lg~G~~g~Vy~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----~~~~~~ 73 (279)
T cd05633 1 IIGRGGFGEVYGCRKA--DTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFH-----TPDKLC 73 (279)
T ss_pred CcccCCCeEEEEEEEC--CCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEe-----cCCeEE
Confidence 4899999999999854 4578899998865432 11223444544333 347999999988853 344789
Q ss_pred EEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcccc
Q 011508 240 LVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKF 319 (484)
Q Consensus 240 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~ 319 (484)
+||||+++++|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||++++++.++|+|||++..
T Consensus 74 lv~e~~~~~~L~~~i~~~----~~l~~~~~~~i~~qi~~al~~lH---~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~ 146 (279)
T cd05633 74 FILDLMNGGDLHYHLSQH----GVFSEKEMRFYATEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACD 146 (279)
T ss_pred EEEecCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCcCCCCCCHHHEEECCCCCEEEccCCccee
Confidence 999999999999988643 35899999999999999999999 89999999999999999999999999999875
Q ss_pred cccccccCCCCccccccccccccccCccccC-CCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchh
Q 011508 320 LPEAANNLSSNQSSSVGVKGTVGYAAPEYGM-GSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPER 398 (484)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 398 (484)
..... .....|+..|+|||... +..++.++||||+||++|||++|+.||........ . ......
T Consensus 147 ~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~--~-~~~~~~--- 211 (279)
T cd05633 147 FSKKK---------PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK--H-EIDRMT--- 211 (279)
T ss_pred ccccC---------ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCH--H-HHHHHh---
Confidence 42211 11235899999999876 45688999999999999999999999975422111 0 010000
Q ss_pred hhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCC-----CHHHHHHH
Q 011508 399 LAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERM-----NMEEVAAQ 462 (484)
Q Consensus 399 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~ 462 (484)
...+..+ +..++.++.+++..||+.||++|| |++|+++.
T Consensus 212 --~~~~~~~-----------------------~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 212 --LTVNVEL-----------------------PDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred --hcCCcCC-----------------------ccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 0000000 122356788999999999999999 59998875
No 317
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=4e-36 Score=280.58 Aligned_cols=252 Identities=23% Similarity=0.324 Sum_probs=200.9
Q ss_pred CCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
+|++.+.||.|++|.||++... .++..+++|++..... ...+.+.+|+++++.++|+|++++++.+. ....
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~--~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~-----~~~~ 73 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRK--SDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFE-----EKGK 73 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEc--CCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEe-----cCCE
Confidence 4788899999999999999954 3567899999876543 34567889999999999999999998853 3458
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
.++|+||+++++|.+++.........+++..++.++.+++.||+||| +.+++|+||+|+||++++++.++|+|||.+
T Consensus 74 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh---~~~~~H~dl~~~nil~~~~~~~~l~d~~~~ 150 (258)
T cd08215 74 LCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLH---SRKILHRDIKPQNIFLTSNGLVKLGDFGIS 150 (258)
T ss_pred EEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHHeEEcCCCcEEECCccce
Confidence 89999999999999999865433467999999999999999999999 889999999999999999999999999998
Q ss_pred cccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcch
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPE 397 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 397 (484)
....... .......++..|+|||...+..++.++||||+|+++++|++|+.||.... ..+.....
T Consensus 151 ~~~~~~~-------~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~-----~~~~~~~~--- 215 (258)
T cd08215 151 KVLSSTV-------DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGEN-----LLELALKI--- 215 (258)
T ss_pred eecccCc-------ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCc-----HHHHHHHH---
Confidence 7653321 11122357889999999888889999999999999999999999986532 11111111
Q ss_pred hhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 398 RLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 398 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
....... .+..+...+.+++.+||..+|++|||+.|+++
T Consensus 216 -----~~~~~~~--------------------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 216 -----LKGQYPP--------------------IPSQYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred -----hcCCCCC--------------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 1000000 01122567889999999999999999999986
No 318
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=6.4e-37 Score=291.09 Aligned_cols=257 Identities=25% Similarity=0.293 Sum_probs=189.6
Q ss_pred CCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCC-CCCceeEeeeeeeeccCCCce
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR-GASKSFIAECQALRSIR-HRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~~~ 237 (484)
+|...+.||+|+||.||++... .++..+|+|.+..... .....+.+|+.++.++. |+||+++++++. .+..
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~-----~~~~ 77 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHK--PSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALF-----REGD 77 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEEC--CCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEe-----cCCc
Confidence 4556688999999999999844 4578899999875432 23457889999999996 999999999854 3447
Q ss_pred eeEEeecccCCCHHHHHhhc-CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCc
Q 011508 238 EALVYELMVNGSLEEWLHLN-RDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGL 316 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~-~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 316 (484)
.+++|||+. +++.++.... ......+++..+..++.|++.||+|||+ ..+++||||||+||+++.++.+||+|||+
T Consensus 78 ~~~~~e~~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~--~~~i~H~dlkp~Nil~~~~~~~kl~dfg~ 154 (288)
T cd06616 78 CWICMELMD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKE--ELKIIHRDVKPSNILLDRNGNIKLCDFGI 154 (288)
T ss_pred EEEEEeccc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh--cCCeeccCCCHHHEEEccCCcEEEeecch
Confidence 789999984 5665544321 1123468999999999999999999993 35999999999999999999999999999
Q ss_pred ccccccccccCCCCccccccccccccccCccccCCC---CCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHh
Q 011508 317 AKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGS---EVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKE 393 (484)
Q Consensus 317 a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~---~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 393 (484)
+....... ......++..|+|||.+.+. .++.++|||||||++|||++|+.||.... ........
T Consensus 155 ~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~----~~~~~~~~ 222 (288)
T cd06616 155 SGQLVDSI--------AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN----SVFDQLTQ 222 (288)
T ss_pred hHHhccCC--------ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc----hHHHHHhh
Confidence 87553211 11123478899999998766 68999999999999999999999986531 01011110
Q ss_pred hcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 394 ALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 394 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
.... ..+.+..+ ....++.++.+++.+||+.+|++|||++||++.
T Consensus 223 ~~~~-----~~~~~~~~-------------------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 223 VVKG-----DPPILSNS-------------------EEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred hcCC-----CCCcCCCc-------------------CCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000 00011000 011236678999999999999999999999874
No 319
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=1.7e-36 Score=294.58 Aligned_cols=287 Identities=23% Similarity=0.237 Sum_probs=203.0
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeecc--CccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQ--HRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
..+|.+.+.||+|+||+||+|+ +..++..||+|.+... .......+.+|+.+++.++|+||+++++++........
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~ 81 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAK--NSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAF 81 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEE--ecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheeccccccc
Confidence 4679999999999999999998 4456789999988643 22234567789999999999999999998654433333
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
...++|+||+ +++|.+++.. ...+++..+..++.|++.||.||| +++++||||||+||+++.++.+||+|||
T Consensus 82 ~~~~lv~e~~-~~~L~~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH---~~~i~H~dlkp~Nil~~~~~~~kL~Dfg 153 (337)
T cd07858 82 NDVYIVYELM-DTDLHQIIRS----SQTLSDDHCQYFLYQLLRGLKYIH---SANVLHRDLKPSNLLLNANCDLKICDFG 153 (337)
T ss_pred CcEEEEEeCC-CCCHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEECcCc
Confidence 4679999999 4789988863 235899999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCC-CCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhh
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEA 394 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 394 (484)
++....... .......++..|+|||.+.. ..++.++|||||||++|+|++|+.||...... .........
T Consensus 154 ~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~--~~~~~~~~~ 224 (337)
T cd07858 154 LARTTSEKG-------DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYV--HQLKLITEL 224 (337)
T ss_pred cccccCCCc-------ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChH--HHHHHHHHH
Confidence 998653321 11122357889999998764 46889999999999999999999999653110 001111110
Q ss_pred ----cchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH--HHHHHH
Q 011508 395 ----LPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ--LLSFRN 468 (484)
Q Consensus 395 ----~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~--L~~i~~ 468 (484)
.++....+.+............... .... .....++..+.+++.+||+.+|++|||++|+++. ++.++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~ 299 (337)
T cd07858 225 LGSPSEEDLGFIRNEKARRYIRSLPYTPR----QSFA-RLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHD 299 (337)
T ss_pred hCCCChHHhhhcCchhhhHHHHhcCcccc----cCHH-HHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcC
Confidence 0011111111110000000000000 0000 0012346778999999999999999999999977 655543
No 320
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=2.9e-36 Score=280.46 Aligned_cols=250 Identities=27% Similarity=0.384 Sum_probs=198.2
Q ss_pred CCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCceee
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFEA 239 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 239 (484)
.|+..+.||+|++|.||++.... ++..+++|++..........+.+|++++++++|+|++++++.+. .+...+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~--~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~ 73 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKR--TGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYL-----KKDELW 73 (253)
T ss_pred CceeeeeeccCCceEEEEEEECC--CCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEe-----cCCeEE
Confidence 37788999999999999999543 56789999997665445678999999999999999999999853 335789
Q ss_pred EEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcccc
Q 011508 240 LVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKF 319 (484)
Q Consensus 240 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~ 319 (484)
+++||+++++|.+++.... ..+++..+..++.|++.+|++|| ..+++||||+|+||++++++.++|+|||.+..
T Consensus 74 l~~e~~~~~~L~~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~ 147 (253)
T cd05122 74 IVMEFCSGGSLKDLLKSTN---QTLTESQIAYVCKELLKGLEYLH---SNGIIHRDIKAANILLTSDGEVKLIDFGLSAQ 147 (253)
T ss_pred EEEecCCCCcHHHHHhhcC---CCCCHHHHHHHHHHHHHHHHHhh---cCCEecCCCCHHHEEEccCCeEEEeecccccc
Confidence 9999999999999987432 46899999999999999999999 89999999999999999999999999999876
Q ss_pred cccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchhh
Q 011508 320 LPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPERL 399 (484)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 399 (484)
...... .....++..|+|||.+.+..++.++||||||+++|+|++|+.||...... ...........
T Consensus 148 ~~~~~~--------~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-----~~~~~~~~~~~ 214 (253)
T cd05122 148 LSDTKA--------RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPM-----KALFKIATNGP 214 (253)
T ss_pred cccccc--------ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchH-----HHHHHHHhcCC
Confidence 643211 22345788999999998888999999999999999999999998653111 00000000000
Q ss_pred hhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 400 AEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 400 ~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
....+ ...+...+.+++.+|++.||++|||+.|+++
T Consensus 215 ~~~~~--------------------------~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 215 PGLRN--------------------------PEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred CCcCc--------------------------ccccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 00000 1111456889999999999999999999975
No 321
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=3.3e-36 Score=285.62 Aligned_cols=274 Identities=21% Similarity=0.268 Sum_probs=196.4
Q ss_pred CCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCcee
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFE 238 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 238 (484)
+|++.+.||.|++|.||+|+. ..++..||+|.++.... .....+.+|++++++++|+|++++++++.. .+..
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~--~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~~~ 73 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRN--RTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHT-----ENKL 73 (284)
T ss_pred CceEeeeeccCCceEEEEEEE--CCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEee-----CCcE
Confidence 478889999999999999995 34578899999876543 234567889999999999999999998643 3478
Q ss_pred eEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccc
Q 011508 239 ALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAK 318 (484)
Q Consensus 239 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~ 318 (484)
++||||++ ++|.+++..... ...+++..+..++.|++.||+||| +.+++||||||+||++++++.++|+|||.+.
T Consensus 74 ~lv~e~~~-~~l~~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~ 148 (284)
T cd07836 74 MLVFEYMD-KDLKKYMDTHGV-RGALDPNTVKSFTYQLLKGIAFCH---ENRVLHRDLKPQNLLINKRGELKLADFGLAR 148 (284)
T ss_pred EEEEecCC-ccHHHHHHhcCC-CCCcCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEECCCCcEEEeecchhh
Confidence 99999997 589988875432 345899999999999999999999 8899999999999999999999999999987
Q ss_pred ccccccccCCCCccccccccccccccCccccCC-CCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhh---
Q 011508 319 FLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEA--- 394 (484)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~--- 394 (484)
...... .......++..|+|||.+.+ ..++.++|||||||++|+|++|+.||......+ .........
T Consensus 149 ~~~~~~-------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~ 220 (284)
T cd07836 149 AFGIPV-------NTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNED-QLLKIFRIMGTP 220 (284)
T ss_pred hhcCCc-------cccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHhCCC
Confidence 553221 11122346888999998765 457889999999999999999999997542211 111111100
Q ss_pred cchhhhhhcCc-ccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 395 LPERLAEIVDP-VLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 395 ~~~~~~~~~d~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
.......+.+. .+....... ...........++..+.+++.+|++.||.+||++.|+++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 221 TESTWPGISQLPEYKPTFPRY--------PPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred ChhhHHHHhcCchhcccccCC--------ChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00001111100 000000000 000000001223567889999999999999999999975
No 322
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=1.8e-36 Score=282.69 Aligned_cols=250 Identities=24% Similarity=0.287 Sum_probs=198.5
Q ss_pred CCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC--ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH--RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
+|++.+.||+|++|.||+++.. .++..+++|.+.... ......+.+|++++++++|+||+++++++. ....
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~--~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~ 73 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRL--SDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFL-----DGNK 73 (256)
T ss_pred CceEeeeecCCCceeEEEEEEC--CCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhc-----cCCE
Confidence 4788899999999999999843 456789999987543 223456788999999999999999998853 3468
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
.++|+||+++++|.+++.........+++..++.++.|++.||+||| +.+++|+||+|+||++++++.+||+|||++
T Consensus 74 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh---~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~ 150 (256)
T cd08530 74 LCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALH---EQKILHRDLKSANILLVANDLVKIGDLGIS 150 (256)
T ss_pred EEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCcceEEEecCCcEEEeeccch
Confidence 89999999999999999764444456899999999999999999999 899999999999999999999999999999
Q ss_pred cccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcch
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPE 397 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 397 (484)
....... .....++..|+|||.+.+..++.++|+||+|+++|+|++|+.||...... .+...+.
T Consensus 151 ~~~~~~~---------~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~--~~~~~~~----- 214 (256)
T cd08530 151 KVLKKNM---------AKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ--DLRYKVQ----- 214 (256)
T ss_pred hhhccCC---------cccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHh-----
Confidence 8764321 11234788999999999888999999999999999999999999653211 0110000
Q ss_pred hhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 398 RLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 398 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
...... .+..+..++.+++.+|++.+|++||++.|+++
T Consensus 215 ------~~~~~~--------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 215 ------RGKYPP--------------------IPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred ------cCCCCC--------------------CchhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 000000 01123567899999999999999999999975
No 323
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=6.5e-36 Score=280.43 Aligned_cols=254 Identities=23% Similarity=0.274 Sum_probs=194.3
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC-----ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH-----RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQ 233 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 233 (484)
.+|++.+.||+|+||.||+|+.. .++..||+|.+.... ......+.+|++++++++|+||+++++++...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~--- 76 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDA--DTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDP--- 76 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEc--CCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcC---
Confidence 47899999999999999999843 457889999875321 12335788999999999999999999986332
Q ss_pred CCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcc
Q 011508 234 GNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSD 313 (484)
Q Consensus 234 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~D 313 (484)
.....++|+||+++++|.+++... ..+++..+..++.|++.||.||| +.+++|+||||+||+++.++.++|+|
T Consensus 77 ~~~~~~~v~e~~~~~~L~~~~~~~----~~l~~~~~~~~~~~i~~al~~LH---~~~i~H~dl~p~ni~i~~~~~~~l~d 149 (264)
T cd06653 77 EEKKLSIFVEYMPGGSIKDQLKAY----GALTENVTRRYTRQILQGVSYLH---SNMIVHRDIKGANILRDSAGNVKLGD 149 (264)
T ss_pred CCCEEEEEEEeCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEECc
Confidence 234678999999999999998743 24788999999999999999999 89999999999999999999999999
Q ss_pred cCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHh
Q 011508 314 FGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKE 393 (484)
Q Consensus 314 fg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 393 (484)
||.++....... .........++..|+|||++.+..++.++|||||||++|+|++|+.||..... .... ..
T Consensus 150 fg~~~~~~~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----~~~~-~~ 220 (264)
T cd06653 150 FGASKRIQTICM----SGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEA----MAAI-FK 220 (264)
T ss_pred cccccccccccc----cCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCH----HHHH-HH
Confidence 999986532110 01111234588999999999888899999999999999999999999965311 1111 10
Q ss_pred hcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 394 ALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 394 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
...... .+.+ +.....++.+++.+|++ +|.+||++.+++.
T Consensus 221 ~~~~~~----~~~~-----------------------p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 221 IATQPT----KPML-----------------------PDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred HHcCCC----CCCC-----------------------CcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 000000 0000 12225678899999999 5799999998865
No 324
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=5.4e-36 Score=281.21 Aligned_cols=247 Identities=23% Similarity=0.277 Sum_probs=188.0
Q ss_pred HHhcCCCCccCcc--ccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcC-CCCCceeEeeeeeeec
Q 011508 155 FKATDGFSLENLI--GAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSI-RHRNLVKIITSCVSVD 231 (484)
Q Consensus 155 ~~~~~~~~~~~~l--g~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~ 231 (484)
....++|++.+.+ |+|+||.||+++ +..++..+|+|.+........ |+.....+ +|+|++++++++..
T Consensus 10 ~~~~~~~~~~~~~~lg~g~~g~v~~~~--~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~~-- 80 (267)
T PHA03390 10 VQFLKNCEIVKKLKLIDGKFGKVSVLK--HKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVTT-- 80 (267)
T ss_pred HHHHHhhccccceeecCCCceEEEEEE--EcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEec--
Confidence 3445677777776 999999999998 444578899999875432211 22222222 79999999998543
Q ss_pred cCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCC-ceE
Q 011508 232 FQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGEL-TAH 310 (484)
Q Consensus 232 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~-~~k 310 (484)
++..++||||+++++|.+++.... .+++.+++.++.|+++||+||| +.+++||||||+||+++.++ .++
T Consensus 81 ---~~~~~iv~e~~~~~~L~~~l~~~~----~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~~ 150 (267)
T PHA03390 81 ---LKGHVLIMDYIKDGDLFDLLKKEG----KLSEAEVKKIIRQLVEALNDLH---KHNIIHNDIKLENVLYDRAKDRIY 150 (267)
T ss_pred ---CCeeEEEEEcCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEeCCCCeEE
Confidence 448899999999999999997432 6899999999999999999999 89999999999999999998 999
Q ss_pred EcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHH
Q 011508 311 VSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNF 390 (484)
Q Consensus 311 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~ 390 (484)
|+|||.+...... ....++..|+|||++.+..++.++||||||+++|||++|+.||............+
T Consensus 151 l~dfg~~~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~ 219 (267)
T PHA03390 151 LCDYGLCKIIGTP-----------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESL 219 (267)
T ss_pred EecCccceecCCC-----------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHH
Confidence 9999998765321 12347889999999998889999999999999999999999997543332222222
Q ss_pred HHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCC-HHHHHH
Q 011508 391 VKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMN-MEEVAA 461 (484)
Q Consensus 391 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-~~evl~ 461 (484)
.... ...... ...++..+.+++.+||+.+|.+||+ ++|+++
T Consensus 220 ~~~~---------~~~~~~---------------------~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 220 LKRQ---------QKKLPF---------------------IKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred HHhh---------cccCCc---------------------ccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 2111 000000 1122567899999999999999996 588874
No 325
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=3e-36 Score=285.55 Aligned_cols=272 Identities=20% Similarity=0.224 Sum_probs=190.6
Q ss_pred CCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCC-CCCceeEeeeeeeeccCCCcee
Q 011508 161 FSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR-GASKSFIAECQALRSIR-HRNLVKIITSCVSVDFQGNDFE 238 (484)
Q Consensus 161 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~ 238 (484)
|++.+.||+|+||.||+|... .++..||+|+++.... .......+|+.++.++. |+|++++++++... ..+..
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~--~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~---~~~~~ 75 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSR--KTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDR---KTGRL 75 (282)
T ss_pred CceEeeccccccceEEEEEEc--CCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecC---CCCcE
Confidence 567889999999999999843 4568899999875432 22234557889999885 99999999986532 22578
Q ss_pred eEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccc
Q 011508 239 ALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAK 318 (484)
Q Consensus 239 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~ 318 (484)
++|+||++ ++|.+++.... ..+++.+++.++.|++.||+||| +.+++||||+|+||+++. +.+||+|||.+.
T Consensus 76 ~lv~e~~~-~~l~~~l~~~~---~~~~~~~~~~~~~qi~~~L~~LH---~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~ 147 (282)
T cd07831 76 ALVFELMD-MNLYELIKGRK---RPLPEKRVKSYMYQLLKSLDHMH---RNGIFHRDIKPENILIKD-DILKLADFGSCR 147 (282)
T ss_pred EEEEecCC-ccHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEcC-CCeEEEeccccc
Confidence 99999995 68888886432 35899999999999999999999 899999999999999999 999999999998
Q ss_pred ccccccccCCCCccccccccccccccCccccC-CCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcch
Q 011508 319 FLPEAANNLSSNQSSSVGVKGTVGYAAPEYGM-GSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPE 397 (484)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 397 (484)
...... ......++..|+|||.+. +..++.++|||||||++|||++|+.||..... .............
T Consensus 148 ~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~--~~~~~~~~~~~~~ 217 (282)
T cd07831 148 GIYSKP--------PYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNE--LDQIAKIHDVLGT 217 (282)
T ss_pred ccccCC--------CcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCH--HHHHHHHHHHcCC
Confidence 653221 111234788999999764 45578899999999999999999999965321 1111111111111
Q ss_pred ---hhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 398 ---RLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 398 ---~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
.+.......-...... ..... ..... ....++.++.+++.+||+.+|++|||++++++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~--~~~~~---~~~~~-~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 218 PDAEVLKKFRKSRHMNYNF--PSKKG---TGLRK-LLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred CCHHHHHhhcccccccccC--ccccc---ccHHH-HcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 0100000000000000 00000 00000 01133678999999999999999999999975
No 326
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-37 Score=271.19 Aligned_cols=258 Identities=24% Similarity=0.282 Sum_probs=200.6
Q ss_pred hcCCCCcc-CccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcC-CCCCceeEeeeeeeeccCC
Q 011508 157 ATDGFSLE-NLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSI-RHRNLVKIITSCVSVDFQG 234 (484)
Q Consensus 157 ~~~~~~~~-~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 234 (484)
.+++|++. ++||-|-.|.|-.+. ++.++..+|+|++.. .....+|+++--.. .|||||.+++++.. .+.+
T Consensus 59 itedY~is~qvLG~GinGkV~~C~--~k~T~ekfALKvL~D-----s~KARrEVeLHw~~s~h~~iV~IidVyeN-s~~~ 130 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCV--HKRTQEKFALKVLLD-----SPKARREVELHWMASGHPHIVSIIDVYEN-SYQG 130 (400)
T ss_pred chhhheehhhhhccccCCceEEEE--eccchhhhHHHHHhc-----CHHHHhHhhhhhhhcCCCceEEeehhhhh-hccC
Confidence 45667665 479999999999998 556788999999853 24567888876655 79999999998643 3566
Q ss_pred CceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecC---CCceEE
Q 011508 235 NDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDG---ELTAHV 311 (484)
Q Consensus 235 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~---~~~~kl 311 (484)
.....+|||.|+||.|.+.++...+ ..+++.++-.|..||..|+.||| +.+|.||||||+|+|.+. |-.+||
T Consensus 131 rkcLLiVmE~meGGeLfsriq~~g~--~afTErea~eI~~qI~~Av~~lH---~~nIAHRDlKpENLLyt~t~~na~lKL 205 (400)
T KOG0604|consen 131 RKCLLIVMECMEGGELFSRIQDRGD--QAFTEREASEIMKQIGLAVRYLH---SMNIAHRDLKPENLLYTTTSPNAPLKL 205 (400)
T ss_pred ceeeEeeeecccchHHHHHHHHccc--ccchHHHHHHHHHHHHHHHHHHH---hcchhhccCChhheeeecCCCCcceEe
Confidence 7788899999999999999986553 45999999999999999999999 999999999999999964 458999
Q ss_pred cccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHH
Q 011508 312 SDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFV 391 (484)
Q Consensus 312 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 391 (484)
+|||+|+.-... ......+-|+.|.|||++...+|+..+|+||+||++|-|++|.+||...... .
T Consensus 206 tDfGFAK~t~~~--------~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~--a----- 270 (400)
T KOG0604|consen 206 TDFGFAKETQEP--------GDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL--A----- 270 (400)
T ss_pred cccccccccCCC--------ccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCc--c-----
Confidence 999999865321 2223457899999999999999999999999999999999999999764221 1
Q ss_pred Hhhcchhhhh-hcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 392 KEALPERLAE-IVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 392 ~~~~~~~~~~-~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
++..... +....... + +..+...+....++++.+|..+|.+|.|+.|+++.
T Consensus 271 ---ispgMk~rI~~gqy~F--------------P---~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~h 322 (400)
T KOG0604|consen 271 ---ISPGMKRRIRTGQYEF--------------P---EPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDH 322 (400)
T ss_pred ---CChhHHhHhhccCccC--------------C---ChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcC
Confidence 1111111 11111000 1 11144556778899999999999999999999853
No 327
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.6e-37 Score=312.12 Aligned_cols=278 Identities=19% Similarity=0.202 Sum_probs=186.3
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEE------------------EeeccCccchHHHHHHHHHHHcCCCCC
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVK------------------VLNLQHRGASKSFIAECQALRSIRHRN 219 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK------------------~~~~~~~~~~~~~~~e~~~l~~l~h~n 219 (484)
.++|++.+.||+|+||+||++.++... +...++| .+.. .......+.+|+.++++++|+|
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~k~~~~-~~~~~~~~~~Ei~il~~l~Hpn 224 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALRAST-EEAEARRGVNSTNQGKPKCERLIAKRVKA-GSRAAIQLENEILALGRLNHEN 224 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEeccc-hhhhhhhccccccccchhhhhhHhHHhhc-chHHHHHHHHHHHHHHhCCCCC
Confidence 468999999999999999998754321 1111211 1111 1122356789999999999999
Q ss_pred ceeEeeeeeeeccCCCceeeEEeecccCCCHHHHHhhcCCC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCC
Q 011508 220 LVKIITSCVSVDFQGNDFEALVYELMVNGSLEEWLHLNRDA-PRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKP 298 (484)
Q Consensus 220 iv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~ 298 (484)
|+++++++. ..+..++|+|++ +++|.+++...... ........+..++.|++.||+||| +++|+||||||
T Consensus 225 Iv~l~~~~~-----~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH---~~gIiHrDLKP 295 (501)
T PHA03210 225 ILKIEEILR-----SEANTYMITQKY-DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIH---DKKLIHRDIKL 295 (501)
T ss_pred cCcEeEEEE-----ECCeeEEEEecc-ccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHH---hCCeecCCCCH
Confidence 999999854 344789999998 56788877533211 122345677889999999999999 89999999999
Q ss_pred CCeeecCCCceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCC-C
Q 011508 299 SNVLLDGELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGP-T 377 (484)
Q Consensus 299 ~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p-~ 377 (484)
+|||++.++.+||+|||+++.+.... ........||..|+|||++.+..++.++|||||||++|||++|..+ +
T Consensus 296 ~NILl~~~~~vkL~DFGla~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~ 369 (501)
T PHA03210 296 ENIFLNCDGKIVLGDFGTAMPFEKER------EAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPI 369 (501)
T ss_pred HHEEECCCCCEEEEeCCCceecCccc------ccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCc
Confidence 99999999999999999998764321 1112235689999999999999999999999999999999998754 4
Q ss_pred CCCccC-CccHhHHHHh------hcchh---hhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCC
Q 011508 378 NEMFTG-NLTLHNFVKE------ALPER---LAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSS 447 (484)
Q Consensus 378 ~~~~~~-~~~~~~~~~~------~~~~~---~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~ 447 (484)
...... ...+.+.+.. .+++. +.+.++..... .... .. ....+ .......+.+++.+||+
T Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~---~~~~-~~---~~~~~---~~~~~~~~~~li~kmL~ 439 (501)
T PHA03210 370 GDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEID---HAGH-SV---PPLIR---NLGLPADFEYPLVKMLT 439 (501)
T ss_pred cCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcc---cCcc-ch---hhHHH---hcCCChHHHHHHHHHhc
Confidence 332111 1111111111 01110 11111100000 0000 00 00000 01123457788999999
Q ss_pred CCcCCCCCHHHHHHH
Q 011508 448 ELPRERMNMEEVAAQ 462 (484)
Q Consensus 448 ~dP~~RPt~~evl~~ 462 (484)
.||++|||+.|+++.
T Consensus 440 ~DP~~Rpsa~elL~h 454 (501)
T PHA03210 440 FDWHLRPGAAELLAL 454 (501)
T ss_pred cCcccCcCHHHHhhC
Confidence 999999999999864
No 328
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=1.4e-37 Score=274.77 Aligned_cols=210 Identities=24% Similarity=0.366 Sum_probs=174.5
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCee--EEEEEEeeccC--ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHET--LVAVKVLNLQH--RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQG 234 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~--~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 234 (484)
..|+....||+|.||.||+|+-.+....+ .+|+|.++... .+......+|+.+++.++|||++.+..++. ..
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl----~~ 99 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFL----SH 99 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHh----cc
Confidence 56889999999999999999766555533 89999997553 355678899999999999999999998874 33
Q ss_pred CceeeEEeecccCCCHHHHHhhcCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCC----Cce
Q 011508 235 NDFEALVYELMVNGSLEEWLHLNRD-APRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGE----LTA 309 (484)
Q Consensus 235 ~~~~~lv~e~~~~gsL~~~l~~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~----~~~ 309 (484)
+...++++||.+ -+|.+.++-.+. ..+.++...+.+|+.||+.|+.||| ++=|+||||||.||++..+ |.+
T Consensus 100 d~~v~l~fdYAE-hDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH---~NWvlHRDLKPaNIlvmgdgperG~V 175 (438)
T KOG0666|consen 100 DKKVWLLFDYAE-HDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLH---SNWVLHRDLKPANILVMGDGPERGRV 175 (438)
T ss_pred CceEEEEehhhh-hhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHh---hhheeeccCCcceEEEeccCCccCee
Confidence 568899999995 589998875443 2346888999999999999999999 8999999999999999887 899
Q ss_pred EEcccCcccccccccccCCCCccccccccccccccCccccCC-CCCCcccceehhhHHHHHHHhCCCCCCCC
Q 011508 310 HVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-SEVSTSGDVYSFGILLLEMFTGKGPTNEM 380 (484)
Q Consensus 310 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~ 380 (484)
||+|||+++.+...-. ........+-|..|+|||.+.+ ..||.+.|||++||++.||+|-++.|.+.
T Consensus 176 KIaDlGlaR~~~~plk----pl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~ 243 (438)
T KOG0666|consen 176 KIADLGLARLFNNPLK----PLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGR 243 (438)
T ss_pred EeecccHHHHhhcccc----ccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccch
Confidence 9999999998754321 1222334678999999998877 46999999999999999999999888764
No 329
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=4.3e-36 Score=280.47 Aligned_cols=254 Identities=27% Similarity=0.339 Sum_probs=199.6
Q ss_pred CCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
+|...+.||+|++|.||+|... .+++.|++|++..... ...+.+.+|+.++++++|+||+++++.+.... ...
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~--~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~---~~~ 75 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDK--DTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEE---KNT 75 (260)
T ss_pred CceeeeEeeecCceEEEEEEEC--CCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCC---CCe
Confidence 4777899999999999999854 3578899999876543 34567899999999999999999999864321 257
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
.++|+||+++++|.+++.... .+++..++.++.|++.||+||| +.+++|+||+|+||+++.++.++|+|||.+
T Consensus 76 ~~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~l~~~l~~lh---~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~ 148 (260)
T cd06606 76 LNIFLEYVSGGSLSSLLKKFG----KLPEPVIRKYTRQILEGLAYLH---SNGIVHRDIKGANILVDSDGVVKLADFGCA 148 (260)
T ss_pred EEEEEEecCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEcCCCCEEEcccccE
Confidence 899999999999999997433 6899999999999999999999 899999999999999999999999999998
Q ss_pred cccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcch
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPE 397 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 397 (484)
......... .......++..|+|||.......+.++||||||+++++|++|+.||..... .....
T Consensus 149 ~~~~~~~~~-----~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~----~~~~~------ 213 (260)
T cd06606 149 KRLGDIETG-----EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGN----PMAAL------ 213 (260)
T ss_pred Eeccccccc-----ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc----hHHHH------
Confidence 876443210 012234588899999999888899999999999999999999999976431 00000
Q ss_pred hhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 398 RLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 398 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
..+....... ..+...+..+.+++.+|++.+|++||++.|++.
T Consensus 214 --~~~~~~~~~~-------------------~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 214 --YKIGSSGEPP-------------------EIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred --HhccccCCCc-------------------CCCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 0010000000 001222567899999999999999999999975
No 330
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=1.7e-36 Score=294.59 Aligned_cols=275 Identities=24% Similarity=0.327 Sum_probs=197.4
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC--ccchHHHHHHHHHHHcC-CCCCceeEeeeeeeeccCC
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH--RGASKSFIAECQALRSI-RHRNLVKIITSCVSVDFQG 234 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 234 (484)
.++|++.+.||+|+||.||+|... .++..+|+|++.... ......+.+|+.+++++ +|+||+++++++.. .+
T Consensus 6 ~~~y~~~~~lg~g~~~~v~~~~~~--~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~---~~ 80 (337)
T cd07852 6 LRKYEILQKLGKGAYGIVWKAIDR--RTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKA---EN 80 (337)
T ss_pred hhHHHHhHhhcCCCCeeEEEEEEc--CCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeecc---CC
Confidence 467889999999999999999854 356889999885422 22335677899999999 99999999998642 23
Q ss_pred CceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEccc
Q 011508 235 NDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDF 314 (484)
Q Consensus 235 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 314 (484)
....++||||++ ++|.+++... .+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+||
T Consensus 81 ~~~~~lv~e~~~-~~L~~~~~~~-----~~~~~~~~~i~~qi~~~L~~LH---~~~i~H~dl~p~nill~~~~~~kl~d~ 151 (337)
T cd07852 81 DKDIYLVFEYME-TDLHAVIRAN-----ILEDVHKRYIMYQLLKALKYIH---SGNVIHRDLKPSNILLNSDCRVKLADF 151 (337)
T ss_pred CceEEEEecccc-cCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEEeec
Confidence 446799999996 6999988632 5788999999999999999999 899999999999999999999999999
Q ss_pred CcccccccccccCCCCccccccccccccccCccccCC-CCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHh
Q 011508 315 GLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKE 393 (484)
Q Consensus 315 g~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 393 (484)
|.+.......... .........++..|+|||.+.+ ..++.++||||||+++|+|++|+.||....... ........
T Consensus 152 g~~~~~~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~-~~~~~~~~ 228 (337)
T cd07852 152 GLARSLSELEENP--ENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLN-QLEKIIEV 228 (337)
T ss_pred cchhccccccccc--cCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHH
Confidence 9998764332111 1112233468899999998754 567889999999999999999999996532211 11111100
Q ss_pred h--cchh---------hhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 394 A--LPER---------LAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 394 ~--~~~~---------~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
. .+.. ...+++..... .. ...... ...++.++.+++..||+.||++|||+.++++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~--------~~~~~~-~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 229 IGPPSAEDIESIKSPFAATMLDSLPSR----PR--------KPLDEL-LPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred hCCCCHHHHHHHHhhhHHHhhhhcccc----cc--------cchhhh-ccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 0 0000 00011100000 00 000000 11136778999999999999999999999975
No 331
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=9.1e-37 Score=270.42 Aligned_cols=272 Identities=20% Similarity=0.301 Sum_probs=205.7
Q ss_pred HHhHHHhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcC-CCCCceeEeeeeee
Q 011508 151 YQNLFKATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSI-RHRNLVKIITSCVS 229 (484)
Q Consensus 151 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~ 229 (484)
++++.+-|+ +.||+|+|+.|..++ +-.++..+|||++.++......+..+|++++.+. .|+||++++++
T Consensus 75 F~d~YkLt~-----e~LGeGAyasVqtcv--~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLief--- 144 (463)
T KOG0607|consen 75 FEDMYKLTS-----ELLGEGAYASVQTCV--SIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEF--- 144 (463)
T ss_pred HHHHHHhHH-----HHhcCccceeeeeee--eeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHH---
Confidence 555555554 689999999999887 4456788999999988666677899999999999 69999999999
Q ss_pred eccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCC--
Q 011508 230 VDFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGEL-- 307 (484)
Q Consensus 230 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~-- 307 (484)
|+++...|+|||.|.||+|.+++++. ..+++.++-++.++|+.||.||| .++|.||||||+|||-....
T Consensus 145 --FEdd~~FYLVfEKm~GGplLshI~~~----~~F~E~EAs~vvkdia~aLdFlH---~kgIAHRDlKPENiLC~~pn~v 215 (463)
T KOG0607|consen 145 --FEDDTRFYLVFEKMRGGPLLSHIQKR----KHFNEREASRVVKDIASALDFLH---TKGIAHRDLKPENILCESPNKV 215 (463)
T ss_pred --hcccceEEEEEecccCchHHHHHHHh----hhccHHHHHHHHHHHHHHHHHHh---hcCcccccCCccceeecCCCCc
Confidence 67777999999999999999999854 35899999999999999999999 99999999999999996543
Q ss_pred -ceEEcccCcccccccccccCCCCccccccccccccccCccccC-----CCCCCcccceehhhHHHHHHHhCCCCCCCCc
Q 011508 308 -TAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGM-----GSEVSTSGDVYSFGILLLEMFTGKGPTNEMF 381 (484)
Q Consensus 308 -~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~ 381 (484)
.+||+||.+..-......-.....+.....+|+..|||||+.. ...|+.++|.||+|||+|-|++|.+||.+.-
T Consensus 216 sPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~C 295 (463)
T KOG0607|consen 216 SPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHC 295 (463)
T ss_pred CceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCcc
Confidence 7899999987655333222222233345678999999999643 2458899999999999999999999998764
Q ss_pred cCCccHhHHHHhhcch----h-hhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCH
Q 011508 382 TGNLTLHNFVKEALPE----R-LAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNM 456 (484)
Q Consensus 382 ~~~~~~~~~~~~~~~~----~-~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~ 456 (484)
..+-.+ -+...-. . ...+.+-.... ....+...+.+..+++...+..||.+|-++
T Consensus 296 g~dCGW---drGe~Cr~CQ~~LFesIQEGkYeF-----------------PdkdWahIS~eakdlisnLlvrda~~rlsa 355 (463)
T KOG0607|consen 296 GADCGW---DRGEVCRVCQNKLFESIQEGKYEF-----------------PDKDWAHISSEAKDLISNLLVRDAKQRLSA 355 (463)
T ss_pred CCcCCc---cCCCccHHHHHHHHHHHhccCCcC-----------------ChhhhHHhhHHHHHHHHHHHhccHHhhhhh
Confidence 432211 1111100 0 11111111110 001133446677888888999999999999
Q ss_pred HHHHH
Q 011508 457 EEVAA 461 (484)
Q Consensus 457 ~evl~ 461 (484)
.+++.
T Consensus 356 ~~vln 360 (463)
T KOG0607|consen 356 AQVLN 360 (463)
T ss_pred hhccC
Confidence 99886
No 332
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=5e-36 Score=287.85 Aligned_cols=278 Identities=24% Similarity=0.245 Sum_probs=195.3
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCcc--chHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRG--ASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
.++|++.+.||+|+||.||+|... .++..||+|.++..... ....+.+|+.++++++|+|++++++++... ..
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~ 80 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDT--TSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGK---HL 80 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEEC--CCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecC---CC
Confidence 467999999999999999999954 45788999998754322 234567899999999999999999986432 22
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
+..++||||+. ++|.+++.... ..+++.+++.++.|++.||+||| +.+++||||||+||++++++.+||+|||
T Consensus 81 ~~~~lv~e~~~-~~l~~~l~~~~---~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~kL~dfg 153 (309)
T cd07845 81 DSIFLVMEYCE-QDLASLLDNMP---TPFSESQVKCLMLQLLRGLQYLH---ENFIIHRDLKVSNLLLTDKGCLKIADFG 153 (309)
T ss_pred CeEEEEEecCC-CCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECccc
Confidence 46799999995 58988887432 45899999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCC-CCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhh
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEA 394 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 394 (484)
.+....... .......++..|+|||.+.+ ..++.++||||+||++|||++|+.||...... .....+...
T Consensus 154 ~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~--~~~~~~~~~ 224 (309)
T cd07845 154 LARTYGLPA-------KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEI--EQLDLIIQL 224 (309)
T ss_pred eeeecCCcc-------CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHh
Confidence 998663321 11112235778999998765 55789999999999999999999999753211 111111111
Q ss_pred cchhhhh----hcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 395 LPERLAE----IVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 395 ~~~~~~~----~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
....... ..+............ ........ .......+.+++.+|++.||++|||++|+++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-----~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h 290 (309)
T cd07845 225 LGTPNESIWPGFSDLPLVGKFTLPKQ-PYNNLKHK-----FPWLSEAGLRLLNFLLMYDPKKRATAEEALES 290 (309)
T ss_pred cCCCChhhchhhhcccccccccccCC-CCCchHHh-----ccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 1000000 000000000000000 00000000 01124567899999999999999999999864
No 333
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=9.5e-36 Score=286.80 Aligned_cols=246 Identities=25% Similarity=0.336 Sum_probs=190.4
Q ss_pred CCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc---cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 161 FSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR---GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 161 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
|...+.||+|+||.||+|+.. .++..+|+|.+..... .....+.+|++++++++|+|++++++++.. +..
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~--~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-----~~~ 99 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDV--RTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLR-----EHT 99 (317)
T ss_pred hhhhheeccCCCeEEEEEEEc--CCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-----CCe
Confidence 667789999999999999854 3568899999874432 223568899999999999999999998643 347
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
.++||||+. |+|.+.+... ...+++.++..++.|++.|+.||| +.+++||||+|+||+++.++.++|+|||++
T Consensus 100 ~~lv~e~~~-g~l~~~~~~~---~~~l~~~~~~~i~~~i~~~l~~lH---~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~ 172 (317)
T cd06635 100 AWLVMEYCL-GSASDLLEVH---KKPLQEVEIAAITHGALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSA 172 (317)
T ss_pred EEEEEeCCC-CCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcccEEECCCCCEEEecCCCc
Confidence 899999996 5888877532 235899999999999999999999 899999999999999999999999999988
Q ss_pred cccccccccCCCCccccccccccccccCccccC---CCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhh
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGM---GSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEA 394 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 394 (484)
...... ....++..|+|||++. ...++.++|||||||++|||++|+.||...... ..+..+..
T Consensus 173 ~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~-~~~~~~~~-- 238 (317)
T cd06635 173 SIASPA-----------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-SALYHIAQ-- 238 (317)
T ss_pred cccCCc-----------ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHH-HHHHHHHh--
Confidence 754221 1235788999999873 456889999999999999999999998653111 00111100
Q ss_pred cchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHH
Q 011508 395 LPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQL 463 (484)
Q Consensus 395 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 463 (484)
..... .....+...+.+++.+|++.+|++||++.+|++.+
T Consensus 239 ----------~~~~~-------------------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~ 278 (317)
T cd06635 239 ----------NESPT-------------------LQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHM 278 (317)
T ss_pred ----------ccCCC-------------------CCCccccHHHHHHHHHHccCCcccCcCHHHHHhCh
Confidence 00000 00112255788999999999999999999999864
No 334
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=5e-36 Score=283.27 Aligned_cols=245 Identities=26% Similarity=0.322 Sum_probs=187.7
Q ss_pred cccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCceeeEEee
Q 011508 167 IGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFEALVYE 243 (484)
Q Consensus 167 lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 243 (484)
||+|+||+||++... .+++.||+|.+.... ......+.+|++++++++|||++++++.+ ...+..++|||
T Consensus 1 lg~g~~g~vy~~~~~--~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~lv~e 73 (277)
T cd05577 1 LGKGGFGEVCACQVK--ATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAF-----ETKDDLCLVMT 73 (277)
T ss_pred CCCCCceeEEEEEEc--CCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEE-----ecCCeEEEEEe
Confidence 699999999999844 357889999986432 22234567899999999999999999884 34458899999
Q ss_pred cccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcccccccc
Q 011508 244 LMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFLPEA 323 (484)
Q Consensus 244 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~~~~ 323 (484)
|+++++|.+++..... ..+++..++.++.|++.||.||| +.+++||||+|+||++++++.++|+|||.+......
T Consensus 74 ~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~ql~~~l~~lH---~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~ 148 (277)
T cd05577 74 LMNGGDLKYHIYNVGE--PGFPEARAIFYAAQIICGLEHLH---QRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG 148 (277)
T ss_pred cCCCCcHHHHHHHcCc--CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEccCcchhhhccC
Confidence 9999999999975432 35899999999999999999999 899999999999999999999999999998765321
Q ss_pred cccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchhhhhhc
Q 011508 324 ANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPERLAEIV 403 (484)
Q Consensus 324 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (484)
. ......++..|+|||.+.+..++.++|||||||++|+|++|+.||....... ........ ..
T Consensus 149 ~--------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~--------~~ 211 (277)
T cd05577 149 K--------KIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKV-EKEELKRR--------TL 211 (277)
T ss_pred C--------ccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccc-cHHHHHhc--------cc
Confidence 1 1122347789999999888889999999999999999999999996532210 00100000 00
Q ss_pred CcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCC-----CHHHHHH
Q 011508 404 DPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERM-----NMEEVAA 461 (484)
Q Consensus 404 d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~ 461 (484)
.... ..+......+.+++.+||+.||++|| ++.++++
T Consensus 212 ~~~~---------------------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 212 EMAV---------------------EYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred cccc---------------------cCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence 0000 00112255788999999999999999 6666654
No 335
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=3.5e-36 Score=286.15 Aligned_cols=245 Identities=25% Similarity=0.347 Sum_probs=191.6
Q ss_pred CccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCceeeEEeec
Q 011508 165 NLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFEALVYEL 244 (484)
Q Consensus 165 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~ 244 (484)
..||+|+||.||++... .++..||+|.+..........+.+|+.+++.++|+|++++++++. .++..++||||
T Consensus 26 ~~lg~g~~g~v~~~~~~--~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~~~~~lv~e~ 98 (292)
T cd06657 26 IKIGEGSTGIVCIATVK--SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL-----VGDELWVVMEF 98 (292)
T ss_pred HHcCCCCCeEEEEEEEc--CCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEE-----eCCEEEEEEec
Confidence 57999999999999854 357889999886554445567889999999999999999999854 34588999999
Q ss_pred ccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccccccccc
Q 011508 245 MVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFLPEAA 324 (484)
Q Consensus 245 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~~~~~ 324 (484)
+++++|.+++.. ..+++..+..++.|++.||+||| +.+++||||+|+||+++.++.++|+|||.+.......
T Consensus 99 ~~~~~L~~~~~~-----~~~~~~~~~~~~~ql~~~l~~lH---~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~ 170 (292)
T cd06657 99 LEGGALTDIVTH-----TRMNEEQIAAVCLAVLKALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV 170 (292)
T ss_pred CCCCcHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEcccccceeccccc
Confidence 999999998752 24789999999999999999999 8999999999999999999999999999887553221
Q ss_pred ccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchhhhhhcC
Q 011508 325 NNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPERLAEIVD 404 (484)
Q Consensus 325 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 404 (484)
.......++..|+|||...+..++.++||||+|+++|+|++|+.||..... ...........+
T Consensus 171 -------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~--~~~~~~~~~~~~-------- 233 (292)
T cd06657 171 -------PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--LKAMKMIRDNLP-------- 233 (292)
T ss_pred -------ccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHhhCC--------
Confidence 111224578899999998888889999999999999999999999864211 111111111111
Q ss_pred cccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 405 PVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 405 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
..+.. ...+...+.+++.+||+.+|.+||++.++++.
T Consensus 234 ~~~~~---------------------~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~ 270 (292)
T cd06657 234 PKLKN---------------------LHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 270 (292)
T ss_pred cccCC---------------------cccCCHHHHHHHHHHHhCCcccCcCHHHHhcC
Confidence 00000 01124567889999999999999999999873
No 336
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.2e-36 Score=292.77 Aligned_cols=251 Identities=23% Similarity=0.305 Sum_probs=201.2
Q ss_pred HhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccc--hHHHHHHHHHHHcCCCCCceeEeeeeeeeccC
Q 011508 156 KATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGA--SKSFIAECQALRSIRHRNLVKIITSCVSVDFQ 233 (484)
Q Consensus 156 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 233 (484)
.....|.+...||+|.|+.|..|+ +..++..||||.+++..-.. ...+.+|+++|+.++|||||+++.+. .
T Consensus 53 ~~vg~y~i~~tig~g~f~~V~La~--~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~-----~ 125 (596)
T KOG0586|consen 53 NSVGLYVIIKTIGKGNFAKVKLAR--HILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVI-----E 125 (596)
T ss_pred ccccceeeeeeeccceeEEEEeeE--ecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeee-----e
Confidence 345778999999999999999999 44567889999998654332 24588999999999999999999984 4
Q ss_pred CCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcc
Q 011508 234 GNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSD 313 (484)
Q Consensus 234 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~D 313 (484)
.....++||||+.+|.+.+++..+. .+.+..+..++.|+..|++|+| ++.|||||||++||||+.+.++||+|
T Consensus 126 t~~~lylV~eya~~ge~~~yl~~~g----r~~e~~ar~~F~q~vsaveYcH---~k~ivHrdLk~eNilL~~~mnikIaD 198 (596)
T KOG0586|consen 126 TEATLYLVMEYASGGELFDYLVKHG----RMKEKEARAKFRQIVSAVEYCH---SKNIVHRDLKAENILLDENMNIKIAD 198 (596)
T ss_pred ecceeEEEEEeccCchhHHHHHhcc----cchhhhhhhhhHHHHHHHHHHh---hcceeccccchhhcccccccceeeec
Confidence 4558999999999999999998554 3556888889999999999999 99999999999999999999999999
Q ss_pred cCcccccccccccCCCCccccccccccccccCccccCCCCC-CcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHH
Q 011508 314 FGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEV-STSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVK 392 (484)
Q Consensus 314 fg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 392 (484)
||++.++... ......+|++.|.|||+..+..| ++++|+||+|+++|-|+.|..||++..-..
T Consensus 199 fgfS~~~~~~--------~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~-------- 262 (596)
T KOG0586|consen 199 FGFSTFFDYG--------LMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKE-------- 262 (596)
T ss_pred cccceeeccc--------ccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccccc--------
Confidence 9999987532 23345689999999999998766 689999999999999999999998642111
Q ss_pred hhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 393 EALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 393 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
.-++.+...+ +. +.-...+..+++++++-.+|.+|++++++.+.
T Consensus 263 ---------Lr~rvl~gk~-------------rI----p~~ms~dce~lLrk~lvl~Pskr~~~dqim~~ 306 (596)
T KOG0586|consen 263 ---------LRPRVLRGKY-------------RI----PFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKD 306 (596)
T ss_pred ---------ccchheeeee-------------cc----cceeechhHHHHHHhhccCccccCCHHHhhhh
Confidence 1111111100 00 00013345788899999999999999999864
No 337
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=1.3e-35 Score=281.98 Aligned_cols=277 Identities=22% Similarity=0.248 Sum_probs=195.3
Q ss_pred CCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcC---CCCCceeEeeeeeeeccCCC
Q 011508 161 FSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSI---RHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 161 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~~~~~~~ 235 (484)
|++.+.||+|+||.||+|+... ++..||+|+++.... .....+.+|+.+++++ +|+|++++++++...+....
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~--~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~ 78 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLN--TGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRE 78 (287)
T ss_pred CeEEEEecccCceEEEEEEECC--CCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCC
Confidence 5678899999999999999653 578899999874432 2234566787777666 69999999999876553333
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
...+++|||+. ++|.+++.... ...+++..++.++.|+++||+||| +.+++|+||+|+||+++.++.+||+|||
T Consensus 79 ~~~~l~~e~~~-~~l~~~l~~~~--~~~l~~~~~~~~~~~i~~al~~LH---~~~i~h~~l~~~nili~~~~~~~l~dfg 152 (287)
T cd07838 79 LKLTLVFEHVD-QDLATYLSKCP--KPGLPPETIKDLMRQLLRGVDFLH---SHRIVHRDLKPQNILVTSDGQVKIADFG 152 (287)
T ss_pred ceeEEEehhcc-cCHHHHHHHcc--CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhEEEccCCCEEEeccC
Confidence 45899999996 58999887533 235899999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhc
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEAL 395 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 395 (484)
.+....... ......++..|+|||.+.+..++.++|||||||++|||++|+.||..... ...+..+.....
