Query 011508
Match_columns 484
No_of_seqs 633 out of 4548
Neff 10.1
Searched_HMMs 29240
Date Mon Mar 25 09:35:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011508.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011508hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4asz_A BDNF/NT-3 growth factor 100.0 2.3E-58 7.7E-63 434.7 13.8 265 159-469 13-290 (299)
2 4aoj_A High affinity nerve gro 100.0 1.7E-57 5.9E-62 434.6 17.0 265 159-469 41-320 (329)
3 3omv_A RAF proto-oncogene seri 100.0 8.1E-57 2.8E-61 424.0 18.5 264 158-471 35-303 (307)
4 4gt4_A Tyrosine-protein kinase 100.0 4.3E-57 1.5E-61 427.8 14.0 261 160-466 27-304 (308)
5 4fih_A Serine/threonine-protei 100.0 2.1E-55 7.1E-60 419.4 16.8 250 159-461 74-323 (346)
6 4ase_A Vascular endothelial gr 100.0 2.4E-55 8.3E-60 423.0 16.4 274 152-469 57-348 (353)
7 3hmm_A TGF-beta receptor type- 100.0 6.4E-55 2.2E-59 414.0 18.9 283 159-469 3-298 (303)
8 4g3f_A NF-kappa-beta-inducing 100.0 6.6E-55 2.2E-59 414.8 18.4 260 159-470 58-318 (336)
9 4b9d_A Serine/threonine-protei 100.0 2.7E-55 9.2E-60 419.3 15.2 251 159-461 24-276 (350)
10 3fpq_A Serine/threonine-protei 100.0 1.6E-54 5.6E-59 405.4 19.9 249 162-461 29-282 (290)
11 4aw0_A HPDK1, 3-phosphoinositi 100.0 4.6E-55 1.6E-59 410.9 11.1 250 159-461 32-284 (311)
12 4fie_A Serine/threonine-protei 100.0 4.1E-54 1.4E-58 420.5 17.4 250 159-461 151-400 (423)
13 3hyh_A Carbon catabolite-derep 100.0 8.7E-54 3E-58 396.9 17.1 247 159-462 13-263 (275)
14 3ubd_A Ribosomal protein S6 ki 100.0 1.4E-53 4.8E-58 400.9 9.3 250 159-461 24-281 (304)
15 4g31_A Eukaryotic translation 100.0 2E-52 6.9E-57 394.8 15.0 261 160-461 6-279 (299)
16 4b99_A Mitogen-activated prote 100.0 1.2E-49 4E-54 390.1 16.5 285 158-461 53-344 (398)
17 4f9c_A Cell division cycle 7-r 100.0 7.6E-49 2.6E-53 380.4 17.6 208 156-380 18-250 (361)
18 2qkw_B Protein kinase; three-h 100.0 2.6E-47 8.8E-52 367.0 20.8 286 148-468 28-315 (321)
19 3uto_A Twitchin; kinase, muscl 100.0 9.1E-48 3.1E-52 394.9 17.8 252 159-461 157-410 (573)
20 3uim_A Brassinosteroid insensi 100.0 1.8E-47 6.1E-52 368.9 18.6 288 145-465 16-308 (326)
21 3v5w_A G-protein coupled recep 100.0 1.7E-47 5.8E-52 390.2 18.1 249 159-461 189-449 (689)
22 3s95_A LIMK-1, LIM domain kina 100.0 7.4E-47 2.5E-51 362.0 18.2 276 158-477 9-291 (310)
23 3soc_A Activin receptor type-2 100.0 6.9E-46 2.4E-50 357.0 19.3 281 156-469 21-319 (322)
24 3fxz_A Serine/threonine-protei 100.0 1.1E-45 3.6E-50 351.4 18.8 251 158-461 19-269 (297)
25 3ugc_A Tyrosine-protein kinase 100.0 3E-46 1E-50 355.2 13.7 281 158-470 9-293 (295)
26 3op5_A Serine/threonine-protei 100.0 1.6E-45 5.4E-50 360.7 17.8 284 157-471 33-332 (364)
27 2psq_A Fibroblast growth facto 100.0 3.2E-45 1.1E-49 358.7 19.4 267 158-470 80-366 (370)
28 3kul_A Ephrin type-A receptor 100.0 7.3E-46 2.5E-50 357.1 14.4 266 158-471 48-316 (325)
29 2nru_A Interleukin-1 receptor- 100.0 2.7E-44 9.2E-49 343.7 24.5 283 146-468 12-306 (307)
30 3vhe_A Vascular endothelial gr 100.0 1.7E-45 5.7E-50 360.0 16.0 279 148-470 11-357 (359)
31 3q4u_A Activin receptor type-1 100.0 9.1E-45 3.1E-49 345.9 20.4 271 158-466 7-300 (301)
32 3p86_A Serine/threonine-protei 100.0 4.7E-45 1.6E-49 348.7 17.5 263 156-470 34-300 (309)
33 3l9p_A Anaplastic lymphoma kin 100.0 1.4E-45 4.7E-50 361.1 13.2 277 159-481 71-358 (367)
34 3fe3_A MAP/microtubule affinit 100.0 3.8E-45 1.3E-49 351.8 15.9 250 157-462 13-265 (328)
35 3zgw_A Maternal embryonic leuc 100.0 3.7E-45 1.3E-49 353.9 15.4 252 157-462 8-261 (347)
36 2c30_A Serine/threonine-protei 100.0 2E-44 6.9E-49 346.4 20.3 262 148-462 24-295 (321)
37 3lb7_A RAF proto-oncogene seri 100.0 1.7E-44 5.8E-49 344.7 18.5 265 157-471 34-303 (307)
38 3g2f_A Bone morphogenetic prot 100.0 9E-45 3.1E-49 351.6 16.1 295 158-480 12-330 (336)
39 4hcu_A Tyrosine-protein kinase 100.0 1.9E-44 6.4E-49 338.1 17.4 257 158-468 9-266 (269)
40 2izr_A Casein kinase I isoform 100.0 2.9E-44 1E-48 347.0 18.7 271 158-471 8-284 (330)
41 2qol_A Ephrin receptor; recept 100.0 6.3E-45 2.1E-49 356.9 14.2 265 158-470 44-311 (373)
42 3cbl_A C-FES, proto-oncogene t 100.0 2E-45 6.7E-50 361.4 10.1 262 157-469 112-375 (377)
43 4eqm_A Protein kinase; transfe 100.0 3.4E-44 1.2E-48 340.6 17.5 261 158-467 10-274 (294)
44 1o6l_A RAC-beta serine/threoni 100.0 3.4E-44 1.2E-48 346.1 17.8 249 159-462 5-261 (337)
45 2yab_A Death-associated protei 100.0 3.9E-44 1.3E-48 348.9 18.3 252 158-461 11-272 (361)
46 3c1x_A Hepatocyte growth facto 100.0 1E-44 3.6E-49 354.9 14.2 277 160-482 90-370 (373)
47 1k9a_A Carboxyl-terminal SRC k 100.0 3.8E-44 1.3E-48 360.2 18.4 255 157-469 191-446 (450)
48 4f0f_A Serine/threonine-protei 100.0 6E-44 2E-48 337.9 18.7 253 158-465 18-286 (287)
49 1csn_A Casein kinase-1; phosph 100.0 9.4E-44 3.2E-48 338.4 20.0 272 158-473 9-288 (298)
50 1luf_A Muscle-specific tyrosin 100.0 1.2E-44 4E-49 351.7 13.7 270 156-471 44-338 (343)
51 3tki_A Serine/threonine-protei 100.0 1.6E-44 5.4E-49 347.3 14.4 255 158-462 6-262 (323)
52 4euu_A Serine/threonine-protei 100.0 1E-43 3.5E-48 341.5 19.8 284 158-466 8-307 (319)
53 3lxp_A Non-receptor tyrosine-p 100.0 1.2E-44 4E-49 347.8 13.2 278 161-472 33-314 (318)
54 3sxs_A Cytoplasmic tyrosine-pr 100.0 8.5E-45 2.9E-49 340.2 11.8 259 157-469 6-265 (268)
55 1tki_A Titin; serine kinase, m 100.0 6E-44 2.1E-48 342.9 17.8 253 158-462 4-258 (321)
56 3tt0_A Basic fibroblast growth 100.0 1E-43 3.5E-48 349.9 19.4 268 158-471 68-355 (382)
57 3c0i_A Peripheral plasma membr 100.0 1.8E-44 6.3E-49 351.0 13.8 255 159-461 24-286 (351)
58 3gen_A Tyrosine-protein kinase 100.0 8E-44 2.7E-48 336.3 17.7 259 157-469 22-281 (283)
59 3poz_A Epidermal growth factor 100.0 2E-44 6.7E-49 347.6 13.7 263 158-470 14-280 (327)
60 3brb_A Proto-oncogene tyrosine 100.0 4.7E-44 1.6E-48 343.0 16.1 279 152-471 27-311 (313)
61 3mdy_A Bone morphogenetic prot 100.0 4.6E-43 1.6E-47 339.6 22.8 272 158-470 36-333 (337)
62 1rjb_A FL cytokine receptor; k 100.0 4.6E-44 1.6E-48 347.7 15.8 271 157-472 43-338 (344)
63 3uzp_A CKI-delta, CKID, casein 100.0 2.3E-43 8E-48 335.3 20.2 273 157-472 7-284 (296)
64 4hgt_A Casein kinase I isoform 100.0 1.9E-43 6.5E-48 335.9 19.6 275 156-473 6-285 (296)
65 3h4j_B AMPK kdaid, SNF1-like p 100.0 5.3E-44 1.8E-48 344.5 15.9 248 158-462 8-259 (336)
66 4dc2_A Protein kinase C IOTA t 100.0 9.5E-44 3.3E-48 349.2 17.6 250 158-456 51-307 (396)
67 3lxl_A Tyrosine-protein kinase 100.0 1.2E-44 4.1E-49 349.3 10.9 281 158-470 22-305 (327)
68 2eva_A TAK1 kinase - TAB1 chim 100.0 1E-43 3.6E-48 339.4 17.4 258 159-471 8-266 (307)
69 2y0a_A Death-associated protei 100.0 1.7E-43 5.9E-48 340.7 19.0 251 159-461 11-271 (326)
70 2ivs_A Proto-oncogene tyrosine 100.0 1.2E-43 4E-48 340.3 17.8 267 157-469 21-312 (314)
71 2buj_A Serine/threonine-protei 100.0 3.6E-44 1.2E-48 344.4 14.2 274 157-467 27-305 (317)
72 3qup_A Tyrosine-protein kinase 100.0 2.5E-44 8.5E-49 346.5 13.0 275 155-470 19-300 (323)
73 1mp8_A Focal adhesion kinase 1 100.0 3.9E-44 1.3E-48 338.1 14.0 263 157-470 13-278 (281)
74 1t46_A HOMO sapiens V-KIT hard 100.0 8.3E-44 2.9E-48 341.2 16.5 269 157-470 21-309 (313)
75 1qcf_A Haematopoetic cell kina 100.0 9.7E-45 3.3E-49 365.1 10.2 262 154-469 183-445 (454)
76 2v62_A Serine/threonine-protei 100.0 5.2E-44 1.8E-48 347.3 14.9 278 158-467 36-327 (345)
77 3g33_A Cell division protein k 100.0 3.6E-43 1.2E-47 336.0 20.1 282 157-461 7-296 (308)
78 2zv2_A Calcium/calmodulin-depe 100.0 1.7E-43 5.9E-48 336.6 17.8 252 158-461 12-292 (298)
79 3f66_A Hepatocyte growth facto 100.0 1.2E-43 4E-48 337.8 16.4 267 159-471 25-294 (298)
80 2wqm_A Serine/threonine-protei 100.0 1.4E-43 4.8E-48 339.2 17.0 269 158-473 31-302 (310)
81 1fot_A TPK1 delta, CAMP-depend 100.0 1.6E-43 5.5E-48 339.0 17.3 245 159-461 6-258 (318)
82 2pmi_A Negative RE, cyclin-dep 100.0 2.2E-43 7.6E-48 338.7 18.3 282 158-461 4-293 (317)
83 4fr4_A YANK1, serine/threonine 100.0 2.5E-43 8.6E-48 345.1 19.0 250 159-461 15-271 (384)
84 3o0g_A Cell division protein k 100.0 1.7E-43 6E-48 335.5 17.3 278 159-461 2-282 (292)
85 1u59_A Tyrosine-protein kinase 100.0 2.6E-43 8.8E-48 333.5 18.3 271 158-477 8-281 (287)
86 2xir_A Vascular endothelial gr 100.0 1E-43 3.5E-48 341.1 15.7 278 149-470 17-312 (316)
87 1kob_A Twitchin; kinase, intra 100.0 2.3E-43 7.9E-48 346.5 18.5 254 158-462 50-305 (387)
88 3og7_A AKAP9-BRAF fusion prote 100.0 1.3E-43 4.6E-48 335.8 16.1 261 157-467 22-287 (289)
89 3txo_A PKC-L, NPKC-ETA, protei 100.0 4E-44 1.4E-48 347.9 12.4 250 157-461 21-280 (353)
90 3soa_A Calcium/calmodulin-depe 100.0 2.8E-43 9.4E-48 351.7 18.6 253 158-461 10-267 (444)
91 1xbb_A Tyrosine-protein kinase 100.0 1.4E-43 4.7E-48 336.1 15.4 268 157-474 14-285 (291)
92 3niz_A Rhodanese family protei 100.0 3.3E-43 1.1E-47 336.5 17.9 276 157-461 19-300 (311)
93 2ac3_A MAP kinase-interacting 100.0 2.1E-43 7.1E-48 339.0 16.6 274 158-462 11-296 (316)
94 2bdw_A Hypothetical protein K1 100.0 2.5E-43 8.6E-48 344.0 17.4 253 158-462 28-285 (362)
95 3ork_A Serine/threonine protei 100.0 7.1E-44 2.4E-48 341.3 13.2 265 158-466 11-279 (311)
96 3cc6_A Protein tyrosine kinase 100.0 2.2E-43 7.4E-48 333.0 16.4 263 157-470 10-275 (281)
97 1opk_A P150, C-ABL, proto-onco 100.0 7.3E-44 2.5E-48 362.1 14.0 258 157-466 218-476 (495)
98 2ozo_A Tyrosine-protein kinase 100.0 2.1E-43 7.3E-48 366.9 17.8 266 161-475 337-605 (613)
99 3gni_B Strad alpha; kinase fol 100.0 2.2E-43 7.6E-48 348.6 17.1 289 157-462 23-334 (389)
100 4e5w_A Tyrosine-protein kinase 100.0 5.6E-44 1.9E-48 340.6 12.3 277 159-467 21-301 (302)
101 2w1i_A JAK2; chromosomal rearr 100.0 2.8E-43 9.7E-48 339.5 17.1 278 159-471 41-325 (326)
102 3pls_A Macrophage-stimulating 100.0 6.8E-43 2.3E-47 332.4 19.4 269 160-473 22-292 (298)
103 2w4o_A Calcium/calmodulin-depe 100.0 1.6E-43 5.4E-48 344.0 15.3 252 157-461 51-305 (349)
104 3dtc_A Mitogen-activated prote 100.0 7.7E-44 2.6E-48 334.2 12.6 251 158-466 6-271 (271)
105 2jii_A Serine/threonine-protei 100.0 9E-44 3.1E-48 346.6 13.5 277 158-472 41-340 (352)
106 3kfa_A Tyrosine-protein kinase 100.0 1.2E-43 4.1E-48 336.0 13.9 263 156-470 10-273 (288)
107 3a8x_A Protein kinase C IOTA t 100.0 4.1E-43 1.4E-47 340.1 17.8 249 159-456 9-264 (345)
108 3v8s_A RHO-associated protein 100.0 1.4E-43 4.7E-48 350.0 14.5 260 152-462 62-330 (410)
109 2i1m_A Macrophage colony-stimu 100.0 1.2E-43 4.2E-48 343.1 13.8 274 155-473 42-331 (333)
110 3kmu_A ILK, integrin-linked ki 100.0 3E-43 1E-47 330.0 15.9 254 159-468 10-270 (271)
111 3t9t_A Tyrosine-protein kinase 100.0 3.3E-43 1.1E-47 329.1 16.0 257 158-468 7-264 (267)
112 1rdq_E PKA C-alpha, CAMP-depen 100.0 2.7E-43 9.2E-48 341.9 15.8 246 159-462 41-294 (350)
113 3uc3_A Serine/threonine-protei 100.0 5E-43 1.7E-47 342.0 17.7 255 157-462 18-275 (361)
114 3qd2_B Eukaryotic translation 100.0 5.5E-43 1.9E-47 338.3 17.5 262 159-461 6-325 (332)
115 3lzb_A Epidermal growth factor 100.0 2.6E-43 9E-48 339.5 15.1 263 158-470 14-280 (327)
116 1xjd_A Protein kinase C, theta 100.0 1.4E-43 4.9E-48 342.7 13.3 250 156-460 14-268 (345)
117 2x4f_A Myosin light chain kina 100.0 3.3E-43 1.1E-47 344.5 15.8 247 164-461 94-342 (373)
118 2i0e_A Protein kinase C-beta I 100.0 4.3E-43 1.5E-47 340.4 16.4 250 157-461 18-276 (353)
119 4fvq_A Tyrosine-protein kinase 100.0 5.6E-44 1.9E-48 338.4 9.9 256 158-469 7-276 (289)
120 1mqb_A Ephrin type-A receptor 100.0 3.3E-43 1.1E-47 339.9 15.4 266 158-471 43-312 (333)
121 3rp9_A Mitogen-activated prote 100.0 9.1E-43 3.1E-47 351.6 19.1 206 158-373 52-280 (458)
122 4aw2_A Serine/threonine-protei 100.0 3.6E-43 1.2E-47 349.6 15.8 266 149-462 64-339 (437)
123 2y94_A 5'-AMP-activated protei 100.0 5.8E-43 2E-47 351.6 17.4 249 158-462 15-267 (476)
124 1qpc_A LCK kinase; alpha beta 100.0 2.3E-43 7.9E-48 332.4 13.5 265 156-474 10-275 (279)
125 2pvf_A Fibroblast growth facto 100.0 8.4E-43 2.9E-47 337.3 17.7 268 158-471 34-321 (334)
126 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 6.2E-44 2.1E-48 358.8 9.9 260 156-469 181-441 (452)
127 4eut_A Serine/threonine-protei 100.0 3.4E-43 1.2E-47 347.7 15.1 287 158-469 8-310 (396)
128 3kex_A Receptor tyrosine-prote 100.0 3.5E-43 1.2E-47 338.6 14.7 262 159-470 13-278 (325)
129 3gxj_A TGF-beta receptor type- 100.0 1.8E-44 6.1E-49 344.2 5.6 273 159-469 3-298 (303)
130 3hko_A Calcium/calmodulin-depe 100.0 3.1E-43 1.1E-47 342.0 14.1 265 154-461 21-330 (345)
131 3dls_A PAS domain-containing s 100.0 3.7E-43 1.3E-47 339.4 14.4 243 158-462 23-275 (335)
132 3is5_A Calcium-dependent prote 100.0 2.9E-43 9.8E-48 332.8 13.3 253 159-461 22-278 (285)
133 1t4h_A Serine/threonine-protei 100.0 2.5E-42 8.4E-47 327.3 19.7 252 159-461 26-282 (290)
134 2a19_B Interferon-induced, dou 100.0 4E-43 1.4E-47 331.6 14.1 260 158-474 10-280 (284)
135 1fvr_A Tyrosine-protein kinase 100.0 8.4E-43 2.9E-47 336.3 16.7 263 159-470 25-302 (327)
136 2eue_A Carbon catabolite derep 100.0 8.2E-43 2.8E-47 328.0 15.9 247 159-462 13-263 (275)
137 1nxk_A MAP kinase-activated pr 100.0 1.9E-42 6.4E-47 342.3 19.0 255 159-462 61-322 (400)
138 3ttj_A Mitogen-activated prote 100.0 1.3E-42 4.5E-47 349.5 18.1 283 157-462 60-356 (464)
139 2yfx_A Tyrosine-protein kinase 100.0 6.3E-43 2.2E-47 337.2 15.2 278 158-481 29-317 (327)
140 3llt_A Serine/threonine kinase 100.0 1.1E-42 3.8E-47 340.1 17.0 212 145-380 21-262 (360)
141 1ob3_A PFPK5, cell division co 100.0 1.3E-42 4.4E-47 328.9 16.8 268 159-461 2-280 (288)
142 2h34_A Serine/threonine-protei 100.0 1.5E-42 5.1E-47 331.7 17.4 262 158-470 33-298 (309)
143 4fl3_A Tyrosine-protein kinase 100.0 5.2E-43 1.8E-47 364.9 15.4 256 165-470 375-633 (635)
144 3p1a_A MYT1 kinase, membrane-a 100.0 5.6E-43 1.9E-47 335.0 14.3 245 159-461 57-304 (311)
145 2a2a_A Death-associated protei 100.0 2.4E-42 8.1E-47 332.3 18.6 252 158-461 11-272 (321)
146 3f3z_A Calcium/calmodulin-depe 100.0 1.6E-42 5.5E-47 326.3 17.0 252 158-462 8-262 (277)
147 3ll6_A Cyclin G-associated kin 100.0 1.5E-42 5.2E-47 335.9 17.3 271 157-470 26-310 (337)
148 1byg_A CSK, protein (C-termina 100.0 5.7E-43 2E-47 329.6 13.9 254 158-469 20-274 (278)
149 1b6c_B TGF-B superfamily recep 100.0 3.1E-42 1.1E-46 334.5 19.2 276 157-470 40-338 (342)
150 2vd5_A DMPK protein; serine/th 100.0 5.4E-43 1.9E-47 345.9 13.8 265 149-462 51-328 (412)
151 3cok_A Serine/threonine-protei 100.0 1.5E-42 5.1E-47 326.7 15.8 249 159-461 11-262 (278)
152 3kn6_A Ribosomal protein S6 ki 100.0 6.3E-43 2.1E-47 336.5 13.5 249 164-461 16-270 (325)
153 2r5t_A Serine/threonine-protei 100.0 4.7E-43 1.6E-47 342.6 12.7 251 158-463 37-291 (373)
154 3kk8_A Calcium/calmodulin depe 100.0 4.7E-42 1.6E-46 324.3 19.1 253 158-462 5-262 (284)
155 2yex_A Serine/threonine-protei 100.0 1.7E-42 5.8E-47 325.9 16.0 253 159-461 7-261 (276)
156 3a62_A Ribosomal protein S6 ki 100.0 1.5E-42 5.2E-47 334.2 16.0 251 158-461 16-276 (327)
157 3fdn_A Serine/threonine-protei 100.0 1.6E-42 5.4E-47 326.7 15.7 249 157-462 7-258 (279)
158 3sv0_A Casein kinase I-like; t 100.0 4.3E-42 1.5E-46 345.9 19.8 272 158-470 6-280 (483)
159 3oz6_A Mitogen-activated prote 100.0 1.1E-42 3.7E-47 343.6 15.0 210 157-380 7-234 (388)
160 1p4o_A Insulin-like growth fac 100.0 1.4E-42 4.7E-47 334.1 15.4 271 152-468 18-299 (322)
161 4ejn_A RAC-alpha serine/threon 100.0 5.5E-43 1.9E-47 351.8 12.6 249 158-461 147-404 (446)
162 3eb0_A Putative uncharacterize 100.0 3.2E-42 1.1E-46 339.5 17.8 288 156-468 4-330 (383)
163 3dbq_A Dual specificity protei 100.0 9E-43 3.1E-47 338.3 13.5 252 158-462 8-274 (343)
164 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.5E-42 5.3E-47 339.6 15.0 261 156-470 62-341 (365)
165 3i6u_A CDS1, serine/threonine- 100.0 2E-42 6.9E-47 344.4 15.9 254 157-462 133-400 (419)
166 3byv_A Rhoptry kinase; malaria 100.0 1E-43 3.6E-48 349.3 6.5 259 158-471 72-371 (377)
167 2w5a_A Serine/threonine-protei 100.0 7.4E-43 2.5E-47 329.0 12.1 258 158-463 5-269 (279)
168 1u5q_A Serine/threonine protei 100.0 2.7E-42 9.1E-47 334.9 16.3 247 159-462 54-306 (348)
169 3c4z_A Rhodopsin kinase; Ser/T 100.0 3.3E-42 1.1E-46 349.9 17.4 257 158-461 184-448 (543)
170 3mi9_A Cell division protein k 100.0 6.6E-42 2.2E-46 333.4 18.3 286 159-462 17-312 (351)
171 4agu_A Cyclin-dependent kinase 100.0 2.9E-42 9.9E-47 330.2 15.5 277 159-462 3-285 (311)
172 3nsz_A CK II alpha, casein kin 100.0 4.3E-42 1.5E-46 331.8 16.8 278 158-461 35-319 (330)
173 2h8h_A Proto-oncogene tyrosine 100.0 4.4E-43 1.5E-47 359.5 10.3 258 156-467 264-522 (535)
174 2vgo_A Serine/threonine-protei 100.0 6.5E-42 2.2E-46 323.4 17.2 247 159-462 14-263 (284)
175 2acx_A G protein-coupled recep 100.0 4.2E-42 1.5E-46 349.9 17.0 256 157-462 182-445 (576)
176 3fme_A Dual specificity mitoge 100.0 1.2E-42 4.1E-47 329.4 12.1 254 158-461 6-266 (290)
177 2clq_A Mitogen-activated prote 100.0 7.2E-42 2.5E-46 324.9 17.3 253 160-461 23-278 (295)
178 2zmd_A Dual specificity protei 100.0 3E-42 1E-46 339.8 15.2 251 159-462 56-321 (390)
179 3an0_A Dual specificity mitoge 100.0 7.5E-43 2.6E-47 338.6 10.7 258 155-462 47-311 (340)
180 3n9x_A Phosphotransferase; mal 100.0 6.1E-42 2.1E-46 342.4 17.6 212 157-378 24-253 (432)
181 3bhy_A Death-associated protei 100.0 1.1E-41 3.7E-46 321.7 18.3 257 159-467 5-273 (283)
182 2jam_A Calcium/calmodulin-depe 100.0 6.8E-42 2.3E-46 326.5 16.4 251 158-461 8-261 (304)
183 3qyz_A Mitogen-activated prote 100.0 1.2E-41 4E-46 333.2 18.5 286 155-461 23-313 (364)
184 2rku_A Serine/threonine-protei 100.0 5.5E-42 1.9E-46 325.6 15.5 250 158-462 14-266 (294)
185 2qr7_A Ribosomal protein S6 ki 100.0 3.1E-42 1.1E-46 333.5 13.9 254 157-462 20-278 (342)
186 3mtl_A Cell division protein k 100.0 8.2E-43 2.8E-47 335.8 9.5 278 159-461 2-281 (324)
187 3gbz_A Kinase, CMGC CDK; ssgci 100.0 2.2E-42 7.4E-47 333.6 12.4 276 156-461 31-318 (329)
188 3a7i_A MST3 kinase, serine/thr 100.0 1.3E-41 4.6E-46 324.3 17.8 251 158-463 21-272 (303)
189 3pg1_A Mitogen-activated prote 100.0 4.7E-42 1.6E-46 335.9 14.8 284 148-462 11-317 (362)
190 1u46_A ACK-1, activated CDC42 100.0 4.6E-42 1.6E-46 325.5 14.3 264 158-469 17-285 (291)
191 1cm8_A Phosphorylated MAP kina 100.0 5.4E-42 1.8E-46 335.4 15.0 279 157-461 23-307 (367)
192 3eqc_A Dual specificity mitoge 100.0 2.8E-42 9.4E-47 337.3 12.9 200 158-380 32-233 (360)
193 2owb_A Serine/threonine-protei 100.0 4.7E-42 1.6E-46 332.1 14.1 250 158-462 40-292 (335)
194 1x8b_A WEE1HU, WEE1-like prote 100.0 7.3E-42 2.5E-46 323.5 14.8 248 158-462 10-280 (289)
195 2x7f_A TRAF2 and NCK-interacti 100.0 7E-42 2.4E-46 329.8 14.8 267 148-461 13-286 (326)
196 1j1b_A Glycogen synthase kinas 100.0 1.6E-41 5.5E-46 338.0 17.7 278 159-462 54-337 (420)
197 3mwu_A Calmodulin-domain prote 100.0 2E-41 6.8E-46 344.2 18.1 252 158-462 21-277 (486)
198 2j7t_A Serine/threonine-protei 100.0 6E-42 2.1E-46 326.6 13.4 254 157-461 17-275 (302)
199 3lm5_A Serine/threonine-protei 100.0 9.2E-42 3.1E-46 328.9 14.8 264 149-462 18-288 (327)
200 2h6d_A 5'-AMP-activated protei 100.0 1.4E-41 4.7E-46 319.8 15.6 249 158-462 10-262 (276)
201 1ua2_A CAK, cell division prot 100.0 1.1E-41 3.6E-46 331.1 15.3 279 156-462 7-292 (346)
202 3rgf_A Cyclin-dependent kinase 100.0 8.6E-42 2.9E-46 339.0 14.9 208 160-380 21-239 (405)
203 4aaa_A Cyclin-dependent kinase 100.0 5.3E-42 1.8E-46 331.3 13.0 273 158-462 24-307 (331)
204 3pfq_A PKC-B, PKC-beta, protei 100.0 1.9E-41 6.4E-46 355.5 18.2 250 157-461 339-597 (674)
205 2xrw_A Mitogen-activated prote 100.0 1.6E-41 5.4E-46 332.9 16.4 284 158-462 24-319 (371)
206 2vwi_A Serine/threonine-protei 100.0 2.4E-42 8.1E-47 329.5 10.2 269 156-461 12-287 (303)
207 3lij_A Calcium/calmodulin depe 100.0 2.2E-41 7.7E-46 344.4 18.0 251 159-462 37-292 (494)
208 3nyv_A Calmodulin-domain prote 100.0 1E-41 3.6E-46 346.3 14.9 251 159-462 26-282 (484)
209 2y7j_A Phosphorylase B kinase 100.0 4.8E-41 1.6E-45 328.6 18.9 255 155-461 90-359 (365)
210 1wak_A Serine/threonine-protei 100.0 2.3E-41 8E-46 335.2 16.9 284 158-461 36-391 (397)
211 3q5i_A Protein kinase; CDPK, m 100.0 3.4E-41 1.2E-45 343.9 18.4 253 157-462 34-302 (504)
212 2b9h_A MAP kinase FUS3, mitoge 100.0 1.1E-41 3.8E-46 332.1 14.2 288 157-461 9-305 (353)
213 3com_A Serine/threonine-protei 100.0 3.6E-41 1.2E-45 323.1 17.4 252 157-461 27-278 (314)
214 3e3p_A Protein kinase, putativ 100.0 3.7E-41 1.3E-45 329.3 17.9 291 154-462 18-315 (360)
215 1vzo_A Ribosomal protein S6 ki 100.0 1.2E-41 4.1E-46 331.7 14.0 257 159-463 54-323 (355)
216 2ycf_A Serine/threonine-protei 100.0 1.6E-41 5.6E-46 326.6 14.6 252 158-461 9-274 (322)
217 3q60_A ROP5B; pseudokinase, tr 100.0 8.4E-42 2.9E-46 335.1 12.7 267 159-470 62-363 (371)
218 2wtk_C Serine/threonine-protei 100.0 6.5E-41 2.2E-45 319.9 18.4 255 158-462 4-264 (305)
219 4e7w_A Glycogen synthase kinas 100.0 3.7E-41 1.3E-45 332.7 17.2 276 159-462 40-322 (394)
220 3kvw_A DYRK2, dual specificity 100.0 1.9E-41 6.3E-46 338.3 14.8 199 158-380 96-302 (429)
221 2fst_X Mitogen-activated prote 100.0 5.8E-42 2E-46 334.9 10.9 279 157-462 27-312 (367)
222 2j0j_A Focal adhesion kinase 1 100.0 2.2E-41 7.6E-46 353.9 15.0 263 157-470 388-653 (656)
223 1phk_A Phosphorylase kinase; g 100.0 8.6E-41 2.9E-45 317.9 17.5 253 157-461 15-283 (298)
224 1blx_A Cyclin-dependent kinase 100.0 1.5E-40 5E-45 320.5 19.1 282 156-461 8-296 (326)
225 2i6l_A Mitogen-activated prote 100.0 7.9E-41 2.7E-45 321.4 16.8 279 158-462 10-306 (320)
226 2r3i_A Cell division protein k 100.0 1.2E-40 4.1E-45 317.1 16.8 278 159-461 3-283 (299)
227 2pml_X PFPK7, Ser/Thr protein 100.0 3E-41 1E-45 328.4 12.8 264 158-461 30-322 (348)
228 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.2E-41 4.1E-46 327.1 9.5 266 155-471 29-305 (319)
229 4exu_A Mitogen-activated prote 100.0 5.8E-41 2E-45 328.9 14.1 279 157-462 40-324 (371)
230 3cek_A Dual specificity protei 100.0 3.3E-41 1.1E-45 323.2 11.1 263 147-462 16-293 (313)
231 1q8y_A SR protein kinase; tran 100.0 9.7E-41 3.3E-45 328.0 14.7 283 158-461 18-333 (373)
232 2wei_A Calmodulin-domain prote 100.0 2.7E-40 9.2E-45 312.8 16.4 252 158-462 21-277 (287)
233 3fhr_A MAP kinase-activated pr 100.0 2.1E-40 7.3E-45 320.4 15.9 259 157-462 26-288 (336)
234 3aln_A Dual specificity mitoge 100.0 7.8E-41 2.7E-45 322.6 12.3 258 158-462 21-286 (327)
235 1z57_A Dual specificity protei 100.0 4.1E-40 1.4E-44 319.0 17.1 280 158-462 13-329 (339)
236 1zy4_A Serine/threonine-protei 100.0 3.8E-40 1.3E-44 314.0 16.0 264 158-462 5-284 (303)
237 2vx3_A Dual specificity tyrosi 100.0 3.7E-40 1.3E-44 324.6 16.0 203 156-380 51-261 (382)
238 2iwi_A Serine/threonine-protei 100.0 1.3E-40 4.5E-45 318.8 11.5 245 155-462 27-284 (312)
239 3a99_A Proto-oncogene serine/t 100.0 1.1E-40 3.6E-45 320.5 10.4 244 156-462 40-294 (320)
240 3coi_A Mitogen-activated prote 100.0 8.8E-40 3E-44 318.6 16.3 278 158-462 23-306 (353)
241 3qa8_A MGC80376 protein; kinas 100.0 3.8E-40 1.3E-44 338.7 14.2 284 159-467 14-308 (676)
242 2eu9_A Dual specificity protei 100.0 1.7E-39 5.8E-44 316.8 17.8 280 158-461 18-333 (355)
243 2rio_A Serine/threonine-protei 100.0 6.2E-40 2.1E-44 327.9 14.4 256 159-461 15-295 (434)
244 2dyl_A Dual specificity mitoge 100.0 1.7E-39 6E-44 311.8 13.7 253 158-462 24-284 (318)
245 3p23_A Serine/threonine-protei 100.0 2.7E-39 9.4E-44 322.4 15.5 252 157-461 22-283 (432)
246 3uqc_A Probable conserved tran 100.0 2.4E-39 8.4E-44 305.4 14.1 235 159-471 31-268 (286)
247 3dzo_A Rhoptry kinase domain; 100.0 1.9E-39 6.4E-44 322.4 10.9 250 158-462 77-364 (413)
248 2pzi_A Probable serine/threoni 100.0 5.7E-39 1.9E-43 338.8 14.8 250 158-470 79-330 (681)
249 3m2w_A MAP kinase-activated pr 100.0 9.7E-38 3.3E-42 297.0 16.3 236 159-462 17-257 (299)
250 2vuw_A Serine/threonine-protei 100.0 4.5E-37 1.5E-41 297.4 5.6 248 158-460 19-329 (336)
251 4azs_A Methyltransferase WBDD; 100.0 1.7E-30 5.7E-35 266.8 5.4 186 166-376 241-437 (569)
252 3en9_A Glycoprotease, O-sialog 99.9 5.8E-28 2E-32 246.6 4.0 191 162-378 339-539 (540)
253 1zar_A RIO2 kinase; serine kin 99.9 2.4E-24 8.1E-29 201.8 6.2 143 150-319 81-241 (282)
254 1zth_A RIO1 serine protein kin 99.8 2.2E-19 7.5E-24 166.0 10.4 146 153-320 41-219 (258)
255 4gyi_A RIO2 kinase; protein ki 99.7 1.1E-17 3.6E-22 160.7 3.6 144 152-320 88-265 (397)
256 3rgz_A Protein brassinosteroid 99.4 1.1E-13 3.9E-18 147.8 8.2 83 1-83 663-745 (768)
257 3tm0_A Aminoglycoside 3'-phosp 99.3 3.7E-12 1.3E-16 117.8 9.7 144 158-319 13-213 (263)
258 3rgz_A Protein brassinosteroid 99.3 4.4E-12 1.5E-16 135.6 7.0 83 1-84 639-722 (768)
259 1ogq_A PGIP-2, polygalacturona 99.2 1.2E-11 4E-16 117.6 6.8 83 1-84 228-310 (313)
260 3g39_A Variable lymphocyte rec 99.2 3.5E-11 1.2E-15 103.3 7.4 80 1-80 37-117 (170)
261 2r9u_A Variable lymphocyte rec 99.2 4.1E-11 1.4E-15 103.2 7.5 79 1-79 40-119 (174)
262 1nd4_A Aminoglycoside 3'-phosp 99.1 6.5E-11 2.2E-15 109.2 8.5 138 159-319 20-214 (264)
263 1w8a_A SLIT protein; signaling 99.1 5.1E-11 1.8E-15 104.5 7.3 80 1-81 36-117 (192)
264 3oja_A Leucine-rich immune mol 99.1 1.2E-12 4E-17 132.2 -4.7 80 1-82 127-207 (487)
265 2wfh_A SLIT homolog 2 protein 99.1 2.1E-10 7.3E-15 100.5 7.4 78 1-80 38-116 (193)
266 2v70_A SLIT-2, SLIT homolog 2 99.0 2.8E-10 9.7E-15 102.0 7.5 80 1-81 64-144 (220)
267 2ifg_A High affinity nerve gro 99.0 3.2E-10 1.1E-14 109.3 7.2 73 5-80 20-94 (347)
268 3dxp_A Putative acyl-COA dehyd 99.0 1.2E-09 4E-14 105.8 9.9 146 163-320 42-249 (359)
269 2wfh_A SLIT homolog 2 protein 99.0 9.8E-10 3.4E-14 96.3 8.0 70 2-75 18-88 (193)
270 1w8a_A SLIT protein; signaling 99.0 6.8E-10 2.3E-14 97.2 7.0 79 1-79 61-140 (192)
271 2o6r_A Variable lymphocyte rec 98.9 1.6E-09 5.3E-14 93.6 7.4 80 1-81 35-115 (177)
272 2v9t_B SLIT homolog 2 protein 98.9 1.4E-09 4.7E-14 97.5 7.2 79 1-81 63-143 (220)
273 1ogq_A PGIP-2, polygalacturona 98.9 1.1E-09 3.7E-14 103.9 6.7 82 1-83 57-142 (313)
274 2v70_A SLIT-2, SLIT homolog 2 98.9 1.7E-09 5.9E-14 96.9 7.4 81 1-82 39-121 (220)
275 3e6j_A Variable lymphocyte rec 98.9 1.6E-09 5.6E-14 97.7 7.1 79 1-80 71-149 (229)
276 2r9u_A Variable lymphocyte rec 98.9 1.8E-09 6.2E-14 92.8 7.0 77 1-81 19-96 (174)
277 4g8a_A TOLL-like receptor 4; l 98.9 1.5E-09 5.1E-14 113.2 7.4 80 1-80 501-582 (635)
278 1dce_A Protein (RAB geranylger 98.9 1.7E-09 5.8E-14 110.8 7.5 98 1-104 448-546 (567)
279 3sg8_A APH(2'')-ID; antibiotic 98.9 1E-09 3.6E-14 103.5 4.9 195 164-377 25-287 (304)
280 3g39_A Variable lymphocyte rec 98.9 2.7E-09 9.2E-14 91.4 7.0 78 1-82 16-94 (170)
281 1dce_A Protein (RAB geranylger 98.9 2.5E-09 8.5E-14 109.5 7.4 79 1-83 470-550 (567)
282 2je0_A Acidic leucine-rich nuc 98.9 1.8E-09 6.3E-14 90.2 5.2 77 1-80 24-102 (149)
283 2v9t_B SLIT homolog 2 protein 98.9 3.9E-09 1.3E-13 94.5 7.5 81 1-82 39-120 (220)
284 2ifg_A High affinity nerve gro 98.8 3.3E-09 1.1E-13 102.2 7.3 80 1-80 38-118 (347)
285 2o6r_A Variable lymphocyte rec 98.8 5.4E-09 1.8E-13 90.1 7.7 77 1-81 14-91 (177)
286 4eco_A Uncharacterized protein 98.8 2.9E-09 9.9E-14 111.1 6.4 81 1-83 88-266 (636)
287 3e6j_A Variable lymphocyte rec 98.8 8.2E-09 2.8E-13 93.0 8.6 77 1-79 47-125 (229)
288 4ecn_A Leucine-rich repeat pro 98.8 2.7E-09 9.2E-14 114.1 6.2 82 1-83 330-508 (876)
289 3m19_A Variable lymphocyte rec 98.8 5.8E-09 2E-13 95.5 7.4 80 1-81 90-170 (251)
290 2je0_A Acidic leucine-rich nuc 98.8 2.2E-09 7.6E-14 89.7 4.2 78 1-81 49-128 (149)
291 4fcg_A Uncharacterized protein 98.8 4.6E-09 1.6E-13 100.2 7.0 73 1-75 190-263 (328)
292 2o6s_A Variable lymphocyte rec 98.8 7E-09 2.4E-13 91.9 7.6 79 1-80 59-138 (208)
293 2ell_A Acidic leucine-rich nuc 98.8 3.3E-09 1.1E-13 90.6 5.3 77 1-80 31-109 (168)
294 3rfs_A Internalin B, repeat mo 98.8 7.4E-09 2.5E-13 96.0 7.6 81 1-82 116-197 (272)
295 4b8c_D Glucose-repressible alc 98.8 3.6E-09 1.2E-13 111.8 5.8 78 1-81 254-331 (727)
296 4ezg_A Putative uncharacterize 98.8 7.1E-09 2.4E-13 91.1 5.7 73 2-76 74-147 (197)
297 3m19_A Variable lymphocyte rec 98.8 1.3E-08 4.6E-13 93.0 7.7 78 1-79 42-120 (251)
298 2ell_A Acidic leucine-rich nuc 98.7 5.7E-09 2E-13 89.1 4.1 79 1-82 56-136 (168)
299 3rfs_A Internalin B, repeat mo 98.7 2.3E-08 7.8E-13 92.7 8.4 73 1-75 70-143 (272)
300 3zyi_A Leucine-rich repeat-con 98.7 1.3E-08 4.5E-13 101.7 7.1 81 1-81 225-306 (452)
301 3zyj_A Leucine-rich repeat-con 98.7 1.2E-08 4.2E-13 101.5 6.9 81 1-81 214-295 (440)
302 2o6s_A Variable lymphocyte rec 98.7 2.4E-08 8.1E-13 88.5 7.8 80 1-81 35-115 (208)
303 1p9a_G Platelet glycoprotein I 98.7 1.9E-08 6.5E-13 94.1 7.4 78 1-79 107-185 (290)
304 3v47_A TOLL-like receptor 5B a 98.7 1.8E-08 6E-13 100.8 7.6 79 1-80 306-385 (455)
305 4eco_A Uncharacterized protein 98.7 7.9E-09 2.7E-13 107.8 5.2 77 3-80 192-288 (636)
306 4b8c_D Glucose-repressible alc 98.7 1.9E-08 6.5E-13 106.2 7.7 106 1-111 231-336 (727)
307 4g8a_A TOLL-like receptor 4; l 98.7 3.6E-08 1.2E-12 102.7 9.8 79 1-80 59-138 (635)
308 1ozn_A Reticulon 4 receptor; N 98.7 1.4E-08 4.8E-13 94.8 5.9 79 1-80 136-215 (285)
309 4fcg_A Uncharacterized protein 98.7 1.4E-08 4.9E-13 96.8 5.8 82 1-84 213-295 (328)
310 2o6q_A Variable lymphocyte rec 98.7 2.9E-08 9.8E-13 91.9 7.5 79 1-80 116-195 (270)
311 3vq2_A TLR4, TOLL-like recepto 98.7 1.9E-08 6.5E-13 104.5 6.9 75 1-75 455-531 (606)
312 3j0a_A TOLL-like receptor 5; m 98.7 6.3E-09 2.1E-13 112.3 3.1 77 1-81 487-563 (844)
313 2z66_A Variable lymphocyte rec 98.6 3.4E-08 1.2E-12 93.1 7.2 81 1-82 157-239 (306)
314 4ecn_A Leucine-rich repeat pro 98.6 1.5E-08 5E-13 108.5 5.0 77 3-80 434-530 (876)
315 2z62_A TOLL-like receptor 4, v 98.6 9.5E-08 3.3E-12 88.6 9.9 79 1-80 35-114 (276)
316 1a9n_A U2A', U2A'; complex (nu 98.6 1.9E-08 6.3E-13 86.6 4.5 73 1-78 26-100 (176)
317 2xot_A Amphoterin-induced prot 98.6 4.1E-08 1.4E-12 95.0 7.3 78 1-79 46-125 (361)
318 1p9a_G Platelet glycoprotein I 98.6 4.7E-08 1.6E-12 91.4 7.5 72 1-75 62-134 (290)
319 3vq2_A TLR4, TOLL-like recepto 98.6 7.5E-08 2.6E-12 99.9 9.6 75 1-75 39-114 (606)
320 2z66_A Variable lymphocyte rec 98.6 4.8E-08 1.6E-12 92.1 6.6 79 1-80 133-213 (306)
321 2z81_A CD282 antigen, TOLL-lik 98.6 6.1E-08 2.1E-12 99.3 7.6 79 1-80 33-112 (549)
322 2z63_A TOLL-like receptor 4, v 98.6 4.3E-08 1.5E-12 100.9 6.4 81 1-82 428-510 (570)
323 3t6q_A CD180 antigen; protein- 98.6 3.4E-08 1.2E-12 102.5 5.7 74 1-75 456-533 (606)
324 2z7x_B TOLL-like receptor 1, v 98.6 6.2E-08 2.1E-12 98.6 7.4 77 1-80 28-104 (520)
325 4ezg_A Putative uncharacterize 98.6 4.9E-08 1.7E-12 85.6 5.7 79 1-80 95-173 (197)
326 3v47_A TOLL-like receptor 5B a 98.6 6.5E-08 2.2E-12 96.6 7.2 80 1-81 282-362 (455)
327 3r70_A Aminoglycoside phosphot 98.6 2.3E-07 7.8E-12 88.0 10.5 137 160-320 38-238 (320)
328 2xot_A Amphoterin-induced prot 98.6 6.1E-08 2.1E-12 93.8 6.5 80 1-81 71-151 (361)
329 1ozn_A Reticulon 4 receptor; N 98.6 1.1E-07 3.7E-12 88.7 7.8 79 1-80 87-167 (285)
330 4glp_A Monocyte differentiatio 98.5 6.1E-08 2.1E-12 91.6 5.9 76 1-80 204-286 (310)
331 3a79_B TLR6, VLRB.59, TOLL-lik 98.5 1.1E-07 3.9E-12 97.6 8.4 77 1-80 59-135 (562)
332 3oja_A Leucine-rich immune mol 98.5 8.8E-08 3E-12 96.5 7.3 77 1-80 151-228 (487)
333 1xku_A Decorin; proteoglycan, 98.5 1E-07 3.5E-12 90.9 7.4 75 1-75 199-273 (330)
334 2ft3_A Biglycan; proteoglycan, 98.5 1.4E-07 4.9E-12 89.9 8.3 79 1-80 200-278 (332)
335 1a9n_A U2A', U2A'; complex (nu 98.5 4E-08 1.4E-12 84.5 4.0 75 1-79 49-126 (176)
336 2id5_A Lingo-1, leucine rich r 98.5 7.5E-08 2.6E-12 96.9 6.5 73 2-75 232-306 (477)
337 3oja_B Anopheles plasmodium-re 98.5 9.7E-08 3.3E-12 98.9 7.5 75 1-75 82-157 (597)
338 3zyi_A Leucine-rich repeat-con 98.5 8.5E-08 2.9E-12 95.7 6.8 76 1-76 82-158 (452)
339 2o6q_A Variable lymphocyte rec 98.5 1.5E-07 5.1E-12 87.0 7.8 80 1-81 92-172 (270)
340 2z81_A CD282 antigen, TOLL-lik 98.5 6E-08 2.1E-12 99.4 5.6 76 1-76 57-134 (549)
341 1xku_A Decorin; proteoglycan, 98.5 1.6E-07 5.6E-12 89.5 8.2 81 1-82 223-310 (330)
342 1wwl_A Monocyte differentiatio 98.5 2.2E-08 7.4E-13 94.8 1.9 79 1-80 70-163 (312)
343 3j0a_A TOLL-like receptor 5; m 98.5 1E-07 3.5E-12 102.9 7.3 73 3-75 57-133 (844)
344 2z62_A TOLL-like receptor 4, v 98.5 1.3E-07 4.6E-12 87.6 7.1 70 3-75 16-86 (276)
345 2id5_A Lingo-1, leucine rich r 98.5 1.6E-07 5.3E-12 94.5 8.1 79 1-80 39-118 (477)
346 3t6q_A CD180 antigen; protein- 98.5 1.8E-07 6.2E-12 97.0 8.8 75 1-75 40-115 (606)
347 2ft3_A Biglycan; proteoglycan, 98.5 1.2E-07 4E-12 90.6 6.3 75 1-79 179-254 (332)
348 1ds9_A Outer arm dynein; leuci 98.5 1.3E-08 4.5E-13 89.4 -0.9 77 1-80 25-107 (198)
349 2z80_A TOLL-like receptor 2, v 98.5 1.1E-07 3.9E-12 91.5 5.6 75 1-75 59-134 (353)
350 3a79_B TLR6, VLRB.59, TOLL-lik 98.5 1.4E-07 4.9E-12 96.9 6.7 73 1-75 410-483 (562)
351 2z80_A TOLL-like receptor 2, v 98.5 1.2E-07 4.1E-12 91.3 5.6 77 1-78 83-162 (353)
352 1wwl_A Monocyte differentiatio 98.4 6.6E-08 2.3E-12 91.4 3.4 75 1-76 102-184 (312)
353 2z63_A TOLL-like receptor 4, v 98.4 4.5E-07 1.5E-11 93.2 9.9 75 1-75 35-110 (570)
354 4gkh_A Aminoglycoside 3'-phosp 98.4 1.2E-06 4E-11 80.9 11.5 136 166-319 31-223 (272)
355 3oja_B Anopheles plasmodium-re 98.4 2.4E-07 8.4E-12 95.8 7.4 79 1-81 106-186 (597)
356 3o6n_A APL1; leucine-rich repe 98.4 1.4E-07 4.7E-12 92.3 5.1 76 1-79 233-308 (390)
357 3o6n_A APL1; leucine-rich repe 98.4 3.1E-07 1.1E-11 89.7 7.5 62 14-75 65-127 (390)
358 3zyj_A Leucine-rich repeat-con 98.4 2.3E-07 7.8E-12 92.3 6.5 76 1-76 71-147 (440)
359 3rw6_A Nuclear RNA export fact 98.4 9E-08 3.1E-12 87.3 3.1 67 14-82 166-236 (267)
360 3d1u_A Putative fructosamine-3 98.4 1.4E-06 4.7E-11 81.1 11.2 76 163-250 19-97 (288)
361 2z7x_B TOLL-like receptor 1, v 98.4 2.4E-07 8.3E-12 94.2 6.6 76 1-79 381-457 (520)
362 3o53_A Protein LRIM1, AGAP0063 98.4 1.7E-07 5.9E-12 88.8 4.8 76 1-79 151-227 (317)
363 1ziw_A TOLL-like receptor 3; i 98.4 6.5E-07 2.2E-11 94.2 8.7 73 2-75 57-131 (680)
364 3tdw_A Gentamicin resistance p 98.4 1.8E-06 6.1E-11 81.3 10.8 137 164-319 24-224 (306)
365 1ziw_A TOLL-like receptor 3; i 98.3 3.1E-07 1.1E-11 96.7 5.8 66 14-79 556-623 (680)
366 3o53_A Protein LRIM1, AGAP0063 98.3 3.3E-07 1.1E-11 86.8 5.4 73 2-75 128-201 (317)
367 4glp_A Monocyte differentiatio 98.3 1.6E-07 5.5E-12 88.7 3.1 76 1-76 98-180 (310)
368 1xeu_A Internalin C; cellular 98.3 6.4E-07 2.2E-11 82.3 6.9 68 2-75 49-116 (263)
369 1xeu_A Internalin C; cellular 98.3 4.1E-07 1.4E-11 83.7 5.5 69 1-75 92-160 (263)
370 1ds9_A Outer arm dynein; leuci 98.3 1.2E-08 4E-13 89.8 -4.9 74 1-79 55-128 (198)
371 2xwt_C Thyrotropin receptor; s 98.3 2E-07 6.9E-12 84.4 3.2 79 1-80 38-119 (239)
372 4fmz_A Internalin; leucine ric 98.3 4.5E-07 1.5E-11 87.0 5.7 76 1-81 250-326 (347)
373 2xwt_C Thyrotropin receptor; s 98.3 2.4E-07 8.3E-12 83.9 3.3 79 1-80 62-145 (239)
374 1m9s_A Internalin B; cell inva 98.3 7.3E-07 2.5E-11 91.9 6.6 74 1-80 116-189 (605)
375 1h6t_A Internalin B; cell adhe 98.3 1.1E-06 3.6E-11 82.2 6.8 74 1-80 53-126 (291)
376 1m9s_A Internalin B; cell inva 98.3 1.3E-06 4.6E-11 89.9 7.9 70 1-75 72-141 (605)
377 1h6u_A Internalin H; cell adhe 98.2 1.2E-06 4.2E-11 82.4 6.9 74 1-80 114-187 (308)
378 1h6u_A Internalin H; cell adhe 98.2 1.5E-06 5.1E-11 81.9 7.1 74 1-80 48-121 (308)
379 3ovc_A Hygromycin-B 4-O-kinase 98.2 4.7E-06 1.6E-10 80.3 10.4 147 162-321 44-245 (362)
380 3rw6_A Nuclear RNA export fact 98.2 8.4E-07 2.9E-11 80.9 4.6 68 1-70 177-256 (267)
381 1h6t_A Internalin B; cell adhe 98.2 1.6E-06 5.3E-11 81.0 6.4 75 1-81 97-171 (291)
382 3cvr_A Invasion plasmid antige 98.1 1E-06 3.5E-11 89.9 4.0 67 1-79 147-220 (571)
383 3cvr_A Invasion plasmid antige 98.1 2.8E-06 9.5E-11 86.7 6.9 49 1-56 66-114 (571)
384 1jl5_A Outer protein YOPM; leu 98.1 3E-06 1E-10 84.4 6.6 53 18-75 131-183 (454)
385 1o6v_A Internalin A; bacterial 98.1 3.2E-06 1.1E-10 84.6 6.5 76 1-82 294-369 (466)
386 1jl5_A Outer protein YOPM; leu 98.1 1.9E-07 6.6E-12 93.1 -2.8 75 1-80 18-105 (454)
387 3bz5_A Internalin-J, INLJ; leu 98.1 4.3E-06 1.5E-10 83.3 7.0 72 1-80 49-120 (457)
388 1o6v_A Internalin A; bacterial 98.1 3.7E-06 1.3E-10 84.2 6.4 75 1-81 272-346 (466)
389 2ast_B S-phase kinase-associat 98.1 6.9E-07 2.3E-11 85.3 0.9 79 1-80 77-157 (336)
390 3ats_A Putative uncharacterize 98.1 8.3E-06 2.8E-10 78.5 8.6 85 165-251 26-121 (357)
391 3goz_A Leucine-rich repeat-con 98.0 1.6E-06 5.4E-11 83.8 3.1 79 1-80 5-94 (362)
392 2ca6_A RAN GTPase-activating p 98.0 1.1E-06 3.6E-11 85.8 1.8 79 1-80 194-288 (386)
393 2ast_B S-phase kinase-associat 98.0 1.5E-06 5.1E-11 82.9 2.3 75 1-80 54-132 (336)
394 3bz5_A Internalin-J, INLJ; leu 98.0 5.1E-06 1.7E-10 82.8 6.0 67 1-75 198-274 (457)
395 4fmz_A Internalin; leucine ric 98.0 8.1E-06 2.8E-10 78.1 7.2 70 1-75 51-120 (347)
396 3g06_A SSPH2 (leucine-rich rep 98.0 7.1E-06 2.4E-10 84.7 6.5 54 18-79 221-274 (622)
397 2olc_A MTR kinase, methylthior 97.9 4.3E-05 1.5E-09 74.6 11.2 76 164-248 35-120 (397)
398 2ca6_A RAN GTPase-activating p 97.9 2.2E-06 7.6E-11 83.5 2.0 79 1-80 166-258 (386)
399 4ay9_X Follicle-stimulating ho 97.9 4.2E-06 1.4E-10 80.3 3.7 55 2-60 17-72 (350)
400 3goz_A Leucine-rich repeat-con 97.9 5.4E-06 1.8E-10 80.0 3.2 79 1-80 29-123 (362)
401 2q83_A YTAA protein; 2635576, 97.9 0.00013 4.4E-09 69.5 12.7 32 288-319 221-252 (346)
402 3g06_A SSPH2 (leucine-rich rep 97.7 2.5E-05 8.5E-10 80.6 5.9 65 1-75 47-111 (622)
403 4ay9_X Follicle-stimulating ho 97.6 2.9E-05 9.8E-10 74.5 4.1 72 1-75 161-233 (350)
404 3jr1_A Putative fructosamine-3 97.5 0.00053 1.8E-08 64.2 10.8 140 163-315 40-232 (312)
405 1z7x_W Ribonuclease inhibitor; 97.5 1.9E-05 6.5E-10 78.7 0.6 75 1-75 291-380 (461)
406 3f7w_A Putative fructosamine-3 97.4 0.00048 1.6E-08 63.8 9.3 77 161-249 17-96 (288)
407 2pyw_A Uncharacterized protein 97.4 0.00073 2.5E-08 66.4 10.6 80 288-374 231-313 (420)
408 3un9_A NLR family member X1; l 97.3 5.7E-05 1.9E-09 72.9 1.2 75 1-75 133-221 (372)
409 3dxq_A Choline/ethanolamine ki 97.3 0.00075 2.6E-08 62.9 8.8 32 288-320 172-203 (301)
410 3rfe_A Platelet glycoprotein I 97.2 0.00036 1.2E-08 56.1 5.2 58 21-80 11-70 (130)
411 2yle_A Protein spire homolog 1 97.2 0.0018 6E-08 56.1 9.4 100 248-373 33-132 (229)
412 2ppq_A HSK, HK, homoserine kin 97.1 0.0078 2.7E-07 56.5 13.9 149 165-319 28-217 (322)
413 1z7x_W Ribonuclease inhibitor; 97.1 0.00015 5E-09 72.2 1.9 78 1-79 177-269 (461)
414 3rfe_A Platelet glycoprotein I 97.0 0.00067 2.3E-08 54.5 4.4 51 2-55 16-68 (130)
415 3un9_A NLR family member X1; l 96.9 0.00022 7.7E-09 68.7 1.6 76 1-76 108-194 (372)
416 3csv_A Aminoglycoside phosphot 96.9 0.01 3.5E-07 56.0 13.0 33 288-320 182-218 (333)
417 1nw1_A Choline kinase (49.2 KD 96.8 0.003 1E-07 62.0 8.9 75 164-249 78-158 (429)
418 2qg7_A Ethanolamine kinase PV0 96.8 0.0074 2.5E-07 59.6 11.4 75 164-250 113-188 (458)
419 1zyl_A Hypothetical protein YI 96.7 0.0079 2.7E-07 56.6 10.5 147 165-319 32-223 (328)
420 3feg_A Choline/ethanolamine ki 96.6 0.012 4.2E-07 56.5 11.1 145 165-319 56-254 (379)
421 3ogk_B Coronatine-insensitive 96.6 0.00032 1.1E-08 72.1 -0.2 67 10-76 428-499 (592)
422 1io0_A Tropomodulin; LRR prote 96.4 0.00079 2.7E-08 57.8 1.3 75 1-75 43-133 (185)
423 3ogk_B Coronatine-insensitive 96.4 0.00055 1.9E-08 70.4 0.3 41 15-55 161-205 (592)
424 1io0_A Tropomodulin; LRR prote 96.4 0.00096 3.3E-08 57.3 1.6 66 10-75 28-103 (185)
425 2p1m_B Transport inhibitor res 96.2 0.0006 2.1E-08 70.1 -0.6 66 10-76 424-492 (594)
426 3c5i_A Choline kinase; choline 96.2 0.006 2.1E-07 58.6 6.2 75 165-249 39-120 (369)
427 3f2s_A CK, chetk-alpha, cholin 96.2 0.018 6.3E-07 55.5 9.5 32 288-319 243-280 (401)
428 3i1a_A Spectinomycin phosphotr 96.1 0.057 2E-06 51.0 12.5 33 288-320 205-237 (339)
429 2p1m_B Transport inhibitor res 95.7 0.0024 8.2E-08 65.6 0.9 53 4-56 115-170 (594)
430 3sb4_A Hypothetical leucine ri 95.5 0.015 5E-07 54.8 5.5 57 17-75 225-284 (329)
431 2ra8_A Uncharacterized protein 95.1 0.0028 9.5E-08 60.6 -1.0 61 15-75 249-317 (362)
432 2ra8_A Uncharacterized protein 94.7 0.006 2E-07 58.3 0.2 64 16-80 217-293 (362)
433 3mes_A Choline kinase; malaria 94.6 0.11 3.9E-06 50.4 9.1 144 165-319 76-291 (424)
434 3g15_A CK, chetk-alpha, cholin 93.3 0.14 4.6E-06 49.6 6.8 29 291-319 246-280 (401)
435 3sb4_A Hypothetical leucine ri 93.1 0.083 2.8E-06 49.6 4.8 71 1-75 233-307 (329)
436 3e4g_A ATP synthase subunit S, 92.4 0.028 9.5E-07 47.3 0.4 73 9-81 52-130 (176)
437 4fdw_A Leucine rich hypothetic 88.9 0.51 1.8E-05 45.5 5.8 60 13-75 153-213 (401)
438 2ks1_B Epidermal growth factor 84.8 0.17 5.9E-06 31.1 -0.1 28 104-132 12-39 (44)
439 4fdw_A Leucine rich hypothetic 84.4 1 3.6E-05 43.3 5.2 36 18-55 248-284 (401)
440 3e4g_A ATP synthase subunit S, 81.9 0.75 2.6E-05 38.5 2.6 63 14-76 81-150 (176)
441 2l2t_A Receptor tyrosine-prote 80.9 0.28 9.6E-06 30.1 -0.2 26 105-131 12-37 (44)
442 4ano_A ESSB; membrane protein, 79.5 3 0.0001 36.1 5.7 103 235-379 60-164 (219)
443 4ann_A ESSB; membrane protein, 77.7 3.2 0.00011 35.7 5.3 87 263-383 77-163 (215)
444 1pgv_A TMD-1, tropomodulin TMD 76.4 1.2 4.1E-05 38.0 2.2 61 15-75 38-108 (197)
445 1pgv_A TMD-1, tropomodulin TMD 74.5 1.2 4.2E-05 37.9 1.8 65 11-75 63-136 (197)
446 3cxl_A N-chimerin; SH2, RHO-GA 73.2 0.49 1.7E-05 46.6 -1.1 62 162-228 145-214 (463)
447 2k1k_A Ephrin type-A receptor 72.5 0.41 1.4E-05 28.5 -1.1 26 104-129 11-36 (38)
448 4h09_A Hypothetical leucine ri 61.0 13 0.00044 35.0 6.2 61 13-75 258-320 (379)
449 4fs7_A Uncharacterized protein 59.3 8.6 0.00029 36.6 4.6 60 13-75 292-353 (394)
450 4gt6_A Cell surface protein; l 58.4 14 0.00048 35.0 5.9 60 13-75 283-344 (394)
451 2jwa_A Receptor tyrosine-prote 47.1 2.3 7.8E-05 26.1 -1.1 9 106-114 14-22 (44)
452 4fs7_A Uncharacterized protein 39.1 24 0.00083 33.3 4.2 64 9-75 310-376 (394)
453 4gt6_A Cell surface protein; l 37.1 25 0.00087 33.2 3.9 69 4-76 297-368 (394)
454 4h09_A Hypothetical leucine ri 34.6 51 0.0017 30.7 5.6 61 12-75 234-296 (379)
455 2k9y_A Ephrin type-A receptor 31.8 7.3 0.00025 23.3 -0.6 9 107-115 17-25 (41)
456 3ls8_A Phosphatidylinositol 3- 27.5 1.2E+02 0.004 30.6 6.9 47 265-318 453-501 (614)
457 2x6h_A GH13170P, VPS34, phosph 21.6 52 0.0018 33.8 3.1 45 267-318 529-575 (696)
458 1cja_A Protein (actin-fragmin 21.6 3.1E+02 0.011 25.2 7.9 142 163-319 73-237 (342)
459 3hhm_A Phosphatidylinositol-4, 20.0 1.6E+02 0.0056 31.9 6.6 60 249-318 899-961 (1091)
No 1
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=2.3e-58 Score=434.70 Aligned_cols=265 Identities=26% Similarity=0.420 Sum_probs=211.9
Q ss_pred CCCCccCccccccceeEEEEEEcC---CCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDH---DDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~---~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
++|.+.+.||+|+||+||+|++.. ..++..||||+++.......++|.+|+++|++++|||||+++|+|.. +
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~-----~ 87 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVE-----G 87 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-----S
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEee-----C
Confidence 467888999999999999998753 23578899999987655566789999999999999999999999743 4
Q ss_pred ceeeEEeecccCCCHHHHHhhcC---------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNR---------DAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGE 306 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~---------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~ 306 (484)
+..++|||||++|+|.++++... .....++|.+++.|+.||+.||+||| +++|+||||||+|||++++
T Consensus 88 ~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDlKp~NILl~~~ 164 (299)
T 4asz_A 88 DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGEN 164 (299)
T ss_dssp SSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGG
T ss_pred CEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCccCHhhEEECCC
Confidence 47899999999999999997542 23456999999999999999999999 8999999999999999999
Q ss_pred CceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCc
Q 011508 307 LTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNL 385 (484)
Q Consensus 307 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~ 385 (484)
+.+||+|||+|+....... ........||+.|+|||++.+..|+.++|||||||++|||+| |+.||.+....
T Consensus 165 ~~~Ki~DFGla~~~~~~~~-----~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~-- 237 (299)
T 4asz_A 165 LLVKIGDFGMSRDVYSTDY-----YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN-- 237 (299)
T ss_dssp GCEEECCCSCHHHHTGGGC-----EEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--
T ss_pred CcEEECCcccceecCCCCc-----eeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH--
Confidence 9999999999986643321 112223468999999999999999999999999999999999 99999764211
Q ss_pred cHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHH
Q 011508 386 TLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLS 465 (484)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 465 (484)
+...... .... ...+..|+.++.+|+.+||+.||++|||++||++.|+.
T Consensus 238 ---~~~~~i~--------~~~~--------------------~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~ 286 (299)
T 4asz_A 238 ---EVIECIT--------QGRV--------------------LQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQN 286 (299)
T ss_dssp ---HHHHHHH--------HTCC--------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ---HHHHHHH--------cCCC--------------------CCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 1111100 0000 00134457789999999999999999999999999998
Q ss_pred HHHH
Q 011508 466 FRNK 469 (484)
Q Consensus 466 i~~~ 469 (484)
+.+.
T Consensus 287 ~~~~ 290 (299)
T 4asz_A 287 LAKA 290 (299)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 8654
No 2
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.7e-57 Score=434.56 Aligned_cols=265 Identities=27% Similarity=0.424 Sum_probs=206.3
Q ss_pred CCCCccCccccccceeEEEEEEcC---CCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDH---DDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~---~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
++|.+.+.||+|+||+||+|++.. ..+++.||||+++.......++|.+|+++|++++|||||+++|+|.. +
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~-----~ 115 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTE-----G 115 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-----S
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE-----C
Confidence 356778899999999999999753 34578999999986655556789999999999999999999999743 4
Q ss_pred ceeeEEeecccCCCHHHHHhhcCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeec
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRD-----------APRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLD 304 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~-----------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~ 304 (484)
...++|||||++|+|.++++.... ...+++|.+++.|+.||+.||+||| +++|+||||||+||||+
T Consensus 116 ~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLKp~NILl~ 192 (329)
T 4aoj_A 116 RPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA---GLHFVHRDLATRNCLVG 192 (329)
T ss_dssp SSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEE
T ss_pred CEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHhhEEEC
Confidence 478999999999999999985432 1246999999999999999999999 89999999999999999
Q ss_pred CCCceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccC
Q 011508 305 GELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTG 383 (484)
Q Consensus 305 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~ 383 (484)
+++.+||+|||+++....... ........||+.|+|||++.+..++.++|||||||++|||+| |+.||......
T Consensus 193 ~~~~~Ki~DFGla~~~~~~~~-----~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~ 267 (329)
T 4aoj_A 193 QGLVVKIGDFGMSRDIYSTDY-----YRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT 267 (329)
T ss_dssp TTTEEEECCCC---------------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH
T ss_pred CCCcEEEcccccceeccCCCc-----ceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHH
Confidence 999999999999987643221 112234569999999999999999999999999999999999 89999764211
Q ss_pred CccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHH
Q 011508 384 NLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQL 463 (484)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 463 (484)
.+...+... . .+ ..+..|+.++.+|+.+||+.||++|||++||++.|
T Consensus 268 --~~~~~i~~g--------~--~~---------------------~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L 314 (329)
T 4aoj_A 268 --EAIDCITQG--------R--EL---------------------ERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARL 314 (329)
T ss_dssp --HHHHHHHHT--------C--CC---------------------CCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHH
T ss_pred --HHHHHHHcC--------C--CC---------------------CCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHH
Confidence 111111100 0 00 01344577899999999999999999999999999
Q ss_pred HHHHHH
Q 011508 464 LSFRNK 469 (484)
Q Consensus 464 ~~i~~~ 469 (484)
+.+.+.
T Consensus 315 ~~l~~~ 320 (329)
T 4aoj_A 315 QALAQA 320 (329)
T ss_dssp HHHHHS
T ss_pred HHHhhC
Confidence 988653
No 3
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=8.1e-57 Score=424.00 Aligned_cols=264 Identities=29% Similarity=0.424 Sum_probs=204.2
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
.+++.+.+.||+|+||+||+|++. ..||||+++.... ...+.|.+|++++++++|||||+++++|. +
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~-----~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~------~ 103 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWH-----GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT------K 103 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESS-----SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC------S
T ss_pred HHHeEEeeEEeeCCCcEEEEEEEC-----CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE------C
Confidence 456788999999999999999854 2489999875432 33467999999999999999999999863 2
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
+..++|||||++|+|.++++.. ...+++.+++.|+.||+.||+||| +++||||||||+||||++++.+||+|||
T Consensus 104 ~~~~iVmEy~~gGsL~~~l~~~---~~~l~~~~~~~i~~qia~gL~yLH---~~~IiHRDlKp~NILl~~~~~~Ki~DFG 177 (307)
T 3omv_A 104 DNLAIVTQWCEGSSLYKHLHVQ---ETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFG 177 (307)
T ss_dssp SSCEEEEECCSSCBHHHHHHTS---CCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCSSSEEEETTEEEEECCCS
T ss_pred CeEEEEEEcCCCCCHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCccCHHHEEECCCCcEEEeecc
Confidence 3578999999999999999743 245999999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCC---CCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHH
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG---SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVK 392 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~---~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 392 (484)
+|+....... ........||+.|+|||++.+ ..|+.++|||||||++|||+||+.||.+..... .+...+.
T Consensus 178 la~~~~~~~~-----~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~-~~~~~~~ 251 (307)
T 3omv_A 178 LATVKSRWSG-----SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD-QIIFMVG 251 (307)
T ss_dssp SCBC-----------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH-HHHHHHH
T ss_pred CceecccCCc-----ceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHH-HHHHHHh
Confidence 9987643221 112234579999999999853 468999999999999999999999997532211 1111111
Q ss_pred hhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHHHHh
Q 011508 393 EALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRNKLV 471 (484)
Q Consensus 393 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~~ 471 (484)
. ....+.+. ..+.+|+.++.+|+.+||+.||++||||.||++.|+.++..+.
T Consensus 252 ~-------~~~~p~~~--------------------~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~lp 303 (307)
T 3omv_A 252 R-------GYASPDLS--------------------KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP 303 (307)
T ss_dssp T-------TCCCCCST--------------------TSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred c-------CCCCCCcc--------------------cccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccCC
Confidence 1 00111110 0123457789999999999999999999999999998876543
No 4
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=4.3e-57 Score=427.78 Aligned_cols=261 Identities=23% Similarity=0.378 Sum_probs=207.1
Q ss_pred CCCccCccccccceeEEEEEEcC---CCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDH---DDHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~---~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
.+++.+.||+|+||+||+|++.. ..+++.||||+++.... ...++|.+|+.++++++|||||+++|+|.. +
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-----~ 101 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTK-----D 101 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-----S
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEE-----C
Confidence 35667899999999999999742 33567899999975443 334789999999999999999999999743 4
Q ss_pred ceeeEEeecccCCCHHHHHhhcCC------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeee
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRD------------APRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLL 303 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll 303 (484)
+..++|||||++|+|.++|..... ....++|.+++.|+.||++||+||| +++||||||||+||||
T Consensus 102 ~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLK~~NILl 178 (308)
T 4gt4_A 102 QPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLV 178 (308)
T ss_dssp SSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEE
T ss_pred CEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCccccceEE
Confidence 478999999999999999975321 1235899999999999999999999 8999999999999999
Q ss_pred cCCCceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCcc
Q 011508 304 DGELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFT 382 (484)
Q Consensus 304 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~ 382 (484)
++++.+||+|||+++....... ........||+.|+|||++.+..++.++|||||||++|||+| |+.||.+...
T Consensus 179 ~~~~~~Ki~DFGlar~~~~~~~-----~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~ 253 (308)
T 4gt4_A 179 YDKLNVKISDLGLFREVYAADY-----YKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN 253 (308)
T ss_dssp CGGGCEEECCSCCBCGGGGGGC-----BCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH
T ss_pred CCCCCEEECCcccceeccCCCc-----eeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH
Confidence 9999999999999987643321 112234569999999999999999999999999999999999 8999976421
Q ss_pred CCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 383 GNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
. .+...+. +.... ..+.+|+.++.+|+.+||+.||++||||.||++.
T Consensus 254 ~--~~~~~i~-----------~~~~~--------------------~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~ 300 (308)
T 4gt4_A 254 Q--DVVEMIR-----------NRQVL--------------------PCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSR 300 (308)
T ss_dssp H--HHHHHHH-----------TTCCC--------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred H--HHHHHHH-----------cCCCC--------------------CCcccchHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 1 1111111 00000 0134567789999999999999999999999999
Q ss_pred HHHH
Q 011508 463 LLSF 466 (484)
Q Consensus 463 L~~i 466 (484)
|+.+
T Consensus 301 L~a~ 304 (308)
T 4gt4_A 301 LRAW 304 (308)
T ss_dssp HHTS
T ss_pred HHhc
Confidence 9754
No 5
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=2.1e-55 Score=419.43 Aligned_cols=250 Identities=24% Similarity=0.311 Sum_probs=205.7
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCcee
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFE 238 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 238 (484)
+.|++.+.||+|+||+||+|+. ..+++.||||+++.......+.+.+|+++|++++|||||++++++. .++..
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~--~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~-----~~~~~ 146 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATV--RSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL-----VGDEL 146 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEE--TTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEE-----ETTEE
T ss_pred HhcEEeEEeecCcCeEEEEEEE--CCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEE-----ECCEE
Confidence 4689999999999999999994 4467899999998766666677899999999999999999999954 44589
Q ss_pred eEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccc
Q 011508 239 ALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAK 318 (484)
Q Consensus 239 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~ 318 (484)
|+|||||++|+|.+++... .+++.++..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+|+
T Consensus 147 ~ivmEy~~gg~L~~~l~~~-----~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~ 218 (346)
T 4fih_A 147 WVVMEFLEGGALTDIVTHT-----RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCA 218 (346)
T ss_dssp EEEECCCTTEEHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEeCCCCCcHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEECCCCCEEEecCcCce
Confidence 9999999999999999742 4899999999999999999999 8999999999999999999999999999998
Q ss_pred ccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchh
Q 011508 319 FLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPER 398 (484)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 398 (484)
.+.... ......+||+.|+|||++.+..|+.++||||+||++|||++|+.||.+... ......+..