T Consensus 153 ~~~~~~~~~--------~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~-~~~~~~~~~~~~ 223 (287)
T cd07838 153 LARIYSFEM--------ALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSE-ADQLDKIFDVIG 223 (287)
T ss_pred cceeccCCc--------ccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCCh-HHHHHHHHHHcC
Confidence 987763321 11123478889999999988899999999999999999999999875321 111222211111
Q ss_pred chhhhhhc-CcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 396 PERLAEIV-DPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 396 ~~~~~~~~-d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
........ ........ ..............+....+.+++.+||+.||++||+++|++.
T Consensus 224 ~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 224 LPSEEEWPRNVSLPRSS-------FPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred CCChHhcCCCcccchhh-------cccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 00000000 00000000 0000000000001223567889999999999999999999874
No 338
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=8.6e-36 Score=285.34 Aligned_cols=284 Identities=24% Similarity=0.289 Sum_probs=197.5
Q ss_pred HhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCCCCceeEeeeeeeec--
Q 011508 156 KATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIRHRNLVKIITSCVSVD-- 231 (484)
Q Consensus 156 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-- 231 (484)
...++|++.+.||+|+||.||+|+... +++.||+|.++.... .....+.+|++++++++|||++++++++....
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~--~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~ 81 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKD--TGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDA 81 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECC--CCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchh
Confidence 345789999999999999999999643 467899999875432 23356788999999999999999999875432
Q ss_pred ---cCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCc
Q 011508 232 ---FQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELT 308 (484)
Q Consensus 232 ---~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~ 308 (484)
..++...++|+||+++ ++.+++... ...+++..++.++.|++.||+||| +.+|+|+||||+||++++++.
T Consensus 82 ~~~~~~~~~~~lv~e~~~~-~l~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH---~~~i~H~dl~p~nili~~~~~ 154 (302)
T cd07864 82 LDFKKDKGAFYLVFEYMDH-DLMGLLESG---LVHFSEDHIKSFMKQLLEGLNYCH---KKNFLHRDIKCSNILLNNKGQ 154 (302)
T ss_pred hhccccCCcEEEEEcccCc-cHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCc
Confidence 1123478999999965 777777532 335899999999999999999999 899999999999999999999
Q ss_pred eEEcccCcccccccccccCCCCccccccccccccccCccccCC-CCCCcccceehhhHHHHHHHhCCCCCCCCccCCccH
Q 011508 309 AHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTL 387 (484)
Q Consensus 309 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~ 387 (484)
+||+|||.+........ .......++..|+|||.+.+ ..++.++|||||||++|||++|+.||..... ...+
T Consensus 155 ~kl~dfg~~~~~~~~~~------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~-~~~~ 227 (302)
T cd07864 155 IKLADFGLARLYNSEES------RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQE-LAQL 227 (302)
T ss_pred EEeCcccccccccCCcc------cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh-HHHH
Confidence 99999999986643221 11112245778999998754 4578899999999999999999999965321 1111
Q ss_pred hHHHHh---hcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 388 HNFVKE---ALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 388 ~~~~~~---~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
...... ..+....++............. . ...... .....++..+.+++..||+.||++||+++++++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 228 ELISRLCGSPCPAVWPDVIKLPYFNTMKPKK----Q-YRRRLR-EEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred HHHHHHhCCCChhhccccccccccccccccc----c-cccchh-hhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 111110 0010011111000000000000 0 000000 001123567899999999999999999999875
No 339
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=5.4e-36 Score=284.45 Aligned_cols=277 Identities=23% Similarity=0.296 Sum_probs=195.3
Q ss_pred CCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC--ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCcee
Q 011508 161 FSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH--RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFE 238 (484)
Q Consensus 161 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 238 (484)
|++.+.||+|++|.||+|+... ++..+|+|.+.... ......+.+|++++++++|+|++++++++.... ....
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~--~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~---~~~~ 75 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKK--TGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKG---KGSI 75 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECC--CCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCC---CCcE
Confidence 5678899999999999999543 46789999998653 333467889999999999999999999864321 3578
Q ss_pred eEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccc
Q 011508 239 ALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAK 318 (484)
Q Consensus 239 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~ 318 (484)
++|+||++ ++|.+++... ...+++..++.++.|++.||+||| +.+++|+||+|+||++++++.+||+|||.+.
T Consensus 76 ~lv~e~~~-~~l~~~~~~~---~~~~~~~~~~~i~~~i~~al~~LH---~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~ 148 (287)
T cd07840 76 YMVFEYMD-HDLTGLLDSP---EVKFTESQIKCYMKQLLEGLQYLH---SNGILHRDIKGSNILINNDGVLKLADFGLAR 148 (287)
T ss_pred EEEecccc-ccHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEEcCCCCEEEcccccee
Confidence 99999996 5898888633 246899999999999999999999 8899999999999999999999999999998
Q ss_pred ccccccccCCCCccccccccccccccCccccCC-CCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhc--
Q 011508 319 FLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEAL-- 395 (484)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~-- 395 (484)
....... .......++..|+|||.+.+ ..++.++||||||+++|||++|+.||...... ..+........
T Consensus 149 ~~~~~~~------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~-~~~~~~~~~~~~~ 221 (287)
T cd07840 149 PYTKRNS------ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTEL-EQLEKIFELCGSP 221 (287)
T ss_pred eccCCCc------ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCC
Confidence 6643321 11122346788999997654 45789999999999999999999999753211 11111111000
Q ss_pred -chhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 396 -PERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 396 -~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
........+.............. ..........++..+.+++.+||+.+|++||+++++++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 222 TDENWPGVSKLPWFENLKPKKPYK-----RRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred chhhccccccchhhhhccccccch-----hHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 00000000000000000000000 00000001113667899999999999999999999976
No 340
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=5.6e-36 Score=287.87 Aligned_cols=290 Identities=21% Similarity=0.214 Sum_probs=196.2
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCCCCceeEeeeeeeecc---
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIRHRNLVKIITSCVSVDF--- 232 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~--- 232 (484)
.++|++.+.||+|+||.||+|+.. .++..+|+|++..... .....+.+|++++++++|+||+++++++.....
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~--~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 84 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQI--KTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSK 84 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEEC--CCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccc
Confidence 478999999999999999999944 3567899998865432 223467889999999999999999987654321
Q ss_pred CCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEc
Q 011508 233 QGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVS 312 (484)
Q Consensus 233 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~ 312 (484)
......++|+||+. +++.+.+... ...+++..+..++.|+++||+||| +.+|+|+||||+||++++++.++|+
T Consensus 85 ~~~~~~~lv~~~~~-~~l~~~~~~~---~~~~~~~~~~~i~~~l~~al~~lH---~~~i~H~dl~p~nil~~~~~~~~l~ 157 (311)
T cd07866 85 RKRGSVYMVTPYMD-HDLSGLLENP---SVKLTESQIKCYMLQLLEGINYLH---ENHILHRDIKAANILIDNQGILKIA 157 (311)
T ss_pred ccCceEEEEEecCC-cCHHHHHhcc---ccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEC
Confidence 22346789999995 5777777532 345899999999999999999999 8999999999999999999999999
Q ss_pred ccCcccccccccccCCC----CccccccccccccccCccccCC-CCCCcccceehhhHHHHHHHhCCCCCCCCccCCccH
Q 011508 313 DFGLAKFLPEAANNLSS----NQSSSVGVKGTVGYAAPEYGMG-SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTL 387 (484)
Q Consensus 313 Dfg~a~~~~~~~~~~~~----~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~ 387 (484)
|||++............ .........++..|+|||.+.+ ..++.++|||||||++|||++|+.||...... ...
T Consensus 158 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~-~~~ 236 (311)
T cd07866 158 DFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDI-DQL 236 (311)
T ss_pred cCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHH-HHH
Confidence 99999866433211111 1111223457888999998765 45789999999999999999999998653221 111
Q ss_pred hHHHHhhcchhhhhhcCcc-cccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 388 HNFVKEALPERLAEIVDPV-LLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 388 ~~~~~~~~~~~~~~~~d~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
................+.. +............. .... .........+.+++.+|++.||++|||+.|++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 237 HLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYP---RTLE-ERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred HHHHHHhCCCChhhchhhhhcccccccccCCCCC---ccHH-HHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 1111100000000000000 00000000000000 0000 000112356889999999999999999999875
No 341
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=6.5e-36 Score=278.61 Aligned_cols=248 Identities=28% Similarity=0.414 Sum_probs=197.1
Q ss_pred CCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
+|++.+.||+|++|.||+|+.. ..+..|++|.+..... ...+.+.+|++++.+++|+|++++++++. ....
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~--~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~ 73 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNL--ETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIE-----TSDS 73 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEc--CCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEE-----eCCE
Confidence 4788899999999999999854 3467899999876543 34467899999999999999999999854 3457
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
.++||||+++++|.+++... ..+++..++.++.|++.||.||| +.+|+||||+|+||+++.++.++|+|||.+
T Consensus 74 ~~~v~e~~~~~~L~~~~~~~----~~l~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~ 146 (254)
T cd06627 74 LYIILEYAENGSLRQIIKKF----GPFPESLVAVYVYQVLQGLAYLH---EQGVIHRDIKAANILTTKDGVVKLADFGVA 146 (254)
T ss_pred EEEEEecCCCCcHHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCHHHEEECCCCCEEEeccccc
Confidence 89999999999999998743 35899999999999999999999 899999999999999999999999999999
Q ss_pred cccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcch
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPE 397 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 397 (484)
........ ......++..|+|||...+..++.++||||+|+++|+|++|+.||..... ........ ..
T Consensus 147 ~~~~~~~~-------~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~----~~~~~~~~-~~ 214 (254)
T cd06627 147 TKLNDVSK-------DDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNP----MAALFRIV-QD 214 (254)
T ss_pred eecCCCcc-------cccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccH----HHHHHHHh-cc
Confidence 87643221 11224578899999998887889999999999999999999999865321 11111000 00
Q ss_pred hhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 398 RLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 398 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
..+.+ +......+.+++.+||+.+|++|||+.|++.
T Consensus 215 -----~~~~~-----------------------~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 215 -----DHPPL-----------------------PEGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred -----CCCCC-----------------------CCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 00000 1122557889999999999999999999874
No 342
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=1.5e-35 Score=277.66 Aligned_cols=243 Identities=25% Similarity=0.305 Sum_probs=189.6
Q ss_pred cccccceeEEEEEEcCCCCeeEEEEEEeeccCc---cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCceeeEEee
Q 011508 167 IGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR---GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFEALVYE 243 (484)
Q Consensus 167 lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 243 (484)
||.|++|.||+|+.. .++..+|+|++..... ...+.+.+|+.+++.++||||+++++.+. ++...++|+|
T Consensus 1 lg~g~~~~v~~~~~~--~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~lv~e 73 (262)
T cd05572 1 LGVGGFGRVELVKVK--SKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFK-----DKKYIYMLME 73 (262)
T ss_pred CCCCCceEEEEEEEC--CCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEE-----cCCccEEEEe
Confidence 799999999999954 3578899999875432 23467889999999999999999999853 4457899999
Q ss_pred cccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcccccccc
Q 011508 244 LMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFLPEA 323 (484)
Q Consensus 244 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~~~~ 323 (484)
|+++++|.+++... ..+++..+..++.|++.||+||| +++++|+||+|+||+++.++.++|+|||.+......
T Consensus 74 ~~~~~~L~~~l~~~----~~l~~~~~~~~~~~i~~~l~~lH---~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~ 146 (262)
T cd05572 74 YCLGGELWTILRDR----GLFDEYTARFYIACVVLAFEYLH---NRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSG 146 (262)
T ss_pred cCCCCcHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCcc
Confidence 99999999999743 24889999999999999999999 899999999999999999999999999998866332
Q ss_pred cccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchhhhhhc
Q 011508 324 ANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPERLAEIV 403 (484)
Q Consensus 324 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (484)
. ......++..|+|||.+....++.++|+||+|+++|+|++|..||.....+. .+... .+.
T Consensus 147 ~--------~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~~~--------~~~ 207 (262)
T cd05572 147 Q--------KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDP---MEIYN--------DIL 207 (262)
T ss_pred c--------ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCH---HHHHH--------HHh
Confidence 1 1122357889999999888889999999999999999999999997543211 11111 111
Q ss_pred CcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCC-----HHHHHH
Q 011508 404 DPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMN-----MEEVAA 461 (484)
Q Consensus 404 d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~evl~ 461 (484)
+..... ..+..+..++.+++.+||+.+|++||+ ++|+++
T Consensus 208 ~~~~~~-------------------~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 208 KGNGKL-------------------EFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred ccCCCC-------------------CCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 100000 001122567899999999999999999 666554
No 343
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=1.5e-35 Score=279.91 Aligned_cols=243 Identities=23% Similarity=0.282 Sum_probs=182.0
Q ss_pred ccccccceeEEEEEEcCCCCeeEEEEEEeeccCcc---chHHHHHHH---HHHHcCCCCCceeEeeeeeeeccCCCceee
Q 011508 166 LIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRG---ASKSFIAEC---QALRSIRHRNLVKIITSCVSVDFQGNDFEA 239 (484)
Q Consensus 166 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~e~---~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 239 (484)
.||+|+||.||+|... .+++.||+|.+...... ....+..|. ..++...||+|+++++++ ..++..+
T Consensus 1 ~ig~g~~g~Vy~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~ 73 (278)
T cd05606 1 IIGRGGFGEVYGCRKA--DTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAF-----HTPDKLS 73 (278)
T ss_pred CcccCCCeEEEEEEEe--cCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeee-----ecCCEEE
Confidence 4899999999999843 45788999998754321 112233443 344455899999998874 4455889
Q ss_pred EEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcccc
Q 011508 240 LVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKF 319 (484)
Q Consensus 240 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~ 319 (484)
+||||+++++|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||.+..
T Consensus 74 ~v~e~~~g~~L~~~l~~~----~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~di~p~nili~~~~~~kl~dfg~~~~ 146 (278)
T cd05606 74 FILDLMNGGDLHYHLSQH----GVFSEAEMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACD 146 (278)
T ss_pred EEEecCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCCCCHHHEEECCCCCEEEccCcCccc
Confidence 999999999999988632 35899999999999999999999 89999999999999999999999999999875
Q ss_pred cccccccCCCCccccccccccccccCccccCCC-CCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchh
Q 011508 320 LPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGS-EVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPER 398 (484)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 398 (484)
..... .....|+..|+|||.+.++ .++.++||||+||++|||++|+.||........ ......
T Consensus 147 ~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~--~~~~~~----- 210 (278)
T cd05606 147 FSKKK---------PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK--HEIDRM----- 210 (278)
T ss_pred cCccC---------CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccch--HHHHHH-----
Confidence 43211 1123588999999998754 689999999999999999999999975422111 000000
Q ss_pred hhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCC-----CHHHHHHH
Q 011508 399 LAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERM-----NMEEVAAQ 462 (484)
Q Consensus 399 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~ 462 (484)
....+..+ +..++.++.+++.+|+..+|.+|| ++.|+++.
T Consensus 211 -~~~~~~~~-----------------------~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~ 255 (278)
T cd05606 211 -TLTMAVEL-----------------------PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEH 255 (278)
T ss_pred -hhccCCCC-----------------------CCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhC
Confidence 00000000 111256788999999999999999 99999853
No 344
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=8.3e-36 Score=284.28 Aligned_cols=278 Identities=21% Similarity=0.245 Sum_probs=191.8
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCc
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
++|++.+.||+|++|.||+|+. ..+++.||+|.+..... ...+.+.+|++++++++|+|++++++++. .+.
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~--~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~ 74 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARD--RVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVH-----SEK 74 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEe--cCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEe-----cCC
Confidence 4688999999999999999984 34577899998865432 23357889999999999999999999853 445
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecC-CCceEEcccC
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDG-ELTAHVSDFG 315 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~-~~~~kl~Dfg 315 (484)
..++||||++ ++|.+++.... ...+++..+..++.||+.||+||| +++++|+||+|+||+++. ++.+||+|||
T Consensus 75 ~~~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~~qi~~aL~~LH---~~~i~H~dl~p~nill~~~~~~~kl~dfg 148 (294)
T PLN00009 75 RLYLVFEYLD-LDLKKHMDSSP--DFAKNPRLIKTYLYQILRGIAYCH---SHRVLHRDLKPQNLLIDRRTNALKLADFG 148 (294)
T ss_pred eEEEEEeccc-ccHHHHHHhCC--CCCcCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCcceEEEECCCCEEEEcccc
Confidence 8899999995 68888875332 233678888899999999999999 899999999999999985 4579999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCC-CCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhh
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEA 394 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 394 (484)
++....... .......++..|+|||++.+ ..++.++||||+||++|+|+||+.||......+ .+.+... .
T Consensus 149 ~~~~~~~~~-------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~-~~~~~~~-~ 219 (294)
T PLN00009 149 LARAFGIPV-------RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEID-ELFKIFR-I 219 (294)
T ss_pred cccccCCCc-------cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHH-H
Confidence 997543211 11122346889999998765 457899999999999999999999996532111 1111100 0
Q ss_pred cchhhhhhcCccc-ccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 395 LPERLAEIVDPVL-LVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 395 ~~~~~~~~~d~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
.........+... ..+.... ..................++.+++.+|++.+|++||++.++++.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~ 284 (294)
T PLN00009 220 LGTPNEETWPGVTSLPDYKSA----FPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH 284 (294)
T ss_pred hCCCChhhccccccchhhhhh----cccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000000000000 0000000 00000000000011124568899999999999999999999863
No 345
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=7.9e-36 Score=289.27 Aligned_cols=289 Identities=21% Similarity=0.235 Sum_probs=204.0
Q ss_pred CCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC--ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH--RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
+|.+.+.||+|++|.||+|+.. .++..||+|.+.... ....+.+.+|+.+++.++|+||+++++++..........
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~--~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~ 78 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDK--RTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFND 78 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeC--CCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccc
Confidence 5788899999999999999943 357889999987543 334467899999999999999999999865433223346
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
.++||||++ ++|.+++... ..+++..++.++.|++.||+||| +.+|+||||||+||+++.++.++|+|||.+
T Consensus 79 ~~lv~e~~~-~~l~~~l~~~----~~l~~~~~~~i~~~l~~~l~~LH---~~gi~H~dlkp~nili~~~~~~~L~dfg~~ 150 (330)
T cd07834 79 VYIVTELME-TDLHKVIKSP----QPLTDDHIQYFLYQILRGLKYLH---SANVIHRDLKPSNILVNSNCDLKICDFGLA 150 (330)
T ss_pred eEEEecchh-hhHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccCce
Confidence 799999996 5898888632 26899999999999999999999 899999999999999999999999999999
Q ss_pred cccccccccCCCCccccccccccccccCccccCCC-CCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcc
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGS-EVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALP 396 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 396 (484)
......... ........++..|+|||.+.+. .++.++||||||+++|+|++|+.||....... ....+.....
T Consensus 151 ~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~--~~~~i~~~~~ 224 (330)
T cd07834 151 RGVDPDEDE----KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYID--QLNLIVEVLG 224 (330)
T ss_pred Eeecccccc----cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHH--HHHHHHHhcC
Confidence 876433210 0112234578899999998887 78999999999999999999999997643211 0011111000
Q ss_pred h----hhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH--HHHHHHH
Q 011508 397 E----RLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ--LLSFRNK 469 (484)
Q Consensus 397 ~----~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~--L~~i~~~ 469 (484)
. ................ ..............+.+..+.+++.+||+.+|.+|||+++++.. ++.++..
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~ 298 (330)
T cd07834 225 TPSEEDLKFITSEKARNYLKS-----LPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDP 298 (330)
T ss_pred CCChhHhhhccccchhhHHhh-----cccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhccc
Confidence 0 0000000000000000 00000000000011235678999999999999999999999975 5555543
No 346
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=8.1e-37 Score=312.60 Aligned_cols=264 Identities=27% Similarity=0.359 Sum_probs=189.5
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC-ccchHHHHHHHHHHHcCCCCCceeEeeeeeeecc----
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH-RGASKSFIAECQALRSIRHRNLVKIITSCVSVDF---- 232 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~---- 232 (484)
..+|+..+.||+||||.||+++ ++-+|+.||||++.... ........+|+..|++|+|||||+++....+...
T Consensus 478 ~~DFEEL~lLGkGGFG~VvkVR--NKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~ 555 (1351)
T KOG1035|consen 478 LNDFEELELLGKGGFGSVVKVR--NKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTV 555 (1351)
T ss_pred hhhhHHHHHhcCCCCceEEEEe--ecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccc
Confidence 3567888999999999999999 55678999999997653 2234568899999999999999998754332100
Q ss_pred --------------------------------------------------------------------------------
Q 011508 233 -------------------------------------------------------------------------------- 232 (484)
Q Consensus 233 -------------------------------------------------------------------------------- 232 (484)
T Consensus 556 ~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~ 635 (1351)
T KOG1035|consen 556 LEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSD 635 (1351)
T ss_pred ccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccc
Confidence
Q ss_pred -C---------------------CC--------ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHH
Q 011508 233 -Q---------------------GN--------DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEY 282 (484)
Q Consensus 233 -~---------------------~~--------~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~ 282 (484)
+ .+ ...||=||||+..++.++++.+.-.. .....|+++++|+.||+|
T Consensus 636 ~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~---~~d~~wrLFreIlEGLaY 712 (1351)
T KOG1035|consen 636 SEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS---QRDEAWRLFREILEGLAY 712 (1351)
T ss_pred cCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch---hhHHHHHHHHHHHHHHHH
Confidence 0 00 24578899999988888887543211 356789999999999999
Q ss_pred HHhcCCCCeeecCCCCCCeeecCCCceEEcccCccccccc-----------ccccCCCCccccccccccccccCccccCC
Q 011508 283 LHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFLPE-----------AANNLSSNQSSSVGVKGTVGYAAPEYGMG 351 (484)
Q Consensus 283 LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~~~-----------~~~~~~~~~~~~~~~~g~~~y~aPE~~~~ 351 (484)
+| +++||||||||.||+++++..|||+|||+|..... ..+.........+..+||.-|+|||++.+
T Consensus 713 IH---~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~ 789 (1351)
T KOG1035|consen 713 IH---DQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSD 789 (1351)
T ss_pred HH---hCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcc
Confidence 99 89999999999999999999999999999987321 01111122223456789999999999876
Q ss_pred C---CCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccc
Q 011508 352 S---EVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRS 428 (484)
Q Consensus 352 ~---~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~ 428 (484)
. .|+.|+|+||+|||++||+. ||.........+...-...+|.. .++.++.
T Consensus 790 ~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR~g~iP~~-~~f~~~~---------------------- 843 (1351)
T KOG1035|consen 790 TSSNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLRKGSIPEP-ADFFDPE---------------------- 843 (1351)
T ss_pred cccccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcccCCCCCC-ccccccc----------------------
Confidence 5 49999999999999999986 45432111111111111111111 1111111
Q ss_pred cchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 429 FGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 429 ~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
...-.++++++++.||.+|||+.|++.
T Consensus 844 ------~~~e~slI~~Ll~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 844 ------HPEEASLIRWLLSHDPSKRPTATELLN 870 (1351)
T ss_pred ------chHHHHHHHHHhcCCCccCCCHHHHhh
Confidence 334568999999999999999999984
No 347
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=8.5e-37 Score=265.22 Aligned_cols=250 Identities=23% Similarity=0.299 Sum_probs=192.2
Q ss_pred CccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcC-CCCCceeEeeeeeeeccCCCceee
Q 011508 162 SLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR-GASKSFIAECQALRSI-RHRNLVKIITSCVSVDFQGNDFEA 239 (484)
Q Consensus 162 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~ 239 (484)
.....||.|+.|.|++++++. ++..+|||.+..... ...+++...+.++..- ++|.||+.+||+.. +...+
T Consensus 95 ~~l~dlGsGtcG~V~k~~~rs--~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~-----n~dV~ 167 (391)
T KOG0983|consen 95 ENLGDLGSGTCGQVWKMRFRS--TGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFIT-----NTDVF 167 (391)
T ss_pred hhHHhhcCCCccceEEEEEcc--cceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEee-----CchHH
Confidence 456779999999999999654 578999999976543 3446777788777666 58999999999653 33678
Q ss_pred EEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcccc
Q 011508 240 LVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKF 319 (484)
Q Consensus 240 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~ 319 (484)
+.||.| ...++.+++.. ..++++..+-++...+.+||.||.+ .++|+|||+||+|||+|+.|++||||||.+..
T Consensus 168 IcMelM-s~C~ekLlkri---k~piPE~ilGk~tva~v~AL~YLKe--KH~viHRDvKPSNILlDe~GniKlCDFGIsGr 241 (391)
T KOG0983|consen 168 ICMELM-STCAEKLLKRI---KGPIPERILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGNIKLCDFGISGR 241 (391)
T ss_pred HHHHHH-HHHHHHHHHHh---cCCchHHhhhhhHHHHHHHHHHHHH--hcceeecccCccceEEccCCCEEeecccccce
Confidence 999998 44566666533 2458888888999999999999987 78999999999999999999999999999987
Q ss_pred cccccccCCCCccccccccccccccCccccCC---CCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcc
Q 011508 320 LPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG---SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALP 396 (484)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~---~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 396 (484)
+.++. ......|-+.|||||.+.. ..|+.++||||||++++||.||+.||..-..+-..+.+.... .|
T Consensus 242 lvdSk--------AhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~-eP 312 (391)
T KOG0983|consen 242 LVDSK--------AHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNE-EP 312 (391)
T ss_pred eeccc--------ccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhc-CC
Confidence 64432 2233468899999998764 468889999999999999999999998743332222222221 11
Q ss_pred hhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 397 ERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 397 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
+.+.. ...+...+.+++..||..|+.+||...++++.
T Consensus 313 --------P~L~~---------------------~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 313 --------PLLPG---------------------HMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred --------CCCCc---------------------ccCcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence 11111 11136678899999999999999999999854
No 348
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.6e-36 Score=307.72 Aligned_cols=271 Identities=27% Similarity=0.403 Sum_probs=211.2
Q ss_pred HHHhcCCCCccCccccccceeEEEEEEcCCC-----CeeEEEEEEeeccCc-cchHHHHHHHHHHHcC-CCCCceeEeee
Q 011508 154 LFKATDGFSLENLIGAGSFGSVYKGIFDHDD-----HETLVAVKVLNLQHR-GASKSFIAECQALRSI-RHRNLVKIITS 226 (484)
Q Consensus 154 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~~~~~ 226 (484)
++...++..+.+.||+|.||.|++|...... ....||||.++.... ...+.+..|+++|+.+ +|+||+.++|+
T Consensus 291 ~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~ 370 (609)
T KOG0200|consen 291 WEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGA 370 (609)
T ss_pred eeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheee
Confidence 3344455567779999999999999864322 256799999885543 3456899999999999 69999999999
Q ss_pred eeeeccCCCceeeEEeecccCCCHHHHHhhcC---C-------CC--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeec
Q 011508 227 CVSVDFQGNDFEALVYELMVNGSLEEWLHLNR---D-------AP--RNLNLLQRLSIAVDVASTLEYLHHYCETPIVHC 294 (484)
Q Consensus 227 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~---~-------~~--~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~ 294 (484)
|.. ....++|+||+..|+|.++++..+ . .. ..++..+.+.++.|||.|++||+ +.+++||
T Consensus 371 ~t~-----~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~---~~~~vHR 442 (609)
T KOG0200|consen 371 CTQ-----DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLA---SVPCVHR 442 (609)
T ss_pred ecc-----CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHh---hCCccch
Confidence 865 457899999999999999998766 1 11 13899999999999999999999 8999999
Q ss_pred CCCCCCeeecCCCceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-C
Q 011508 295 DLKPSNVLLDGELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-G 373 (484)
Q Consensus 295 dlk~~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g 373 (484)
||.++|||++++..+||+|||+|+............. ... -...|||||.+....++.++|||||||+|||++| |
T Consensus 443 DLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~---~~~-LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG 518 (609)
T KOG0200|consen 443 DLAARNVLITKNKVIKIADFGLARDHYNKDYYRTKSS---AGT-LPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLG 518 (609)
T ss_pred hhhhhhEEecCCCEEEEccccceeccCCCCceEecCC---CCc-cceeecCHHHhccCcccccchhhHHHHHHHHHhhCC
Confidence 9999999999999999999999996544332211100 001 3456999999999999999999999999999999 8
Q ss_pred CCCCCCCccCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCC
Q 011508 374 KGPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRER 453 (484)
Q Consensus 374 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R 453 (484)
..||.+.... ..+.++++ +..+...+..|..++.++|+.||+.+|++|
T Consensus 519 ~~PYp~~~~~-~~l~~~l~-------------------------------~G~r~~~P~~c~~eiY~iM~~CW~~~p~~R 566 (609)
T KOG0200|consen 519 GTPYPGIPPT-EELLEFLK-------------------------------EGNRMEQPEHCSDEIYDLMKSCWNADPEDR 566 (609)
T ss_pred CCCCCCCCcH-HHHHHHHh-------------------------------cCCCCCCCCCCCHHHHHHHHHHhCCCcccC
Confidence 9998752111 01111111 111222367788899999999999999999
Q ss_pred CCHHHHHHHHHHHHH
Q 011508 454 MNMEEVAAQLLSFRN 468 (484)
Q Consensus 454 Pt~~evl~~L~~i~~ 468 (484)
|++.|+.+.++....
T Consensus 567 P~F~~~~~~~~~~l~ 581 (609)
T KOG0200|consen 567 PTFSECVEFFEKHLQ 581 (609)
T ss_pred CCHHHHHHHHHHHHH
Confidence 999999999998543
No 349
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=1e-35 Score=283.97 Aligned_cols=255 Identities=23% Similarity=0.296 Sum_probs=190.3
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcC-CCCCceeEeeeeeeeccCCC
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR-GASKSFIAECQALRSI-RHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~ 235 (484)
-++|++.+.||+|++|.||+|.... ++..||||.++.... .....+..|+.++.+. .|+||++++++|.. .
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~--~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~-----~ 86 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKK--TGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFIT-----D 86 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECC--CCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeec-----C
Confidence 3668889999999999999999543 468899999875432 2335567788777666 59999999999643 4
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
...++||||+ ++++.+++.... ..+++..+..++.|++.|++|||+ ..+|+||||+|+||++++++.+||+|||
T Consensus 87 ~~~~~v~e~~-~~~l~~l~~~~~---~~l~~~~~~~i~~~i~~~l~~lH~--~~~i~H~dl~p~nill~~~~~~kL~dfg 160 (296)
T cd06618 87 SDVFICMELM-STCLDKLLKRIQ---GPIPEDILGKMTVAIVKALHYLKE--KHGVIHRDVKPSNILLDASGNVKLCDFG 160 (296)
T ss_pred CeEEEEeecc-CcCHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh--hCCEecCCCcHHHEEEcCCCCEEECccc
Confidence 4789999998 557877775422 368999999999999999999993 2599999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCCCC----CCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHH
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSE----VSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFV 391 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~----~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 391 (484)
.+..+.... ......++..|+|||.+.+.. ++.++||||||+++|+|++|+.||.........+.
T Consensus 161 ~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~--- 229 (296)
T cd06618 161 ISGRLVDSK--------AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLT--- 229 (296)
T ss_pred cchhccCCC--------cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHH---
Confidence 987653221 111234778899999987553 78899999999999999999999864211110011
Q ss_pred HhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHH
Q 011508 392 KEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQL 463 (484)
Q Consensus 392 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 463 (484)
.+.+....... . ...+..++.+++.+||+.||++||+++++++.-
T Consensus 230 ---------~~~~~~~~~~~-------------~-----~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~ 274 (296)
T cd06618 230 ---------KILQEEPPSLP-------------P-----NEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHP 274 (296)
T ss_pred ---------HHhcCCCCCCC-------------C-----CCCCCHHHHHHHHHHccCChhhCCCHHHHhcCh
Confidence 11111000000 0 011255789999999999999999999998663
No 350
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=1.1e-35 Score=287.41 Aligned_cols=277 Identities=23% Similarity=0.273 Sum_probs=196.6
Q ss_pred HHHhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC--ccchHHHHHHHHHHHcCCCCCceeEeeeeeeec
Q 011508 154 LFKATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH--RGASKSFIAECQALRSIRHRNLVKIITSCVSVD 231 (484)
Q Consensus 154 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 231 (484)
+...+++|++.+.||+|+||.||+|. +..++..||+|.+.... ....+.+.+|++++++++|||++++++++..
T Consensus 5 ~~~~~~~y~~~~~ig~g~~g~v~~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-- 80 (328)
T cd07856 5 VFEITNRYVDLQPVGMGAFGLVCSAR--DQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFIS-- 80 (328)
T ss_pred eeccccceEEEEeecccCCeEEEEEE--ECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEec--
Confidence 44577899999999999999999998 44467889999875432 2234678899999999999999999998632
Q ss_pred cCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEE
Q 011508 232 FQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHV 311 (484)
Q Consensus 232 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl 311 (484)
.....++|+||+ +++|.+++.. ..+++..+..++.|++.||+||| +.+|+||||+|+||++++++.++|
T Consensus 81 --~~~~~~lv~e~~-~~~L~~~~~~-----~~~~~~~~~~~~~ql~~aL~~LH---~~~iiH~dl~p~Nili~~~~~~~l 149 (328)
T cd07856 81 --PLEDIYFVTELL-GTDLHRLLTS-----RPLEKQFIQYFLYQILRGLKYVH---SAGVVHRDLKPSNILINENCDLKI 149 (328)
T ss_pred --CCCcEEEEeehh-ccCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEeECCCCCEEe
Confidence 234678999999 6789888862 24788888899999999999999 899999999999999999999999
Q ss_pred cccCcccccccccccCCCCccccccccccccccCccccCC-CCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHH
Q 011508 312 SDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNF 390 (484)
Q Consensus 312 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~ 390 (484)
+|||.+...... .....++..|+|||.+.+ ..++.++||||||+++|+|++|+.||...... .....
T Consensus 150 ~dfg~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~--~~~~~ 217 (328)
T cd07856 150 CDFGLARIQDPQ----------MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHV--NQFSI 217 (328)
T ss_pred CccccccccCCC----------cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHH
Confidence 999998754221 112346788999998765 56899999999999999999999999653211 00000
Q ss_pred HHhhc---chh-hhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 391 VKEAL---PER-LAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 391 ~~~~~---~~~-~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
..... ++. ...+.+......... ...............+...+.+++.+|++.+|++|||+.+++..
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 218 ITDLLGTPPDDVINTICSENTLRFVQS-----LPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred HHHHhCCCCHHHHHhccchhhHHHHhh-----ccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 11110 111 111111000000000 00000000000011235678999999999999999999998765
No 351
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=1.7e-35 Score=276.95 Aligned_cols=244 Identities=23% Similarity=0.248 Sum_probs=183.3
Q ss_pred CccccccceeEEEEEEcCCCCeeEEEEEEeeccCc---cchHHHHHHHHHH-HcCCCCCceeEeeeeeeeccCCCceeeE
Q 011508 165 NLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR---GASKSFIAECQAL-RSIRHRNLVKIITSCVSVDFQGNDFEAL 240 (484)
Q Consensus 165 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l-~~l~h~niv~~~~~~~~~~~~~~~~~~l 240 (484)
+.||+|+||.||+|.. ..+++.||+|.+..... .....+..|..++ ...+|+|++++++++. .++..++
T Consensus 2 ~~l~~g~~~~v~~a~~--~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~-----~~~~~~l 74 (260)
T cd05611 2 KPISKGAFGSVYLAKK--RSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQ-----SKDYLYL 74 (260)
T ss_pred ccCCcCCCeeEEEEEe--cCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEE-----cCCeEEE
Confidence 5699999999999984 34567899999865432 1122344554444 4558999999999853 4458899
Q ss_pred EeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccccc
Q 011508 241 VYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFL 320 (484)
Q Consensus 241 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~ 320 (484)
|+||+++++|.+++... ..+++..+..++.|++.||.||| +.+++||||+|+||+++.++.++|+|||++...
T Consensus 75 v~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 147 (260)
T cd05611 75 VMEYLNGGDCASLIKTL----GGLPEDWAKQYIAEVVLGVEDLH---QRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNG 147 (260)
T ss_pred EEeccCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCcEEEeecccceec
Confidence 99999999999999743 34889999999999999999999 899999999999999999999999999988754
Q ss_pred ccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchhhh
Q 011508 321 PEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPERLA 400 (484)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 400 (484)
.. .....++..|+|||.+.+..++.++||||||+++|+|++|..||...... .......
T Consensus 148 ~~-----------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-----~~~~~~~----- 206 (260)
T cd05611 148 LE-----------NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPD-----AVFDNIL----- 206 (260)
T ss_pred cc-----------cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHH-----HHHHHHH-----
Confidence 22 11234788999999988888899999999999999999999999653211 1111000
Q ss_pred hhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHH
Q 011508 401 EIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQL 463 (484)
Q Consensus 401 ~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 463 (484)
....... ......++..+.+++.+||+.+|++||++.++.+.|
T Consensus 207 ---~~~~~~~-----------------~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l 249 (260)
T cd05611 207 ---SRRINWP-----------------EEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIK 249 (260)
T ss_pred ---hcccCCC-----------------CcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHH
Confidence 0000000 000112356789999999999999999876654443
No 352
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=5.1e-36 Score=291.66 Aligned_cols=279 Identities=21% Similarity=0.254 Sum_probs=194.9
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeec------
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVD------ 231 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------ 231 (484)
..+|.+.+.||.|+||.||+|+. ..++..||+|.+........+.+.+|++++++++||||+++++++....
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~--~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 81 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVD--SDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTED 81 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEE--CCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccc
Confidence 36899999999999999999984 4467889999987666555677889999999999999999988754321
Q ss_pred ---cCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecC-CC
Q 011508 232 ---FQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDG-EL 307 (484)
Q Consensus 232 ---~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~-~~ 307 (484)
+......++||||++ ++|.+++.. ..+++..++.++.||+.||.||| +.+|+||||||+||+++. ++
T Consensus 82 ~~~~~~~~~~~lv~e~~~-~~L~~~~~~-----~~l~~~~~~~~~~qi~~aL~~LH---~~givH~dikp~Nili~~~~~ 152 (342)
T cd07854 82 VGSLTELNSVYIVQEYME-TDLANVLEQ-----GPLSEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANVFINTEDL 152 (342)
T ss_pred cccccccceEEEEeeccc-ccHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCc
Confidence 111235789999996 689888752 24889999999999999999999 899999999999999974 56
Q ss_pred ceEEcccCcccccccccccCCCCccccccccccccccCccccCC-CCCCcccceehhhHHHHHHHhCCCCCCCCccCCcc
Q 011508 308 TAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLT 386 (484)
Q Consensus 308 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~ 386 (484)
.+||+|||.+......... ........++..|+|||.+.. ..++.++|||||||++|+|++|+.||....... .
T Consensus 153 ~~kl~dfg~~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~-~ 227 (342)
T cd07854 153 VLKIGDFGLARIVDPHYSH----KGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELE-Q 227 (342)
T ss_pred eEEECCcccceecCCcccc----ccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-H
Confidence 7899999998765322110 111112347889999997654 567889999999999999999999996532111 0
Q ss_pred HhHHHHhhcchh----hhhh---cCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHH
Q 011508 387 LHNFVKEALPER----LAEI---VDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEV 459 (484)
Q Consensus 387 ~~~~~~~~~~~~----~~~~---~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev 459 (484)
....... .+.. .... ....+....... .. +... .......++.+++.+|++.||++|||+.|+
T Consensus 228 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~----~~~~--~~~~~~~~~~~li~~~L~~dP~~R~t~~el 297 (342)
T cd07854 228 MQLILES-VPVVREEDRNELLNVIPSFVRNDGGEP---RR----PLRD--LLPGVNPEALDFLEQILTFNPMDRLTAEEA 297 (342)
T ss_pred HHHHHHh-cCCCChHHhhhhhhhhhhhhhhccccc---CC----CHHH--HccCCCHHHHHHHHHHhCCCchhccCHHHH
Confidence 1111100 0000 0000 000000000000 00 0000 001124578899999999999999999999
Q ss_pred HHH
Q 011508 460 AAQ 462 (484)
Q Consensus 460 l~~ 462 (484)
+..
T Consensus 298 l~h 300 (342)
T cd07854 298 LMH 300 (342)
T ss_pred hCC
Confidence 853
No 353
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=2e-35 Score=280.07 Aligned_cols=271 Identities=21% Similarity=0.272 Sum_probs=192.1
Q ss_pred CCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCcc-chHHHHHHHHHHHcCC-CCCceeEeeeeeeeccCCCcee
Q 011508 161 FSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRG-ASKSFIAECQALRSIR-HRNLVKIITSCVSVDFQGNDFE 238 (484)
Q Consensus 161 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~ 238 (484)
|++.+.||+|++|.||+|+... +++.|++|.+...... ......+|+..+.+++ |+|++++++++. .++..
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~--~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~-----~~~~~ 73 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKE--TGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFR-----ENDEL 73 (283)
T ss_pred CeeheeeccCCceEEEEEEECC--CCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhh-----cCCcE
Confidence 5678899999999999999543 4678999998654322 2234567999999998 999999999853 35688
Q ss_pred eEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccc
Q 011508 239 ALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAK 318 (484)
Q Consensus 239 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~ 318 (484)
++||||+ +|+|.+++.... ...+++..++.++.|++.+|.||| +++++|+||+|+||++++++.++|+|||.+.
T Consensus 74 ~lv~e~~-~~~l~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~Lh---~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~ 147 (283)
T cd07830 74 YFVFEYM-EGNLYQLMKDRK--GKPFSESVIRSIIYQILQGLAHIH---KHGFFHRDLKPENLLVSGPEVVKIADFGLAR 147 (283)
T ss_pred EEEEecC-CCCHHHHHHhcc--cccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCCEEEeecccce
Confidence 9999999 889999887443 245899999999999999999999 8999999999999999999999999999987
Q ss_pred ccccccccCCCCccccccccccccccCccccC-CCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcch
Q 011508 319 FLPEAANNLSSNQSSSVGVKGTVGYAAPEYGM-GSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPE 397 (484)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 397 (484)
...... ......++..|+|||.+. ...++.++||||||+++|||++|+.||....... ...+ .......
T Consensus 148 ~~~~~~--------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~-~~~~-~~~~~~~ 217 (283)
T cd07830 148 EIRSRP--------PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEID-QLYK-ICSVLGT 217 (283)
T ss_pred eccCCC--------CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHH-HHHH-HHHhcCC
Confidence 653221 112235788999999774 4567899999999999999999999986532111 0100 0000000
Q ss_pred h----hhh--hcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 398 R----LAE--IVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 398 ~----~~~--~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
. ..+ ..+............ .......+. ....+.+++.+||+.+|++|||++|+++.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~-~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 218 PTKQDWPEGYKLASKLGFRFPQFAP-------TSLHQLIPN-ASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred CChhhhhhHhhhhcccccccccccc-------ccHHHHccc-CCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 0 000 000000000000000 000000001 14568899999999999999999999753
No 354
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=4.2e-35 Score=281.72 Aligned_cols=245 Identities=27% Similarity=0.369 Sum_probs=188.0
Q ss_pred CCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc---cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 161 FSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR---GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 161 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
|...+.||+|+||.||+|+. ..++..|++|.+..... .....+.+|+++++.++|+|++++++++.. ...
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~--~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~ 95 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATN--SHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLK-----EHT 95 (313)
T ss_pred hhcceeeccCCCeEEEEEEE--CCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEe-----CCE
Confidence 55667899999999999984 34578899999875432 223567889999999999999999998644 347
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
.++||||+. |++.+++... ...+++.+++.++.|++.+++||| +.+++|+||+|+||+++.++.+||+|||.+
T Consensus 96 ~~lv~e~~~-~~l~~~l~~~---~~~l~~~~~~~~~~qi~~al~~LH---~~gi~H~dl~p~nili~~~~~~kL~dfg~~ 168 (313)
T cd06633 96 AWLVMEYCL-GSASDLLEVH---KKPLQEVEIAAITHGALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSA 168 (313)
T ss_pred EEEEEecCC-CCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChhhEEECCCCCEEEeecCCC
Confidence 899999994 6888877632 235899999999999999999999 899999999999999999999999999987
Q ss_pred cccccccccCCCCccccccccccccccCccccC---CCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhh
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGM---GSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEA 394 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 394 (484)
..... .....++..|+|||++. ...++.++|||||||++|+|++|..||....... .......
T Consensus 169 ~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~-~~~~~~~-- 234 (313)
T cd06633 169 SKSSP-----------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALYHIAQ-- 234 (313)
T ss_pred cccCC-----------CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHh--
Confidence 64311 11235788999999874 4568889999999999999999999986531110 0000000
Q ss_pred cchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 395 LPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 395 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
... +... .......+.+++.+||+.+|.+||++.+++..
T Consensus 235 --~~~-----~~~~----------------------~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 235 --NDS-----PTLQ----------------------SNEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred --cCC-----CCCC----------------------ccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000 0000 11124468899999999999999999999864
No 355
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=2.1e-35 Score=279.93 Aligned_cols=270 Identities=22% Similarity=0.256 Sum_probs=195.9
Q ss_pred CCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCcc--chHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCcee
Q 011508 161 FSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRG--ASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFE 238 (484)
Q Consensus 161 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 238 (484)
|++.+.||+|++|.||+|.. ..++..+++|.++..... ....+.+|++++++++|+||+++++++. .+...
T Consensus 1 y~~~~~i~~g~~~~v~~~~~--~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~ 73 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARD--KLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFR-----HKGDL 73 (283)
T ss_pred CccceeeecCCCceEEEEEc--CCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhc-----cCCCE
Confidence 56778999999999999984 445788999998754332 3467889999999999999999999853 34588
Q ss_pred eEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccc
Q 011508 239 ALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAK 318 (484)
Q Consensus 239 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~ 318 (484)
++|+||++ ++|.+++.... ..+++..++.++.|++.||+||| ..+|+|+||+|+||+++.++.++|+|||.+.
T Consensus 74 ~~v~e~~~-~~l~~~l~~~~---~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~df~~~~ 146 (283)
T cd05118 74 YLVFEFMD-TDLYKLIKDRQ---RGLPESLIKSYLYQLLQGLAFCH---SHGILHRDLKPENLLINTEGVLKLADFGLAR 146 (283)
T ss_pred EEEEeccC-CCHHHHHHhhc---ccCCHHHHHHHHHHHHHHHHHHH---HCCeeecCcCHHHEEECCCCcEEEeeeeeeE
Confidence 99999996 58888886432 45899999999999999999999 8999999999999999999999999999987
Q ss_pred ccccccccCCCCccccccccccccccCccccCCC-CCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcch
Q 011508 319 FLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGS-EVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPE 397 (484)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 397 (484)
...... .......++..|+|||.+.+. .++.++||||+|+++|+|+||+.||......+ .+.. .......
T Consensus 147 ~~~~~~-------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~-~~~~-~~~~~~~ 217 (283)
T cd05118 147 SFGSPV-------RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEID-QLFK-IFRTLGT 217 (283)
T ss_pred ecCCCc-------ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHH-HHHHcCC
Confidence 664322 011223577889999988776 78999999999999999999999986532110 1111 1111100
Q ss_pred ----hhhhhcCcccc--cccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 398 ----RLAEIVDPVLL--VEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 398 ----~~~~~~d~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
......+.... ....... .........+++.++.+++.+||+.||.+||++.+++.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 218 PDPEVWPKFTSLARNYKFSFPKKA--------GMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred CchHhcccchhhhhhhhhhhcccc--------ccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 00111000000 0000000 00000012345678999999999999999999999975
No 356
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=1.7e-35 Score=288.06 Aligned_cols=284 Identities=20% Similarity=0.225 Sum_probs=196.3
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC--ccchHHHHHHHHHHHcCCCCCceeEeeeeeeecc-CC
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH--RGASKSFIAECQALRSIRHRNLVKIITSCVSVDF-QG 234 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~-~~ 234 (484)
.++|.+.+.||+|+||.||+|+.. .++..||+|++.... ......+.+|+.++++++|+||+++++++..... ..
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 91 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDK--RTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDE 91 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeC--CCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCC
Confidence 478999999999999999999843 357889999886432 2223568899999999999999999998654321 12
Q ss_pred CceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEccc
Q 011508 235 NDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDF 314 (484)
Q Consensus 235 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 314 (484)
....++|+||+. .+|.++.. ..+++..+..++.|++.||+||| +.+++||||||+||+++.++.+||+||
T Consensus 92 ~~~~~lv~e~~~-~~l~~~~~------~~~~~~~~~~~~~qi~~aL~~LH---~~~i~H~dlkp~NIll~~~~~~kL~df 161 (342)
T cd07879 92 FQDFYLVMPYMQ-TDLQKIMG------HPLSEDKVQYLVYQMLCGLKYIH---SAGIIHRDLKPGNLAVNEDCELKILDF 161 (342)
T ss_pred CceEEEEecccc-cCHHHHHc------CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeC
Confidence 235689999995 47776652 24889999999999999999999 899999999999999999999999999
Q ss_pred CcccccccccccCCCCccccccccccccccCccccCC-CCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHh
Q 011508 315 GLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKE 393 (484)
Q Consensus 315 g~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 393 (484)
|+++..... .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||....... .+......
T Consensus 162 g~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~-~~~~~~~~ 230 (342)
T cd07879 162 GLARHADAE----------MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILKV 230 (342)
T ss_pred CCCcCCCCC----------CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHh
Confidence 998754221 112357888999998766 468899999999999999999999997532110 11111100
Q ss_pred --hcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH--HHHHHH
Q 011508 394 --ALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ--LLSFRN 468 (484)
Q Consensus 394 --~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~--L~~i~~ 468 (484)
.......+..+......... ....................+.+++.+||+.||++||+++|++.. ++.+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~ 305 (342)
T cd07879 231 TGVPGPEFVQKLEDKAAKSYIK----SLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRD 305 (342)
T ss_pred cCCCCHHHHHHhcccchHHHHh----hcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccc
Confidence 00000111110000000000 000000000000001124568899999999999999999999954 666654
No 357
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=1.7e-35 Score=287.04 Aligned_cols=285 Identities=21% Similarity=0.222 Sum_probs=195.7
Q ss_pred CCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcC-CCCCceeEeeeeeeeccCCCc
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSI-RHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 236 (484)
+|++.+.||+|+||.||+++......+..||+|.+..... ...+.+.+|+++++++ +|+||+++++.+.... ....
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~-~~~~ 79 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFP-GNFN 79 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeecc-ccCC
Confidence 4778899999999999999965443377899999864322 2245688899999999 5999999998754321 2334
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCc
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGL 316 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 316 (484)
..++++||+ +++|.+++.. ...+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||.
T Consensus 80 ~~~~~~e~~-~~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH---~~givH~dlkp~Nili~~~~~~kl~Dfg~ 151 (332)
T cd07857 80 ELYLYEELM-EADLHQIIRS----GQPLTDAHFQSFIYQILCGLKYIH---SANVLHRDLKPGNLLVNADCELKICDFGL 151 (332)
T ss_pred cEEEEEecc-cCCHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHeEEcCCCCEEeCcCCC
Confidence 578899998 4789998863 345899999999999999999999 89999999999999999999999999999
Q ss_pred ccccccccccCCCCccccccccccccccCccccCC-CCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhh-
Q 011508 317 AKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEA- 394 (484)
Q Consensus 317 a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~- 394 (484)
++.+...... .........|+..|+|||...+ ..++.++||||+||++|+|++|+.||...... ..+.......
T Consensus 152 a~~~~~~~~~---~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~-~~~~~~~~~~~ 227 (332)
T cd07857 152 ARGFSENPGE---NAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYV-DQLNQILQVLG 227 (332)
T ss_pred ceeccccccc---ccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHH-HHHHHHHHHhC
Confidence 9866432211 1111123468899999998665 56899999999999999999999998653211 0011111100
Q ss_pred -cch-hhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 395 -LPE-RLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 395 -~~~-~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
.++ ....+.++.............. .... .....+...+.+++.+|++.||++|||+.|++..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~ 292 (332)
T cd07857 228 TPDEETLSRIGSPKAQNYIRSLPNIPK----KPFE-SIFPNANPLALDLLEKLLAFDPTKRISVEEALEH 292 (332)
T ss_pred CCCHHHHHhhhhhhHHHHHHhccccCC----cchH-hhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 000 0111111100000000000000 0000 0001125678999999999999999999998743
No 358
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=1.5e-35 Score=281.72 Aligned_cols=258 Identities=22% Similarity=0.263 Sum_probs=195.3
Q ss_pred CCCccCccccccceeEEEEEEcCC-CCeeEEEEEEeeccC----ccchHHHHHHHHHHHcC-CCCCceeEeeeeeeeccC
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHD-DHETLVAVKVLNLQH----RGASKSFIAECQALRSI-RHRNLVKIITSCVSVDFQ 233 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~-~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 233 (484)
+|++.+.||+|++|.||+++.... .+++.||+|+++... ....+.+.+|+.++.++ +|+||+++++.+ .