T Consensus 219 ~~~~~~-------~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~--~~~~~~i~~----- 284 (346)
T 4fih_A 219 QVSKEV-------PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--LKAMKMIRD----- 284 (346)
T ss_dssp ECCSSS-------CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHHHHH-----
T ss_pred ecCCCC-------CcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--HHHHHHHHc-----
Confidence 764322 223346799999999999999999999999999999999999999975311 111111111
Q ss_pred hhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 399 LAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 399 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
...+.+.. +..++.++.+|+.+||+.||++|||++|+++
T Consensus 285 ---~~~~~~~~---------------------~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 285 ---NLPPRLKN---------------------LHKVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp ---SSCCCCSC---------------------GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ---CCCCCCCc---------------------cccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11111100 2233567899999999999999999999876
No 6
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=2.4e-55 Score=423.01 Aligned_cols=274 Identities=23% Similarity=0.319 Sum_probs=217.3
Q ss_pred HhHHHhcCCCCccCccccccceeEEEEEEcCC---CCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCC-CCceeEeee
Q 011508 152 QNLFKATDGFSLENLIGAGSFGSVYKGIFDHD---DHETLVAVKVLNLQHR-GASKSFIAECQALRSIRH-RNLVKIITS 226 (484)
Q Consensus 152 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~---~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h-~niv~~~~~ 226 (484)
.+++...++|++.+.||+|+||+||+|++... ...+.||||+++.... ...+.|.+|+++|.+++| ||||+++|+
T Consensus 57 ~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~ 136 (353)
T 4ase_A 57 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA 136 (353)
T ss_dssp HHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred cccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEE
Confidence 34445567899999999999999999987543 3457899999976543 234679999999999965 899999999
Q ss_pred eeeeccCCCceeeEEeecccCCCHHHHHhhcCC------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeec
Q 011508 227 CVSVDFQGNDFEALVYELMVNGSLEEWLHLNRD------------APRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHC 294 (484)
Q Consensus 227 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~ 294 (484)
|. ..+...++|||||++|+|.++|+.... ....+++.+++.++.||+.||+||| +++||||
T Consensus 137 ~~----~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH---~~~iiHR 209 (353)
T 4ase_A 137 CT----KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHR 209 (353)
T ss_dssp EC----CTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCS
T ss_pred EE----ecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHh---hCCeecC
Confidence 74 334568999999999999999975432 1345899999999999999999999 8999999
Q ss_pred CCCCCCeeecCCCceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-C
Q 011508 295 DLKPSNVLLDGELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-G 373 (484)
Q Consensus 295 dlk~~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g 373 (484)
||||+|||+++++.+||+|||+|+.+..... ........||+.|+|||++.+..|+.++|||||||++|||+| |
T Consensus 210 DLK~~NILl~~~~~vKi~DFGlar~~~~~~~-----~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G 284 (353)
T 4ase_A 210 DLAARNILLSEKNVVKICDFGLARDIYKDPD-----YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG 284 (353)
T ss_dssp CCSGGGEEECGGGCEEECCCGGGSCTTTCTT-----SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTS
T ss_pred ccCccceeeCCCCCEEECcchhhhhcccCCC-----ceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCC
Confidence 9999999999999999999999987643321 122234568999999999999999999999999999999998 9
Q ss_pred CCCCCCCccCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCC
Q 011508 374 KGPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRER 453 (484)
Q Consensus 374 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R 453 (484)
+.||.+..... .+...+.... . + ..+..|+.++.+++..||+.||++|
T Consensus 285 ~~Pf~~~~~~~-~~~~~i~~g~--------~--~---------------------~~p~~~~~~~~~li~~c~~~dP~~R 332 (353)
T 4ase_A 285 ASPYPGVKIDE-EFCRRLKEGT--------R--M---------------------RAPDYTTPEMYQTMLDCWHGEPSQR 332 (353)
T ss_dssp CCSSTTCCCSH-HHHHHHHHTC--------C--C---------------------CCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred CCCCCCCCHHH-HHHHHHHcCC--------C--C---------------------CCCccCCHHHHHHHHHHcCcChhHC
Confidence 99997643221 1111111100 0 0 0133446788999999999999999
Q ss_pred CCHHHHHHHHHHHHHH
Q 011508 454 MNMEEVAAQLLSFRNK 469 (484)
Q Consensus 454 Pt~~evl~~L~~i~~~ 469 (484)
||+.||++.|+.+.+.
T Consensus 333 Pt~~eil~~L~~llq~ 348 (353)
T 4ase_A 333 PTFSELVEHLGNLLQA 348 (353)
T ss_dssp CCHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHH
Confidence 9999999999988654
No 7
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=6.4e-55 Score=414.00 Aligned_cols=283 Identities=23% Similarity=0.252 Sum_probs=202.7
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCcee
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFE 238 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 238 (484)
.+|.+.+.||+|+||+||+|++. ++.||||+++.... ....+..|+..+.+++|||||+++++|...+ ......
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~~----g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~-~~~~~~ 76 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKWR----GEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDN-GTWTQL 76 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEET----TEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC-SSSEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEEC----CEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecC-CCceEE
Confidence 35778899999999999999864 67899999975422 1223345666677889999999999986543 223467
Q ss_pred eEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-----CCCCeeecCCCCCCeeecCCCceEEcc
Q 011508 239 ALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHY-----CETPIVHCDLKPSNVLLDGELTAHVSD 313 (484)
Q Consensus 239 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-----~~~~ivH~dlk~~NIll~~~~~~kl~D 313 (484)
++|||||++|+|.++++.. .++|..+++++.|++.||+|||+. +..+|+||||||+|||++.++.+||+|
T Consensus 77 ~lV~Ey~~~gsL~~~l~~~-----~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~D 151 (303)
T 3hmm_A 77 WLVSDYHEHGSLFDYLNRY-----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 151 (303)
T ss_dssp EEEEECCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECC
T ss_pred EEEecCCCCCcHHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEe
Confidence 9999999999999999743 489999999999999999999932 123999999999999999999999999
Q ss_pred cCcccccccccccCCCCccccccccccccccCccccCCC------CCCcccceehhhHHHHHHHhCCCCCCCCccCCccH
Q 011508 314 FGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGS------EVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTL 387 (484)
Q Consensus 314 fg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~------~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~ 387 (484)
||+|+......... ........||+.|+|||++.+. .++.++|||||||++|||+||+.||..........
T Consensus 152 FGla~~~~~~~~~~---~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~ 228 (303)
T 3hmm_A 152 LGLAVRHDSATDTI---DIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPY 228 (303)
T ss_dssp CTTCEEEETTTTEE---SCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTT
T ss_pred CCCCccccCCCCce---eeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccc
Confidence 99998764332111 1122345799999999998754 47789999999999999999998875433222111
Q ss_pred hHHHHhhc-chh-hhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHH
Q 011508 388 HNFVKEAL-PER-LAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLS 465 (484)
Q Consensus 388 ~~~~~~~~-~~~-~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 465 (484)
..+..... .+. ...+.+..+..... ......+++..+.+|+.+||+.||++||||.||++.|++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~rp~~p--------------~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~ 294 (303)
T 3hmm_A 229 YDLVPSDPSVEEMRKVVCEQKLRPNIP--------------NRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ 294 (303)
T ss_dssp TTTSCSSCCHHHHHHHHTTSCCCCCCC--------------GGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHH
T ss_pred hhcccccchHHHHHHHHhcccCCCCCC--------------ccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHH
Confidence 11110000 000 11111111111000 001123457789999999999999999999999999999
Q ss_pred HHHH
Q 011508 466 FRNK 469 (484)
Q Consensus 466 i~~~ 469 (484)
+.++
T Consensus 295 l~~~ 298 (303)
T 3hmm_A 295 LSQQ 298 (303)
T ss_dssp HHHC
T ss_pred HHHH
Confidence 8754
No 8
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=6.6e-55 Score=414.81 Aligned_cols=260 Identities=24% Similarity=0.261 Sum_probs=206.0
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCcee
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFE 238 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 238 (484)
+.|.+.++||+|+||.||+|+. ..+++.||||+++.... ..+|+.++++++|||||++++++. +++..
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~--~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~-----~~~~~ 125 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKD--KQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVR-----EGPWV 125 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEE--TTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEE-----ETTEE
T ss_pred hheEeCcEeccCCCeEEEEEEE--CCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEE-----ECCEE
Confidence 4577888999999999999994 44678999999975432 247999999999999999999854 45588
Q ss_pred eEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCC-ceEEcccCcc
Q 011508 239 ALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGEL-TAHVSDFGLA 317 (484)
Q Consensus 239 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~-~~kl~Dfg~a 317 (484)
++|||||+||+|.++++... .+++.++..++.||+.||+||| +++|+||||||+||||+.++ .+||+|||+|
T Consensus 126 ~ivmEy~~gg~L~~~l~~~~----~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~~vKl~DFGla 198 (336)
T 4g3f_A 126 NIFMELLEGGSLGQLIKQMG----CLPEDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHA 198 (336)
T ss_dssp EEEECCCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCCGGGEEECTTSCCEEECCCTTC
T ss_pred EEEEeccCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEeCCCCEEEEeeCCCC
Confidence 99999999999999998543 5999999999999999999999 99999999999999999987 6999999999
Q ss_pred cccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcch
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPE 397 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 397 (484)
+.+...... .........+||+.|||||++.+..|+.++|||||||++|||+||+.||........ +........+
T Consensus 199 ~~~~~~~~~--~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~-~~~i~~~~~~- 274 (336)
T 4g3f_A 199 LCLQPDGLG--KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPL-CLKIASEPPP- 274 (336)
T ss_dssp EEC--------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCC-HHHHHHSCCG-
T ss_pred eEccCCCcc--cceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH-HHHHHcCCCC-
Confidence 877543211 111112335799999999999999999999999999999999999999976433221 1111111000
Q ss_pred hhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHHHH
Q 011508 398 RLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRNKL 470 (484)
Q Consensus 398 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~ 470 (484)
..+ .+..++..+.+++.+||+.||++|||+.|+++.|.......
T Consensus 275 -~~~----------------------------~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~ 318 (336)
T 4g3f_A 275 -IRE----------------------------IPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEV 318 (336)
T ss_dssp -GGG----------------------------SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred -chh----------------------------cCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhh
Confidence 000 02334667899999999999999999999999998877654
No 9
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=2.7e-55 Score=419.31 Aligned_cols=251 Identities=21% Similarity=0.288 Sum_probs=198.9
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCc
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
++|++.+.||+|+||+||+|+. ..+++.||||+++.... ...+.+.+|+++|++++|||||++++++. +++
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~--~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~-----~~~ 96 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKS--TEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFE-----ENG 96 (350)
T ss_dssp CCEEEEEEC------CEEEEEE--TTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-----ETT
T ss_pred cceEEeEEEecCCCeEEEEEEE--CCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEE-----ECC
Confidence 6899999999999999999994 44678999999976532 23467899999999999999999999853 455
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCc
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGL 316 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 316 (484)
..|+|||||+||+|.+++.... ...+++.+++.|+.||+.||+||| +++|+||||||+||||+.++.+||+|||+
T Consensus 97 ~~yiVmEy~~gg~L~~~i~~~~--~~~~~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGl 171 (350)
T 4b9d_A 97 SLYIVMDYCEGGDLFKRINAQK--GVLFQEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGI 171 (350)
T ss_dssp EEEEEEECCTTCBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHH---HTTCEETTCCGGGEEECTTCCEEECSTTE
T ss_pred EEEEEEeCCCCCcHHHHHHHcC--CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCCEEEccccc
Confidence 8999999999999999997543 345789999999999999999999 89999999999999999999999999999
Q ss_pred ccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcc
Q 011508 317 AKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALP 396 (484)
Q Consensus 317 a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 396 (484)
|+.+.... ......+||+.|+|||++.+..|+.++|||||||++|||+||+.||.... ..+.......
T Consensus 172 a~~~~~~~-------~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~-----~~~~~~~i~~ 239 (350)
T 4b9d_A 172 ARVLNSTV-------ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS-----MKNLVLKIIS 239 (350)
T ss_dssp ESCCCHHH-------HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHH
T ss_pred ceeecCCc-------ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC-----HHHHHHHHHc
Confidence 98764321 12234579999999999999999999999999999999999999997532 1111111111
Q ss_pred hhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 397 ERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 397 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
... .+ + +..++.++.+|+.+||+.||++|||++|+++
T Consensus 240 ~~~----~~-~-----------------------~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 240 GSF----PP-V-----------------------SLHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp TCC----CC-C-----------------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCC----CC-C-----------------------CccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 000 00 0 1223567899999999999999999999986
No 10
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1.6e-54 Score=405.37 Aligned_cols=249 Identities=29% Similarity=0.399 Sum_probs=195.6
Q ss_pred CccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCceee
Q 011508 162 SLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFEA 239 (484)
Q Consensus 162 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 239 (484)
.+.+.||+|+||+||+|+.. .++..||+|++..... ...+.|.+|+++|++++|||||++++++.... .++...+
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~--~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~-~~~~~~~ 105 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDT--ETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTV-KGKKCIV 105 (290)
T ss_dssp EEEEEEEECSSEEEEEEEET--TTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEE-TTEEEEE
T ss_pred EeeeEEecCcCcEEEEEEEC--CCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeecc-CCCcEEE
Confidence 56678999999999999954 4678999999975432 23467899999999999999999999875432 3345789
Q ss_pred EEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eeecCCCCCCeeecC-CCceEEcccCc
Q 011508 240 LVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETP--IVHCDLKPSNVLLDG-ELTAHVSDFGL 316 (484)
Q Consensus 240 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~dlk~~NIll~~-~~~~kl~Dfg~ 316 (484)
+|||||++|+|.+++... ..+++..+..++.||+.||+||| +++ |+||||||+|||++. ++.+||+|||+
T Consensus 106 lvmEy~~gg~L~~~l~~~----~~l~~~~~~~~~~qi~~aL~ylH---~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGl 178 (290)
T 3fpq_A 106 LVTELMTSGTLKTYLKRF----KVMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGL 178 (290)
T ss_dssp EEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCCCCCGGGEEESSTTSCEEECCTTG
T ss_pred EEEeCCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCCCEEecccChhheeEECCCCCEEEEeCcC
Confidence 999999999999999854 35899999999999999999999 777 999999999999974 78999999999
Q ss_pred ccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcc
Q 011508 317 AKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALP 396 (484)
Q Consensus 317 a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 396 (484)
|+.... ......+||+.|+|||++.+ .|+.++|||||||++|||+||+.||.+.... .........
T Consensus 179 a~~~~~---------~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~----~~~~~~i~~ 244 (290)
T 3fpq_A 179 ATLKRA---------SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNA----AQIYRRVTS 244 (290)
T ss_dssp GGGCCT---------TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH----HHHHHHHTT
T ss_pred CEeCCC---------CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcH----HHHHHHHHc
Confidence 975422 12234579999999998865 6999999999999999999999999653211 111111000
Q ss_pred hhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 397 ERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 397 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
. ..+.. .+..++.++.+|+.+||+.||++|||++|+++
T Consensus 245 ~-----~~~~~----------------------~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 245 G-----VKPAS----------------------FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp T-----CCCGG----------------------GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred C-----CCCCC----------------------CCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0 00000 01112456889999999999999999999975
No 11
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=4.6e-55 Score=410.90 Aligned_cols=250 Identities=21% Similarity=0.323 Sum_probs=204.3
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
++|++.+.||+|+||+||+|+ +..+++.||||+++... ....+.+.+|+++|++++|||||++++++ +++
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~--~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~-----~~~ 104 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLAR--ELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTF-----QDD 104 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEE--ETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEE-----ECS
T ss_pred cccEEEEEEecccCeEEEEEE--ECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE-----EeC
Confidence 569999999999999999999 44568899999997532 33457799999999999999999999984 556
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
+..++|||||+||+|.+++.... .+++.++..++.||+.||+||| +++|+||||||+|||++.++.+||+|||
T Consensus 105 ~~~yivmEy~~gG~L~~~i~~~~----~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDlKPeNILl~~~g~vKl~DFG 177 (311)
T 4aw0_A 105 EKLYFGLSYAKNGELLKYIRKIG----SFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 177 (311)
T ss_dssp SEEEEEECCCTTEEHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCT
T ss_pred CEEEEEEecCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEEcCCCCEEEEEcC
Confidence 68999999999999999998543 5999999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhc
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEAL 395 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 395 (484)
+|+.+.... ........+||+.|+|||++.+..|+.++||||+||++|||+||+.||..... .......
T Consensus 178 la~~~~~~~-----~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~-----~~~~~~i- 246 (311)
T 4aw0_A 178 TAKVLSPES-----KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE-----GLIFAKI- 246 (311)
T ss_dssp TCEECCTTT-----TCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHH-
T ss_pred CceecCCCC-----CcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHH-
Confidence 999774322 11223346899999999999999999999999999999999999999975311 1111111
Q ss_pred chhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 396 PERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 396 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
....... +..++.++.+|+.+||+.||++|||++|++.
T Consensus 247 -------~~~~~~~---------------------p~~~s~~~~dli~~lL~~dp~~R~t~~e~~~ 284 (311)
T 4aw0_A 247 -------IKLEYDF---------------------PEKFFPKARDLVEKLLVLDATKRLGCEEMEG 284 (311)
T ss_dssp -------HHTCCCC---------------------CTTCCHHHHHHHHHHSCSSGGGSTTSGGGTC
T ss_pred -------HcCCCCC---------------------CcccCHHHHHHHHHHccCCHhHCcChHHHcC
Confidence 1000000 1122556889999999999999999999754
No 12
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=4.1e-54 Score=420.52 Aligned_cols=250 Identities=24% Similarity=0.311 Sum_probs=206.0
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCcee
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFE 238 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 238 (484)
+.|++.+.||+|+||.||+|+. ..+++.||||++........+.+.+|+.+|++++|||||++++++. .++..
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~--~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~-----~~~~~ 223 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATV--RSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL-----VGDEL 223 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEE--TTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEE-----ETTEE
T ss_pred HhcEeeeEeccCcCcEEEEEEE--CCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEE-----ECCEE
Confidence 5699999999999999999994 4467899999998776666678999999999999999999999964 34589
Q ss_pred eEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccc
Q 011508 239 ALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAK 318 (484)
Q Consensus 239 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~ 318 (484)
|+|||||+||+|.++++.. .+++.++..++.||+.||+||| +++|+||||||+||||+.++.+||+|||+|+
T Consensus 224 ~iVmEy~~gG~L~~~i~~~-----~l~e~~~~~~~~qil~aL~ylH---~~~IiHRDiKp~NILl~~~g~vKl~DFGla~ 295 (423)
T 4fie_A 224 WVVMEFLEGGALTDIVTHT-----RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCA 295 (423)
T ss_dssp EEEEECCTTEEHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSTTTEEECTTCCEEECCCTTCE
T ss_pred EEEEeCCCCCcHHHHHhcc-----CCCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEecCccce
Confidence 9999999999999999742 4899999999999999999999 8999999999999999999999999999998
Q ss_pred ccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchh
Q 011508 319 FLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPER 398 (484)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 398 (484)
.+.... ......+||+.|||||++.+..|+.++|||||||++|||++|+.||.+... ......+..
T Consensus 296 ~~~~~~-------~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~--~~~~~~i~~----- 361 (423)
T 4fie_A 296 QVSKEV-------PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--LKAMKMIRD----- 361 (423)
T ss_dssp ECCSSC-------CCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHHHHH-----
T ss_pred ECCCCC-------ccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--HHHHHHHHc-----
Confidence 764322 223346799999999999999999999999999999999999999975311 111111111
Q ss_pred hhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 399 LAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 399 ~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
...+.+.. ...++.++.+|+.+||+.||++|||+.|+++
T Consensus 362 ---~~~~~~~~---------------------~~~~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 362 ---NLPPRLKN---------------------LHKVSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp ---SCCCCCSC---------------------TTSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ---CCCCCCcc---------------------cccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11111100 1223567899999999999999999999876
No 13
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=8.7e-54 Score=396.87 Aligned_cols=247 Identities=25% Similarity=0.366 Sum_probs=188.8
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
++|++.+.||+|+||+||+|+ +..+++.||+|+++... ....+.+.+|++++++++|||||++++++ .++
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~--~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~-----~~~ 85 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAY--HTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVI-----KSK 85 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEE--CTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEE-----ECS
T ss_pred eCeEEEEEEecCcCeEEEEEE--ECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEE-----EEC
Confidence 689999999999999999998 55578999999997543 23346789999999999999999999984 455
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
+..++||||+ +|+|.+++... ..+++.++..++.||+.||+||| +++|+||||||+|||+++++.+||+|||
T Consensus 86 ~~~~ivmEy~-~g~L~~~l~~~----~~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDiKP~NILl~~~~~vkl~DFG 157 (275)
T 3hyh_A 86 DEIIMVIEYA-GNELFDYIVQR----DKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFG 157 (275)
T ss_dssp SEEEEEEECC-CEEHHHHHHHS----CSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTCCEEECCSS
T ss_pred CEEEEEEeCC-CCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCChHHeEECCCCCEEEeecC
Confidence 6899999999 78999999753 35999999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCCCCC-CcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhh
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEV-STSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEA 394 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 394 (484)
+|+...... .....+||+.|+|||++.+..+ +.++||||+||++|||+||+.||.+.. ........
T Consensus 158 la~~~~~~~--------~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~-----~~~~~~~i 224 (275)
T 3hyh_A 158 LSNIMTDGN--------FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES-----IPVLFKNI 224 (275)
T ss_dssp CC-----------------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHH
T ss_pred CCeecCCCC--------ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCC-----HHHHHHHH
Confidence 998653321 2234579999999999988776 579999999999999999999997531 11111111
Q ss_pred cchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 395 LPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 395 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
. ...... +..++.++.+++.+||+.||++|||++|+++.
T Consensus 225 ~--------~~~~~~---------------------p~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 225 S--------NGVYTL---------------------PKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp H--------HTCCCC---------------------CTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred H--------cCCCCC---------------------CCCCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 0 000000 11225568899999999999999999999863
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1.4e-53 Score=400.88 Aligned_cols=250 Identities=26% Similarity=0.291 Sum_probs=194.1
Q ss_pred CCCCccCccccccceeEEEEEEc-CCCCeeEEEEEEeeccC--ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFD-HDDHETLVAVKVLNLQH--RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
++|++.+.||+|+||+||+|+.. +..+++.||||+++... ......+.+|+++|++++|||||++++++. ++
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~-----~~ 98 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQ-----TE 98 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEE-----ET
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEE-----EC
Confidence 56999999999999999999853 23467899999997543 223356889999999999999999999854 45
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
+..++|||||+||+|.+++.... .+++.++..++.||+.||+||| +++|+||||||+|||++.++.+||+|||
T Consensus 99 ~~~~ivmEy~~gg~L~~~l~~~~----~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFG 171 (304)
T 3ubd_A 99 GKLYLILDFLRGGDLFTRLSKEV----MFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFG 171 (304)
T ss_dssp TEEEEEECCCTTCEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTSCEEEESSE
T ss_pred CEEEEEEEcCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHeEEcCCCCEEecccc
Confidence 58999999999999999998543 5899999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhc
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEAL 395 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 395 (484)
+|+...... ......+||+.|+|||++.+..|+.++||||+||++|||+||+.||.+... .+.....
T Consensus 172 la~~~~~~~-------~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~-----~~~~~~i- 238 (304)
T 3ubd_A 172 LSKESIDHE-------KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR-----KETMTMI- 238 (304)
T ss_dssp EEEC------------CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHH-
T ss_pred cceeccCCC-------ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCH-----HHHHHHH-
Confidence 998653321 222346799999999999999999999999999999999999999975321 1111111
Q ss_pred chhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCH-----HHHHH
Q 011508 396 PERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNM-----EEVAA 461 (484)
Q Consensus 396 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~-----~evl~ 461 (484)
....... +..++.++.+|+.+||+.||++|||+ +|+++
T Consensus 239 -------~~~~~~~---------------------p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~ 281 (304)
T 3ubd_A 239 -------LKAKLGM---------------------PQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR 281 (304)
T ss_dssp -------HHCCCCC---------------------CTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred -------HcCCCCC---------------------CCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence 1000000 12235678899999999999999985 56654
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=2e-52 Score=394.82 Aligned_cols=261 Identities=21% Similarity=0.319 Sum_probs=188.5
Q ss_pred CCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCcc-chHHHHHHHHHHHcCCCCCceeEeeeeeeecc------
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRG-ASKSFIAECQALRSIRHRNLVKIITSCVSVDF------ 232 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~------ 232 (484)
+|++.+.||+|+||+||+|+. ..+++.||||+++..... ..+.+.+|+++|++++|||||++++++...+.
T Consensus 6 dy~~~~~lG~G~fg~V~~a~~--~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~ 83 (299)
T 4g31_A 6 DFEPIQCLGRGGFGVVFEAKN--KVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQP 83 (299)
T ss_dssp HEEEEEEEEECC--EEEEEEE--TTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-------
T ss_pred hCEEeeEEecCCCeEEEEEEE--CCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccc
Confidence 588999999999999999994 446789999999765433 34678999999999999999999998765431
Q ss_pred -CCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEE
Q 011508 233 -QGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHV 311 (484)
Q Consensus 233 -~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl 311 (484)
....+.++|||||++|+|.+++..... ....++..++.++.||+.||+||| +++|+||||||+|||++.++.+||
T Consensus 84 ~~~~~~l~ivmE~~~gg~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~al~ylH---~~~IiHRDlKp~NILl~~~~~vKl 159 (299)
T 4g31_A 84 SSPKVYLYIQMQLCRKENLKDWMNGRCT-IEERERSVCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKV 159 (299)
T ss_dssp ---CEEEEEEEECCCSCCHHHHHHTCCS-GGGSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEE
T ss_pred cCCCcEEEEEEecCCCCcHHHHHHhcCC-CChhHHHHHHHHHHHHHHHHHHHH---HCcCccccCcHHHeEECCCCcEEE
Confidence 123457899999999999999975432 233567778999999999999999 899999999999999999999999
Q ss_pred cccCcccccccccccCCC-----CccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCcc
Q 011508 312 SDFGLAKFLPEAANNLSS-----NQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLT 386 (484)
Q Consensus 312 ~Dfg~a~~~~~~~~~~~~-----~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~ 386 (484)
+|||+|+.+......... ........+||+.|+|||++.+..|+.++|||||||++|||++ ||.....
T Consensus 160 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~---- 232 (299)
T 4g31_A 160 GDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQME---- 232 (299)
T ss_dssp CCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHH----
T ss_pred ccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccH----
Confidence 999999887543321110 1112234579999999999999999999999999999999996 7753210
Q ss_pred HhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 387 LHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 387 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
.... +..+.+..... ........+.+++.+||+.||++|||+.|+++
T Consensus 233 ~~~~--------~~~~~~~~~p~--------------------~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 233 RVRT--------LTDVRNLKFPP--------------------LFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HHHH--------HHHHHTTCCCH--------------------HHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHH--------HHHHhcCCCCC--------------------CCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 0000 00111000000 01122345678999999999999999999986
No 16
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.2e-49 Score=390.06 Aligned_cols=285 Identities=19% Similarity=0.210 Sum_probs=202.6
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCCCCceeEeeeeeeec-cCC
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIRHRNLVKIITSCVSVD-FQG 234 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~~ 234 (484)
.++|++.+.||+|+||+||+|+ +..+++.||||+++.... ...+.+.+|+++|++++|||||++++++.... +.+
T Consensus 53 ~~~Y~~~~~lG~G~fG~V~~a~--~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~ 130 (398)
T 4b99_A 53 GDEYEIIETIGNGAYGVVSSAR--RRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGE 130 (398)
T ss_dssp CSSEEEEEEEEECSSCEEEEEE--ETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTT
T ss_pred CCCeEEEEEEecccCeEEEEEE--ECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeeccccccc
Confidence 3679999999999999999999 445688999999975432 23457889999999999999999999865432 345
Q ss_pred CceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEccc
Q 011508 235 NDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDF 314 (484)
Q Consensus 235 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 314 (484)
....|+|||||+ |+|.+++.. ...+++.++..++.||+.||+||| +++|+||||||+|||++.++.+||+||
T Consensus 131 ~~~~~ivmE~~~-g~L~~~i~~----~~~l~~~~~~~~~~qil~al~ylH---~~~iiHRDlKP~NIl~~~~~~~Ki~DF 202 (398)
T 4b99_A 131 FKSVYVVLDLME-SDLHQIIHS----SQPLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDF 202 (398)
T ss_dssp CCCEEEEEECCS-EEHHHHHTS----SSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCC
T ss_pred CCEEEEEEeCCC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH---HCcCcCCCcCccccccCCCCCEEEeec
Confidence 567899999995 789999973 346999999999999999999999 899999999999999999999999999
Q ss_pred CcccccccccccCCCCccccccccccccccCccccCCC-CCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHh
Q 011508 315 GLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGS-EVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKE 393 (484)
Q Consensus 315 g~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 393 (484)
|+|+.+..... .........+||+.|+|||++.+. .++.++||||+||++|||++|+.||.+..... .+......
T Consensus 203 Gla~~~~~~~~---~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~-~l~~I~~~ 278 (398)
T 4b99_A 203 GMARGLCTSPA---EHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVH-QLQLIMMV 278 (398)
T ss_dssp TTCBCC----------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHH-HHHHHHHH
T ss_pred ceeeecccCcc---ccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHH-HHHHHHHh
Confidence 99987643221 112223456899999999998775 56999999999999999999999997632111 11111111
Q ss_pred hcc--hhhhhhcCc-ccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 394 ALP--ERLAEIVDP-VLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 394 ~~~--~~~~~~~d~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
... ......+.. ........ .....+............++.+|+.+||+.||++|||++|+++
T Consensus 279 ~g~p~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 279 LGTPSPAVIQAVGAERVRAYIQS-----LPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp HCCCCGGGTC-----CHHHHHHS-----SCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cCCCChHHhhhhhhhhhhhhhhc-----CCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 110 000000000 00000000 0000000000001122457889999999999999999999986
No 17
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=7.6e-49 Score=380.36 Aligned_cols=208 Identities=26% Similarity=0.369 Sum_probs=171.0
Q ss_pred HhcCCCCccCccccccceeEEEEEEc-CCCCeeEEEEEEeeccCccchHHHHHHHHHHHcC-CCCCceeEeeeeeeeccC
Q 011508 156 KATDGFSLENLIGAGSFGSVYKGIFD-HDDHETLVAVKVLNLQHRGASKSFIAECQALRSI-RHRNLVKIITSCVSVDFQ 233 (484)
Q Consensus 156 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 233 (484)
...++|++.+.||+|+||+||+|+.+ +..+++.||+|++.... ....+.+|+++|+.+ +||||+++++++ .
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~-----~ 90 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCF-----R 90 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEE-----E
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEE-----E
Confidence 34678999999999999999999854 33467899999986543 346788999999998 699999999985 4
Q ss_pred CCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCC-CceEEc
Q 011508 234 GNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGE-LTAHVS 312 (484)
Q Consensus 234 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~-~~~kl~ 312 (484)
.+++.++||||+++|+|.+++. .+++.++..++.||+.||+||| +++|+||||||+|||++.+ +.+||+
T Consensus 91 ~~~~~~lvmE~~~g~~L~~~~~-------~l~~~~~~~~~~qll~al~ylH---~~gIiHRDiKPeNiLl~~~~~~~kl~ 160 (361)
T 4f9c_A 91 KNDHVVIAMPYLEHESFLDILN-------SLSFQEVREYMLNLFKALKRIH---QFGIVHRDVKPSNFLYNRRLKKYALV 160 (361)
T ss_dssp ETTEEEEEEECCCCCCHHHHHT-------TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEEC
T ss_pred ECCEEEEEEeCCCcccHHHHHc-------CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCcCCHHHeEEeCCCCeEEEC
Confidence 4568999999999999999984 3889999999999999999999 8999999999999999877 799999
Q ss_pred ccCcccccccccccCC---------------------CCccccccccccccccCccccCCC-CCCcccceehhhHHHHHH
Q 011508 313 DFGLAKFLPEAANNLS---------------------SNQSSSVGVKGTVGYAAPEYGMGS-EVSTSGDVYSFGILLLEM 370 (484)
Q Consensus 313 Dfg~a~~~~~~~~~~~---------------------~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dvws~Gvvl~el 370 (484)
|||+|+.......... .........+||+.|+|||++.+. .|+.++||||+||++|||
T Consensus 161 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~el 240 (361)
T 4f9c_A 161 DFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSL 240 (361)
T ss_dssp CCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHH
T ss_pred cCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHH
Confidence 9999986543221100 001112345799999999998775 589999999999999999
Q ss_pred HhCCCCCCCC
Q 011508 371 FTGKGPTNEM 380 (484)
Q Consensus 371 ltg~~p~~~~ 380 (484)
+||+.||...
T Consensus 241 l~G~~Pf~~~ 250 (361)
T 4f9c_A 241 LSGRYPFYKA 250 (361)
T ss_dssp HHTCSSSSCC
T ss_pred HHCCCCCCCC
Confidence 9999999654
No 18
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=2.6e-47 Score=366.97 Aligned_cols=286 Identities=32% Similarity=0.471 Sum_probs=227.3
Q ss_pred cccHHhHHHhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeee
Q 011508 148 RVSYQNLFKATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSC 227 (484)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~ 227 (484)
+++..++...+++|++.+.||+|+||.||+|++. ++..||+|++........+.+.+|++++++++||||+++++++
T Consensus 28 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~ 104 (321)
T 2qkw_B 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLR---DGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFC 104 (321)
T ss_dssp --CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECT---TCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEEC
T ss_pred eecHHHHHHHHhccCccceeecCCCeeEEEEEEC---CCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence 4455566678899999999999999999999854 4678999998876666667899999999999999999999995
Q ss_pred eeeccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCC
Q 011508 228 VSVDFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGEL 307 (484)
Q Consensus 228 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~ 307 (484)
...+..++||||+++|+|.+++.........+++..++.++.|++.||+||| +++|+||||||+||+++.++
T Consensus 105 -----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~ 176 (321)
T 2qkw_B 105 -----DERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENF 176 (321)
T ss_dssp -----CCTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCSTTEEECTTC
T ss_pred -----cCCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhc---CCCeecCCCCHHHEEECCCC
Confidence 3455789999999999999999765544456999999999999999999999 89999999999999999999
Q ss_pred ceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCC-cc
Q 011508 308 TAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGN-LT 386 (484)
Q Consensus 308 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~-~~ 386 (484)
.+||+|||++........ ........||..|+|||++.+..++.++|||||||++|||++|+.||....... ..
T Consensus 177 ~~kl~Dfg~~~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~ 251 (321)
T 2qkw_B 177 VPKITDFGISKKGTELDQ-----THLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVN 251 (321)
T ss_dssp CEEECCCTTCEECSSSSC-----CCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCC
T ss_pred CEEEeecccccccccccc-----cccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHH
Confidence 999999999986532211 111223458999999999988899999999999999999999999997654322 22
Q ss_pred HhHHHHhhcch-hhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHH
Q 011508 387 LHNFVKEALPE-RLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLS 465 (484)
Q Consensus 387 ~~~~~~~~~~~-~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 465 (484)
...|....... .+..++++.+.. ....+++..+.+++.+||+.||++|||+.||++.|+.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~ 312 (321)
T 2qkw_B 252 LAEWAVESHNNGQLEQIVDPNLAD-------------------KIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEY 312 (321)
T ss_dssp HHHHTHHHHTTTCCCSSSSSSCTT-------------------CSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHhhhccccccHHHhcChhhcc-------------------ccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence 33333222111 123333332211 1134568889999999999999999999999999998
Q ss_pred HHH
Q 011508 466 FRN 468 (484)
Q Consensus 466 i~~ 468 (484)
+..
T Consensus 313 ~l~ 315 (321)
T 2qkw_B 313 ALR 315 (321)
T ss_dssp HHH
T ss_pred Hhh
Confidence 864
No 19
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=9.1e-48 Score=394.88 Aligned_cols=252 Identities=22% Similarity=0.291 Sum_probs=204.4
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCcee
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFE 238 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 238 (484)
++|++.+.||+|+||.||+|+. ..+++.||+|++........+.+.+|+++|+.++|||||++++++ .++...
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~--~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~-----~~~~~~ 229 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTE--RATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF-----EDDNEM 229 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEE--TTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEE-----ECSSEE
T ss_pred cccEEEEEEeeccCeEEEEEEE--CCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEE-----EECCEE
Confidence 5799999999999999999994 456789999999876655567889999999999999999999984 456689
Q ss_pred eEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCC--CceEEcccCc
Q 011508 239 ALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGE--LTAHVSDFGL 316 (484)
Q Consensus 239 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~--~~~kl~Dfg~ 316 (484)
++|||||+||+|.+++... ...+++.++..++.||+.||+||| +++|+||||||+|||++.+ +.+||+|||+
T Consensus 230 ~iv~E~~~gg~L~~~i~~~---~~~l~e~~~~~~~~qi~~al~ylH---~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~ 303 (573)
T 3uto_A 230 VMIYEFMSGGELFEKVADE---HNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGL 303 (573)
T ss_dssp EEEEECCCCCBHHHHHTCT---TSCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCSS
T ss_pred EEEEeecCCCcHHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhccccCCCCCCEEEeeccc
Confidence 9999999999999998632 245999999999999999999999 8999999999999999854 7999999999
Q ss_pred ccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcc
Q 011508 317 AKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALP 396 (484)
Q Consensus 317 a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 396 (484)
|+.+... ......+||+.|+|||++.+..|+.++||||+||++|||++|+.||.+.... +...
T Consensus 304 a~~~~~~--------~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~-----~~~~---- 366 (573)
T 3uto_A 304 TAHLDPK--------QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD-----ETLR---- 366 (573)
T ss_dssp CEECCTT--------SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH-----HHHH----
T ss_pred eeEccCC--------CceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH-----HHHH----
Confidence 9876432 1223457999999999999999999999999999999999999999763211 1111
Q ss_pred hhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 397 ERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 397 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
.+......... .....++.++.+|+.+||+.||.+|||+.|+++
T Consensus 367 ----~i~~~~~~~~~-----------------~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 367 ----NVKSCDWNMDD-----------------SAFSGISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp ----HHHTTCCCCCS-----------------GGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ----HHHhCCCCCCc-----------------ccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 11110000000 001223567889999999999999999999986
No 20
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=1.8e-47 Score=368.94 Aligned_cols=288 Identities=35% Similarity=0.550 Sum_probs=229.7
Q ss_pred hhccccHHhHHHhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeE
Q 011508 145 SVLRVSYQNLFKATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKI 223 (484)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~ 223 (484)
....++..++....++|++.+.||+|+||.||+|+.. +++.||||++..... .....+.+|+++++.++||||+++
T Consensus 16 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~ 92 (326)
T 3uim_A 16 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLA---DGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRL 92 (326)
T ss_dssp CCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCS---SSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCC
T ss_pred ccceecHHHHHHHhhccccceeEecCCCcEEEEEEec---CCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccce
Confidence 3567899999999999999999999999999999743 478899999875442 223478999999999999999999
Q ss_pred eeeeeeeccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeee
Q 011508 224 ITSCVSVDFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLL 303 (484)
Q Consensus 224 ~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll 303 (484)
++++. .....++||||+++|+|.+++.........+++..++.++.|++.||+|||+.+..+|+||||||+||++
T Consensus 93 ~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~ 167 (326)
T 3uim_A 93 RGFCM-----TPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILL 167 (326)
T ss_dssp CEEEC-----CSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEE
T ss_pred EEEEe-----cCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEE
Confidence 99964 3447799999999999999998766556679999999999999999999994322399999999999999
Q ss_pred cCCCceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCC---
Q 011508 304 DGELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEM--- 380 (484)
Q Consensus 304 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~--- 380 (484)
+.++.+||+|||++....... ........||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 168 ~~~~~~kl~Dfg~~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~ 241 (326)
T 3uim_A 168 DEEFEAVVGDFGLAKLMDYKD------THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLA 241 (326)
T ss_dssp CTTCCEEECCCSSCEECCSSS------SCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHT
T ss_pred CCCCCEEeccCccccccCccc------ccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccc
Confidence 999999999999998764322 12223345999999999998888999999999999999999999999632
Q ss_pred ccCCccHhHHHHhhcchh-hhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHH
Q 011508 381 FTGNLTLHNFVKEALPER-LAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEV 459 (484)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~-~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev 459 (484)
.........|+....... ...+.+..+... ...++...+.+++..||+.||++|||+.||
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~l~~li~~cl~~dP~~Rps~~el 302 (326)
T 3uim_A 242 NDDDVMLLDWVKGLLKEKKLEALVDVDLQGN-------------------YKDEEVEQLIQVALLCTQSSPMERPKMSEV 302 (326)
T ss_dssp TTSCSBHHHHHTTTTSSCCSTTSSCTTCTTS-------------------CCHHHHHHHHHHHHHHTCSCGGGSCCHHHH
T ss_pred cccchhHHHHHHHHhhchhhhhhcChhhccc-------------------cCHHHHHHHHHHHHHHhCcCCccCCCHHHH
Confidence 122334445554443332 333333332221 134557889999999999999999999999
Q ss_pred HHHHHH
Q 011508 460 AAQLLS 465 (484)
Q Consensus 460 l~~L~~ 465 (484)
++.|+.
T Consensus 303 l~~L~~ 308 (326)
T 3uim_A 303 VRMLEG 308 (326)
T ss_dssp HHHHHT
T ss_pred HHHhcC
Confidence 999975
No 21
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=1.7e-47 Score=390.19 Aligned_cols=249 Identities=24% Similarity=0.306 Sum_probs=196.2
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHH---HHHHHHHcCCCCCceeEeeeeeeecc
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFI---AECQALRSIRHRNLVKIITSCVSVDF 232 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~---~e~~~l~~l~h~niv~~~~~~~~~~~ 232 (484)
++|++.+.||+|+||.||+|+. ..+++.||||++++.. ........ .++.+++.++|||||+++++ +
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~--~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~-----f 261 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRK--ADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYA-----F 261 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEE--TTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEE-----E
T ss_pred HHeEEEEEEecccCeEEEEEEE--CCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEE-----E
Confidence 5799999999999999999994 4568999999997432 12222333 44677778899999999998 4
Q ss_pred CCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEc
Q 011508 233 QGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVS 312 (484)
Q Consensus 233 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~ 312 (484)
++.+..|+|||||+||+|.+++.... .+++..+..++.||+.||+||| +++||||||||+||||+.+|.+||+
T Consensus 262 ~~~~~lylVmEy~~GGdL~~~l~~~~----~l~E~~a~~y~~qIl~aL~yLH---~~gIiHRDLKPeNILld~~G~vKL~ 334 (689)
T 3v5w_A 262 HTPDKLSFILDLMNGGDLHYHLSQHG----VFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRIS 334 (689)
T ss_dssp ECSSEEEEEECCCCSCBHHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTSCEEEC
T ss_pred EECCEEEEEEecCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHeEEeCCCCEEec
Confidence 55668999999999999999998543 4899999999999999999999 9999999999999999999999999
Q ss_pred ccCcccccccccccCCCCccccccccccccccCccccCC-CCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHH
Q 011508 313 DFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFV 391 (484)
Q Consensus 313 Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 391 (484)
|||+|+.+... .....+||+.|+|||++.. ..|+.++||||+||++|||++|+.||.+..... .....
T Consensus 335 DFGlA~~~~~~---------~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~--~~~i~ 403 (689)
T 3v5w_A 335 DLGLACDFSKK---------KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD--KHEID 403 (689)
T ss_dssp CCTTCEECSSC---------CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCC--HHHHH
T ss_pred ccceeeecCCC---------CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH--HHHHH
Confidence 99999876332 1234579999999999864 579999999999999999999999997632221 11111
Q ss_pred HhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCC-----HHHHHH
Q 011508 392 KEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMN-----MEEVAA 461 (484)
Q Consensus 392 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~evl~ 461 (484)
.... ...... +..++.++.+|+.+||+.||.+|++ ++||++
T Consensus 404 ~~i~--------~~~~~~---------------------p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 404 RMTL--------TMAVEL---------------------PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp HHHH--------HCCCCC---------------------CTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred Hhhc--------CCCCCC---------------------CccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 1110 000000 1223567899999999999999998 677764
No 22
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=7.4e-47 Score=361.96 Aligned_cols=276 Identities=24% Similarity=0.361 Sum_probs=216.4
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
.++|.+.+.||+|+||.||+|+.. .++..||+|++........+.+.+|++++++++||||+++++++.. +..
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~--~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-----~~~ 81 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHR--ETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYK-----DKR 81 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEET--TTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE-----TTE
T ss_pred hhHeeccceecCCCCEEEEEEEEC--CCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEec-----CCe
Confidence 357889999999999999999954 4578899999876555566789999999999999999999999643 447
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
.++||||+++|+|.+++... ...+++.+++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||++
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~ 155 (310)
T 3s95_A 82 LNFITEYIKGGTLRGIIKSM---DSQYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLA 155 (310)
T ss_dssp EEEEEECCTTCBHHHHHHHC---CTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEECTTSCEEECCCTTC
T ss_pred eEEEEEecCCCcHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCcCeEEECCCCCEEEeecccc
Confidence 89999999999999999853 245899999999999999999999 899999999999999999999999999999
Q ss_pred cccccccccCCC-------CccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHH
Q 011508 318 KFLPEAANNLSS-------NQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNF 390 (484)
Q Consensus 318 ~~~~~~~~~~~~-------~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~ 390 (484)
............ .........||+.|+|||++.+..++.++||||||+++|||++|..||.............
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~ 235 (310)
T 3s95_A 156 RLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLN 235 (310)
T ss_dssp EECC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBC
T ss_pred eecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhh
Confidence 876443221110 0111124579999999999999999999999999999999999999987543322111110
Q ss_pred HHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHHHH
Q 011508 391 VKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRNKL 470 (484)
Q Consensus 391 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~ 470 (484)
.... .+.. .+..++..+.+++.+||+.||++|||+.|+++.|+.++..+
T Consensus 236 ~~~~--------~~~~-----------------------~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~ 284 (310)
T 3s95_A 236 VRGF--------LDRY-----------------------CPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHL 284 (310)
T ss_dssp HHHH--------HHHT-----------------------CCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred hhcc--------cccc-----------------------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence 0000 0000 01223456889999999999999999999999999999888
Q ss_pred hhccCCC
Q 011508 471 VKNVRGQ 477 (484)
Q Consensus 471 ~~~~~~~ 477 (484)
....+..
T Consensus 285 ~~~~~~~ 291 (310)
T 3s95_A 285 AGHLPLG 291 (310)
T ss_dssp HHCCCCH
T ss_pred cCcccCC
Confidence 6655443
No 23
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=6.9e-46 Score=356.96 Aligned_cols=281 Identities=23% Similarity=0.284 Sum_probs=211.0
Q ss_pred HhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 156 KATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 156 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
...++|++.+.||+|+||.||+|++. ++.||||++.... ........|+.++++++||||+++++++.... ...
T Consensus 21 ~~~~~y~~~~~lg~G~~g~Vy~~~~~----~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-~~~ 94 (322)
T 3soc_A 21 FQSMPLQLLEVKARGRFGCVWKAQLL----NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGT-SVD 94 (322)
T ss_dssp ETTEEEEEEEEEECSTTCEEEEEEET----TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC-SSS
T ss_pred cchhhchhhheecccCceEEEEEEEC----CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCC-CCC
Confidence 34467999999999999999999864 5789999997543 23345667999999999999999999976543 223
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC----------CeeecCCCCCCeeecC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCET----------PIVHCDLKPSNVLLDG 305 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~----------~ivH~dlk~~NIll~~ 305 (484)
...++||||+++|+|.++++.. .+++..++.++.|++.||+||| +. +|+||||||+||+++.
T Consensus 95 ~~~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~qi~~al~~LH---~~~~~l~~~~~~~ivH~Dlkp~Nill~~ 166 (322)
T 3soc_A 95 VDLWLITAFHEKGSLSDFLKAN-----VVSWNELCHIAETMARGLAYLH---EDIPGLKDGHKPAISHRDIKSKNVLLKN 166 (322)
T ss_dssp EEEEEEEECCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHT---CCEEEETTEEECEEECSCCSGGGEEECT
T ss_pred ceEEEEEecCCCCCHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHH---hhccccccccCCCEEeCCCChHhEEECC
Confidence 4579999999999999999743 3899999999999999999999 77 9999999999999999
Q ss_pred CCceEEcccCcccccccccccCCCCccccccccccccccCccccCC-----CCCCcccceehhhHHHHHHHhCCCCCCCC
Q 011508 306 ELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-----SEVSTSGDVYSFGILLLEMFTGKGPTNEM 380 (484)
Q Consensus 306 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-----~~~~~~~Dvws~Gvvl~elltg~~p~~~~ 380 (484)
++.+||+|||+++....... ........||+.|+|||++.+ ..++.++|||||||++|||+||+.||...
T Consensus 167 ~~~~kL~DFg~a~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~ 241 (322)
T 3soc_A 167 NLTACIADFGLALKFEAGKS-----AGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGP 241 (322)
T ss_dssp TCCEEECCCTTCEEECTTSC-----CCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSC
T ss_pred CCeEEEccCCcccccccccC-----ccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCC
Confidence 99999999999987643321 112233569999999999876 35677899999999999999999999764
Q ss_pred ccCCcc-HhHHHHhhc-chhhhhh-cCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHH
Q 011508 381 FTGNLT-LHNFVKEAL-PERLAEI-VDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNME 457 (484)
Q Consensus 381 ~~~~~~-~~~~~~~~~-~~~~~~~-~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ 457 (484)
...... +........ ...+.+. ........ .........++.++.+++.+||+.||++|||+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ 307 (322)
T 3soc_A 242 VDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPV--------------LRDYWQKHAGMAMLCETIEECWDHDAEARLSAG 307 (322)
T ss_dssp CCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCC--------------CCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHH
T ss_pred cchhccchhhhhccCCchhhhhhhhhcccCCCC--------------ccccccccchHHHHHHHHHHHccCChhhCcCHH
Confidence 332211 111111000 0011111 11111000 000111234577899999999999999999999
Q ss_pred HHHHHHHHHHHH
Q 011508 458 EVAAQLLSFRNK 469 (484)
Q Consensus 458 evl~~L~~i~~~ 469 (484)
||++.|+++++.
T Consensus 308 ell~~L~~l~~~ 319 (322)
T 3soc_A 308 CVGERITQMQRL 319 (322)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999999764
No 24
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1.1e-45 Score=351.43 Aligned_cols=251 Identities=22% Similarity=0.297 Sum_probs=204.9
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
.++|++.+.||+|+||+||+|. +..+++.||+|++........+.+.+|+.++++++||||+++++++.. ++.
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-----~~~ 91 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAM--DVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV-----GDE 91 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEE--BTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEE-----TTE
T ss_pred hhceeeeeeeccCCCeEEEEEE--ECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEE-----CCE
Confidence 4679999999999999999998 445678999999987766667789999999999999999999998643 447
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
.++||||+++|+|.+++... .+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||++
T Consensus 92 ~~lv~e~~~~~~L~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~ 163 (297)
T 3fxz_A 92 LWVVMEYLAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFC 163 (297)
T ss_dssp EEEEEECCTTCBHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEECCCCCCHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEECCCCCEEEeeCCCc
Confidence 89999999999999999743 4889999999999999999999 899999999999999999999999999998
Q ss_pred cccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcch
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPE 397 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 397 (484)
....... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... . ......
T Consensus 164 ~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~----~-~~~~~~-- 229 (297)
T 3fxz_A 164 AQITPEQ-------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL----R-ALYLIA-- 229 (297)
T ss_dssp EECCSTT-------CCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH----H-HHHHHH--
T ss_pred eecCCcc-------cccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH----H-HHHHHH--
Confidence 8664322 1223456999999999999999999999999999999999999999653211 0 000000
Q ss_pred hhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 398 RLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 398 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
....+.+. .+..++..+.+++.+||+.||++|||++|+++
T Consensus 230 ---~~~~~~~~---------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 230 ---TNGTPELQ---------------------NPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp ---HHCSCCCS---------------------CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ---hCCCCCCC---------------------CccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 00000000 02233567899999999999999999999986
No 25
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=3e-46 Score=355.18 Aligned_cols=281 Identities=24% Similarity=0.383 Sum_probs=210.3
Q ss_pred cCCCCccCccccccceeEEEEEEc--CCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFD--HDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~--~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
.++|++.+.||+|+||.||+|++. +..+++.||||++........+.+.+|++++++++||||+++++++...+ .
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---~ 85 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG---R 85 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHH---H
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC---C
Confidence 367899999999999999999864 34467899999998665555678999999999999999999999875322 3
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
...++||||+++|+|.+++.... ..+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||
T Consensus 86 ~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg 159 (295)
T 3ugc_A 86 RNLKLIMEYLPYGSLRDYLQKHK---ERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFG 159 (295)
T ss_dssp TSCEEEEECCTTCBHHHHHHHCG---GGCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCC
T ss_pred CceEEEEEeCCCCCHHHHHHhcc---cccCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHhhEEEcCCCeEEEccCc
Confidence 45789999999999999997542 35899999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhc
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEAL 395 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 395 (484)
++......... ........++..|+|||.+.+..++.++||||||+++|||+||..||...... .........
T Consensus 160 ~~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~---~~~~~~~~~ 232 (295)
T 3ugc_A 160 LTKVLPQDKEF----FKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE---FMRMIGNDK 232 (295)
T ss_dssp SCC-----------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHH---HHHHHCTTC
T ss_pred ccccccCCcce----eeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHH---HHhhhcCcc
Confidence 99876443211 11122345778899999998889999999999999999999999998653110 000000000
Q ss_pred chh--hhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHHHH
Q 011508 396 PER--LAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRNKL 470 (484)
Q Consensus 396 ~~~--~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~ 470 (484)
... ...+.+. +. ...+...+..++.++.+++..||+.||++|||+.|+++.|+++++.+
T Consensus 233 ~~~~~~~~~~~~-~~---------------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l 293 (295)
T 3ugc_A 233 QGQMIVFHLIEL-LK---------------NNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293 (295)
T ss_dssp CTHHHHHHHHHH-HH---------------TTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred ccchhHHHHHHH-Hh---------------ccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhc
Confidence 000 0000000 00 00001113445778999999999999999999999999999998765
No 26
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=1.6e-45 Score=360.66 Aligned_cols=284 Identities=19% Similarity=0.237 Sum_probs=217.1
Q ss_pred hcCCCCccCccccccceeEEEEEEcCCC---CeeEEEEEEeeccCccc-----------hHHHHHHHHHHHcCCCCCcee
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHDD---HETLVAVKVLNLQHRGA-----------SKSFIAECQALRSIRHRNLVK 222 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~---~~~~vavK~~~~~~~~~-----------~~~~~~e~~~l~~l~h~niv~ 222 (484)
..++|.+.+.||+|+||.||+|.+..+. .++.||||++....... ...+..|+..+..++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 4568999999999999999999875432 35789999987543211 123445666777888999999
Q ss_pred EeeeeeeeccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCee
Q 011508 223 IITSCVSVDFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVL 302 (484)
Q Consensus 223 ~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIl 302 (484)
+++++.... .+..+.++||||+ +++|.+++... ...+++..++.++.||+.||+||| +++|+||||||+|||
T Consensus 113 ~~~~~~~~~-~~~~~~~lv~e~~-g~~L~~~~~~~---~~~l~~~~~~~i~~qi~~~l~~lH---~~~iiHrDlkp~Nil 184 (364)
T 3op5_A 113 YWGSGLHDK-NGKSYRFMIMDRF-GSDLQKIYEAN---AKRFSRKTVLQLSLRILDILEYIH---EHEYVHGDIKASNLL 184 (364)
T ss_dssp EEEEEEEEE-TTEEEEEEEEECE-EEEHHHHHHHT---TSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEE
T ss_pred EEeeeeecc-CCcceEEEEEeCC-CCCHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEEecCCHHHEE
Confidence 999986542 3345789999999 99999999753 245999999999999999999999 889999999999999
Q ss_pred ec--CCCceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCC
Q 011508 303 LD--GELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEM 380 (484)
Q Consensus 303 l~--~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~ 380 (484)
++ .++.+||+|||+++.+..................||+.|+|||++.+..++.++|||||||++|||+||+.||...
T Consensus 185 l~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~ 264 (364)
T 3op5_A 185 LNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDN 264 (364)
T ss_dssp EESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred EecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcccc
Confidence 99 8899999999999877554322222222223456999999999999999999999999999999999999999764
Q ss_pred ccCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHH
Q 011508 381 FTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVA 460 (484)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl 460 (484)
.... .............+.+++++.+.. ..++.++.+++..||+.||++||++.+|+
T Consensus 265 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~li~~cl~~~p~~RP~~~~l~ 321 (364)
T 3op5_A 265 LKDP-KYVRDSKIRYRENIASLMDKCFPA----------------------ANAPGEIAKYMETVKLLDYTEKPLYENLR 321 (364)
T ss_dssp TTCH-HHHHHHHHHHHHCHHHHHHHHSCT----------------------TCCCHHHHHHHHHHHTCCTTCCCCHHHHH
T ss_pred ccCH-HHHHHHHHHhhhhHHHHHHHhccc----------------------ccCHHHHHHHHHHHhcCCCCCCCCHHHHH
Confidence 3221 222222222233344444333211 22366789999999999999999999999
Q ss_pred HHHHHHHHHHh
Q 011508 461 AQLLSFRNKLV 471 (484)
Q Consensus 461 ~~L~~i~~~~~ 471 (484)
+.|+.+.....
T Consensus 322 ~~l~~~~~~~~ 332 (364)
T 3op5_A 322 DILLQGLKAIG 332 (364)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHcC
Confidence 99999887654
No 27
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=3.2e-45 Score=358.72 Aligned_cols=267 Identities=23% Similarity=0.376 Sum_probs=211.6
Q ss_pred cCCCCccCccccccceeEEEEEEcC-----CCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcC-CCCCceeEeeeeeee
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDH-----DDHETLVAVKVLNLQHR-GASKSFIAECQALRSI-RHRNLVKIITSCVSV 230 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 230 (484)
.++|.+.+.||+|+||.||+|+... ...+..||||+++.... ...+.+.+|+.+++++ +||||++++++|.
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~-- 157 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT-- 157 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEEC--
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEc--
Confidence 3678899999999999999998642 23567899999976533 2346789999999999 8999999999853
Q ss_pred ccCCCceeeEEeecccCCCHHHHHhhcCC------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCC
Q 011508 231 DFQGNDFEALVYELMVNGSLEEWLHLNRD------------APRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKP 298 (484)
Q Consensus 231 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~ 298 (484)
..+..++||||+++|+|.+++..... ....+++.+++.++.||+.||+||| +++|+||||||
T Consensus 158 ---~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp 231 (370)
T 2psq_A 158 ---QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAA 231 (370)
T ss_dssp ---SSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCG
T ss_pred ---cCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccch
Confidence 44578999999999999999986532 1235899999999999999999999 89999999999
Q ss_pred CCeeecCCCceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCC
Q 011508 299 SNVLLDGELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPT 377 (484)
Q Consensus 299 ~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~ 377 (484)
+|||++.++.+||+|||+++....... ........+|+.|+|||++.+..++.++|||||||++|||+| |+.||
T Consensus 232 ~NIll~~~~~~kl~DFG~a~~~~~~~~-----~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~ 306 (370)
T 2psq_A 232 RNVLVTENNVMKIADFGLARDINNIDY-----YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 306 (370)
T ss_dssp GGEEECTTCCEEECCCSSCEETTCCCT-----TCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred hhEEECCCCCEEEccccCCcccCcccc-----eecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCC
Confidence 999999999999999999986643221 111223457889999999999999999999999999999999 99999
Q ss_pred CCCccCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHH
Q 011508 378 NEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNME 457 (484)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ 457 (484)
...... .+...+... ... ..+..++.++.+++..||+.||++|||+.
T Consensus 307 ~~~~~~--~~~~~~~~~--------~~~-----------------------~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ 353 (370)
T 2psq_A 307 PGIPVE--ELFKLLKEG--------HRM-----------------------DKPANCTNELYMMMRDCWHAVPSQRPTFK 353 (370)
T ss_dssp TTCCGG--GHHHHHHTT--------CCC-----------------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred CCCCHH--HHHHHHhcC--------CCC-----------------------CCCCCCCHHHHHHHHHHcCCChhhCcCHH
Confidence 753211 111111000 000 00223466789999999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 011508 458 EVAAQLLSFRNKL 470 (484)
Q Consensus 458 evl~~L~~i~~~~ 470 (484)
|+++.|+.+....
T Consensus 354 ell~~L~~il~~~ 366 (370)
T 2psq_A 354 QLVEDLDRILTLT 366 (370)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999999987654
No 28
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=7.3e-46 Score=357.10 Aligned_cols=266 Identities=24% Similarity=0.390 Sum_probs=208.3
Q ss_pred cCCCCccCccccccceeEEEEEEcCCC-CeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDD-HETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
.++|++.+.||+|+||.||+|++...+ .+..||||+++.... ...+.+.+|+.++++++||||+++++++ ..+
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~ 122 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVV-----TRG 122 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-----CGG
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEE-----EeC
Confidence 357889999999999999999975432 356799999976533 3346789999999999999999999995 344
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
...++||||+++|+|.+++... ...+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||
T Consensus 123 ~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 196 (325)
T 3kul_A 123 RLAMIVTEYMENGSLDTFLRTH---DGQFTIMQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFG 196 (325)
T ss_dssp GCCEEEEECCTTCBHHHHHHTT---TTCSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCS
T ss_pred CccEEEeeCCCCCcHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEECCCCCEEECCCC
Confidence 5789999999999999999643 235899999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhh
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEA 394 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~ 394 (484)
+++........ ........+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... ......
T Consensus 197 ~a~~~~~~~~~----~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~-----~~~~~~ 267 (325)
T 3kul_A 197 LSRVLEDDPDA----AYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR-----DVISSV 267 (325)
T ss_dssp SCEECC----C----CEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH-----HHHHHH
T ss_pred cccccccCccc----eeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH-----HHHHHH
Confidence 99876443211 111223346788999999988899999999999999999999 99999653211 111100
Q ss_pred cchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHHHHh
Q 011508 395 LPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRNKLV 471 (484)
Q Consensus 395 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~~ 471 (484)
...... ..+..++..+.+++..||+.||++|||+.||++.|+.+.....
T Consensus 268 -----~~~~~~-----------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~ 316 (325)
T 3kul_A 268 -----EEGYRL-----------------------PAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPE 316 (325)
T ss_dssp -----HTTCCC-----------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC
T ss_pred -----HcCCCC-----------------------CCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCcc
Confidence 000000 0022346678999999999999999999999999999876543
No 29
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=2.7e-44 Score=343.67 Aligned_cols=283 Identities=30% Similarity=0.448 Sum_probs=222.3
Q ss_pred hccccHHhHHHhcCCCCcc------CccccccceeEEEEEEcCCCCeeEEEEEEeeccC----ccchHHHHHHHHHHHcC
Q 011508 146 VLRVSYQNLFKATDGFSLE------NLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH----RGASKSFIAECQALRSI 215 (484)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~------~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l 215 (484)
...+++.++..++++|... +.||+|+||.||+|.. .++.||+|++.... ....+.+.+|+.+++++
T Consensus 12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l 87 (307)
T 2nru_A 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV----NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKC 87 (307)
T ss_dssp CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES----SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHC
T ss_pred CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE----CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhc
Confidence 4568889999999998877 8999999999999984 35789999986432 22346789999999999
Q ss_pred CCCCceeEeeeeeeeccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecC
Q 011508 216 RHRNLVKIITSCVSVDFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCD 295 (484)
Q Consensus 216 ~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~d 295 (484)
+||||+++++++ ...+..++||||+++++|.+++..... ...+++..++.++.|++.||+||| +++|+|||
T Consensus 88 ~h~~i~~~~~~~-----~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~d 158 (307)
T 2nru_A 88 QHENLVELLGFS-----SDGDDLCLVYVYMPNGSLLDRLSCLDG-TPPLSWHMRCKIAQGAANGINFLH---ENHHIHRD 158 (307)
T ss_dssp CCTTBCCEEEEE-----CSSSSCEEEEECCTTCBHHHHHHTGGG-CCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSC
T ss_pred CCCCeEEEEEEE-----ecCCceEEEEEecCCCcHHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHh---cCCeecCC
Confidence 999999999985 344578999999999999999975432 345899999999999999999999 89999999
Q ss_pred CCCCCeeecCCCceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCC
Q 011508 296 LKPSNVLLDGELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKG 375 (484)
Q Consensus 296 lk~~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~ 375 (484)
|||+||+++.++.+||+|||++........ ........|++.|+|||.+.+ .++.++||||||+++|+|++|+.
T Consensus 159 lkp~Nili~~~~~~kl~Dfg~~~~~~~~~~-----~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~ 232 (307)
T 2nru_A 159 IKSANILLDEAFTAKISDFGLARASEKFAQ-----TVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLP 232 (307)
T ss_dssp CCGGGEEECTTCCEEECCCTTCEECCSCSS-----CEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCC
T ss_pred CCHHHEEEcCCCcEEEeecccccccccccc-----cccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCC
Confidence 999999999999999999999986543221 111223468999999998765 58899999999999999999999
Q ss_pred CCCCCccCCccHhHHHHhhc--chhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCC
Q 011508 376 PTNEMFTGNLTLHNFVKEAL--PERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRER 453 (484)
Q Consensus 376 p~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R 453 (484)
||....... .+..+..... ...+.+.+++.+.. ....++..+.+++..||+.||.+|
T Consensus 233 p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~l~~li~~cl~~~p~~R 291 (307)
T 2nru_A 233 AVDEHREPQ-LLLDIKEEIEDEEKTIEDYIDKKMND--------------------ADSTSVEAMYSVASQCLHEKKNKR 291 (307)
T ss_dssp SBCTTBSSS-BTTHHHHHHHTTSCCHHHHSCSSCSC--------------------CCHHHHHHHHHHHHHHTCSSTTTS
T ss_pred CcccCcchH-HHHHHHHHhhhhhhhhhhhccccccc--------------------cchHHHHHHHHHHHHHcCCCcccC
Confidence 997643322 2222222111 11133444433211 134457789999999999999999
Q ss_pred CCHHHHHHHHHHHHH
Q 011508 454 MNMEEVAAQLLSFRN 468 (484)
Q Consensus 454 Pt~~evl~~L~~i~~ 468 (484)
||+.||++.|+++++
T Consensus 292 ps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 292 PDIKKVQQLLQEMTA 306 (307)
T ss_dssp CCHHHHHHHHHHHC-
T ss_pred cCHHHHHHHHHHHhc
Confidence 999999999998854
No 30
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=1.7e-45 Score=360.05 Aligned_cols=279 Identities=22% Similarity=0.309 Sum_probs=217.3
Q ss_pred cccHHhHHHhcCCCCccCccccccceeEEEEEEc---CCCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcC-CCCCcee
Q 011508 148 RVSYQNLFKATDGFSLENLIGAGSFGSVYKGIFD---HDDHETLVAVKVLNLQHR-GASKSFIAECQALRSI-RHRNLVK 222 (484)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~---~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~ 222 (484)
.+....+....++|++.+.||+|+||.||+|++. +..+++.||||+++.... ...+.+.+|++++.++ +||||++
T Consensus 11 ~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~ 90 (359)
T 3vhe_A 11 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 90 (359)
T ss_dssp CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred CCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceee
Confidence 3444555566788999999999999999999864 345678999999976433 2345789999999999 8999999
Q ss_pred EeeeeeeeccCCCceeeEEeecccCCCHHHHHhhcCCC------------------------------------------
Q 011508 223 IITSCVSVDFQGNDFEALVYELMVNGSLEEWLHLNRDA------------------------------------------ 260 (484)
Q Consensus 223 ~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~------------------------------------------ 260 (484)
+++++. ..+...++||||+++|+|.++++.....
T Consensus 91 ~~~~~~----~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (359)
T 3vhe_A 91 LLGACT----KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSG 166 (359)
T ss_dssp EEEEEC----STTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-------------------------------------
T ss_pred eeeeee----cCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccc
Confidence 999873 3344589999999999999999854321
Q ss_pred --------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccccc
Q 011508 261 --------------------PRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFL 320 (484)
Q Consensus 261 --------------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~ 320 (484)
...+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||++...
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~ 243 (359)
T 3vhe_A 167 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDI 243 (359)
T ss_dssp -----------------CTTTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCT
T ss_pred cccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCcEEEEeccceeee
Confidence 112899999999999999999999 899999999999999999999999999999866
Q ss_pred ccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhhcchhh
Q 011508 321 PEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEALPERL 399 (484)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 399 (484)
..... ........||..|+|||++.+..++.++|||||||++|||+| |+.||........ +.......
T Consensus 244 ~~~~~-----~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~-~~~~~~~~----- 312 (359)
T 3vhe_A 244 YKDPD-----YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-FCRRLKEG----- 312 (359)
T ss_dssp TSCTT-----CEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH-HHHHHHHT-----
T ss_pred ccccc-----chhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHH-HHHHHHcC-----
Confidence 33221 112233568899999999988899999999999999999998 9999976432211 11111100
Q ss_pred hhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHHHH
Q 011508 400 AEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRNKL 470 (484)
Q Consensus 400 ~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~ 470 (484)
..... +..++.++.+++..||+.||++|||+.||++.|+.+.+..
T Consensus 313 ---~~~~~-----------------------~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 357 (359)
T 3vhe_A 313 ---TRMRA-----------------------PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 357 (359)
T ss_dssp ---CCCCC-----------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ---CCCCC-----------------------CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHHh
Confidence 00000 1223567899999999999999999999999999987654
No 31
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=9.1e-45 Score=345.88 Aligned_cols=271 Identities=24% Similarity=0.381 Sum_probs=205.8
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHc--CCCCCceeEeeeeeeeccCCC
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRS--IRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~~~~~~~~~~ 235 (484)
.++|++.+.||+|+||.||+|++. ++.||||++... ....+..|.+++.. ++||||+++++++.... ...
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~----~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~-~~~ 78 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSWQ----GENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSR-HSS 78 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEET----TEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEE-TTE
T ss_pred cCcEEEEEeeccCCCcEEEEEEEC----CEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeecccc-CCC
Confidence 467999999999999999999863 678999998643 33556667777766 79999999999876543 345
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-----CCCeeecCCCCCCeeecCCCceE
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYC-----ETPIVHCDLKPSNVLLDGELTAH 310 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-----~~~ivH~dlk~~NIll~~~~~~k 310 (484)
...++||||+++|+|.++++. ..+++..++.++.|++.||+|||... +++|+||||||+||+++.++.+|
T Consensus 79 ~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~k 153 (301)
T 3q4u_A 79 TQLWLITHYHEMGSLYDYLQL-----TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCC 153 (301)
T ss_dssp EEEEEEECCCTTCBHHHHHTT-----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEE
T ss_pred ceeEEehhhccCCCHHHHHhh-----cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEE
Confidence 578999999999999999963 35899999999999999999999321 57999999999999999999999
Q ss_pred EcccCcccccccccccCCCCccccccccccccccCccccCCC------CCCcccceehhhHHHHHHHhC----------C
Q 011508 311 VSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGS------EVSTSGDVYSFGILLLEMFTG----------K 374 (484)
Q Consensus 311 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~------~~~~~~Dvws~Gvvl~elltg----------~ 374 (484)
|+|||+++......... ........||+.|+|||++.+. .++.++|||||||++|||+|| +
T Consensus 154 l~Dfg~a~~~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~ 230 (301)
T 3q4u_A 154 IADLGLAVMHSQSTNQL---DVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYK 230 (301)
T ss_dssp ECCCTTCEEEETTTTEE---ECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCC
T ss_pred EeeCCCeeecccccccc---cccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccc
Confidence 99999997654332111 1112234699999999998876 556799999999999999999 7
Q ss_pred CCCCCCccCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCC
Q 011508 375 GPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERM 454 (484)
Q Consensus 375 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP 454 (484)
.||..................... ..+.+. .......++..+.+++.+||+.||++||
T Consensus 231 ~pf~~~~~~~~~~~~~~~~~~~~~----~~~~~~------------------~~~~~~~~~~~l~~li~~cl~~dP~~Rp 288 (301)
T 3q4u_A 231 PPFYDVVPNDPSFEDMRKVVCVDQ----QRPNIP------------------NRWFSDPTLTSLAKLMKECWYQNPSARL 288 (301)
T ss_dssp CTTTTTSCSSCCHHHHHHHHTTSC----CCCCCC------------------GGGGGSHHHHHHHHHHHHHCCSSGGGSC
T ss_pred ccccccCCCCcchhhhhHHHhccC----CCCCCC------------------hhhccCccHHHHHHHHHHHhhcChhhCC
Confidence 787665443333322222111100 000000 0011234578899999999999999999
Q ss_pred CHHHHHHHHHHH
Q 011508 455 NMEEVAAQLLSF 466 (484)
Q Consensus 455 t~~evl~~L~~i 466 (484)
|+.||++.|+++
T Consensus 289 s~~~i~~~L~~i 300 (301)
T 3q4u_A 289 TALRIKKTLTKI 300 (301)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHhcc
Confidence 999999999876
No 32
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=4.7e-45 Score=348.75 Aligned_cols=263 Identities=30% Similarity=0.380 Sum_probs=199.6
Q ss_pred HhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccC
Q 011508 156 KATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQ 233 (484)
Q Consensus 156 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 233 (484)
...++|++.+.||+|+||+||+|+.. ++.||+|++..... ...+.+.+|++++++++||||+++++++ .
T Consensus 34 i~~~~y~i~~~lG~G~~g~V~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~ 104 (309)
T 3p86_A 34 IPWCDLNIKEKIGAGSFGTVHRAEWH----GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV-----T 104 (309)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEET----TEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----C
T ss_pred CChhHceeeeEeecCCCeEEEEEEEC----CCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEE-----E
Confidence 34467899999999999999999853 57799999875542 2335788999999999999999999985 4
Q ss_pred CCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eeecCCCCCCeeecCCCceEE
Q 011508 234 GNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETP--IVHCDLKPSNVLLDGELTAHV 311 (484)
Q Consensus 234 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~dlk~~NIll~~~~~~kl 311 (484)
.....++||||+++|+|.+++.... ....+++..++.++.|++.||+||| +++ |+||||||+||+++.++.+||
T Consensus 105 ~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~i~~qi~~aL~~LH---~~~~~ivH~Dikp~NIll~~~~~~kL 180 (309)
T 3p86_A 105 QPPNLSIVTEYLSRGSLYRLLHKSG-AREQLDERRRLSMAYDVAKGMNYLH---NRNPPIVHRNLKSPNLLVDKKYTVKV 180 (309)
T ss_dssp STTCCEEEEECCTTCBHHHHHHSTT-HHHHSCHHHHHHHHHHHHHHHHHHH---TSSSCCCCTTCCGGGEEECTTCCEEE
T ss_pred ECCceEEEEecCCCCcHHHHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHH---cCCCCEECCCCChhhEEEeCCCcEEE
Confidence 4557899999999999999997432 1123899999999999999999999 888 999999999999999999999
Q ss_pred cccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHH
Q 011508 312 SDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFV 391 (484)
Q Consensus 312 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 391 (484)
+|||+++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... +..
T Consensus 181 ~Dfg~a~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~-----~~~ 248 (309)
T 3p86_A 181 CDFGLSRLKASTF-------LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA-----QVV 248 (309)
T ss_dssp CCCC------------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHH-----HHH
T ss_pred CCCCCCccccccc-------cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHH
Confidence 9999997543221 1123356899999999999999999999999999999999999999753211 111
Q ss_pred HhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHHHH
Q 011508 392 KEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRNKL 470 (484)
Q Consensus 392 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~ 470 (484)
... .. ..... ..+..++.++.+++.+||+.||++|||+.|+++.|+.+.+..
T Consensus 249 ~~~-----~~-~~~~~---------------------~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~ 300 (309)
T 3p86_A 249 AAV-----GF-KCKRL---------------------EIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA 300 (309)
T ss_dssp HHH-----HH-SCCCC---------------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC--
T ss_pred HHH-----Hh-cCCCC---------------------CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhC
Confidence 100 00 00000 002233567899999999999999999999999999887654
No 33
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.4e-45 Score=361.05 Aligned_cols=277 Identities=27% Similarity=0.375 Sum_probs=213.7
Q ss_pred CCCCccCccccccceeEEEEEEc---CCCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFD---HDDHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQG 234 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~---~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 234 (484)
++|++.+.||+|+||.||+|++. +..++..||||+++.... .....+.+|+.++++++||||+++++++. .
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~-----~ 145 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL-----Q 145 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-----S
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEe-----c
Confidence 56889999999999999999965 234567899999975432 33457889999999999999999999853 4
Q ss_pred CceeeEEeecccCCCHHHHHhhcCC---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCC---c
Q 011508 235 NDFEALVYELMVNGSLEEWLHLNRD---APRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGEL---T 308 (484)
Q Consensus 235 ~~~~~lv~e~~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~---~ 308 (484)
....++||||+++|+|.+++..... ....+++.+++.++.||+.||+||| +++|+||||||+|||++.++ .
T Consensus 146 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~ 222 (367)
T 3l9p_A 146 SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRV 222 (367)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCC
T ss_pred CCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEEecCCCCce
Confidence 4577999999999999999986542 2245899999999999999999999 89999999999999998555 5
Q ss_pred eEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccH
Q 011508 309 AHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTL 387 (484)
Q Consensus 309 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~ 387 (484)
+||+|||+++....... ........+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... .+
T Consensus 223 ~kL~DFG~a~~~~~~~~-----~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~--~~ 295 (367)
T 3l9p_A 223 AKIGDFGMARDIYRAGY-----YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--EV 295 (367)
T ss_dssp EEECCCHHHHHHHHHSS-----CTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HH
T ss_pred EEECCCccccccccccc-----cccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HH
Confidence 99999999986533221 112223457899999999988899999999999999999998 99999753211 11
Q ss_pred hHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHH
Q 011508 388 HNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFR 467 (484)
Q Consensus 388 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~ 467 (484)
...+.. .. .. ..+..++..+.+++..||+.||++|||+.||++.|+.+.
T Consensus 296 ~~~i~~-----------~~-~~-------------------~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~ 344 (367)
T 3l9p_A 296 LEFVTS-----------GG-RM-------------------DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT 344 (367)
T ss_dssp HHHHHT-----------TC-CC-------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHc-----------CC-CC-------------------CCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence 111100 00 00 002233567899999999999999999999999999998
Q ss_pred HHHhhccCCCccee
Q 011508 468 NKLVKNVRGQPATY 481 (484)
Q Consensus 468 ~~~~~~~~~~~~~~ 481 (484)
+........-|..|
T Consensus 345 ~~~~~~~~~~p~~~ 358 (367)
T 3l9p_A 345 QDPDVINTALPIEY 358 (367)
T ss_dssp HCHHHHTCCCCCC-
T ss_pred hChhhccCCCcccc
Confidence 77655555545443
No 34
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=3.8e-45 Score=351.84 Aligned_cols=250 Identities=22% Similarity=0.305 Sum_probs=201.2
Q ss_pred hcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCC
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQG 234 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 234 (484)
..++|++.+.||+|+||.||+|+. ..+++.||||++..... ...+.+.+|+++++.++||||+++++++. .
T Consensus 13 ~~~~y~~~~~lG~G~~g~V~~a~~--~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~-----~ 85 (328)
T 3fe3_A 13 HIGNYRLLKTIGKGNFAKVKLARH--ILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIE-----T 85 (328)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEE--TTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-----C
T ss_pred ccCCEEEEEEEeeCCCEEEEEEEE--CCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-----E
Confidence 346899999999999999999984 44678999999975432 23467889999999999999999999853 4
Q ss_pred CceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEccc
Q 011508 235 NDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDF 314 (484)
Q Consensus 235 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 314 (484)
....++||||+++|+|.+++.... .+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+||
T Consensus 86 ~~~~~lv~e~~~~~~L~~~l~~~~----~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DF 158 (328)
T 3fe3_A 86 EKTLYLIMEYASGGEVFDYLVAHG----RMKEKEARSKFRQIVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADF 158 (328)
T ss_dssp SSEEEEEECCCTTCBHHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECST
T ss_pred CCEEEEEEECCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCCHHHEEEcCCCCEEEeec
Confidence 558899999999999999997543 4899999999999999999999 899999999999999999999999999
Q ss_pred CcccccccccccCCCCccccccccccccccCccccCCCCCC-cccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHh
Q 011508 315 GLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVS-TSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKE 393 (484)
Q Consensus 315 g~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~-~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 393 (484)
|++...... .......||+.|+|||++.+..+. .++||||+||++|||++|+.||.... .......
T Consensus 159 G~a~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-----~~~~~~~ 225 (328)
T 3fe3_A 159 GFSNEFTVG--------GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN-----LKELRER 225 (328)
T ss_dssp TCCGGGSSS--------CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHH
T ss_pred cCceecCCC--------CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCC-----HHHHHHH
Confidence 999765322 122345699999999998887764 79999999999999999999997632 1111111
Q ss_pred hcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 394 ALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 394 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
.. ...... +..++.++.+++.+||+.||.+|||++|+++.