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~-----~ 75 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAF-----Q 75 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheee-----e
Confidence 477889999999999999985432 356789999987432 12335678999999999 699999999874 4
Q ss_pred CCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcc
Q 011508 234 GNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSD 313 (484)
Q Consensus 234 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~D 313 (484)
.+...++||||+++++|.+++... ..+++..+..++.|++++|+||| +.+++||||+|+||+++.++.++|+|
T Consensus 76 ~~~~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~ql~~~l~~lH---~~~~~H~dl~p~nil~~~~~~~~l~d 148 (288)
T cd05583 76 TDTKLHLILDYVNGGELFTHLYQR----EHFTESEVRVYIAEIVLALDHLH---QLGIIYRDIKLENILLDSEGHVVLTD 148 (288)
T ss_pred cCCEEEEEEecCCCCcHHHHHhhc----CCcCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEEE
Confidence 455789999999999999998632 34889999999999999999999 89999999999999999999999999
Q ss_pred cCcccccccccccCCCCccccccccccccccCccccCCCC--CCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHH
Q 011508 314 FGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSE--VSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFV 391 (484)
Q Consensus 314 fg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~--~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 391 (484)
||+++....... .......++..|+|||...+.. .+.++||||||+++|||++|..||...... .......
T Consensus 149 fg~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~-~~~~~~~ 221 (288)
T cd05583 149 FGLSKEFLAEEE------ERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQ-NSQSEIS 221 (288)
T ss_pred Cccccccccccc------cccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCccc-chHHHHH
Confidence 999876533211 1112245788999999987654 788999999999999999999998642111 0111111
Q ss_pred HhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHH
Q 011508 392 KEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLS 465 (484)
Q Consensus 392 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 465 (484)
.. +...... .+..+...+.+++.+||+.||++|||+.+|.+.|+.
T Consensus 222 ~~--------~~~~~~~---------------------~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 222 RR--------ILKSKPP---------------------FPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred HH--------HHccCCC---------------------CCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 10 0000000 011124568899999999999999999888776654
No 359
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=1.1e-35 Score=278.86 Aligned_cols=249 Identities=23% Similarity=0.323 Sum_probs=190.1
Q ss_pred cccccceeEEEEEEcCCCCeeEEEEEEeeccCc---cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCceeeEEee
Q 011508 167 IGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR---GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFEALVYE 243 (484)
Q Consensus 167 lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 243 (484)
||.|+||.||+++.. .++..+++|++..... ...+.+.+|++++++++|+|++++++.+ ..+...++|+|
T Consensus 1 lg~g~~~~vy~~~~~--~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-----~~~~~~~lv~e 73 (265)
T cd05579 1 ISKGAYGRVFLAKKK--STGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSF-----QGKKNLYLVME 73 (265)
T ss_pred CCCCCceEEEEEEEC--CCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHhe-----ecCcEEEEEEe
Confidence 689999999999954 3568899999875433 3446788999999999999999998874 44568899999
Q ss_pred cccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcccccccc
Q 011508 244 LMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFLPEA 323 (484)
Q Consensus 244 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~~~~ 323 (484)
|+++++|.+++.... .+++..++.++.|++.||+||| +.+++|+||+|+||++++++.++|+|||++......
T Consensus 74 ~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~ 146 (265)
T cd05579 74 YLPGGDLASLLENVG----SLDEDVARIYIAEIVLALEYLH---SNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVR 146 (265)
T ss_pred cCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HcCeecCCCCHHHeEEcCCCCEEEEecccchhcccC
Confidence 999999999997432 5899999999999999999999 899999999999999999999999999998754322
Q ss_pred cccC-CCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchhhhhh
Q 011508 324 ANNL-SSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPERLAEI 402 (484)
Q Consensus 324 ~~~~-~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (484)
.... ...........++..|+|||.......+.++||||||+++|++++|+.||..... ...... +
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~-----~~~~~~--------~ 213 (265)
T cd05579 147 RQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETP-----EEIFQN--------I 213 (265)
T ss_pred cccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH-----HHHHHH--------H
Confidence 1100 0001112234578899999998888899999999999999999999999865321 111110 0
Q ss_pred cCcccccccccccchhhhhhhccccccchhH--HHHHHHhHhhccCCCCcCCCCCHHHHHHHH
Q 011508 403 VDPVLLVEREEGETSEANAHKQRTRSFGGKE--CLVSVLGIGVICSSELPRERMNMEEVAAQL 463 (484)
Q Consensus 403 ~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 463 (484)
....... +.. .+..+.+++.+|++.+|++|||+.++.+.|
T Consensus 214 ~~~~~~~---------------------~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l 255 (265)
T cd05579 214 LNGKIEW---------------------PEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIK 255 (265)
T ss_pred hcCCcCC---------------------CccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHh
Confidence 0000000 011 156788999999999999999996555544
No 360
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=1.6e-35 Score=277.13 Aligned_cols=251 Identities=22% Similarity=0.254 Sum_probs=191.1
Q ss_pred CCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC-----ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCC
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH-----RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQG 234 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 234 (484)
+|.+.+.||+|+||.||+++.... +..+++|+++... .....++..|+.+++.++|||++++++++ ..
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~ 73 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKA--VAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASF-----LE 73 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCC--CCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHH-----hc
Confidence 478889999999999999985433 3335555544211 22334577899999999999999999985 34
Q ss_pred CceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEccc
Q 011508 235 NDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDF 314 (484)
Q Consensus 235 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 314 (484)
....++|+||+++++|.+++.........+++..++.++.|++.||.||| +.+++|+||+|+||+++. +.++|+||
T Consensus 74 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~h~~l~~~nili~~-~~~~l~d~ 149 (260)
T cd08222 74 RDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMH---QRRILHRDLKAKNIFLKN-NLLKIGDF 149 (260)
T ss_pred CCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHH---HcCccccCCChhheEeec-CCEeeccc
Confidence 45789999999999999999765545567999999999999999999999 899999999999999975 56999999
Q ss_pred CcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhh
Q 011508 315 GLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEA 394 (484)
Q Consensus 315 g~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 394 (484)
|.+....... .......++..|+|||...+..++.++|+||||+++|+|++|..||.... ........
T Consensus 150 g~~~~~~~~~-------~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~-----~~~~~~~~ 217 (260)
T cd08222 150 GVSRLLMGSC-------DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQN-----FLSVVLRI 217 (260)
T ss_pred CceeecCCCc-------ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCcc-----HHHHHHHH
Confidence 9987653221 11122457889999999888888999999999999999999999986421 11111110
Q ss_pred cchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 395 LPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 395 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
... ..+.+ +..++.++.+++.+||+.+|++||++.|+++
T Consensus 218 ~~~-----~~~~~-----------------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 218 VEG-----PTPSL-----------------------PETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred HcC-----CCCCC-----------------------cchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 000 00000 1233567899999999999999999999975
No 361
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=3e-35 Score=282.09 Aligned_cols=248 Identities=25% Similarity=0.340 Sum_probs=189.9
Q ss_pred CCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCc
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
.|+..+.||+|+||.||+|+.. .++..+|+|.+.... .....++.+|+++++.++|+|++++++++.. ..
T Consensus 16 ~~~~~~~lg~g~~g~v~~~~~~--~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~ 88 (308)
T cd06634 16 LFSDLREIGHGSFGAVYFARDV--RNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR-----EH 88 (308)
T ss_pred HHHHHHheeeCCCEEEEEEEEc--CCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEc-----CC
Confidence 3666789999999999999954 356789999886432 2233567889999999999999999998643 34
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCc
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGL 316 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 316 (484)
..++||||+. |++.+++... ...+++.++..++.|++.|+.||| +.+++||||+|+||+++.++.++|+|||.
T Consensus 89 ~~~lv~e~~~-~~l~~~~~~~---~~~l~~~~~~~~~~~l~~~l~~LH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~ 161 (308)
T cd06634 89 TAWLVMEYCL-GSASDLLEVH---KKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGS 161 (308)
T ss_pred eeEEEEEccC-CCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHhEEECCCCcEEECCccc
Confidence 7899999995 6888877533 234889999999999999999999 89999999999999999999999999999
Q ss_pred ccccccccccCCCCccccccccccccccCccccC---CCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHh
Q 011508 317 AKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGM---GSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKE 393 (484)
Q Consensus 317 a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 393 (484)
+...... ....++..|+|||.+. ...++.++|||||||++|+|++|+.||....... ....+...
T Consensus 162 ~~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~~~~~~ 229 (308)
T cd06634 162 ASIMAPA-----------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALYHIAQN 229 (308)
T ss_pred ceeecCc-----------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHH-HHHHHhhc
Confidence 8765321 1234788999999864 3567889999999999999999999986531110 00000000
Q ss_pred hcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHH
Q 011508 394 ALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLL 464 (484)
Q Consensus 394 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 464 (484)
. .+.. ....+...+.+++.+||+.+|++||++.++++.-.
T Consensus 230 ~---------~~~~----------------------~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~ 269 (308)
T cd06634 230 E---------SPAL----------------------QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF 269 (308)
T ss_pred C---------CCCc----------------------CcccccHHHHHHHHHHhhCCcccCCCHHHHhhCcc
Confidence 0 0000 01123567889999999999999999999986643
No 362
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=2.4e-35 Score=287.23 Aligned_cols=286 Identities=19% Similarity=0.226 Sum_probs=200.8
Q ss_pred cHHhHHHhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCCCCceeEeeee
Q 011508 150 SYQNLFKATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIRHRNLVKIITSC 227 (484)
Q Consensus 150 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~ 227 (484)
...++...+++|.+.+.||+|+||.||+|.. ..++..||+|++..... ...+.+.+|+.++++++|+||+++++++
T Consensus 8 ~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~--~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~ 85 (345)
T cd07877 8 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFD--TKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVF 85 (345)
T ss_pred HHHHHhhccCceEEEEEeeecCCeEEEEEEE--cCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeee
Confidence 3456677889999999999999999999984 34578899999875322 2245678899999999999999999886
Q ss_pred eeec-cCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCC
Q 011508 228 VSVD-FQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGE 306 (484)
Q Consensus 228 ~~~~-~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~ 306 (484)
.... +......+++++++ +++|.+++.. ..+++..++.++.|++.||+||| +.+|+||||||+||+++.+
T Consensus 86 ~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~ 156 (345)
T cd07877 86 TPARSLEEFNDVYLVTHLM-GADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNED 156 (345)
T ss_pred eecccccccccEEEEehhc-ccCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChHHEEEcCC
Confidence 5332 12233567888887 8899888762 24889999999999999999999 8999999999999999999
Q ss_pred CceEEcccCcccccccccccCCCCccccccccccccccCccccCC-CCCCcccceehhhHHHHHHHhCCCCCCCCccCCc
Q 011508 307 LTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNL 385 (484)
Q Consensus 307 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~ 385 (484)
+.+||+|||++...... .....++..|+|||...+ ..++.++|||||||++|||++|+.||...... .
T Consensus 157 ~~~kl~dfg~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~-~ 225 (345)
T cd07877 157 CELKILDFGLARHTDDE----------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-D 225 (345)
T ss_pred CCEEEeccccccccccc----------ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-H
Confidence 99999999998754221 122357889999998765 56888999999999999999999999643211 1
Q ss_pred cHhHHHHhh--cchh-hhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 386 TLHNFVKEA--LPER-LAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 386 ~~~~~~~~~--~~~~-~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
.+....... .+.. ...+.+... ... ...........-..........+.+++.+|++.||.+||++.++++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 226 QLKLILRLVGTPGAELLKKISSESA-RNY----IQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred HHHHHHHHhCCCCHHHHhhcccHhH-HHH----HHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 111111110 0011 111110000 000 00000000000000000124568899999999999999999999865
No 363
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=1.3e-35 Score=280.84 Aligned_cols=255 Identities=25% Similarity=0.363 Sum_probs=197.7
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcCC-CCCceeEeeeeeeeccCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSIR-HRNLVKIITSCVSVDFQG 234 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~ 234 (484)
++|.+.+.||+|++|.||+|+.. .++..||+|++.... ....+.+.+|.+++++++ |+||+++++++ .+
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~--~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~-----~~ 73 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEK--ETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTF-----QD 73 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEc--CCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHh-----cC
Confidence 46888999999999999999854 357889999987532 223456888999999998 99999999884 45
Q ss_pred CceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEccc
Q 011508 235 NDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDF 314 (484)
Q Consensus 235 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 314 (484)
++..++||||+++++|.+++... ..+++..++.++.|++.||+||| +.+++|+||+|+||+++.++.++|+||
T Consensus 74 ~~~~~lv~e~~~~~~L~~~l~~~----~~l~~~~~~~i~~ql~~~l~~Lh---~~~~~H~dl~~~ni~i~~~~~~~l~df 146 (280)
T cd05581 74 EENLYFVLEYAPNGELLQYIRKY----GSLDEKCTRFYAAEILLALEYLH---SKGIIHRDLKPENILLDKDMHIKITDF 146 (280)
T ss_pred CceEEEEEcCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEecCC
Confidence 56889999999999999999743 25899999999999999999999 899999999999999999999999999
Q ss_pred CcccccccccccCC-------------CCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCc
Q 011508 315 GLAKFLPEAANNLS-------------SNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMF 381 (484)
Q Consensus 315 g~a~~~~~~~~~~~-------------~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~ 381 (484)
|++........... ..........++..|+|||......++.++||||||++++++++|+.||....
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 226 (280)
T cd05581 147 GTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSN 226 (280)
T ss_pred ccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCcc
Confidence 99886643321100 00122233457889999999888889999999999999999999999997532
Q ss_pred cCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCH----H
Q 011508 382 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNM----E 457 (484)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~----~ 457 (484)
.. ... ..+.+..... +...+..+.+++.+||+.+|++||++ +
T Consensus 227 ~~-----~~~--------~~~~~~~~~~---------------------~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~ 272 (280)
T cd05581 227 EY-----LTF--------QKILKLEYSF---------------------PPNFPPDAKDLIEKLLVLDPQDRLGVNEGYD 272 (280)
T ss_pred HH-----HHH--------HHHHhcCCCC---------------------CCccCHHHHHHHHHHhcCCHhhCCCcccCHH
Confidence 10 000 0010000000 11124568899999999999999999 6
Q ss_pred HHHH
Q 011508 458 EVAA 461 (484)
Q Consensus 458 evl~ 461 (484)
|+++
T Consensus 273 ~ll~ 276 (280)
T cd05581 273 ELKA 276 (280)
T ss_pred HHhc
Confidence 6654
No 364
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=1.6e-35 Score=288.15 Aligned_cols=282 Identities=19% Similarity=0.215 Sum_probs=196.8
Q ss_pred HHHhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCCCCceeEeeeeeeec
Q 011508 154 LFKATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIRHRNLVKIITSCVSVD 231 (484)
Q Consensus 154 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 231 (484)
+....++|++.+.||+|+||.||+|.. ..++..||+|++..... .....+.+|+.++++++|+||+++++++....
T Consensus 10 ~~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 87 (343)
T cd07880 10 IWEVPDRYRDLKQVGSGAYGTVCSALD--RRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDL 87 (343)
T ss_pred hhccccceEEEEEeeecCCeEEEEEEE--CCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCc
Confidence 344567899999999999999999984 44578899999864322 22356789999999999999999999864322
Q ss_pred c-CCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceE
Q 011508 232 F-QGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAH 310 (484)
Q Consensus 232 ~-~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~k 310 (484)
. ......++||||+ +++|.+++.. ..+++..++.++.|++.||+||| +.+|+||||||+||+++.++.++
T Consensus 88 ~~~~~~~~~lv~e~~-~~~l~~~~~~-----~~l~~~~~~~i~~qi~~al~~LH---~~gi~H~dlkp~Nill~~~~~~k 158 (343)
T cd07880 88 SLDRFHDFYLVMPFM-GTDLGKLMKH-----EKLSEDRIQFLVYQMLKGLKYIH---AAGIIHRDLKPGNLAVNEDCELK 158 (343)
T ss_pred cccccceEEEEEecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEE
Confidence 1 1113468999999 7899988862 34889999999999999999999 89999999999999999999999
Q ss_pred EcccCcccccccccccCCCCccccccccccccccCccccCC-CCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhH
Q 011508 311 VSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHN 389 (484)
Q Consensus 311 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~ 389 (484)
|+|||.+...... .....++..|+|||.+.+ ..++.++||||+|+++|++++|+.||....... ...+
T Consensus 159 l~dfg~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~-~~~~ 227 (343)
T cd07880 159 ILDFGLARQTDSE----------MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLD-QLME 227 (343)
T ss_pred EeecccccccccC----------ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHH
Confidence 9999998755321 112356889999998765 458899999999999999999999997532110 1111
Q ss_pred HHHhh--cchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 390 FVKEA--LPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 390 ~~~~~--~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
..... .+....+.+...-...... .........-......+...+.+++.+|++.||++|||+.++++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~ 297 (343)
T cd07880 228 IMKVTGTPSKEFVQKLQSEDAKNYVK----KLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA 297 (343)
T ss_pred HHHhcCCCCHHHHHhhcchhHHHHHH----hccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 11100 0001111110000000000 00000000000001233557889999999999999999999984
No 365
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=3.7e-35 Score=285.13 Aligned_cols=280 Identities=21% Similarity=0.259 Sum_probs=192.8
Q ss_pred cCCCC-ccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccc--------------hHHHHHHHHHHHcCCCCCcee
Q 011508 158 TDGFS-LENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGA--------------SKSFIAECQALRSIRHRNLVK 222 (484)
Q Consensus 158 ~~~~~-~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~--------------~~~~~~e~~~l~~l~h~niv~ 222 (484)
.++|. +.+.||+|+||.||+|.. ...++.||+|.++...... ...+.+|+++++.++|+||++
T Consensus 7 ~~ry~~~~~~ig~G~~g~vy~~~~--~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~ 84 (335)
T PTZ00024 7 SERYIQKGAHLGEGTYGKVEKAYD--TLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMG 84 (335)
T ss_pred ccchhhhhhcccCCCceeEEEEEE--CCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceee
Confidence 35565 457799999999999984 3457889999986543211 124778999999999999999
Q ss_pred EeeeeeeeccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCee
Q 011508 223 IITSCVSVDFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVL 302 (484)
Q Consensus 223 ~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIl 302 (484)
+++++. .+...++||||+. |+|.+++... ..+++.....++.|++.||+||| +.+++|+||+|+||+
T Consensus 85 ~~~~~~-----~~~~~~lv~e~~~-~~l~~~l~~~----~~~~~~~~~~~~~ql~~aL~~LH---~~~i~H~dl~~~nil 151 (335)
T PTZ00024 85 LVDVYV-----EGDFINLVMDIMA-SDLKKVVDRK----IRLTESQVKCILLQILNGLNVLH---KWYFMHRDLSPANIF 151 (335)
T ss_pred eeEEEe-----cCCcEEEEEeccc-cCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHeE
Confidence 999854 3458899999995 6999988632 34889999999999999999999 899999999999999
Q ss_pred ecCCCceEEcccCcccccccccccC------C-CCccccccccccccccCccccCCC-CCCcccceehhhHHHHHHHhCC
Q 011508 303 LDGELTAHVSDFGLAKFLPEAANNL------S-SNQSSSVGVKGTVGYAAPEYGMGS-EVSTSGDVYSFGILLLEMFTGK 374 (484)
Q Consensus 303 l~~~~~~kl~Dfg~a~~~~~~~~~~------~-~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dvws~Gvvl~elltg~ 374 (484)
++.++.++|+|||.+.......... . ..........++..|+|||.+.+. .++.++|||||||++|||++|+
T Consensus 152 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~ 231 (335)
T PTZ00024 152 INSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGK 231 (335)
T ss_pred ECCCCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 9999999999999987654111000 0 001111223467889999988764 4689999999999999999999
Q ss_pred CCCCCCccCCccHhHHHHhhcchh----hhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCc
Q 011508 375 GPTNEMFTGNLTLHNFVKEALPER----LAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELP 450 (484)
Q Consensus 375 ~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP 450 (484)
.||....... .+. .+....... .....+-.......... . .... .....+...+.+++..|++.+|
T Consensus 232 ~p~~~~~~~~-~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-----~~~~-~~~~~~~~~~~~li~~~l~~~P 301 (335)
T PTZ00024 232 PLFPGENEID-QLG-RIFELLGTPNEDNWPQAKKLPLYTEFTPRK--P-----KDLK-TIFPNASDDAIDLLQSLLKLNP 301 (335)
T ss_pred CCCCCCCHHH-HHH-HHHHHhCCCchhhCcchhhcccccccCcCC--c-----ccHH-HhCcCCChHHHHHHHHHcCCCc
Confidence 9997542211 111 111100000 00000000000000000 0 0000 0011225678899999999999
Q ss_pred CCCCCHHHHHHH
Q 011508 451 RERMNMEEVAAQ 462 (484)
Q Consensus 451 ~~RPt~~evl~~ 462 (484)
++|||++|++..
T Consensus 302 ~~R~s~~~~l~~ 313 (335)
T PTZ00024 302 LERISAKEALKH 313 (335)
T ss_pred hhccCHHHHhcC
Confidence 999999999863
No 366
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1e-34 Score=276.29 Aligned_cols=255 Identities=24% Similarity=0.318 Sum_probs=192.2
Q ss_pred CCCccCccccccceeEEEEEEcC-CCCeeEEEEEEeeccC----ccchHHHHHHHHHHHcC-CCCCceeEeeeeeeeccC
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDH-DDHETLVAVKVLNLQH----RGASKSFIAECQALRSI-RHRNLVKIITSCVSVDFQ 233 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~-~~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 233 (484)
+|++.+.||+|+||.||+|+... ..++..||+|+++... ....+.+.+|++++.++ +|+||+++++++ .
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~-----~ 75 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAF-----Q 75 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEe-----e
Confidence 47888999999999999998532 2357889999987532 12335678899999999 699999998874 4
Q ss_pred CCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcc
Q 011508 234 GNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSD 313 (484)
Q Consensus 234 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~D 313 (484)
.+...++||||+++++|.+++... ..+++..+..++.|++.||+||| +.+++||||+|+||+++.++.+||+|
T Consensus 76 ~~~~~~lv~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~qi~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~d 148 (290)
T cd05613 76 TDTKLHLILDYINGGELFTHLSQR----ERFKEQEVQIYSGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTD 148 (290)
T ss_pred cCCeEEEEEecCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeEECCCCCEEEee
Confidence 455789999999999999999743 34788999999999999999999 89999999999999999999999999
Q ss_pred cCcccccccccccCCCCccccccccccccccCccccCCC--CCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHH
Q 011508 314 FGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGS--EVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFV 391 (484)
Q Consensus 314 fg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~--~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 391 (484)
||++....... ........|+..|+|||.+... .++.++||||||+++|+|++|+.||..... ......+.
T Consensus 149 fg~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~-~~~~~~~~ 221 (290)
T cd05613 149 FGLSKEFHEDE------VERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGE-KNSQAEIS 221 (290)
T ss_pred Cccceeccccc------ccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCc-cccHHHHH
Confidence 99987653321 1111234588899999987653 467899999999999999999999864211 11111111
Q ss_pred HhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCC-----CHHHHHHH
Q 011508 392 KEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERM-----NMEEVAAQ 462 (484)
Q Consensus 392 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~ 462 (484)
...... .+.. +..+...+.+++.+|++.||++|| +++++++.
T Consensus 222 ~~~~~~------~~~~-----------------------~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~ 268 (290)
T cd05613 222 RRILKS------EPPY-----------------------PQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH 268 (290)
T ss_pred HHhhcc------CCCC-----------------------CccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence 110000 0000 111245688999999999999997 67777653
No 367
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=8.7e-35 Score=275.49 Aligned_cols=271 Identities=23% Similarity=0.261 Sum_probs=194.5
Q ss_pred CCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC--ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCcee
Q 011508 161 FSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH--RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFE 238 (484)
Q Consensus 161 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 238 (484)
|+..+.||+|++|.||+|+.. .+++.+|+|++.... ....+.+.+|+.++++++|+|++++++++. .....
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~--~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----~~~~~ 73 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDK--KTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIH-----TERKL 73 (282)
T ss_pred CeeehcccccCcceEEEeeec--CCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhh-----cCCce
Confidence 566788999999999999944 457889999987653 333467889999999999999999999854 34588
Q ss_pred eEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccc
Q 011508 239 ALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAK 318 (484)
Q Consensus 239 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~ 318 (484)
++|+||++ ++|.+++.... ..+++..++.++.|++.||+||| +.+|+||||+|+||++++++.++|+|||.+.
T Consensus 74 ~~v~e~~~-~~l~~~i~~~~---~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~ 146 (282)
T cd07829 74 YLVFEYCD-MDLKKYLDKRP---GPLSPNLIKSIMYQLLRGLAYCH---SHRILHRDLKPQNILINRDGVLKLADFGLAR 146 (282)
T ss_pred EEEecCcC-cCHHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChheEEEcCCCCEEEecCCccc
Confidence 99999996 69999997542 35899999999999999999999 8999999999999999999999999999987
Q ss_pred ccccccccCCCCccccccccccccccCccccCCC-CCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhh---
Q 011508 319 FLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGS-EVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEA--- 394 (484)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~--- 394 (484)
....... ......++..|+|||.+.+. .++.++|||||||++||+++|+.||...... ..+.......
T Consensus 147 ~~~~~~~-------~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~ 218 (282)
T cd07829 147 AFGIPLR-------TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEI-DQLFKIFQILGTP 218 (282)
T ss_pred ccCCCcc-------ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHH-HHHHHHHHHhCCC
Confidence 6533221 11123456789999988766 7899999999999999999999998653211 0111111000
Q ss_pred cchhhhhhcCcc-cccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 395 LPERLAEIVDPV-LLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 395 ~~~~~~~~~d~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
.+.....+.+-. ......... ..............+.+++.+||+.||++||++.+++.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 219 TEESWPGVTKLPDYKPTFPKFP--------PKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred cHHHHHhhcccccccccccccC--------ccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 000011110000 000000000 00000000111557899999999999999999999975
No 368
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-36 Score=279.13 Aligned_cols=249 Identities=29% Similarity=0.350 Sum_probs=197.4
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
+.|+.-++||+|+||.||-+..++ +|+.+|.|.+.+.. +.......+|-.+|.+++.+.||.+-.. ++..
T Consensus 185 n~F~~~RvlGkGGFGEV~acqvra--TGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYA-----feTk 257 (591)
T KOG0986|consen 185 NTFRVYRVLGKGGFGEVCACQVRA--TGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYA-----FETK 257 (591)
T ss_pred cceeeeEEEecccccceeEEEEec--chhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeee-----ecCC
Confidence 567888999999999999998554 68899999886432 2334567889999999999999887655 5667
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
+..++|+..|.||+|.-+|.... ...+++..+..++.+|+.||++|| ..+||.|||||+|||+|+.|+++|+|+|
T Consensus 258 d~LClVLtlMNGGDLkfHiyn~g--~~gF~e~ra~FYAAEi~cGLehlH---~~~iVYRDLKPeNILLDd~GhvRISDLG 332 (591)
T KOG0986|consen 258 DALCLVLTLMNGGDLKFHIYNHG--NPGFDEQRARFYAAEIICGLEHLH---RRRIVYRDLKPENILLDDHGHVRISDLG 332 (591)
T ss_pred CceEEEEEeecCCceeEEeeccC--CCCCchHHHHHHHHHHHhhHHHHH---hcceeeccCChhheeeccCCCeEeeccc
Confidence 79999999999999988887543 356999999999999999999999 9999999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhc
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEAL 395 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 395 (484)
+|..+++.. .....+||.+|||||++.+..|+...|.||+||++|||+.|+.||.......
T Consensus 333 LAvei~~g~--------~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKv----------- 393 (591)
T KOG0986|consen 333 LAVEIPEGK--------PIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKV----------- 393 (591)
T ss_pred eEEecCCCC--------ccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhh-----------
Confidence 999775432 2223479999999999999999999999999999999999999996531110
Q ss_pred chhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHH
Q 011508 396 PERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNME 457 (484)
Q Consensus 396 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ 457 (484)
-.+-+|++...+.++ -++..+.+..++....|+.||.+|-.-.
T Consensus 394 ---k~eEvdrr~~~~~~e----------------y~~kFS~eakslc~~LL~Kdp~~RLGcr 436 (591)
T KOG0986|consen 394 ---KREEVDRRTLEDPEE----------------YSDKFSEEAKSLCEGLLTKDPEKRLGCR 436 (591)
T ss_pred ---hHHHHHHHHhcchhh----------------cccccCHHHHHHHHHHHccCHHHhccCC
Confidence 011222222221111 0233356778888889999999996443
No 369
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.7e-36 Score=275.49 Aligned_cols=264 Identities=23% Similarity=0.360 Sum_probs=203.3
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--c-----chHHHHHHHHHHHcCCCCCceeEeeeeeeec
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--G-----ASKSFIAECQALRSIRHRNLVKIITSCVSVD 231 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~-----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 231 (484)
++|-+.++||+|||+.||+|. +-...+.||+|+-..... + -.+...+|.++-+.|+||.||++|+++.
T Consensus 463 ~RYLlLhLLGrGGFSEVyKAF--Dl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfs--- 537 (775)
T KOG1151|consen 463 DRYLLLHLLGRGGFSEVYKAF--DLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFS--- 537 (775)
T ss_pred HHHHHHHHhccccHHHHHHhc--ccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeee---
Confidence 467888999999999999998 555678999998654321 1 1245678999999999999999999973
Q ss_pred cCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecC---CCc
Q 011508 232 FQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDG---ELT 308 (484)
Q Consensus 232 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~---~~~ 308 (484)
-+.+..|-|+|||+|.+|+-||+.++ .+++.++..|+.||+.||.||.+. +.+|+|-||||.|||+.. .|.
T Consensus 538 -lDtdsFCTVLEYceGNDLDFYLKQhk----lmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGe 611 (775)
T KOG1151|consen 538 -LDTDSFCTVLEYCEGNDLDFYLKQHK----LMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGE 611 (775)
T ss_pred -eccccceeeeeecCCCchhHHHHhhh----hhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccce
Confidence 34557899999999999999998544 489999999999999999999977 889999999999999943 478
Q ss_pred eEEcccCcccccccccccCCCCccccccccccccccCccccCC----CCCCcccceehhhHHHHHHHhCCCCCCCCccCC
Q 011508 309 AHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG----SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGN 384 (484)
Q Consensus 309 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~----~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~ 384 (484)
+||.|||++++++.+...............||++|++||++.- .+.+.|.||||+||++|..+.|+.||......
T Consensus 612 IKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQ- 690 (775)
T KOG1151|consen 612 IKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQ- 690 (775)
T ss_pred eEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhH-
Confidence 9999999999998776655555556667789999999997653 35788999999999999999999999753211
Q ss_pred ccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 385 LTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
.+..... .++...-...+ .-+....+...+|++||+..-++|....|+..
T Consensus 691 ---QdILqeN------TIlkAtEVqFP------------------~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~ 740 (775)
T KOG1151|consen 691 ---QDILQEN------TILKATEVQFP------------------PKPVVSSEAKAFIRRCLAYRKEDRIDVQQLAC 740 (775)
T ss_pred ---HHHHhhh------chhcceeccCC------------------CCCccCHHHHHHHHHHHHhhhhhhhhHHHHcc
Confidence 1111110 01110000000 01112556788999999999999988888764
No 370
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-36 Score=267.10 Aligned_cols=202 Identities=28% Similarity=0.369 Sum_probs=174.7
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCC
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQG 234 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 234 (484)
.++|...++||+|.||+|-+++ .+.+++.+|+|++++.- ......-..|-++|+..+||.+..+-.. |+.
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~r--EKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYs-----FQt 239 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCR--EKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYS-----FQT 239 (516)
T ss_pred cchhhHHHHhcCCccceEEEEe--ecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhh-----hcc
Confidence 4678899999999999999998 66688999999998653 2334556789999999999998877655 677
Q ss_pred CceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEccc
Q 011508 235 NDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDF 314 (484)
Q Consensus 235 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 314 (484)
++..|.||||..||.|.-+|.. .+.+++.....+-..|..||.||| +++||.||||.+|.++|.+|++||+||
T Consensus 240 ~drlCFVMeyanGGeLf~HLsr----er~FsE~RtRFYGaEIvsAL~YLH---s~~ivYRDlKLENLlLDkDGHIKitDF 312 (516)
T KOG0690|consen 240 QDRLCFVMEYANGGELFFHLSR----ERVFSEDRTRFYGAEIVSALGYLH---SRNIVYRDLKLENLLLDKDGHIKITDF 312 (516)
T ss_pred CceEEEEEEEccCceEeeehhh----hhcccchhhhhhhHHHHHHhhhhh---hCCeeeeechhhhheeccCCceEeeec
Confidence 7899999999999999888864 345888888888999999999999 999999999999999999999999999
Q ss_pred CcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCC
Q 011508 315 GLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEM 380 (484)
Q Consensus 315 g~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~ 380 (484)
|+++.-- ........++||+.|.|||++....|+.+.|.|.+|||+|||++|+.||...
T Consensus 313 GLCKE~I-------~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~ 371 (516)
T KOG0690|consen 313 GLCKEEI-------KYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNK 371 (516)
T ss_pred ccchhcc-------cccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCccccc
Confidence 9998532 2234455689999999999999999999999999999999999999999753
No 371
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=1.7e-35 Score=288.18 Aligned_cols=282 Identities=20% Similarity=0.242 Sum_probs=195.9
Q ss_pred HhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC--ccchHHHHHHHHHHHcCCCCCceeEeeeeeeecc-
Q 011508 156 KATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH--RGASKSFIAECQALRSIRHRNLVKIITSCVSVDF- 232 (484)
Q Consensus 156 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~- 232 (484)
...++|++.+.||+|++|.||+|+.. .++..||+|++.... ....+.+.+|+.++++++|+|++++++++...+.
T Consensus 12 ~~~~~y~~~~~ig~g~~g~vy~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 89 (343)
T cd07851 12 EVPDRYQNLSPVGSGAYGQVCSAFDT--KTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSL 89 (343)
T ss_pred cccCceEEEEEeccCCceEEEEEEEC--CCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccc
Confidence 45678999999999999999999954 356789999886432 2233567789999999999999999887543221
Q ss_pred CCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEc
Q 011508 233 QGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVS 312 (484)
Q Consensus 233 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~ 312 (484)
......++|+||+ +++|.+++.. ..+++..++.++.|++.||+||| +.+|+||||||+||++++++.++|+
T Consensus 90 ~~~~~~~lv~e~~-~~~L~~~~~~-----~~l~~~~~~~~~~ql~~aL~~LH---~~gi~H~dlkp~Nill~~~~~~kL~ 160 (343)
T cd07851 90 EDFQDVYLVTHLM-GADLNNIVKC-----QKLSDDHIQFLVYQILRGLKYIH---SAGIIHRDLKPSNIAVNEDCELKIL 160 (343)
T ss_pred cccccEEEEEecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEc
Confidence 2223479999999 7799998863 35899999999999999999999 8999999999999999999999999
Q ss_pred ccCcccccccccccCCCCccccccccccccccCccccCC-CCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHH
Q 011508 313 DFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFV 391 (484)
Q Consensus 313 Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 391 (484)
|||++...... .....++..|+|||.+.+ ..++.++|||||||++||+++|+.||...... ..+....
T Consensus 161 dfg~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~-~~~~~i~ 229 (343)
T cd07851 161 DFGLARHTDDE----------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHI-DQLKRIM 229 (343)
T ss_pred ccccccccccc----------ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHH
Confidence 99998765321 122357888999998755 46789999999999999999999999653211 0011110
Q ss_pred HhhcchhhhhhcCcccccccccccchhhhhhh-ccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 392 KEALPERLAEIVDPVLLVEREEGETSEANAHK-QRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 392 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
.........+..... .+............. .... .........+.+++.+|++.||++|||+.||++.
T Consensus 230 -~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h 298 (343)
T cd07851 230 -NLVGTPDEELLQKIS-SESARNYIQSLPQMPKKDFK-EVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH 298 (343)
T ss_pred -HhcCCCCHHHHhhcc-chhHHHHHHhccccCCCCHH-HHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence 000000000000000 000000000000000 0000 0001125678999999999999999999999763
No 372
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-35 Score=267.94 Aligned_cols=277 Identities=24% Similarity=0.377 Sum_probs=218.1
Q ss_pred HHhHHHhcCCCCccCccccccceeEEEEEEcCCCC---eeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeee
Q 011508 151 YQNLFKATDGFSLENLIGAGSFGSVYKGIFDHDDH---ETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITS 226 (484)
Q Consensus 151 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~---~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~ 226 (484)
.+++.....++++..++-+|.||.||.|.|++.++ .+.|-+|.++.... -....+..|--.+..+.|||+.++.+.
T Consensus 276 ~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V 355 (563)
T KOG1024|consen 276 LQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGV 355 (563)
T ss_pred HHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEE
Confidence 44555666788889999999999999998875433 23466676654332 233567888889999999999999999
Q ss_pred eeeeccCCCceeeEEeecccCCCHHHHHhhcC----CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCee
Q 011508 227 CVSVDFQGNDFEALVYELMVNGSLEEWLHLNR----DAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVL 302 (484)
Q Consensus 227 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~----~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIl 302 (484)
+.+ +....+.++.++.-|+|..|+...+ ...+.++..+...++.|++.|++||| ++++||.||..+|.+
T Consensus 356 ~ie----~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh---~~~ViHkDiAaRNCv 428 (563)
T KOG1024|consen 356 SIE----DYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLH---NHGVIHKDIAARNCV 428 (563)
T ss_pred Eee----ccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHH---hcCcccchhhhhcce
Confidence 854 4457789999999999999998433 23456888889999999999999999 999999999999999
Q ss_pred ecCCCceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCc
Q 011508 303 LDGELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMF 381 (484)
Q Consensus 303 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~ 381 (484)
+|+..++||+|=.+++.+-+.+...-++. ...+..||+||.+....|+.++|||||||+||||+| |+.|+.+..
T Consensus 429 Idd~LqVkltDsaLSRDLFP~DYhcLGDn-----EnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeID 503 (563)
T KOG1024|consen 429 IDDQLQVKLTDSALSRDLFPGDYHCLGDN-----ENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEID 503 (563)
T ss_pred ehhheeEEeccchhccccCcccccccCCC-----CCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccC
Confidence 99999999999999987755443322221 235788999999999999999999999999999999 999986532
Q ss_pred cCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 382 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
+. ....+.. | ..+-..+..|+++|..++.-||+.+|++||+.+|+..
T Consensus 504 Pf--Em~~ylk-----------d--------------------GyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~ 550 (563)
T KOG1024|consen 504 PF--EMEHYLK-----------D--------------------GYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVI 550 (563)
T ss_pred HH--HHHHHHh-----------c--------------------cceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHH
Confidence 11 1111111 1 1111226789999999999999999999999999999
Q ss_pred HHHHHHHHHhh
Q 011508 462 QLLSFRNKLVK 472 (484)
Q Consensus 462 ~L~~i~~~~~~ 472 (484)
-|.++-.++.+
T Consensus 551 cLseF~~qlt~ 561 (563)
T KOG1024|consen 551 CLSEFHTQLTR 561 (563)
T ss_pred HHHHHHHHHhh
Confidence 99999877653
No 373
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-35 Score=268.92 Aligned_cols=276 Identities=23% Similarity=0.312 Sum_probs=199.7
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCC-C-CC----ceeEeeeeeeec
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIR-H-RN----LVKIITSCVSVD 231 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h-~n----iv~~~~~~~~~~ 231 (484)
+.+|.+...+|+|.||.|-.+... ..+..||||+++.... -.+...-|+++|.++. + |+ ++.+.++
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~--~~~~~vAlKIik~V~k-YreAa~iEi~vLqki~~~DP~g~~rcv~m~~w----- 159 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDR--ETKEHVALKIIKNVDK-YREAALIEIEVLQKINESDPNGKFRCVQMRDW----- 159 (415)
T ss_pred ccceehhhhhcCCcccceEEEeec--CCCceehHHHHHHHHH-HhhHHHHHHHHHHHHHhcCCCCceEEEeeehh-----
Confidence 688999999999999999999843 3478999999975532 2345677999999993 2 22 6667676
Q ss_pred cCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecC------
Q 011508 232 FQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDG------ 305 (484)
Q Consensus 232 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~------ 305 (484)
|+..++.+||+|.+ |.|+.+++..+. -.+++...+..++.|++++++||| +.+++|-||||+|||+.+
T Consensus 160 FdyrghiCivfell-G~S~~dFlk~N~--y~~fpi~~ir~m~~QL~~sv~fLh---~~kl~HTDLKPENILfvss~~~~~ 233 (415)
T KOG0671|consen 160 FDYRGHICIVFELL-GLSTFDFLKENN--YIPFPIDHIRHMGYQLLESVAFLH---DLKLTHTDLKPENILFVSSEYFKT 233 (415)
T ss_pred hhccCceEEEEecc-ChhHHHHhccCC--ccccchHHHHHHHHHHHHHHHHHH---hcceeecCCChheEEEeccceEEE
Confidence 56667999999999 889999998544 345888999999999999999999 999999999999999931
Q ss_pred --------------CCceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHH
Q 011508 306 --------------ELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMF 371 (484)
Q Consensus 306 --------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ell 371 (484)
+..++++|||.|+.-.+.. ...+.|..|+|||++.+-.++.++||||+||||+|+.
T Consensus 234 ~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h----------s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~Ely 303 (415)
T KOG0671|consen 234 YNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH----------STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELY 303 (415)
T ss_pred eccCCccceeccCCCcceEEEecCCcceeccCc----------ceeeeccccCCchheeccCcCCccCceeeeeEEEEee
Confidence 3468999999998754332 3456899999999999999999999999999999999
Q ss_pred hCCCCCCCCccCC-ccHhHHHHhhcchh-hhhh-----cCc-ccccccccccc--------hhhhhhhccccccchhHHH
Q 011508 372 TGKGPTNEMFTGN-LTLHNFVKEALPER-LAEI-----VDP-VLLVEREEGET--------SEANAHKQRTRSFGGKECL 435 (484)
Q Consensus 372 tg~~p~~~~~~~~-~~~~~~~~~~~~~~-~~~~-----~d~-~l~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~ 435 (484)
||...|....+.+ ..+.+.+-+.+|.. +... ... .+.. ++.... ...+..... .......
T Consensus 304 tG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw-~e~~~~~~~k~v~~~ckpl~~~~---~~~d~e~ 379 (415)
T KOG0671|consen 304 TGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDW-PEVSSKGKSKYVFEPCKPLKKYM---LQDDLEH 379 (415)
T ss_pred ccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccC-ccccccccchhhhcCCccHHHHh---ccCcHHH
Confidence 9999987643221 11222222333332 1111 000 0000 000000 000000011 0123336
Q ss_pred HHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 436 VSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 436 ~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
.+|.+|+..||..||.+|+|+.|++.
T Consensus 380 ~~LfDLl~~mL~fDP~~RiTl~EAL~ 405 (415)
T KOG0671|consen 380 VQLFDLLRRMLEFDPARRITLREALS 405 (415)
T ss_pred hHHHHHHHHHHccCccccccHHHHhc
Confidence 78999999999999999999999875
No 374
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=1.8e-34 Score=268.25 Aligned_cols=237 Identities=30% Similarity=0.336 Sum_probs=187.5
Q ss_pred cccccceeEEEEEEcCCCCeeEEEEEEeeccCcc---chHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCceeeEEee
Q 011508 167 IGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRG---ASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFEALVYE 243 (484)
Q Consensus 167 lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 243 (484)
||+|+||.||++... .+++.+|+|++...... ....+..|+.++++++|+|++++++.+ ..+...++|||
T Consensus 1 lg~G~~~~v~~~~~~--~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~~v~e 73 (250)
T cd05123 1 LGKGSFGKVLLVRKK--DTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAF-----QTEEKLYLVLE 73 (250)
T ss_pred CCCCCceEEEEEEEC--CCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHe-----ecCCeeEEEEe
Confidence 699999999999854 35678999998754322 345788999999999999999999874 45668899999
Q ss_pred cccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcccccccc
Q 011508 244 LMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFLPEA 323 (484)
Q Consensus 244 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~~~~ 323 (484)
|+++++|.+++.... .+++..+..++.|++.|+.||| +.+++|+||+|+||+++.++.++|+|||.+......
T Consensus 74 ~~~~~~L~~~l~~~~----~l~~~~~~~~~~qi~~~l~~lh---~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~ 146 (250)
T cd05123 74 YAPGGELFSHLSKEG----RFSEERARFYAAEIVLALEYLH---SLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSE 146 (250)
T ss_pred cCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcceEEEcCCCcEEEeecCcceecccC
Confidence 999999999997432 4899999999999999999999 899999999999999999999999999998765332
Q ss_pred cccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchhhhhhc
Q 011508 324 ANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPERLAEIV 403 (484)
Q Consensus 324 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (484)
. .......++..|+|||...+...+.++|+||||+++|++++|+.||..... ...... +.
T Consensus 147 ~-------~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~-----~~~~~~--------~~ 206 (250)
T cd05123 147 G-------SRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR-----KEIYEK--------IL 206 (250)
T ss_pred C-------CcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-----HHHHHH--------Hh
Confidence 1 112234578899999999888889999999999999999999999965321 111111 11
Q ss_pred CcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHH
Q 011508 404 DPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEE 458 (484)
Q Consensus 404 d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~e 458 (484)
...+.. +...+..+.+++.+||..||++||++.+
T Consensus 207 ~~~~~~---------------------~~~~~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 207 KDPLRF---------------------PEFLSPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred cCCCCC---------------------CCCCCHHHHHHHHHHhcCCHhhCCCccc
Confidence 100000 1111456889999999999999999954
No 375
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=6.5e-37 Score=264.94 Aligned_cols=253 Identities=28% Similarity=0.319 Sum_probs=188.6
Q ss_pred cCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcC-CCCCceeEeeeeeeeccCCCceeeEE
Q 011508 164 ENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR-GASKSFIAECQALRSI-RHRNLVKIITSCVSVDFQGNDFEALV 241 (484)
Q Consensus 164 ~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~lv 241 (484)
...||.|+||+|++-. ++.+++..|||+++.... ...+++..|.+...+- +.||||+++|.++..+ ..|+.
T Consensus 69 lg~iG~G~fG~V~KM~--hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EG-----dcWiC 141 (361)
T KOG1006|consen 69 LGEIGNGAFGTVNKML--HKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEG-----DCWIC 141 (361)
T ss_pred HHHhcCCcchhhhhhh--cCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCC-----ceeee
Confidence 4679999999999987 677899999999986654 4456788888765544 8999999999974433 56999
Q ss_pred eecccCCCHHHHHhh-cCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccccc
Q 011508 242 YELMVNGSLEEWLHL-NRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFL 320 (484)
Q Consensus 242 ~e~~~~gsL~~~l~~-~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~ 320 (484)
||.| ..||+.+.+. +.-....+++...-.|......||.||-. ...|+|||+||+|||++..|.+||||||.+..+
T Consensus 142 MELM-d~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~--~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqL 218 (361)
T KOG1006|consen 142 MELM-DISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKE--ELKIIHRDVKPSNILLDRHGDVKLCDFGICGQL 218 (361)
T ss_pred HHHH-hhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHH--HhhhhhccCChhheEEecCCCEeeecccchHhH
Confidence 9999 6677765432 11223458888888889999999999987 689999999999999999999999999999876
Q ss_pred ccccccCCCCccccccccccccccCccccCCC--CCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchh
Q 011508 321 PEAANNLSSNQSSSVGVKGTVGYAAPEYGMGS--EVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPER 398 (484)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~--~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 398 (484)
..+. ....-.|-..|||||.+... .|+.+|||||+|++|+|+.||+.|+.....--..+.+.+
T Consensus 219 v~Si--------AkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv------- 283 (361)
T KOG1006|consen 219 VDSI--------AKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVV------- 283 (361)
T ss_pred HHHH--------HhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHH-------
Confidence 4332 11223588899999987653 488899999999999999999999875321101111111
Q ss_pred hhhhcCcc-cccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 399 LAEIVDPV-LLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 399 ~~~~~d~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
.-|+- +..+.+ ..+....+.+++..|+..|-..||...++.++
T Consensus 284 ---~gdpp~l~~~~~------------------~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 284 ---IGDPPILLFDKE------------------CVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred ---cCCCCeecCccc------------------ccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 11111 111110 11225678999999999999999999988653
No 376
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-34 Score=287.42 Aligned_cols=265 Identities=23% Similarity=0.287 Sum_probs=214.7
Q ss_pred HHhHHHhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcC-CCCCceeEeeeeee
Q 011508 151 YQNLFKATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSI-RHRNLVKIITSCVS 229 (484)
Q Consensus 151 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~ 229 (484)
++.+-..++-|++.+.||.|.+|.||+++. ..+++..|+|++..... ..++...|.++|+.+ .|||++.++|++..
T Consensus 11 ~~~lpdp~d~~ei~evig~Gtygkv~k~k~--~~~~~~aa~kI~~~~~d-~deEiE~eynil~~~~~hpnv~~fyg~~~k 87 (953)
T KOG0587|consen 11 LSSLPDPADIFEIIEVIGNGTYGKVYKGRH--VKTGQLAAIKIMDPTED-EEEEIELEYNMLKKYSHHPNVATFYGAFIK 87 (953)
T ss_pred hhhCCCCCCccEEEEEEeeccceeEEEEee--eecCceeeeEeecCCcc-ccHHHHHHHHHHHhccCCCCcceEEEEEEE
Confidence 344445677899999999999999999994 44677888888876544 346777889999888 79999999999998
Q ss_pred eccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCce
Q 011508 230 VDFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTA 309 (484)
Q Consensus 230 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~ 309 (484)
.+...++.+|+|||||.+||.-++++... +..+.|..+..|++.++.|+.+|| .+.++|||||-.|||++.++.+
T Consensus 88 ~~~~~~DqLWLVMEfC~gGSVTDLVKn~~--g~rl~E~~IaYI~re~lrgl~HLH---~nkviHRDikG~NiLLT~e~~V 162 (953)
T KOG0587|consen 88 KDPGNGDQLWLVMEFCGGGSVTDLVKNTK--GNRLKEEWIAYILREILRGLAHLH---NNKVIHRDIKGQNVLLTENAEV 162 (953)
T ss_pred ecCCCCCeEEEEeeccCCccHHHHHhhhc--ccchhhHHHHHHHHHHHHHHHHHh---hcceeeecccCceEEEeccCcE
Confidence 88888899999999999999999998655 567999999999999999999999 9999999999999999999999
Q ss_pred EEcccCcccccccccccCCCCccccccccccccccCccccCCC-----CCCcccceehhhHHHHHHHhCCCCCCCCccCC
Q 011508 310 HVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGS-----EVSTSGDVYSFGILLLEMFTGKGPTNEMFTGN 384 (484)
Q Consensus 310 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-----~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~ 384 (484)
||+|||.+..++.. ........||+.|||||++... .|+.++|+||+|++..||.-|.+|+.++....