T Consensus 226 i~--------~~~~~~---------------------p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 226 VL--------RGKYRI---------------------PFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp HH--------HCCCCC---------------------CTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred HH--------hCCCCC---------------------CCCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 10 000000 11125568899999999999999999999763
No 35
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.7e-45 Score=353.88 Aligned_cols=252 Identities=23% Similarity=0.302 Sum_probs=195.0
Q ss_pred hcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
..++|++.+.||+|+||+||+|+. ..+++.||||++..... ...+.+.+|++++++++||||+++++++ ...
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~--~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~-----~~~ 80 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACH--ILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVL-----ETA 80 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEE--TTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEE-----ECS
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEE--CCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEE-----EeC
Confidence 357899999999999999999984 44678999999976542 2346789999999999999999999985 344
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
+..++||||+++|+|.+++.... .+++..++.++.||+.||+||| +++|+||||||+||++++++.+||+|||
T Consensus 81 ~~~~lv~E~~~gg~L~~~l~~~~----~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~kL~DFG 153 (347)
T 3zgw_A 81 NKIFMVLEYCPGGELFDYIISQD----RLSEEETRVVFRQIVSAVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFG 153 (347)
T ss_dssp SEEEEEEECCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCT
T ss_pred CEEEEEEeCCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCccHHHEEEcCCCCEEEEecc
Confidence 58899999999999999997543 4899999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCCCCC-CcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhh
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEV-STSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEA 394 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 394 (484)
++....... ........||+.|+|||++.+..+ +.++||||+||++|+|++|+.||.... ........
T Consensus 154 ~a~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~-----~~~~~~~i 222 (347)
T 3zgw_A 154 LCAKPKGNK------DYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDN-----VMALYKKI 222 (347)
T ss_dssp TCBC--------------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHH
T ss_pred CcccccCCC------CccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC-----HHHHHHHH
Confidence 987653221 111233569999999999988775 889999999999999999999997531 11111111
Q ss_pred cchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 395 LPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 395 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
. ...... +..++.++.+++.+||+.||++|||++|+++.
T Consensus 223 ~--------~~~~~~---------------------p~~~s~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 223 M--------RGKYDV---------------------PKWLSPSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp H--------HTCCCC---------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred H--------cCCCCC---------------------CCCCCHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 0 000000 11124567899999999999999999999875
No 36
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=2e-44 Score=346.39 Aligned_cols=262 Identities=24% Similarity=0.295 Sum_probs=208.4
Q ss_pred cccHHhHHHhcCC----------CCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCC
Q 011508 148 RVSYQNLFKATDG----------FSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRH 217 (484)
Q Consensus 148 ~~~~~~~~~~~~~----------~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h 217 (484)
.++++++..+++. |...+.||+|+||.||+|+.. .+++.||||++........+.+.+|+.++++++|
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~--~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h 101 (321)
T 2c30_A 24 VVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREK--HSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQH 101 (321)
T ss_dssp -CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEET--TTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCC
T ss_pred cCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEEC--CCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCC
Confidence 4566666655543 666779999999999999854 3578999999987666666789999999999999
Q ss_pred CCceeEeeeeeeeccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCC
Q 011508 218 RNLVKIITSCVSVDFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLK 297 (484)
Q Consensus 218 ~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk 297 (484)
|||+++++++.. ....++||||+++++|.+++.. ..+++..++.++.|++.||+||| +.+|+|||||
T Consensus 102 ~niv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~-----~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlk 168 (321)
T 2c30_A 102 FNVVEMYKSYLV-----GEELWVLMEFLQGGALTDIVSQ-----VRLNEEQIATVCEAVLQALAYLH---AQGVIHRDIK 168 (321)
T ss_dssp TTBCCEEEEEEE-----TTEEEEEECCCCSCBHHHHHTT-----CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCS
T ss_pred CCcceEEEEEEE-----CCEEEEEEecCCCCCHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCC
Confidence 999999998654 3478999999999999999863 34899999999999999999999 8999999999
Q ss_pred CCCeeecCCCceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCC
Q 011508 298 PSNVLLDGELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPT 377 (484)
Q Consensus 298 ~~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~ 377 (484)
|+||+++.++.+||+|||++....... .......||+.|+|||++.+..++.++||||||+++|||++|+.||
T Consensus 169 p~NIll~~~~~~kl~Dfg~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf 241 (321)
T 2c30_A 169 SDSILLTLDGRVKLSDFGFCAQISKDV-------PKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPY 241 (321)
T ss_dssp GGGEEECTTCCEEECCCTTCEECCSSS-------CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred HHHEEECCCCcEEEeeeeeeeecccCc-------cccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence 999999999999999999998664321 1123356999999999999999999999999999999999999999
Q ss_pred CCCccCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHH
Q 011508 378 NEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNME 457 (484)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ 457 (484)
..... ..... .+.....+.+.. ...++..+.+++.+||+.||++|||+.
T Consensus 242 ~~~~~-----~~~~~-----~~~~~~~~~~~~---------------------~~~~~~~l~~li~~~l~~dp~~Rps~~ 290 (321)
T 2c30_A 242 FSDSP-----VQAMK-----RLRDSPPPKLKN---------------------SHKVSPVLRDFLERMLVRDPQERATAQ 290 (321)
T ss_dssp TTSCH-----HHHHH-----HHHHSSCCCCTT---------------------GGGSCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred CCCCH-----HHHHH-----HHhcCCCCCcCc---------------------cccCCHHHHHHHHHHccCChhhCcCHH
Confidence 65311 11111 011111111100 112255788999999999999999999
Q ss_pred HHHHH
Q 011508 458 EVAAQ 462 (484)
Q Consensus 458 evl~~ 462 (484)
|+++.
T Consensus 291 ell~h 295 (321)
T 2c30_A 291 ELLDH 295 (321)
T ss_dssp HHHTS
T ss_pred HHhcC
Confidence 99864
No 37
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=1.7e-44 Score=344.71 Aligned_cols=265 Identities=29% Similarity=0.427 Sum_probs=202.9
Q ss_pred hcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCC
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQG 234 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 234 (484)
..++|.+.+.||+|+||.||+|.+. ..+|+|+++.... ...+.+.+|++++++++||||+++++++.
T Consensus 34 ~~~~~~~~~~lG~G~~g~Vy~~~~~-----~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~------ 102 (307)
T 3lb7_A 34 EASEVMLSTRIGSGSFGTVYKGKWH-----GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT------ 102 (307)
T ss_dssp CTTSCCEEEEEEECSSCEEEEEESS-----SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC------
T ss_pred cccceEEEeEecCCCCeEEEEEEEC-----CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc------
Confidence 3468999999999999999999843 3488888875432 23467899999999999999999999742
Q ss_pred CceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEccc
Q 011508 235 NDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDF 314 (484)
Q Consensus 235 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 314 (484)
.+..++||||+++++|.+++... ...+++.+++.++.|++.||+||| +.+|+||||||+||+++.++.+||+||
T Consensus 103 ~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DF 176 (307)
T 3lb7_A 103 KDNLAIVTQWCEGSSLYKHLHVQ---ETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDF 176 (307)
T ss_dssp SSSCEEEEECCSSCBHHHHHHTS---CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCSSSEEECTTSCEEECCC
T ss_pred cCcEEEEEecCCCCcHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCChhhEEEcCCCCEEEccC
Confidence 23578999999999999999733 345899999999999999999999 889999999999999999999999999
Q ss_pred CcccccccccccCCCCccccccccccccccCccccC---CCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHH
Q 011508 315 GLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGM---GSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFV 391 (484)
Q Consensus 315 g~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 391 (484)
|++........ ........||+.|+|||++. +..++.++|||||||++|||++|+.||........ ....+
T Consensus 177 g~a~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~-~~~~~ 250 (307)
T 3lb7_A 177 GLATVKSRWSG-----SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ-IIFMV 250 (307)
T ss_dssp CSSCC-----------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH-HHHHH
T ss_pred CCceecccccc-----cccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHH-HHHHH
Confidence 99986532211 11222346899999999875 56789999999999999999999999975422111 11111
Q ss_pred HhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHHHHh
Q 011508 392 KEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRNKLV 471 (484)
Q Consensus 392 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~~ 471 (484)
.. ....+.+.. ....|+..+.+++..||+.||++|||+.||++.|+.+...+.
T Consensus 251 ~~-------~~~~~~~~~--------------------~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~p 303 (307)
T 3lb7_A 251 GR-------GYASPDLSK--------------------LYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLP 303 (307)
T ss_dssp HH-------TCCCCCSTT--------------------SCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred hc-------CCCCcchhh--------------------hhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhcc
Confidence 10 000111000 012346678999999999999999999999999999876653
No 38
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=9e-45 Score=351.55 Aligned_cols=295 Identities=26% Similarity=0.340 Sum_probs=207.4
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHH--HHcCCCCCceeEeeeeeeeccCCC
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQA--LRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~--l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
.++|++.+.||+|+||.||+|+.. ++.||||++.... ...+..|.++ +..++||||+++++.+......+.
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~----~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 84 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSLD----ERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGR 84 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEET----TEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSC
T ss_pred hHHhheeeecccCCCeEEEEEEEC----CeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCC
Confidence 467899999999999999999753 6889999997543 2344444444 455899999999987766656666
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC---------CeeecCCCCCCeeecCC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCET---------PIVHCDLKPSNVLLDGE 306 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~---------~ivH~dlk~~NIll~~~ 306 (484)
...++||||+++|+|.+++.... .++..++.++.|++.||+||| +. +|+||||||+|||++.+
T Consensus 85 ~~~~lv~e~~~~g~L~~~l~~~~-----~~~~~~~~i~~qi~~~L~~LH---~~~~~~~~~~~~ivH~Dikp~Nill~~~ 156 (336)
T 3g2f_A 85 MEYLLVMEYYPNGSLXKYLSLHT-----SDWVSSCRLAHSVTRGLAYLH---TELPRGDHYKPAISHRDLNSRNVLVKND 156 (336)
T ss_dssp EEEEEEECCCTTCBHHHHHHHCC-----BCHHHHHHHHHHHHHHHHHHH---CCBCCGGGCBCCEECSSCSGGGEEECTT
T ss_pred ceEEEEEecCCCCcHHHHHhhcc-----cchhHHHHHHHHHHHHHHHHH---hhhccccccccceeecccccceEEEcCC
Confidence 77899999999999999997432 588999999999999999999 77 99999999999999999
Q ss_pred CceEEcccCcccccccccccCC-CCccccccccccccccCccccCC-------CCCCcccceehhhHHHHHHHhCCCCCC
Q 011508 307 LTAHVSDFGLAKFLPEAANNLS-SNQSSSVGVKGTVGYAAPEYGMG-------SEVSTSGDVYSFGILLLEMFTGKGPTN 378 (484)
Q Consensus 307 ~~~kl~Dfg~a~~~~~~~~~~~-~~~~~~~~~~g~~~y~aPE~~~~-------~~~~~~~Dvws~Gvvl~elltg~~p~~ 378 (484)
+.+||+|||++..+........ ..........||..|+|||++.+ ..++.++|||||||++|||++|..||.
T Consensus 157 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~ 236 (336)
T 3g2f_A 157 GTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLF 236 (336)
T ss_dssp SCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGS
T ss_pred CcEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCC
Confidence 9999999999987643321110 11122234569999999999876 456789999999999999999977764
Q ss_pred CCccCCccHhHHHHhhc--c--hhhhhhcC-cccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCC
Q 011508 379 EMFTGNLTLHNFVKEAL--P--ERLAEIVD-PVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRER 453 (484)
Q Consensus 379 ~~~~~~~~~~~~~~~~~--~--~~~~~~~d-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R 453 (484)
...........+..... + ......+. ......... .......++..+.+++.+||+.||++|
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~l~~li~~cl~~dP~~R 303 (336)
T 3g2f_A 237 PGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPE-------------AWKENSLAVRSLKETIEDCWDQDAEAR 303 (336)
T ss_dssp TTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCT-------------TCCCCSHHHHHHHHHHHHHSCSSGGGS
T ss_pred CccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCc-------------ccccccchHHHHHHHHHHHhcCChhhC
Confidence 43221111111110000 0 00111110 000000000 000023357789999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhhccCCCcce
Q 011508 454 MNMEEVAAQLLSFRNKLVKNVRGQPAT 480 (484)
Q Consensus 454 Pt~~evl~~L~~i~~~~~~~~~~~~~~ 480 (484)
||++||++.|+++...+.++....|+.
T Consensus 304 ps~~e~l~~L~~ll~~~~~~~~~~~~~ 330 (336)
T 3g2f_A 304 LTAQXAEERMAELMMIWERNKSVSPTA 330 (336)
T ss_dssp CCHHHHHHHHHHHHHCCCC--------
T ss_pred cchHHHHHHHHHHHHHHHhcccCCCcc
Confidence 999999999999999998887776654
No 39
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.9e-44 Score=338.05 Aligned_cols=257 Identities=28% Similarity=0.426 Sum_probs=206.3
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
.++|++.+.||+|+||.||+|+.. ++..||+|++..... ..+.+.+|++++++++||||+++++++ ..+..
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~ 79 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWL---NKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVC-----LEQAP 79 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET---TTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEE-----CSSSS
T ss_pred hhhceeeheecCCCccEEEEEEec---CCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEE-----ecCCc
Confidence 357889999999999999999965 356799999975433 346799999999999999999999985 34457
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
.++||||+++++|.+++... ...+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||++
T Consensus 80 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~ 153 (269)
T 4hcu_A 80 ICLVFEFMEHGCLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMT 153 (269)
T ss_dssp EEEEEECCTTCBHHHHHHTT---TTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECGGGCEEECCTTGG
T ss_pred eEEEEEeCCCCcHHHHHHhc---CcccCHHHHHHHHHHHHHHHHHHH---hCCeecCCcchheEEEcCCCCEEecccccc
Confidence 89999999999999999743 235899999999999999999999 899999999999999999999999999999
Q ss_pred cccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhhcc
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEALP 396 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 396 (484)
........ .......++..|+|||.+.+..++.++||||+|+++|+|++ |+.||...... ......
T Consensus 154 ~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~-----~~~~~~-- 220 (269)
T 4hcu_A 154 RFVLDDQY------TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS-----EVVEDI-- 220 (269)
T ss_dssp GGBCCHHH------HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHHHHH--
T ss_pred cccccccc------ccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH-----HHHHHH--
Confidence 86643321 11223446788999999988899999999999999999999 99999753211 111110
Q ss_pred hhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHH
Q 011508 397 ERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRN 468 (484)
Q Consensus 397 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~ 468 (484)
....... .+..++..+.+++..||+.||++|||+.|+++.|+++.+
T Consensus 221 ---~~~~~~~-----------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~ 266 (269)
T 4hcu_A 221 ---STGFRLY-----------------------KPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 266 (269)
T ss_dssp ---HTTCCCC-----------------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---hcCccCC-----------------------CCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence 0000000 011225578999999999999999999999999999875
No 40
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=2.9e-44 Score=346.97 Aligned_cols=271 Identities=20% Similarity=0.273 Sum_probs=210.4
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcC-CCCCceeEeeeeeeeccCCCc
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSI-RHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 236 (484)
.++|++.+.||+|+||.||+|+. ..+++.||||++..... .+.+.+|+++++++ +||||+++++++.. +.
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~-----~~ 78 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKN--LYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPC-----GK 78 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEE--TTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEE-----TT
T ss_pred cCCeEEEEEeeccCCceEEEEEE--CCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEec-----CC
Confidence 46799999999999999999984 34678999999875432 34688999999999 99999999998543 45
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCc-----eEE
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELT-----AHV 311 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~-----~kl 311 (484)
..++||||+ +++|.+++... ...+++..++.++.|++.||+||| +.+|+||||||+||+++.++. +||
T Consensus 79 ~~~lv~e~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH---~~~iiHrDlkp~Nill~~~~~~~~~~~kl 151 (330)
T 2izr_A 79 YNAMVLELL-GPSLEDLFDLC---DRTFSLKTVLMIAIQLISRMEYVH---SKNLIYRDVKPENFLIGRPGNKTQQVIHI 151 (330)
T ss_dssp EEEEEEECC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTCTTSEEE
T ss_pred ccEEEEEeC-CCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeeccCCCCCCceEEE
Confidence 789999999 99999999854 246999999999999999999999 889999999999999998887 999
Q ss_pred cccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHH
Q 011508 312 SDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFV 391 (484)
Q Consensus 312 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 391 (484)
+|||+++.+..................||+.|+|||++.+..++.++|||||||++|||++|+.||....... .....
T Consensus 152 ~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~--~~~~~ 229 (330)
T 2izr_A 152 IDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADT--LKERY 229 (330)
T ss_dssp CCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSS--HHHHH
T ss_pred EEcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCcccccccc--HHHHH
Confidence 9999998764432211111112245679999999999999999999999999999999999999998643221 11111
Q ss_pred HhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHHHHh
Q 011508 392 KEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRNKLV 471 (484)
Q Consensus 392 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~~ 471 (484)
............ ..+ ...++ ++.+++..||+.||.+||++.+|.+.|+++.++..
T Consensus 230 ~~i~~~~~~~~~-~~~-----------------------~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~~ 284 (330)
T 2izr_A 230 QKIGDTKRATPI-EVL-----------------------CENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKG 284 (330)
T ss_dssp HHHHHHHHHSCH-HHH-----------------------TTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred HHHHhhhccCCH-HHH-----------------------hccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcC
Confidence 111000000000 000 11124 78999999999999999999999999998877653
No 41
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=6.3e-45 Score=356.85 Aligned_cols=265 Identities=25% Similarity=0.433 Sum_probs=197.7
Q ss_pred cCCCCccCccccccceeEEEEEEcCC-CCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHD-DHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
.++|++.+.||+|+||.||+|+.... ..+..||||+++.... ...+.+.+|+.++++++||||+++++++. ..
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-----~~ 118 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT-----KS 118 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-----SS
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-----eC
Confidence 35789999999999999999986422 3467899999976533 23467899999999999999999999963 34
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
...++||||+++|+|.++++.. ...+++.+++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||
T Consensus 119 ~~~~lv~e~~~~~sL~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 192 (373)
T 2qol_A 119 KPVMIVTEYMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFG 192 (373)
T ss_dssp SSCEEEEECCTTCBHHHHHHTT---TTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC-
T ss_pred CceEEEEeCCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEEcCCCCEEECcCc
Confidence 5789999999999999999743 345899999999999999999999 8899999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhh
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEA 394 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~ 394 (484)
+++........ ........++..|+|||++.+..++.++|||||||++|||++ |+.||...... +...
T Consensus 193 ~a~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~-----~~~~-- 261 (373)
T 2qol_A 193 LGRVLEDDPEA----AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ-----DVIK-- 261 (373)
T ss_dssp -------------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH-----HHHH--
T ss_pred cccccccCCcc----ceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHH--
Confidence 99876433211 111122335778999999988899999999999999999998 99999653211 1111
Q ss_pred cchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHHHH
Q 011508 395 LPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRNKL 470 (484)
Q Consensus 395 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~ 470 (484)
.++..... ..+..++..+.+++..||+.||++||++.||++.|+.+....
T Consensus 262 -------~i~~~~~~-------------------~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~ 311 (373)
T 2qol_A 262 -------AVDEGYRL-------------------PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311 (373)
T ss_dssp -------HHHTTEEC-------------------CCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCG
T ss_pred -------HHHcCCCC-------------------CCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCc
Confidence 00000000 001233667899999999999999999999999999987653
No 42
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=2e-45 Score=361.43 Aligned_cols=262 Identities=27% Similarity=0.408 Sum_probs=207.4
Q ss_pred hcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
..++|.+.+.||+|+||.||+|++.. +++.||||+++.... ...+.+.+|++++++++||||++++++|. .+
T Consensus 112 ~~~~~~~~~~lG~G~~g~V~~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~-----~~ 184 (377)
T 3cbl_A 112 NHEDLVLGEQIGRGNFGEVFSGRLRA--DNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCT-----QK 184 (377)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETT--TCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEEC-----SS
T ss_pred chHHeEEeeEeccCCCCeEEEEEEec--CCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe-----cC
Confidence 44678899999999999999999643 568899999875432 22346889999999999999999999963 34
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
...++||||+++|+|.+++.... ..+++..++.++.|++.||+||| +++|+||||||+|||++.++.+||+|||
T Consensus 185 ~~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nil~~~~~~~kl~DfG 258 (377)
T 3cbl_A 185 QPIYIVMELVQGGDFLTFLRTEG---ARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFG 258 (377)
T ss_dssp SSCEEEEECCTTCBHHHHHHHHG---GGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGG
T ss_pred CCcEEEEEcCCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---HCCcCCcccCHHHEEEcCCCcEEECcCC
Confidence 57899999999999999997532 34899999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhh
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEA 394 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~ 394 (484)
+++........ .......++..|+|||.+.+..++.++|||||||++|||+| |..||...... .....+...
T Consensus 259 ~s~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~--~~~~~~~~~ 331 (377)
T 3cbl_A 259 MSREEADGVYA-----ASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ--QTREFVEKG 331 (377)
T ss_dssp GCEECTTSEEE-----CCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH--HHHHHHHTT
T ss_pred CceecCCCcee-----ecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcC
Confidence 99864322111 00111235778999999988889999999999999999998 99999763211 111111100
Q ss_pred cchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHHH
Q 011508 395 LPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRNK 469 (484)
Q Consensus 395 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~ 469 (484)
. .+ ..+..|+.++.+++..||+.||++|||++||++.|+.++++
T Consensus 332 --------~--~~---------------------~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~ 375 (377)
T 3cbl_A 332 --------G--RL---------------------PCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375 (377)
T ss_dssp --------C--CC---------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --------C--CC---------------------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence 0 00 00233466789999999999999999999999999999765
No 43
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=3.4e-44 Score=340.63 Aligned_cols=261 Identities=25% Similarity=0.379 Sum_probs=201.9
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCcc---chHHHHHHHHHHHcCCCCCceeEeeeeeeeccCC
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRG---ASKSFIAECQALRSIRHRNLVKIITSCVSVDFQG 234 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 234 (484)
.++|++.+.||+|+||.||+|+. ..++..||+|++...... ..+.+.+|+.++++++||||+++++++ ..
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~--~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~-----~~ 82 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAED--TILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVD-----EE 82 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEE--TTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEE-----EC
T ss_pred hccEEEEEEEccCCCEEEEEEEE--CCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEee-----ee
Confidence 46799999999999999999984 446788999998654332 235788999999999999999999985 34
Q ss_pred CceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEccc
Q 011508 235 NDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDF 314 (484)
Q Consensus 235 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 314 (484)
++..++||||+++++|.+++.... .+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+||
T Consensus 83 ~~~~~lv~e~~~g~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Df 155 (294)
T 4eqm_A 83 DDCYYLVMEYIEGPTLSEYIESHG----PLSVDTAINFTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDF 155 (294)
T ss_dssp SSEEEEEEECCCSCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCC
T ss_pred CCeEEEEEeCCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEEeC
Confidence 558899999999999999997543 4899999999999999999999 899999999999999999999999999
Q ss_pred CcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhh
Q 011508 315 GLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEA 394 (484)
Q Consensus 315 g~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 394 (484)
|++....... ........||+.|+|||.+.+..++.++||||||+++|||+||+.||....... .....
T Consensus 156 g~~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~-----~~~~~ 224 (294)
T 4eqm_A 156 GIAKALSETS------LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVS-----IAIKH 224 (294)
T ss_dssp SSSTTC-------------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHH-----HHHHH
T ss_pred CCcccccccc------ccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH-----HHHHH
Confidence 9998764322 111223468999999999999999999999999999999999999997632111 00000
Q ss_pred cchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCC-CHHHHHHHHHHHH
Q 011508 395 LPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERM-NMEEVAAQLLSFR 467 (484)
Q Consensus 395 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-t~~evl~~L~~i~ 467 (484)
.... .. .... ....+++..+.+++.+||+.||++|| +++++.+.|+.+.
T Consensus 225 ~~~~----~~-~~~~-------------------~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~ 274 (294)
T 4eqm_A 225 IQDS----VP-NVTT-------------------DVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVL 274 (294)
T ss_dssp HSSC----CC-CHHH-------------------HSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSS
T ss_pred hhcc----CC-Ccch-------------------hcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHH
Confidence 0000 00 0000 00122356789999999999999999 8999988887654
No 44
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=3.4e-44 Score=346.14 Aligned_cols=249 Identities=22% Similarity=0.287 Sum_probs=201.1
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeecc---CccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQ---HRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
++|++.+.||+|+||.||+|+. ..+++.||+|+++.. .......+.+|+.+++.++||||+++++++ ...
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~--~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~-----~~~ 77 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVRE--KATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAF-----QTH 77 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEE--TTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEE-----ECS
T ss_pred HHeEEEEEEecCCCeEEEEEEE--CCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEE-----EeC
Confidence 5789999999999999999984 446789999999754 233456788999999999999999999985 445
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
+..++||||+++|+|.+++.... .+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||
T Consensus 78 ~~~~lv~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG 150 (337)
T 1o6l_A 78 DRLCFVMEYANGGELFFHLSRER----VFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFG 150 (337)
T ss_dssp SEEEEEEECCTTCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCT
T ss_pred CEEEEEEeCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCCHHHEEECCCCCEEEeecc
Confidence 58899999999999999997543 4899999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhc
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEAL 395 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 395 (484)
+++..... ........||+.|+|||++.+..++.++|||||||++|||++|+.||..... .......
T Consensus 151 ~a~~~~~~-------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-----~~~~~~i- 217 (337)
T 1o6l_A 151 LCKEGISD-------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-----ERLFELI- 217 (337)
T ss_dssp TCBCSCCT-------TCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHH-
T ss_pred chhhcccC-------CCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCH-----HHHHHHH-
Confidence 99854221 1122345799999999999999999999999999999999999999975311 1111111
Q ss_pred chhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCC-----CHHHHHHH
Q 011508 396 PERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERM-----NMEEVAAQ 462 (484)
Q Consensus 396 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~ 462 (484)
....+.. +..++.++.+++.+||+.||++|| +++|+++.
T Consensus 218 -------~~~~~~~---------------------p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 218 -------LMEEIRF---------------------PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp -------HHCCCCC---------------------CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred -------HcCCCCC---------------------CCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 0000000 112255788999999999999999 89998764
No 45
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=3.9e-44 Score=348.86 Aligned_cols=252 Identities=21% Similarity=0.271 Sum_probs=201.4
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCcc------chHHHHHHHHHHHcCCCCCceeEeeeeeeec
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRG------ASKSFIAECQALRSIRHRNLVKIITSCVSVD 231 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 231 (484)
.+.|.+.+.||+|+||.||+|+. ..++..||+|+++..... ..+.+.+|+.++++++||||+++++++
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~--~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~---- 84 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCRE--KSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVY---- 84 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEE--TTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEE----
T ss_pred hhceEEeeEEeeCcCEEEEEEEE--CCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEE----
Confidence 46799999999999999999994 446789999999765422 246789999999999999999999985
Q ss_pred cCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCC----
Q 011508 232 FQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGEL---- 307 (484)
Q Consensus 232 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~---- 307 (484)
......++||||+++|+|.+++.. ...+++..+..++.||+.||+||| +++|+||||||+||+++.++
T Consensus 85 -~~~~~~~lv~e~~~gg~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~~ 156 (361)
T 2yab_A 85 -ENRTDVVLILELVSGGELFDFLAQ----KESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIP 156 (361)
T ss_dssp -ECSSEEEEEEECCCSCBHHHHHTT----CSCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSC
T ss_pred -EeCCEEEEEEEcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeCCCCCcc
Confidence 445588999999999999999963 235899999999999999999999 89999999999999998776
Q ss_pred ceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccH
Q 011508 308 TAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTL 387 (484)
Q Consensus 308 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~ 387 (484)
.+||+|||++....... ......||+.|+|||++.+..++.++|||||||++|+|++|..||......
T Consensus 157 ~vkl~DFG~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~---- 224 (361)
T 2yab_A 157 HIKLIDFGLAHEIEDGV--------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ---- 224 (361)
T ss_dssp CEEECCCSSCEECCTTC--------CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH----
T ss_pred CEEEEecCCceEcCCCC--------ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH----
Confidence 79999999998764321 122356999999999999989999999999999999999999999753211
Q ss_pred hHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 388 HNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 388 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
.... .+.......... ....++..+.+++..||..||++|||+.|+++
T Consensus 225 -~~~~--------~i~~~~~~~~~~-----------------~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 225 -ETLA--------NITAVSYDFDEE-----------------FFSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp -HHHH--------HHHTTCCCCCHH-----------------HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -HHHH--------HHHhcCCCCCch-----------------hccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 1111 111100000000 01122557889999999999999999999985
No 46
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1e-44 Score=354.91 Aligned_cols=277 Identities=25% Similarity=0.407 Sum_probs=204.1
Q ss_pred CCCccCccccccceeEEEEEEcCC-CCeeEEEEEEeeccC-ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHD-DHETLVAVKVLNLQH-RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
.|.+.+.||+|+||.||+|++... .....||+|.++... ....+.+.+|+.++++++||||++++++|. ..+..
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~----~~~~~ 165 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICL----RSEGS 165 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEEC----CCSSC
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEE----cCCCC
Confidence 466778999999999999987533 234679999987543 234568999999999999999999999863 34457
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
.++||||+++|+|.+++... ...+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||++
T Consensus 166 ~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DFG~a 239 (373)
T 3c1x_A 166 PLVVLPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLA 239 (373)
T ss_dssp CEEEEECCTTCBHHHHHHCT---TCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC---
T ss_pred eEEEEECCCCCCHHHHHhhc---ccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCccchheEEECCCCCEEEeecccc
Confidence 78999999999999999743 345889999999999999999999 899999999999999999999999999999
Q ss_pred cccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhhcc
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEALP 396 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 396 (484)
+........ .........++..|+|||.+.+..++.++|||||||++|||+| |.+||....... ....+....
T Consensus 240 ~~~~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~--~~~~~~~~~- 313 (373)
T 3c1x_A 240 RDMYDKEFD---SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD--ITVYLLQGR- 313 (373)
T ss_dssp ---------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC--HHHHHHTTC-
T ss_pred ccccccccc---cccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH--HHHHHHcCC-
Confidence 866432211 1111223457889999999988899999999999999999999 677776532221 111111000
Q ss_pred hhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHHHHhhccCC
Q 011508 397 ERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRNKLVKNVRG 476 (484)
Q Consensus 397 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~~~~~~~ 476 (484)
.. ..+..++..+.+++..||+.||++|||+.|+++.|+.+...+......
T Consensus 314 ---------~~---------------------~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~~~~~ 363 (373)
T 3c1x_A 314 ---------RL---------------------LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYV 363 (373)
T ss_dssp ---------CC---------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSCCBC
T ss_pred ---------CC---------------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcccccee
Confidence 00 002234667899999999999999999999999999998877544433
Q ss_pred -Ccceee
Q 011508 477 -QPATYV 482 (484)
Q Consensus 477 -~~~~~~ 482 (484)
-+++|+
T Consensus 364 ~~~~~~~ 370 (373)
T 3c1x_A 364 HVNATYV 370 (373)
T ss_dssp CCCTTTT
T ss_pred eccceeE
Confidence 244554
No 47
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=3.8e-44 Score=360.17 Aligned_cols=255 Identities=30% Similarity=0.402 Sum_probs=206.7
Q ss_pred hcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCc
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
..++|++.+.||+|+||.||+|.+. ++.||||+++... ..+.+.+|++++++++||||+++++++. ..+.
T Consensus 191 ~~~~~~~~~~lG~G~fg~V~~~~~~----~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~----~~~~ 260 (450)
T 1k9a_A 191 NMKELKLLQTIGKGEFGDVMLGDYR----GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIV----EEKG 260 (450)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEET----TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEE----CTTS
T ss_pred ChHHeEEEeeecCcCCeeEEEEEec----CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEE----cCCC
Confidence 4467889999999999999999864 5689999997543 4578999999999999999999999874 3334
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCc
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGL 316 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 316 (484)
..++||||+++|+|.+++.... ...+++..++.++.|++.||+||| +++|+||||||+|||++.++.+||+|||+
T Consensus 261 ~~~iv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~ 335 (450)
T 1k9a_A 261 GLYIVTEYMAKGSLVDYLRSRG--RSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGL 335 (450)
T ss_dssp CEEEEEECCTTCBHHHHHHHHC--TTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred ceEEEEEecCCCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEECCCCCEEEeeCCC
Confidence 6899999999999999998653 234789999999999999999999 89999999999999999999999999999
Q ss_pred ccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhhc
Q 011508 317 AKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEAL 395 (484)
Q Consensus 317 a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 395 (484)
++...... ....++..|+|||.+.+..++.++|||||||++|||+| |+.||....... ....+...
T Consensus 336 a~~~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~--~~~~i~~~- 402 (450)
T 1k9a_A 336 TKEASSTQ----------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--VVPRVEKG- 402 (450)
T ss_dssp CEECC----------------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT--HHHHHHTT-
T ss_pred cccccccc----------cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcC-
Confidence 98542211 11246889999999999999999999999999999998 999997643221 11111100
Q ss_pred chhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHHH
Q 011508 396 PERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRNK 469 (484)
Q Consensus 396 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~ 469 (484)
.. + ..+..|+..+.+++..||+.||++|||+.|+++.|+.++..
T Consensus 403 -------~~--~---------------------~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 403 -------YK--M---------------------DAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp -------CC--C---------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred -------CC--C---------------------CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 00 0 01234567899999999999999999999999999998754
No 48
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=6e-44 Score=337.88 Aligned_cols=253 Identities=27% Similarity=0.439 Sum_probs=199.7
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccc-------hHHHHHHHHHHHcCCCCCceeEeeeeeee
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGA-------SKSFIAECQALRSIRHRNLVKIITSCVSV 230 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~-------~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 230 (484)
.++|++.+.||+|+||.||+|+.. .+++.||+|++....... .+.+.+|+.++++++||||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-- 93 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLV--KDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMH-- 93 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEET--TTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEET--
T ss_pred hccceehhccccCCceeEEEEEEc--CCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeec--
Confidence 467899999999999999999954 357889999986543322 167889999999999999999999852
Q ss_pred ccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eeecCCCCCCeeecCCCc
Q 011508 231 DFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETP--IVHCDLKPSNVLLDGELT 308 (484)
Q Consensus 231 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~dlk~~NIll~~~~~ 308 (484)
+. .++||||+++|+|.+++... ...+++..++.++.|++.||+||| +++ |+||||||+||+++.++.
T Consensus 94 ---~~--~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~l~~~l~~lH---~~~~~ivH~dikp~Nil~~~~~~ 162 (287)
T 4f0f_A 94 ---NP--PRMVMEFVPCGDLYHRLLDK---AHPIKWSVKLRLMLDIALGIEYMQ---NQNPPIVHRDLRSPNIFLQSLDE 162 (287)
T ss_dssp ---TT--TEEEEECCTTCBHHHHHHCT---TSCCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCSCCSGGGEEESCCCT
T ss_pred ---CC--CeEEEEecCCCCHHHHHhcc---cCCccHHHHHHHHHHHHHHHHHHH---hCCCCeecCCCCcceEEEeccCC
Confidence 22 26999999999999988632 346899999999999999999999 888 999999999999988776
Q ss_pred -----eEEcccCcccccccccccCCCCccccccccccccccCccccC--CCCCCcccceehhhHHHHHHHhCCCCCCCCc
Q 011508 309 -----AHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGM--GSEVSTSGDVYSFGILLLEMFTGKGPTNEMF 381 (484)
Q Consensus 309 -----~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~--~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~ 381 (484)
+||+|||+++.... ......||+.|+|||.+. ...++.++|||||||++|||++|+.||....
T Consensus 163 ~~~~~~kl~Dfg~~~~~~~----------~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~ 232 (287)
T 4f0f_A 163 NAPVCAKVADFGLSQQSVH----------SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYS 232 (287)
T ss_dssp TCSCCEEECCCTTCBCCSS----------CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred CCceeEEeCCCCccccccc----------cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCcccc
Confidence 99999999875422 122346899999999983 4567899999999999999999999997643
Q ss_pred cCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 382 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
............. -..+. .+..++..+.+++..||+.||++|||++|+++
T Consensus 233 ~~~~~~~~~~~~~-------~~~~~-----------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 282 (287)
T 4f0f_A 233 YGKIKFINMIREE-------GLRPT-----------------------IPEDCPPRLRNVIELCWSGDPKKRPHFSYIVK 282 (287)
T ss_dssp CCHHHHHHHHHHS-------CCCCC-----------------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ccHHHHHHHHhcc-------CCCCC-----------------------CCcccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 3221111111100 00000 02233667899999999999999999999999
Q ss_pred HHHH
Q 011508 462 QLLS 465 (484)
Q Consensus 462 ~L~~ 465 (484)
.|++
T Consensus 283 ~L~~ 286 (287)
T 4f0f_A 283 ELSE 286 (287)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 9975
No 49
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=9.4e-44 Score=338.37 Aligned_cols=272 Identities=18% Similarity=0.232 Sum_probs=212.1
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcC-CCCCceeEeeeeeeeccCCCc
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSI-RHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 236 (484)
.++|++.+.||+|+||.||+|+. ..+++.||+|++.... ..+.+.+|+.+++++ +|+|++++++++. ...
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~-----~~~ 79 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTN--LLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQ-----EGL 79 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEE--TTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEE-----ETT
T ss_pred ccceEEEEEEeecCCEEEEEEEE--CCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecC-----CCc
Confidence 46799999999999999999984 3467899999986443 335688899999999 8999999999853 345
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCc-----eEE
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELT-----AHV 311 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~-----~kl 311 (484)
..++||||+ +++|.+++... ...+++..++.++.|++.||+||| +++|+||||||+||+++.++. +||
T Consensus 80 ~~~lv~e~~-~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl 152 (298)
T 1csn_A 80 HNVLVIDLL-GPSLEDLLDLC---GRKFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYV 152 (298)
T ss_dssp EEEEEEECC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEE
T ss_pred eeEEEEEec-CCCHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEeccCCCCCCCeEEE
Confidence 889999999 99999999754 235899999999999999999999 999999999999999987775 999
Q ss_pred cccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCcc--HhH
Q 011508 312 SDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLT--LHN 389 (484)
Q Consensus 312 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~--~~~ 389 (484)
+|||++.....................||+.|+|||++.+..++.++||||||+++|||++|+.||......... +..
T Consensus 153 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~ 232 (298)
T 1csn_A 153 VDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYER 232 (298)
T ss_dssp CCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHH
T ss_pred EECccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHH
Confidence 999999877543321111112234567999999999999999999999999999999999999999764322110 000
Q ss_pred HHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHHH
Q 011508 390 FVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRNK 469 (484)
Q Consensus 390 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~ 469 (484)
......+...... ...++.++.+++..||+.||++|||+++|++.|+++.++
T Consensus 233 ~~~~~~~~~~~~~----------------------------~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~ 284 (298)
T 1csn_A 233 IGEKKQSTPLREL----------------------------CAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLER 284 (298)
T ss_dssp HHHHHHHSCHHHH----------------------------TTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred HHhhccCccHHHH----------------------------HhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHh
Confidence 0000000000000 112356789999999999999999999999999999887
Q ss_pred Hhhc
Q 011508 470 LVKN 473 (484)
Q Consensus 470 ~~~~ 473 (484)
....
T Consensus 285 ~~~~ 288 (298)
T 1csn_A 285 LNTT 288 (298)
T ss_dssp TTCC
T ss_pred cCCC
Confidence 6443
No 50
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-44 Score=351.73 Aligned_cols=270 Identities=25% Similarity=0.400 Sum_probs=211.1
Q ss_pred HhcCCCCccCccccccceeEEEEEEcCC---CCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeec
Q 011508 156 KATDGFSLENLIGAGSFGSVYKGIFDHD---DHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVD 231 (484)
Q Consensus 156 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~---~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 231 (484)
...++|++.+.||+|+||.||+|+.... .+++.||+|+++.... ...+.+.+|+.++++++||||+++++++.
T Consensus 44 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--- 120 (343)
T 1luf_A 44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCA--- 120 (343)
T ss_dssp CCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC---
T ss_pred ecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc---
Confidence 3457899999999999999999997532 3568999999976543 23467899999999999999999999953
Q ss_pred cCCCceeeEEeecccCCCHHHHHhhcCCC--------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCe
Q 011508 232 FQGNDFEALVYELMVNGSLEEWLHLNRDA--------------------PRNLNLLQRLSIAVDVASTLEYLHHYCETPI 291 (484)
Q Consensus 232 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~--------------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i 291 (484)
.++..++||||+++|+|.+++...... ...+++.+++.++.||+.||+||| +++|
T Consensus 121 --~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH---~~~i 195 (343)
T 1luf_A 121 --VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKF 195 (343)
T ss_dssp --SSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH---HTTC
T ss_pred --cCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCe
Confidence 455789999999999999999864321 256899999999999999999999 8999
Q ss_pred eecCCCCCCeeecCCCceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHH
Q 011508 292 VHCDLKPSNVLLDGELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMF 371 (484)
Q Consensus 292 vH~dlk~~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ell 371 (484)
+||||||+||+++.++.+||+|||++........ ........+|+.|+|||++.+..++.++||||||+++|||+
T Consensus 196 vH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~-----~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~ 270 (343)
T 1luf_A 196 VHRDLATRNCLVGENMVVKIADFGLSRNIYSADY-----YKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIF 270 (343)
T ss_dssp CCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGC-----BC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred ecCCCCcceEEECCCCeEEEeecCCCcccccCcc-----ccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHH
Confidence 9999999999999999999999999986643221 11122345789999999998888999999999999999999
Q ss_pred h-CCCCCCCCccCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCc
Q 011508 372 T-GKGPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELP 450 (484)
Q Consensus 372 t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP 450 (484)
| |+.||..... .+.... +.+..... .+..++..+.+++..||+.||
T Consensus 271 t~g~~p~~~~~~-----~~~~~~--------~~~~~~~~--------------------~~~~~~~~l~~li~~~l~~~p 317 (343)
T 1luf_A 271 SYGLQPYYGMAH-----EEVIYY--------VRDGNILA--------------------CPENCPLELYNLMRLCWSKLP 317 (343)
T ss_dssp TTTCCTTTTSCH-----HHHHHH--------HHTTCCCC--------------------CCTTCCHHHHHHHHHHTCSSG
T ss_pred hcCCCcCCCCCh-----HHHHHH--------HhCCCcCC--------------------CCCCCCHHHHHHHHHHcccCc
Confidence 9 9999975321 111110 11100000 012335678999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHh
Q 011508 451 RERMNMEEVAAQLLSFRNKLV 471 (484)
Q Consensus 451 ~~RPt~~evl~~L~~i~~~~~ 471 (484)
++|||+.||++.|+++.+++.
T Consensus 318 ~~Rps~~~~~~~L~~~~~~~~ 338 (343)
T 1luf_A 318 ADRPSFCSIHRILQRMCERAE 338 (343)
T ss_dssp GGSCCHHHHHHHHHHTTC---
T ss_pred ccCCCHHHHHHHHHHHHhhhh
Confidence 999999999999999876654
No 51
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=1.6e-44 Score=347.34 Aligned_cols=255 Identities=23% Similarity=0.316 Sum_probs=200.0
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCc
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
.++|++.+.||+|+||.||+|+.. .+++.||+|++..... ...+.+.+|+.+++.++||||+++++++. .+.
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~-----~~~ 78 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNR--VTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRR-----EGN 78 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEET--TTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEE-----CSS
T ss_pred hhhceeeeEEecCCCEEEEEEEEC--CCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEe-----cCC
Confidence 368999999999999999999844 4578899999875433 22356889999999999999999999854 445
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCc
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGL 316 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 316 (484)
..++||||+++|+|.+++.. ...+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||+
T Consensus 79 ~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~Dfg~ 151 (323)
T 3tki_A 79 IQYLFLEYCSGGELFDRIEP----DIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGL 151 (323)
T ss_dssp EEEEEEECCTTEEGGGGSBT----TTBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred eEEEEEEcCCCCcHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccccchHHEEEeCCCCEEEEEeec
Confidence 88999999999999999863 335899999999999999999999 89999999999999999999999999999
Q ss_pred ccccccccccCCCCccccccccccccccCccccCCCCC-CcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhc
Q 011508 317 AKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEV-STSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEAL 395 (484)
Q Consensus 317 a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 395 (484)
+..+..... ........||+.|+|||++.+..+ +.++|||||||++|||++|+.||............+.....
T Consensus 152 a~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~ 226 (323)
T 3tki_A 152 ATVFRYNNR-----ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 226 (323)
T ss_dssp CEECEETTE-----ECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCT
T ss_pred cceeccCCc-----ccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccc
Confidence 986643221 111224569999999999887765 78999999999999999999999764333222222211100
Q ss_pred chhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 396 PERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 396 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
. .. ....+...+.+++.+||+.||++|||+.|+++.
T Consensus 227 ~------~~-------------------------~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 227 Y------LN-------------------------PWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp T------ST-------------------------TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred c------CC-------------------------ccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 0 00 012235568899999999999999999999764
No 52
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1e-43 Score=341.52 Aligned_cols=284 Identities=19% Similarity=0.242 Sum_probs=210.0
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC-ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCc
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH-RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
.++|.+.+.||+|+||.||+|+.. .+++.||||+++... ....+.+.+|++++++++||||+++++++.. ....
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---~~~~ 82 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHK--KTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEE---TTTR 82 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEET--TTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEEC---TTTC
T ss_pred CCCEEEEEEecCCCCeEEEEEEEC--CCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeec---CCCc
Confidence 357899999999999999999954 357899999997543 2345678899999999999999999998642 2344
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeee----cCCCceEEc
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLL----DGELTAHVS 312 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll----~~~~~~kl~ 312 (484)
..++||||+++++|.+++..... ...+++..++.++.|++.||+||| +++|+||||||+||++ +.++.+||+
T Consensus 83 ~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~ 158 (319)
T 4euu_A 83 HKVLIMEFCPCGSLYTVLEEPSN-AYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLT 158 (319)
T ss_dssp CEEEEEECCTTCBHHHHHHSGGG-TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEECTTSCEEEEEC
T ss_pred eEEEEEeCCCCCCHHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEeccCCCCceEEEc
Confidence 77999999999999999985432 234899999999999999999999 8999999999999999 778889999
Q ss_pred ccCcccccccccccCCCCccccccccccccccCccccC--------CCCCCcccceehhhHHHHHHHhCCCCCCCCccCC
Q 011508 313 DFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGM--------GSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGN 384 (484)
Q Consensus 313 Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~--------~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~ 384 (484)
|||+++...... ......||..|+|||++. +..++.++|||||||++|||++|+.||.......
T Consensus 159 Dfg~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~ 230 (319)
T 4euu_A 159 DFGAARELEDDE--------QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPR 230 (319)
T ss_dssp CCTTCEECCTTC--------CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGG
T ss_pred cCCCceecCCCC--------ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccc
Confidence 999998764322 122346899999999875 5778999999999999999999999997543222
Q ss_pred ccH---hHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 385 LTL---HNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 385 ~~~---~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
... ........+..+..+.+..-.. .. .... ..............+.+++..||+.||++|||++|+++
T Consensus 231 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~--~~~~-----~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~ 302 (319)
T 4euu_A 231 RNKEVMYKIITGKPSGAISGVQKAENGP-ID--WSGD-----MPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFA 302 (319)
T ss_dssp GCHHHHHHHHHHCCTTCCEEEECSTTCC-EE--EESS-----CCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHH
T ss_pred hhHHHHHHHhcCCCcccchhhhcccCCc-cc--cCcc-----CCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhh
Confidence 111 1111111111111111000000 00 0000 00011123556788999999999999999999999999
Q ss_pred HHHHH
Q 011508 462 QLLSF 466 (484)
Q Consensus 462 ~L~~i 466 (484)
...+.
T Consensus 303 h~~d~ 307 (319)
T 4euu_A 303 ETSDI 307 (319)
T ss_dssp HHHHH
T ss_pred ccHHH
Confidence 88754
No 53
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=1.2e-44 Score=347.82 Aligned_cols=278 Identities=27% Similarity=0.352 Sum_probs=210.6
Q ss_pred CCccCccccccceeEEEEEEc--CCCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 161 FSLENLIGAGSFGSVYKGIFD--HDDHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 161 ~~~~~~lg~G~~g~Vy~~~~~--~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
|++.+.||+|+||.||++.+. +..+++.||||+++.... ...+.+.+|++++++++||||+++++++.. .+...
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---~~~~~ 109 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCED---AGAAS 109 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE---TTTTE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEec---CCCce
Confidence 488899999999999998763 334678999999986543 234678999999999999999999998753 22457
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
.++||||+++|+|.+++... .+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 110 ~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~i~~~l~~~l~~LH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a 181 (318)
T 3lxp_A 110 LQLVMEYVPLGSLRDYLPRH-----SIGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLA 181 (318)
T ss_dssp EEEEECCCTTCBHHHHGGGS-----CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGC
T ss_pred EEEEEecccCCcHHHHHhhC-----CCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEEcCCCCEEECCcccc
Confidence 89999999999999999743 3899999999999999999999 899999999999999999999999999999
Q ss_pred cccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcc-
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALP- 396 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~- 396 (484)
......... ........++..|+|||++.+..++.++||||||+++|||+||+.||............+......
T Consensus 182 ~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~ 257 (318)
T 3lxp_A 182 KAVPEGHEY----YRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTV 257 (318)
T ss_dssp EECCTTCSE----EEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHH
T ss_pred ccccccccc----cccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhH
Confidence 876432211 111223457888999999988889999999999999999999999986531110000000000000
Q ss_pred hhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHHHHhh
Q 011508 397 ERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRNKLVK 472 (484)
Q Consensus 397 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~~~ 472 (484)
..+.+.++.... ...+..++.++.+++..||+.||++|||+.|+++.|+.+.+++..
T Consensus 258 ~~~~~~~~~~~~-------------------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~ 314 (318)
T 3lxp_A 258 LRLTELLERGER-------------------LPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQG 314 (318)
T ss_dssp HHHHHHHHTTCC-------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhcccC-------------------CCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhcc
Confidence 001111111100 001233467899999999999999999999999999999988754
No 54
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=8.5e-45 Score=340.17 Aligned_cols=259 Identities=29% Similarity=0.443 Sum_probs=206.6
Q ss_pred hcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCc
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
..++|++.+.||+|+||.||+|... ++..||+|+++.... ..+.+.+|++++.+++||||+++++++ ..+.
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~ 76 (268)
T 3sxs_A 6 KREEITLLKELGSGQFGVVKLGKWK---GQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVC-----SKEY 76 (268)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEET---TTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEE-----CSSS
T ss_pred chhheeeeeeeccCCCceEEEEEec---CceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEE-----ccCC
Confidence 3467899999999999999999865 456799999975443 346789999999999999999999985 4455
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCc
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGL 316 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 316 (484)
..++||||+++++|.+++.... ..+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||.
T Consensus 77 ~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~ 150 (268)
T 3sxs_A 77 PIYIVTEYISNGCLLNYLRSHG---KGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGM 150 (268)
T ss_dssp SEEEEEECCTTCBHHHHHHHHG---GGCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCSGGGEEECTTCCEEECCTTC
T ss_pred ceEEEEEccCCCcHHHHHHHcC---CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCcceEEECCCCCEEEccCcc
Confidence 7899999999999999997542 35899999999999999999999 89999999999999999999999999999
Q ss_pred ccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhhc
Q 011508 317 AKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEAL 395 (484)
Q Consensus 317 a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 395 (484)
+....... ........++..|+|||.+.+..++.++||||||+++|||++ |+.||...... .....
T Consensus 151 ~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~~~~~-- 217 (268)
T 3sxs_A 151 TRYVLDDQ------YVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS-----EVVLK-- 217 (268)
T ss_dssp EEECCTTC------EEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHH-----HHHHH--
T ss_pred ceecchhh------hhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChH-----HHHHH--
Confidence 98664322 111223446788999999988889999999999999999999 99999653211 11100
Q ss_pred chhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHHH
Q 011508 396 PERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRNK 469 (484)
Q Consensus 396 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~ 469 (484)
+...... ..+..++..+.+++..||+.||++|||+.|+++.|+.++++
T Consensus 218 ------~~~~~~~--------------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 218 ------VSQGHRL--------------------YRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp ------HHTTCCC--------------------CCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred ------HHcCCCC--------------------CCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 0000000 00112245788999999999999999999999999988654
No 55
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6e-44 Score=342.87 Aligned_cols=253 Identities=20% Similarity=0.282 Sum_probs=201.8
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
.++|++.+.||+|+||.||+|+. ..++..||+|.+.... .....+.+|+.+++.++||||+++++++. +.+.
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~--~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~-----~~~~ 75 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVE--TSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFE-----SMEE 75 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEE--TTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEE-----ETTE
T ss_pred hhceEeeeEEecCCCeEEEEEEE--CCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEe-----cCCE
Confidence 46899999999999999999994 4467899999987543 34467889999999999999999999864 3458
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecC--CCceEEcccC
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDG--ELTAHVSDFG 315 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~--~~~~kl~Dfg 315 (484)
.++||||+++|+|.+++... ...+++.+++.++.|++.||+||| +++|+||||||+||+++. ++.+||+|||
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH---~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg 149 (321)
T 1tki_A 76 LVMIFEFISGLDIFERINTS---AFELNEREIVSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFG 149 (321)
T ss_dssp EEEEECCCCCCBHHHHHTSS---SCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCT
T ss_pred EEEEEEeCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEccCCCCCEEEEECC
Confidence 89999999999999999632 235899999999999999999999 899999999999999987 7899999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhc
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEAL 395 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 395 (484)
++....... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||...... .....
T Consensus 150 ~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-----~~~~~-- 214 (321)
T 1tki_A 150 QARQLKPGD--------NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ-----QIIEN-- 214 (321)
T ss_dssp TCEECCTTC--------EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH-----HHHHH--
T ss_pred CCeECCCCC--------ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHH-----HHHHH--
Confidence 998764321 122356899999999999988999999999999999999999999753211 11111
Q ss_pred chhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 396 PERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 396 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
+......... .....++.++.+++.+||+.||++|||+.|+++.
T Consensus 215 ------i~~~~~~~~~-----------------~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 215 ------IMNAEYTFDE-----------------EAFKEISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp ------HHHTCCCCCH-----------------HHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ------HHcCCCCCCh-----------------hhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1100000000 0011235678999999999999999999999874
No 56
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=1e-43 Score=349.92 Aligned_cols=268 Identities=25% Similarity=0.361 Sum_probs=211.7
Q ss_pred cCCCCccCccccccceeEEEEEEcC-----CCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcC-CCCCceeEeeeeeee
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDH-----DDHETLVAVKVLNLQHR-GASKSFIAECQALRSI-RHRNLVKIITSCVSV 230 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 230 (484)
.++|.+.+.||+|+||.||+|+... ...+..||+|+++.... .....+.+|+++++++ +||||+++++++.
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~-- 145 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT-- 145 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC--
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeec--
Confidence 4678899999999999999998642 13457899999976543 2336788999999999 9999999999853
Q ss_pred ccCCCceeeEEeecccCCCHHHHHhhcCCC------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCC
Q 011508 231 DFQGNDFEALVYELMVNGSLEEWLHLNRDA------------PRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKP 298 (484)
Q Consensus 231 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~ 298 (484)
.++..++||||+++|+|.+++...... ...+++..++.++.|++.||+||| +++|+||||||
T Consensus 146 ---~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp 219 (382)
T 3tt0_A 146 ---QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAA 219 (382)
T ss_dssp ---SSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCG
T ss_pred ---cCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCc
Confidence 445789999999999999999865421 245899999999999999999999 88999999999
Q ss_pred CCeeecCCCceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCC
Q 011508 299 SNVLLDGELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPT 377 (484)
Q Consensus 299 ~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~ 377 (484)
+||+++.++.+||+|||+++....... ........+|..|+|||++.+..++.++|||||||++|||++ |+.||
T Consensus 220 ~NIll~~~~~~kL~DFG~a~~~~~~~~-----~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~ 294 (382)
T 3tt0_A 220 RNVLVTEDNVMKIADFGLARDIHHIDY-----YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPY 294 (382)
T ss_dssp GGEEECTTCCEEECSCSCCCCSSCCCT-----TCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred ceEEEcCCCcEEEcccCcccccccccc-----cccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCC
Confidence 999999999999999999986643221 112223457889999999999999999999999999999999 99998
Q ss_pred CCCccCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHH
Q 011508 378 NEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNME 457 (484)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ 457 (484)
..... .+...... ...... .+..++.++.+++..||+.||++|||++
T Consensus 295 ~~~~~-----~~~~~~~~-----~~~~~~-----------------------~~~~~~~~l~~li~~~l~~dP~~Rps~~ 341 (382)
T 3tt0_A 295 PGVPV-----EELFKLLK-----EGHRMD-----------------------KPSNCTNELYMMMRDCWHAVPSQRPTFK 341 (382)
T ss_dssp TTCCH-----HHHHHHHH-----TTCCCC-----------------------CCSSCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred CCCCH-----HHHHHHHH-----cCCCCC-----------------------CCccCCHHHHHHHHHHcCCChhhCcCHH
Confidence 65321 11111100 000000 0122356789999999999999999999
Q ss_pred HHHHHHHHHHHHHh
Q 011508 458 EVAAQLLSFRNKLV 471 (484)
Q Consensus 458 evl~~L~~i~~~~~ 471 (484)
||++.|+.+.....
T Consensus 342 ell~~L~~~~~~~~ 355 (382)
T 3tt0_A 342 QLVEDLDRIVALTS 355 (382)
T ss_dssp HHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999976653
No 57
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.8e-44 Score=350.98 Aligned_cols=255 Identities=21% Similarity=0.271 Sum_probs=201.0
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC-----ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH-----RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQ 233 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 233 (484)
+.|++.+.||+|+||.||+|+. ..+++.||||++.... ....+.+.+|+.+++.++||||+++++++.
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~----- 96 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCIN--RETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYS----- 96 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEE--TTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEE-----
T ss_pred cceEEeeEEeeCCCEEEEEEEE--CCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEE-----
Confidence 5689999999999999999984 4467899999986432 123567899999999999999999999864
Q ss_pred CCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCc---eE
Q 011508 234 GNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELT---AH 310 (484)
Q Consensus 234 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~---~k 310 (484)
.+...++||||+++++|.+++.........+++..++.++.||+.||+||| +++|+||||||+||+++.++. +|
T Consensus 97 ~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivHrDlkp~NIl~~~~~~~~~vk 173 (351)
T 3c0i_A 97 SDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVK 173 (351)
T ss_dssp ETTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECSSSTTCCEE
T ss_pred eCCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChHHeEEecCCCCCcEE
Confidence 345889999999999999888755444456899999999999999999999 899999999999999987654 99
Q ss_pred EcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHH
Q 011508 311 VSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNF 390 (484)
Q Consensus 311 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~ 390 (484)
|+|||++....... .......||+.|+|||++.+..++.++|||||||++|+|++|+.||..... ..
T Consensus 174 l~Dfg~a~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~ 240 (351)
T 3c0i_A 174 LGGFGVAIQLGESG-------LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE------RL 240 (351)
T ss_dssp ECCCTTCEECCTTS-------CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH------HH
T ss_pred EecCcceeEecCCC-------eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH------HH
Confidence 99999998764321 112234699999999999999999999999999999999999999975311 11
Q ss_pred HHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 391 VKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 391 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
... +.......... ....++.++.+++.+||+.||++|||+.|+++
T Consensus 241 ~~~--------i~~~~~~~~~~-----------------~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 241 FEG--------IIKGKYKMNPR-----------------QWSHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp HHH--------HHHTCCCCCHH-----------------HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHH--------HHcCCCCCCcc-----------------ccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 110 00000000000 01122567899999999999999999999985
No 58
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=8e-44 Score=336.31 Aligned_cols=259 Identities=26% Similarity=0.421 Sum_probs=204.8
Q ss_pred hcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCc
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
..++|++.+.||+|+||.||+|.+. ++..||+|+++.... ..+.+.+|++++.+++||||+++++++ ....
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~ 92 (283)
T 3gen_A 22 DPKDLTFLKELGTGQFGVVKYGKWR---GQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVC-----TKQR 92 (283)
T ss_dssp CGGGEEEEEECC---CEEEEEEEET---TTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEE-----CSSS
T ss_pred CHHHHHhHhhcCCCCCceEEEEEEc---CCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEE-----ecCC
Confidence 4467889999999999999999865 456799999975533 346799999999999999999999985 4455
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCc
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGL 316 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 316 (484)
..++||||+++++|.+++... ...+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||+
T Consensus 93 ~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~ 166 (283)
T 3gen_A 93 PIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGL 166 (283)
T ss_dssp SEEEEECCCTTCBHHHHHHCG---GGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTSCEEECSTTG
T ss_pred CeEEEEeccCCCcHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCccceEEEcCCCCEEEccccc
Confidence 789999999999999999743 235899999999999999999999 89999999999999999999999999999
Q ss_pred ccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhhc
Q 011508 317 AKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEAL 395 (484)
Q Consensus 317 a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 395 (484)
+........ .......+|+.|+|||.+.+..++.++||||||+++|||+| |+.||...... .....
T Consensus 167 ~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~-----~~~~~-- 233 (283)
T 3gen_A 167 SRYVLDDEY------TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS-----ETAEH-- 233 (283)
T ss_dssp GGGBCCHHH------HSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-----HHHHH--
T ss_pred ccccccccc------ccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh-----HHHHH--
Confidence 986643321 11223346788999999988889999999999999999998 99999753211 11100
Q ss_pred chhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHHH
Q 011508 396 PERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRNK 469 (484)
Q Consensus 396 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~ 469 (484)
+....... .+..++..+.+++..||+.||++|||++|+++.|+++.++
T Consensus 234 ---~~~~~~~~-----------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 234 ---IAQGLRLY-----------------------RPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp ---HHTTCCCC-----------------------CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---HhcccCCC-----------------------CCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 00000000 0112245788999999999999999999999999998754
No 59
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=2e-44 Score=347.58 Aligned_cols=263 Identities=24% Similarity=0.397 Sum_probs=201.8
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCC--eeEEEEEEeeccC-ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCC
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDH--ETLVAVKVLNLQH-RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQG 234 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~--~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 234 (484)
.++|++.+.||+|+||+||+|++..++. ...||+|.+.... ....+.+.+|+.++++++||||++++++|..
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----- 88 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT----- 88 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEES-----
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec-----
Confidence 3568899999999999999999643322 2357888876433 2345789999999999999999999999743
Q ss_pred CceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEccc
Q 011508 235 NDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDF 314 (484)
Q Consensus 235 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 314 (484)
...++|+||+++|+|.+++.... ..+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+||
T Consensus 89 -~~~~~v~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Df 161 (327)
T 3poz_A 89 -STVQLITQLMPFGCLLDYVREHK---DNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDF 161 (327)
T ss_dssp -SSEEEEEECCTTCBHHHHHHHST---TSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCT
T ss_pred -CCeEEEEEecCCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCChheEEECCCCCEEEccC
Confidence 23679999999999999997543 45899999999999999999999 889999999999999999999999999
Q ss_pred CcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHh
Q 011508 315 GLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKE 393 (484)
Q Consensus 315 g~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~ 393 (484)
|+++....... ........+|..|+|||++.+..++.++|||||||++|||+| |+.||...... .+...+..
T Consensus 162 g~a~~~~~~~~-----~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~~~~ 234 (327)
T 3poz_A 162 GLAKLLGAEEK-----EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISSILEK 234 (327)
T ss_dssp THHHHHTTTCC------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHHHHT
T ss_pred cceeEccCCcc-----cccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHH--HHHHHHHc
Confidence 99987643321 111223456889999999999999999999999999999999 99999763221 11111110
Q ss_pred hcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHHHH
Q 011508 394 ALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRNKL 470 (484)
Q Consensus 394 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~ 470 (484)
. ... ..+..++..+.+++.+||+.||++|||+.|+++.|+.+....
T Consensus 235 ~------------~~~-------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~~ 280 (327)
T 3poz_A 235 G------------ERL-------------------PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 280 (327)
T ss_dssp T------------CCC-------------------CCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTSH
T ss_pred C------------CCC-------------------CCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhhh
Confidence 0 000 001223567899999999999999999999999999987543
No 60
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=4.7e-44 Score=342.95 Aligned_cols=279 Identities=25% Similarity=0.412 Sum_probs=205.9
Q ss_pred HhHHHhcCCCCccCccccccceeEEEEEEcC-CCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCCCCceeEeeeee
Q 011508 152 QNLFKATDGFSLENLIGAGSFGSVYKGIFDH-DDHETLVAVKVLNLQHR--GASKSFIAECQALRSIRHRNLVKIITSCV 228 (484)
Q Consensus 152 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~ 228 (484)
.++....++|.+.+.||+|+||.||+|.... ..++..||+|+++.... ...+.+.+|+.++++++||||+++++++.
T Consensus 27 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 106 (313)
T 3brb_A 27 EDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCI 106 (313)
T ss_dssp TTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEE
T ss_pred HhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEe
Confidence 4444556789999999999999999998653 33567899999875532 23467889999999999999999999986
Q ss_pred eeccCCCceeeEEeecccCCCHHHHHhhcC--CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCC
Q 011508 229 SVDFQGNDFEALVYELMVNGSLEEWLHLNR--DAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGE 306 (484)
Q Consensus 229 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~ 306 (484)
..........++||||+++++|.+++.... .....+++..++.++.|++.||.||| +++|+||||||+||+++.+
T Consensus 107 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~ 183 (313)
T 3brb_A 107 EMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS---NRNFLHRDLAARNCMLRDD 183 (313)
T ss_dssp C-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCSGGGEEECTT
T ss_pred eccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCC
Confidence 544333345699999999999999985432 23456999999999999999999999 8999999999999999999
Q ss_pred CceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCc
Q 011508 307 LTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNL 385 (484)
Q Consensus 307 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~ 385 (484)
+.+||+|||++........ ........+++.|+|||.+.+..++.++||||||+++|||++ |..||......
T Consensus 184 ~~~kl~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-- 256 (313)
T 3brb_A 184 MTVCVADFGLSKKIYSGDY-----YRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH-- 256 (313)
T ss_dssp SCEEECSCSCC---------------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--
T ss_pred CcEEEeecCcceecccccc-----cCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH--
Confidence 9999999999986643221 111223457889999999999899999999999999999999 88898653221
Q ss_pred cHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHH
Q 011508 386 TLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLS 465 (484)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~ 465 (484)
....... ...... .+..++..+.+++.+||+.||++|||+.|+++.|++
T Consensus 257 ~~~~~~~-----------~~~~~~--------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~ 305 (313)
T 3brb_A 257 EMYDYLL-----------HGHRLK--------------------QPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEK 305 (313)
T ss_dssp GHHHHHH-----------TTCCCC--------------------CBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHHHH-----------cCCCCC--------------------CCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 1111110 000000 012235678999999999999999999999999999
Q ss_pred HHHHHh
Q 011508 466 FRNKLV 471 (484)
Q Consensus 466 i~~~~~ 471 (484)
+.+.+.
T Consensus 306 l~~~lp 311 (313)
T 3brb_A 306 LLESLP 311 (313)
T ss_dssp HHHHC-
T ss_pred HHHhcC
Confidence 987654
No 61
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.6e-43 Score=339.61 Aligned_cols=272 Identities=24% Similarity=0.336 Sum_probs=202.3
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcC--CCCCceeEeeeeeeeccCCC
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSI--RHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l--~h~niv~~~~~~~~~~~~~~ 235 (484)
.++|++.+.||+|+||.||+|+.. ++.||||++... ....+..|.+++..+ +||||+++++++.... ...
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~----~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~-~~~ 107 (337)
T 3mdy_A 36 AKQIQMVKQIGKGRYGEVWMGKWR----GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGT-GSW 107 (337)
T ss_dssp HHHCEEEEEEEEETTEEEEEEEET----TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESC-GGG
T ss_pred ccceEEEeEeecCCCeEEEEEEEC----CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCC-CCC
Confidence 467999999999999999999864 678999998643 234455566666554 9999999999875432 222
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC--------CeeecCCCCCCeeecCCC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCET--------PIVHCDLKPSNVLLDGEL 307 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~--------~ivH~dlk~~NIll~~~~ 307 (484)
...++||||+++|+|.++++.. .+++..++.++.|++.||+||| +. +|+||||||+||+++.++
T Consensus 108 ~~~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~~~~ivH~Dikp~Nill~~~~ 179 (337)
T 3mdy_A 108 TQLYLITDYHENGSLYDYLKST-----TLDAKSMLKLAYSSVSGLCHLH---TEIFSTQGKPAIAHRDLKSKNILVKKNG 179 (337)
T ss_dssp CEEEEEECCCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHH---SCBCSTTCBCCEECSCCCGGGEEECTTS
T ss_pred CceEEEEeccCCCcHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHH---HhhhhhccCCCEEecccchHHEEECCCC
Confidence 5789999999999999999743 4899999999999999999999 77 999999999999999999
Q ss_pred ceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcc------cceehhhHHHHHHHhC--------
Q 011508 308 TAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTS------GDVYSFGILLLEMFTG-------- 373 (484)
Q Consensus 308 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~------~Dvws~Gvvl~elltg-------- 373 (484)
.+||+|||++.......... ........||+.|+|||++.+...+.+ +|||||||++|||+||
T Consensus 180 ~~kl~Dfg~a~~~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~ 256 (337)
T 3mdy_A 180 TCCIADLGLAVKFISDTNEV---DIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVE 256 (337)
T ss_dssp CEEECCCTTCEECC------------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCC
T ss_pred CEEEEeCCCceeeccccccc---cCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccc
Confidence 99999999997664332111 111123469999999999887766655 9999999999999999
Q ss_pred --CCCCCCCccCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcC
Q 011508 374 --KGPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPR 451 (484)
Q Consensus 374 --~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~ 451 (484)
+.||.................. ...+.. .........+|+.++.+++.+||+.||+
T Consensus 257 ~~~~p~~~~~~~~~~~~~~~~~~~--------~~~~~~--------------~~~~~~~~~~~~~~l~~li~~~l~~dP~ 314 (337)
T 3mdy_A 257 EYQLPYHDLVPSDPSYEDMREIVC--------IKKLRP--------------SFPNRWSSDECLRQMGKLMTECWAHNPA 314 (337)
T ss_dssp CCCCTTTTTSCSSCCHHHHHHHHT--------TSCCCC--------------CCCGGGGGSHHHHHHHHHHHHHSCSSGG
T ss_pred cccccHhhhcCCCCchhhhHHHHh--------hhccCc--------------cccccchhhHHHHHHHHHHHHhhhhChh
Confidence 5555443322222211111100 000000 0001111346788999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHH
Q 011508 452 ERMNMEEVAAQLLSFRNKL 470 (484)
Q Consensus 452 ~RPt~~evl~~L~~i~~~~ 470 (484)
+|||+.||++.|+.+.+..
T Consensus 315 ~Rps~~ell~~L~~l~~~~ 333 (337)
T 3mdy_A 315 SRLTALRVKKTLAKMSESQ 333 (337)
T ss_dssp GSCCHHHHHHHHHHHHHTT
T ss_pred hCCCHHHHHHHHHHHHhhc
Confidence 9999999999999987654
No 62
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.6e-44 Score=347.70 Aligned_cols=271 Identities=23% Similarity=0.329 Sum_probs=208.0
Q ss_pred hcCCCCccCccccccceeEEEEEEc---CCCCeeEEEEEEeeccC-ccchHHHHHHHHHHHcC-CCCCceeEeeeeeeec
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFD---HDDHETLVAVKVLNLQH-RGASKSFIAECQALRSI-RHRNLVKIITSCVSVD 231 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~---~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~ 231 (484)
..++|.+.+.||+|+||.||+|+.. ....+..||+|++.... ....+.+.+|+.+++++ +||||+++++++.
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~--- 119 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACT--- 119 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEC---
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe---
Confidence 4568899999999999999999963 23457789999997543 23446799999999999 9999999999853
Q ss_pred cCCCceeeEEeecccCCCHHHHHhhcCCC-------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCee
Q 011508 232 FQGNDFEALVYELMVNGSLEEWLHLNRDA-------------------PRNLNLLQRLSIAVDVASTLEYLHHYCETPIV 292 (484)
Q Consensus 232 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~-------------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iv 292 (484)
..+..++||||+++|+|.+++...... ...+++..++.++.|++.||+||| +++|+
T Consensus 120 --~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~iv 194 (344)
T 1rjb_A 120 --LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCV 194 (344)
T ss_dssp --SSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH---HTTEE
T ss_pred --eCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCcc
Confidence 345789999999999999999754321 134899999999999999999999 89999
Q ss_pred ecCCCCCCeeecCCCceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh
Q 011508 293 HCDLKPSNVLLDGELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT 372 (484)
Q Consensus 293 H~dlk~~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt 372 (484)
||||||+||+++.++.+||+|||++........ ........+|+.|+|||.+.+..++.++|||||||++|||+|
T Consensus 195 H~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~-----~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t 269 (344)
T 1rjb_A 195 HRDLAARNVLVTHGKVVKICDFGLARDIMSDSN-----YVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269 (344)
T ss_dssp ETTCSGGGEEEETTTEEEECCCGGGSCGGGCTT-----SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTT
T ss_pred cCCCChhhEEEcCCCcEEeCCCccCcccccCcc-----ceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHc
Confidence 999999999999999999999999986643221 112233457889999999988889999999999999999998
Q ss_pred -CCCCCCCCccCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcC
Q 011508 373 -GKGPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPR 451 (484)
Q Consensus 373 -g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~ 451 (484)
|..||....... ......... .... .+..++.++.+++.+||+.||.
T Consensus 270 ~g~~p~~~~~~~~-~~~~~~~~~--------~~~~-----------------------~~~~~~~~l~~li~~~l~~dp~ 317 (344)
T 1rjb_A 270 LGVNPYPGIPVDA-NFYKLIQNG--------FKMD-----------------------QPFYATEEIYIIMQSCWAFDSR 317 (344)
T ss_dssp TSCCSSTTCCCSH-HHHHHHHTT--------CCCC-----------------------CCTTCCHHHHHHHHHHTCSSGG
T ss_pred CCCCCcccCCcHH-HHHHHHhcC--------CCCC-----------------------CCCCCCHHHHHHHHHHcCCCch
Confidence 999997643221 111111110 0000 0122356789999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhh
Q 011508 452 ERMNMEEVAAQLLSFRNKLVK 472 (484)
Q Consensus 452 ~RPt~~evl~~L~~i~~~~~~ 472 (484)
+|||+.||++.|+.+......
T Consensus 318 ~Rps~~~l~~~l~~~~~~~~~ 338 (344)
T 1rjb_A 318 KRPSFPNLTSFLGCQLADAEE 338 (344)
T ss_dssp GSCCHHHHHHHHHHHC-----
T ss_pred hCcCHHHHHHHHHHHHHHHHH
Confidence 999999999999998766543
No 63
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=2.3e-43 Score=335.31 Aligned_cols=273 Identities=22% Similarity=0.306 Sum_probs=212.3
Q ss_pred hcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCc
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
..++|++.+.||+|+||.||+|+. ..+++.||+|++..... .+.+.+|+.+++.++|++++..+.++. ..+.
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~--~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~----~~~~ 78 (296)
T 3uzp_A 7 VGNRYRLGRKIGSGSFGDIYLGTD--IAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCG----AEGD 78 (296)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEE--TTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEE----EETT
T ss_pred eccEEEEEEEEccCCCeEEEEEEE--cCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCcccccc----CCCC
Confidence 357899999999999999999984 34678999999875432 356889999999999999888777663 3345
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeee---cCCCceEEcc
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLL---DGELTAHVSD 313 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll---~~~~~~kl~D 313 (484)
..++||||+ +++|.+++.... ..+++..++.++.|++.||+||| +++|+||||||+||++ +.++.+||+|
T Consensus 79 ~~~lv~e~~-~~~L~~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~D 151 (296)
T 3uzp_A 79 YNVMVMELL-GPSLEDLFNFCS---RKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIID 151 (296)
T ss_dssp EEEEEEECC-CCBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTTCEEECC
T ss_pred ceEEEEEec-CCCHHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHeEEecCCCCCeEEEee
Confidence 789999999 999999997432 35899999999999999999999 8999999999999999 4788999999
Q ss_pred cCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCC--ccHhHHH
Q 011508 314 FGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGN--LTLHNFV 391 (484)
Q Consensus 314 fg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~--~~~~~~~ 391 (484)
||++.....................||..|+|||.+.+..++.++|||||||++|||++|+.||....... ..+....
T Consensus 152 fg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~ 231 (296)
T 3uzp_A 152 FGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERIS 231 (296)
T ss_dssp CTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHH
T ss_pred CCCcccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhc
Confidence 99998765433211111122344579999999999999999999999999999999999999997643221 1111111
Q ss_pred HhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHHHHh
Q 011508 392 KEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRNKLV 471 (484)
Q Consensus 392 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~~ 471 (484)
........... ...++.++.+++..||+.||++|||+.||++.|+.+..+..
T Consensus 232 ~~~~~~~~~~~----------------------------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~ 283 (296)
T 3uzp_A 232 EKKMSTPIEVL----------------------------CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp HHHHHSCHHHH----------------------------TTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred ccccCCchHHH----------------------------HhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcC
Confidence 11110000000 11235678999999999999999999999999999987764
Q ss_pred h
Q 011508 472 K 472 (484)
Q Consensus 472 ~ 472 (484)
.
T Consensus 284 ~ 284 (296)
T 3uzp_A 284 F 284 (296)
T ss_dssp C
T ss_pred C
Confidence 3
No 64
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=1.9e-43 Score=335.86 Aligned_cols=275 Identities=21% Similarity=0.307 Sum_probs=209.5
Q ss_pred HhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 156 KATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 156 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
...++|++.+.||+|+||.||+|+. ..+++.||+|++..... ...+.+|+.+++.++|++++..+..+. ..+
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~----~~~ 77 (296)
T 4hgt_A 6 RVGNRYRLGRKIGSGSFGDIYLGTD--IAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCG----AEG 77 (296)
T ss_dssp -----CEEEEEEEECSSSEEEEEEE--TTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEE----EET
T ss_pred ccCCceEEeeeecCCCCeEEEEEEE--cCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeec----CCC
Confidence 3457899999999999999999984 34678999998765432 245788999999999999888887763 344
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeee---cCCCceEEc
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLL---DGELTAHVS 312 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll---~~~~~~kl~ 312 (484)
...++||||+ +++|.+++.... ..+++..++.++.|++.||+||| +++|+||||||+||++ +.++.+||+
T Consensus 78 ~~~~lv~e~~-~~~L~~~~~~~~---~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~~~~kL~ 150 (296)
T 4hgt_A 78 DYNVMVMELL-GPSLEDLFNFCS---RKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYII 150 (296)
T ss_dssp TEEEEEEECC-CCBHHHHHHHTT---SCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECCGGGTTCEEEC
T ss_pred CceEEEEEcc-CCCHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeeeeccCCCCeEEEe
Confidence 5789999999 999999997432 35899999999999999999999 8999999999999999 788999999
Q ss_pred ccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCc--cHhHH
Q 011508 313 DFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNL--TLHNF 390 (484)
Q Consensus 313 Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~--~~~~~ 390 (484)
|||++.....................||..|+|||.+.+..++.++|||||||++|||++|+.||........ .+...