T Consensus 163 KLvDFGvSaQldsT-------~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmr 235 (953)
T KOG0587|consen 163 KLVDFGVSAQLDST-------VGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMR 235 (953)
T ss_pred EEeeeeeeeeeecc-------cccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhh
Confidence 99999999876432 3334456799999999987653 47789999999999999999999987653211
Q ss_pred ccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 385 LTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
. .+. +..- +..+...+.....++.++|..||..|-.+||++.++++
T Consensus 236 a--------LF~--IpRN---------------------PPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 236 A--------LFL--IPRN---------------------PPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred h--------hcc--CCCC---------------------CCccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 0 000 0000 11111124444788999999999999999999999874
No 377
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7e-35 Score=282.01 Aligned_cols=242 Identities=25% Similarity=0.302 Sum_probs=191.0
Q ss_pred hcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcC-CCCCceeEeeeeeeeccCCC
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSI-RHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~ 235 (484)
.++.|.+...+|.|+|+.|-.+. +..+....++|++.... .+..+|+.++... +||||+++.+. +.++
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~--~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v-----~~~~ 388 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCE--SSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDV-----YEDG 388 (612)
T ss_pred cchhhccccccCCCCccceeeee--ccccccchhheeccccc----cccccccchhhhhcCCCcceeecce-----ecCC
Confidence 36778888999999999999988 55567789999997652 2334577666655 89999999998 4566
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeee-cCCCceEEccc
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLL-DGELTAHVSDF 314 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll-~~~~~~kl~Df 314 (484)
.+.++|||.+.++-+.+.+.... ....++..|+.+|+.|+.||| .++++||||||+|||+ ++.++++|+||
T Consensus 389 ~~~~~v~e~l~g~ell~ri~~~~-----~~~~e~~~w~~~lv~Av~~LH---~~gvvhRDLkp~NIL~~~~~g~lrltyF 460 (612)
T KOG0603|consen 389 KEIYLVMELLDGGELLRRIRSKP-----EFCSEASQWAAELVSAVDYLH---EQGVVHRDLKPGNILLDGSAGHLRLTYF 460 (612)
T ss_pred ceeeeeehhccccHHHHHHHhcc-----hhHHHHHHHHHHHHHHHHHHH---hcCeeecCCChhheeecCCCCcEEEEEe
Confidence 69999999999998877776332 222667789999999999999 8999999999999999 58899999999
Q ss_pred CcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhh
Q 011508 315 GLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEA 394 (484)
Q Consensus 315 g~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 394 (484)
|.++..... ....+-|..|.|||++....|++++|+||||++||+|++|+.||.....+ ..+...+
T Consensus 461 G~a~~~~~~----------~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~-~ei~~~i--- 526 (612)
T KOG0603|consen 461 GFWSELERS----------CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG-IEIHTRI--- 526 (612)
T ss_pred chhhhCchh----------hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch-HHHHHhh---
Confidence 999876433 22345788999999999999999999999999999999999999764333 1111111
Q ss_pred cchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 395 LPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 395 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
..+.. .+..+....+|+..||+.||.+||+|.|+...
T Consensus 527 --------~~~~~-----------------------s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h 563 (612)
T KOG0603|consen 527 --------QMPKF-----------------------SECVSDEAKDLLQQLLQVDPALRLGADEIGAH 563 (612)
T ss_pred --------cCCcc-----------------------ccccCHHHHHHHHHhccCChhhCcChhhhccC
Confidence 11100 01225677899999999999999999998764
No 378
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-35 Score=299.51 Aligned_cols=208 Identities=28% Similarity=0.374 Sum_probs=178.9
Q ss_pred HhHHHhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeec---cCccchHHHHHHHHHHHcCCCCCceeEeeeee
Q 011508 152 QNLFKATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNL---QHRGASKSFIAECQALRSIRHRNLVKIITSCV 228 (484)
Q Consensus 152 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~ 228 (484)
.++....++|.+.++||+|+||.|..++ ...+++.||+|++++ -.+.....|..|-.+|..-+.+=|+.+...
T Consensus 68 ~~lrl~~~DfeilKvIGrGaFGEV~lVr--~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyA-- 143 (1317)
T KOG0612|consen 68 KELRLKAEDFEILKVIGRGAFGEVALVR--HKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYA-- 143 (1317)
T ss_pred HHHhCCHHhhHHHHHhcccccceeEEEE--eeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHH--
Confidence 4445556789999999999999999998 455789999999976 335556778999999998888888887765
Q ss_pred eeccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCc
Q 011508 229 SVDFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELT 308 (484)
Q Consensus 229 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~ 308 (484)
|+++.+.|+|||||+||+|..++.... ++++..+..++..|.-||.-|| +.|+|||||||+|||+|..|+
T Consensus 144 ---FQD~~~LYlVMdY~pGGDlltLlSk~~----~~pE~~ArFY~aEiVlAldslH---~mgyVHRDiKPDNvLld~~GH 213 (1317)
T KOG0612|consen 144 ---FQDERYLYLVMDYMPGGDLLTLLSKFD----RLPEDWARFYTAEIVLALDSLH---SMGYVHRDIKPDNVLLDKSGH 213 (1317)
T ss_pred ---hcCccceEEEEecccCchHHHHHhhcC----CChHHHHHHHHHHHHHHHHHHH---hccceeccCCcceeEecccCc
Confidence 788899999999999999999997543 5888999999999999999999 899999999999999999999
Q ss_pred eEEcccCcccccccccccCCCCccccccccccccccCccccC----C-CCCCcccceehhhHHHHHHHhCCCCCCC
Q 011508 309 AHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGM----G-SEVSTSGDVYSFGILLLEMFTGKGPTNE 379 (484)
Q Consensus 309 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~----~-~~~~~~~Dvws~Gvvl~elltg~~p~~~ 379 (484)
+||+|||.+-.+..++ .-.+...+|||.|.+||++. + +.|++.+|.||+||++|||+.|..||..
T Consensus 214 ikLADFGsClkm~~dG------~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYa 283 (1317)
T KOG0612|consen 214 IKLADFGSCLKMDADG------TVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYA 283 (1317)
T ss_pred EeeccchhHHhcCCCC------cEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchH
Confidence 9999999998775443 22334567999999999865 2 6799999999999999999999999965
No 379
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=3.4e-34 Score=299.99 Aligned_cols=147 Identities=31% Similarity=0.454 Sum_probs=127.1
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc---cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR---GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
++|.+.+.||+|+||.||+|... .+++.||+|+++.... .....+..|+.++..++|+||+++++++. ..
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~--~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~-----~~ 76 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKK--NNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQ-----SA 76 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEEC--CCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEE-----EC
Confidence 57899999999999999999954 4578899999875432 22357888999999999999999998753 34
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
...++||||+.+++|.+++... ..+++..++.++.||+.||+||| .++|+||||||+|||++.++.+||+|||
T Consensus 77 ~~~~lVmEy~~g~~L~~li~~~----~~l~~~~~~~i~~qil~aL~yLH---~~gIiHrDLKP~NILl~~~g~vkL~DFG 149 (669)
T cd05610 77 NNVYLVMEYLIGGDVKSLLHIY----GYFDEEMAVKYISEVALALDYLH---RHGIIHRDLKPDNMLISNEGHIKLTDFG 149 (669)
T ss_pred CEEEEEEeCCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCccHHHEEEcCCCCEEEEeCC
Confidence 5889999999999999999743 24788999999999999999999 8899999999999999999999999999
Q ss_pred cccc
Q 011508 316 LAKF 319 (484)
Q Consensus 316 ~a~~ 319 (484)
+++.
T Consensus 150 ls~~ 153 (669)
T cd05610 150 LSKV 153 (669)
T ss_pred CCcc
Confidence 9863
No 380
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-35 Score=276.51 Aligned_cols=246 Identities=26% Similarity=0.380 Sum_probs=194.2
Q ss_pred cCccccccceeEEEEEEcCCCCeeEEEEEEeeccC--ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCceeeEE
Q 011508 164 ENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH--RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFEALV 241 (484)
Q Consensus 164 ~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv 241 (484)
.+.||+|.||+||-|+ +..+|+.||||++.+.. .....++.+|+.+|+++.||.||.+..- ++..+..++|
T Consensus 569 devLGSGQFG~VYgg~--hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M-----~ET~ervFVV 641 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGK--HRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECM-----FETPERVFVV 641 (888)
T ss_pred HhhccCCcceeeecce--ecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEe-----ecCCceEEEE
Confidence 3689999999999999 55578999999997644 2344789999999999999999998876 4556699999
Q ss_pred eecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCC---CceEEcccCccc
Q 011508 242 YELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGE---LTAHVSDFGLAK 318 (484)
Q Consensus 242 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~---~~~kl~Dfg~a~ 318 (484)
||.+ .|+..+.+-. .+..++++..-..++.||+.||.||| .++|+|+||||+|||+... .++||||||+|+
T Consensus 642 MEKl-~GDMLEMILS--sEkgRL~er~TkFlvtQIL~ALr~LH---~knIvHCDLKPENVLLas~~~FPQvKlCDFGfAR 715 (888)
T KOG4236|consen 642 MEKL-HGDMLEMILS--SEKGRLPERITKFLVTQILVALRYLH---FKNIVHCDLKPENVLLASASPFPQVKLCDFGFAR 715 (888)
T ss_pred ehhh-cchHHHHHHH--hhcccchHHHHHHHHHHHHHHHHHhh---hcceeeccCCchheeeccCCCCCceeecccccee
Confidence 9999 5666665542 23456888888889999999999999 8999999999999999643 389999999999
Q ss_pred ccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchh
Q 011508 319 FLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPER 398 (484)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 398 (484)
++.+. ......+||+.|.|||++....|...-|+||.||++|--++|..||.+. .++.+.++.+
T Consensus 716 iIgEk--------sFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEd----EdIndQIQNA---- 779 (888)
T KOG4236|consen 716 IIGEK--------SFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNED----EDINDQIQNA---- 779 (888)
T ss_pred ecchh--------hhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCc----cchhHHhhcc----
Confidence 88543 3334568999999999999999999999999999999999999999652 2222222211
Q ss_pred hhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 399 LAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 399 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
.+.. +. ..+.+...+.+++|...|+..-.+|-|.++-+..
T Consensus 780 -------aFMy--------------Pp---~PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh 819 (888)
T KOG4236|consen 780 -------AFMY--------------PP---NPWSEISPEAIDLINNLLQVKMRKRYSVDKSLSH 819 (888)
T ss_pred -------cccc--------------CC---CchhhcCHHHHHHHHHHHHHHHHHhcchHhhccc
Confidence 1111 00 0134446677889999999999999998876643
No 381
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=4.2e-34 Score=263.53 Aligned_cols=222 Identities=21% Similarity=0.177 Sum_probs=172.5
Q ss_pred ccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCceeeEEeecccCCC
Q 011508 170 GSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFEALVYELMVNGS 249 (484)
Q Consensus 170 G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gs 249 (484)
|.+|.||+++ +..+++.+|+|.+.... .+.+|...+....|||++++++++ ...+..++||||+++|+
T Consensus 4 g~~~~v~~~~--~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~lv~e~~~~~~ 71 (237)
T cd05576 4 GVIDKVLLVM--DTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYI-----VSEDSVFLVLQHAEGGK 71 (237)
T ss_pred cccceEEEEE--EccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhhe-----ecCCeEEEEEecCCCCC
Confidence 8899999998 44567889999986542 233455555666799999999984 34558899999999999
Q ss_pred HHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcccccccccccCCC
Q 011508 250 LEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFLPEAANNLSS 329 (484)
Q Consensus 250 L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 329 (484)
|.+++... ..+++..+..++.|++.||+||| +++++||||||+||+++.++.++++|||.+.......
T Consensus 72 L~~~l~~~----~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~----- 139 (237)
T cd05576 72 LWSHISKF----LNIPEECVKRWAAEMVVALDALH---REGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSC----- 139 (237)
T ss_pred HHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEEcCCCCEEEecccchhcccccc-----
Confidence 99998743 24899999999999999999999 8999999999999999999999999999876543211
Q ss_pred CccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchhhhhhcCccccc
Q 011508 330 NQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLV 409 (484)
Q Consensus 330 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 409 (484)
....++..|+|||...+..++.++||||+|+++|||++|+.|+...... ........+
T Consensus 140 -----~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~---------------~~~~~~~~~-- 197 (237)
T cd05576 140 -----DGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG---------------INTHTTLNI-- 197 (237)
T ss_pred -----ccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh---------------cccccccCC--
Confidence 1123567799999998888999999999999999999999886432110 000000000
Q ss_pred ccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHH
Q 011508 410 EREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEE 458 (484)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~e 458 (484)
+..+...+.+++.+|++.||++||++.+
T Consensus 198 ---------------------~~~~~~~~~~li~~~l~~dp~~R~~~~~ 225 (237)
T cd05576 198 ---------------------PEWVSEEARSLLQQLLQFNPTERLGAGV 225 (237)
T ss_pred ---------------------cccCCHHHHHHHHHHccCCHHHhcCCCc
Confidence 1112456889999999999999999743
No 382
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-34 Score=232.84 Aligned_cols=200 Identities=25% Similarity=0.403 Sum_probs=168.1
Q ss_pred CCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC--ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH--RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
+|.-.++||+|.||+||+|+ +..+.+.||+|.++.+. .+......+|+-+|+.++|.|||++++. ...+..
T Consensus 3 ~ydkmekigegtygtvfkar--n~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dv-----lhsdkk 75 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKAR--NRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV-----LHSDKK 75 (292)
T ss_pred chHHHHhhcCCcceeeEecc--cCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhh-----hccCce
Confidence 45566899999999999998 55678899999987654 3445678999999999999999999998 445567
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
..+|+||| ..+|..+.... ...++...+..++.|+++||.+.| ++++.||||||.|.++..+|+.|++|||++
T Consensus 76 ltlvfe~c-dqdlkkyfdsl---ng~~d~~~~rsfmlqllrgl~fch---shnvlhrdlkpqnllin~ngelkladfgla 148 (292)
T KOG0662|consen 76 LTLVFEFC-DQDLKKYFDSL---NGDLDPEIVRSFMLQLLRGLGFCH---SHNVLHRDLKPQNLLINRNGELKLADFGLA 148 (292)
T ss_pred eEEeHHHh-hHHHHHHHHhc---CCcCCHHHHHHHHHHHHhhhhhhh---hhhhhhccCCcceEEeccCCcEEecccchh
Confidence 89999999 56888888743 345889999999999999999999 999999999999999999999999999999
Q ss_pred cccccccccCCCCccccccccccccccCccccCCC-CCCcccceehhhHHHHHHHh-CCCCCCCC
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGS-EVSTSGDVYSFGILLLEMFT-GKGPTNEM 380 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dvws~Gvvl~ellt-g~~p~~~~ 380 (484)
+.+.-. .......+-|..|++|.++.+. -|+...|+||-||++.|+.. |++.|.+.
T Consensus 149 rafgip-------vrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~ 206 (292)
T KOG0662|consen 149 RAFGIP-------VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGN 206 (292)
T ss_pred hhcCCc-------eEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCC
Confidence 876322 2233344679999999998875 58999999999999999988 77667653
No 383
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9e-36 Score=255.92 Aligned_cols=283 Identities=20% Similarity=0.277 Sum_probs=200.6
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeec--cCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccC---
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNL--QHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQ--- 233 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~--- 233 (484)
..|.-..+||+|.||.||+|+ .+.+++.||+|++-. ...+......+|+++|..++|+|++.++..|....-.
T Consensus 17 ~~yek~~kigqGtfgeVFkAr--~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r 94 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKAR--SKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNR 94 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHh--hcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccc
Confidence 345666889999999999998 555677899886533 3345556788999999999999999999988664322
Q ss_pred CCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcc
Q 011508 234 GNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSD 313 (484)
Q Consensus 234 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~D 313 (484)
.....++||.+|+ -+|..++.. ...+++..++.++..++..||.|+| ...|+|||+|+.|+|++.++.+||+|
T Consensus 95 ~r~t~ylVf~~ce-hDLaGlLsn---~~vr~sls~Ikk~Mk~Lm~GL~~iH---r~kilHRDmKaaNvLIt~dgilklAD 167 (376)
T KOG0669|consen 95 DRATFYLVFDFCE-HDLAGLLSN---RKVRFSLSEIKKVMKGLMNGLYYIH---RNKILHRDMKAANVLITKDGILKLAD 167 (376)
T ss_pred ccceeeeeHHHhh-hhHHHHhcC---ccccccHHHHHHHHHHHHHHHHHHH---HhhHHhhcccHhhEEEcCCceEEeec
Confidence 2234789999994 588888862 3356899999999999999999999 99999999999999999999999999
Q ss_pred cCcccccccccccCCCCccccccccccccccCccccCC-CCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHH
Q 011508 314 FGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVK 392 (484)
Q Consensus 314 fg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 392 (484)
||+++.+....+... +.....+-|..|++||.+.+ ..|+++.|||.-||++.||+||.+-+.+... ......+.
T Consensus 168 FGlar~fs~~~n~~k---prytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnte--qqql~~Is 242 (376)
T KOG0669|consen 168 FGLARAFSTSKNVVK---PRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTE--QQQLHLIS 242 (376)
T ss_pred cccccceecccccCC---CCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChH--HHHHHHHH
Confidence 999987755443221 22345567999999998766 6799999999999999999999988765322 11112222
Q ss_pred hhc----chhhhhhcCcccccccccccchhhh------hhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 393 EAL----PERLAEIVDPVLLVEREEGETSEAN------AHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 393 ~~~----~~~~~~~~d~~l~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
... ++-+..+..-.+....+..+..... ..++..+ .++..+|+..++..||.+|+++.+++..
T Consensus 243 ~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~k-------d~~a~dLle~ll~~DP~kR~~ad~alnh 315 (376)
T KOG0669|consen 243 QLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVK-------DDEALDLLEKLLKLDPTKRIDADQALNH 315 (376)
T ss_pred HHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccC-------ChhHHHHHHHHhccCcccCcchHhhhch
Confidence 111 1111111111111100000000000 0011111 3467889999999999999999999854
No 384
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-34 Score=263.94 Aligned_cols=202 Identities=28% Similarity=0.357 Sum_probs=170.4
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcC-CCCCceeEeeeeeeeccC
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSI-RHRNLVKIITSCVSVDFQ 233 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 233 (484)
..+|....+||+|+||.|-+|. .+++...+|||+++++- ..+.+--+.|-++|..- +-|.++++..+ ++
T Consensus 348 ~tDFnFl~VlGKGSFGKVlLae--rkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHSc-----FQ 420 (683)
T KOG0696|consen 348 ATDFNFLMVLGKGSFGKVLLAE--RKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSC-----FQ 420 (683)
T ss_pred ecccceEEEeccCccceeeeec--ccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHH-----hh
Confidence 3468899999999999999998 56678899999998643 23334455677777766 56778888776 55
Q ss_pred CCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcc
Q 011508 234 GNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSD 313 (484)
Q Consensus 234 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~D 313 (484)
.-+..|.||||+.||+|--.+++.. .+.+..+.-++..|+-||-+|| +++|+.||||.+||++|.+|++||+|
T Consensus 421 TmDRLyFVMEyvnGGDLMyhiQQ~G----kFKEp~AvFYAaEiaigLFFLh---~kgIiYRDLKLDNvmLd~eGHiKi~D 493 (683)
T KOG0696|consen 421 TMDRLYFVMEYVNGGDLMYHIQQVG----KFKEPVAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIAD 493 (683)
T ss_pred hhhheeeEEEEecCchhhhHHHHhc----ccCCchhhhhhHHHHHHhhhhh---cCCeeeeeccccceEeccCCceEeee
Confidence 5569999999999999998887544 3677788889999999999999 99999999999999999999999999
Q ss_pred cCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCC
Q 011508 314 FGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEM 380 (484)
Q Consensus 314 fg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~ 380 (484)
||+++.-- .........+||+.|+|||++...+|+...|.|||||+||||+.|++||++.
T Consensus 494 FGmcKEni-------~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGe 553 (683)
T KOG0696|consen 494 FGMCKENI-------FDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGE 553 (683)
T ss_pred cccccccc-------cCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCC
Confidence 99997431 2234455689999999999999999999999999999999999999999874
No 385
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=2.8e-33 Score=285.89 Aligned_cols=274 Identities=20% Similarity=0.185 Sum_probs=170.0
Q ss_pred hcCCCCccCccccccceeEEEEEEcCC--CCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeec-cC
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHD--DHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVD-FQ 233 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~ 233 (484)
..++|++.+.||+|+||.||+|++..+ ..+..||+|++.... ..+....+ .+....+.++..++..+.... ..
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~--~~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYG--AVEIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccc--hhHHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 567899999999999999999996532 116789999875432 11222211 122222333333222211111 13
Q ss_pred CCceeeEEeecccCCCHHHHHhhcCCC----------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCC
Q 011508 234 GNDFEALVYELMVNGSLEEWLHLNRDA----------------PRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLK 297 (484)
Q Consensus 234 ~~~~~~lv~e~~~~gsL~~~l~~~~~~----------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk 297 (484)
.+...++|+||+++++|.+++...... ........+..++.|++.||+||| +++|+|||||
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH---~~gIiHRDLK 282 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLH---STGIVHRDVK 282 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHH---HCCEEeCcCC
Confidence 456789999999999999998743210 001123445679999999999999 8999999999
Q ss_pred CCCeeecC-CCceEEcccCcccccccccccCCCCccccccccccccccCccccCCC----------------------CC
Q 011508 298 PSNVLLDG-ELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGS----------------------EV 354 (484)
Q Consensus 298 ~~NIll~~-~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~----------------------~~ 354 (484)
|+|||++. ++.+||+|||+++.+..... .......+++.|+|||.+... .+
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~~~~------~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~ 356 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRVGIN------YIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNL 356 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCccccccccc------cCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccC
Confidence 99999986 57999999999986533221 112235688999999964322 23
Q ss_pred CcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcc-----hhhhhhcCcccccccccccchhhhhhhcccccc
Q 011508 355 STSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALP-----ERLAEIVDPVLLVEREEGETSEANAHKQRTRSF 429 (484)
Q Consensus 355 ~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~-----~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~ 429 (484)
+.++|||||||++|||+++..+++.. +..+...... ..+...+.+....+... ....
T Consensus 357 ~~k~DVwSlGviL~el~~~~~~~~~~------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~- 418 (566)
T PLN03225 357 PDRFDIYSAGLIFLQMAFPNLRSDSN------LIQFNRQLKRNDYDLVAWRKLVEPRASPDLRR-----------GFEV- 418 (566)
T ss_pred CCCcccHHHHHHHHHHHhCcCCCchH------HHHHHHHHHhcCCcHHHHHHhhccccchhhhh-----------hhhh-
Confidence 45679999999999999987665431 1111110000 00111111110000000 0000
Q ss_pred chhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 430 GGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 430 ~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
.........+|+.+||+.||++|||++|+++.
T Consensus 419 -~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~H 450 (566)
T PLN03225 419 -LDLDGGAGWELLKSMMRFKGRQRISAKAALAH 450 (566)
T ss_pred -ccccchHHHHHHHHHccCCcccCCCHHHHhCC
Confidence 00012345689999999999999999999864
No 386
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-34 Score=237.37 Aligned_cols=221 Identities=24% Similarity=0.290 Sum_probs=176.8
Q ss_pred HHHhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcC-CCCCceeEeeeeeeec
Q 011508 154 LFKATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR-GASKSFIAECQALRSI-RHRNLVKIITSCVSVD 231 (484)
Q Consensus 154 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~ 231 (484)
+....+...-+..||+|++|.|-+-+ +..++...|+|.+...-. ...++..+|+.+..+. .+|.+|.++|..
T Consensus 41 ~eV~ad~L~~i~elGrGayG~vekmr--h~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~---- 114 (282)
T KOG0984|consen 41 FEVPADDLVGIEELGRGAYGVVEKMR--HIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGAL---- 114 (282)
T ss_pred cccchhhhhhhhhhcCCccchhhhee--eccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhh----
Confidence 44445555667789999999998776 666789999999975543 3346778888877665 799999999974
Q ss_pred cCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEE
Q 011508 232 FQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHV 311 (484)
Q Consensus 232 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl 311 (484)
..+...++.||.| ..||+.+-++--+.+..+++..+-+|+..+..||.|||+ ...++|||+||+|||++.+|++|+
T Consensus 115 -~regdvwIcME~M-~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~--kL~vIHRDvKPsNiLIn~~GqVKi 190 (282)
T KOG0984|consen 115 -FREGDVWICMELM-DTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHS--KLSVIHRDVKPSNILINYDGQVKI 190 (282)
T ss_pred -hccccEEEeHHHh-hhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHH--HhhhhhccCCcceEEEccCCcEEE
Confidence 4445789999999 679988877666667789999999999999999999997 789999999999999999999999
Q ss_pred cccCcccccccccccCCCCccccccccccccccCccccCC----CCCCcccceehhhHHHHHHHhCCCCCCCCccCCccH
Q 011508 312 SDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG----SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTL 387 (484)
Q Consensus 312 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~----~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~ 387 (484)
||||.+..+.++... .-..|-..|+|||.+.. ..|+-|+||||+|+++.||.+++.||+.....-..+
T Consensus 191 CDFGIsG~L~dSiAk--------t~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qL 262 (282)
T KOG0984|consen 191 CDFGISGYLVDSIAK--------TMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQL 262 (282)
T ss_pred cccccceeehhhhHH--------HHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHH
Confidence 999999877443211 11347788999998654 468999999999999999999999998765544444
Q ss_pred hHHHH
Q 011508 388 HNFVK 392 (484)
Q Consensus 388 ~~~~~ 392 (484)
.+.+.
T Consensus 263 kqvVe 267 (282)
T KOG0984|consen 263 KQVVE 267 (282)
T ss_pred HHHhc
Confidence 44433
No 387
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=100.00 E-value=7.8e-33 Score=275.53 Aligned_cols=214 Identities=21% Similarity=0.304 Sum_probs=155.7
Q ss_pred hcCCCCccCccccccceeEEEEEEcC--------------CCCeeEEEEEEeeccCccchHH--------------HHHH
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDH--------------DDHETLVAVKVLNLQHRGASKS--------------FIAE 208 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~--------------~~~~~~vavK~~~~~~~~~~~~--------------~~~e 208 (484)
..++|++.++||+|+||.||+|.... ...++.||||++........++ ...|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 35789999999999999999997421 2234679999987543322223 3446
Q ss_pred HHHHHcCCCCCc-----eeEeeeeeeec---cCCCceeeEEeecccCCCHHHHHhhcCC--------------------C
Q 011508 209 CQALRSIRHRNL-----VKIITSCVSVD---FQGNDFEALVYELMVNGSLEEWLHLNRD--------------------A 260 (484)
Q Consensus 209 ~~~l~~l~h~ni-----v~~~~~~~~~~---~~~~~~~~lv~e~~~~gsL~~~l~~~~~--------------------~ 260 (484)
+.++.+++|.++ ++++++|.... .......++||||+++++|.++++.... .
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777777766654 66777765421 1123467999999999999999874221 0
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcccccccccccCCCCcccccccccc
Q 011508 261 PRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGT 340 (484)
Q Consensus 261 ~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~ 340 (484)
...+++..+..++.|++.+|.||| +.+|+||||||+||+++.++.+||+|||++........ .......++
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH---~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~------~~~~~g~~t 373 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLH---RIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGIN------FNPLYGMLD 373 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCc------cCccccCCC
Confidence 123567888999999999999999 88999999999999999999999999999875432211 111112357
Q ss_pred ccccCccccCCCC--------------------C--CcccceehhhHHHHHHHhCCC-CCCC
Q 011508 341 VGYAAPEYGMGSE--------------------V--STSGDVYSFGILLLEMFTGKG-PTNE 379 (484)
Q Consensus 341 ~~y~aPE~~~~~~--------------------~--~~~~Dvws~Gvvl~elltg~~-p~~~ 379 (484)
+.|+|||.+.... + ..+.||||+||++++|++|.. ||..
T Consensus 374 p~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~ 435 (507)
T PLN03224 374 PRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVAN 435 (507)
T ss_pred cceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccc
Confidence 8999999865432 1 134799999999999999875 6643
No 388
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-33 Score=279.66 Aligned_cols=265 Identities=28% Similarity=0.379 Sum_probs=196.7
Q ss_pred CCccCcccccccee-EEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcC-CCCCceeEeeeeeeeccCCCcee
Q 011508 161 FSLENLIGAGSFGS-VYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSI-RHRNLVKIITSCVSVDFQGNDFE 238 (484)
Q Consensus 161 ~~~~~~lg~G~~g~-Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~ 238 (484)
|.-.+.+|.|+.|+ ||+|.+. ++.||||++-.. ...-..+|+..|+.- +|||||++++. .++..+.
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~ye----~R~VAVKrll~e---~~~~A~rEi~lL~eSD~H~NviRyyc~-----E~d~qF~ 578 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVYE----GREVAVKRLLEE---FFDFAQREIQLLQESDEHPNVIRYYCS-----EQDRQFL 578 (903)
T ss_pred eccHHHcccCCCCcEEEEEeeC----CceehHHHHhhH---hHHHHHHHHHHHHhccCCCceEEEEee-----ccCCceE
Confidence 34446789998875 6999976 678999987532 335667999999988 79999999877 5667799
Q ss_pred eEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecC---C--CceEEcc
Q 011508 239 ALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDG---E--LTAHVSD 313 (484)
Q Consensus 239 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~---~--~~~kl~D 313 (484)
||..|.| ..+|.+++...............+.+..|++.||++|| +.+||||||||.||||+. + ..++|+|
T Consensus 579 YIalELC-~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLH---sl~iVHRDLkPQNILI~~~~~~~~~ra~iSD 654 (903)
T KOG1027|consen 579 YIALELC-ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLH---SLKIVHRDLKPQNILISVPSADGTLRAKISD 654 (903)
T ss_pred EEEehHh-hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHH---hcccccccCCCceEEEEccCCCcceeEEecc
Confidence 9999999 67999999863111111222455778899999999999 899999999999999975 2 4899999
Q ss_pred cCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHH
Q 011508 314 FGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVK 392 (484)
Q Consensus 314 fg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~ 392 (484)
||+++.+........ ......||-+|+|||++....-+.++||||+|||+|+.++ |.+||.+....+..+. .
T Consensus 655 fglsKkl~~~~sS~~----r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl---~ 727 (903)
T KOG1027|consen 655 FGLSKKLAGGKSSFS----RLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANIL---T 727 (903)
T ss_pred cccccccCCCcchhh----cccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhh---c
Confidence 999999866543322 2345679999999999999888889999999999999999 5999987432211110 0
Q ss_pred hhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHH------------
Q 011508 393 EALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVA------------ 460 (484)
Q Consensus 393 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl------------ 460 (484)
.. ..+. .+. ...+| +..+||.+|++++|..||++.+|+
T Consensus 728 ~~-----~~L~--~L~---------------------~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW~~ekrL 777 (903)
T KOG1027|consen 728 GN-----YTLV--HLE---------------------PLPDC--EAKDLISRMLNPDPQLRPSATDVLNHPLFWDSEKRL 777 (903)
T ss_pred Cc-----ccee--eec---------------------cCchH--HHHHHHHHhcCCCcccCCCHHHHhCCCccCChHHHH
Confidence 00 0000 000 01222 678999999999999999999997
Q ss_pred HHHHHHHHHHhhccCCCc
Q 011508 461 AQLLSFRNKLVKNVRGQP 478 (484)
Q Consensus 461 ~~L~~i~~~~~~~~~~~~ 478 (484)
+.|++..++.....+..|
T Consensus 778 ~Fl~dvSDRvE~e~r~~~ 795 (903)
T KOG1027|consen 778 SFLRDVSDRVEKENRDSP 795 (903)
T ss_pred HHHHhhhhhhhhhhccCc
Confidence 456666666665555544
No 389
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=100.00 E-value=2.1e-32 Score=252.83 Aligned_cols=239 Identities=29% Similarity=0.359 Sum_probs=187.8
Q ss_pred cceeEEEEEEcCCCCeeEEEEEEeeccCccc-hHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCceeeEEeecccCCC
Q 011508 171 SFGSVYKGIFDHDDHETLVAVKVLNLQHRGA-SKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFEALVYELMVNGS 249 (484)
Q Consensus 171 ~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gs 249 (484)
+||.||+|+... ++..+|+|++....... .+.+.+|++.+++++|+|++++++++.. ....++++||+++++
T Consensus 1 ~~g~v~~~~~~~--~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~-----~~~~~l~~e~~~~~~ 73 (244)
T smart00220 1 SFGKVYLARDKK--TGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFED-----EDKLYLVMEYCDGGD 73 (244)
T ss_pred CceEEEEEEECC--CCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheee-----CCEEEEEEeCCCCCC
Confidence 589999999643 46789999997665444 6789999999999999999999998643 347899999999999
Q ss_pred HHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcccccccccccCCC
Q 011508 250 LEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFLPEAANNLSS 329 (484)
Q Consensus 250 L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~ 329 (484)
|.+++.... .+++..++.++.+++.++.+|| ..+++|+||+|+||++++++.++|+|||.+.......
T Consensus 74 L~~~~~~~~----~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~----- 141 (244)
T smart00220 74 LFDLLKKRG----RLSEDEARFYARQILSALEYLH---SNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG----- 141 (244)
T ss_pred HHHHHHhcc----CCCHHHHHHHHHHHHHHHHHHH---HcCeecCCcCHHHeEECCCCcEEEccccceeeecccc-----
Confidence 999987432 2889999999999999999999 8899999999999999999999999999998764331
Q ss_pred CccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchhhhhhcCccccc
Q 011508 330 NQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLV 409 (484)
Q Consensus 330 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 409 (484)
......++..|+|||......++.++||||||++++++++|..||....... ...+... ......
T Consensus 142 ---~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~-~~~~~~~-----------~~~~~~ 206 (244)
T smart00220 142 ---LLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLL-ELFKKIG-----------KPKPPF 206 (244)
T ss_pred ---ccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHh-----------ccCCCC
Confidence 1123457889999999988888999999999999999999999986531110 1111100 000000
Q ss_pred ccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 410 EREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
... ...+..++.+++.+|+..+|++||++.++++
T Consensus 207 ~~~------------------~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 207 PPP------------------EWKISPEAKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred ccc------------------cccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence 000 0002567899999999999999999999986
No 390
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=1.8e-32 Score=244.67 Aligned_cols=202 Identities=27% Similarity=0.356 Sum_probs=172.8
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc---cchHHHHHHHHHHHcC-CCCCceeEeeeeeeeccCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR---GASKSFIAECQALRSI-RHRNLVKIITSCVSVDFQG 234 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 234 (484)
.+|.+..+||+|+|++|..+++. .+.+.+|+|++++... .+..-.+.|..+..+- +||.+|.+..+ |+.
T Consensus 250 ~df~ll~vigrgsyakvl~~~~~--~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhsc-----fqt 322 (593)
T KOG0695|consen 250 QDFDLLRVIGRGSYAKVLLVRLK--KTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSC-----FQT 322 (593)
T ss_pred ccceeeeeecCcchhhhhheehc--ccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhh-----hcc
Confidence 56899999999999999999844 4678999999986532 3334466777777766 79999999887 667
Q ss_pred CceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEccc
Q 011508 235 NDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDF 314 (484)
Q Consensus 235 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 314 (484)
+...++|.||++||+|--+++.. +.+++..+..+...|.-||.||| ++||+.||||.+|+|+|..|++||.|+
T Consensus 323 esrlffvieyv~ggdlmfhmqrq----rklpeeharfys~ei~lal~flh---~rgiiyrdlkldnvlldaeghikltdy 395 (593)
T KOG0695|consen 323 ESRLFFVIEYVNGGDLMFHMQRQ----RKLPEEHARFYSAEICLALNFLH---ERGIIYRDLKLDNVLLDAEGHIKLTDY 395 (593)
T ss_pred cceEEEEEEEecCcceeeehhhh----hcCcHHHhhhhhHHHHHHHHHHh---hcCeeeeeccccceEEccCCceeeccc
Confidence 77999999999999998777643 35899999999999999999999 999999999999999999999999999
Q ss_pred CcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCc
Q 011508 315 GLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMF 381 (484)
Q Consensus 315 g~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~ 381 (484)
|+++.-- ........++||+.|.|||++.+..|+...|.|++||+++||+.|+.||+-..
T Consensus 396 gmcke~l-------~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivg 455 (593)
T KOG0695|consen 396 GMCKEGL-------GPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVG 455 (593)
T ss_pred chhhcCC-------CCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceec
Confidence 9998532 22344556899999999999999999999999999999999999999997543
No 391
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=1.2e-31 Score=250.58 Aligned_cols=137 Identities=26% Similarity=0.448 Sum_probs=117.4
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCC-----C---CCceeEeeeeee
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIR-----H---RNLVKIITSCVS 229 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----h---~niv~~~~~~~~ 229 (484)
.++|.+.++||-|.|++||++. +....+.||+|+.+... .-.+....|+++|++++ | .+||++++.|..
T Consensus 77 ~gRY~v~rKLGWGHFSTVWLaw--Dtq~~r~VAlKVvKSAq-hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fkh 153 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFSTVWLAW--DTQNKRYVALKVVKSAQ-HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKH 153 (590)
T ss_pred CceEEEEEeccccccceeEEEe--eccCCeEEEEEEEehhh-HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeecccee
Confidence 3689999999999999999998 66778999999987442 23466789999999983 3 359999999876
Q ss_pred eccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeee
Q 011508 230 VDFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLL 303 (484)
Q Consensus 230 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll 303 (484)
.+ .++.+.++|+|++ |-+|..+|.... -+.++...+..|++||+.||.|||. ..+|||-||||+|||+
T Consensus 154 sG-pNG~HVCMVfEvL-GdnLLklI~~s~--YrGlpl~~VK~I~~qvL~GLdYLH~--ecgIIHTDlKPENvLl 221 (590)
T KOG1290|consen 154 SG-PNGQHVCMVFEVL-GDNLLKLIKYSN--YRGLPLSCVKEICRQVLTGLDYLHR--ECGIIHTDLKPENVLL 221 (590)
T ss_pred cC-CCCcEEEEEehhh-hhHHHHHHHHhC--CCCCcHHHHHHHHHHHHHHHHHHHH--hcCccccCCCcceeee
Confidence 65 6778999999999 889999998543 4568999999999999999999998 6799999999999999
No 392
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.97 E-value=7.3e-33 Score=234.83 Aligned_cols=277 Identities=19% Similarity=0.265 Sum_probs=198.8
Q ss_pred HhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCC-CCCceeEeeeeeeeccCC
Q 011508 156 KATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIR-HRNLVKIITSCVSVDFQG 234 (484)
Q Consensus 156 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~ 234 (484)
...++|++.+++|+|.++.||.|. +-.+...++||+++... .+.+.+|+.+|..|. ||||+++++...+. .
T Consensus 35 g~~ddYeivrk~GRGKYSEVFeg~--~~~~~eK~ViKiLKPVk---kkKIkREikIL~nL~gg~NIi~L~DiV~Dp---~ 106 (338)
T KOG0668|consen 35 GNQDDYEIVRKVGRGKYSEVFEGI--NITNNEKCVIKILKPVK---KKKIKREIKILQNLRGGPNIIKLLDIVKDP---E 106 (338)
T ss_pred cccchHHHHHHHcCccHhhHhccc--ccCCCceEEEeeechHH---HHHHHHHHHHHHhccCCCCeeehhhhhcCc---c
Confidence 455789999999999999999998 44456789999997543 367889999999996 99999999985433 2
Q ss_pred CceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCC-CceEEcc
Q 011508 235 NDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGE-LTAHVSD 313 (484)
Q Consensus 235 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~-~~~kl~D 313 (484)
.....+|+||+.+.+...+.. .++..++...+.+++.||.|+| +.||+|||+||.|+++|.. -..+|+|
T Consensus 107 SktpaLiFE~v~n~Dfk~ly~-------tl~d~dIryY~~elLkALdyCH---S~GImHRDVKPhNvmIdh~~rkLrlID 176 (338)
T KOG0668|consen 107 SKTPSLIFEYVNNTDFKQLYP-------TLTDYDIRYYIYELLKALDYCH---SMGIMHRDVKPHNVMIDHELRKLRLID 176 (338)
T ss_pred ccCchhHhhhhccccHHHHhh-------hhchhhHHHHHHHHHHHHhHHH---hcCcccccCCcceeeechhhceeeeee
Confidence 445679999999888776553 4777889999999999999999 9999999999999999865 4899999
Q ss_pred cCcccccccccccCCCCccccccccccccccCccccCC-CCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHH
Q 011508 314 FGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVK 392 (484)
Q Consensus 314 fg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 392 (484)
+|+|.++.... .....+.+..|.-||.+-. ..|+..-|+|||||++..|+..+.||....+....+.+.+.
T Consensus 177 WGLAEFYHp~~--------eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIak 248 (338)
T KOG0668|consen 177 WGLAEFYHPGK--------EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAK 248 (338)
T ss_pred cchHhhcCCCc--------eeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHH
Confidence 99998874322 1122346677889998765 56888999999999999999999998654433333443333
Q ss_pred hhcchhhhhh-------cCccccccccc-ccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 393 EALPERLAEI-------VDPVLLVEREE-GETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 393 ~~~~~~~~~~-------~d~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
-.-.+.+... +|+.+..--.. .......+..+..+.. ..++.++++...|..|-++|||++|.++.
T Consensus 249 VLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl----~~peaiDlldklLrYDHqeRlTakEam~H 322 (338)
T KOG0668|consen 249 VLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHL----VSPEAIDLLDKLLRYDHQERLTAKEAMAH 322 (338)
T ss_pred HhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCcccccc----CChHHHHHHHHHHhhccccccchHHHhcC
Confidence 2222221111 22221110000 0000000001111111 14678899999999999999999998864
No 393
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=4.3e-33 Score=261.00 Aligned_cols=199 Identities=25% Similarity=0.381 Sum_probs=172.6
Q ss_pred CCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCc
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
++..+..||-|+||.|-++...+. ...+|+|++++.. ....+....|-.+|...+.|.||++|.. |.++.
T Consensus 421 dl~~iaTLGvGgFGRVELV~~~~~--~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrT-----frd~k 493 (732)
T KOG0614|consen 421 DLKRIATLGVGGFGRVELVKVNSQ--KATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRT-----FRDSK 493 (732)
T ss_pred hhhhhhhcccCccceEEEEEeccc--chHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHH-----hccch
Confidence 456677899999999999986532 2358888887543 3445678899999999999999999987 67788
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCc
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGL 316 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 316 (484)
+.|+.||-|-||.|...++... .++......++..+.+|++||| +++||.|||||+|.+++.+|-+||.|||+
T Consensus 494 yvYmLmEaClGGElWTiLrdRg----~Fdd~tarF~~acv~EAfeYLH---~k~iIYRDLKPENllLd~~Gy~KLVDFGF 566 (732)
T KOG0614|consen 494 YVYMLMEACLGGELWTILRDRG----SFDDYTARFYVACVLEAFEYLH---RKGIIYRDLKPENLLLDNRGYLKLVDFGF 566 (732)
T ss_pred hhhhhHHhhcCchhhhhhhhcC----CcccchhhhhHHHHHHHHHHHH---hcCceeccCChhheeeccCCceEEeehhh
Confidence 9999999999999999997443 4778888889999999999999 99999999999999999999999999999
Q ss_pred ccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCC
Q 011508 317 AKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEM 380 (484)
Q Consensus 317 a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~ 380 (484)
|+.+.. ...+..++||+.|.|||++.....+.++|.||+|+++|||++|.+||.+.
T Consensus 567 AKki~~--------g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~ 622 (732)
T KOG0614|consen 567 AKKIGS--------GRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGV 622 (732)
T ss_pred HHHhcc--------CCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCC
Confidence 998732 34556789999999999999999999999999999999999999999764
No 394
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=6.1e-33 Score=241.20 Aligned_cols=203 Identities=25% Similarity=0.329 Sum_probs=163.6
Q ss_pred CccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCceee
Q 011508 162 SLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFEA 239 (484)
Q Consensus 162 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 239 (484)
+-.+.||-|+||.||.++ +-.+++.||+|++..... ...+.+.+|+++|..++|.|++..++...-....--.+.|
T Consensus 56 ~PDRPIGYGAFGVVWsVT--DPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiY 133 (449)
T KOG0664|consen 56 QPDRPIGYGAFGVVWSVT--DPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELY 133 (449)
T ss_pred CCCCcccccceeEEEecc--CCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHH
Confidence 345789999999999998 555789999998864332 3457899999999999999999888764322222223567
Q ss_pred EEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcccc
Q 011508 240 LVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKF 319 (484)
Q Consensus 240 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~ 319 (484)
+++|.| ..+|...+- .+..++...+.-+.+||++||+||| +.+|.||||||.|.|++.+...||+|||+++.
T Consensus 134 V~TELm-QSDLHKIIV----SPQ~Ls~DHvKVFlYQILRGLKYLH---sA~ILHRDIKPGNLLVNSNCvLKICDFGLARv 205 (449)
T KOG0664|consen 134 VLTELM-QSDLHKIIV----SPQALTPDHVKVFVYQILRGLKYLH---TANILHRDIKPGNLLVNSNCILKICDFGLART 205 (449)
T ss_pred HHHHHH-Hhhhhheec----cCCCCCcchhhhhHHHHHhhhHHHh---hcchhhccCCCccEEeccCceEEecccccccc
Confidence 889988 567777664 4567888899999999999999999 99999999999999999999999999999997
Q ss_pred cccccccCCCCccccccccccccccCccccCC-CCCCcccceehhhHHHHHHHhCCCCCCCC
Q 011508 320 LPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-SEVSTSGDVYSFGILLLEMFTGKGPTNEM 380 (484)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~ 380 (484)
.+.+.... ....+-|..|+|||++.+ ..|+.+.||||.||++.||+..+..|...
T Consensus 206 ee~d~~~h------MTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq 261 (449)
T KOG0664|consen 206 WDQRDRLN------MTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAA 261 (449)
T ss_pred cchhhhhh------hHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhcc
Confidence 65433211 122346889999999887 46899999999999999999999888653
No 395
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=8e-31 Score=251.58 Aligned_cols=211 Identities=25% Similarity=0.314 Sum_probs=172.2
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
.-|..++.||-|+||.|.++. ..++...||.|.+.+.+ +........|-.||..-+.+=||++|.. |+++
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~--KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyyS-----FQDk 701 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVR--KVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYS-----FQDK 701 (1034)
T ss_pred cceEEEeeecccccceeEEEe--ecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEE-----eccC
Confidence 447778899999999999998 44457889999987553 3344567789999999999999999977 6778
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
+.+|+||+|++||++-.+|-.. .-+.+.-+..++..+..|+++.| ..|+|||||||+|||||.+|++||.|||
T Consensus 702 dnLYFVMdYIPGGDmMSLLIrm----gIFeE~LARFYIAEltcAiesVH---kmGFIHRDiKPDNILIDrdGHIKLTDFG 774 (1034)
T KOG0608|consen 702 DNLYFVMDYIPGGDMMSLLIRM----GIFEEDLARFYIAELTCAIESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFG 774 (1034)
T ss_pred CceEEEEeccCCccHHHHHHHh----ccCHHHHHHHHHHHHHHHHHHHH---hccceecccCccceEEccCCceeeeecc
Confidence 8999999999999999988633 23777777888899999999999 9999999999999999999999999999
Q ss_pred cccccccccccC----------C--CCc-----------------------cccccccccccccCccccCCCCCCcccce
Q 011508 316 LAKFLPEAANNL----------S--SNQ-----------------------SSSVGVKGTVGYAAPEYGMGSEVSTSGDV 360 (484)
Q Consensus 316 ~a~~~~~~~~~~----------~--~~~-----------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv 360 (484)
++.-+....+.. + ... ......+||..|+|||++....++..+|.
T Consensus 775 LCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdw 854 (1034)
T KOG0608|consen 775 LCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDW 854 (1034)
T ss_pred ccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchh
Confidence 986543221100 0 000 00113469999999999999999999999
Q ss_pred ehhhHHHHHHHhCCCCCCCCccC
Q 011508 361 YSFGILLLEMFTGKGPTNEMFTG 383 (484)
Q Consensus 361 ws~Gvvl~elltg~~p~~~~~~~ 383 (484)
||.|||||||+.|+.||......
T Consensus 855 ws~gvil~em~~g~~pf~~~tp~ 877 (1034)
T KOG0608|consen 855 WSVGVILYEMLVGQPPFLADTPG 877 (1034)
T ss_pred hHhhHHHHHHhhCCCCccCCCCC
Confidence 99999999999999999775544
No 396
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.97 E-value=5e-31 Score=250.81 Aligned_cols=197 Identities=25% Similarity=0.389 Sum_probs=166.3
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--------cchHHHHHHHHHHHcCC---CCCceeEeeee
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--------GASKSFIAECQALRSIR---HRNLVKIITSC 227 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~---h~niv~~~~~~ 227 (484)
.+|+..+.+|+|+||.|+.|+.+ .+...|+||.+.+..- ...-..-.|+++|..++ |+||++++++
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K--~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdf- 637 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHK--ENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDF- 637 (772)
T ss_pred ccceeeeeccccccceEEEeeec--ccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhe-
Confidence 46889999999999999999954 4467799998865431 11122456999999997 9999999999
Q ss_pred eeeccCCCceeeEEeeccc-CCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCC
Q 011508 228 VSVDFQGNDFEALVYELMV-NGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGE 306 (484)
Q Consensus 228 ~~~~~~~~~~~~lv~e~~~-~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~ 306 (484)
|++++++||+||-.. +.+|.+++.. ...+++.+...|++|++.|+++|| +.+|||||||-+|+.++.+
T Consensus 638 ----FEddd~yyl~te~hg~gIDLFd~IE~----kp~m~E~eAk~IFkQV~agi~hlh---~~~ivhrdikdenvivd~~ 706 (772)
T KOG1152|consen 638 ----FEDDDYYYLETEVHGEGIDLFDFIEF----KPRMDEPEAKLIFKQVVAGIKHLH---DQGIVHRDIKDENVIVDSN 706 (772)
T ss_pred ----eecCCeeEEEecCCCCCcchhhhhhc----cCccchHHHHHHHHHHHhcccccc---ccCceecccccccEEEecC
Confidence 778889999999763 5589999973 346999999999999999999999 9999999999999999999
Q ss_pred CceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCC-CcccceehhhHHHHHHHhCCCCCC
Q 011508 307 LTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEV-STSGDVYSFGILLLEMFTGKGPTN 378 (484)
Q Consensus 307 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dvws~Gvvl~elltg~~p~~ 378 (484)
|-+||+|||.+..... .....++||..|.|||++.+.+| +..-|||++|++||.++....||.
T Consensus 707 g~~klidfgsaa~~ks---------gpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 707 GFVKLIDFGSAAYTKS---------GPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred CeEEEeeccchhhhcC---------CCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 9999999999876522 22334679999999999999887 567899999999999999999985
No 397
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.96 E-value=3.5e-30 Score=223.88 Aligned_cols=257 Identities=20% Similarity=0.290 Sum_probs=191.0
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcC-CCCCceeEeeeeeeeccCCCc
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSI-RHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 236 (484)
.+.|.+.+.||+|.||.+-+++ +.++.+.+++|-+.... ...++|.+|...--.| .|.||+..|+.. |+..+
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~e--Hr~s~t~ivlKavp~p~-tt~~dF~rEfhY~~~Ls~H~hIi~tY~va----Fqt~d 95 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAE--HRQSKTRIVLKAVPRPQ-TTQADFVREFHYSFFLSPHQHIIDTYEVA----FQTSD 95 (378)
T ss_pred hhhhhHHHHhcccceeeEEeee--ccCCceEEEeeccCcch-hhHHHHHHHhccceeeccchhhhHHHHHH----hhcCc
Confidence 3568999999999999999998 66678899999887553 3457899998776666 689999988764 66677
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeee-c-CCCceEEccc
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLL-D-GELTAHVSDF 314 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll-~-~~~~~kl~Df 314 (484)
.++.++||++.|+|.+-+.. ..+.+.....++.|++.|+.||| ++++||||||.+|||+ + +...+|||||
T Consensus 96 ~YvF~qE~aP~gdL~snv~~-----~GigE~~~K~v~~ql~SAi~fMH---sknlVHRdlK~eNiLif~~df~rvKlcDF 167 (378)
T KOG1345|consen 96 AYVFVQEFAPRGDLRSNVEA-----AGIGEANTKKVFAQLLSAIEFMH---SKNLVHRDLKAENILIFDADFYRVKLCDF 167 (378)
T ss_pred eEEEeeccCccchhhhhcCc-----ccccHHHHHHHHHHHHHHHHHhh---ccchhhcccccceEEEecCCccEEEeeec
Confidence 88999999999999987752 34778888999999999999999 9999999999999999 3 3348999999
Q ss_pred CcccccccccccCCCCccccccccccccccCccccCCC-----CCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhH
Q 011508 315 GLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGS-----EVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHN 389 (484)
Q Consensus 315 g~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-----~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~ 389 (484)
|..+...... .....+..|.+||..... ...+.+|||.||++++..+||+.||............
T Consensus 168 G~t~k~g~tV----------~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~ 237 (378)
T KOG1345|consen 168 GLTRKVGTTV----------KYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWE 237 (378)
T ss_pred ccccccCcee----------hhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHH
Confidence 9987542211 112345678999964432 3577899999999999999999999865444444444
Q ss_pred HHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHH
Q 011508 390 FVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLS 465 (484)
Q Consensus 390 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 465 (484)
|..-.. +.. +.+... .......+.++.++-+.++|++|-...++..+...
T Consensus 238 ~~~w~~--rk~----~~~P~~--------------------F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~ 287 (378)
T KOG1345|consen 238 WEQWLK--RKN----PALPKK--------------------FNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKC 287 (378)
T ss_pred HHHHhc--ccC----ccCchh--------------------hcccCHHHHHHHHHhcCCcccccchhHHHHHHHHH
Confidence 332111 100 000000 01114467788888999999999776666665544
No 398
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.96 E-value=3.5e-31 Score=255.82 Aligned_cols=254 Identities=24% Similarity=0.329 Sum_probs=200.7
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
.++|.+...+|.|.||.||+++ +..+++..|+|+++........-.++|+-+++..+||||+.++|.+.. .+.
T Consensus 14 ~ddyellqrvgsgTygdvyKaR--d~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr-----~dk 86 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKAR--DKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLR-----RDK 86 (829)
T ss_pred ccchhheeeecCCcccchhhhc--ccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhh-----hcC
Confidence 4678999999999999999998 666789999999998877777888999999999999999999998543 448
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
.|+.||||.+|+|++.-+ ...++++.++....+..++|++||| +.+-+|||||-.||++++.+.+|++|||.+
T Consensus 87 lwicMEycgggslQdiy~----~TgplselqiayvcRetl~gl~ylh---s~gk~hRdiKGanilltd~gDvklaDfgvs 159 (829)
T KOG0576|consen 87 LWICMEYCGGGSLQDIYH----VTGPLSELQIAYVCRETLQGLKYLH---SQGKIHRDIKGANILLTDEGDVKLADFGVS 159 (829)
T ss_pred cEEEEEecCCCcccceee----ecccchhHHHHHHHhhhhccchhhh---cCCcccccccccceeecccCceeecccCch
Confidence 899999999999998776 3456999999999999999999999 899999999999999999999999999998
Q ss_pred cccccccccCCCCccccccccccccccCcccc---CCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhh
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYG---MGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEA 394 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~---~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 394 (484)
..+.. .......+.||+.|||||+. ..+.|...+|||+.|++..|+---++|..+...-. .+--...
T Consensus 160 aqita-------ti~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr-~l~LmTk-- 229 (829)
T KOG0576|consen 160 AQITA-------TIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMR-ALFLMTK-- 229 (829)
T ss_pred hhhhh-------hhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHH-HHHHhhc--
Confidence 75532 23344557899999999974 45679999999999999999988887743321100 0000000
Q ss_pred cchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 395 LPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 395 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
.-.++--..+ .......+.++++.|+..+|++|||++.++.
T Consensus 230 ------S~~qpp~lkD--------------------k~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 230 ------SGFQPPTLKD--------------------KTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred ------cCCCCCcccC--------------------CccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 0001100000 0111456788999999999999999998774
No 399
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.96 E-value=2.3e-30 Score=243.42 Aligned_cols=283 Identities=20% Similarity=0.248 Sum_probs=203.0
Q ss_pred hcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCC------CCCceeEeeeeeee
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIR------HRNLVKIITSCVSV 230 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~------h~niv~~~~~~~~~ 230 (484)
-..+|.+....|+|-|++|.+|.. ...+..||||++..... ..+.=+.|+++|++|+ --|+++++..
T Consensus 430 LD~RY~V~~~~GkGvFs~Vvra~D--~~r~~~vAiKIIRnNE~-M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~---- 502 (752)
T KOG0670|consen 430 LDSRYEVQGYTGKGVFSTVVRARD--QARGQEVAIKIIRNNEV-MHKTGLKELEILKKLNDADPEDKFHCLRLFRH---- 502 (752)
T ss_pred hcceeEEEeccccceeeeeeeccc--cCCCCeeEEEEeecchH-HhhhhhHHHHHHHHhhccCchhhhHHHHHHHH----
Confidence 456889999999999999999984 44456899999986542 2345678999999994 3467777776
Q ss_pred ccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCC-Cce
Q 011508 231 DFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGE-LTA 309 (484)
Q Consensus 231 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~-~~~ 309 (484)
|...+++|+|||-+ ..+|.+.|+.+.. ...|....+..++.|+.-||..|- ..+|+|.||||+|||+.+. ..+
T Consensus 503 -F~hknHLClVFE~L-slNLRevLKKyG~-nvGL~ikaVRsYaqQLflALklLK---~c~vlHaDIKPDNiLVNE~k~iL 576 (752)
T KOG0670|consen 503 -FKHKNHLCLVFEPL-SLNLREVLKKYGR-NVGLHIKAVRSYAQQLFLALKLLK---KCGVLHADIKPDNILVNESKNIL 576 (752)
T ss_pred -hhhcceeEEEehhh-hchHHHHHHHhCc-ccceeehHHHHHHHHHHHHHHHHH---hcCeeecccCccceEeccCccee
Confidence 55667999999998 6799999997764 345888899999999999999999 8999999999999999875 478
Q ss_pred EEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCc-cHh
Q 011508 310 HVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNL-TLH 388 (484)
Q Consensus 310 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~-~~~ 388 (484)
||||||.|....+.. ...+..+..|.|||++.+.+|+...|+||.||+||||.||+..|.+..+... .+.
T Consensus 577 KLCDfGSA~~~~ene---------itPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~ 647 (752)
T KOG0670|consen 577 KLCDFGSASFASENE---------ITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLF 647 (752)
T ss_pred eeccCcccccccccc---------ccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHH
Confidence 999999998764322 1223456789999999999999999999999999999999999987543321 111
Q ss_pred HHHHhhcchh-------hhhhcCcccccccccc-cchhh---------------hhhhccccccc--hhHHHHHHHhHhh
Q 011508 389 NFVKEALPER-------LAEIVDPVLLVEREEG-ETSEA---------------NAHKQRTRSFG--GKECLVSVLGIGV 443 (484)
Q Consensus 389 ~~~~~~~~~~-------~~~~~d~~l~~~~~~~-~~~~~---------------~~~~~~~~~~~--~~~~~~~l~~l~~ 443 (484)
.-+...+|.. ..+-.|..+..-+.+. ...+. .......+.+. ......++.+|+.
T Consensus 648 me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLd 727 (752)
T KOG0670|consen 648 MELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLD 727 (752)
T ss_pred HHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHH
Confidence 1122222322 1122222221111100 00000 00000000011 1234678899999
Q ss_pred ccCCCCcCCCCCHHHHHH
Q 011508 444 ICSSELPRERMNMEEVAA 461 (484)
Q Consensus 444 ~cl~~dP~~RPt~~evl~ 461 (484)
.|+..||++|.|..|++.
T Consensus 728 kml~LdP~KRit~nqAL~ 745 (752)
T KOG0670|consen 728 KMLILDPEKRITVNQALK 745 (752)
T ss_pred HHhccChhhcCCHHHHhc
Confidence 999999999999999875
No 400
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.96 E-value=1.1e-28 Score=222.64 Aligned_cols=211 Identities=30% Similarity=0.472 Sum_probs=177.2
Q ss_pred cccccceeEEEEEEcCCCCeeEEEEEEeeccCcc-chHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCceeeEEeecc
Q 011508 167 IGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRG-ASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFEALVYELM 245 (484)
Q Consensus 167 lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~ 245 (484)
||+|++|.||++.... ++..+++|++...... ..+.+.+|++.++.++|++++++++++. .....++++|++
T Consensus 1 l~~g~~~~v~~~~~~~--~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~-----~~~~~~~~~e~~ 73 (215)
T cd00180 1 LGEGGFGTVYLARDKK--TGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFE-----DENHLYLVMEYC 73 (215)
T ss_pred CCcCCceEEEEEEecC--CCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeee-----cCCeEEEEEecC
Confidence 6899999999998543 4688999998755432 3467899999999999999999999854 335789999999
Q ss_pred cCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecC-CCceEEcccCccccccccc
Q 011508 246 VNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDG-ELTAHVSDFGLAKFLPEAA 324 (484)
Q Consensus 246 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~-~~~~kl~Dfg~a~~~~~~~ 324 (484)
++++|.+++.... ..+++..++.++.++++++++|| ..+++|+||+|.||+++. ++.++|+|||.+.......
T Consensus 74 ~~~~l~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh---~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~ 147 (215)
T cd00180 74 EGGSLKDLLKENE---GKLSEDEILRILLQILEGLEYLH---SNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDK 147 (215)
T ss_pred CCCcHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCc
Confidence 9999999987432 35889999999999999999999 889999999999999999 8999999999998664322
Q ss_pred ccCCCCccccccccccccccCccccCCC-CCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchhhhhhc
Q 011508 325 NNLSSNQSSSVGVKGTVGYAAPEYGMGS-EVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPERLAEIV 403 (484)
Q Consensus 325 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (484)
. ......+...|++||..... ..+.++|+|++|++++++
T Consensus 148 ~-------~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l--------------------------------- 187 (215)
T cd00180 148 S-------LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL--------------------------------- 187 (215)
T ss_pred c-------hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH---------------------------------
Confidence 1 12224477889999998877 788999999999999999
Q ss_pred CcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 404 DPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 404 d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
..+.+++..|++.+|++||++.++++.
T Consensus 188 --------------------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 --------------------------------PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred --------------------------------HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 035678899999999999999999864
No 401
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.96 E-value=1.9e-29 Score=232.82 Aligned_cols=290 Identities=23% Similarity=0.311 Sum_probs=204.7
Q ss_pred HhcCCCCccCccccccceeEEEEEEcCC-CCeeEEEEEEeeccCccchHHHHHHHHHHHcC-CCCCceeEeeeeeeeccC
Q 011508 156 KATDGFSLENLIGAGSFGSVYKGIFDHD-DHETLVAVKVLNLQHRGASKSFIAECQALRSI-RHRNLVKIITSCVSVDFQ 233 (484)
Q Consensus 156 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 233 (484)
...+.|..+++||+|.|++||+++.... .....||+|.+.... ......+|+++|..+ .+.||+++.++ +.
T Consensus 33 ~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~~~~-----~r 105 (418)
T KOG1167|consen 33 FISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKLNGC-----FR 105 (418)
T ss_pred hhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcchhh-----hc
Confidence 3446788999999999999999986542 246789999886543 346789999999999 69999999998 67
Q ss_pred CCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCC-CceEEc
Q 011508 234 GNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGE-LTAHVS 312 (484)
Q Consensus 234 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~-~~~kl~ 312 (484)
.++...+|+||++.-+..++.. .++..++..+++.+..||+++| .+|||||||||+|++.+.. +.-.|.
T Consensus 106 nnd~v~ivlp~~~H~~f~~l~~-------~l~~~~i~~Yl~~ll~Al~~~h---~~GIvHRDiKpsNFL~n~~t~rg~Lv 175 (418)
T KOG1167|consen 106 NNDQVAIVLPYFEHDRFRDLYR-------SLSLAEIRWYLRNLLKALAHLH---KNGIVHRDIKPSNFLYNRRTQRGVLV 175 (418)
T ss_pred cCCeeEEEecccCccCHHHHHh-------cCCHHHHHHHHHHHHHHhhhhh---ccCccccCCCccccccccccCCceEE
Confidence 7889999999999988888875 3678899999999999999999 9999999999999999754 578999
Q ss_pred ccCccccccccc------c------cC-------------------------CCCccccccccccccccCccccCC-CCC
Q 011508 313 DFGLAKFLPEAA------N------NL-------------------------SSNQSSSVGVKGTVGYAAPEYGMG-SEV 354 (484)
Q Consensus 313 Dfg~a~~~~~~~------~------~~-------------------------~~~~~~~~~~~g~~~y~aPE~~~~-~~~ 354 (484)
|||+|...+... . .. ...........||++|+|||++.. ..-
T Consensus 176 DFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~Q 255 (418)
T KOG1167|consen 176 DFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQ 255 (418)
T ss_pred echhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCc
Confidence 999997321111 0 00 000011124569999999998776 456
Q ss_pred CcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchhhh---hhcCcccccc-------------cccccchh
Q 011508 355 STSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPERLA---EIVDPVLLVE-------------REEGETSE 418 (484)
Q Consensus 355 ~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~d~~l~~~-------------~~~~~~~~ 418 (484)
++++||||.|||++-+++++.||....++-..+.+.+.-.-...+. ...+..+..+ ++......
T Consensus 256 ttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~ 335 (418)
T KOG1167|consen 256 TTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIES 335 (418)
T ss_pred CCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhh
Confidence 8899999999999999999999977666555555544322221111 1111100000 00000000
Q ss_pred hhhhhc-cccccchhHH-HHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 419 ANAHKQ-RTRSFGGKEC-LVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 419 ~~~~~~-~~~~~~~~~~-~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
.....+ ..+.....++ +..+.+++.+|+..||.+|.|++|.+..
T Consensus 336 ~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkH 381 (418)
T KOG1167|consen 336 IYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKH 381 (418)
T ss_pred cccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcC
Confidence 000000 0011112233 3478999999999999999999999853
No 402
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.96 E-value=1.4e-29 Score=225.25 Aligned_cols=202 Identities=23% Similarity=0.294 Sum_probs=164.0
Q ss_pred hcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeecc--CccchHHHHHHHHHHHcCCCCCceeEeeeeeeecc-C
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQ--HRGASKSFIAECQALRSIRHRNLVKIITSCVSVDF-Q 233 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~-~ 233 (484)
...+|.-...+|.|.- .|..|. +.-.++.||+|.+... .....++..+|+..+..++|+|+++++.++.-... .
T Consensus 15 v~~Ry~nL~p~~~g~~-~v~~a~--D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~ 91 (369)
T KOG0665|consen 15 VPKRYVNLKPIGSGAQ-IVVAAF--DQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLE 91 (369)
T ss_pred eeeeeeeecccCCCCc-eEEecc--hhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHH
Confidence 3456777788999988 666665 5556788999987543 23445778899999999999999999988653221 1
Q ss_pred CCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcc
Q 011508 234 GNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSD 313 (484)
Q Consensus 234 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~D 313 (484)
.-...|+|||+| ..+|.+.+.. .++-..+..|+.|++.|++||| +.+|+||||||+||++..+..+||.|
T Consensus 92 ~~~e~y~v~e~m-~~nl~~vi~~------elDH~tis~i~yq~~~~ik~lh---s~~IihRdLkPsnivv~~~~~lKi~d 161 (369)
T KOG0665|consen 92 EFQEVYLVMELM-DANLCQVILM------ELDHETISYILYQMLCGIKHLH---SAGIIHRDLKPSNIVVNSDCTLKILD 161 (369)
T ss_pred HHHhHHHHHHhh-hhHHHHHHHH------hcchHHHHHHHHHHHHHHHHHH---hcceeecccCcccceecchhheeecc
Confidence 123578999999 7799998872 2667788899999999999999 99999999999999999999999999
Q ss_pred cCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCC
Q 011508 314 FGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNE 379 (484)
Q Consensus 314 fg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~ 379 (484)
||+|+.-... -.....+.|..|+|||++.+..+.+.+||||+||++.||++|+..|.+
T Consensus 162 fg~ar~e~~~--------~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g 219 (369)
T KOG0665|consen 162 FGLARTEDTD--------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPG 219 (369)
T ss_pred chhhcccCcc--------cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecC
Confidence 9999854322 123446789999999999998899999999999999999999988763
No 403
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.96 E-value=2.7e-28 Score=222.69 Aligned_cols=200 Identities=33% Similarity=0.473 Sum_probs=168.2
Q ss_pred CCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCcc-chHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCceee
Q 011508 161 FSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRG-ASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFEA 239 (484)
Q Consensus 161 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 239 (484)
|.+.+.||+|++|.||++.... ++..+++|.+...... ..+.+.+|++.+.+++|+|++++++++.. ....+
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~--~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~-----~~~~~ 73 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKG--TGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFED-----PEPLY 73 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcC--CCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeec-----CCceE
Confidence 5677899999999999998543 4678999999866544 56788999999999999999999998543 34789
Q ss_pred EEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcccc
Q 011508 240 LVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKF 319 (484)
Q Consensus 240 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~ 319 (484)
+++|++++++|.+++..... .+++..+..++.+++.++.+|| ..+++|+||+|+||+++.++.++|+|||.+..
T Consensus 74 ~v~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~ 147 (225)
T smart00221 74 LVMEYCEGGDLFDYLRKKGG---KLSEEEARFYLRQILEALEYLH---SLGIVHRDLKPENILLGMDGLVKLADFGLARF 147 (225)
T ss_pred EEEeccCCCCHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeeCceeeE
Confidence 99999999999999974332 1789999999999999999999 88999999999999999999999999999887
Q ss_pred cccccccCCCCccccccccccccccCcccc-CCCCCCcccceehhhHHHHHHHhCCCCCCC
Q 011508 320 LPEAANNLSSNQSSSVGVKGTVGYAAPEYG-MGSEVSTSGDVYSFGILLLEMFTGKGPTNE 379 (484)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~-~~~~~~~~~Dvws~Gvvl~elltg~~p~~~ 379 (484)
..... ........++..|++||.. ....++.++|||+||+++++|++|+.||..
T Consensus 148 ~~~~~------~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 148 IHRDL------AALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ecCcc------cccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 64332 0011234577889999988 667788899999999999999999999965
No 404
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.94 E-value=6.1e-27 Score=205.44 Aligned_cols=170 Identities=22% Similarity=0.240 Sum_probs=126.6
Q ss_pred CCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcccccccccccC
Q 011508 248 GSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFLPEAANNL 327 (484)
Q Consensus 248 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 327 (484)
|+|.++++.. ...+++.+++.|+.|++.||+||| +++ ||+||+++.++.+|+ ||.+.......
T Consensus 1 GsL~~~l~~~---~~~l~~~~~~~i~~qi~~~L~~lH---~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~~--- 63 (176)
T smart00750 1 VSLADILEVR---GRPLNEEEIWAVCLQCLRALRELH---RQA------KSGNILLTWDGLLKL--DGSVAFKTPEQ--- 63 (176)
T ss_pred CcHHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHH---hcC------CcccEeEcCccceee--ccceEeecccc---
Confidence 6899999743 345999999999999999999999 555 999999999999999 99987653211
Q ss_pred CCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchhhhhhcCccc
Q 011508 328 SSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPERLAEIVDPVL 407 (484)
Q Consensus 328 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 407 (484)
..|++.|+|||++.+..++.++|||||||++|||+||+.||.........+..+.....+
T Consensus 64 ---------~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~----------- 123 (176)
T smart00750 64 ---------SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPA----------- 123 (176)
T ss_pred ---------CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhcc-----------
Confidence 147899999999999999999999999999999999999986532211111111111000
Q ss_pred ccccccccchhhhhhhccccccchhHHH--HHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHHH
Q 011508 408 LVEREEGETSEANAHKQRTRSFGGKECL--VSVLGIGVICSSELPRERMNMEEVAAQLLSFRNK 469 (484)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~ 469 (484)
....... ...... .++.+++.+||+.+|++||++.|+++.+..+...
T Consensus 124 -~~~~~~~--------------~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~~ 172 (176)
T smart00750 124 -DDPRDRS--------------NLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALFAE 172 (176)
T ss_pred -CCccccc--------------cHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHHH
Confidence 0000000 011112 2689999999999999999999999999877543
No 405
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.94 E-value=2e-27 Score=255.07 Aligned_cols=207 Identities=18% Similarity=0.256 Sum_probs=138.1
Q ss_pred cCCC-CCceeEeeeeeeecc--CCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC
Q 011508 214 SIRH-RNLVKIITSCVSVDF--QGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETP 290 (484)
Q Consensus 214 ~l~h-~niv~~~~~~~~~~~--~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ 290 (484)
.++| +||.+++++|..... ......+.++|++ +++|.+++... ...+++.+++.++.||++||+||| +++
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH---~~g 100 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP---DRSVDAFECFHVFRQIVEIVNAAH---SQG 100 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc---cccccHHHHHHHHHHHHHHHHHHH---hCC
Confidence 3445 577777776522111 1223567788988 77999999732 345899999999999999999999 899
Q ss_pred eeecCCCCCCeeecCC-------------------CceEEcccCccccccccccc----C-----CCCcccccccccccc
Q 011508 291 IVHCDLKPSNVLLDGE-------------------LTAHVSDFGLAKFLPEAANN----L-----SSNQSSSVGVKGTVG 342 (484)
Q Consensus 291 ivH~dlk~~NIll~~~-------------------~~~kl~Dfg~a~~~~~~~~~----~-----~~~~~~~~~~~g~~~ 342 (484)
|+||||||+||||+.. +.+|++|||+++........ . ...........||+.
T Consensus 101 IvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 180 (793)
T PLN00181 101 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSW 180 (793)
T ss_pred eeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcc
Confidence 9999999999999654 44556666665432110000 0 000001112458889
Q ss_pred ccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhh
Q 011508 343 YAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAH 422 (484)
Q Consensus 343 y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~ 422 (484)
|+|||++.+..++.++|||||||+||||++|..|+..... .+..... ....+..
T Consensus 181 Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~---~~~~~~~--------~~~~~~~--------------- 234 (793)
T PLN00181 181 YTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR---TMSSLRH--------RVLPPQI--------------- 234 (793)
T ss_pred eEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH---HHHHHHH--------hhcChhh---------------
Confidence 9999999999999999999999999999999888643110 0000000 0010000
Q ss_pred hccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 423 KQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 423 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
.........++..||+++|.+||++.||++.
T Consensus 235 ---------~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h 265 (793)
T PLN00181 235 ---------LLNWPKEASFCLWLLHPEPSCRPSMSELLQS 265 (793)
T ss_pred ---------hhcCHHHHHHHHHhCCCChhhCcChHHHhhc
Confidence 0002335678889999999999999999853
No 406
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.92 E-value=5e-24 Score=204.73 Aligned_cols=270 Identities=24% Similarity=0.300 Sum_probs=197.6
Q ss_pred CCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCC----CCceeEeeeeeeeccCCC
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRH----RNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h----~niv~~~~~~~~~~~~~~ 235 (484)
+|.+.+.||+|+||.||.+...... ...+|+|............+..|..++..+.. +++..+++... ..+
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~-~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~----~~~ 93 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEK-NKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGR----STE 93 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCC-CeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEecc----CCC
Confidence 7999999999999999999854333 46788888776543333367788888888863 57778777631 355
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCC-----CceE
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGE-----LTAH 310 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~-----~~~k 310 (484)
.+.++||+.+ |.+|.++..... .+.++..+++.|+.|++.+|++|| +.|++||||||+|+.+... ..+.
T Consensus 94 ~~~~iVM~l~-G~sL~dl~~~~~--~~~fs~~T~l~ia~q~l~~l~~lH---~~G~iHRDiKp~N~~~g~~~~~~~~~~~ 167 (322)
T KOG1164|consen 94 DFNFIVMSLL-GPSLEDLRKRNP--PGRFSRKTVLRIAIQNLNALEDLH---SKGFIHRDIKPENFVVGQSSRSEVRTLY 167 (322)
T ss_pred ceeEEEEecc-CccHHHHHHhCC--CCCcCHhHHHHHHHHHHHHHHHHH---hcCcccCCcCHHHeeecCCCCcccceEE
Confidence 6889999998 999999886544 467999999999999999999999 9999999999999999754 4699
Q ss_pred EcccCcccccc--cccccC-CCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccH
Q 011508 311 VSDFGLAKFLP--EAANNL-SSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTL 387 (484)
Q Consensus 311 l~Dfg~a~~~~--~~~~~~-~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~ 387 (484)
|.|||+++... ...+.. ...........||..|.++....+...+.+.|+||++.++.|++.|..||........ .
T Consensus 168 llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~-~ 246 (322)
T KOG1164|consen 168 LLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDL-K 246 (322)
T ss_pred EEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccch-H
Confidence 99999998332 222111 1111112446699999999999999999999999999999999999999965432211 1
Q ss_pred hHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHH
Q 011508 388 HNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFR 467 (484)
Q Consensus 388 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~ 467 (484)
.+..... ....... . ...++.++.++...+-..+..++|....+.+.++...
T Consensus 247 ~~~~~~~----~~~~~~~-~-----------------------~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~ 298 (322)
T KOG1164|consen 247 SKFEKDP----RKLLTDR-F-----------------------GDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVF 298 (322)
T ss_pred HHHHHHh----hhhcccc-c-----------------------cCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHH
Confidence 1111100 0001100 0 0111445666666666689999999999999987765
Q ss_pred HH
Q 011508 468 NK 469 (484)
Q Consensus 468 ~~ 469 (484)
..
T Consensus 299 ~~ 300 (322)
T KOG1164|consen 299 DS 300 (322)
T ss_pred Hh
Confidence 54
No 407
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.92 E-value=4.4e-26 Score=198.52 Aligned_cols=249 Identities=24% Similarity=0.312 Sum_probs=187.5
Q ss_pred CCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCcee
Q 011508 161 FSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFE 238 (484)
Q Consensus 161 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 238 (484)
..+..+|.+...|..|+|+|+. ..+++|+++.... ....+|..|.-.|+.+.||||+++++.|.... ..
T Consensus 192 lnl~tkl~e~hsgelwrgrwqg----ndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnspp-----nl 262 (448)
T KOG0195|consen 192 LNLITKLAESHSGELWRGRWQG----NDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPP-----NL 262 (448)
T ss_pred hhhhhhhccCCCcccccccccC----cchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCC-----Cc
Confidence 3455678999999999999973 3477788765432 33468999999999999999999999986543 78
Q ss_pred eEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEc--ccCc
Q 011508 239 ALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVS--DFGL 316 (484)
Q Consensus 239 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~--Dfg~ 316 (484)
.++..||+.|+|...++... ....+..++.+++.++++|++|||+. ..-|.---|.+..+++|++.+++|+ |--+
T Consensus 263 v~isq~mp~gslynvlhe~t--~vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltarismad~kf 339 (448)
T KOG0195|consen 263 VIISQYMPFGSLYNVLHEQT--SVVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARISMADTKF 339 (448)
T ss_pred eEeeeeccchHHHHHHhcCc--cEEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhheeccccee
Confidence 89999999999999998543 34577788999999999999999976 4455555799999999999988874 3222
Q ss_pred ccccccccccCCCCccccccccccccccCccccCCCCC---CcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHh
Q 011508 317 AKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEV---STSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKE 393 (484)
Q Consensus 317 a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~---~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 393 (484)
+..- .+..-.+.|++||.++..+- -.++|+|||.+++|||.|...||.+..+-+....-..
T Consensus 340 sfqe--------------~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkial-- 403 (448)
T KOG0195|consen 340 SFQE--------------VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIAL-- 403 (448)
T ss_pred eeec--------------cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhh--
Confidence 2110 11235688999999887653 3579999999999999999999987543221111000
Q ss_pred hcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHH
Q 011508 394 ALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFR 467 (484)
Q Consensus 394 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~ 467 (484)
+.+. ...+++....+.+|+.-|+..||.+||.+..|+-.|++++
T Consensus 404 ---eglr---------------------------v~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 404 ---EGLR---------------------------VHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred ---cccc---------------------------ccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 0011 1113344667889999999999999999999999998764
No 408
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.92 E-value=1.3e-24 Score=207.94 Aligned_cols=174 Identities=21% Similarity=0.162 Sum_probs=128.7
Q ss_pred HhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC-----ccchHHHHHHHHHHHcCCCCCceeEeeeeeee
Q 011508 156 KATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH-----RGASKSFIAECQALRSIRHRNLVKIITSCVSV 230 (484)
Q Consensus 156 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 230 (484)
...++|.+.+.||+|+||+||+|..... ++..||||++.... ......+.+|+++|++++|+|+++.+..+
T Consensus 15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~-~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~--- 90 (365)
T PRK09188 15 ALSARFVETAVLKRDVFSTVERGYFAGD-PGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT--- 90 (365)
T ss_pred cccCCceEccEEeecCcEEEEEEEEcCC-CCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc---
Confidence 3457899999999999999999985432 35678999875321 11245689999999999999998643221
Q ss_pred ccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCC-CCCCeeecCCCce
Q 011508 231 DFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDL-KPSNVLLDGELTA 309 (484)
Q Consensus 231 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl-k~~NIll~~~~~~ 309 (484)
...++||||+++++|.. +. . .. ...++.|++++|+||| +++|+|||| ||+||+++.++.+
T Consensus 91 -----~~~~LVmE~~~G~~L~~-~~---~----~~---~~~~~~~i~~aL~~lH---~~gIiHrDL~KP~NILv~~~~~i 151 (365)
T PRK09188 91 -----GKDGLVRGWTEGVPLHL-AR---P----HG---DPAWFRSAHRALRDLH---RAGITHNDLAKPQNWLMGPDGEA 151 (365)
T ss_pred -----CCcEEEEEccCCCCHHH-hC---c----cc---hHHHHHHHHHHHHHHH---HCCCeeCCCCCcceEEEcCCCCE
Confidence 24689999999999963 21 0 11 1457889999999999 899999999 9999999999999
Q ss_pred EEcccCcccccccccccCCC-CccccccccccccccCccccCCC
Q 011508 310 HVSDFGLAKFLPEAANNLSS-NQSSSVGVKGTVGYAAPEYGMGS 352 (484)
Q Consensus 310 kl~Dfg~a~~~~~~~~~~~~-~~~~~~~~~g~~~y~aPE~~~~~ 352 (484)
||+|||+++.+........- ....-....+++.|.|||.+...
T Consensus 152 kLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 152 AVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred EEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 99999999977543211100 00111345688899999987643
No 409
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.90 E-value=1.2e-22 Score=182.08 Aligned_cols=208 Identities=23% Similarity=0.357 Sum_probs=171.9
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcC-CCCCceeEeeeeeeeccCCCc
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSI-RHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 236 (484)
.-.|.++++||+|+||.++.|+ +--++..||||.-...+ ...++..|.+..+.| ..++|..++.+ -+.+.
T Consensus 27 G~hyrVGkKIGeGsFG~lf~G~--Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYF-----GqeG~ 97 (449)
T KOG1165|consen 27 GPHYRVGKKIGEGSFGVLFLGK--NLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYF-----GQEGK 97 (449)
T ss_pred cccceeccccccCcceeeeccc--ccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeee-----ccccc
Confidence 3478999999999999999998 44567899999765433 346788898888888 56888887765 34455
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCC-----ceEE
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGEL-----TAHV 311 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~-----~~kl 311 (484)
+-.+|+|.+ |.||++++.-. ++.++..++..+|.|++.-++|+| ++.+|.|||||+|+||...+ .+.+
T Consensus 98 ~NiLVidLL-GPSLEDLFD~C---gR~FSvKTV~miA~Qmi~rie~vH---~k~LIYRDIKPdNFLIGrp~~k~~n~Ihi 170 (449)
T KOG1165|consen 98 YNILVIDLL-GPSLEDLFDLC---GRRFSVKTVAMIAKQMITRIEYVH---EKDLIYRDIKPDNFLIGRPGTKDANVIHI 170 (449)
T ss_pred hhhhhhhhh-CcCHHHHHHHh---cCcccHHhHHHHHHHHHHHHHHHH---hcceeecccCccceeecCCCCCCCceEEE
Confidence 778999999 99999998743 457999999999999999999999 99999999999999996543 6899
Q ss_pred cccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCc
Q 011508 312 SDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMF 381 (484)
Q Consensus 312 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~ 381 (484)
+|||+|+.+.+......-.........||.+||+-....+.+-+.+.|+-|+|-++.+.+-|..||.+..
T Consensus 171 iDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLK 240 (449)
T KOG1165|consen 171 IDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLK 240 (449)
T ss_pred EeccchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCcccccc
Confidence 9999999885544333333334455679999999998889999999999999999999999999998753
No 410
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.89 E-value=1.2e-22 Score=174.27 Aligned_cols=210 Identities=26% Similarity=0.377 Sum_probs=169.0
Q ss_pred HhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCC-CCceeEeeeeeeeccCC
Q 011508 156 KATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRH-RNLVKIITSCVSVDFQG 234 (484)
Q Consensus 156 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~~~~~~~~~~~~~ 234 (484)
...+.|.++++||.|+||.+|.|. .-.++..||||+-+.... ..++..|..+...|++ ..|..+..+ ..+
T Consensus 12 iv~gky~lvrkiGsGSFGdIy~~~--~i~~ge~VAiK~Es~~a~--hpqL~yEskvY~iL~~g~GiP~i~~y-----~~e 82 (341)
T KOG1163|consen 12 IVGGKYKLVRKIGSGSFGDIYLGI--SITSGEEVAIKLESSKAK--HPQLLYESKVYRILQGGVGIPHIRHY-----GTE 82 (341)
T ss_pred eeccceEEEEeecCCchhheeeee--eccCCceEEEEeecccCC--CcchhHHHHHHHHhccCCCCchhhhh-----ccc
Confidence 345789999999999999999998 555788999998764432 3567788888888865 445555444 345
Q ss_pred CceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCC---CceEE
Q 011508 235 NDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGE---LTAHV 311 (484)
Q Consensus 235 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~---~~~kl 311 (484)
..+-.+||+.+ |.||++++.-. .+.++..+++-++-|++.-++|+| .++++||||||+|+|..-+ ..+.+
T Consensus 83 ~~ynvlVMdLL-GPsLEdLfnfC---~R~ftmkTvLMLaDQml~RiEyvH---~r~fiHRDIKPdNFLMGlgrh~~kl~L 155 (341)
T KOG1163|consen 83 KDYNVLVMDLL-GPSLEDLFNFC---SRRFTMKTVLMLADQMLSRIEYVH---LRNFIHRDIKPDNFLMGLGRHCNKLYL 155 (341)
T ss_pred cccceeeeecc-CccHHHHHHHH---hhhhhHHhHHHHHHHHHHHHHHHH---hhccccccCCccceeeccccccceEEE
Confidence 56778999999 99999998743 346899999999999999999999 9999999999999999543 47899
Q ss_pred cccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCc
Q 011508 312 SDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMF 381 (484)
Q Consensus 312 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~ 381 (484)
+|||+|+.+.+......-.........||..|.+-....+..-+.+.|+-|+|.+|.++.-|..||.+..
T Consensus 156 IDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglk 225 (341)
T KOG1163|consen 156 IDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLK 225 (341)
T ss_pred EeccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccc
Confidence 9999999875544333333334455679999999887777788899999999999999999999998753
No 411
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.88 E-value=2.6e-21 Score=187.37 Aligned_cols=264 Identities=31% Similarity=0.404 Sum_probs=192.8
Q ss_pred CCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCcc---chHHHHHHHHHHHcCCCC-CceeEeeeeeeeccCCCc
Q 011508 161 FSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRG---ASKSFIAECQALRSIRHR-NLVKIITSCVSVDFQGND 236 (484)
Q Consensus 161 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~-niv~~~~~~~~~~~~~~~ 236 (484)
|.+...||.|+||.||++... ..+++|.+...... ....+.+|+.++..+.|+ +++++++.+ ....
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~-----~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~-----~~~~ 71 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR-----KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFF-----QDEG 71 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec-----cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEE-----ecCC
Confidence 667789999999999999854 67899988765443 356799999999999988 799999885 2333
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCC-ceEEcccC
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGEL-TAHVSDFG 315 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~-~~kl~Dfg 315 (484)
..+++++++.++++.+++...... ..+.......+..|++.+++|+| ..+++|||+||+||+++... .++++|||
T Consensus 72 ~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~H---~~~~~hrd~kp~nil~~~~~~~~~l~dfg 147 (384)
T COG0515 72 SLYLVMEYVDGGSLEDLLKKIGRK-GPLSESEALFILAQILSALEYLH---SKGIIHRDIKPENILLDRDGRVVKLIDFG 147 (384)
T ss_pred EEEEEEecCCCCcHHHHHHhcccc-cCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeecCCCCeEEEeccC
Confidence 479999999999999777643211 35888999999999999999999 88999999999999999988 79999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCC---CCCCcccceehhhHHHHHHHhCCCCCCCCccC--CccHhHH
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG---SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTG--NLTLHNF 390 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~---~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~--~~~~~~~ 390 (484)
.+............. .......|+..|+|||.+.+ ..++...|+||+|++++++++|..||...... .......
T Consensus 148 ~~~~~~~~~~~~~~~-~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 226 (384)
T COG0515 148 LAKLLPDPGSTSSIP-ALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKI 226 (384)
T ss_pred cceecCCCCcccccc-ccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHH
Confidence 998554332111000 12345679999999999887 57889999999999999999999997653221 0111111
Q ss_pred HHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 391 VKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 391 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
+...... .......... .......+.+++..|+..+|..|.++.+....
T Consensus 227 ~~~~~~~--------~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 227 ILELPTP--------SLASPLSPSN---------------PELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred HHhcCCc--------ccccccCccc---------------cchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 1111000 0000000000 01113467889999999999999999988765
No 412
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.88 E-value=2.8e-23 Score=211.70 Aligned_cols=258 Identities=20% Similarity=0.202 Sum_probs=179.1
Q ss_pred CccCccccccceeEEEEEEcCCCCeeEEEEEEeecc--Cccch----HHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 162 SLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQ--HRGAS----KSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 162 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~--~~~~~----~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
...+.+|.|++|.|+...... .....+.|.+... ..... ..+..|+-+-..+.|+|++..+..+....
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~--~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~---- 394 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRS--DLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEID---- 394 (601)
T ss_pred CccceeeecccCceEEEEecC--CCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcc----
Confidence 356789999999777766322 2222333322210 11111 22556777777889999988777643322
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
...-+||||++ +|..++... ..++..++..++.|+..|++||| ..+|.|||+|++|++++.++.+||+|||
T Consensus 395 -~~~~~mE~~~~-Dlf~~~~~~----~~~~~~e~~c~fKqL~~Gv~y~h---~~GiahrdlK~enll~~~~g~lki~Dfg 465 (601)
T KOG0590|consen 395 -GILQSMEYCPY-DLFSLVMSN----GKLTPLEADCFFKQLLRGVKYLH---SMGLAHRDLKLENLLVTENGILKIIDFG 465 (601)
T ss_pred -cchhhhhcccH-HHHHHHhcc----cccchhhhhHHHHHHHHHHHHHH---hcCceeccCccccEEEecCCceEEeecC
Confidence 33344999999 999999743 34788889999999999999999 9999999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCCCCCCc-ccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhh
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVST-SGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEA 394 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~-~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 394 (484)
.+..+.-... .........+|+..|+|||.+.+..|.+ ..||||.|+++..|.+|+.||.........+ ....
T Consensus 466 ~~~vf~~~~e---~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~---~~~~ 539 (601)
T KOG0590|consen 466 AASVFRYPWE---KNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF---KTNN 539 (601)
T ss_pred cceeeccCcc---hhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccch---hhhc
Confidence 9876633221 1123445678999999999999998876 5899999999999999999997654333221 0000
Q ss_pred cchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 395 LPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 395 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
......... . ........+..-..++.++|+.||.+|.|+++|++.
T Consensus 540 ~~~~~~~~~---------------~-------~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d 585 (601)
T KOG0590|consen 540 YSDQRNIFE---------------G-------PNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILND 585 (601)
T ss_pred ccccccccc---------------C-------hHHHHHhchhhHHHHHHHHccCChhheecHHHHhhC
Confidence 000000000 0 000012225566789999999999999999999863
No 413
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.87 E-value=3e-22 Score=183.58 Aligned_cols=207 Identities=21% Similarity=0.222 Sum_probs=146.4
Q ss_pred CCCCceeEeeeeeee----------------------ccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHH
Q 011508 216 RHRNLVKIITSCVSV----------------------DFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIA 273 (484)
Q Consensus 216 ~h~niv~~~~~~~~~----------------------~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~ 273 (484)
+|||||++.+++.+. ....+...|+||..+ ..+|.+++..+ ..+.....-++
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY-~~tLr~yl~~~-----~~s~r~~~~~l 347 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRY-RQTLREYLWTR-----HRSYRTGRVIL 347 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcc-hhhHHHHHhcC-----CCchHHHHHHH
Confidence 599999998876542 122345678999888 55899998633 35667777899
Q ss_pred HHHHHHHHHHHhcCCCCeeecCCCCCCeee--cCCC--ceEEcccCcccccccccccCCCCccccccccccccccCcccc
Q 011508 274 VDVASTLEYLHHYCETPIVHCDLKPSNVLL--DGEL--TAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYG 349 (484)
Q Consensus 274 ~~i~~~l~~LH~~~~~~ivH~dlk~~NIll--~~~~--~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~ 349 (484)
.|+++|+.||| .++|.|||+|++|||+ |+|. ...|+|||++---+. ....-....-.....|.-..||||+.
T Consensus 348 aQlLEav~hL~---~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~-hGlqlpy~S~~Vd~GGNa~lmAPEi~ 423 (598)
T KOG4158|consen 348 AQLLEAVTHLH---KHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDN-HGLQLPYESDEVDLGGNAKLMAPEIA 423 (598)
T ss_pred HHHHHHHHHHH---HccchhhcccccceEEEecCCCCcEEEEcccceeeeccc-cccccccccccccCCCcceecchhhh
Confidence 99999999999 9999999999999999 4443 678899998743221 11111122223345688889999987
Q ss_pred CCCC------CCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhh
Q 011508 350 MGSE------VSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHK 423 (484)
Q Consensus 350 ~~~~------~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ 423 (484)
...+ .-.|+|.|+.|.+.||+++...||.....-..+...+-....|.
T Consensus 424 ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~qLPa-------------------------- 477 (598)
T KOG4158|consen 424 TAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQLPA-------------------------- 477 (598)
T ss_pred hcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhhCCC--------------------------
Confidence 6532 23589999999999999999999976322222222211111110
Q ss_pred ccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHH
Q 011508 424 QRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLL 464 (484)
Q Consensus 424 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~ 464 (484)
.++.|+..+.+++...++.||++|++..-....|.
T Consensus 478 ------lp~~vpp~~rqlV~~lL~r~pskRvsp~iAANvl~ 512 (598)
T KOG4158|consen 478 ------LPSRVPPVARQLVFDLLKRDPSKRVSPNIAANVLN 512 (598)
T ss_pred ------CcccCChHHHHHHHHHhcCCccccCCccHHHhHHH
Confidence 13455777889999999999999999887766654
No 414
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.87 E-value=4.5e-23 Score=210.23 Aligned_cols=250 Identities=20% Similarity=0.208 Sum_probs=176.9
Q ss_pred CCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc-cchHHHHHHHHH--HHcCCCCCceeEeeeeeeeccCCCc
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR-GASKSFIAECQA--LRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~--l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
+|...+.||++.|=+|.+|+.+ .| .|+||++-+... -..+.|.++++- ...++|||.+++... ...+.
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~---eG-~vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~-----~~t~k 94 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDR---EG-LVVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKV-----LVTDK 94 (1431)
T ss_pred ceeeecccCchhhhhhhhccCC---Cc-eEEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHH-----HHhhH
Confidence 5677789999999999999744 23 489999876553 233444444333 444599999988765 34455
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCc
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGL 316 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 316 (484)
..|+|-+|. .-+|.|.+. ...-+...+...|+.|++.||..+| ..+|+|||||.+|||++.-.-+.|+||..
T Consensus 95 AAylvRqyv-khnLyDRlS----TRPFL~~iEKkWiaFQLL~al~qcH---~~gVcHGDIKsENILiTSWNW~~LtDFAs 166 (1431)
T KOG1240|consen 95 AAYLVRQYV-KHNLYDRLS----TRPFLVLIEKKWIAFQLLKALSQCH---KLGVCHGDIKSENILITSWNWLYLTDFAS 166 (1431)
T ss_pred HHHHHHHHH-hhhhhhhhc----cchHHHHHHHHHHHHHHHHHHHHHH---HcCccccccccceEEEeeechhhhhcccc
Confidence 678888888 558888886 3334778888899999999999999 99999999999999999999999999987
Q ss_pred ccccccccccCCCCccccccccccccccCccccCC----------CC-CCcccceehhhHHHHHHHh-CCCCCCCCccCC
Q 011508 317 AKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG----------SE-VSTSGDVYSFGILLLEMFT-GKGPTNEMFTGN 384 (484)
Q Consensus 317 a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~----------~~-~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~ 384 (484)
.+..--..++.....-.........+|.|||.+.. .. .+++.||||+||++.||++ |++||.-.
T Consensus 167 FKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS---- 242 (1431)
T KOG1240|consen 167 FKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS---- 242 (1431)
T ss_pred cCCccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH----
Confidence 65432222222222222233445678999996443 12 6789999999999999998 89888531
Q ss_pred ccHhHHHHh--hcchh-hhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 385 LTLHNFVKE--ALPER-LAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 385 ~~~~~~~~~--~~~~~-~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
.+-.+... ..++. +..+- ...+..++..|++.||++|-++++.++
T Consensus 243 -QL~aYr~~~~~~~e~~Le~Ie-------------------------------d~~~Rnlil~Mi~rdPs~RlSAedyL~ 290 (1431)
T KOG1240|consen 243 -QLLAYRSGNADDPEQLLEKIE-------------------------------DVSLRNLILSMIQRDPSKRLSAEDYLQ 290 (1431)
T ss_pred -HHHhHhccCccCHHHHHHhCc-------------------------------CccHHHHHHHHHccCchhccCHHHHHH
Confidence 01111110 00111 11111 224678999999999999999999997
Q ss_pred H
Q 011508 462 Q 462 (484)
Q Consensus 462 ~ 462 (484)
.
T Consensus 291 ~ 291 (1431)
T KOG1240|consen 291 K 291 (1431)
T ss_pred h
Confidence 7
No 415
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.87 E-value=2.6e-22 Score=178.45 Aligned_cols=175 Identities=10% Similarity=0.079 Sum_probs=132.6
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHH---------HHHHHHHHHcCCCCCceeEeeeee
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKS---------FIAECQALRSIRHRNLVKIITSCV 228 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~---------~~~e~~~l~~l~h~niv~~~~~~~ 228 (484)
.++|+..++||.|+||.||.+.. ++..+|+|++.......... +.+|+..+.++.|++|..+..++.
T Consensus 30 ~~~y~~~~~l~~~~f~~v~l~~~----~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~ 105 (232)
T PRK10359 30 SYNIKTIKVFRNIDDTKVSLIDT----DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYL 105 (232)
T ss_pred hCceEEEEEecCCCceEEEEEec----CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeee
Confidence 57899999999999999999642 24579999997554333222 678999999999999999988755
Q ss_pred eecc---CCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecC
Q 011508 229 SVDF---QGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDG 305 (484)
Q Consensus 229 ~~~~---~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~ 305 (484)
.... ......++||||++|.+|.++.. ++. ....+++.++..+| ..+++|||++|+||+++.
T Consensus 106 ~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~--------~~~----~~~~~i~~~l~~lH---~~gi~H~Dikp~Nili~~ 170 (232)
T PRK10359 106 LAERKTLRYAHTYIMLIEYIEGVELNDMPE--------ISE----DVKAKIKASIESLH---QHGMVSGDPHKGNFIVSK 170 (232)
T ss_pred ecccccccccCCeEEEEEEECCccHHHhhh--------ccH----HHHHHHHHHHHHHH---HcCCccCCCChHHEEEeC
Confidence 3321 12346789999999999988742 222 24569999999999 999999999999999999
Q ss_pred CCceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHH
Q 011508 306 ELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMF 371 (484)
Q Consensus 306 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ell 371 (484)
++ ++|+|||......+.... ..+.....+..++|+||||+++..+.
T Consensus 171 ~g-i~liDfg~~~~~~e~~a~-------------------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 171 NG-LRIIDLSGKRCTAQRKAK-------------------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred CC-EEEEECCCcccccchhhH-------------------HHHHHHhHhcccccccceeEeehHHH
Confidence 88 999999988755221100 01233445667999999999987654
No 416
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.87 E-value=9.8e-22 Score=191.27 Aligned_cols=218 Identities=28% Similarity=0.435 Sum_probs=160.8
Q ss_pred HHcCCCCCceeEeeeeeeeccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCe
Q 011508 212 LRSIRHRNLVKIITSCVSVDFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPI 291 (484)
Q Consensus 212 l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i 291 (484)
|+.+.|.|+.+++|.+... ...++|.+||..|+|.+.+.. ....+++.....+.++|+.||+||| ..+|
T Consensus 1 l~~l~h~n~~~f~g~~~~~-----~~~~~i~~~c~rGsl~D~i~~---~~~~~d~~F~~s~~rdi~~Gl~ylh---~s~i 69 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDG-----PEMIVIWEYCSRGSLLDILSN---EDIKLDYFFILSFIRDISKGLAYLH---NSPI 69 (484)
T ss_pred CcccchhhhhhheeeEecC-----CceEEEEeeecCccHHhHHhc---cccCccHHHHHHHHHHHHHHHHHHh---cCcc
Confidence 4578999999999998654 478999999999999999974 3456999999999999999999999 4454
Q ss_pred -eecCCCCCCeeecCCCceEEcccCcccccccccccCCCCccccccccccccccCccccCCC-------CCCcccceehh
Q 011508 292 -VHCDLKPSNVLLDGELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGS-------EVSTSGDVYSF 363 (484)
Q Consensus 292 -vH~dlk~~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-------~~~~~~Dvws~ 363 (484)
.|+.++++|+++|....+||+|||+........ .........-..-|.|||.+... ..+.+.|||||
T Consensus 70 ~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~-----~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~ 144 (484)
T KOG1023|consen 70 GYHGALKSSNCLVDSRWVLKLTDFGLNSLLEETA-----EPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSF 144 (484)
T ss_pred eeeeeeccccceeeeeEEEEechhhhcccccccc-----cccccchhHHHHhccCHHHhcccccccccccccccCCeehH
Confidence 999999999999999999999999988764311 01111122345679999987763 14678999999
Q ss_pred hHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhh
Q 011508 364 GILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGV 443 (484)
Q Consensus 364 Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 443 (484)
|++++|+++.+.||+........ .+.+..... .-.....|.+.. ..+....+..++.
T Consensus 145 ~ii~~ei~~r~~~~~~~~~~~~~-~eii~~~~~-~~~~~~rP~i~~---------------------~~e~~~~l~~l~~ 201 (484)
T KOG1023|consen 145 GIIMYEILFRSGPFDLRNLVEDP-DEIILRVKK-GGSNPFRPSIEL---------------------LNELPPELLLLVA 201 (484)
T ss_pred HHHHHHHHhccCccccccccCCh-HHHHHHHHh-cCCCCcCcchhh---------------------hhhcchHHHHHHH
Confidence 99999999999999875433322 111111000 001111111110 0123447899999
Q ss_pred ccCCCCcCCCCCHHHHHHHHHHHHH
Q 011508 444 ICSSELPRERMNMEEVAAQLLSFRN 468 (484)
Q Consensus 444 ~cl~~dP~~RPt~~evl~~L~~i~~ 468 (484)
.||..+|.+||++++|-..++.+..
T Consensus 202 ~cw~e~P~~rPs~~~i~~~~~~~~~ 226 (484)
T KOG1023|consen 202 RCWEEIPEKRPSIEQIRSKLLTINK 226 (484)
T ss_pred HhcccChhhCccHHHHHhhhhhhcc
Confidence 9999999999999999988877654
No 417
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.85 E-value=3.1e-21 Score=169.93 Aligned_cols=139 Identities=15% Similarity=0.100 Sum_probs=105.7
Q ss_pred cCccccccceeEEEEEEcCCCCeeEEEEEEeeccCcc--c-------hH-----------------HHHHHHHHHHcCCC
Q 011508 164 ENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRG--A-------SK-----------------SFIAECQALRSIRH 217 (484)
Q Consensus 164 ~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~--~-------~~-----------------~~~~e~~~l~~l~h 217 (484)
...||+|++|.||+|... +++.||||+++..... . .. ....|++.+.++.+
T Consensus 2 ~~~ig~G~~~~Vy~a~~~---~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~ 78 (190)
T cd05147 2 NGCISTGKEANVYHATTA---NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVT 78 (190)
T ss_pred CCccccccceEEEEEECC---CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 468999999999999853 5789999999754221 1 01 12349999999988
Q ss_pred CCceeEeeeeeeeccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHH-HhcCCCCeeecCC
Q 011508 218 RNLVKIITSCVSVDFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYL-HHYCETPIVHCDL 296 (484)
Q Consensus 218 ~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~L-H~~~~~~ivH~dl 296 (484)
+++.....+. . . ..++||||++++++...... ...++......++.|++.+|.++ | +.+|+||||
T Consensus 79 ~~v~~p~~~~----~-~--~~~iVmE~i~g~~l~~~~~~----~~~~~~~~~~~i~~qi~~~L~~l~H---~~giiHrDl 144 (190)
T cd05147 79 AGIPCPEPIL----L-K--SHVLVMEFIGDDGWAAPRLK----DAPLSESKARELYLQVIQIMRILYQ---DCRLVHADL 144 (190)
T ss_pred CCCCCCcEEE----e-c--CCEEEEEEeCCCCCcchhhh----cCCCCHHHHHHHHHHHHHHHHHHHH---hCCcccCCC
Confidence 7764322221 1 1 23799999988777654321 23588899999999999999999 6 789999999
Q ss_pred CCCCeeecCCCceEEcccCccccc
Q 011508 297 KPSNVLLDGELTAHVSDFGLAKFL 320 (484)
Q Consensus 297 k~~NIll~~~~~~kl~Dfg~a~~~ 320 (484)
||+||+++ ++.++|+|||+|...