T Consensus 151 Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~ 230 (296)
T 4hgt_A 151 DFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERI 230 (296)
T ss_dssp CCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHH
T ss_pred cCccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhh
Confidence 9999987754332111111223346799999999999999999999999999999999999999976433211 11111
Q ss_pred HHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHHHH
Q 011508 391 VKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRNKL 470 (484)
Q Consensus 391 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~ 470 (484)
.....+...... ...++.++.+++..||+.||++|||+.||++.|+.+..+.
T Consensus 231 ~~~~~~~~~~~~----------------------------~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~ 282 (296)
T 4hgt_A 231 SEKKMSTPIEVL----------------------------CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 282 (296)
T ss_dssp HHHHHHSCHHHH----------------------------TTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHH
T ss_pred hcccccchhhhh----------------------------hccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHh
Confidence 111110000000 1122567899999999999999999999999999998876
Q ss_pred hhc
Q 011508 471 VKN 473 (484)
Q Consensus 471 ~~~ 473 (484)
...
T Consensus 283 ~~~ 285 (296)
T 4hgt_A 283 GFS 285 (296)
T ss_dssp TCC
T ss_pred CCC
Confidence 543
No 65
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=5.3e-44 Score=344.47 Aligned_cols=248 Identities=25% Similarity=0.352 Sum_probs=198.8
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCC
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQG 234 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 234 (484)
.++|.+.+.||+|+||.||+|+. ..+++.||+|++.... ......+.+|+.+++.++||||+++++++. .
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~--~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~-----~ 80 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATH--YKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVIT-----T 80 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEE--TTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEE-----C
T ss_pred cCCEEEEEEEecCCCeEEEEEEE--CCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEE-----e
Confidence 36899999999999999999994 4467899999987432 223457899999999999999999999954 3
Q ss_pred CceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEccc
Q 011508 235 NDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDF 314 (484)
Q Consensus 235 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 314 (484)
....++||||+ +|+|.+++.... .+++.+++.++.|++.||+||| +.+|+||||||+||++++++.+||+||
T Consensus 81 ~~~~~lv~E~~-~g~l~~~l~~~~----~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~DF 152 (336)
T 3h4j_B 81 PTDIVMVIEYA-GGELFDYIVEKK----RMTEDEGRRFFQQIICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADF 152 (336)
T ss_dssp SSEEEEEECCC-CEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCSTTTEEECTTCCEEECCS
T ss_pred CCEEEEEEECC-CCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCchhhEEEcCCCCEEEEEe
Confidence 45789999999 789999987543 4899999999999999999999 889999999999999999999999999
Q ss_pred CcccccccccccCCCCccccccccccccccCccccCCCCC-CcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHh
Q 011508 315 GLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEV-STSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKE 393 (484)
Q Consensus 315 g~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 393 (484)
|++....... ......||+.|+|||++.+..+ +.++|||||||++|+|++|+.||........
T Consensus 153 G~s~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~-------- 216 (336)
T 3h4j_B 153 GLSNIMTDGN--------FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL-------- 216 (336)
T ss_dssp SCTBTTTTSB--------TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC--------
T ss_pred ccceeccCCc--------ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH--------
Confidence 9998653321 1233469999999999988776 7899999999999999999999975322110
Q ss_pred hcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 394 ALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 394 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
...+..... ..+..++.++.+++.+||+.||.+|||++|+++.
T Consensus 217 -----~~~i~~~~~---------------------~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 217 -----FKKVNSCVY---------------------VMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp -----BCCCCSSCC---------------------CCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred -----HHHHHcCCC---------------------CCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 000000000 0012235678899999999999999999999864
No 66
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=9.5e-44 Score=349.23 Aligned_cols=250 Identities=23% Similarity=0.323 Sum_probs=195.7
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcC-CCCCceeEeeeeeeeccC
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSI-RHRNLVKIITSCVSVDFQ 233 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~ 233 (484)
.++|++.+.||+|+||.||+|+.. .+++.||+|+++... ....+.+.+|..++.++ +||||+++++++ .
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~--~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~-----~ 123 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLK--KTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCF-----Q 123 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET--TTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEE-----E
T ss_pred hhHcEEEEEEeeCCCeEEEEEEEC--CCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEE-----E
Confidence 357899999999999999999954 457899999998543 22335688899999887 899999999985 4
Q ss_pred CCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcc
Q 011508 234 GNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSD 313 (484)
Q Consensus 234 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~D 313 (484)
.....++||||+++|+|.+++.... .+++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+|
T Consensus 124 ~~~~~~lV~E~~~gg~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~D 196 (396)
T 4dc2_A 124 TESRLFFVIEYVNGGDLMFHMQRQR----KLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTD 196 (396)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECC
T ss_pred ECCEEEEEEEcCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEECCCCCEEEee
Confidence 4558999999999999999997543 4899999999999999999999 89999999999999999999999999
Q ss_pred cCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCcc---HhHH
Q 011508 314 FGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLT---LHNF 390 (484)
Q Consensus 314 fg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~---~~~~ 390 (484)
||+++..... .......+||+.|+|||++.+..++.++|||||||++|||++|+.||......... ....
T Consensus 197 FGla~~~~~~-------~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~ 269 (396)
T 4dc2_A 197 YGMCKEGLRP-------GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDY 269 (396)
T ss_dssp CTTCBCCCCT-------TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHH
T ss_pred cceeeecccC-------CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHH
Confidence 9999853221 12233467999999999999999999999999999999999999999653221110 0000
Q ss_pred HHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCH
Q 011508 391 VKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNM 456 (484)
Q Consensus 391 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~ 456 (484)
.. ..+....+.. +..+..++.+++.+||+.||++||++
T Consensus 270 ~~-------~~i~~~~~~~---------------------p~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 270 LF-------QVILEKQIRI---------------------PRSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp HH-------HHHHHCCCCC---------------------CTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred HH-------HHHhccccCC---------------------CCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 10 0011100000 12235678899999999999999996
No 67
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=1.2e-44 Score=349.29 Aligned_cols=281 Identities=26% Similarity=0.359 Sum_probs=212.1
Q ss_pred cCCCCccCccccccceeEEEEEEc--CCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFD--HDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~--~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
.++|++.+.||+|+||.||+|++. +..++..||+|++........+.+.+|++++++++||||+++++++.. .+.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~ 98 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYG---PGR 98 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC---SSS
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEec---CCC
Confidence 357899999999999999999863 334678999999987655556779999999999999999999998652 345
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
...++||||+++++|.+++.... ..+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||
T Consensus 99 ~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg 172 (327)
T 3lxl_A 99 QSLRLVMEYLPSGCLRDFLQRHR---ARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFG 172 (327)
T ss_dssp CEEEEEEECCTTCBHHHHHHHHG---GGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCGG
T ss_pred ceEEEEEeecCCCCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChhhEEECCCCCEEEcccc
Confidence 67899999999999999997543 24899999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhc
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEAL 395 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 395 (484)
++......... ........++..|+|||++.+..++.++||||||+++|+|++|+.||..................
T Consensus 173 ~~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~ 248 (327)
T 3lxl_A 173 LAKLLPLDKDY----YVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVP 248 (327)
T ss_dssp GCEECCTTCSE----EECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CC
T ss_pred cceecccCCcc----ceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccc
Confidence 99876433211 11122345888899999998888999999999999999999999998642111000000000000
Q ss_pred -chhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHHHH
Q 011508 396 -PERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRNKL 470 (484)
Q Consensus 396 -~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~ 470 (484)
...+.+.+.... ....+..++..+.+++..||+.||++|||+.|+++.|+.+....
T Consensus 249 ~~~~~~~~~~~~~-------------------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 305 (327)
T 3lxl_A 249 ALSRLLELLEEGQ-------------------RLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGS 305 (327)
T ss_dssp HHHHHHHHHHTTC-------------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC----
T ss_pred cHHHHHHHhhccc-------------------CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 000011110000 00112344678999999999999999999999999999886544
No 68
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=1e-43 Score=339.40 Aligned_cols=258 Identities=29% Similarity=0.410 Sum_probs=198.7
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCcee
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFE 238 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 238 (484)
++|++.+.||+|+||.||+|++. ++.||+|++... ...+.+.+|++++++++||||+++++++. +..
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~----~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-------~~~ 74 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR----AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL-------NPV 74 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET----TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCT-------TTT
T ss_pred hHeeeeeEeecCCCceEEEEEEC----CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEc-------CCc
Confidence 56888999999999999999864 577999998643 34567899999999999999999999853 246
Q ss_pred eEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCc-eEEcccCcc
Q 011508 239 ALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELT-AHVSDFGLA 317 (484)
Q Consensus 239 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~-~kl~Dfg~a 317 (484)
++||||+++|+|.+++.... ....+++..++.++.|+++||+|||+.+.++|+||||||+||+++.++. +||+|||++
T Consensus 75 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~ 153 (307)
T 2eva_A 75 CLVMEYAEGGSLYNVLHGAE-PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA 153 (307)
T ss_dssp EEEEECCTTCBHHHHHHCSS-SEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-
T ss_pred EEEEEcCCCCCHHHHHhccC-CCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccc
Confidence 89999999999999997433 1234789999999999999999999432389999999999999998886 799999999
Q ss_pred cccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcch
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPE 397 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 397 (484)
...... .....||..|+|||++.+..++.++||||||+++|||++|+.||................
T Consensus 154 ~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~---- 219 (307)
T 2eva_A 154 CDIQTH----------MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHN---- 219 (307)
T ss_dssp ---------------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHT----
T ss_pred cccccc----------cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhc----
Confidence 755321 112358999999999999999999999999999999999999997542221111100000
Q ss_pred hhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHHHHh
Q 011508 398 RLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRNKLV 471 (484)
Q Consensus 398 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~~ 471 (484)
-..+.. ...++..+.+++.+||+.||++|||++|+++.|+.+...+.
T Consensus 220 ----~~~~~~-----------------------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 266 (307)
T 2eva_A 220 ----GTRPPL-----------------------IKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFP 266 (307)
T ss_dssp ----TCCCCC-----------------------BTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCC
T ss_pred ----CCCCCc-----------------------ccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhcc
Confidence 000000 12235678899999999999999999999999999876553
No 69
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.7e-43 Score=340.68 Aligned_cols=251 Identities=20% Similarity=0.246 Sum_probs=200.0
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCcc------chHHHHHHHHHHHcCCCCCceeEeeeeeeecc
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRG------ASKSFIAECQALRSIRHRNLVKIITSCVSVDF 232 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 232 (484)
+.|.+.+.||+|+||.||+|+. ..++..||+|++...... ..+.+.+|+.++++++||||+++++++.
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~--~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~---- 84 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCRE--KSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYE---- 84 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEE--TTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEE----
T ss_pred cceEeceEEeeCCCeEEEEEEE--CCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEE----
Confidence 4688999999999999999994 446788999999754321 3467899999999999999999999853
Q ss_pred CCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCC----c
Q 011508 233 QGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGEL----T 308 (484)
Q Consensus 233 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~----~ 308 (484)
.....++||||+++++|.+++.. ...+++..++.++.|++.||+||| +++|+||||||+||+++.++ .
T Consensus 85 -~~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~ 156 (326)
T 2y0a_A 85 -NKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPR 156 (326)
T ss_dssp -CSSEEEEEEECCCSCBHHHHHTT----SSCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCSSSSSCC
T ss_pred -eCCEEEEEEEcCCCCCHHHHHHh----cCCcCHHHHHHHHHHHHHHHHHHH---HCCeEcCCCCHHHEEEecCCCCCCC
Confidence 45588999999999999999963 245899999999999999999999 89999999999999998887 8
Q ss_pred eEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHh
Q 011508 309 AHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLH 388 (484)
Q Consensus 309 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~ 388 (484)
+||+|||++....... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||......
T Consensus 157 ~kl~Dfg~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~----- 223 (326)
T 2y0a_A 157 IKIIDFGLAHKIDFGN--------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ----- 223 (326)
T ss_dssp EEECCCTTCEECCTTS--------CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH-----
T ss_pred EEEEECCCCeECCCCC--------ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH-----
Confidence 9999999998764321 122346999999999999899999999999999999999999999653211
Q ss_pred HHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 389 NFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 389 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
...... ... ...... .....++..+.+++.+||+.||++|||+.|+++
T Consensus 224 ~~~~~~-----~~~-~~~~~~-------------------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 224 ETLANV-----SAV-NYEFED-------------------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp HHHHHH-----HHT-CCCCCH-------------------HHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHHH-----Hhc-CCCcCc-------------------cccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 111100 000 000000 001122567889999999999999999999986
No 70
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1.2e-43 Score=340.29 Aligned_cols=267 Identities=26% Similarity=0.384 Sum_probs=210.4
Q ss_pred hcCCCCccCccccccceeEEEEEEcC---CCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeecc
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDH---DDHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDF 232 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~---~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 232 (484)
..++|.+.+.||+|+||.||+|+... ..++..||+|+++.... ...+.+.+|++++++++||||+++++++
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~----- 95 (314)
T 2ivs_A 21 PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGAC----- 95 (314)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-----
T ss_pred chhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEE-----
Confidence 34678899999999999999998632 33568899999975432 3346788999999999999999999985
Q ss_pred CCCceeeEEeecccCCCHHHHHhhcCC--------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCee
Q 011508 233 QGNDFEALVYELMVNGSLEEWLHLNRD--------------------APRNLNLLQRLSIAVDVASTLEYLHHYCETPIV 292 (484)
Q Consensus 233 ~~~~~~~lv~e~~~~gsL~~~l~~~~~--------------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iv 292 (484)
..+...++||||+++++|.+++..... ....+++.+++.++.|++.||+||| +++|+
T Consensus 96 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~iv 172 (314)
T 2ivs_A 96 SQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLV 172 (314)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHH---HTTEE
T ss_pred ecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHH---HCCCc
Confidence 345578999999999999999986543 1234899999999999999999999 89999
Q ss_pred ecCCCCCCeeecCCCceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh
Q 011508 293 HCDLKPSNVLLDGELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT 372 (484)
Q Consensus 293 H~dlk~~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt 372 (484)
||||||+||+++.++.+||+|||++......... .......+++.|+|||.+.+..++.++||||||+++|||++
T Consensus 173 H~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t 247 (314)
T 2ivs_A 173 HRDLAARNILVAEGRKMKISDFGLSRDVYEEDSY-----VKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247 (314)
T ss_dssp CCCCSGGGEEEETTTEEEECCCTTCEECTTTSCE-----ECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHT
T ss_pred ccccchheEEEcCCCCEEEccccccccccccccc-----eeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHh
Confidence 9999999999999999999999999866432211 11223457889999999988889999999999999999999
Q ss_pred -CCCCCCCCccCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcC
Q 011508 373 -GKGPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPR 451 (484)
Q Consensus 373 -g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~ 451 (484)
|+.||...... .+...+.... ... .+..++..+.+++.+||+.||+
T Consensus 248 ~g~~p~~~~~~~--~~~~~~~~~~--------~~~-----------------------~~~~~~~~~~~li~~~l~~dp~ 294 (314)
T 2ivs_A 248 LGGNPYPGIPPE--RLFNLLKTGH--------RME-----------------------RPDNCSEEMYRLMLQCWKQEPD 294 (314)
T ss_dssp TSCCSSTTCCGG--GHHHHHHTTC--------CCC-----------------------CCTTCCHHHHHHHHHHTCSSGG
T ss_pred CCCCCCCCCCHH--HHHHHhhcCC--------cCC-----------------------CCccCCHHHHHHHHHHccCChh
Confidence 99999754221 1111111000 000 0122356789999999999999
Q ss_pred CCCCHHHHHHHHHHHHHH
Q 011508 452 ERMNMEEVAAQLLSFRNK 469 (484)
Q Consensus 452 ~RPt~~evl~~L~~i~~~ 469 (484)
+|||+.|+++.|+++..+
T Consensus 295 ~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 295 KRPVFADISKDLEKMMVK 312 (314)
T ss_dssp GSCCHHHHHHHHHHHHHT
T ss_pred hCcCHHHHHHHHHHHHhh
Confidence 999999999999988654
No 71
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=3.6e-44 Score=344.43 Aligned_cols=274 Identities=19% Similarity=0.232 Sum_probs=209.8
Q ss_pred hcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCc
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
..++|++.+.||+|+||.||+|+. ..+++.||+|++........+.+.+|+++++.++||||+++++++.... ....
T Consensus 27 ~~~~y~~~~~lg~G~~g~V~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~~ 103 (317)
T 2buj_A 27 DNKHYLFIQKLGEGGFSYVDLVEG--LHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRER-GAKH 103 (317)
T ss_dssp TTEEEEEEEEEEC--CEEEEEEEE--TTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEE-TTEE
T ss_pred CCeEEEEEEEecCCCCeEEEEEEe--cCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEecc-CCCc
Confidence 346799999999999999999984 3457899999997765556678999999999999999999999976432 3345
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCc
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGL 316 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 316 (484)
..++||||+++|+|.+++.........+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||.
T Consensus 104 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~dfg~ 180 (317)
T 2buj_A 104 EAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGS 180 (317)
T ss_dssp EEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCSS
T ss_pred eeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCCEEEEecCc
Confidence 789999999999999999865545567999999999999999999999 88999999999999999999999999999
Q ss_pred ccccccccccCCC--CccccccccccccccCccccCCCC---CCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHH
Q 011508 317 AKFLPEAANNLSS--NQSSSVGVKGTVGYAAPEYGMGSE---VSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFV 391 (484)
Q Consensus 317 a~~~~~~~~~~~~--~~~~~~~~~g~~~y~aPE~~~~~~---~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 391 (484)
+............ .........||..|+|||++.+.. ++.++||||||+++|||++|+.||..............
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~ 260 (317)
T 2buj_A 181 MNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAV 260 (317)
T ss_dssp CEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHH
T ss_pred chhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHh
Confidence 8765322110000 000112345799999999987654 68899999999999999999999864322211111111
Q ss_pred HhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHH
Q 011508 392 KEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFR 467 (484)
Q Consensus 392 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~ 467 (484)
.. .... + ....++..+.+++.+||+.||.+|||+.|+++.|+.+.
T Consensus 261 ~~------------~~~~-~------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~ 305 (317)
T 2buj_A 261 QN------------QLSI-P------------------QSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQ 305 (317)
T ss_dssp HC------------C--C-C------------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTC
T ss_pred hc------------cCCC-C------------------ccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcC
Confidence 10 0000 0 01122567899999999999999999999999998764
No 72
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=2.5e-44 Score=346.45 Aligned_cols=275 Identities=25% Similarity=0.409 Sum_probs=196.9
Q ss_pred HHhcCCCCccCccccccceeEEEEEEcCCCC-eeEEEEEEeeccC--ccchHHHHHHHHHHHcCCCCCceeEeeeeeeec
Q 011508 155 FKATDGFSLENLIGAGSFGSVYKGIFDHDDH-ETLVAVKVLNLQH--RGASKSFIAECQALRSIRHRNLVKIITSCVSVD 231 (484)
Q Consensus 155 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~-~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 231 (484)
....++|++.+.||+|+||.||+|+....+. ...||||+++... ....+.+.+|++++++++||||+++++++....
T Consensus 19 ~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 98 (323)
T 3qup_A 19 LIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSR 98 (323)
T ss_dssp BCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-
T ss_pred ccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccc
Confidence 3455789999999999999999998543221 1379999997542 334578999999999999999999999875433
Q ss_pred cCC-CceeeEEeecccCCCHHHHHhhcCC--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCc
Q 011508 232 FQG-NDFEALVYELMVNGSLEEWLHLNRD--APRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELT 308 (484)
Q Consensus 232 ~~~-~~~~~lv~e~~~~gsL~~~l~~~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~ 308 (484)
..+ ....++||||+++|+|.+++..... ....+++..++.++.|++.||+||| +++|+||||||+||+++.++.
T Consensus 99 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~Dikp~NIli~~~~~ 175 (323)
T 3qup_A 99 AKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMT 175 (323)
T ss_dssp ------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSC
T ss_pred cccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHH---cCCcccCCCCcceEEEcCCCC
Confidence 111 1123899999999999999975432 2235899999999999999999999 899999999999999999999
Q ss_pred eEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccH
Q 011508 309 AHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTL 387 (484)
Q Consensus 309 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~ 387 (484)
+||+|||+++....... ........+++.|+|||.+.+..++.++|||||||++|||++ |+.||....... .
T Consensus 176 ~kl~Dfg~a~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~--~ 248 (323)
T 3qup_A 176 VCVADFGLSRKIYSGDY-----YRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE--I 248 (323)
T ss_dssp EEECCCCC----------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--H
T ss_pred EEEeecccccccccccc-----ccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHH--H
Confidence 99999999986643221 111223446788999999988899999999999999999999 999997632211 1
Q ss_pred hHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHH
Q 011508 388 HNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFR 467 (484)
Q Consensus 388 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~ 467 (484)
...+ ....... .+..++.++.+++.+||+.||++|||+.|+++.|+++.
T Consensus 249 ~~~~-----------~~~~~~~--------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l 297 (323)
T 3qup_A 249 YNYL-----------IGGNRLK--------------------QPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENIL 297 (323)
T ss_dssp HHHH-----------HTTCCCC--------------------CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHH-----------hcCCCCC--------------------CCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 1111 0000000 01223567899999999999999999999999999987
Q ss_pred HHH
Q 011508 468 NKL 470 (484)
Q Consensus 468 ~~~ 470 (484)
...
T Consensus 298 ~~~ 300 (323)
T 3qup_A 298 GHL 300 (323)
T ss_dssp HC-
T ss_pred HHh
Confidence 654
No 73
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=3.9e-44 Score=338.09 Aligned_cols=263 Identities=23% Similarity=0.378 Sum_probs=198.3
Q ss_pred hcCCCCccCccccccceeEEEEEEcCC-CCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCC
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHD-DHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQG 234 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 234 (484)
..++|++.+.||+|+||.||+|+.... ..+..||+|++..... ...+.+.+|+.++++++||||+++++++.
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------ 86 (281)
T 1mp8_A 13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT------ 86 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC------
T ss_pred ehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc------
Confidence 346789999999999999999987543 2356799999875433 23467889999999999999999999852
Q ss_pred CceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEccc
Q 011508 235 NDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDF 314 (484)
Q Consensus 235 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 314 (484)
++..++||||+++++|.+++.... ..+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+||
T Consensus 87 ~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Df 160 (281)
T 1mp8_A 87 ENPVWIIMELCTLGELRSFLQVRK---YSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDF 160 (281)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHTT---TTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECC-
T ss_pred cCccEEEEecCCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHEEECCCCCEEECcc
Confidence 235789999999999999997432 35899999999999999999999 899999999999999999999999999
Q ss_pred CcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHh
Q 011508 315 GLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKE 393 (484)
Q Consensus 315 g~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~ 393 (484)
|++........ .......+++.|+|||.+.+..++.++||||||+++|||++ |..||....... ....+.
T Consensus 161 g~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~--~~~~i~- 231 (281)
T 1mp8_A 161 GLSRYMEDSTY------YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND--VIGRIE- 231 (281)
T ss_dssp ------------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHHHHH-
T ss_pred ccccccCcccc------cccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH--HHHHHH-
Confidence 99987643221 11122346788999999988889999999999999999997 999997642211 111110
Q ss_pred hcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHHHH
Q 011508 394 ALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRNKL 470 (484)
Q Consensus 394 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~ 470 (484)
...... .+..++..+.+++..||+.||++|||+.|+++.|+.+.+..
T Consensus 232 ----------~~~~~~--------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 278 (281)
T 1mp8_A 232 ----------NGERLP--------------------MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 278 (281)
T ss_dssp ----------TTCCCC--------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ----------cCCCCC--------------------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 000000 01233667899999999999999999999999999987664
No 74
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=8.3e-44 Score=341.18 Aligned_cols=269 Identities=24% Similarity=0.379 Sum_probs=212.4
Q ss_pred hcCCCCccCccccccceeEEEEEEc---CCCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcC-CCCCceeEeeeeeeec
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFD---HDDHETLVAVKVLNLQHR-GASKSFIAECQALRSI-RHRNLVKIITSCVSVD 231 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~---~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~ 231 (484)
..++|++.+.||+|+||.||+|++. +..++..||+|+++.... ...+.+.+|+.+++++ +||||+++++++.
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~--- 97 (313)
T 1t46_A 21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT--- 97 (313)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC---
T ss_pred ChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEe---
Confidence 3467899999999999999999863 344678999999975543 2346789999999999 9999999999853
Q ss_pred cCCCceeeEEeecccCCCHHHHHhhcCCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCC
Q 011508 232 FQGNDFEALVYELMVNGSLEEWLHLNRDA--------------PRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLK 297 (484)
Q Consensus 232 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk 297 (484)
.++..++||||+++|+|.+++...... ...+++..++.++.|++.||+||| +++|+|||||
T Consensus 98 --~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlk 172 (313)
T 1t46_A 98 --IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLA 172 (313)
T ss_dssp --SSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCS
T ss_pred --cCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCc
Confidence 445789999999999999999865321 235899999999999999999999 8999999999
Q ss_pred CCCeeecCCCceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCC
Q 011508 298 PSNVLLDGELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGP 376 (484)
Q Consensus 298 ~~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p 376 (484)
|+||+++.++.+||+|||++........ ........+++.|+|||.+.+..++.++||||||+++|||+| |+.|
T Consensus 173 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p 247 (313)
T 1t46_A 173 ARNILLTHGRITKICDFGLARDIKNDSN-----YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 247 (313)
T ss_dssp GGGEEEETTTEEEECCCGGGSCTTSCTT-----SEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCS
T ss_pred cceEEEcCCCCEEEcccccccccccccc-----ceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCC
Confidence 9999999999999999999987643321 111223457889999999988899999999999999999999 9999
Q ss_pred CCCCccCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCH
Q 011508 377 TNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNM 456 (484)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~ 456 (484)
|....... ......... .... .+..++..+.+++.+||+.||.+|||+
T Consensus 248 ~~~~~~~~-~~~~~~~~~--------~~~~-----------------------~~~~~~~~l~~li~~~l~~dp~~Rps~ 295 (313)
T 1t46_A 248 YPGMPVDS-KFYKMIKEG--------FRML-----------------------SPEHAPAEMYDIMKTCWDADPLKRPTF 295 (313)
T ss_dssp STTCCSSH-HHHHHHHHT--------CCCC-----------------------CCTTSCHHHHHHHHHHTCSSGGGSCCH
T ss_pred CCcccchh-HHHHHhccC--------CCCC-----------------------CcccCCHHHHHHHHHHcCCCchhCcCH
Confidence 97643221 111111110 0000 012235678999999999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 011508 457 EEVAAQLLSFRNKL 470 (484)
Q Consensus 457 ~evl~~L~~i~~~~ 470 (484)
.|+++.|+++....
T Consensus 296 ~ell~~L~~~~~~~ 309 (313)
T 1t46_A 296 KQIVQLIEKQISES 309 (313)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999887654
No 75
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=9.7e-45 Score=365.08 Aligned_cols=262 Identities=25% Similarity=0.443 Sum_probs=208.7
Q ss_pred HHHhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccC
Q 011508 154 LFKATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQ 233 (484)
Q Consensus 154 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 233 (484)
+....++|.+.+.||+|+||.||+|.+. .+..||||+++... ...+.+.+|+.++++++||||+++++++.
T Consensus 183 ~~i~~~~~~~~~~lG~G~fg~V~~~~~~---~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~----- 253 (454)
T 1qcf_A 183 WEIPRESLKLEKKLGAGQFGEVWMATYN---KHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT----- 253 (454)
T ss_dssp SBCCGGGEEEEEEEECCSSEEEEEEEET---TTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-----
T ss_pred eeechHHeEEEEEcccCCceEEEEEEEC---CccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-----
Confidence 3345567889999999999999999975 35779999997543 34678999999999999999999999853
Q ss_pred CCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcc
Q 011508 234 GNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSD 313 (484)
Q Consensus 234 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~D 313 (484)
....++||||+++|+|.++++... ...+++..++.++.||+.||+||| +++|+||||||+|||++.++.+||+|
T Consensus 254 -~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~D 327 (454)
T 1qcf_A 254 -KEPIYIITEFMAKGSLLDFLKSDE--GSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIAD 327 (454)
T ss_dssp -SSSCEEEECCCTTCBHHHHHHSHH--HHTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTCCEEECS
T ss_pred -CCccEEEEeecCCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEECCCCcEEEee
Confidence 336799999999999999997432 124788999999999999999999 88999999999999999999999999
Q ss_pred cCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHH
Q 011508 314 FGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVK 392 (484)
Q Consensus 314 fg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~ 392 (484)
||+++....... .......++..|+|||++....++.++|||||||++|||+| |+.||...... +...
T Consensus 328 FG~a~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~-----~~~~ 396 (454)
T 1qcf_A 328 FGLARVIEDNEY------TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP-----EVIR 396 (454)
T ss_dssp TTGGGGBCCHHH------HTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-----HHHH
T ss_pred CCCceEcCCCce------eccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH-----HHHH
Confidence 999987643221 11122346788999999988899999999999999999999 99999753211 1111
Q ss_pred hhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHHH
Q 011508 393 EALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRNK 469 (484)
Q Consensus 393 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~ 469 (484)
.. ..-.. + ..+..|+.++.+++.+||+.||++|||+++|++.|+.+...
T Consensus 397 ~i-----~~~~~--~---------------------~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~ 445 (454)
T 1qcf_A 397 AL-----ERGYR--M---------------------PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTA 445 (454)
T ss_dssp HH-----HHTCC--C---------------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSS
T ss_pred HH-----HcCCC--C---------------------CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhc
Confidence 00 00000 0 00233467899999999999999999999999999887543
No 76
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=5.2e-44 Score=347.30 Aligned_cols=278 Identities=21% Similarity=0.274 Sum_probs=204.7
Q ss_pred cCCCCccCccccccceeEEEEEEcC-CCCeeEEEEEEeeccCcc-----------chHHHHHHHHHHHcCCCCCceeEee
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDH-DDHETLVAVKVLNLQHRG-----------ASKSFIAECQALRSIRHRNLVKIIT 225 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~~~~vavK~~~~~~~~-----------~~~~~~~e~~~l~~l~h~niv~~~~ 225 (484)
.++|.+.+.||+|+||.||+|+... ...+..+|+|++...... ....+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 3679999999999999999999643 124678999998755321 1134678889999999999999999
Q ss_pred eeeeeccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecC
Q 011508 226 SCVSVDFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDG 305 (484)
Q Consensus 226 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~ 305 (484)
++... +.+....++||||+ +++|.+++.... .+++.+++.++.||+.||+||| +++|+||||||+||+++.
T Consensus 116 ~~~~~-~~~~~~~~lv~e~~-~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~ 186 (345)
T 2v62_A 116 SGLTE-FKGRSYRFMVMERL-GIDLQKISGQNG----TFKKSTVLQLGIRMLDVLEYIH---ENEYVHGDIKAANLLLGY 186 (345)
T ss_dssp EEEEE-SSSCEEEEEEEECE-EEEHHHHCBGGG----BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEES
T ss_pred ccccc-cCCCcEEEEEEecc-CCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCcCHHHEEEcc
Confidence 87653 24466889999999 999999997543 5899999999999999999999 889999999999999998
Q ss_pred CC--ceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccC
Q 011508 306 EL--TAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTG 383 (484)
Q Consensus 306 ~~--~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~ 383 (484)
++ .+||+|||+++.+..................||..|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 187 ~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~ 266 (345)
T 2v62_A 187 KNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKD 266 (345)
T ss_dssp SSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTC
T ss_pred CCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccc
Confidence 87 9999999999877544322221222224457999999999999989999999999999999999999999653222
Q ss_pred CccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHH
Q 011508 384 NLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQL 463 (484)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 463 (484)
.......... ....+...+.... ....++.++.+++..||+.||++|||++||++.|
T Consensus 267 ~~~~~~~~~~-~~~~~~~~~~~~~----------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L 323 (345)
T 2v62_A 267 PVAVQTAKTN-LLDELPQSVLKWA----------------------PSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKIL 323 (345)
T ss_dssp HHHHHHHHHH-HHHTTTHHHHHHS----------------------CTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHH
T ss_pred cHHHHHHHHh-hcccccHHHHhhc----------------------cccccHHHHHHHHHHHhhcCcccCCCHHHHHHHH
Confidence 2111111111 1111110000000 0112356799999999999999999999999999
Q ss_pred HHHH
Q 011508 464 LSFR 467 (484)
Q Consensus 464 ~~i~ 467 (484)
+.+.
T Consensus 324 ~~~~ 327 (345)
T 2v62_A 324 NPHG 327 (345)
T ss_dssp CTTC
T ss_pred hccC
Confidence 8754
No 77
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=3.6e-43 Score=335.98 Aligned_cols=282 Identities=24% Similarity=0.274 Sum_probs=201.5
Q ss_pred hcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc-----cchHHHHHHHHHHHcC---CCCCceeEeeeee
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR-----GASKSFIAECQALRSI---RHRNLVKIITSCV 228 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l---~h~niv~~~~~~~ 228 (484)
..++|++.+.||+|+||+||+|+ +..+++.||+|++..... .....+.+|+.+++++ +||||+++++++.
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~--~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~ 84 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKAR--DPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCA 84 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEE--CTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEE
T ss_pred cccceEEEEEEecCCCeEEEEEE--ECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeee
Confidence 45789999999999999999998 555688999999874331 2235677788877776 4999999999986
Q ss_pred eeccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCc
Q 011508 229 SVDFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELT 308 (484)
Q Consensus 229 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~ 308 (484)
..........++||||+. ++|.+++.... ...+++..++.++.|++.||+||| +++|+||||||+||+++.++.
T Consensus 85 ~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~--~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~ 158 (308)
T 3g33_A 85 TSRTDREIKVTLVFEHVD-QDLRTYLDKAP--PPGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGT 158 (308)
T ss_dssp ECCSSSEEEEEEEEECCC-CBHHHHHHTCC--TTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCTTTEEECTTSC
T ss_pred ccCCCCceeEEEEehhhh-cCHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCC
Confidence 654333446799999995 69999997543 234899999999999999999999 899999999999999999999
Q ss_pred eEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHh
Q 011508 309 AHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLH 388 (484)
Q Consensus 309 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~ 388 (484)
+||+|||++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||....... .+.
T Consensus 159 ~kl~Dfg~a~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~ 229 (308)
T 3g33_A 159 VKLADFGLARIYSYQ--------MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD-QLG 229 (308)
T ss_dssp EEECSCSCTTTSTTC--------CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHH-HHH
T ss_pred EEEeeCccccccCCC--------cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHH
Confidence 999999999865322 12234568999999999988899999999999999999999999997632211 111
Q ss_pred HHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 389 NFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 389 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
.............+ ....... .. . ..............++...+.+++.+||+.||++|||+.|+++
T Consensus 230 ~i~~~~~~~~~~~~-~~~~~~~-~~-~---~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 230 KIFDLIGLPPEDDW-PRDVSLP-RG-A---FPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp HHHHHHCCCCTTTS-CSSCSSC-GG-G---SCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHhCCCChhhc-cchhhcc-cc-c---cCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 11111100000000 0000000 00 0 0000000000001223567899999999999999999999985
No 78
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.7e-43 Score=336.57 Aligned_cols=252 Identities=23% Similarity=0.328 Sum_probs=193.9
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--------------------------cchHHHHHHHHH
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--------------------------GASKSFIAECQA 211 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--------------------------~~~~~~~~e~~~ 211 (484)
.++|++.+.||+|+||.||+|+. ..+++.||||++..... ...+.+.+|+++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~--~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~ 89 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYN--ENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAI 89 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEE--TTTTEEEEEEEEECC-------------------------------CHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEE--CCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHH
Confidence 46899999999999999999984 44678999999875431 113568899999
Q ss_pred HHcCCCCCceeEeeeeeeeccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCe
Q 011508 212 LRSIRHRNLVKIITSCVSVDFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPI 291 (484)
Q Consensus 212 l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i 291 (484)
+++++||||+++++++.. ......++||||+++++|.+++. ...+++..++.++.|++.||+||| +++|
T Consensus 90 l~~l~h~~iv~~~~~~~~---~~~~~~~lv~e~~~~~~l~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH---~~~i 158 (298)
T 2zv2_A 90 LKKLDHPNVVKLVEVLDD---PNEDHLYMVFELVNQGPVMEVPT-----LKPLSEDQARFYFQDLIKGIEYLH---YQKI 158 (298)
T ss_dssp HHTCCCTTBCCEEEEEEC---SSSSEEEEEEECCTTCBSCCSSC-----SSCCCHHHHHHHHHHHHHHHHHHH---HTTE
T ss_pred HHhCCCCCCCeEEEEEEc---CCCCEEEEEEecCCCCcHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHH---HCCe
Confidence 999999999999998643 23557899999999999987653 245899999999999999999999 8899
Q ss_pred eecCCCCCCeeecCCCceEEcccCcccccccccccCCCCccccccccccccccCccccCCCC---CCcccceehhhHHHH
Q 011508 292 VHCDLKPSNVLLDGELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSE---VSTSGDVYSFGILLL 368 (484)
Q Consensus 292 vH~dlk~~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~---~~~~~Dvws~Gvvl~ 368 (484)
+||||||+||+++.++.+||+|||++....... .......||+.|+|||.+.+.. ++.++|||||||++|
T Consensus 159 vH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~ 231 (298)
T 2zv2_A 159 IHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSD-------ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLY 231 (298)
T ss_dssp ECCCCCGGGEEECTTSCEEECCCTTCEECSSSS-------CEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHH
T ss_pred eccCCCHHHEEECCCCCEEEecCCCcccccccc-------ccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHH
Confidence 999999999999999999999999998764321 1122346999999999987755 478899999999999
Q ss_pred HHHhCCCCCCCCccCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCC
Q 011508 369 EMFTGKGPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSE 448 (484)
Q Consensus 369 elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~ 448 (484)
||++|+.||.... .......... ..... +. ...++..+.+++.+||+.
T Consensus 232 ~l~~g~~pf~~~~-----~~~~~~~~~~--------~~~~~-~~------------------~~~~~~~l~~li~~~l~~ 279 (298)
T 2zv2_A 232 CFVFGQCPFMDER-----IMCLHSKIKS--------QALEF-PD------------------QPDIAEDLKDLITRMLDK 279 (298)
T ss_dssp HHHHSSCSSCCSS-----HHHHHHHHHH--------CCCCC-CS------------------SSCCCHHHHHHHHHHTCS
T ss_pred HHHHCCCCCCCcc-----HHHHHHHHhc--------ccCCC-CC------------------ccccCHHHHHHHHHHhhc
Confidence 9999999997531 1111111000 00000 00 011255789999999999
Q ss_pred CcCCCCCHHHHHH
Q 011508 449 LPRERMNMEEVAA 461 (484)
Q Consensus 449 dP~~RPt~~evl~ 461 (484)
||++|||+.|+++
T Consensus 280 dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 280 NPESRIVVPEIKL 292 (298)
T ss_dssp CTTTSCCHHHHTT
T ss_pred ChhhCCCHHHHhc
Confidence 9999999999875
No 79
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=1.2e-43 Score=337.78 Aligned_cols=267 Identities=24% Similarity=0.405 Sum_probs=204.8
Q ss_pred CCCCccCccccccceeEEEEEEcCC-CCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCc
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHD-DHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
.+|.+.+.||+|+||.||+|+.... .....+|+|.+..... ...+.+.+|+.++++++||||++++++|. ..+.