T Consensus 145 kP~NIli~-~~~v~LiDFG~a~~~ 167 (190)
T cd05147 145 SEYNLLYH-DGKLYIIDVSQSVEH 167 (190)
T ss_pred CHHHEEEE-CCcEEEEEccccccC
Confidence 99999998 478999999998754
No 418
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.84 E-value=6.4e-21 Score=174.63 Aligned_cols=237 Identities=19% Similarity=0.214 Sum_probs=147.2
Q ss_pred CccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc---cchHHHHHHHHHHHcCCC----------CCceeEeeeee
Q 011508 162 SLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR---GASKSFIAECQALRSIRH----------RNLVKIITSCV 228 (484)
Q Consensus 162 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h----------~niv~~~~~~~ 228 (484)
...+.||.|+++.||.++ +..++..+|+|++..... ...+++.+|.-....+.+ -.++.-++...
T Consensus 15 ~~~~~i~~g~~~~v~~v~--d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 15 VRGRIIGKGGFSIVFEVT--DVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEETTEEEEEEE--ETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEccccccCCceEEEEEE--EccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 456789999999999999 555788999999865442 233566666655544322 11111111111
Q ss_pred --------eeccCCCc-----eeeEEeecccCCCHHHHHhh---cCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCee
Q 011508 229 --------SVDFQGND-----FEALVYELMVNGSLEEWLHL---NRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIV 292 (484)
Q Consensus 229 --------~~~~~~~~-----~~~lv~e~~~~gsL~~~l~~---~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iv 292 (484)
... .+.. ..+++|+-+ .+||.+++.. .......+....++.+..|+.+.+++|| ..|++
T Consensus 93 i~~~~~~~~~~-~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh---~~GlV 167 (288)
T PF14531_consen 93 IPGKPPFFERG-PGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLH---SYGLV 167 (288)
T ss_dssp ETTS-SEEEEC-ETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTTEE
T ss_pred EcCCCcceecC-CCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHh---hcceE
Confidence 000 0011 235678877 6788887642 2222233556666778899999999999 89999
Q ss_pred ecCCCCCCeeecCCCceEEcccCcccccccccccCCCCccccccccccccccCccccCC--------CCCCcccceehhh
Q 011508 293 HCDLKPSNVLLDGELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG--------SEVSTSGDVYSFG 364 (484)
Q Consensus 293 H~dlk~~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~--------~~~~~~~Dvws~G 364 (484)
|+||+|+|++++.+|.++|+||+......... .. ...+..|.|||.... -.++.+.|.|++|
T Consensus 168 Hgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~---------~~-~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG 237 (288)
T PF14531_consen 168 HGDIKPENFLLDQDGGVFLGDFSSLVRAGTRY---------RC-SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLG 237 (288)
T ss_dssp EST-SGGGEEE-TTS-EEE--GGGEEETTEEE---------EG-GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHH
T ss_pred ecccceeeEEEcCCCCEEEcChHHHeecCcee---------ec-cCCCcccCChhhhhhhcccCcccceeeeccCHHHHH
Confidence 99999999999999999999998776543221 11 234577999996533 2578899999999
Q ss_pred HHHHHHHhCCCCCCCCccCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhc
Q 011508 365 ILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVI 444 (484)
Q Consensus 365 vvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 444 (484)
+++|.|++|..||+.......... ..... . +.+..+..|+..
T Consensus 238 ~~ly~lWC~~lPf~~~~~~~~~~~-------------~f~~C------------------------~-~~Pe~v~~LI~~ 279 (288)
T PF14531_consen 238 ITLYSLWCGRLPFGLSSPEADPEW-------------DFSRC------------------------R-DMPEPVQFLIRG 279 (288)
T ss_dssp HHHHHHHHSS-STCCCGGGSTSGG-------------GGTTS------------------------S----HHHHHHHHH
T ss_pred HHHHHHHHccCCCCCCCccccccc-------------cchhc------------------------C-CcCHHHHHHHHH
Confidence 999999999999976432211100 00000 0 226678899999
Q ss_pred cCCCCcCCC
Q 011508 445 CSSELPRER 453 (484)
Q Consensus 445 cl~~dP~~R 453 (484)
+|+++|.+|
T Consensus 280 lL~~~~~~R 288 (288)
T PF14531_consen 280 LLQRNPEDR 288 (288)
T ss_dssp HT-SSGGGS
T ss_pred HccCCcccC
Confidence 999999988
No 419
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.84 E-value=3.6e-20 Score=163.92 Aligned_cols=139 Identities=18% Similarity=0.128 Sum_probs=107.8
Q ss_pred cCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccc--------------------------hHHHHHHHHHHHcCCC
Q 011508 164 ENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGA--------------------------SKSFIAECQALRSIRH 217 (484)
Q Consensus 164 ~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~--------------------------~~~~~~e~~~l~~l~h 217 (484)
...||+|++|.||+|+.. +++.||||+++...... ...+..|.+.+.++.|
T Consensus 2 ~~~ig~G~~~~Vy~a~~~---~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~ 78 (190)
T cd05145 2 NGCISTGKEANVYHARTG---DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYE 78 (190)
T ss_pred CceeecCCCcEEEEEEcC---CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHh
Confidence 468999999999999844 67899999998643210 1123578999999999
Q ss_pred CCceeEeeeeeeeccCCCceeeEEeecccCCCHHHH-HhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC-CCeeecC
Q 011508 218 RNLVKIITSCVSVDFQGNDFEALVYELMVNGSLEEW-LHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCE-TPIVHCD 295 (484)
Q Consensus 218 ~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~-l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~d 295 (484)
+++.....+.. . ..++||||++++++... +.. ..++..+...++.|++.++.++| . .+|+|||
T Consensus 79 ~~i~~p~~~~~----~---~~~lVmE~~~g~~~~~~~l~~-----~~~~~~~~~~i~~~l~~~l~~lH---~~~givHrD 143 (190)
T cd05145 79 AGVPVPEPILL----K---KNVLVMEFIGDDGSPAPRLKD-----VPLEEEEAEELYEQVVEQMRRLY---QEAGLVHGD 143 (190)
T ss_pred CCCCCceEEEe----c---CCEEEEEEecCCCchhhhhhh-----ccCCHHHHHHHHHHHHHHHHHHH---HhCCEecCC
Confidence 98744333311 1 24799999988755433 321 24678889999999999999999 6 9999999
Q ss_pred CCCCCeeecCCCceEEcccCcccccc
Q 011508 296 LKPSNVLLDGELTAHVSDFGLAKFLP 321 (484)
Q Consensus 296 lk~~NIll~~~~~~kl~Dfg~a~~~~ 321 (484)
|||+||+++ ++.++|+|||++...+
T Consensus 144 lkP~NIll~-~~~~~liDFG~a~~~~ 168 (190)
T cd05145 144 LSEYNILYH-DGKPYIIDVSQAVELD 168 (190)
T ss_pred CChhhEEEE-CCCEEEEEcccceecC
Confidence 999999999 7899999999998653
No 420
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.82 E-value=7.1e-20 Score=159.17 Aligned_cols=192 Identities=16% Similarity=0.027 Sum_probs=134.7
Q ss_pred CCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccc----hHHHHHHHHHHHcCC-CCCceeEeeeeeeeccCCC
Q 011508 161 FSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGA----SKSFIAECQALRSIR-HRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 161 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~----~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~ 235 (484)
+.+...|++|+||+||.+.- .+.+++.+.+.....-. ...+.+|+++|++|. |+++.+++++.
T Consensus 4 ~~~~~~l~~~~f~~v~~~~~----~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~-------- 71 (218)
T PRK12274 4 PAVNEPLKSDTFGRILLVRG----GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHWD-------- 71 (218)
T ss_pred cccceeecCCCcceEEEeec----CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEc--------
Confidence 34567899999999997642 35677777776443211 124789999999995 57888888751
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCC-CCCCeeecCCCceEEccc
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDL-KPSNVLLDGELTAHVSDF 314 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl-k~~NIll~~~~~~kl~Df 314 (484)
..+++|||+.|.+|.+.+.. ....++.|++++|+++| ..+|+|||| ||+||+++.++.++|+||
T Consensus 72 -~~~lvmeyI~G~~L~~~~~~-----------~~~~~~~qi~~~L~~lH---~~GIvHrDL~kp~NILv~~~g~i~LIDF 136 (218)
T PRK12274 72 -GRHLDRSYLAGAAMYQRPPR-----------GDLAYFRAARRLLQQLH---RCGVAHNDLAKEANWLVQEDGSPAVIDF 136 (218)
T ss_pred -CEEEEEeeecCccHHhhhhh-----------hhHHHHHHHHHHHHHHH---HCcCccCCCCCcceEEEcCCCCEEEEEC
Confidence 45899999999998754320 11347789999999999 999999999 799999999999999999
Q ss_pred Cccccccccccc---CC-CCcc--ccccccccccccCccccCC--CCCCcccceehhhHHHHHHHhCCCCCCC
Q 011508 315 GLAKFLPEAANN---LS-SNQS--SSVGVKGTVGYAAPEYGMG--SEVSTSGDVYSFGILLLEMFTGKGPTNE 379 (484)
Q Consensus 315 g~a~~~~~~~~~---~~-~~~~--~~~~~~g~~~y~aPE~~~~--~~~~~~~Dvws~Gvvl~elltg~~p~~~ 379 (484)
|++......... .. .+.. .......++.|++|+...- ..--...+.++-|+-+|.++|+..+.-+
T Consensus 137 G~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~ 209 (218)
T PRK12274 137 QLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWE 209 (218)
T ss_pred CCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccc
Confidence 999865432210 00 0000 0011224666777764221 1222567889999999999999888644
No 421
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.82 E-value=6.2e-20 Score=190.90 Aligned_cols=198 Identities=24% Similarity=0.301 Sum_probs=153.3
Q ss_pred HHhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCC---CCCceeEeeeeeeec
Q 011508 155 FKATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIR---HRNLVKIITSCVSVD 231 (484)
Q Consensus 155 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~ 231 (484)
....+.|.+.+.||+|+||+||+|+.. + ++.||+|+-+.... .+|.--.+++.+|+ -+.|+.+...+.
T Consensus 694 ~~~~~~~~I~~e~G~g~y~~vy~a~~~--~-~~~~alK~e~P~~~---WEfYI~~q~~~RLk~~~~~~~~~~~~a~~--- 764 (974)
T KOG1166|consen 694 EVGGEKFCISKEIGEGSYGSVYVATHS--N-GKLVALKVEKPPNP---WEFYICLQVMERLKPQMLPSIMHISSAHV--- 764 (974)
T ss_pred eecceeEEEEeeeccccceEEEEeecC--C-CcEEEEEeecCCCc---eeeeehHHHHHhhchhhhcchHHHHHHHc---
Confidence 334467888999999999999999844 2 89999998764432 23333344555555 233444444432
Q ss_pred cCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeec-------
Q 011508 232 FQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLD------- 304 (484)
Q Consensus 232 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~------- 304 (484)
+. +.-++|+||.+.|+|.+++. ..+.++|.-++.++.|+++.++.|| ..+||||||||+|.+|.
T Consensus 765 ~~--~~S~lv~ey~~~Gtlld~~N----~~~~m~e~lv~~~~~qml~ive~lH---~~~IIHgDiKPDNfll~~~~~~~~ 835 (974)
T KOG1166|consen 765 FQ--NASVLVSEYSPYGTLLDLIN----TNKVMDEYLVMFFSCQMLRIVEHLH---AMGIIHGDIKPDNFLLRREICADS 835 (974)
T ss_pred cC--CcceeeeeccccccHHHhhc----cCCCCCchhhhHHHHHHHHHHHHHH---hcceecccCCcceeEeecccCCCC
Confidence 22 24579999999999999997 3456899999999999999999999 99999999999999993
Q ss_pred CCCceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCC
Q 011508 305 GELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKG 375 (484)
Q Consensus 305 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~ 375 (484)
+..-++|+|||.+..+.-- ..........+|-.+-.+|...+.+++..+|.|.++.+++-||.|+.
T Consensus 836 ~~~~l~lIDfG~siDm~lf-----p~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 836 DSKGLYLIDFGRSIDMKLF-----PDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred cccceEEEecccceeeeEc-----CCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 2346899999998765322 22334455678899999999999999999999999999999999984
No 422
>PRK10345 hypothetical protein; Provisional
Probab=99.81 E-value=4.2e-19 Score=157.64 Aligned_cols=139 Identities=17% Similarity=0.236 Sum_probs=104.3
Q ss_pred CccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcC-----CCCCceeEeeeeeeeccCCCc
Q 011508 162 SLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSI-----RHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 162 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-----~h~niv~~~~~~~~~~~~~~~ 236 (484)
.-.+.||+|+||.||. .++ +... +||++........+.+.+|+.+++.+ +||||++++|++.... +..
T Consensus 5 ~~~~~LG~G~~~~Vy~--hp~--~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~--g~g 77 (210)
T PRK10345 5 SEQSPLGTGRHRKCYA--HPE--DAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDC--GTG 77 (210)
T ss_pred CCcceecCCCceEEEE--CCC--CcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCC--CCe
Confidence 3457899999999995 332 3333 68988765445567899999999999 6799999999864321 112
Q ss_pred e-eeEEeec--ccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHH-HHHHhcCCCCeeecCCCCCCeeecC----CCc
Q 011508 237 F-EALVYEL--MVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTL-EYLHHYCETPIVHCDLKPSNVLLDG----ELT 308 (484)
Q Consensus 237 ~-~~lv~e~--~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l-~~LH~~~~~~ivH~dlk~~NIll~~----~~~ 308 (484)
. ..+|+|| +.+|+|.+++... .+++. ..++.+++.++ +||| +++|+||||||+||+++. +..
T Consensus 78 ~v~~~I~e~~G~~~~tL~~~l~~~-----~~~e~--~~~~~~~L~~l~~yLh---~~~IvhrDlKp~NILl~~~~~~~~~ 147 (210)
T PRK10345 78 YVYDVIADFDGKPSITLTEFAEQC-----RYEED--VAQLRQLLKKLKRYLL---DNRIVTMELKPQNILCQRISESEVI 147 (210)
T ss_pred EEEEEEecCCCCcchhHHHHHHcc-----cccHh--HHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEeccCCCCCc
Confidence 3 3478999 5579999999642 24444 35677888777 9999 999999999999999974 348
Q ss_pred eEEcccCcc
Q 011508 309 AHVSDFGLA 317 (484)
Q Consensus 309 ~kl~Dfg~a 317 (484)
++|+||+.+
T Consensus 148 ~~LiDg~G~ 156 (210)
T PRK10345 148 PVVCDNIGE 156 (210)
T ss_pred EEEEECCCC
Confidence 999995443
No 423
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.80 E-value=1.3e-20 Score=183.41 Aligned_cols=189 Identities=29% Similarity=0.314 Sum_probs=152.3
Q ss_pred ccccccceeEEEEEE-cCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCC-CCCceeEeeeeeeeccCCCceeeEE
Q 011508 166 LIGAGSFGSVYKGIF-DHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIR-HRNLVKIITSCVSVDFQGNDFEALV 241 (484)
Q Consensus 166 ~lg~G~~g~Vy~~~~-~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~lv 241 (484)
.+|+|+||.|+.+.- .....+..+|+|+.++... ........|-.++...+ ||.++++... ++.+...+++
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhya-----fqt~~kl~l~ 75 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYA-----FQTDGKLYLI 75 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeee-----eccccchhHh
Confidence 379999999997642 1223467789998865432 11124556778888886 9999998776 5566688999
Q ss_pred eecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcccccc
Q 011508 242 YELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFLP 321 (484)
Q Consensus 242 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~~ 321 (484)
+++..+|.|...+... ..+++.........++-+++++| +.+|+|||+|++||+++.+|++++.|||.++..-
T Consensus 76 ld~~rgg~lft~l~~~----~~f~~~~~~~~~aelaLald~lh---~l~iiyrd~k~enilld~~Ghi~~tdfglske~v 148 (612)
T KOG0603|consen 76 LDFLRGGDLFTRLSKE----VMFDELDVAFYLAELALALDHLH---KLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAV 148 (612)
T ss_pred hhhcccchhhhccccC----CchHHHHHHHHHHHHHHHHhhcc---hhHHHHhcccccceeecccCccccCCchhhhHhH
Confidence 9999999998887632 34677777888889999999999 9999999999999999999999999999998763
Q ss_pred cccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCC
Q 011508 322 EAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNE 379 (484)
Q Consensus 322 ~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~ 379 (484)
... ..+||..|||||+.. ......|.||||++++||+||..||..
T Consensus 149 ~~~-----------~~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~ 193 (612)
T KOG0603|consen 149 KEK-----------IACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG 193 (612)
T ss_pred hhh-----------hcccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch
Confidence 322 117999999999987 567899999999999999999999975
No 424
>smart00090 RIO RIO-like kinase.
Probab=99.76 E-value=5.4e-18 Score=154.48 Aligned_cols=150 Identities=18% Similarity=0.135 Sum_probs=111.8
Q ss_pred hHHHhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCcc------------------------chHHHHHH
Q 011508 153 NLFKATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRG------------------------ASKSFIAE 208 (484)
Q Consensus 153 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~------------------------~~~~~~~e 208 (484)
.+.....-|.+.+.||+|++|.||+|+. +..+++.||+|+++..... ....+..|
T Consensus 22 ~~~~~~~~~~i~~~Lg~G~~g~Vy~a~~-~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E 100 (237)
T smart00090 22 SLLNRGILSAIGGCISTGKEANVYHALD-FDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKE 100 (237)
T ss_pred HHHhcCchHHhCCeeccCcceeEEEEEe-cCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHH
Confidence 3444445688899999999999999972 1225788999998754211 01235689
Q ss_pred HHHHHcCCCCC--ceeEeeeeeeeccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhc
Q 011508 209 CQALRSIRHRN--LVKIITSCVSVDFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHY 286 (484)
Q Consensus 209 ~~~l~~l~h~n--iv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~ 286 (484)
+..+.++.+.. +.+++++ ...++||||+++.+|...... ...+.......++.|++.++++||
T Consensus 101 ~~~L~~L~~~~i~~p~~~~~---------~~~~lV~E~~~g~~L~~~~~~----~~~~~~~~~~~i~~qi~~~l~~LH-- 165 (237)
T smart00090 101 FRNLQRLYEAGVPVPKPIAW---------RRNVLVMEFIGGDGLPAPRLK----DVEPEEEEEFELYDDILEEMRKLY-- 165 (237)
T ss_pred HHHHHHHHhcCCCCCeeeEe---------cCceEEEEEecCCcccccccc----cCCcchHHHHHHHHHHHHHHHHHH--
Confidence 99999997533 3344432 134799999998888765421 123556667889999999999999
Q ss_pred CCCC-eeecCCCCCCeeecCCCceEEcccCccccc
Q 011508 287 CETP-IVHCDLKPSNVLLDGELTAHVSDFGLAKFL 320 (484)
Q Consensus 287 ~~~~-ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~ 320 (484)
..+ ++||||||+||+++ ++.++|+|||.+...
T Consensus 166 -~~g~iiH~Dikp~NIli~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 166 -KEGELVHGDLSEYNILVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred -hcCCEEeCCCChhhEEEE-CCCEEEEEChhhhcc
Confidence 889 99999999999999 789999999988754
No 425
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.76 E-value=2.1e-19 Score=171.74 Aligned_cols=129 Identities=28% Similarity=0.481 Sum_probs=108.7
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
.+.++.|++|...+|.+|+...+ .....++...+.++.|++.|+.| ++.+|+|+||.||++..+..+||+|||
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~-~~e~~s~s~~~~~~~q~~~~~~y------k~~ihrdlkp~nif~~~d~q~kIgDFg 401 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRR-TGEERSLSLMLDIFKQIAPAVEY------KGLIHRDLKPSNIFFSDDDQLKIGDFG 401 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCC-cccccchhHHHHHHHhhccchhh------ccchhhhccccccccccchhhhhhhhh
Confidence 36789999999999999997443 34457888899999999999998 688999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT 372 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt 372 (484)
+........ .............||..||+||.+.+..|+.|+||||+|++|+|+++
T Consensus 402 l~ts~~~~~-~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~ 457 (516)
T KOG1033|consen 402 LVTSQDKDE-TVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI 457 (516)
T ss_pred heeecccCC-cccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH
Confidence 987765443 11112234456789999999999999999999999999999999988
No 426
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.74 E-value=1.2e-17 Score=148.95 Aligned_cols=144 Identities=22% Similarity=0.185 Sum_probs=110.0
Q ss_pred HhHHHhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCcc----------------------chHHHHHHH
Q 011508 152 QNLFKATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRG----------------------ASKSFIAEC 209 (484)
Q Consensus 152 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~----------------------~~~~~~~e~ 209 (484)
+++.....-|.+.+.||+|+||.||++... +++.||||++...... ....+..|+
T Consensus 8 ~~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~ 84 (198)
T cd05144 8 HTLVKRGVVESLGNQIGVGKESDVYLALDP---DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEF 84 (198)
T ss_pred HHHHHcCchhhcCCccccCcceEEEEEEcC---CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHH
Confidence 344444445888899999999999999854 5788999987643210 012356788
Q ss_pred HHHHcCCCCC--ceeEeeeeeeeccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC
Q 011508 210 QALRSIRHRN--LVKIITSCVSVDFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYC 287 (484)
Q Consensus 210 ~~l~~l~h~n--iv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ 287 (484)
.++..+.|++ +.+.++. ...++||||+++++|...... .....++.+++.++.++|
T Consensus 85 ~~l~~l~~~~i~v~~~~~~---------~~~~lv~e~~~g~~L~~~~~~----------~~~~~~~~~i~~~l~~lh--- 142 (198)
T cd05144 85 AALKALYEEGFPVPKPIDW---------NRHAVVMEYIDGVELYRVRVL----------EDPEEVLDEILEEIVKAY--- 142 (198)
T ss_pred HHHHHHHHcCCCCCceeec---------CCceEEEEEeCCcchhhcccc----------ccHHHHHHHHHHHHHHHH---
Confidence 8999887774 4444332 245899999999998765420 234578899999999999
Q ss_pred CCCeeecCCCCCCeeecCCCceEEcccCccccc
Q 011508 288 ETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFL 320 (484)
Q Consensus 288 ~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~ 320 (484)
..+++||||||+||++++++.++|+|||.+...
T Consensus 143 ~~gi~H~Dl~p~Nill~~~~~~~liDfg~~~~~ 175 (198)
T cd05144 143 KHGIIHGDLSEFNILVDDDEKIYIIDWPQMVST 175 (198)
T ss_pred HCCCCcCCCCcccEEEcCCCcEEEEECCccccC
Confidence 899999999999999999999999999998654
No 427
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.74 E-value=1.9e-17 Score=149.59 Aligned_cols=134 Identities=22% Similarity=0.305 Sum_probs=107.6
Q ss_pred CccccccceeEEEEEEcCCCCeeEEEEEEeeccCcc--------chHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCc
Q 011508 165 NLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRG--------ASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 165 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
+.||+|++|.||+|.+. +..+++|+....... ....+.+|++++..+.|+++.....++.. ..
T Consensus 2 ~~l~~G~~~~vy~~~~~----~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~-----~~ 72 (211)
T PRK14879 2 KLIKRGAEAEIYLGDFL----GIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVD-----PE 72 (211)
T ss_pred cccccCceEEEEEEeeC----CCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEe-----CC
Confidence 57999999999999853 456888876533221 11357789999999999988766655432 23
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCc
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGL 316 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 316 (484)
..++||||++|++|.+++... .. .+..++.+++.+|.++| ..+++|||++|.||+++ ++.++|+|||.
T Consensus 73 ~~~lv~e~~~G~~L~~~~~~~-------~~-~~~~i~~~i~~~l~~lH---~~~i~H~Dl~p~Nil~~-~~~~~liDf~~ 140 (211)
T PRK14879 73 NFIIVMEYIEGEPLKDLINSN-------GM-EELELSREIGRLVGKLH---SAGIIHGDLTTSNMILS-GGKIYLIDFGL 140 (211)
T ss_pred CCEEEEEEeCCcCHHHHHHhc-------cH-HHHHHHHHHHHHHHHHH---hCCcccCCCCcccEEEE-CCCEEEEECCc
Confidence 568999999999999998632 12 78889999999999999 89999999999999999 78899999998
Q ss_pred ccc
Q 011508 317 AKF 319 (484)
Q Consensus 317 a~~ 319 (484)
+..
T Consensus 141 a~~ 143 (211)
T PRK14879 141 AEF 143 (211)
T ss_pred ccC
Confidence 764
No 428
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.73 E-value=2.1e-17 Score=169.53 Aligned_cols=140 Identities=22% Similarity=0.265 Sum_probs=108.1
Q ss_pred HhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeecc--Cc------cchHHHHHHHHHHHcCCCCCceeEeeee
Q 011508 156 KATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQ--HR------GASKSFIAECQALRSIRHRNLVKIITSC 227 (484)
Q Consensus 156 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~--~~------~~~~~~~~e~~~l~~l~h~niv~~~~~~ 227 (484)
.....|...+.||+|+||.||+|.+... .+++|+.... .. ...+.+.+|++++..++|++++....++
T Consensus 330 ~~~~~~~~~~~iG~G~~g~Vy~~~~~~~----~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~ 405 (535)
T PRK09605 330 EVKRRKIPDHLIGKGAEADIKKGEYLGR----DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYD 405 (535)
T ss_pred ccccccCccceeccCCcEEEEEEeecCc----cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEE
Confidence 3344566789999999999999986532 2333332111 11 1124688999999999999988776664
Q ss_pred eeeccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCC
Q 011508 228 VSVDFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGEL 307 (484)
Q Consensus 228 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~ 307 (484)
.. ....++||||+++++|.+++. ....++.+++++|.+|| +.+++||||||+||++ +++
T Consensus 406 ~~-----~~~~~lv~E~~~g~~L~~~l~------------~~~~~~~~i~~~L~~lH---~~giiHrDlkp~NILl-~~~ 464 (535)
T PRK09605 406 VD-----PEEKTIVMEYIGGKDLKDVLE------------GNPELVRKVGEIVAKLH---KAGIVHGDLTTSNFIV-RDD 464 (535)
T ss_pred Ee-----CCCCEEEEEecCCCcHHHHHH------------HHHHHHHHHHHHHHHHH---hCCCccCCCChHHEEE-ECC
Confidence 32 235689999999999999885 34678999999999999 8999999999999999 577
Q ss_pred ceEEcccCccccc
Q 011508 308 TAHVSDFGLAKFL 320 (484)
Q Consensus 308 ~~kl~Dfg~a~~~ 320 (484)
.++|+|||+++..
T Consensus 465 ~~~liDFGla~~~ 477 (535)
T PRK09605 465 RLYLIDFGLGKYS 477 (535)
T ss_pred cEEEEeCcccccC
Confidence 9999999998753
No 429
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.72 E-value=3.3e-17 Score=146.52 Aligned_cols=130 Identities=22% Similarity=0.291 Sum_probs=101.2
Q ss_pred ccccccceeEEEEEEcCCCCeeEEEEEEeeccCcc--------chHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 166 LIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRG--------ASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 166 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
.||+|+||.||+|.+. +..+++|........ ....+.+|++++..+.|+++.....++.. ...
T Consensus 1 ~ig~G~~~~vy~~~~~----~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~-----~~~ 71 (199)
T TIGR03724 1 LIAKGAEAIIYLGDFL----GLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVD-----PDN 71 (199)
T ss_pred CCCCCceEEEEEeecC----CccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE-----CCC
Confidence 4899999999999843 467888886532211 12457789999999988875444333322 235
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
.++||||++|++|.+++.... . .++.+++.+|++|| ..+++|||++|.||+++ ++.++++|||++
T Consensus 72 ~~lv~e~~~g~~l~~~~~~~~--------~---~~~~~i~~~l~~lH---~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a 136 (199)
T TIGR03724 72 KTIVMEYIEGKPLKDVIEEGN--------D---ELLREIGRLVGKLH---KAGIVHGDLTTSNIIVR-DDKLYLIDFGLG 136 (199)
T ss_pred CEEEEEEECCccHHHHHhhcH--------H---HHHHHHHHHHHHHH---HCCeecCCCCcceEEEE-CCcEEEEECCCC
Confidence 689999999999999875211 0 78999999999999 89999999999999999 789999999988
Q ss_pred cc
Q 011508 318 KF 319 (484)
Q Consensus 318 ~~ 319 (484)
..
T Consensus 137 ~~ 138 (199)
T TIGR03724 137 KY 138 (199)
T ss_pred cC
Confidence 64
No 430
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.69 E-value=1.1e-17 Score=171.04 Aligned_cols=216 Identities=26% Similarity=0.345 Sum_probs=141.0
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
..+|..+++|..|+||.||.++ ++.+.+.+|+|+ +++. . +++ ||..+-+ +
T Consensus 82 e~df~~IklisngAygavylvr--h~~trqrfa~ki-Nkq~-----l------ilR-----nilt~a~---------n-- 131 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVR--HKETRQRFAMKI-NKQN-----L------ILR-----NILTFAG---------N-- 131 (1205)
T ss_pred ccccceeEeeccCCCCceeeee--ccccccchhhcc-cccc-----h------hhh-----ccccccC---------C--
Confidence 3678899999999999999998 555667888843 2221 0 111 1222211 1
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
.+.| |+-...++.. ..++. +++.+++||| +.+|+|||+||+|.+|+.-|++|+.|||++
T Consensus 132 pfvv------gDc~tllk~~----g~lPv--------dmvla~Eylh---~ygivhrdlkpdnllIT~mGhiKlTDfgLs 190 (1205)
T KOG0606|consen 132 PFVV------GDCATLLKNI----GPLPV--------DMVLAVEYLH---SYGIVHRDLKPDNLLITSMGHIKLTDFGLS 190 (1205)
T ss_pred ccee------chhhhhcccC----CCCcc--------hhhHHhHhhc---cCCeecCCCCCCcceeeecccccccchhhh
Confidence 1222 3333334321 12222 2278899999 999999999999999999999999999998
Q ss_pred ccccccccc------CC--CCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhH
Q 011508 318 KFLPEAANN------LS--SNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHN 389 (484)
Q Consensus 318 ~~~~~~~~~------~~--~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~ 389 (484)
+..-..... +. ..+-.....+||+.|+|||++....|+...|.|++|+++||.+-|+.||.+...++ .+.+
T Consensus 191 k~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpee-lfg~ 269 (1205)
T KOG0606|consen 191 KKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEE-LFGQ 269 (1205)
T ss_pred hhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHH-HHhh
Confidence 754221110 00 00111124589999999999999999999999999999999999999997742221 1111
Q ss_pred HHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCC
Q 011508 390 FVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMN 455 (484)
Q Consensus 390 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt 455 (484)
.+...+ .. +++ .+....+..+++...|+.+|..|--
T Consensus 270 visd~i------------~w-pE~-----------------dea~p~Ea~dli~~LL~qnp~~Rlg 305 (1205)
T KOG0606|consen 270 VISDDI------------EW-PEE-----------------DEALPPEAQDLIEQLLRQNPLCRLG 305 (1205)
T ss_pred hhhhhc------------cc-ccc-----------------CcCCCHHHHHHHHHHHHhChHhhcc
Confidence 111110 00 000 1112567788999999999999963
No 431
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.64 E-value=1.2e-15 Score=135.04 Aligned_cols=135 Identities=22% Similarity=0.218 Sum_probs=94.6
Q ss_pred cCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccch--HH----------------------HHHHHHHHHcCCCCC
Q 011508 164 ENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGAS--KS----------------------FIAECQALRSIRHRN 219 (484)
Q Consensus 164 ~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~--~~----------------------~~~e~~~l~~l~h~n 219 (484)
.+.||+|+||+||+|... ++..||||++........ .. ...|.+.+.++.+..
T Consensus 2 ~~~lg~G~~g~Vy~a~~~---~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~ 78 (187)
T cd05119 2 GGPIGTGKEADVYLALDG---DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAG 78 (187)
T ss_pred CcccccccceeEEEEECC---CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcC
Confidence 468999999999999854 567899999875432111 11 124555555554332
Q ss_pred --ceeEeeeeeeeccCCCceeeEEeecccCCCHHH-HHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC-CCeeecC
Q 011508 220 --LVKIITSCVSVDFQGNDFEALVYELMVNGSLEE-WLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCE-TPIVHCD 295 (484)
Q Consensus 220 --iv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~d 295 (484)
+.+.++. ...++||||++++++.. .+.... .. .+...++.+++.++.++| . .+|+|+|
T Consensus 79 ~~~~~~~~~---------~~~~lv~e~~~g~~~~~~~l~~~~-----~~-~~~~~~~~~~~~~l~~lh---~~~~ivH~D 140 (187)
T cd05119 79 VPVPKPIDL---------NRHVLVMEFIGGDGIPAPRLKDVR-----LL-EDPEELYDQILELMRKLY---REAGLVHGD 140 (187)
T ss_pred CCCCceEec---------CCCEEEEEEeCCCCccChhhhhhh-----hc-ccHHHHHHHHHHHHHHHh---hccCcCcCC
Confidence 3333332 13589999999854321 111100 11 567789999999999999 7 9999999
Q ss_pred CCCCCeeecCCCceEEcccCccccc
Q 011508 296 LKPSNVLLDGELTAHVSDFGLAKFL 320 (484)
Q Consensus 296 lk~~NIll~~~~~~kl~Dfg~a~~~ 320 (484)
|||+||+++ ++.++|+|||.+...
T Consensus 141 l~p~Nili~-~~~~~liDfg~a~~~ 164 (187)
T cd05119 141 LSEYNILVD-DGKVYIIDVPQAVEI 164 (187)
T ss_pred CChhhEEEE-CCcEEEEECcccccc
Confidence 999999999 889999999998754
No 432
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.64 E-value=2e-15 Score=128.51 Aligned_cols=136 Identities=21% Similarity=0.240 Sum_probs=109.6
Q ss_pred ccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCC--CCceeEeeeeeeeccCCCceeeE
Q 011508 163 LENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRH--RNLVKIITSCVSVDFQGNDFEAL 240 (484)
Q Consensus 163 ~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~~~~~~~~~~~~~~~~~~l 240 (484)
+.+.||+|.++.||++... +..+++|....... ...+.+|+.++..++| .++.+++++. ...+..++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~----~~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~-----~~~~~~~~ 70 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTK----DEDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASG-----ESDGWSYL 70 (155)
T ss_pred cceecccccccceEEEEec----CCeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEc-----CCCCccEE
Confidence 4578999999999999854 25689998865433 4578899999999976 4888887763 33357899
Q ss_pred EeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccccc
Q 011508 241 VYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFL 320 (484)
Q Consensus 241 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~ 320 (484)
++||++++.+..+ +......++.++++++++||.....+++|+|++|+||++++.+.+++.|||.+...
T Consensus 71 v~e~~~g~~~~~~-----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~ 139 (155)
T cd05120 71 LMEWIEGETLDEV-----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYG 139 (155)
T ss_pred EEEecCCeecccC-----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCC
Confidence 9999988776543 45567778999999999999554468999999999999999899999999988754
No 433
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.61 E-value=1e-15 Score=137.82 Aligned_cols=163 Identities=23% Similarity=0.362 Sum_probs=126.9
Q ss_pred HHHHHcCCCCCceeEeeeeeeeccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC
Q 011508 209 CQALRSIRHRNLVKIITSCVSVDFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCE 288 (484)
Q Consensus 209 ~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~ 288 (484)
..-|-++.|.||+++..|..+..+.+.....++.|||.-|++.++|++.......+......+|+.||..||.|||+. +
T Consensus 118 FdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~-~ 196 (458)
T KOG1266|consen 118 FDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSC-D 196 (458)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhcc-C
Confidence 344556689999999999877766677778899999999999999998777777788888999999999999999987 8
Q ss_pred CCeeecCCCCCCeeecCCCceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHH
Q 011508 289 TPIVHCDLKPSNVLLDGELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLL 368 (484)
Q Consensus 289 ~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ 368 (484)
..|+|+++..+-|++..++-+|++--.-..... ..+ ...........+-++|.|||+-.....+..+|||+||...+
T Consensus 197 PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~-s~~--~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAl 273 (458)
T KOG1266|consen 197 PPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHP-SVN--STREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCAL 273 (458)
T ss_pred CccccCCcchhheeecCCceEEecccCccccch-hhh--hhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHH
Confidence 999999999999999999988884321111110 000 00111112234678999999887778888999999999999
Q ss_pred HHHhCCC
Q 011508 369 EMFTGKG 375 (484)
Q Consensus 369 elltg~~ 375 (484)
||..+..
T Consensus 274 emailEi 280 (458)
T KOG1266|consen 274 EMAILEI 280 (458)
T ss_pred HHHHhee
Confidence 9988764
No 434
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.61 E-value=6.2e-15 Score=134.66 Aligned_cols=139 Identities=17% Similarity=0.132 Sum_probs=102.7
Q ss_pred Cccc-cccceeEEEEEEcCCCCeeEEEEEEeeccC-------------ccchHHHHHHHHHHHcCCCCCc--eeEeeeee
Q 011508 165 NLIG-AGSFGSVYKGIFDHDDHETLVAVKVLNLQH-------------RGASKSFIAECQALRSIRHRNL--VKIITSCV 228 (484)
Q Consensus 165 ~~lg-~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~-------------~~~~~~~~~e~~~l~~l~h~ni--v~~~~~~~ 228 (484)
..|| .|+.|+||.+... +..++||.+.... ......+.+|++++.++.|+++ ++.+++..
T Consensus 37 ~~lg~~~g~gtv~~v~~~----~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~ 112 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP----GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARV 112 (239)
T ss_pred ceeecCCCCccEEEEEeC----CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeee
Confidence 5677 8888999988753 4568888875321 0122467889999999998875 66666543
Q ss_pred eeccCCCceeeEEeecccC-CCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCC
Q 011508 229 SVDFQGNDFEALVYELMVN-GSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGEL 307 (484)
Q Consensus 229 ~~~~~~~~~~~lv~e~~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~ 307 (484)
... ......++|||++++ .+|.+++... .++.. .+.+++.++.+|| ..||+||||||.|||++.++
T Consensus 113 ~~~-~~~~~~~lV~e~l~G~~~L~~~l~~~-----~l~~~----~~~~i~~~l~~lH---~~GI~HrDlkp~NILv~~~~ 179 (239)
T PRK01723 113 VRH-GLFYRADILIERIEGARDLVALLQEA-----PLSEE----QWQAIGQLIARFH---DAGVYHADLNAHNILLDPDG 179 (239)
T ss_pred eec-CcceeeeEEEEecCCCCCHHHHHhcC-----CCCHH----HHHHHHHHHHHHH---HCCCCCCCCCchhEEEcCCC
Confidence 211 111123599999997 6999888631 24443 3578999999999 99999999999999999988
Q ss_pred ceEEcccCccccc
Q 011508 308 TAHVSDFGLAKFL 320 (484)
Q Consensus 308 ~~kl~Dfg~a~~~ 320 (484)
.++|+|||.+...
T Consensus 180 ~v~LIDfg~~~~~ 192 (239)
T PRK01723 180 KFWLIDFDRGELR 192 (239)
T ss_pred CEEEEECCCcccC
Confidence 9999999988753
No 435
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.61 E-value=1.2e-16 Score=163.25 Aligned_cols=259 Identities=25% Similarity=0.267 Sum_probs=187.6
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC--ccchHHHHHHHHHHHcCC-CCCceeEeeeeeeeccCCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH--RGASKSFIAECQALRSIR-HRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~ 235 (484)
..|.+.+.||+|+|+.|-...... .....+|+|.+.... ....+....|..+-..+. |+|++.+++. ..+.
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~-~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~-----~~~~ 93 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSR-DPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEP-----SSSP 93 (601)
T ss_pred ccccccccccccccchhhhhhhcC-CCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCc-----cCCC
Confidence 457778889999999998876432 234567777765443 222344556777777776 9999999987 4556
Q ss_pred ceeeEEeecccCCCHHHHH-hhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCC-ceEEcc
Q 011508 236 DFEALVYELMVNGSLEEWL-HLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGEL-TAHVSD 313 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l-~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~-~~kl~D 313 (484)
...+++.+|..++++.+.+ .... ...+....-.++.|+..++.|+|. ..++.|+|+||+|.+++..+ ..+++|
T Consensus 94 ~~~~~~~~~s~g~~~f~~i~~~~~---~~~~~~~~~~~~~ql~s~l~~~H~--~~~~~h~~ikP~n~~l~~s~~~l~~~d 168 (601)
T KOG0590|consen 94 RSYLLSLSYSDGGSLFSKISHPDS---TGTSSSSASRYLPQLNSGLSYLHP--ENGVTHRDIKPSNSLLDESGSALKIAD 168 (601)
T ss_pred cccccccCcccccccccccccCCc---cCCCCcchhhhhhhhccCccccCc--ccccccCCCCCccchhccCCCcccCCC
Confidence 6889999999999998877 3211 135566677889999999999996 67899999999999999999 999999
Q ss_pred cCcccccccccccCCCCccccccccc-cccccCccccCCC-CCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHH
Q 011508 314 FGLAKFLPEAANNLSSNQSSSVGVKG-TVGYAAPEYGMGS-EVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFV 391 (484)
Q Consensus 314 fg~a~~~~~~~~~~~~~~~~~~~~~g-~~~y~aPE~~~~~-~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 391 (484)
||+|..+.... +........+| ++.|.|||...+. ...+..|+||.|+++.-+++|..||............|.
T Consensus 169 f~~At~~~~~~----g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~ 244 (601)
T KOG0590|consen 169 FGLATAYRNKN----GAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWK 244 (601)
T ss_pred chhhccccccC----CcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeec
Confidence 99998775421 12223334567 9999999998874 557789999999999999999999976544433322222
Q ss_pred HhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 392 KEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 392 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
...... . ............++...++..+|..|.+.+++-.
T Consensus 245 ~~~~~~----------~-------------------~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~ 285 (601)
T KOG0590|consen 245 SNKGRF----------T-------------------QLPWNSISDQAHDLLHKILKENPSNRLSIEELKL 285 (601)
T ss_pred cccccc----------c-------------------cCccccCChhhhhcccccccCCchhccccccccc
Confidence 211000 0 0001112445678888899999999999888753
No 436
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.47 E-value=2.3e-13 Score=135.10 Aligned_cols=143 Identities=22% Similarity=0.230 Sum_probs=97.9
Q ss_pred cCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccch----------------------------------------H
Q 011508 164 ENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGAS----------------------------------------K 203 (484)
Q Consensus 164 ~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~----------------------------------------~ 203 (484)
.+.||.|++|.||+|++. +|+.||||+.+....... -
T Consensus 122 ~~plasaSigQVh~A~l~---~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~El 198 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLV---DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRREL 198 (437)
T ss_pred CcceeeeehhheEEEEec---CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHH
Confidence 368999999999999976 468899999864321100 0
Q ss_pred HHHHHHHHHHcC----CCCCceeEeeeeeeeccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHH-
Q 011508 204 SFIAECQALRSI----RHRNLVKIITSCVSVDFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVAS- 278 (484)
Q Consensus 204 ~~~~e~~~l~~l----~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~- 278 (484)
+|.+|.+.+.++ +|.+-+.+-..+. ......++||||++|++|.++...... .. .+..++.+++.
T Consensus 199 df~~Ea~n~~~~~~~~~~~~~v~vP~v~~----~~~~~~vLvmE~i~G~~L~~~~~~~~~---~~---~~~~ia~~~~~~ 268 (437)
T TIGR01982 199 DLRREAANASELGENFKNDPGVYVPEVYW----DRTSERVLTMEWIDGIPLSDIAALDEA---GL---DRKALAENLARS 268 (437)
T ss_pred CHHHHHHHHHHHHHhcCCCCCEEeCCEeh----hhcCCceEEEEeECCcccccHHHHHhc---CC---CHHHHHHHHHHH
Confidence 244455555544 2333333333321 122346899999999999887653211 12 23456666665
Q ss_pred HHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccccccc
Q 011508 279 TLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFLPE 322 (484)
Q Consensus 279 ~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~~~ 322 (484)
.+..+| ..+++|+|++|.||++++++.++++|||++..++.
T Consensus 269 ~l~ql~---~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 269 FLNQVL---RDGFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred HHHHHH---hCCceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence 467788 89999999999999999999999999999987643
No 437
>PLN03150 hypothetical protein; Provisional
Probab=99.44 E-value=8.7e-14 Score=144.49 Aligned_cols=81 Identities=40% Similarity=0.658 Sum_probs=48.0
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccc--cccccCcccccCCCccc
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIK--GVFSNSSAISLDGNVNL 78 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~--~~~~~~~~~~~~~n~~l 78 (484)
|++|+|+|.+|.++++|++|+.|||++|+|+|.+|..+++|++|+.|+|++|+|+|.+|.. ..+.++..+++.+|+.+
T Consensus 449 Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~~~~~~~~l~~~~N~~l 528 (623)
T PLN03150 449 LSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRASFNFTDNAGL 528 (623)
T ss_pred CCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCChHHhhccccCceEEecCCccc
Confidence 3556666666666666666666666666666666666666666666666666666666643 11223445566666666
Q ss_pred cCC
Q 011508 79 CGG 81 (484)
Q Consensus 79 ~g~ 81 (484)
||.
T Consensus 529 c~~ 531 (623)
T PLN03150 529 CGI 531 (623)
T ss_pred cCC
Confidence 664
No 438
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.42 E-value=2.7e-13 Score=132.67 Aligned_cols=204 Identities=28% Similarity=0.339 Sum_probs=153.8
Q ss_pred CCCccCcccc--ccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcC-CCCCceeEeeeeeeeccCC
Q 011508 160 GFSLENLIGA--GSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSI-RHRNLVKIITSCVSVDFQG 234 (484)
Q Consensus 160 ~~~~~~~lg~--G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 234 (484)
.|.+...+|. |.+|.||.+......+...+|+|.-+.... .....=.+|+....++ .|+|.++.... +.+
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~-----~e~ 189 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPA-----WEG 189 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcc-----ccc
Confidence 4566788999 999999999864455677899987443322 2233445666666666 58898885555 566
Q ss_pred CceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHH----HHHHHHhcCCCCeeecCCCCCCeeecCC-Cce
Q 011508 235 NDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVAS----TLEYLHHYCETPIVHCDLKPSNVLLDGE-LTA 309 (484)
Q Consensus 235 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~----~l~~LH~~~~~~ivH~dlk~~NIll~~~-~~~ 309 (484)
.+..++-+|++ +.+|.++.+... ..++....+.+..+..+ ||.++| ...++|-|+||.||+...+ ...
T Consensus 190 ~~~lfiqtE~~-~~sl~~~~~~~~---~~~p~~~l~~~~~~~~~~~~~al~~~h---s~~~~~~~~kp~~i~~~~~~~s~ 262 (524)
T KOG0601|consen 190 SGILFIQTELC-GESLQSYCHTPC---NFLPDNLLWNSLRDWLSRDVTALSHLH---SNNIVHDDLKPANIFTTSDWTSC 262 (524)
T ss_pred CCcceeeeccc-cchhHHhhhccc---ccCCchhhhhHHhhhhhcccccccccC---CCcccccccchhheeccccccee
Confidence 77889999998 678888876332 23667777888888888 999999 9999999999999999999 899
Q ss_pred EEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCC
Q 011508 310 HVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTN 378 (484)
Q Consensus 310 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~ 378 (484)
+++|||+...+....- ...........|...|++||...+ .++..+|||++|.+..+..++..+..
T Consensus 263 ~~~df~~v~~i~~~~~--~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~ 328 (524)
T KOG0601|consen 263 KLTDFGLVSKISDGNF--SSVFKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPS 328 (524)
T ss_pred ecCCcceeEEccCCcc--ccceeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhccccc
Confidence 9999999887754431 111111223357888999998654 67899999999999999999877653
No 439
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.37 E-value=1e-11 Score=122.83 Aligned_cols=166 Identities=19% Similarity=0.193 Sum_probs=122.9
Q ss_pred CeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCceeeEEeecccCCCHHHHHhhcCCCCCCC
Q 011508 185 HETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNL 264 (484)
Q Consensus 185 ~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l 264 (484)
++.+|.|...+...........+.++.|+.++||||++++.. +..+...|+|+|.+. -|..+++. +
T Consensus 36 ~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t-----~e~~~~~ylvTErV~--Pl~~~lk~-------l 101 (690)
T KOG1243|consen 36 DGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDT-----TEEEGTLYLVTERVR--PLETVLKE-------L 101 (690)
T ss_pred cCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhh-----hcccCceEEEeeccc--cHHHHHHH-------h
Confidence 456788887776554445667888999999999999999988 455558999999984 46777763 3
Q ss_pred CHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcccccccccccCCCCcccccccccccccc
Q 011508 265 NLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYA 344 (484)
Q Consensus 265 ~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~ 344 (484)
....+...+.||+.||.|||+ +.+++|++|.-+.|++++.|..||++|.++...+.... ......--..|.
T Consensus 102 ~~~~v~~Gl~qIl~AL~FL~~--d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~-------~~~~~~~~~s~~ 172 (690)
T KOG1243|consen 102 GKEEVCLGLFQILAALSFLND--DCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA-------PAKSLYLIESFD 172 (690)
T ss_pred HHHHHHHHHHHHHHHHHHHhc--cCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc-------ccccchhhhccc
Confidence 356677788999999999986 78999999999999999999999999988764422110 000111223355
Q ss_pred CccccCCCCCCcccceehhhHHHHHHHhCCC
Q 011508 345 APEYGMGSEVSTSGDVYSFGILLLEMFTGKG 375 (484)
Q Consensus 345 aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~ 375 (484)
.|+.+.... -..|.|.|||+++|++.|..
T Consensus 173 ~P~~~~~s~--~s~D~~~Lg~li~el~ng~~ 201 (690)
T KOG1243|consen 173 DPEEIDPSE--WSIDSWGLGCLIEELFNGSL 201 (690)
T ss_pred ChhhcCccc--cchhhhhHHHHHHHHhCccc
Confidence 666433322 34699999999999999943
No 440
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.32 E-value=5.4e-12 Score=109.68 Aligned_cols=128 Identities=17% Similarity=0.145 Sum_probs=93.2
Q ss_pred cCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCcee-EeeeeeeeccCCCceeeEEe
Q 011508 164 ENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVK-IITSCVSVDFQGNDFEALVY 242 (484)
Q Consensus 164 ~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~-~~~~~~~~~~~~~~~~~lv~ 242 (484)
.+.|+.|.++.||++... +..+++|+...... ....+.+|+.+++.+.+.++++ ++.+. ....++||
T Consensus 3 ~~~l~~G~~~~vy~~~~~----~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~-------~~~~~lv~ 70 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA----NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD-------PETGVLIT 70 (170)
T ss_pred eeecCCcccCceEEEEEC----CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe-------CCCCeEEE
Confidence 357899999999999854 56799998754322 2235678999999886555443 44331 11347999
Q ss_pred ecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC-----eeecCCCCCCeeecCCCceEEcccCcc
Q 011508 243 ELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETP-----IVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 243 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~-----ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
||+++.++.+.- . ....++.+++++|+.|| ..+ ++|+|++|.||+++ ++.++++||+.+
T Consensus 71 e~i~G~~l~~~~---------~---~~~~~~~~l~~~l~~LH---~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a 134 (170)
T cd05151 71 EFIEGSELLTED---------F---SDPENLEKIAKLLKKLH---SSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYA 134 (170)
T ss_pred EecCCCcccccc---------c---cCHHHHHHHHHHHHHHh---CCCCCCceeecCCCCcCcEEEE-CCeEEEEecccc
Confidence 999998775420 1 11235678999999999 555 59999999999999 568999999987
Q ss_pred cc
Q 011508 318 KF 319 (484)
Q Consensus 318 ~~ 319 (484)
..
T Consensus 135 ~~ 136 (170)
T cd05151 135 GM 136 (170)
T ss_pred cC
Confidence 63
No 441
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.28 E-value=6.6e-11 Score=103.29 Aligned_cols=139 Identities=19% Similarity=0.161 Sum_probs=96.9
Q ss_pred cCccccccceeEEEEEEcCCC----CeeEEEEEEeeccCc----------------------cchHHHH----HHHHHHH
Q 011508 164 ENLIGAGSFGSVYKGIFDHDD----HETLVAVKVLNLQHR----------------------GASKSFI----AECQALR 213 (484)
Q Consensus 164 ~~~lg~G~~g~Vy~~~~~~~~----~~~~vavK~~~~~~~----------------------~~~~~~~----~e~~~l~ 213 (484)
...||.|--+.||.|.-.+.. .+..+|||+.+.... ...+.+. +|.+.|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 357999999999999743211 346899999863210 0012233 7999999
Q ss_pred cCCC--CCceeEeeeeeeeccCCCceeeEEeecccCCCHHH-HHhhcCCCCCCCCHHHHHHHHHHHHHHHHHH-HhcCCC
Q 011508 214 SIRH--RNLVKIITSCVSVDFQGNDFEALVYELMVNGSLEE-WLHLNRDAPRNLNLLQRLSIAVDVASTLEYL-HHYCET 289 (484)
Q Consensus 214 ~l~h--~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~L-H~~~~~ 289 (484)
++.. -++.+.+++ ...++||||+.+..+.. .++. ..++..+...+..+++.+|..| | ..
T Consensus 82 rl~~~Gv~vP~pi~~---------~~~~lvME~Ig~~~~~~~~Lkd-----~~~~~~~~~~i~~~i~~~l~~l~H---~~ 144 (197)
T cd05146 82 RMQKAGIPCPEVVVL---------KKHVLVMSFIGDDQVPAPKLKD-----AKLNDEEMKNAYYQVLSMMKQLYK---EC 144 (197)
T ss_pred HHHHcCCCCCeEEEe---------cCCEEEEEEcCCCCccchhhhc-----cccCHHHHHHHHHHHHHHHHHHHH---hC
Confidence 8843 355555543 14589999996643321 2221 1244556677889999999998 7 88
Q ss_pred CeeecCCCCCCeeecCCCceEEcccCccccc
Q 011508 290 PIVHCDLKPSNVLLDGELTAHVSDFGLAKFL 320 (484)
Q Consensus 290 ~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~ 320 (484)
+++||||++.||++++ +.+.|+|||.+...
T Consensus 145 glVHGDLs~~NIL~~~-~~v~iIDF~qav~~ 174 (197)
T cd05146 145 NLVHADLSEYNMLWHD-GKVWFIDVSQSVEP 174 (197)
T ss_pred CeecCCCCHHHEEEEC-CcEEEEECCCceeC
Confidence 9999999999999974 67999999988754
No 442
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.28 E-value=1.1e-11 Score=124.54 Aligned_cols=148 Identities=16% Similarity=0.223 Sum_probs=92.0
Q ss_pred CCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccc----------------------------------hH--
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGA----------------------------------SK-- 203 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~----------------------------------~~-- 203 (484)
.|+. +.||+|++|.||+|++.+ +|+.||||+.+...... .+
T Consensus 121 ~fd~-~PlasaSiaQVh~A~l~~--~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 121 DFDI-KPLASASIAQVHFARLKD--NGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred hcCh-hhhcCCCccEEEEEEECC--CCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 4665 789999999999999763 37889999997442100 01
Q ss_pred ----HHHHHHHHHHcCC----CCCceeEeeeeeeeccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHH
Q 011508 204 ----SFIAECQALRSIR----HRNLVKIITSCVSVDFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVD 275 (484)
Q Consensus 204 ----~~~~e~~~l~~l~----h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ 275 (484)
++.+|...+.+++ +.+.+.+-..+ .+-....++||||++|+.+.++-.... ...+. ..++..
T Consensus 198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~----~d~st~~VLvmE~i~G~~l~d~~~l~~---~g~d~---~~la~~ 267 (537)
T PRK04750 198 HDELDLMREAANASQLRRNFEDSDMLYVPEVY----WDYCSETVMVMERMYGIPVSDVAALRA---AGTDM---KLLAER 267 (537)
T ss_pred HHhhCHHHHHHHHHHHHHHccCCCCeecceee----cccCCCceEEEeeecCccHHhHHHHHh---cCCCH---HHHHHH
Confidence 1334444444442 33333322222 111335689999999999987532111 11111 112222
Q ss_pred HHHH-HHHHHhcCCCCeeecCCCCCCeeecCCC----ceEEcccCcccccccc
Q 011508 276 VAST-LEYLHHYCETPIVHCDLKPSNVLLDGEL----TAHVSDFGLAKFLPEA 323 (484)
Q Consensus 276 i~~~-l~~LH~~~~~~ivH~dlk~~NIll~~~~----~~kl~Dfg~a~~~~~~ 323 (484)
.+.. +..++ ..|++|+|+||.||+++.++ .+++.|||++..++..
T Consensus 268 ~v~~~~~Qif---~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~~ 317 (537)
T PRK04750 268 GVEVFFTQVF---RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNKE 317 (537)
T ss_pred HHHHHHHHHH---hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCHH
Confidence 2221 22234 68999999999999999888 9999999999887554
No 443
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=99.26 E-value=2.9e-10 Score=106.60 Aligned_cols=280 Identities=15% Similarity=0.135 Sum_probs=169.8
Q ss_pred CCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcC-CCCCceeEeeeeee--eccCCCce
Q 011508 161 FSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSI-RHRNLVKIITSCVS--VDFQGNDF 237 (484)
Q Consensus 161 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~--~~~~~~~~ 237 (484)
......||+|+-+.+|..- .-...+.|++......... +.+..|... .||-+-.-+.+-.. .+-.....
T Consensus 13 i~~gr~LgqGgea~ly~l~-----e~~d~VAKIYh~Pppa~~a---qk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~ 84 (637)
T COG4248 13 IPPGRPLGQGGEADLYTLG-----EVRDQVAKIYHAPPPAAQA---QKVAELAATPDAPLLNYRVAWPQATLHGGRRGKV 84 (637)
T ss_pred cCCCccccCCccceeeecc-----hhhchhheeecCCCchHHH---HHHHHhccCCCCcchhhhhcccHHHhhCCCccce
Confidence 3556889999999999643 1222455777654432222 223334444 55543321111000 00122233
Q ss_pred eeEEeecccCC-CHHHHHhh--cCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEccc
Q 011508 238 EALVYELMVNG-SLEEWLHL--NRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDF 314 (484)
Q Consensus 238 ~~lv~e~~~~g-sL~~~l~~--~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 314 (484)
..+.|+.+++. -...+... .+..-....|...++.++.++.+.+.|| ..|.+-||+.++|+|+++++.+.|.|-
T Consensus 85 iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH---~~Gh~vGDVn~~~~lVsd~~~V~LVds 161 (637)
T COG4248 85 IGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLH---EHGHVVGDVNQNSFLVSDDSKVVLVDS 161 (637)
T ss_pred eEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHH---hcCCcccccCccceeeecCceEEEEcc
Confidence 67788887664 22222221 1222345789999999999999999999 899999999999999999999999986
Q ss_pred CcccccccccccCCCCccccccccccccccCccccC-----CCCCCcccceehhhHHHHHHHhC-CCCCCCCccCCccHh
Q 011508 315 GLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGM-----GSEVSTSGDVYSFGILLLEMFTG-KGPTNEMFTGNLTLH 388 (484)
Q Consensus 315 g~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dvws~Gvvl~elltg-~~p~~~~~~~~~~~~ 388 (484)
..-... .+.......+|...|.+||.-. +-.-+...|.|.+|+++++++.| ++||.+......
T Consensus 162 Dsfqi~--------~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~--- 230 (637)
T COG4248 162 DSFQIN--------ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISD--- 230 (637)
T ss_pred cceeec--------cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCC---
Confidence 543332 1122334457889999999643 33457789999999999999885 999987532211
Q ss_pred HHHHhhcchhhh-hhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCC--CcCCCCCHHHHHHHHHH
Q 011508 389 NFVKEALPERLA-EIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSE--LPRERMNMEEVAAQLLS 465 (484)
Q Consensus 389 ~~~~~~~~~~~~-~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~--dP~~RPt~~evl~~L~~ 465 (484)
.+.... ++..-.+....+. ....++...+....-.+..+..+..+|+.. +|.-|||++.++..|..
T Consensus 231 ------ap~p~E~~Ia~g~f~ya~~~-----~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~a 299 (637)
T COG4248 231 ------APNPLETDIAHGRFAYASDQ-----RRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDA 299 (637)
T ss_pred ------CCCcchhhhhcceeeechhc-----cCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHH
Confidence 000011 1111111000000 000111112222233356677788888775 36799999999999999
Q ss_pred HHHHHhhc
Q 011508 466 FRNKLVKN 473 (484)
Q Consensus 466 i~~~~~~~ 473 (484)
+++++.+=
T Consensus 300 l~~~L~~C 307 (637)
T COG4248 300 LRQQLKKC 307 (637)
T ss_pred HHHhhhhh
Confidence 99888643
No 444
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.20 E-value=2.3e-11 Score=119.26 Aligned_cols=252 Identities=19% Similarity=0.155 Sum_probs=169.0
Q ss_pred hcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHH--HHHHHHHHHcC-CCCCceeEeeeeeeeccC
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKS--FIAECQALRSI-RHRNLVKIITSCVSVDFQ 233 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~--~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 233 (484)
-..+|..+..||.|.|+.|+.... ...++..|++|.+.........+ -..|+.+...+ .|.+++..... +.
T Consensus 263 ~~~df~~v~~i~~~~~~~~~~~~~-r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~-----W~ 336 (524)
T KOG0601|consen 263 KLTDFGLVSKISDGNFSSVFKVSK-RPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSS-----WS 336 (524)
T ss_pred ecCCcceeEEccCCccccceeeee-cCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCC-----cc
Confidence 345788899999999999999873 33457789999876554333222 23455555555 57777776554 23
Q ss_pred CCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCC-CceEEc
Q 011508 234 GNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGE-LTAHVS 312 (484)
Q Consensus 234 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~-~~~kl~ 312 (484)
.....++=-|||+++++...+. ....+++..++++..|++.++.++| ++.++|+|+||+||++..+ +..+++
T Consensus 337 ~~r~~~ip~e~~~~~s~~l~~~----~~~~~d~~~~~~~~~q~~~~l~~i~---s~~~~~~d~~psni~i~~~~~~~~~~ 409 (524)
T KOG0601|consen 337 QLRQGYIPLEFCEGGSSSLRSV----TSQMLDEDPRLRLTAQILTALNVIH---SKLFVHLDVKPSNILISNDGFFSKLG 409 (524)
T ss_pred ccccccCchhhhcCcchhhhhH----HHHhcCcchhhhhHHHHHhcccccc---chhhhcccccccceeeccchhhhhcc
Confidence 3345678889999998876652 2334777888999999999999999 9999999999999999886 788999
Q ss_pred ccCcccccccccccCCCCccccccccccccc-cCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHH
Q 011508 313 DFGLAKFLPEAANNLSSNQSSSVGVKGTVGY-AAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFV 391 (484)
Q Consensus 313 Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y-~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 391 (484)
|||++..+.-.. ......+..| .+|+......+..+.|+||||..+.|..++..--... .. |.
T Consensus 410 ~~~~~t~~~~~~---------~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~-~~------~~ 473 (524)
T KOG0601|consen 410 DFGCWTRLAFSS---------GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESG-VQ------SL 473 (524)
T ss_pred ccccccccceec---------ccccccccccccchhhccccccccccccccccccccccccCcccCccc-cc------ce
Confidence 999986432111 0011123333 3555666677889999999999999999987532210 00 00
Q ss_pred HhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHH
Q 011508 392 KEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFR 467 (484)
Q Consensus 392 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~ 467 (484)
.+....... ......++..+...+..+++..||.+.+.....+..+
T Consensus 474 ---------~i~~~~~p~---------------------~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~~ 519 (524)
T KOG0601|consen 474 ---------TIRSGDTPN---------------------LPGLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFYR 519 (524)
T ss_pred ---------eeecccccC---------------------CCchHHhhhhhhhhhcCCccccchhhhhhcccchhhh
Confidence 000000000 0011245666777788899999999888766555443
No 445
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.18 E-value=2.5e-10 Score=96.03 Aligned_cols=129 Identities=26% Similarity=0.311 Sum_probs=92.8
Q ss_pred CccccccceeEEEEEEcCCCCeeEEEEEEeeccC-ccc-------hHHHHHHHHHHHcCCCCCc--eeEeeeeeeeccCC
Q 011508 165 NLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH-RGA-------SKSFIAECQALRSIRHRNL--VKIITSCVSVDFQG 234 (484)
Q Consensus 165 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~-~~~-------~~~~~~e~~~l~~l~h~ni--v~~~~~~~~~~~~~ 234 (484)
..+++|+-+.+|.+.+. +..+++|.-.... ... ...-.+|.+++.+++--.| ..++.+ +
T Consensus 2 ~~i~~GAEa~i~~~~~~----g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dv-------D 70 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL----GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDV-------D 70 (204)
T ss_pred chhhCCcceeEEeeecc----CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEE-------c
Confidence 46889999999999764 3346666432221 111 1346689999988854333 233332 2
Q ss_pred CceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEccc
Q 011508 235 NDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDF 314 (484)
Q Consensus 235 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 314 (484)
.+...|+|||++|..|.+.+... ...++..+-.-+.-|| ..+|+|+||.++||+++++. +.++||
T Consensus 71 ~~~~~I~me~I~G~~lkd~l~~~-----------~~~~~r~vG~~vg~lH---~~givHGDLTtsNiIl~~~~-i~~IDf 135 (204)
T COG3642 71 PDNGLIVMEYIEGELLKDALEEA-----------RPDLLREVGRLVGKLH---KAGIVHGDLTTSNIILSGGR-IYFIDF 135 (204)
T ss_pred CCCCEEEEEEeCChhHHHHHHhc-----------chHHHHHHHHHHHHHH---hcCeecCCCccceEEEeCCc-EEEEEC
Confidence 23557999999999999888632 2456777888888999 99999999999999998764 999999
Q ss_pred Ccccc
Q 011508 315 GLAKF 319 (484)
Q Consensus 315 g~a~~ 319 (484)
|++..
T Consensus 136 GLg~~ 140 (204)
T COG3642 136 GLGEF 140 (204)
T ss_pred Ccccc
Confidence 99874
No 446
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.12 E-value=7.5e-10 Score=92.69 Aligned_cols=143 Identities=20% Similarity=0.245 Sum_probs=98.0
Q ss_pred ccCccccccceeEEEEEEcCCCCeeEEEEEE-eeccCcc-------chHHHHHHHHHHHcCCCCCceeEeeeeeeeccCC
Q 011508 163 LENLIGAGSFGSVYKGIFDHDDHETLVAVKV-LNLQHRG-------ASKSFIAECQALRSIRHRNLVKIITSCVSVDFQG 234 (484)
Q Consensus 163 ~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~-~~~~~~~-------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 234 (484)
....|-+|+-+.|+++.+. ++...||. +.+.-+. ...+..+|.++|.++.--.|.-..-++. +
T Consensus 11 ~l~likQGAEArv~~~~~~----Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~-----D 81 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS----GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFI-----D 81 (229)
T ss_pred cceeeeccceeeEeeeccC----CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEE-----e
Confidence 4578899999999999875 55566663 3322111 1245678999998885333322111221 2
Q ss_pred CceeeEEeecccC-CCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCC---ceE
Q 011508 235 NDFEALVYELMVN-GSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGEL---TAH 310 (484)
Q Consensus 235 ~~~~~lv~e~~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~---~~k 310 (484)
...-.|+|||+++ .++.+++....... ........++..|-+.+.-|| ..+|+||||..+||++..++ .+.
T Consensus 82 ~~~~~i~ME~~~g~~~vk~~i~~~~~~~--~~d~~~~~~~~~iG~~igklH---~ndiiHGDLTTSNill~~~~~~~~~~ 156 (229)
T KOG3087|consen 82 TYGGQIYMEFIDGASTVKDFILSTMEDE--SEDEGLAELARRIGELIGKLH---DNDIIHGDLTTSNILLRSDGNQITPI 156 (229)
T ss_pred cCCCeEEEEeccchhHHHHHHHHHccCc--ccchhHHHHHHHHHHHHHHhh---hCCeecccccccceEEecCCCcCceE
Confidence 2245799999966 48888887543221 222333678889999999999 99999999999999996554 568
Q ss_pred EcccCcccc
Q 011508 311 VSDFGLAKF 319 (484)
Q Consensus 311 l~Dfg~a~~ 319 (484)
++|||++..
T Consensus 157 lIdfgls~~ 165 (229)
T KOG3087|consen 157 LIDFGLSSV 165 (229)
T ss_pred EEeecchhc
Confidence 999998864
No 447
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.10 E-value=8.8e-10 Score=100.20 Aligned_cols=146 Identities=20% Similarity=0.182 Sum_probs=105.8
Q ss_pred CccccccceeEEEEEEcCCCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCC--CceeEeeeeeeeccCCCceeeEE
Q 011508 165 NLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHR--NLVKIITSCVSVDFQGNDFEALV 241 (484)
Q Consensus 165 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~--niv~~~~~~~~~~~~~~~~~~lv 241 (484)
+.|+.|.++.||+++..+ +..+++|....... .....+.+|.++++.+.+. ++.+++.+..... ..+..++|
T Consensus 4 ~~l~~G~~n~~~~v~~~~---g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~--~~~~~~~v 78 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGG---GRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPS--VLGTPFYV 78 (223)
T ss_pred eecCCCccceEEEEEecC---CcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCC--ccCCceEE
Confidence 568999999999998542 46789998764332 1345788999999999653 3566666532211 11245899
Q ss_pred eecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC----------------------------------
Q 011508 242 YELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYC---------------------------------- 287 (484)
Q Consensus 242 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---------------------------------- 287 (484)
|||++|.++.+.+.. ..++..+...++.+++++|+.||+..
T Consensus 79 ~e~i~G~~l~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (223)
T cd05154 79 MERVDGRVLRDRLLR-----PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDE 153 (223)
T ss_pred EEEeCCEecCCCCCC-----CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccc
Confidence 999999888765421 23667777788888888888888421
Q ss_pred -------------------CCCeeecCCCCCCeeecC--CCceEEcccCccccc
Q 011508 288 -------------------ETPIVHCDLKPSNVLLDG--ELTAHVSDFGLAKFL 320 (484)
Q Consensus 288 -------------------~~~ivH~dlk~~NIll~~--~~~~kl~Dfg~a~~~ 320 (484)
...++|+|+++.||+++. ++.+.|+||+.+...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~g 207 (223)
T cd05154 154 PPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATLG 207 (223)
T ss_pred cHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccccC
Confidence 245799999999999998 567899999987653
No 448
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.09 E-value=6.1e-11 Score=122.55 Aligned_cols=210 Identities=26% Similarity=0.306 Sum_probs=140.6
Q ss_pred hcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccC
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQ 233 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 233 (484)
..+.+.+.+.+-+|+++.++.+. ....+...++|+..... ....+....+-.++-..++|-++..... +.
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~--pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s-----~~ 874 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPAS--PAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPS-----FP 874 (1205)
T ss_pred CCccceecccccCCCCcccccCC--ccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCC-----CC
Confidence 45677888889999999999876 33334344444433211 1112222222222222334444433222 23
Q ss_pred CCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcc
Q 011508 234 GNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSD 313 (484)
Q Consensus 234 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~D 313 (484)
-....+++++|..+++|...++.-. ..+..-.......+.+++++|| ...+.|+|++|.|++...++..+++|
T Consensus 875 ~rsP~~L~~~~~~~~~~~Skl~~~~----~~saepaRs~i~~~vqs~e~L~---s~~r~h~~~~p~~~l~~~~gh~~l~~ 947 (1205)
T KOG0606|consen 875 CRSPLPLVGHYLNGGDLPSKLHNSG----CLSAEPARSPILERVQSLESLH---SSLRKHRDLKPDSLLIAYDGHRPLTD 947 (1205)
T ss_pred CCCCcchhhHHhccCCchhhhhcCC----CcccccccchhHHHHhhhhccc---cchhhcccccccchhhcccCCcccCc
Confidence 3446789999999999999887433 2343344455667888999999 77799999999999999999999999
Q ss_pred cCcccccccccc--------c---------------C-CCCccccccccccccccCccccCCCCCCcccceehhhHHHHH
Q 011508 314 FGLAKFLPEAAN--------N---------------L-SSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLE 369 (484)
Q Consensus 314 fg~a~~~~~~~~--------~---------------~-~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~e 369 (484)
||.......... . . ...........+|+.|.+||...+......+|.|++|++++|
T Consensus 948 ~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e 1027 (1205)
T KOG0606|consen 948 FGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFE 1027 (1205)
T ss_pred cccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhh
Confidence 984332211100 0 0 000012234578999999999999999999999999999999
Q ss_pred HHhCCCCCCCC
Q 011508 370 MFTGKGPTNEM 380 (484)
Q Consensus 370 lltg~~p~~~~ 380 (484)
.++|..||...
T Consensus 1028 ~l~g~pp~na~ 1038 (1205)
T KOG0606|consen 1028 VLTGIPPFNAE 1038 (1205)
T ss_pred hhcCCCCCCCc
Confidence 99999999864
No 449
>PLN03150 hypothetical protein; Provisional
Probab=99.07 E-value=1.1e-10 Score=121.42 Aligned_cols=82 Identities=33% Similarity=0.662 Sum_probs=76.1
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccc-cccccCcccccCCCcccc
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIK-GVFSNSSAISLDGNVNLC 79 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n~~l~ 79 (484)
|++|+|+|.+|.++++|++|+.|+|++|+|+|.+|..+++|++|+.|||++|+|+|.+|.. +.+.+|+.+++++| .+.
T Consensus 425 L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N-~l~ 503 (623)
T PLN03150 425 LDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGN-SLS 503 (623)
T ss_pred CCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCC-ccc
Confidence 6789999999999999999999999999999999999999999999999999999999874 78899999999999 566
Q ss_pred CCCc
Q 011508 80 GGIS 83 (484)
Q Consensus 80 g~~~ 83 (484)
|..|
T Consensus 504 g~iP 507 (623)
T PLN03150 504 GRVP 507 (623)
T ss_pred ccCC
Confidence 6554
No 450
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=99.04 E-value=6.4e-09 Score=100.25 Aligned_cols=175 Identities=19% Similarity=0.225 Sum_probs=130.6
Q ss_pred cceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCceeeEEeecccC-CC
Q 011508 171 SFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFEALVYELMVN-GS 249 (484)
Q Consensus 171 ~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~-gs 249 (484)
-..+.|++. ...+|..|++|+++............-+++++++.|.|+|++..++.... .++.-.++||+|.++ ++
T Consensus 288 ~~~Ttyk~~--s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~t-F~D~SlvlvYDYyP~s~T 364 (655)
T KOG3741|consen 288 FSITTYKAT--SNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYT-FGDLSLVLVYDYYPSSPT 364 (655)
T ss_pred ccceeEeee--eccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhc-cCcceEEEEEecCCCCch
Confidence 446788988 45567889999995443333333445678999999999999999876443 345568899999986 57
Q ss_pred HHHHHhhcC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccc
Q 011508 250 LEEWLHLNR-----------DAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAK 318 (484)
Q Consensus 250 L~~~l~~~~-----------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~ 318 (484)
|.++-.... ..+...++...|.++.|+..||.++| +.|+.-+-|.+.+|+++++.+++|+..|...
T Consensus 365 L~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIH---ssGLAck~L~~~kIlv~G~~RIriS~C~i~D 441 (655)
T KOG3741|consen 365 LYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIH---SSGLACKTLDLKKILVTGKMRIRISGCGIMD 441 (655)
T ss_pred HHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHH---hcCceeecccHhHeEeeCcceEEEeccccee
Confidence 777653221 22345788999999999999999999 8999999999999999999999998888776
Q ss_pred ccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCC
Q 011508 319 FLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKG 375 (484)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~ 375 (484)
.+..+. . |-+ .--.+-|.=.||.+++.|.||..
T Consensus 442 vl~~d~-------------------~--~~l---e~~Qq~D~~~lG~ll~aLAt~~~ 474 (655)
T KOG3741|consen 442 VLQEDP-------------------T--EPL---ESQQQNDLRDLGLLLLALATGTE 474 (655)
T ss_pred eecCCC-------------------C--cch---hHHhhhhHHHHHHHHHHHhhccc
Confidence 653321 0 001 11246788899999999999964
No 451
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=99.00 E-value=3.9e-09 Score=91.91 Aligned_cols=125 Identities=22% Similarity=0.222 Sum_probs=79.1
Q ss_pred eEEEEEEcCCCCeeEEEEEEeeccCc-------------c---------c----hHHHHHHHHHHHcCCCC--CceeEee
Q 011508 174 SVYKGIFDHDDHETLVAVKVLNLQHR-------------G---------A----SKSFIAECQALRSIRHR--NLVKIIT 225 (484)
Q Consensus 174 ~Vy~~~~~~~~~~~~vavK~~~~~~~-------------~---------~----~~~~~~e~~~l~~l~h~--niv~~~~ 225 (484)
.||.|... ++..+|+|+.+.... . . .....+|.+.|.++... ++.+.+.
T Consensus 1 ~Vy~~~~~---~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~ 77 (188)
T PF01163_consen 1 DVYHAIDP---DGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYD 77 (188)
T ss_dssp EEEEEEEC---TTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEE
T ss_pred CEEEEECC---CCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEE
Confidence 38888754 467899998863210 0 0 13467899999999765 4556654
Q ss_pred eeeeeccCCCceeeEEeeccc--CCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHH-HHhcCCCCeeecCCCCCCee
Q 011508 226 SCVSVDFQGNDFEALVYELMV--NGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEY-LHHYCETPIVHCDLKPSNVL 302 (484)
Q Consensus 226 ~~~~~~~~~~~~~~lv~e~~~--~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~-LH~~~~~~ivH~dlk~~NIl 302 (484)
+- ...+||||++ |..+..+.... ++......++.+++..+.. +| ..+|+||||.+.||+
T Consensus 78 ~~---------~~~ivME~I~~~G~~~~~l~~~~------~~~~~~~~~~~~il~~~~~~~~---~~givHGDLs~~NIl 139 (188)
T PF01163_consen 78 YN---------RNVIVMEYIGEDGVPLPRLKDVD------LSPEEPKELLEEILEEIIKMLH---KAGIVHGDLSEYNIL 139 (188)
T ss_dssp EE---------TTEEEEE--EETTEEGGCHHHCG------GGGSTHHHHHHHHHHHHHHHHH---CTTEEESS-STTSEE
T ss_pred Ee---------CCEEEEEecCCCccchhhHHhcc------ccchhHHHHHHHHHHHHHHHHH---hcCceecCCChhhEE
Confidence 41 3479999998 54444433211 1123445677788885555 57 899999999999999
Q ss_pred ecCCCceEEcccCccccc
Q 011508 303 LDGELTAHVSDFGLAKFL 320 (484)
Q Consensus 303 l~~~~~~kl~Dfg~a~~~ 320 (484)
++++ .+.|+|||.+...
T Consensus 140 v~~~-~~~iIDf~qav~~ 156 (188)
T PF01163_consen 140 VDDG-KVYIIDFGQAVDS 156 (188)
T ss_dssp EETT-CEEE--GTTEEET
T ss_pred eecc-eEEEEecCcceec
Confidence 9988 9999999988654
No 452
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=98.99 E-value=4e-10 Score=125.03 Aligned_cols=82 Identities=37% Similarity=0.650 Sum_probs=68.3
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccc-cccccCcccccCCCcccc
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIK-GVFSNSSAISLDGNVNLC 79 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n~~l~ 79 (484)
|++|+++|.+|.++++|++|+.|+|++|+++|.+|..+.++++|+.|+|++|+++|.+|.. ..+.+++.+++++| .+.
T Consensus 506 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N-~l~ 584 (968)
T PLN00113 506 LSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHN-HLH 584 (968)
T ss_pred CcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCC-cce
Confidence 5788888888888888899999999999999889988888999999999999998888864 56778888899988 455
Q ss_pred CCCc
Q 011508 80 GGIS 83 (484)
Q Consensus 80 g~~~ 83 (484)
|..|
T Consensus 585 ~~~p 588 (968)
T PLN00113 585 GSLP 588 (968)
T ss_pred eeCC
Confidence 5443
No 453
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.98 E-value=1.4e-08 Score=93.92 Aligned_cols=145 Identities=14% Similarity=0.022 Sum_probs=97.3
Q ss_pred ccccccceeEEEEEEcCCCCeeEEEEEEeeccCcc-----------chHHHHHHHHHHHcCCCCC--ceeEeeeeeeecc
Q 011508 166 LIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRG-----------ASKSFIAECQALRSIRHRN--LVKIITSCVSVDF 232 (484)
Q Consensus 166 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~-----------~~~~~~~e~~~l~~l~h~n--iv~~~~~~~~~~~ 232 (484)
.+-.-....|++..+. ++.+.||........ ....+.+|...+.++...+ ..+.+++......
T Consensus 29 ~v~~~~~rrvvr~~~~----g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~ 104 (268)
T PRK15123 29 VFRELEGRRTLRFELA----GKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSN 104 (268)
T ss_pred EEecCCCceEEEEEEC----CEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCC
Confidence 3333344456676654 467999976432211 1114778888888884333 3334444322111
Q ss_pred CCCceeeEEeecccCC-CHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecC------
Q 011508 233 QGNDFEALVYELMVNG-SLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDG------ 305 (484)
Q Consensus 233 ~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~------ 305 (484)
......++|+|++++. +|.+++.... ....+...+..++.+++..++-|| ..||+|+|++++|||++.
T Consensus 105 ~~~~~s~LVte~l~~~~sL~~~~~~~~--~~~~~~~~~~~ll~~la~~i~~LH---~~Gi~HgDL~~~NiLl~~~~~~~~ 179 (268)
T PRK15123 105 PATRTSFIITEDLAPTISLEDYCADWA--TNPPDPRLKRMLIKRVATMVRDMH---AAGINHRDCYICHFLLHLPFPGRE 179 (268)
T ss_pred CccceeEEEEeeCCCCccHHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHH---HCcCccCCCChhhEEEeccccCCC
Confidence 1123568999999876 8999885322 123456677789999999999999 999999999999999975
Q ss_pred -CCceEEcccCcccc
Q 011508 306 -ELTAHVSDFGLAKF 319 (484)
Q Consensus 306 -~~~~kl~Dfg~a~~ 319 (484)
+..+.++||+.+..
T Consensus 180 ~~~~~~LIDl~r~~~ 194 (268)
T PRK15123 180 EDLKLSVIDLHRAQI 194 (268)
T ss_pred CCceEEEEECCcccc
Confidence 46899999997753
No 454
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.86 E-value=1.7e-08 Score=90.37 Aligned_cols=135 Identities=24% Similarity=0.186 Sum_probs=98.0
Q ss_pred CCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc----------------c------chHHHHHHHHHHHcCCCC
Q 011508 161 FSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR----------------G------ASKSFIAECQALRSIRHR 218 (484)
Q Consensus 161 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~----------------~------~~~~~~~e~~~l~~l~h~ 218 (484)
..+++.||-|--+.||.|..+ .+..+|||.=+.... . ......+|.++|.+|...
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~---~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~ 169 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDP---KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPE 169 (304)
T ss_pred HhhccccccCccceEEEEECC---CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhc
Confidence 456789999999999999854 578899996542210 0 013467899999999654
Q ss_pred --CceeEeeeeeeeccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCC
Q 011508 219 --NLVKIITSCVSVDFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDL 296 (484)
Q Consensus 219 --niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl 296 (484)
.+.+.+++ +...+|||+++|--|...- ++....-.++..|+.-+..+- ..||||||+
T Consensus 170 G~~VP~P~~~---------nRHaVvMe~ieG~eL~~~r---------~~~en~~~il~~il~~~~~~~---~~GiVHGDl 228 (304)
T COG0478 170 GVKVPKPIAW---------NRHAVVMEYIEGVELYRLR---------LDVENPDEILDKILEEVRKAY---RRGIVHGDL 228 (304)
T ss_pred CCCCCCcccc---------ccceeeeehcccceeeccc---------CcccCHHHHHHHHHHHHHHHH---HcCccccCC
Confidence 56665554 3568999999886554321 123344456666776666666 689999999
Q ss_pred CCCCeeecCCCceEEcccCcccc
Q 011508 297 KPSNVLLDGELTAHVSDFGLAKF 319 (484)
Q Consensus 297 k~~NIll~~~~~~kl~Dfg~a~~ 319 (484)
++-||++++||.+.++||-.+..
T Consensus 229 SefNIlV~~dg~~~vIDwPQ~v~ 251 (304)
T COG0478 229 SEFNILVTEDGDIVVIDWPQAVP 251 (304)
T ss_pred chheEEEecCCCEEEEeCccccc
Confidence 99999999999999999976653
No 455
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=98.84 E-value=6.6e-10 Score=91.44 Aligned_cols=77 Identities=26% Similarity=0.420 Sum_probs=70.5
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccccccccCcccccCCCccccC
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIKGVFSNSSAISLDGNVNLCG 80 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~l~g 80 (484)
||+|+|+ .+|+.|+.|.+|+.|++++|+++ .+|.+++.|+.|+.|+++-|+|.-.+-..+.|+-++.+++..| +|..
T Consensus 40 LSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~~lprgfgs~p~levldltyn-nl~e 116 (264)
T KOG0617|consen 40 LSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLNILPRGFGSFPALEVLDLTYN-NLNE 116 (264)
T ss_pred cccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhhcCccccCCCchhhhhhcccc-cccc
Confidence 6899999 99999999999999999999999 9999999999999999999999977777799999999999999 5543
No 456
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.81 E-value=8.1e-08 Score=85.90 Aligned_cols=110 Identities=23% Similarity=0.265 Sum_probs=82.6
Q ss_pred HHHHHHHHHHHcCCCC--CceeEeeeeeeeccCCCceeeEEeecccCC-CHHHHHhhcCCCCCCCCHHHHHHHHHHHHHH
Q 011508 203 KSFIAECQALRSIRHR--NLVKIITSCVSVDFQGNDFEALVYELMVNG-SLEEWLHLNRDAPRNLNLLQRLSIAVDVAST 279 (484)
Q Consensus 203 ~~~~~e~~~l~~l~h~--niv~~~~~~~~~~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~ 279 (484)
....+|...+..+... ...+.+++..... ......++|+|++++. +|.+++..... .+......++.+++..
T Consensus 56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~-~~~~~s~lite~l~~~~~L~~~~~~~~~----~~~~~~~~ll~~l~~~ 130 (206)
T PF06293_consen 56 SRAKREWRNLQRLREAGIPTPEPVAYGERRK-GGGYRSYLITEALPGAQDLRDLLQQWEQ----LDPSQRRELLRALARL 130 (206)
T ss_pred hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcC-CCceeEEEEEEeCCCcccHHHHHHhhcc----cchhhHHHHHHHHHHH
Confidence 4577888887777433 3445555543322 1124568999999874 89999874322 4556778899999999
Q ss_pred HHHHHhcCCCCeeecCCCCCCeeecCCC---ceEEcccCccccc
Q 011508 280 LEYLHHYCETPIVHCDLKPSNVLLDGEL---TAHVSDFGLAKFL 320 (484)
Q Consensus 280 l~~LH~~~~~~ivH~dlk~~NIll~~~~---~~kl~Dfg~a~~~ 320 (484)
++-|| ..+|+|+|+++.|||++.+. .+.++||+-++..
T Consensus 131 i~~lH---~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 131 IAKLH---DAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred HHHHH---HCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 99999 99999999999999998886 8999999977653
No 457
>PRK09902 hypothetical protein; Provisional
Probab=98.80 E-value=2.2e-07 Score=81.43 Aligned_cols=158 Identities=15% Similarity=0.111 Sum_probs=107.9
Q ss_pred HhHHHhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC------ccchHHHHHHHHHHHcCCCCC--ceeE
Q 011508 152 QNLFKATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH------RGASKSFIAECQALRSIRHRN--LVKI 223 (484)
Q Consensus 152 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~------~~~~~~~~~e~~~l~~l~h~n--iv~~ 223 (484)
+.+......+-..---|+||-+.|++..+. +..+-+|.-.... +.....|.+|+..|.++..-+ +.+.
T Consensus 11 ~~~w~~~~~wve~pN~~rgG~SgV~r~~~~----g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~p 86 (216)
T PRK09902 11 NHWWATEGDWVEEPNYRRNGMSGVQCVERN----GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKI 86 (216)
T ss_pred HHHHhCCCceecCCCcCCCCcceEEEEEeC----CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCcc
Confidence 333333333333333567899999997754 2357777654211 223467999999999984322 4444
Q ss_pred eeeeeeeccCCCceeeEEeecccC-CCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCee
Q 011508 224 ITSCVSVDFQGNDFEALVYELMVN-GSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVL 302 (484)
Q Consensus 224 ~~~~~~~~~~~~~~~~lv~e~~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIl 302 (484)
+ ++...........+||+|-+++ -+|.+++.... ..+.+...+..++.++++.++-|| ..++.|+|+.+.||+
T Consensus 87 v-f~~~~k~~~~~rA~LVTe~L~g~~~L~~~l~~~~--~~~~~~~~k~~il~~va~~ia~LH---~~Gv~Hgdly~khIl 160 (216)
T PRK09902 87 V-FGEAVKIEGEWRALLVTEDMAGFISIADWYAQHA--VSPYSDEVRQAMLKAVALAFKKMH---SVNRQHGCCYVRHIY 160 (216)
T ss_pred c-eeeeeccCCceEEEEEEEeCCCCccHHHHHhcCC--cCCcchHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHhhee
Confidence 4 3322222334456899998854 58999886432 224577778899999999999999 999999999999999
Q ss_pred ecCCCc--eEEcccCcccc
Q 011508 303 LDGELT--AHVSDFGLAKF 319 (484)
Q Consensus 303 l~~~~~--~kl~Dfg~a~~ 319 (484)
++.++. ++++||.-++.
T Consensus 161 l~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 161 VKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred ecCCCCeeEEEEEhhccch
Confidence 986666 99999986653
No 458
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.78 E-value=3.6e-09 Score=105.58 Aligned_cols=101 Identities=22% Similarity=0.456 Sum_probs=77.4
Q ss_pred HHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcccccccccccCCCCc--cccccccccccccCccccCCC
Q 011508 275 DVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFLPEAANNLSSNQ--SSSVGVKGTVGYAAPEYGMGS 352 (484)
Q Consensus 275 ~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~ 352 (484)
+++.|+.|+|. +.++||++|.|++|.++.++..||+.|+++.............. .......-...|.|||++...
T Consensus 107 ~v~dgl~flh~--sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~ 184 (700)
T KOG2137|consen 107 NVADGLAFLHR--SAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGT 184 (700)
T ss_pred cccchhhhhcc--CcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhccc
Confidence 44589999997 78999999999999999999999999998866544222111111 111223356779999999998
Q ss_pred CCCcccceehhhHHHHHHHh-CCCCC
Q 011508 353 EVSTSGDVYSFGILLLEMFT-GKGPT 377 (484)
Q Consensus 353 ~~~~~~Dvws~Gvvl~ellt-g~~p~ 377 (484)
..+.++|+||+||++|.+.. |+.-+
T Consensus 185 ~~~~~sd~fSlG~li~~i~~~gk~i~ 210 (700)
T KOG2137|consen 185 TNTPASDVFSLGVLIYTIYNGGKSII 210 (700)
T ss_pred cccccccceeeeeEEEEEecCCcchh
Confidence 88999999999999999984 55444
No 459
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.59 E-value=2.8e-08 Score=69.80 Aligned_cols=57 Identities=35% Similarity=0.522 Sum_probs=36.8
Q ss_pred CCCCEEeCcCCccccccC-ccccCCCCCCeeeccccceecccccc-cccccCcccccCCC
Q 011508 18 RGIENLDLSQNNLSGRIP-KYLENFPFLQNLNLSFNHFEGEVPIK-GVFSNSSAISLDGN 75 (484)
Q Consensus 18 ~~l~~l~ls~N~l~g~~p-~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n 75 (484)
++|+.|+|++|+|+ .|| ..+.++++|+.|++++|+++...|.. ..+++++.+++++|
T Consensus 1 p~L~~L~l~~n~l~-~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N 59 (61)
T PF13855_consen 1 PNLESLDLSNNKLT-EIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNN 59 (61)
T ss_dssp TTESEEEETSSTES-EECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSS
T ss_pred CcCcEEECCCCCCC-ccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCC
Confidence 35667777777777 444 45666777777777777776655543 55666666677666
No 460
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.56 E-value=8.8e-07 Score=77.91 Aligned_cols=141 Identities=13% Similarity=0.120 Sum_probs=91.0
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHH---------HHHHHHHHHcC---CCCCceeEee
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKS---------FIAECQALRSI---RHRNLVKIIT 225 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~---------~~~e~~~l~~l---~h~niv~~~~ 225 (484)
..+|...+.+-......|.+.... +..+++|..+.......+. ..+++..+.++ .......++.
T Consensus 30 ~~~~~~~kv~k~~~r~~ValIei~----~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl 105 (229)
T PF06176_consen 30 DNNYKIIKVFKNTKRNYVALIEID----GKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYL 105 (229)
T ss_pred hCCceEEEeecCCCccEEEEEEEC----CcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCcccccccee
Confidence 466777778877777777776644 5678888876543222211 22333333333 2333333333
Q ss_pred eeeeeccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecC
Q 011508 226 SCVSVDFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDG 305 (484)
Q Consensus 226 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~ 305 (484)
+.....+.-....+++|||++|..|.+... ++. .++..+.+++.-|| ..|++|+|..|.|+++++
T Consensus 106 ~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~--------i~e----~~~~ki~~~ikqlH---~~G~~HGD~hpgNFlv~~ 170 (229)
T PF06176_consen 106 AAEKKIFRYTSSYVLLMEYIEGVELNDIED--------IDE----DLAEKIVEAIKQLH---KHGFYHGDPHPGNFLVSN 170 (229)
T ss_pred eeeeeeccceeEEEEEEEEecCeecccchh--------cCH----HHHHHHHHHHHHHH---HcCCccCCCCcCcEEEEC
Confidence 322222222345679999999988766542 222 24566778899999 999999999999999996
Q ss_pred CCceEEcccCccc
Q 011508 306 ELTAHVSDFGLAK 318 (484)
Q Consensus 306 ~~~~kl~Dfg~a~ 318 (484)
++ +++.||+..+
T Consensus 171 ~~-i~iID~~~k~ 182 (229)
T PF06176_consen 171 NG-IRIIDTQGKR 182 (229)
T ss_pred Cc-EEEEECcccc
Confidence 54 9999998665
No 461
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=98.53 E-value=2.5e-08 Score=82.33 Aligned_cols=73 Identities=27% Similarity=0.502 Sum_probs=61.8
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceec-ccccc-cccccCcccccCCC
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEG-EVPIK-GVFSNSSAISLDGN 75 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g-~~p~~-~~~~~~~~~~~~~n 75 (484)
+++|+|+ .+|.++++|++|+.|+++-|+|. .+|..|+.++-|++|||++|+|.. .+|.. -.+..+..+.+++|
T Consensus 63 ~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levldltynnl~e~~lpgnff~m~tlralyl~dn 137 (264)
T KOG0617|consen 63 LSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLDLTYNNLNENSLPGNFFYMTTLRALYLGDN 137 (264)
T ss_pred cccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhhccccccccccCCcchhHHHHHHHHHhcCC
Confidence 5789999 99999999999999999999999 999999999999999999999964 44542 23455666777777
No 462
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.51 E-value=7.7e-08 Score=67.52 Aligned_cols=53 Identities=42% Similarity=0.631 Sum_probs=47.1
Q ss_pred CCCCcccccCc-hhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccce
Q 011508 1 MNGNFFQGNIP-SSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHF 54 (484)
Q Consensus 1 l~~n~l~g~~p-~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l 54 (484)
|++|+|+ .|| ..|..+++|+.|+|++|+++..-|..|.++++|+.|++++|+|
T Consensus 8 l~~n~l~-~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 8 LSNNKLT-EIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp ETSSTES-EECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CCCCCCC-ccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 5789999 566 5789999999999999999966667899999999999999986
No 463
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=98.48 E-value=9.9e-08 Score=61.42 Aligned_cols=38 Identities=42% Similarity=0.677 Sum_probs=33.7
Q ss_pred CCCCEEeCcCCccccccCccccCCCCCCeeeccccceec
Q 011508 18 RGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEG 56 (484)
Q Consensus 18 ~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g 56 (484)
++|++|+|++|+|+ .||+.+++|++|+.|+|++|+|+.
T Consensus 1 ~~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~~ 38 (44)
T PF12799_consen 1 KNLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPISD 38 (44)
T ss_dssp TT-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCSB
T ss_pred CcceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCCC
Confidence 47999999999999 899989999999999999999984
No 464
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=98.46 E-value=3.1e-06 Score=74.11 Aligned_cols=106 Identities=22% Similarity=0.163 Sum_probs=81.9
Q ss_pred HHHHHHHHcCCC-CCceeEeeeeeeeccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 011508 206 IAECQALRSIRH-RNLVKIITSCVSVDFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLH 284 (484)
Q Consensus 206 ~~e~~~l~~l~h-~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH 284 (484)
..|.-+++.+.+ +++.+++|+|. .++|.||...+++...-. .-..-...+|..+.+||.++++.+.+++
T Consensus 7 ~~E~lll~~l~~~~~~pk~lG~CG---------~~~v~E~~~~~~~~~~~~-~l~~~~~~~w~~R~~iA~~lL~~l~~l~ 76 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLLGSCG---------RFYVVEYVGAGSLYGIYR-PLSQFLQSPWEQRAKIALQLLELLEELD 76 (188)
T ss_pred ccHHHHHHHcCCCCCCCCeeeECC---------CEEEEEeecCcccccccc-ccccccccCHHHHHHHHHHHHHHHHHHh
Confidence 357888888865 69999999983 368999998765532100 0001113689999999999999999999
Q ss_pred hcCCCCeeecCCCCCCeeecCCCceEEcccCcccccc
Q 011508 285 HYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFLP 321 (484)
Q Consensus 285 ~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~~ 321 (484)
+.....+.-.|++++|+-+++++++|++|...+...+
T Consensus 77 ~~~~~~~~lcDv~~~nfgv~~~~~lk~iDld~v~~~~ 113 (188)
T PF12260_consen 77 HGPLGFFYLCDVSPDNFGVNDDGRLKLIDLDDVFVED 113 (188)
T ss_pred cCCCCcEEEeecchHHeEEeCCCcEEEEechhcchhH
Confidence 7655668889999999999999999999998776543
No 465
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=98.45 E-value=5.9e-08 Score=90.54 Aligned_cols=73 Identities=25% Similarity=0.326 Sum_probs=66.6
Q ss_pred CCCCcccccCchhhh-CCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccccccccCcccccCCCc
Q 011508 1 MNGNFFQGNIPSSLS-SLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIKGVFSNSSAISLDGNV 76 (484)
Q Consensus 1 l~~n~l~g~~p~~~~-~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~ 76 (484)
++.|+|+ .+|.+++ +|.+|.+|||..|++. ++|+++.-+++|+.||||+|.+++.+++.+.+ .+..+.+.|||
T Consensus 235 ~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is~Lp~sLgnl-hL~~L~leGNP 308 (565)
T KOG0472|consen 235 VGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDISSLPYSLGNL-HLKFLALEGNP 308 (565)
T ss_pred hcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHHhhhhhhhcccCCccccCCcccccc-eeeehhhcCCc
Confidence 3578887 9999988 8999999999999999 99999999999999999999999999998888 78888999996
No 466
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.44 E-value=5.4e-07 Score=90.41 Aligned_cols=142 Identities=19% Similarity=0.226 Sum_probs=90.8
Q ss_pred CccccccceeEEEEEEcCCCCeeEEEEEEeeccCccch----------------------------------------HH
Q 011508 165 NLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGAS----------------------------------------KS 204 (484)
Q Consensus 165 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~----------------------------------------~~ 204 (484)
+.|+.++-|.||+|++. +|+.||||+.+..-.... -+
T Consensus 131 ~PiAsASIaQVH~A~L~---sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElD 207 (517)
T COG0661 131 EPIASASIAQVHRAVLK---SGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELD 207 (517)
T ss_pred CchhhhhHhhheeEEec---CCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhC
Confidence 68999999999999988 478999999864321110 01
Q ss_pred HHHHHHHHHcCC-----CCCceeEeeeeeeeccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHH
Q 011508 205 FIAECQALRSIR-----HRNLVKIITSCVSVDFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVAST 279 (484)
Q Consensus 205 ~~~e~~~l~~l~-----h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~ 279 (484)
+.+|...+.+++ .++ +.+=..+ .+-.....++|||++|-.+.+...... ...+. ..++..++++
T Consensus 208 y~~EA~n~~~~~~nf~~~~~-v~VP~V~----we~t~~~VLtmE~i~Gi~i~d~~~l~~---~g~d~---k~ia~~~~~~ 276 (517)
T COG0661 208 YRREAANAERFRENFKDDPD-VYVPKVY----WEYTTRRVLTMEWIDGIKISDIAALKS---AGIDR---KELAELLVRA 276 (517)
T ss_pred HHHHHHHHHHHHHHcCCCCC-eEeceee----hhccCCcEEEEEeeCCEecccHHHHHh---cCCCH---HHHHHHHHHH
Confidence 334444444441 222 1111111 222345689999999988888743222 12332 2333333332
Q ss_pred -HHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcccccccc
Q 011508 280 -LEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFLPEA 323 (484)
Q Consensus 280 -l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~~~~ 323 (484)
+..+- ..++.|.|..|.||+++.++.+.+.|||+...+++.
T Consensus 277 f~~q~~---~dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~~ 318 (517)
T COG0661 277 FLRQLL---RDGFFHADPHPGNILVRSDGRIVLLDFGIVGRLDPK 318 (517)
T ss_pred HHHHHH---hcCccccCCCccceEEecCCcEEEEcCcceecCCHH
Confidence 22222 569999999999999999999999999998877543
No 467
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.40 E-value=4.1e-06 Score=75.91 Aligned_cols=139 Identities=17% Similarity=0.214 Sum_probs=79.7
Q ss_pred CccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCc--eeEeeeeeeeccCCCceeeEEe
Q 011508 165 NLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNL--VKIITSCVSVDFQGNDFEALVY 242 (484)
Q Consensus 165 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni--v~~~~~~~~~~~~~~~~~~lv~ 242 (484)
..||+|..+.||+.. +..+++|...... ......+|.++++.+..-.+ .+.++++ ...+...+||
T Consensus 7 ~~i~~G~t~~~y~~~------~~~~VlR~~~~~~--~~~~i~~E~~~l~~l~~~glpvP~~~~~~-----~~~~~~glv~ 73 (226)
T TIGR02172 7 TQTGEGGNGESYTHK------TGKWMLKLYNPGF--DKETIKREFDASRKVFSLGIPTPHPFDLV-----EDGGRLGLIY 73 (226)
T ss_pred eeecCCCCcceeEec------CCCEEEEeCCCCC--CHHHHHHHHHHHHHHHHcCCCCCceEEEE-----ecCCeeeeee
Confidence 578999999999842 2346788876432 33557889999988854333 4455543 2233567899
Q ss_pred ecccCCC-HHHHH---------------------hhcCCCCCCCCHHHHHH-HHH----------HHHH-HHHHHHhc-C
Q 011508 243 ELMVNGS-LEEWL---------------------HLNRDAPRNLNLLQRLS-IAV----------DVAS-TLEYLHHY-C 287 (484)
Q Consensus 243 e~~~~gs-L~~~l---------------------~~~~~~~~~l~~~~~~~-i~~----------~i~~-~l~~LH~~-~ 287 (484)
|+++|.+ +...+ +..... ......... +.. .+.. ..++|... .
T Consensus 74 e~i~G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~--~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~ 151 (226)
T TIGR02172 74 ELIVGKRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCD--TSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPD 151 (226)
T ss_pred eecCCccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCC--CCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCC
Confidence 9998863 21111 111000 111111110 000 0111 11222211 1
Q ss_pred CCCeeecCCCCCCeeecCCCceEEcccCcccc
Q 011508 288 ETPIVHCDLKPSNVLLDGELTAHVSDFGLAKF 319 (484)
Q Consensus 288 ~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~ 319 (484)
...++|+|+.|.||++++++ +.++||+.+..
T Consensus 152 ~~~~~HgD~~~~Nii~~~~~-~~iIDwe~a~~ 182 (226)
T TIGR02172 152 TSTCLHGDFQIGNLITSGKG-TYWIDLGDFGY 182 (226)
T ss_pred CCceEecCCCCCcEEEcCCC-cEEEechhcCc
Confidence 34578999999999999888 99999998764
No 468
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=98.36 E-value=1.5e-07 Score=87.87 Aligned_cols=52 Identities=40% Similarity=0.570 Sum_probs=34.6
Q ss_pred CCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeecccccee
Q 011508 2 NGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFE 55 (484)
Q Consensus 2 ~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~ 55 (484)
++|.++ -+|..+..+++|..|+|++|-|. .+|.+++.+..|+.||+|+|+|.
T Consensus 420 snn~is-fv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr 471 (565)
T KOG0472|consen 420 SNNKIS-FVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR 471 (565)
T ss_pred hcCccc-cchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc
Confidence 444444 66666777777777777777666 67777766666777777766664
No 469
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=98.34 E-value=9.1e-08 Score=94.12 Aligned_cols=75 Identities=29% Similarity=0.319 Sum_probs=54.8
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccc-cCCCCCCeeeccccceecccccccccccCcccccCCCcc
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYL-ENFPFLQNLNLSFNHFEGEVPIKGVFSNSSAISLDGNVN 77 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~-~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~ 77 (484)
||+|+|. +.|..+-.-.++-.|+||+|++. +||..+ .+|.-|-+||||+|+|...+|....+..++.+.+++||.
T Consensus 110 LShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLDLS~NrLe~LPPQ~RRL~~LqtL~Ls~NPL 185 (1255)
T KOG0444|consen 110 LSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLFLDLSNNRLEMLPPQIRRLSMLQTLKLSNNPL 185 (1255)
T ss_pred cchhhhh-hcchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhhhccccchhhhcCHHHHHHhhhhhhhcCCChh
Confidence 4666666 66666666666677777777776 677553 567777777888888887777777778888888888873
No 470
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.31 E-value=1.1e-05 Score=71.79 Aligned_cols=152 Identities=20% Similarity=0.184 Sum_probs=97.4
Q ss_pred ccHHhHHHhcCCCCccCc---cccccceeEEEEEEcCCCCeeEEEEEEeeccCccc-------------------hH---
Q 011508 149 VSYQNLFKATDGFSLENL---IGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGA-------------------SK--- 203 (484)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~---lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~-------------------~~--- 203 (484)
.+...+.....+..+... |++|--+.||+|.- .++..+|+|+++...... ..
T Consensus 35 ~t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~---~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv 111 (268)
T COG1718 35 RTLETLRRLLSRGVITELVGCISTGKEANVYLAET---GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLV 111 (268)
T ss_pred HHHHHHHHHhcCCceeeeEeeecCCcceEEEeecc---CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHH
Confidence 344444455555555444 56677778999863 357889999987432111 01
Q ss_pred --HHHHHHHHHHcCC--CCCceeEeeeeeeeccCCCceeeEEeecccCCC-HHHHHhhcCCCCCCCCHHHHHHHHHHHHH
Q 011508 204 --SFIAECQALRSIR--HRNLVKIITSCVSVDFQGNDFEALVYELMVNGS-LEEWLHLNRDAPRNLNLLQRLSIAVDVAS 278 (484)
Q Consensus 204 --~~~~e~~~l~~l~--h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gs-L~~~l~~~~~~~~~l~~~~~~~i~~~i~~ 278 (484)
-..+|..-|.++. +-.+.+-+++. .-.|||||+.... -.-.|+ ..++...+...+..++++
T Consensus 112 ~~W~~kEf~NL~R~~eAGVrvP~Pi~~~---------~nVLvMEfIg~~g~pAP~Lk-----Dv~~e~~e~~~~~~~~v~ 177 (268)
T COG1718 112 FAWARKEFRNLKRAYEAGVRVPEPIAFR---------NNVLVMEFIGDDGLPAPRLK-----DVPLELEEAEGLYEDVVE 177 (268)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCceeec---------CCeEEEEeccCCCCCCCCcc-----cCCcCchhHHHHHHHHHH
Confidence 1346777777773 33444444431 3479999995431 111111 111233356677888888
Q ss_pred HHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccccc
Q 011508 279 TLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFL 320 (484)
Q Consensus 279 ~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~ 320 (484)
.+.-|-. ..++||+||+.-|||+. ++.+.|+|||.|...
T Consensus 178 ~~~~l~~--~a~LVHgDLSEyNiL~~-~~~p~iID~~QaV~~ 216 (268)
T COG1718 178 YMRRLYK--EAGLVHGDLSEYNILVH-DGEPYIIDVSQAVTI 216 (268)
T ss_pred HHHHHHH--hcCcccccchhhheEEE-CCeEEEEECcccccc
Confidence 8888873 48999999999999999 789999999988755
No 471
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.23 E-value=6.1e-07 Score=76.94 Aligned_cols=71 Identities=30% Similarity=0.407 Sum_probs=22.7
Q ss_pred CCCCcccccCchhhh-CCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccc-cccccCcccccCCC
Q 011508 1 MNGNFFQGNIPSSLS-SLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIK-GVFSNSSAISLDGN 75 (484)
Q Consensus 1 l~~n~l~g~~p~~~~-~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n 75 (484)
|++|+|+ .|. .++ .|.+|+.||||+|.++ .|+ .+..+++|+.|+|++|+++...+.. ..+++++.+++++|
T Consensus 26 L~~n~I~-~Ie-~L~~~l~~L~~L~Ls~N~I~-~l~-~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L~~L~L~~N 98 (175)
T PF14580_consen 26 LRGNQIS-TIE-NLGATLDKLEVLDLSNNQIT-KLE-GLPGLPRLKTLDLSNNRISSISEGLDKNLPNLQELYLSNN 98 (175)
T ss_dssp ------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS---S-CHHHHHH-TT--EEE-TTS
T ss_pred ccccccc-ccc-chhhhhcCCCEEECCCCCCc-ccc-CccChhhhhhcccCCCCCCccccchHHhCCcCCEEECcCC
Confidence 4566666 554 355 4677777777777777 665 3666777777777777777543322 24667777777777
No 472
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.15 E-value=5.9e-07 Score=89.14 Aligned_cols=185 Identities=18% Similarity=0.159 Sum_probs=127.5
Q ss_pred CCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCC-ceeEeeeeeeeccCCCceee
Q 011508 161 FSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRN-LVKIITSCVSVDFQGNDFEA 239 (484)
Q Consensus 161 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~~~~~~~~~~~~~~~~~~ 239 (484)
+...+-+++|++++++|.+ ...+ +....+.+... ....-++++|.+++||| .+..++. .+.+++.+
T Consensus 244 s~~fh~fvK~altknpKkR--ptae-klL~h~fvs~~-----l~~rl~~eLLdK~n~P~~~v~~~~d-----~~~E~~~~ 310 (829)
T KOG0576|consen 244 SEFFHNFVKGALTKNPKKR--PTAE-KLLQHPFVSQT-----LSRRLAIELLDKVNNPNPVVRYLED-----YDGEDYLW 310 (829)
T ss_pred hHHHHHHHHHHhcCCCccC--CChh-hheeceeeccc-----hhhHHHHHHHHHccCCCCccccccc-----CCcccccc
Confidence 3444568899999999976 3322 22334544322 44556889999999999 4444443 45667889
Q ss_pred EEeecccCC-CHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccc
Q 011508 240 LVYELMVNG-SLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAK 318 (484)
Q Consensus 240 lv~e~~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~ 318 (484)
++++++.++ +...... .....+...+...+.+.-.++++++| +..=+|+| ||+.++ +..+..||+...
T Consensus 311 i~~~i~s~~rs~~~~~~---~se~~~~~~~~~~~~r~et~~l~~l~---~~~~~~~d----~~l~s~-~~~~~~~~~v~~ 379 (829)
T KOG0576|consen 311 IPMRICSTGRSSALEMT---VSEIALEQYQFAYPLRKETRPLAELH---SSYKVHRD----NILGSE-EEVKLLDFAVPP 379 (829)
T ss_pred hhhhhhcCCccccccCC---hhhHhhhhhhhhhhhhhhcccccccc---cccccCcc----cccccc-cccccccccCCc
Confidence 999999877 2221111 01112334444556667778999999 55458888 777765 578999999988
Q ss_pred ccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCC
Q 011508 319 FLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPT 377 (484)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~ 377 (484)
.+.... ......+++.++|||+.....+..+.|+|+.|+-..++.-|-+|-
T Consensus 380 ~L~~~~--------~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr 430 (829)
T KOG0576|consen 380 QLTRTM--------KPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPR 430 (829)
T ss_pred ccCccc--------ccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCC
Confidence 764432 223456899999999999999999999999998777777777664
No 473
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.13 E-value=2.8e-05 Score=71.11 Aligned_cols=147 Identities=20% Similarity=0.239 Sum_probs=82.5
Q ss_pred CccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCC--CceeEeeeeeeeccCCCceeeEEe
Q 011508 165 NLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHR--NLVKIITSCVSVDFQGNDFEALVY 242 (484)
Q Consensus 165 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~--niv~~~~~~~~~~~~~~~~~~lv~ 242 (484)
+.|+.|..+.||+.... + ..+++|..... .....+.+|..++..+... .+.+++.++... ......+++|
T Consensus 3 ~~l~~G~~n~~~~v~~~---~-~~~vlK~~~~~--~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~--~~~~~~~~~~ 74 (239)
T PF01636_consen 3 RPLSGGFSNRVYRVTTD---D-GRYVLKFYRPP--DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSD--EFNGFPYLLM 74 (239)
T ss_dssp EEEEESSSSEEEEEEET---T-SEEEEEEESSH--HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEET--EETSEEEEEE
T ss_pred ccCCCCCeeeEEEEEEC---C-cEEEEEEeCCC--CCHHHHHHHHHHHHHHHhcCCCCceEEeecccc--cccccceEEE
Confidence 56899999999999854 2 47889986543 3446778888888888433 345566543221 2233478999
Q ss_pred ecccCCCHHH----------------HH---hhcCCCCCCCCHHHH---------HHH------------HHHHHH-HHH
Q 011508 243 ELMVNGSLEE----------------WL---HLNRDAPRNLNLLQR---------LSI------------AVDVAS-TLE 281 (484)
Q Consensus 243 e~~~~gsL~~----------------~l---~~~~~~~~~l~~~~~---------~~i------------~~~i~~-~l~ 281 (484)
+++++..+.. .+ +.............. ... ...+.+ .+.
T Consensus 75 ~~i~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (239)
T PF01636_consen 75 EYIPGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQ 154 (239)
T ss_dssp EEESSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred EEeccccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHH
Confidence 9999887777 11 111001111111110 000 011222 233
Q ss_pred HHHh----cCCCCeeecCCCCCCeeec-CCCceEEcccCcccc
Q 011508 282 YLHH----YCETPIVHCDLKPSNVLLD-GELTAHVSDFGLAKF 319 (484)
Q Consensus 282 ~LH~----~~~~~ivH~dlk~~NIll~-~~~~~kl~Dfg~a~~ 319 (484)
.++. .....++|+|+.|.||+++ +++.+.|+||+.+..
T Consensus 155 ~~~~~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~ 197 (239)
T PF01636_consen 155 ELEALLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGW 197 (239)
T ss_dssp HHHHHHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred HHHhhhccCCCcEEEEeccccccceeeeccceeEEEecccceE
Confidence 3332 1256799999999999999 556668999987753
No 474
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=98.13 E-value=1.7e-05 Score=66.68 Aligned_cols=129 Identities=19% Similarity=0.202 Sum_probs=89.2
Q ss_pred CccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCcee-EeeeeeeeccCCCceeeE
Q 011508 162 SLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVK-IITSCVSVDFQGNDFEAL 240 (484)
Q Consensus 162 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~-~~~~~~~~~~~~~~~~~l 240 (484)
...+.|++|.+|.||++.|. +..+|+|+-..++ ....+..|.++|..+.-.++-+ ++.| + ..++
T Consensus 25 ~v~~~L~KG~~s~Vyl~~~~----~~~~a~Kvrr~ds--~r~~l~kEakiLeil~g~~~~p~vy~y-------g--~~~i 89 (201)
T COG2112 25 RVEKELAKGTTSVVYLGEWR----GGEVALKVRRRDS--PRRNLEKEAKILEILAGEGVTPEVYFY-------G--EDFI 89 (201)
T ss_pred hhhhhhhcccccEEEEeecc----CceEEEEEecCCc--chhhHHHHHHHHHHhhhcCCCceEEEe-------c--hhhh
Confidence 44578999999999999987 4578888865443 3467889999999997766644 3333 1 3356
Q ss_pred EeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCC-CCCeeecCCCceEEcccCcccc
Q 011508 241 VYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLK-PSNVLLDGELTAHVSDFGLAKF 319 (484)
Q Consensus 241 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk-~~NIll~~~~~~kl~Dfg~a~~ 319 (484)
.|||+.|-.|.++-.. .+-.. ...++..---|- ..||-|+.|. |..+++..+..+.|+||..|+.
T Consensus 90 ~me~i~G~~L~~~~~~-------~~rk~----l~~vlE~a~~LD---~~GI~H~El~~~~k~vlv~~~~~~iIDFd~At~ 155 (201)
T COG2112 90 RMEYIDGRPLGKLEIG-------GDRKH----LLRVLEKAYKLD---RLGIEHGELSRPWKNVLVNDRDVYIIDFDSATF 155 (201)
T ss_pred hhhhhcCcchhhhhhc-------ccHHH----HHHHHHHHHHHH---HhccchhhhcCCceeEEecCCcEEEEEccchhh
Confidence 6999988888776531 11222 233444433344 7889999987 5555555556999999998874
No 475
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.13 E-value=2.9e-05 Score=71.60 Aligned_cols=142 Identities=15% Similarity=0.073 Sum_probs=80.0
Q ss_pred ccccccc-eeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCC-CCCceeEeeeeeeeccCCCceeeEEee
Q 011508 166 LIGAGSF-GSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIR-HRNLVKIITSCVSVDFQGNDFEALVYE 243 (484)
Q Consensus 166 ~lg~G~~-g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~lv~e 243 (484)
.|..|.+ ..||+.... +..+.+|+..... .....+|+++++.+. +--+.+++++.. .++..++|||
T Consensus 5 ~~~~g~~~~~v~~~~~~----~~~~~vk~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~-----~~~~~~lv~e 72 (244)
T cd05150 5 RVTEGQSGATVYRLDGK----NPGLYLKIAPSGP---TYELEREAERLRWLAGKLPVPEVIDYGS-----DDGRAWLLTS 72 (244)
T ss_pred ecCCCCCcCeEEEEcCC----CCcEEEEecCCCc---ccchHHHHHHHHHHHhcCCCCeEEEEEe-----cCCccEEEEE
Confidence 3445555 788998632 2467888775432 345678888888873 333445565532 2235689999
Q ss_pred cccCCCHHHHH-------------------hhcCCCCCCCCH--HHHHHHHH--------------------HHHHHHHH
Q 011508 244 LMVNGSLEEWL-------------------HLNRDAPRNLNL--LQRLSIAV--------------------DVASTLEY 282 (484)
Q Consensus 244 ~~~~gsL~~~l-------------------~~~~~~~~~l~~--~~~~~i~~--------------------~i~~~l~~ 282 (484)
+++|.++.+.. +.......+... ........ .+...+..
T Consensus 73 ~i~G~~l~~~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (244)
T cd05150 73 AVPGVPAAALWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAE 152 (244)
T ss_pred eeCCccHhHhhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHH
Confidence 99988776432 111000001110 00000000 01111222
Q ss_pred HHh----cCCCCeeecCCCCCCeeecCCCceEEcccCcccc
Q 011508 283 LHH----YCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKF 319 (484)
Q Consensus 283 LH~----~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~ 319 (484)
|-. .....++|+|+.|.||+++++....|+||+.+..
T Consensus 153 l~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~~ 193 (244)
T cd05150 153 LEATRPAEEDLVVTHGDACLPNIIVDPGKFSGFIDLGRLGV 193 (244)
T ss_pred HHhhCCCcCceEEECCCCCCccEEEeCCcEEEEEEcccccc
Confidence 211 0134589999999999999987788999997764
No 476
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=98.04 E-value=9.7e-05 Score=64.98 Aligned_cols=133 Identities=20% Similarity=0.274 Sum_probs=89.5
Q ss_pred cCccccccceeEEEEEEcCCCCeeEEEEEEeeccC----------------ccchHHHHHHHHHHHcCC------CCCce
Q 011508 164 ENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH----------------RGASKSFIAECQALRSIR------HRNLV 221 (484)
Q Consensus 164 ~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~----------------~~~~~~~~~e~~~l~~l~------h~niv 221 (484)
...||+|+.-.||.- + ......||+..... .....+..+|+.....+. +.+|.
T Consensus 6 ~~~i~~G~~R~cy~H--P---~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~ 80 (199)
T PF10707_consen 6 SDLIAQGGERDCYQH--P---DDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIP 80 (199)
T ss_pred CcccccCCCceEEEC--C---CCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccc
Confidence 468999999999962 2 23457789887655 122456677777666665 78899
Q ss_pred eEeeeeeeeccCCCceeeEEeecccC------CCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecC
Q 011508 222 KIITSCVSVDFQGNDFEALVYELMVN------GSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCD 295 (484)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~lv~e~~~~------gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~d 295 (484)
+++|+ .+.+.-..+|+|.+.+ .+|.+++... .++. .. ...+-+-..||- ...|+.+|
T Consensus 81 r~~G~-----veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~-----~~~~-~~---~~~L~~f~~~l~---~~~Iv~~d 143 (199)
T PF10707_consen 81 RFYGF-----VETNLGLGLVVELIRDADGNISPTLEDYLKEG-----GLTE-EL---RQALDEFKRYLL---DHHIVIRD 143 (199)
T ss_pred cEeEE-----EecCCceEEEEEEEECCCCCcCccHHHHHHcC-----CccH-HH---HHHHHHHHHHHH---HcCCeecC
Confidence 99998 4455567889888753 2688888522 2444 33 333344455666 77899999
Q ss_pred CCCCCeeecCCC----ceEEcc-cCccc
Q 011508 296 LKPSNVLLDGEL----TAHVSD-FGLAK 318 (484)
Q Consensus 296 lk~~NIll~~~~----~~kl~D-fg~a~ 318 (484)
++|+||++..+. .+.|+| ||...
T Consensus 144 l~~~NIv~~~~~~~~~~lvlIDG~G~~~ 171 (199)
T PF10707_consen 144 LNPHNIVVQRRDSGEFRLVLIDGLGEKE 171 (199)
T ss_pred CCcccEEEEecCCCceEEEEEeCCCCcc
Confidence 999999995432 567777 45433
No 477
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=98.02 E-value=5.3e-07 Score=88.89 Aligned_cols=73 Identities=22% Similarity=0.291 Sum_probs=37.4
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccccccccCcccccCCC
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIKGVFSNSSAISLDGN 75 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n 75 (484)
||.|+|. .+|..+-++++|+.|+||+|+|+ .+-...+...+|+.|+||.|+|+..+...-.++++..+...+|
T Consensus 229 lS~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt~LP~avcKL~kL~kLy~n~N 301 (1255)
T KOG0444|consen 229 LSENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLTVLPDAVCKLTKLTKLYANNN 301 (1255)
T ss_pred ccccCCC-cchHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhccchHHHhhhHHHHHHHhccC
Confidence 4556665 55666666666666655555555 4444444455555555555555533333333444444444333
No 478
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=98.02 E-value=8.8e-05 Score=64.66 Aligned_cols=130 Identities=25% Similarity=0.396 Sum_probs=90.8
Q ss_pred CCCCccCccccccc-eeEEEEEEcCCCCeeEEEEEEeec---cCc------------------cchHHHHHHHHHHHcCC
Q 011508 159 DGFSLENLIGAGSF-GSVYKGIFDHDDHETLVAVKVLNL---QHR------------------GASKSFIAECQALRSIR 216 (484)
Q Consensus 159 ~~~~~~~~lg~G~~-g~Vy~~~~~~~~~~~~vavK~~~~---~~~------------------~~~~~~~~e~~~l~~l~ 216 (484)
.+++..+.||.|.. |.||++... +..+|+|++.. ... .....|..|.+...+|+
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~I~----g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLk 112 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVEID----GRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLK 112 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEEEC----CeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHH
Confidence 67888999999999 999999976 57899999431 110 11235788998888884
Q ss_pred ---CCCc--eeEeeeeeeec---c----------CCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHH
Q 011508 217 ---HRNL--VKIITSCVSVD---F----------QGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVAS 278 (484)
Q Consensus 217 ---h~ni--v~~~~~~~~~~---~----------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~ 278 (484)
+.++ ++.+||..-.. . .......||.||.+... .+... -+.+|.+
T Consensus 113 e~~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~-------------~~~~~----~~~~~~~ 175 (207)
T PF13095_consen 113 EAGREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP-------------PLQIR----DIPQMLR 175 (207)
T ss_pred hccccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc-------------ccchh----HHHHHHH
Confidence 4456 88888864331 0 12233467888775432 12222 2456666
Q ss_pred HHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 279 TLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 279 ~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
-+..+| ..+|+-+|+++.|.. .-||+|||.+
T Consensus 176 dl~~~~---k~gI~~~Dv~~~ny~-----~G~lvDfs~~ 206 (207)
T PF13095_consen 176 DLKILH---KLGIVPRDVKPRNYR-----GGKLVDFSSS 206 (207)
T ss_pred HHHHHH---HCCeeeccCcccccc-----CCEEEecccC
Confidence 677888 999999999999987 5689999864
No 479
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.02 E-value=3.7e-05 Score=77.11 Aligned_cols=140 Identities=19% Similarity=0.237 Sum_probs=88.0
Q ss_pred CccccccceeEEEEEEcCCCCeeEEEEEEeeccCccch-------------------------------H------HHHH
Q 011508 165 NLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGAS-------------------------------K------SFIA 207 (484)
Q Consensus 165 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~-------------------------------~------~~~~ 207 (484)
+.||.-+.|.||+|++++ |+.||||+-+..-.... + +|.+
T Consensus 167 ~piaaASlaQVhrA~L~~---G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~ 243 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARLKN---GEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTK 243 (538)
T ss_pred chhhhcchhheEEEEecC---CCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHH
Confidence 679999999999999884 78899998764321110 1 1334
Q ss_pred HHHHHHcC----CCCC------ceeEeeeeeeeccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHH
Q 011508 208 ECQALRSI----RHRN------LVKIITSCVSVDFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVA 277 (484)
Q Consensus 208 e~~~l~~l----~h~n------iv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~ 277 (484)
|.+-..+. .|-+ |.+++-. -.....|+||||+|..+.+.-.... ..++... ++..+.
T Consensus 244 EA~Nae~~~~~f~~~~~~~~V~VP~Vy~~-------~st~RVLtME~~~G~~i~Dl~~i~~---~gi~~~~---i~~~l~ 310 (538)
T KOG1235|consen 244 EAKNAERFRENFKDFSLLTYVLVPKVYWD-------LSTKRVLTMEYVDGIKINDLDAIDK---RGISPHD---ILNKLV 310 (538)
T ss_pred HHHhHHHHHHHHHhcccccceeCCeehhh-------cCcceEEEEEecCCccCCCHHHHHH---cCCCHHH---HHHHHH
Confidence 44333222 3444 3333322 2235689999999986655432111 1244443 444444
Q ss_pred HHHHHHHhcCCCCeeecCCCCCCeeecC----CCceEEcccCccccccc
Q 011508 278 STLEYLHHYCETPIVHCDLKPSNVLLDG----ELTAHVSDFGLAKFLPE 322 (484)
Q Consensus 278 ~~l~~LH~~~~~~ivH~dlk~~NIll~~----~~~~kl~Dfg~a~~~~~ 322 (484)
++. ++.....|++|+|=.|.||+++. ++.+.+-|||+...+..
T Consensus 311 ~~~--~~qIf~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~ 357 (538)
T KOG1235|consen 311 EAY--LEQIFKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH 357 (538)
T ss_pred HHH--HHHHHhcCCccCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence 432 22223678999999999999983 67899999999876643
No 480
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.00 E-value=6.7e-07 Score=71.25 Aligned_cols=73 Identities=25% Similarity=0.425 Sum_probs=57.8
Q ss_pred CCCCcccccCchhhhCC-CCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccccccccCcccccCCC
Q 011508 1 MNGNFFQGNIPSSLSSL-RGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIKGVFSNSSAISLDGN 75 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l-~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n 75 (484)
|++|.|. .+|..|... +-++.|+|++|.|+ .+|.+++.|+.|+.|++++|.|.-.+-....+.++-.|+..+|
T Consensus 60 ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~~~p~vi~~L~~l~~Lds~~n 133 (177)
T KOG4579|consen 60 LSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLNAEPRVIAPLIKLDMLDSPEN 133 (177)
T ss_pred cccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccccchHHHHHHHhHHHhcCCCC
Confidence 5788887 777777654 58888999999998 8898888899999999999988876655555777777777666
No 481
>PLN02876 acyl-CoA dehydrogenase
Probab=97.96 E-value=0.00011 Score=79.73 Aligned_cols=84 Identities=12% Similarity=0.127 Sum_probs=55.8
Q ss_pred cCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCC-CCCc--eeEeeeeeeeccCCCceee
Q 011508 164 ENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR-GASKSFIAECQALRSIR-HRNL--VKIITSCVSVDFQGNDFEA 239 (484)
Q Consensus 164 ~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~-h~ni--v~~~~~~~~~~~~~~~~~~ 239 (484)
...++.|.++.+|+...........+++|+...... .....+.+|.++++.+. |.++ .+++.+|.+.. .....+
T Consensus 43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~--v~G~~f 120 (822)
T PLN02876 43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDAS--VIGTAF 120 (822)
T ss_pred EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCC--cCCCce
Confidence 467899999999998765432224577776543221 22356889999999995 6664 67777664322 123468
Q ss_pred EEeecccCCC
Q 011508 240 LVYELMVNGS 249 (484)
Q Consensus 240 lv~e~~~~gs 249 (484)
+||||++|..
T Consensus 121 lVME~v~G~~ 130 (822)
T PLN02876 121 YIMEYLEGRI 130 (822)
T ss_pred EEEEecCCcc
Confidence 9999998754
No 482
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=97.92 E-value=2.3e-06 Score=88.26 Aligned_cols=75 Identities=28% Similarity=0.456 Sum_probs=50.4
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceec-ccccccccccCcccccCCCccc
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEG-EVPIKGVFSNSSAISLDGNVNL 78 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g-~~p~~~~~~~~~~~~~~~n~~l 78 (484)
||+|.|+ .||.++.+|..|++|...+|+|. .+| ++.+++.|+++|||.|+|+- .+|....-++|++++++||..+
T Consensus 414 LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~l 489 (1081)
T KOG0618|consen 414 LSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNTRL 489 (1081)
T ss_pred cccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCccc
Confidence 4556665 66666666666666666666666 666 67777888888888888864 3444333378889999999753
No 483
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=97.88 E-value=5.9e-06 Score=70.89 Aligned_cols=73 Identities=32% Similarity=0.423 Sum_probs=27.6
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccc-cCCCCCCeeeccccceecccc--cccccccCcccccCCCc
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYL-ENFPFLQNLNLSFNHFEGEVP--IKGVFSNSSAISLDGNV 76 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~-~~l~~L~~l~ls~N~l~g~~p--~~~~~~~~~~~~~~~n~ 76 (484)
||+|+|+ .++. +..|++|+.|+|++|+++ .++..+ ..+++|+.|+|++|++...-. ....+++|..+++.+||
T Consensus 49 Ls~N~I~-~l~~-l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NP 124 (175)
T PF14580_consen 49 LSNNQIT-KLEG-LPGLPRLKTLDLSNNRIS-SISEGLDKNLPNLQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNP 124 (175)
T ss_dssp -TTS--S---TT-----TT--EEE--SS----S-CHHHHHH-TT--EEE-TTS---SCCCCGGGGG-TT--EEE-TT-G
T ss_pred CCCCCCc-cccC-ccChhhhhhcccCCCCCC-ccccchHHhCCcCCEEECcCCcCCChHHhHHHHcCCCcceeeccCCc
Confidence 5677777 5653 667777788888888877 565444 357777888888777754221 22456677777777774
No 484
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=97.85 E-value=0.00011 Score=67.42 Aligned_cols=32 Identities=31% Similarity=0.428 Sum_probs=26.9
Q ss_pred CCCeeecCCCCCCeeecCCCceEEcccCcccc
Q 011508 288 ETPIVHCDLKPSNVLLDGELTAHVSDFGLAKF 319 (484)
Q Consensus 288 ~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~ 319 (484)
...++|+|+.+.||+++++...-|+||+.+..
T Consensus 163 ~~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~~ 194 (235)
T cd05155 163 PPVWFHGDLAPGNLLVQDGRLSAVIDFGCLGV 194 (235)
T ss_pred CceEEeCCCCCCcEEEECCCEEEEEeCcccCc
Confidence 44589999999999999776667999998764
No 485
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=97.85 E-value=5.1e-06 Score=75.01 Aligned_cols=72 Identities=29% Similarity=0.338 Sum_probs=47.0
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccccccccCcccccCCC
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIKGVFSNSSAISLDGN 75 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n 75 (484)
||+|.|+ .|..++--++.++.|+||+|.++ .+- .+..|++|+.||||+|.|+...--...+.++..+.+++|
T Consensus 291 LS~N~I~-~iDESvKL~Pkir~L~lS~N~i~-~v~-nLa~L~~L~~LDLS~N~Ls~~~Gwh~KLGNIKtL~La~N 362 (490)
T KOG1259|consen 291 LSGNLIT-QIDESVKLAPKLRRLILSQNRIR-TVQ-NLAELPQLQLLDLSGNLLAECVGWHLKLGNIKTLKLAQN 362 (490)
T ss_pred ccccchh-hhhhhhhhccceeEEecccccee-eeh-hhhhcccceEeecccchhHhhhhhHhhhcCEeeeehhhh
Confidence 5667776 77777777777777777777777 553 366777777777777777643333345556666666666
No 486
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=97.83 E-value=1e-05 Score=52.01 Aligned_cols=33 Identities=36% Similarity=0.628 Sum_probs=29.4
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccC
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIP 35 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p 35 (484)
|++|+|+ .+|+++++|++|+.|+|++|+|+ .+|
T Consensus 8 l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~-~i~ 40 (44)
T PF12799_consen 8 LSNNQIT-DLPPELSNLPNLETLNLSNNPIS-DIS 40 (44)
T ss_dssp ETSSS-S-SHGGHGTTCTTSSEEEETSSCCS-BEG
T ss_pred ccCCCCc-ccCchHhCCCCCCEEEecCCCCC-CCc
Confidence 5799999 89999999999999999999999 665
No 487
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=97.69 E-value=8.9e-06 Score=79.92 Aligned_cols=74 Identities=26% Similarity=0.167 Sum_probs=35.1
Q ss_pred CCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccc-cccccCcccccCCC
Q 011508 2 NGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIK-GVFSNSSAISLDGN 75 (484)
Q Consensus 2 ~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n 75 (484)
+.|+++..=-.++..|+.|+.||||+|.++..-++++.-+.+|+.|+||+|+++...+.. ..+..|+.|++++|
T Consensus 277 ~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~N 351 (873)
T KOG4194|consen 277 ETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHN 351 (873)
T ss_pred ccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhccccc
Confidence 344444333344455555555555555555444455555555555555555555444432 22333444444443
No 488
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=97.63 E-value=0.0001 Score=78.58 Aligned_cols=200 Identities=22% Similarity=0.241 Sum_probs=132.0
Q ss_pred HHHHHHHHHcCCCCCceeEeeeeeeeccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 011508 205 FIAECQALRSIRHRNLVKIITSCVSVDFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLH 284 (484)
Q Consensus 205 ~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH 284 (484)
...|+..+.++.|+|++.++.|....-..+ -...+..+++..-++...++. ...++....+.+..++..|++|+|
T Consensus 229 ~E~e~~~l~k~~~~n~~~~~~~~le~~~~g-~~~~v~~~~~s~~~~~~~~q~----v~~i~~~~~r~~~~~~~~GL~~~h 303 (1351)
T KOG1035|consen 229 TEIELESLSKIAHDNLGGYFVYGLERLFRG-IVLDVLQEICSKVELRSLLQS----VGSIPLETLRILHQKLLEGLAYLH 303 (1351)
T ss_pred HHHHHHHHHhhccccccceeEEeehhhcch-HHHHHHHhhcCccchHHHHhh----ccccCHHHHHHHHHHHhhhHHHHH
Confidence 345777888889999999988865433211 122344577878788877763 334778888889999999999999
Q ss_pred hcCCCCeeecCCCCC---CeeecCCCceEEc--ccCcccccccccccCCCCccccccccccccccCccccCCCCCCc--c
Q 011508 285 HYCETPIVHCDLKPS---NVLLDGELTAHVS--DFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVST--S 357 (484)
Q Consensus 285 ~~~~~~ivH~dlk~~---NIll~~~~~~kl~--Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~--~ 357 (484)
+....|.-+..+ +--.+..+.+.++ ||+.+..++...... ....+..+.+||......+.. .
T Consensus 304 ---~~~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~~--------~~~~~~~~~~~e~~~~~~~~~~r~ 372 (1351)
T KOG1035|consen 304 ---SLSLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKSF--------SDLLAEIRNADEDLKENTAKKSRL 372 (1351)
T ss_pred ---HhccceeEEecccccccccCccceeecchhhhcccccCCCcccch--------hhcCccccccccccccccchhhhh
Confidence 555555545444 4444566667776 888887664432211 123455677888776655544 4
Q ss_pred cceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHH
Q 011508 358 GDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVS 437 (484)
Q Consensus 358 ~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (484)
.|+|.+|.....+..|..+-... . ....+++.. +...
T Consensus 373 ~dL~~lgll~~~~~~~~~i~~~~-------------~---~~~~~l~~~---------------------------~~~~ 409 (1351)
T KOG1035|consen 373 TDLWCLGLLLLQLSQGEDISEKS-------------A---VPVSLLDVL---------------------------STSE 409 (1351)
T ss_pred hHHHHHHHHHhhhhhcCcccccc-------------c---chhhhhccc---------------------------cchh
Confidence 79999999999999887653210 0 001111110 1124
Q ss_pred HHhHhhccCCCCcCCCCCHHHHHHHH
Q 011508 438 VLGIGVICSSELPRERMNMEEVAAQL 463 (484)
Q Consensus 438 l~~l~~~cl~~dP~~RPt~~evl~~L 463 (484)
+.+....|+..++++|+++.+++...
T Consensus 410 ~~d~~~~~~~~~~~~Rl~~~~ll~~~ 435 (1351)
T KOG1035|consen 410 LLDALPKCLDEDSEERLSALELLTHP 435 (1351)
T ss_pred hhhhhhhhcchhhhhccchhhhhhch
Confidence 56777889999999999999998764
No 489
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.62 E-value=0.00045 Score=63.22 Aligned_cols=75 Identities=20% Similarity=0.264 Sum_probs=45.8
Q ss_pred CccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCce-eEeeeeeeeccCCCceeeEEee
Q 011508 165 NLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLV-KIITSCVSVDFQGNDFEALVYE 243 (484)
Q Consensus 165 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv-~~~~~~~~~~~~~~~~~~lv~e 243 (484)
+.|..|-...+|+....+. .+..|++|+...... ......+|+.+++.+...+++ ++++. .. ..+|||
T Consensus 4 ~~l~gG~tN~~~~v~~~~~-~~~~~vlR~~~~~~~-~~~d~~~E~~~~~~l~~~gl~P~v~~~-----~~----~~~l~e 72 (235)
T cd05157 4 KRFTGGITNKLVKVSNKED-NQDAVLVRVYGNKTE-LIIDRERELRIHKLLSKHGLAPKLYAT-----FQ----NGLIYE 72 (235)
T ss_pred EEcCCcccceEEEEEcCCC-CCCeEEEEEccCCcc-ceecHHHHHHHHHHHHhCCCCCeEEEE-----eC----CcEEEE
Confidence 4677888899999863310 135688887653322 112334788888888544443 33332 11 248999
Q ss_pred cccCCCH
Q 011508 244 LMVNGSL 250 (484)
Q Consensus 244 ~~~~gsL 250 (484)
|++|.++
T Consensus 73 ~i~G~~l 79 (235)
T cd05157 73 FIPGRTL 79 (235)
T ss_pred eeCCCcC
Confidence 9988765
No 490
>PRK10593 hypothetical protein; Provisional
Probab=97.58 E-value=0.0011 Score=62.86 Aligned_cols=80 Identities=9% Similarity=-0.008 Sum_probs=54.0
Q ss_pred ccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCC---CCceeEeeeeeeeccCCCceee
Q 011508 163 LENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRH---RNLVKIITSCVSVDFQGNDFEA 239 (484)
Q Consensus 163 ~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h---~niv~~~~~~~~~~~~~~~~~~ 239 (484)
-.+.||.|..+.||+.... ++ .+.+|..+.. .....+..|.+.|+.+.- -.+.++++.|... ...+..+
T Consensus 18 ~~~~i~~G~~~~vy~~~~~---~~-~~~~k~~~~~--~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~--~~~g~~~ 89 (297)
T PRK10593 18 RVECISEQPYAALWALYDS---QG-NPMPLMARSF--STPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHE--QSPGPDV 89 (297)
T ss_pred eeeecCCccceeEEEEEcC---CC-CEEEEEeccc--ccchHHHHHHHHHHHHccCCCCCcCcEEEEeccC--CcCCCeE
Confidence 3467999999999998632 22 3666764321 123578899999998843 3577778765432 1234579
Q ss_pred EEeecccCCCH
Q 011508 240 LVYELMVNGSL 250 (484)
Q Consensus 240 lv~e~~~~gsL 250 (484)
+|||++++.++
T Consensus 90 LVmE~i~G~~~ 100 (297)
T PRK10593 90 LLLERLRGVSV 100 (297)
T ss_pred EEEeccCCEec
Confidence 99999988754
No 491
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=97.57 E-value=1.1e-05 Score=79.31 Aligned_cols=55 Identities=27% Similarity=0.259 Sum_probs=30.7
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeecccccee
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFE 55 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~ 55 (484)
||.|.|+...+.++..+++|+.||||+|+|+.--|.+|..|..|+.|+||+|.+.
T Consensus 300 lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~ 354 (873)
T KOG4194|consen 300 LSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSID 354 (873)
T ss_pred cchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchH
Confidence 4566666556666666666666666666666222233444444444444444443
No 492
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=97.49 E-value=5.3e-05 Score=79.85 Aligned_cols=51 Identities=27% Similarity=0.337 Sum_probs=28.1
Q ss_pred CCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccccccccCcccccCCC
Q 011508 18 RGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIKGVFSNSSAISLDGN 75 (484)
Q Consensus 18 ~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n 75 (484)
++|+.|+|++|+|+ .+|.. .++|+.|+||+|+|++ +|.. ..++..+++++|
T Consensus 382 ~~L~~LdLs~N~Lt-~LP~l---~s~L~~LdLS~N~Lss-IP~l--~~~L~~L~Ls~N 432 (788)
T PRK15387 382 SGLKELIVSGNRLT-SLPVL---PSELKELMVSGNRLTS-LPML--PSGLLSLSVYRN 432 (788)
T ss_pred cccceEEecCCccc-CCCCc---ccCCCEEEccCCcCCC-CCcc--hhhhhhhhhccC
Confidence 35667777777777 46643 2456666666666664 3321 223444555555
No 493
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=97.46 E-value=1.4e-05 Score=63.86 Aligned_cols=75 Identities=23% Similarity=0.325 Sum_probs=60.4
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccccccccCcccccCCCccc
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIKGVFSNSSAISLDGNVNL 78 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~l 78 (484)
|++|.|+ .+|.+++.++.|+.|++++|.|. ..|..+..|.+|..||..+|.+. .+|.....+.+..+.-.+|..+
T Consensus 84 l~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~-eid~dl~~s~~~al~~lgnepl 158 (177)
T KOG4579|consen 84 LANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDMLDSPENARA-EIDVDLFYSSLPALIKLGNEPL 158 (177)
T ss_pred cchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHHhcCCCCccc-cCcHHHhccccHHHHHhcCCcc
Confidence 6789999 99999999999999999999999 89999999999999999999987 5555444444444433355333
No 494
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.45 E-value=0.0016 Score=60.51 Aligned_cols=140 Identities=14% Similarity=0.045 Sum_probs=77.4
Q ss_pred ccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCce-eEeeeeeeeccCCCceeeEEeec
Q 011508 166 LIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLV-KIITSCVSVDFQGNDFEALVYEL 244 (484)
Q Consensus 166 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv-~~~~~~~~~~~~~~~~~~lv~e~ 244 (484)
.+..|-.+.+|+... ++..+++|..........-...+|.++++.+....+. +++..+ ..++||||
T Consensus 3 ~~~~G~tn~~y~~~~----~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~---------~~~~v~e~ 69 (256)
T TIGR02721 3 TLSGGLTNRSWRIEH----PGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVN---------EHWLLVEW 69 (256)
T ss_pred cCCCcCcCCeEEEEe----CCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEe---------CCEEEEEe
Confidence 456788889998862 2456778875433222112357788888888544333 333321 13689999
Q ss_pred ccCCCHHHH-----------------HhhcCCCCCCCCHHHH-HHHHHH---------HHHHHHHHHhc-----CCCCee
Q 011508 245 MVNGSLEEW-----------------LHLNRDAPRNLNLLQR-LSIAVD---------VASTLEYLHHY-----CETPIV 292 (484)
Q Consensus 245 ~~~gsL~~~-----------------l~~~~~~~~~l~~~~~-~~i~~~---------i~~~l~~LH~~-----~~~~iv 292 (484)
++|..+... ++.......+++.... .....+ +...+..+-.. ....++
T Consensus 70 i~G~~~~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 149 (256)
T TIGR02721 70 LEGEVITLDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPL 149 (256)
T ss_pred ccCcccccccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeee
Confidence 988654321 1111111112222211 111111 11112222111 123589
Q ss_pred ecCCCCCCeeecCCCceEEcccCcccc
Q 011508 293 HCDLKPSNVLLDGELTAHVSDFGLAKF 319 (484)
Q Consensus 293 H~dlk~~NIll~~~~~~kl~Dfg~a~~ 319 (484)
|+|+.|.||++++++ +.|+||..+..
T Consensus 150 H~Dl~~~Nil~~~~~-~~lIDwE~a~~ 175 (256)
T TIGR02721 150 HMDVHAYNLVVTPQG-LKLIDWEYASD 175 (256)
T ss_pred cCCCCcCcEEEeCCC-CEEEeccccCc
Confidence 999999999999877 78999998764
No 495
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=97.45 E-value=2.5e-05 Score=76.63 Aligned_cols=72 Identities=28% Similarity=0.433 Sum_probs=53.1
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccccccccCcccccCCC
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIKGVFSNSSAISLDGN 75 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n 75 (484)
|+.|.+. .||..+++|..|++|||+.|+++ .+|..+..|+ |++|-+++|+++..++..+....+..++++.|
T Consensus 105 Ly~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~sNNkl~~lp~~ig~~~tl~~ld~s~n 176 (722)
T KOG0532|consen 105 LYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVSNNKLTSLPEEIGLLPTLAHLDVSKN 176 (722)
T ss_pred HHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEecCccccCCcccccchhHHHhhhhhh
Confidence 3456666 77777888888888888888888 7777777775 77788888887766666665566666777666
No 496
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.41 E-value=0.003 Score=61.86 Aligned_cols=76 Identities=17% Similarity=0.083 Sum_probs=50.9
Q ss_pred CccccccceeEEEEEEcCCCCeeEEEEEEeeccC-------ccchHHHHHHHHHHHcCC---CCCceeEeeeeeeeccCC
Q 011508 165 NLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH-------RGASKSFIAECQALRSIR---HRNLVKIITSCVSVDFQG 234 (484)
Q Consensus 165 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~ 234 (484)
+.||.|.+..||++...+ .++.++||.-.... .-..+....|.+.|..+. ..++.+++.+ +
T Consensus 32 ~elggGn~N~VyrV~~~~--g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~-------D 102 (401)
T PRK09550 32 REIGDGNLNLVFRVSDTE--GGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY-------D 102 (401)
T ss_pred eEcCCCceEEEEEEEeCC--CCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE-------C
Confidence 579999999999998542 22478999753111 123456777888888762 3456667765 2
Q ss_pred CceeeEEeecccCCC
Q 011508 235 NDFEALVYELMVNGS 249 (484)
Q Consensus 235 ~~~~~lv~e~~~~gs 249 (484)
....++||||+++..
T Consensus 103 ~~~~~lVME~L~~~~ 117 (401)
T PRK09550 103 EELAVTVMEDLSDHK 117 (401)
T ss_pred CCCCEEEEecCCCcc
Confidence 234689999998643
No 497
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=97.39 E-value=6.2e-05 Score=70.75 Aligned_cols=79 Identities=18% Similarity=0.157 Sum_probs=38.0
Q ss_pred CCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccc-cccccCcccccCCCccccC
Q 011508 2 NGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIK-GVFSNSSAISLDGNVNLCG 80 (484)
Q Consensus 2 ~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n~~l~g 80 (484)
++|+|++.-+.+|..+++|+.|.|..|+|.-.--..|.++..|+.|+|..|+++-.-|.. ..+.++..+++..||..|.
T Consensus 282 snN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~Cn 361 (498)
T KOG4237|consen 282 SNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCN 361 (498)
T ss_pred CCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCc
Confidence 344444333444444444444444444444222233445555666666666666555543 3344555566666655543
No 498
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=97.39 E-value=0.00013 Score=67.34 Aligned_cols=135 Identities=19% Similarity=0.204 Sum_probs=89.7
Q ss_pred CCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc-----------------cc-----hHHHHHHHHHHHcCC-
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR-----------------GA-----SKSFIAECQALRSIR- 216 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-----------------~~-----~~~~~~e~~~l~~l~- 216 (484)
=+++++.||-|.-+.||.+... .++..++|.-..... +. .-...+|...|+.|.
T Consensus 93 v~svGnqIGVGKESDIY~v~d~---~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e 169 (465)
T KOG2268|consen 93 VESVGNQIGVGKESDIYVVADE---EGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYE 169 (465)
T ss_pred hhhhccccccccccceEEEecC---CCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHH
Confidence 4678899999999999999744 567788875432110 00 012456777777773
Q ss_pred CC-CceeEeeeeeeeccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecC
Q 011508 217 HR-NLVKIITSCVSVDFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCD 295 (484)
Q Consensus 217 h~-niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~d 295 (484)
|- -+.+.++ .+..++|||++.+..|.+.-+. .+... +...+..-+--|- .+|+||+|
T Consensus 170 ~gfpVPkpiD---------~~RH~Vvmelv~g~Pl~~v~~v-------~d~~~---ly~~lm~~Iv~la---~~GlIHgD 227 (465)
T KOG2268|consen 170 RGFPVPKPID---------HNRHCVVMELVDGYPLRQVRHV-------EDPPT---LYDDLMGLIVRLA---NHGLIHGD 227 (465)
T ss_pred cCCCCCCccc---------ccceeeHHHhhcccceeeeeec-------CChHH---HHHHHHHHHHHHH---HcCceecc
Confidence 22 2333333 3367899999988877654321 12222 3333444444565 88999999
Q ss_pred CCCCCeeecCCCceEEcccCcccc
Q 011508 296 LKPSNVLLDGELTAHVSDFGLAKF 319 (484)
Q Consensus 296 lk~~NIll~~~~~~kl~Dfg~a~~ 319 (484)
..--||++++++.++++||-....
T Consensus 228 FNEFNimv~dd~~i~vIDFPQmvS 251 (465)
T KOG2268|consen 228 FNEFNIMVKDDDKIVVIDFPQMVS 251 (465)
T ss_pred cchheeEEecCCCEEEeechHhhc
Confidence 999999999999999999976543
No 499
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.38 E-value=0.00098 Score=63.57 Aligned_cols=145 Identities=21% Similarity=0.190 Sum_probs=81.2
Q ss_pred CccccccceeEEEEEEcCC----CCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCce-eEeeeeeeeccCCCceee
Q 011508 165 NLIGAGSFGSVYKGIFDHD----DHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLV-KIITSCVSVDFQGNDFEA 239 (484)
Q Consensus 165 ~~lg~G~~g~Vy~~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv-~~~~~~~~~~~~~~~~~~ 239 (484)
+.+..|-...+|+....+. ..+..+++|+..... .......+|.+++..+....+. ++++++ . -.
T Consensus 4 ~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~-~~~~~r~~E~~~~~~l~~~g~~P~~~~~~-----~----~~ 73 (302)
T cd05156 4 SKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSV-ELLIDRERELVVFARLSERNLGPKLYGIF-----P----NG 73 (302)
T ss_pred EEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCC-cceechHHHHHHHHHHHhCCCCCceEEEe-----C----CC
Confidence 4566777789998874321 124678889865432 2224567788888888543333 344432 1 14
Q ss_pred EEeecccCCCHHHH-----------------HhhcCCC--CC---CCC--HHHHHH------------------------
Q 011508 240 LVYELMVNGSLEEW-----------------LHLNRDA--PR---NLN--LLQRLS------------------------ 271 (484)
Q Consensus 240 lv~e~~~~gsL~~~-----------------l~~~~~~--~~---~l~--~~~~~~------------------------ 271 (484)
+|+||++|.++... ++..... .. ..+ +.....
T Consensus 74 ~v~e~i~G~~l~~~~~~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (302)
T cd05156 74 RIEEFIPSRTLTTEELRDPDISAEIARRMAKLHSIVVPLSPEERDLTPAIWKLLKQWLDLAETVIEIVDSDSEKLLEVEL 153 (302)
T ss_pred chhheeCCCcCCHhHcCCcHHHHHHHHHHHHhhCCCCCCCCCcCcccchHHHHHHHHHHHhhhhhhhcccchhhhhhhhH
Confidence 68999887765321 1111111 00 011 111101
Q ss_pred --HHHHHHHHHHHHHh------cCCCCeeecCCCCCCeeecCC----CceEEcccCcccc
Q 011508 272 --IAVDVASTLEYLHH------YCETPIVHCDLKPSNVLLDGE----LTAHVSDFGLAKF 319 (484)
Q Consensus 272 --i~~~i~~~l~~LH~------~~~~~ivH~dlk~~NIll~~~----~~~kl~Dfg~a~~ 319 (484)
+...+...+..+.. .....++|+|+.+.||+++++ +.++++||..+..
T Consensus 154 ~~~~~~~~~~~~~l~~~~~~~~~~~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~ 213 (302)
T cd05156 154 SLFLEDEAKYLRFLLESTSEESGSPVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASY 213 (302)
T ss_pred HHHHHHHHHHHHHHHhhccCCCCCCceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCC
Confidence 11122222333431 125678999999999999985 7899999998763
No 500
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.35 E-value=0.00099 Score=63.32 Aligned_cols=149 Identities=21% Similarity=0.162 Sum_probs=84.0
Q ss_pred cCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCC--ceeEeeeeeeec-cCCCceeeE
Q 011508 164 ENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRN--LVKIITSCVSVD-FQGNDFEAL 240 (484)
Q Consensus 164 ~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~~~~~~~~~-~~~~~~~~l 240 (484)
.+.|..|....+|+.... +..+++|+... ........|++++..+.+.+ +.+++....... ...++..+.
T Consensus 19 i~~i~~G~~n~~y~v~~~----~~~~vLr~~~~---~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~ 91 (296)
T cd05153 19 FEGISAGIENTNYFVTTD----SGRYVLTLFEK---VSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAA 91 (296)
T ss_pred eecccCccccceEEEEeC----CCcEEEEEcCC---CChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEE
Confidence 456888888899998643 23588888754 23355667888888774332 344443211000 112335689
Q ss_pred EeecccCCCHHH----H----------Hhhc----CCC---CCCCCHHHHH----------HHHHHHHHHHHHHHh----
Q 011508 241 VYELMVNGSLEE----W----------LHLN----RDA---PRNLNLLQRL----------SIAVDVASTLEYLHH---- 285 (484)
Q Consensus 241 v~e~~~~gsL~~----~----------l~~~----~~~---~~~l~~~~~~----------~i~~~i~~~l~~LH~---- 285 (484)
|+++++|..+.. . ++.. ... .....|.... .....+..++.++..
T Consensus 92 l~~~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~ 171 (296)
T cd05153 92 LVEFLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPS 171 (296)
T ss_pred EEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhh
Confidence 999998865421 0 1110 000 0111222111 011122334444442
Q ss_pred cCCCCeeecCCCCCCeeecCCCceEEcccCcccc
Q 011508 286 YCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKF 319 (484)
Q Consensus 286 ~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~ 319 (484)
....+++|+|+.|.||+++++..+.|.||+.+..
T Consensus 172 ~~~~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~~ 205 (296)
T cd05153 172 DLPRGVIHADLFRDNVLFDGDELSGVIDFYFACT 205 (296)
T ss_pred cCCCcCCccCcCcccEEEeCCceEEEeehhhhcC
Confidence 1135799999999999999987778999997753
Done!