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----~~~~ 100 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICL----RSEG 100 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEC----CSSS
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEE----cCCC
Confidence 4688889999999999999986533 2345689998875433 33467899999999999999999999863 4455
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCc
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGL 316 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 316 (484)
..++||||+++|+|.+++... ...+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||+
T Consensus 101 ~~~~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~ql~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~ 174 (298)
T 3f66_A 101 SPLVVLPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGL 174 (298)
T ss_dssp CCEEEEECCTTCBHHHHHHCT---TCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSCGG
T ss_pred ceEEEEeCCCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEECCCCCEEECcccc
Confidence 779999999999999999742 345899999999999999999999 89999999999999999999999999999
Q ss_pred ccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhhc
Q 011508 317 AKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEAL 395 (484)
Q Consensus 317 a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 395 (484)
+......... .........+|+.|+|||.+.+..++.++||||||+++|||++ |.+||....... ........
T Consensus 175 a~~~~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~--~~~~~~~~- 248 (298)
T 3f66_A 175 ARDMYDKEYY---SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD--ITVYLLQG- 248 (298)
T ss_dssp GCCCSCGGGC---BC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTT--HHHHHHTT-
T ss_pred cccccccchh---ccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHH--HHHHHhcC-
Confidence 9876443211 1122234457889999999988899999999999999999999 555554432111 11111100
Q ss_pred chhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHHHHh
Q 011508 396 PERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRNKLV 471 (484)
Q Consensus 396 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~~ 471 (484)
.. ...+..++..+.+++..||+.||++|||+.|+++.|+++...+.
T Consensus 249 ----------~~--------------------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~ 294 (298)
T 3f66_A 249 ----------RR--------------------LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 294 (298)
T ss_dssp ----------CC--------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSC
T ss_pred ----------CC--------------------CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence 00 00012235678999999999999999999999999999877653
No 80
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=1.4e-43 Score=339.19 Aligned_cols=269 Identities=22% Similarity=0.310 Sum_probs=200.6
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCC
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQG 234 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 234 (484)
.++|++.+.||+|+||.||+|... .+++.||+|++.... ......+.+|+.++++++||||+++++++..
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~----- 103 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACL--LDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIE----- 103 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEET--TTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-----
T ss_pred ccceEEEEeecCCCCceEEEEEEc--CCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEc-----
Confidence 357899999999999999999853 357889999997532 2234678899999999999999999998653
Q ss_pred CceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEccc
Q 011508 235 NDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDF 314 (484)
Q Consensus 235 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 314 (484)
++..++||||+++++|.+++.........+++..++.++.|++.||+||| +.+++||||||+||+++.++.+||+||
T Consensus 104 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIl~~~~~~~kl~Df 180 (310)
T 2wqm_A 104 DNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDL 180 (310)
T ss_dssp TTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCC
T ss_pred CCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCcHHHEEEcCCCCEEEEec
Confidence 34789999999999999999765444556899999999999999999999 899999999999999999999999999
Q ss_pred CcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhh
Q 011508 315 GLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEA 394 (484)
Q Consensus 315 g~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 394 (484)
|++....... .......++..|+|||.+.+..++.++||||||+++|+|++|+.||.........+...+..
T Consensus 181 g~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~- 252 (310)
T 2wqm_A 181 GLGRFFSSKT-------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQ- 252 (310)
T ss_dssp -------------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHT-
T ss_pred cceeeecCCC-------ccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhc-
Confidence 9987653321 11223468999999999999999999999999999999999999996532211111111100
Q ss_pred cchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHHHHhhc
Q 011508 395 LPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRNKLVKN 473 (484)
Q Consensus 395 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~~~~ 473 (484)
...+.. ....++.++.+++..||+.||++|||+.||++.|+++++.....
T Consensus 253 -------~~~~~~----------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~~ 302 (310)
T 2wqm_A 253 -------CDYPPL----------------------PSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASS 302 (310)
T ss_dssp -------TCSCCC----------------------CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC--
T ss_pred -------ccCCCC----------------------cccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhhh
Confidence 000000 01123567899999999999999999999999999998876543
No 81
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-43 Score=338.99 Aligned_cols=245 Identities=26% Similarity=0.327 Sum_probs=199.5
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
++|++.+.||+|+||.||+|+. ..+++.||+|+++... ....+.+.+|..+++.++||||+++++++ .+.
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~--~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~-----~~~ 78 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRS--RHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTF-----QDA 78 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEE--TTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEE-----ECS
T ss_pred HHcEEEEEEeeCCCEEEEEEEE--CCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEE-----EeC
Confidence 5688999999999999999984 4467899999997542 23446788999999999999999999985 445
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
...++||||+++|+|.+++... ..+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||
T Consensus 79 ~~~~lv~e~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~Dfg 151 (318)
T 1fot_A 79 QQIFMIMDYIEGGELFSLLRKS----QRFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFG 151 (318)
T ss_dssp SEEEEEECCCCSCBHHHHHHHT----SSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTSCEEECCCS
T ss_pred CEEEEEEeCCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChheEEEcCCCCEEEeecC
Confidence 5889999999999999999753 35899999999999999999999 9999999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhc
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEAL 395 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 395 (484)
+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||..... .....
T Consensus 152 ~a~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-----~~~~~--- 213 (318)
T 1fot_A 152 FAKYVPDV----------TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT-----MKTYE--- 213 (318)
T ss_dssp SCEECSSC----------BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHHH---
T ss_pred cceecCCc----------cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH-----HHHHH---
Confidence 99865321 1235699999999999999999999999999999999999999975311 11111
Q ss_pred chhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCC-----CHHHHHH
Q 011508 396 PERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERM-----NMEEVAA 461 (484)
Q Consensus 396 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~ 461 (484)
.+....+.. +.....++.+++.+||+.||++|| +++|+++
T Consensus 214 -----~i~~~~~~~---------------------p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 214 -----KILNAELRF---------------------PPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp -----HHHHCCCCC---------------------CTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred -----HHHhCCCCC---------------------CCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 111111100 111245688999999999999999 8888874
No 82
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=2.2e-43 Score=338.71 Aligned_cols=282 Identities=24% Similarity=0.323 Sum_probs=189.1
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCc
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
.++|++.+.||+|+||.||+|. +..+++.||+|+++.... ...+.+.+|++++++++||||+++++++ ..++
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~ 76 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGL--NKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVI-----HTEN 76 (317)
T ss_dssp ---------------CEEEEEE--CSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEE-----CCTT
T ss_pred ccceeEeeEECCCCCEEEEEEE--ECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEE-----EECC
Confidence 4679999999999999999998 455678999999975543 3346788999999999999999999985 4455
Q ss_pred eeeEEeecccCCCHHHHHhhcC--CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEccc
Q 011508 237 FEALVYELMVNGSLEEWLHLNR--DAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDF 314 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 314 (484)
..++||||++ |+|.+++.... .....+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+||
T Consensus 77 ~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Df 152 (317)
T 2pmi_A 77 KLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDF 152 (317)
T ss_dssp EEEEEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCC
T ss_pred eEEEEEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCChHHeEEcCCCCEEECcC
Confidence 8899999997 69999987543 22345899999999999999999999 899999999999999999999999999
Q ss_pred CcccccccccccCCCCccccccccccccccCccccCC-CCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHh
Q 011508 315 GLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKE 393 (484)
Q Consensus 315 g~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 393 (484)
|++....... .......+|+.|+|||++.+ ..++.++|||||||++|||++|+.||....... .+......
T Consensus 153 g~~~~~~~~~-------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~ 224 (317)
T 2pmi_A 153 GLARAFGIPV-------NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEE-QLKLIFDI 224 (317)
T ss_dssp SSCEETTSCC-------CCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHH
T ss_pred ccceecCCCc-------ccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHH
Confidence 9998663221 11223468999999999876 468999999999999999999999997642211 11111111
Q ss_pred hc--chhhhhhcCc--ccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 394 AL--PERLAEIVDP--VLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 394 ~~--~~~~~~~~d~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
.. ++.....+.. ............... ..........+..++.+++.+||+.||++|||++|+++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 225 MGTPNESLWPSVTKLPKYNPNIQQRPPRDLR---QVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp HCSCCTTTCGGGGGCTTCCTTCCCCCCCCSH---HHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hCCCChhHhhhhhhhhhcccccccccchhHH---HhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 00 0000000000 000000000000000 00000001123567899999999999999999999975
No 83
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=2.5e-43 Score=345.06 Aligned_cols=250 Identities=26% Similarity=0.378 Sum_probs=198.7
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
++|.+.+.||+|+||.||+|.. ..+++.||+|++.... ......+.+|+++++.++||||+++++++ ...
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~--~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~-----~~~ 87 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQK--NDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSF-----QDE 87 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEE--TTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEE-----ECS
T ss_pred HHeEEEEEEeeCCCeEEEEEEE--CCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEE-----EeC
Confidence 5689999999999999999984 4467899999987532 33456788999999999999999999985 345
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
...++||||+.+|+|.+++... ..+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||
T Consensus 88 ~~~~lv~e~~~gg~L~~~l~~~----~~l~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG 160 (384)
T 4fr4_A 88 EDMFMVVDLLLGGDLRYHLQQN----VHFKEETVKLFICELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFN 160 (384)
T ss_dssp SEEEEEECCCTTEEHHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCT
T ss_pred CEEEEEEecCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEECCCCCEEEeccc
Confidence 5889999999999999999742 35899999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCC---CCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHH
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG---SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVK 392 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~---~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 392 (484)
++...... .......||+.|+|||++.. ..++.++|||||||++|||++|+.||....... ......
T Consensus 161 ~a~~~~~~--------~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~--~~~~~~ 230 (384)
T 4fr4_A 161 IAAMLPRE--------TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTS--SKEIVH 230 (384)
T ss_dssp TCEECCTT--------CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSC--HHHHHH
T ss_pred eeeeccCC--------CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCcc--HHHHHH
Confidence 99876322 12234579999999999864 458999999999999999999999997532221 111111
Q ss_pred hhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCC-HHHHHH
Q 011508 393 EALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMN-MEEVAA 461 (484)
Q Consensus 393 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-~~evl~ 461 (484)
... ...... +..++..+.+++.+||+.||++||+ +++|.+
T Consensus 231 ~~~--------~~~~~~---------------------p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 231 TFE--------TTVVTY---------------------PSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp HHH--------HCCCCC---------------------CTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred HHh--------hcccCC---------------------CCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 100 000000 1223567899999999999999998 666653
No 84
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=1.7e-43 Score=335.54 Aligned_cols=278 Identities=19% Similarity=0.231 Sum_probs=198.0
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCc
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
++|++.+.||+|+||+||+|+.. .+++.||+|++..... .....+.+|+.++++++||||+++++++. .+.
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~ 74 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNR--ETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLH-----SDK 74 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEET--TTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEE-----ETT
T ss_pred CCceeeeEecCCCCeEEEEEEEC--CCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEE-----eCC
Confidence 47899999999999999999954 4578899999975543 23467889999999999999999999964 345
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCc
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGL 316 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 316 (484)
..++||||+++ ++.+++... ...+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||+
T Consensus 75 ~~~lv~e~~~~-~l~~~~~~~---~~~l~~~~~~~~~~ql~~~l~~lH---~~~ivH~dikp~Nil~~~~~~~kl~Dfg~ 147 (292)
T 3o0g_A 75 KLTLVFEFCDQ-DLKKYFDSC---NGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGL 147 (292)
T ss_dssp EEEEEEECCSE-EHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred EEEEEEecCCC-CHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeeccc
Confidence 88999999965 666666532 245899999999999999999999 88999999999999999999999999999
Q ss_pred ccccccccccCCCCccccccccccccccCccccCCCC-CCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhc
Q 011508 317 AKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSE-VSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEAL 395 (484)
Q Consensus 317 a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 395 (484)
+....... .......||..|+|||++.+.. ++.++|||||||++|||++|..||.........+........
T Consensus 148 ~~~~~~~~-------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~ 220 (292)
T 3o0g_A 148 ARAFGIPV-------RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLG 220 (292)
T ss_dssp CEECCSCC-------SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHC
T ss_pred ceecCCcc-------ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhC
Confidence 98663221 1223346899999999987765 799999999999999999988886443222111222211111
Q ss_pred chhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 396 PERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 396 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
...... ... ............... ..........+...+.+++.+||+.||++|||++|+++
T Consensus 221 ~~~~~~-~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 221 TPTEEQ-WPS-MTKLPDYKPYPMYPA--TTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp CCCTTT-CTT-GGGSTTCCCCCCCCT--TCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCChhh-hhh-hcccccccccccccC--CcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 100000 000 000000000000000 00000001233567889999999999999999999975
No 85
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.6e-43 Score=333.51 Aligned_cols=271 Identities=24% Similarity=0.374 Sum_probs=211.9
Q ss_pred cCCCCccC-ccccccceeEEEEEEcCCCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 158 TDGFSLEN-LIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 158 ~~~~~~~~-~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
.++|.+.+ .||+|+||.||+|++.....+..||+|+++.... ...+.+.+|++++++++||||+++++++. .
T Consensus 8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~------~ 81 (287)
T 1u59_A 8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ------A 81 (287)
T ss_dssp GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE------S
T ss_pred HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEec------C
Confidence 34566666 8999999999999876666778899999976432 34467899999999999999999999862 2
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
+..++||||+++++|.+++... ...+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||
T Consensus 82 ~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~Dfg 155 (287)
T 1u59_A 82 EALMLVMEMAGGGPLHKFLVGK---REEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFG 155 (287)
T ss_dssp SSEEEEEECCTTEEHHHHHTTC---TTTSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEEETTEEEECCCT
T ss_pred CCcEEEEEeCCCCCHHHHHHhC---CccCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCchheEEEcCCCCEEECccc
Confidence 3579999999999999999632 345899999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhh
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEA 394 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~ 394 (484)
++......... ........+|+.|+|||++.+..++.++||||||+++|||++ |+.||...... .....+...
T Consensus 156 ~~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~i~~~ 229 (287)
T 1u59_A 156 LSKALGADDSY----YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--EVMAFIEQG 229 (287)
T ss_dssp TCEECTTCSCE----ECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH--HHHHHHHTT
T ss_pred ceeeeccCcce----eeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH--HHHHHHhcC
Confidence 99876432211 111223346889999999988889999999999999999998 99999753211 111111100
Q ss_pred cchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHHHHhhcc
Q 011508 395 LPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRNKLVKNV 474 (484)
Q Consensus 395 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~~~~~ 474 (484)
.... .+..++..+.+++..||+.||++||++.|+++.|+.+..+.....
T Consensus 230 --------~~~~-----------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~~ 278 (287)
T 1u59_A 230 --------KRME-----------------------CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKV 278 (287)
T ss_dssp --------CCCC-----------------------CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTTC
T ss_pred --------CcCC-----------------------CCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCcc
Confidence 0000 012336678999999999999999999999999999988876555
Q ss_pred CCC
Q 011508 475 RGQ 477 (484)
Q Consensus 475 ~~~ 477 (484)
...
T Consensus 279 ~~~ 281 (287)
T 1u59_A 279 EGH 281 (287)
T ss_dssp SSC
T ss_pred cCC
Confidence 443
No 86
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=1e-43 Score=341.08 Aligned_cols=278 Identities=22% Similarity=0.309 Sum_probs=216.2
Q ss_pred ccHHhHHHhcCCCCccCccccccceeEEEEEEc---CCCCeeEEEEEEeeccCcc-chHHHHHHHHHHHcC-CCCCceeE
Q 011508 149 VSYQNLFKATDGFSLENLIGAGSFGSVYKGIFD---HDDHETLVAVKVLNLQHRG-ASKSFIAECQALRSI-RHRNLVKI 223 (484)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~---~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l-~h~niv~~ 223 (484)
+....+....++|++.+.||+|+||.||+|++. +..+++.||+|+++..... ..+.+.+|+.++.++ +||||+++
T Consensus 17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 96 (316)
T 2xir_A 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 96 (316)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence 444455556688999999999999999999864 2346789999999765432 335788999999999 79999999
Q ss_pred eeeeeeeccCCCceeeEEeecccCCCHHHHHhhcCCC------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCe
Q 011508 224 ITSCVSVDFQGNDFEALVYELMVNGSLEEWLHLNRDA------------PRNLNLLQRLSIAVDVASTLEYLHHYCETPI 291 (484)
Q Consensus 224 ~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i 291 (484)
++++. ..+...++||||+++++|.+++...... ...+++..++.++.|++.||+||| +++|
T Consensus 97 ~~~~~----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i 169 (316)
T 2xir_A 97 LGACT----KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKC 169 (316)
T ss_dssp EEEEC----CTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHH---HTTC
T ss_pred EEEEe----cCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHH---hCCc
Confidence 99863 3344689999999999999999854321 123889999999999999999999 8999
Q ss_pred eecCCCCCCeeecCCCceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHH
Q 011508 292 VHCDLKPSNVLLDGELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMF 371 (484)
Q Consensus 292 vH~dlk~~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ell 371 (484)
+||||||+||+++.++.+||+|||++........ ........+|+.|+|||++.+..++.++||||||+++|||+
T Consensus 170 ~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-----~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~ 244 (316)
T 2xir_A 170 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPD-----YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 244 (316)
T ss_dssp CCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTT-----SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred ccccCccceEEECCCCCEEECCCccccccccCcc-----ceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHH
Confidence 9999999999999999999999999986643221 11222345788999999998889999999999999999999
Q ss_pred h-CCCCCCCCccCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCc
Q 011508 372 T-GKGPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELP 450 (484)
Q Consensus 372 t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP 450 (484)
| |+.||........ +....... ..... +..++..+.+++..||+.||
T Consensus 245 t~g~~p~~~~~~~~~-~~~~~~~~--------~~~~~-----------------------~~~~~~~l~~li~~~l~~dp 292 (316)
T 2xir_A 245 SLGASPYPGVKIDEE-FCRRLKEG--------TRMRA-----------------------PDYTTPEMYQTMLDCWHGEP 292 (316)
T ss_dssp TTSCCSSTTCCCSHH-HHHHHHHT--------CCCCC-----------------------CTTCCHHHHHHHHHHTCSSG
T ss_pred hCCCCCCcccchhHH-HHHHhccC--------ccCCC-----------------------CCCCCHHHHHHHHHHcCCCh
Confidence 8 9999976432211 11111100 00000 11125578999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHH
Q 011508 451 RERMNMEEVAAQLLSFRNKL 470 (484)
Q Consensus 451 ~~RPt~~evl~~L~~i~~~~ 470 (484)
.+|||+.||++.|+.+.+..
T Consensus 293 ~~Rps~~ell~~L~~~~~~~ 312 (316)
T 2xir_A 293 SQRPTFSELVEHLGNLLQAN 312 (316)
T ss_dssp GGSCCHHHHHHHHHHHHHHH
T ss_pred hhCcCHHHHHHHHHHHHhhh
Confidence 99999999999999987654
No 87
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=2.3e-43 Score=346.46 Aligned_cols=254 Identities=18% Similarity=0.235 Sum_probs=201.8
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
.++|++.+.||+|+||.||+|+.. .+++.||+|++..........+.+|+.++++++||||+++++++. ....
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~--~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~-----~~~~ 122 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEK--ATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE-----DKYE 122 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEET--TTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEE-----CSSE
T ss_pred ccceEEEEEEecCCCEEEEEEEEC--CCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEE-----eCCE
Confidence 357999999999999999999854 467899999998665445567899999999999999999999853 4558
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecC--CCceEEcccC
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDG--ELTAHVSDFG 315 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~--~~~~kl~Dfg 315 (484)
.++||||+++|+|.+++... ...+++..++.++.||+.||+||| +++|+||||||+||+++. ++.+||+|||
T Consensus 123 ~~lv~E~~~gg~L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~vkL~DFG 196 (387)
T 1kob_A 123 MVLILEFLSGGELFDRIAAE---DYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFG 196 (387)
T ss_dssp EEEEEECCCCCBHHHHTTCT---TCCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTCCCEEECCCT
T ss_pred EEEEEEcCCCCcHHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccchHHeEEecCCCCceEEEecc
Confidence 89999999999999998632 335899999999999999999999 899999999999999974 4689999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhc
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEAL 395 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 395 (484)
++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..... .......
T Consensus 197 ~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~-----~~~~~~i- 262 (387)
T 1kob_A 197 LATKLNPDE--------IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD-----LETLQNV- 262 (387)
T ss_dssp TCEECCTTS--------CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH-----HHHHHHH-
T ss_pred cceecCCCc--------ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCH-----HHHHHHH-
Confidence 998763321 12234689999999999999999999999999999999999999975321 1111100
Q ss_pred chhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 396 PERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 396 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
......... .....++.++.+++..||+.||++|||+.|+++.
T Consensus 263 -------~~~~~~~~~-----------------~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 263 -------KRCDWEFDE-----------------DAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp -------HHCCCCCCS-----------------STTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred -------HhCCCCCCc-----------------cccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 000000000 0011235678999999999999999999999863
No 88
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=1.3e-43 Score=335.80 Aligned_cols=261 Identities=28% Similarity=0.417 Sum_probs=194.0
Q ss_pred hcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCC
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQG 234 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 234 (484)
..++|++.+.||+|+||.||+|+.. ..||+|+++.... ...+.+.+|+.++++++||||+++++++ .
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~~~~~-----~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~------~ 90 (289)
T 3og7_A 22 PDGQITVGQRIGSGSFGTVYKGKWH-----GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS------T 90 (289)
T ss_dssp CTTSCEEEEEEEECSSEEEEEEESS-----SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE------C
T ss_pred CccceeeeeEecCCCCeEEEEEEEc-----CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec------c
Confidence 4568999999999999999999843 3499999875543 2346789999999999999999999864 2
Q ss_pred CceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEccc
Q 011508 235 NDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDF 314 (484)
Q Consensus 235 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 314 (484)
....++||||+++++|.+++... ...+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+||
T Consensus 91 ~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Df 164 (289)
T 3og7_A 91 APQLAIVTQWCEGSSLYHHLHAS---ETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDF 164 (289)
T ss_dssp SSSCEEEEECCCEEEHHHHHTTC------CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEEEECCC
T ss_pred CCccEEEEEecCCCcHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHH---hCCcccccCccceEEECCCCCEEEccc
Confidence 33578999999999999999633 345899999999999999999999 899999999999999999999999999
Q ss_pred CcccccccccccCCCCccccccccccccccCccccC---CCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHH
Q 011508 315 GLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGM---GSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFV 391 (484)
Q Consensus 315 g~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 391 (484)
|++........ ........||..|+|||.+. +..++.++||||||+++|||++|+.||....... .+...+
T Consensus 165 g~~~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~~~~ 238 (289)
T 3og7_A 165 GLATEKSRWSG-----SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD-QIIEMV 238 (289)
T ss_dssp C-----------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHH-HHHHHH
T ss_pred eeccccccccc-----cccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHH-HHHHHh
Confidence 99976533211 11122346899999999886 5678899999999999999999999997642211 111111
Q ss_pred HhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHH
Q 011508 392 KEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFR 467 (484)
Q Consensus 392 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~ 467 (484)
... ...+.+.. ....++..+.+++..||+.||++|||+.|+++.|+++.
T Consensus 239 ~~~-------~~~~~~~~--------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~ 287 (289)
T 3og7_A 239 GRG-------SLSPDLSK--------------------VRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA 287 (289)
T ss_dssp HHT-------SCCCCTTS--------------------SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred ccc-------ccCcchhh--------------------ccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence 100 00000000 01234667999999999999999999999999998864
No 89
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=4e-44 Score=347.91 Aligned_cols=250 Identities=25% Similarity=0.318 Sum_probs=196.2
Q ss_pred hcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcC-CCCCceeEeeeeeeecc
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSI-RHRNLVKIITSCVSVDF 232 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 232 (484)
..++|++.+.||+|+||.||+|+.. .+++.||+|+++... ....+.+.+|..++..+ +||||+++++++
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~--~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~----- 93 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVK--ETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCF----- 93 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEET--TTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEE-----
T ss_pred chhheEEEEEEeeCCCEEEEEEEEc--CCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEE-----
Confidence 3468999999999999999999954 457899999997542 23446688999999988 799999999985
Q ss_pred CCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEc
Q 011508 233 QGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVS 312 (484)
Q Consensus 233 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~ 312 (484)
......++||||+++|+|.+++.... .+++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+
T Consensus 94 ~~~~~~~lv~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NILl~~~g~ikL~ 166 (353)
T 3txo_A 94 QTPDRLFFVMEFVNGGDLMFHIQKSR----RFDEARARFYAAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLA 166 (353)
T ss_dssp ECSSEEEEEEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEEC
T ss_pred EeCCEEEEEEeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCCcccCCCHHHEEECCCCCEEEc
Confidence 44558999999999999999997543 4899999999999999999999 8999999999999999999999999
Q ss_pred ccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHH
Q 011508 313 DFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVK 392 (484)
Q Consensus 313 Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 392 (484)
|||+++..... .......+||+.|+|||++.+..++.++|||||||++|||++|+.||...... +...
T Consensus 167 DFG~a~~~~~~-------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~-----~~~~ 234 (353)
T 3txo_A 167 DFGMCKEGICN-------GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENED-----DLFE 234 (353)
T ss_dssp CCTTCBCSCC----------------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHH
T ss_pred cccceeecccC-------CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHH-----HHHH
Confidence 99999754221 12223457999999999998888999999999999999999999999753211 1111
Q ss_pred hhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCH------HHHHH
Q 011508 393 EALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNM------EEVAA 461 (484)
Q Consensus 393 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~------~evl~ 461 (484)
. +....... +......+.+++.+||+.||++||++ +|+++
T Consensus 235 ~--------i~~~~~~~---------------------p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 235 A--------ILNDEVVY---------------------PTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp H--------HHHCCCCC---------------------CTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred H--------HHcCCCCC---------------------CCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 1 11100000 11124568899999999999999998 67764
No 90
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=2.8e-43 Score=351.71 Aligned_cols=253 Identities=20% Similarity=0.270 Sum_probs=199.2
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
.++|++.+.||+|+||.||+|.. ..++..+|+|++..... ...+.+.+|+.++++++||||+++++++ ..+
T Consensus 10 ~~~Y~i~~~LG~G~fg~V~~~~~--~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~-----~~~ 82 (444)
T 3soa_A 10 TEEYQLFEELGKGAFSVVRRCVK--VLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSI-----SEE 82 (444)
T ss_dssp HHHEEEEEEEEEC--CEEEEEEE--TTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEE-----ECS
T ss_pred cCCeEEEEEeccCCCeEEEEEEE--CCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEE-----EEC
Confidence 46799999999999999999984 44678999999976542 2345688999999999999999999985 445
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeec---CCCceEEc
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLD---GELTAHVS 312 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~---~~~~~kl~ 312 (484)
+..++||||+++|+|.+++... ..+++..+..++.||+.||+||| +++|+||||||+||+++ .++.+||+
T Consensus 83 ~~~~lv~E~~~gg~L~~~i~~~----~~~~e~~~~~i~~qil~aL~~lH---~~givHrDlKp~NIll~~~~~~~~vkL~ 155 (444)
T 3soa_A 83 GHHYLIFDLVTGGELFEDIVAR----EYYSEADASHCIQQILEAVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLA 155 (444)
T ss_dssp SEEEEEECCCBCCBHHHHHHHC----SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSSTTEEESBSSTTCCEEEC
T ss_pred CEEEEEEEeCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEeccCCCCcEEEc
Confidence 5889999999999999999753 34899999999999999999999 89999999999999998 45789999
Q ss_pred ccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHH
Q 011508 313 DFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVK 392 (484)
Q Consensus 313 Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 392 (484)
|||++....... .......||+.|+|||++.+..++.++||||+||++|+|++|+.||..... .....
T Consensus 156 DFG~a~~~~~~~-------~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~-----~~~~~ 223 (444)
T 3soa_A 156 DFGLAIEVEGEQ-------QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ-----HRLYQ 223 (444)
T ss_dssp CCSSCBCCCTTC-------CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHHH
T ss_pred cCceeEEecCCC-------ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccH-----HHHHH
Confidence 999997664321 122345799999999999999999999999999999999999999965321 11111
Q ss_pred hhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 393 EALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 393 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
..... ......+. ...++.++.+++..||+.||++|||+.|+++
T Consensus 224 ~i~~~-~~~~~~~~------------------------~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 224 QIKAG-AYDFPSPE------------------------WDTVTPEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp HHHHT-CCCCCTTT------------------------TTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHhC-CCCCCccc------------------------cccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 10000 00000000 1123567899999999999999999999986
No 91
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=1.4e-43 Score=336.09 Aligned_cols=268 Identities=26% Similarity=0.394 Sum_probs=209.5
Q ss_pred hcCCCCccC-ccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccC
Q 011508 157 ATDGFSLEN-LIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQ 233 (484)
Q Consensus 157 ~~~~~~~~~-~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 233 (484)
..++|.+.+ .||+|+||.||+|.+.....+..||||+++.... ...+.+.+|+++++.++||||+++++++.
T Consensus 14 ~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----- 88 (291)
T 1xbb_A 14 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE----- 88 (291)
T ss_dssp CGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEE-----
T ss_pred cchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEC-----
Confidence 345678887 9999999999999876777789999999975432 22467899999999999999999999861
Q ss_pred CCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcc
Q 011508 234 GNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSD 313 (484)
Q Consensus 234 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~D 313 (484)
.+..++||||+++++|.+++... ..+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|
T Consensus 89 -~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~D 160 (291)
T 1xbb_A 89 -AESWMLVMEMAELGPLNKYLQQN----RHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISD 160 (291)
T ss_dssp -SSSEEEEEECCTTEEHHHHHHHC----TTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECC
T ss_pred -CCCcEEEEEeCCCCCHHHHHHhC----cCCCHHHHHHHHHHHHHHHHHHH---hCCeEcCCCCcceEEEeCCCcEEEcc
Confidence 23678999999999999999753 34899999999999999999999 88999999999999999999999999
Q ss_pred cCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHH
Q 011508 314 FGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVK 392 (484)
Q Consensus 314 fg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~ 392 (484)
||++......... ........++..|+|||.+.+..++.++||||||+++|||++ |+.||...... .....+.
T Consensus 161 fg~~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~~~ 234 (291)
T 1xbb_A 161 FGLSKALRADENY----YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--EVTAMLE 234 (291)
T ss_dssp CTTCEECCTTCSE----EEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHHHHH
T ss_pred CCcceeeccCCCc----ccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHH
Confidence 9999876433211 111122346788999999988889999999999999999999 99999753211 1111111
Q ss_pred hhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHHHHhh
Q 011508 393 EALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRNKLVK 472 (484)
Q Consensus 393 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~~~ 472 (484)
.. .... .+..++..+.+++..||+.||++|||+.||++.|+.+-.....
T Consensus 235 ~~--------~~~~-----------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~ 283 (291)
T 1xbb_A 235 KG--------ERMG-----------------------CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVN 283 (291)
T ss_dssp TT--------CCCC-----------------------CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHHH
T ss_pred cC--------CCCC-----------------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhh
Confidence 00 0000 0122366789999999999999999999999999998777654
Q ss_pred cc
Q 011508 473 NV 474 (484)
Q Consensus 473 ~~ 474 (484)
..
T Consensus 284 ~~ 285 (291)
T 1xbb_A 284 EG 285 (291)
T ss_dssp HH
T ss_pred cc
Confidence 43
No 92
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=3.3e-43 Score=336.53 Aligned_cols=276 Identities=24% Similarity=0.303 Sum_probs=199.0
Q ss_pred hcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCC
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQG 234 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 234 (484)
..++|++.+.||+|+||+||+|+.. +++.||+|++..... .....+.+|++++++++||||+++++++ ..
T Consensus 19 l~~~y~~~~~lG~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~ 90 (311)
T 3niz_A 19 LMEKYQKLEKVGEGTYGVVYKAKDS---QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI-----HS 90 (311)
T ss_dssp SSCEEEEEEEEEECSSCEEEEEEET---TSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEE-----CC
T ss_pred hHhhhHhhhhccCCCCeEEEEEEEC---CCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEE-----cc
Confidence 3478999999999999999999864 478899999875432 2346788999999999999999999985 44
Q ss_pred CceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEccc
Q 011508 235 NDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDF 314 (484)
Q Consensus 235 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 314 (484)
+...++||||++ ++|.+++... ...+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+||
T Consensus 91 ~~~~~lv~e~~~-~~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Df 163 (311)
T 3niz_A 91 ERCLTLVFEFME-KDLKKVLDEN---KTGLQDSQIKIYLYQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADF 163 (311)
T ss_dssp SSCEEEEEECCS-EEHHHHHHTC---TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCC
T ss_pred CCEEEEEEcCCC-CCHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCchHhEEECCCCCEEEccC
Confidence 558899999996 5888888643 345899999999999999999999 899999999999999999999999999
Q ss_pred CcccccccccccCCCCccccccccccccccCccccCC-CCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHh
Q 011508 315 GLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKE 393 (484)
Q Consensus 315 g~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 393 (484)
|++....... .......+|+.|+|||++.+ ..++.++||||+||++|+|++|+.||....... .+......
T Consensus 164 g~a~~~~~~~-------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~ 235 (311)
T 3niz_A 164 GLARAFGIPV-------RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD-QLPKIFSI 235 (311)
T ss_dssp TTCEETTSCC-------C---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTT-HHHHHHHH
T ss_pred cCceecCCCc-------ccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHH
Confidence 9998653221 11223468999999998876 568999999999999999999999997653332 12222111
Q ss_pred hc---chhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 394 AL---PERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 394 ~~---~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
.. +.......+............ . ..........+..++.+++.+||+.||++|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 236 LGTPNPREWPQVQELPLWKQRTFQVF-E-----KKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp HCCCCTTTSGGGTTSHHHHSCCCCCC-C-----CCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HCCCChHHhhhhhccchhhhcccccc-c-----CCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 11 100111100000000000000 0 00000001223567899999999999999999999985
No 93
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=2.1e-43 Score=338.96 Aligned_cols=274 Identities=22% Similarity=0.273 Sum_probs=197.1
Q ss_pred cCCCCcc-CccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcC-CCCCceeEeeeeeeeccCCC
Q 011508 158 TDGFSLE-NLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSI-RHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 158 ~~~~~~~-~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~ 235 (484)
.+.|.+. +.||+|+||.||+|+ +..+++.||||++..........+.+|++++.++ +||||+++++++.. +
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~--~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~-----~ 83 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCI--NLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEE-----E 83 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEE--CSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-----T
T ss_pred ceeEEecCceecCCceEEEEEEE--EcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEee-----C
Confidence 3568874 789999999999998 4556789999999876655667899999999985 79999999999643 4
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCc---eEEc
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELT---AHVS 312 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~---~kl~ 312 (484)
+..++||||+++++|.+++.... .+++..++.++.|++.||+||| +++|+||||||+||+++.++. +||+
T Consensus 84 ~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~~~kl~ 156 (316)
T 2ac3_A 84 DRFYLVFEKMRGGSILSHIHKRR----HFNELEASVVVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKIC 156 (316)
T ss_dssp TEEEEEEECCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESCSSSSCSEEEC
T ss_pred CEEEEEEEcCCCCcHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEEccCCCcCceEEE
Confidence 58899999999999999997543 4899999999999999999999 889999999999999988775 9999
Q ss_pred ccCcccccccccccCCCCccccccccccccccCccccCC-----CCCCcccceehhhHHHHHHHhCCCCCCCCccCCccH
Q 011508 313 DFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-----SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTL 387 (484)
Q Consensus 313 Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-----~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~ 387 (484)
|||++.....................||..|+|||++.. ..++.++|||||||++|||++|+.||.........+
T Consensus 157 Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~ 236 (316)
T 2ac3_A 157 DFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGW 236 (316)
T ss_dssp CTTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC
T ss_pred EccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccc
Confidence 999988664322111111112233569999999998764 458899999999999999999999997653322111
Q ss_pred hHHHH-hhcchh-hhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 388 HNFVK-EALPER-LAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 388 ~~~~~-~~~~~~-~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
..... ...... ...+........ . .....++..+.+++.+||+.||++|||+.|+++.
T Consensus 237 ~~~~~~~~~~~~~~~~i~~~~~~~~--------------~---~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 237 DRGEACPACQNMLFESIQEGKYEFP--------------D---KDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp ----CCHHHHHHHHHHHHHCCCCCC--------------H---HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred cccccchhHHHHHHHHHhccCcccC--------------c---hhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 00000 000000 001110000000 0 0011235678999999999999999999999873
No 94
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=2.5e-43 Score=344.03 Aligned_cols=253 Identities=22% Similarity=0.327 Sum_probs=200.0
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
.++|++.+.||+|+||.||+|+. ..++..||+|++..... ...+.+.+|+.++++++||||+++++++. .+
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~--~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~-----~~ 100 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVH--KTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQ-----EE 100 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEE--TTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-----CS
T ss_pred ccCeEEeeEEecCCCeEEEEEEE--CCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEE-----eC
Confidence 45799999999999999999984 44678999999975532 23457889999999999999999999853 45
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCC---ceEEc
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGEL---TAHVS 312 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~---~~kl~ 312 (484)
...++||||+++|+|.+++... ..+++..++.++.||+.||+||| +++|+||||||+||+++.++ .+||+
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~ 173 (362)
T 2bdw_A 101 SFHYLVFDLVTGGELFEDIVAR----EFYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLA 173 (362)
T ss_dssp SEEEEEECCCCSCBHHHHHTTC----SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEESCSSTTCCEEEC
T ss_pred CEEEEEEecCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEe
Confidence 5889999999999999998732 35899999999999999999999 89999999999999997654 59999
Q ss_pred ccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHH
Q 011508 313 DFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVK 392 (484)
Q Consensus 313 Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 392 (484)
|||++....... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||..... .....
T Consensus 174 DfG~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~-----~~~~~ 240 (362)
T 2bdw_A 174 DFGLAIEVNDSE--------AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ-----HRLYA 240 (362)
T ss_dssp CCTTCBCCTTCC--------SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHH
T ss_pred ecCcceEecCCc--------ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-----HHHHH
Confidence 999998664221 12235699999999999998999999999999999999999999975321 11111
Q ss_pred hhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 393 EALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 393 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
..... ..+ .. ......++.++.+++.+||+.||++|||+.|+++.
T Consensus 241 ~i~~~----~~~----~~-----------------~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 241 QIKAG----AYD----YP-----------------SPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp HHHHT----CCC----CC-----------------TTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred HHHhC----CCC----CC-----------------cccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 10000 000 00 00012235678999999999999999999998754
No 95
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=7.1e-44 Score=341.34 Aligned_cols=265 Identities=22% Similarity=0.346 Sum_probs=196.2
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccc---hHHHHHHHHHHHcCCCCCceeEeeeeeeeccCC
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGA---SKSFIAECQALRSIRHRNLVKIITSCVSVDFQG 234 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 234 (484)
.++|++.+.||+|+||.||+|+. ..+++.||||+++...... ...+.+|+.++++++||||+++++++.... ..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 87 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARD--LRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAET-PA 87 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEE--TTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEE-TT
T ss_pred cCcEEEEEEEccCCCEEEEEEEE--CCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccC-CC
Confidence 46799999999999999999984 4467899999997653322 356889999999999999999999876543 22
Q ss_pred CceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEccc
Q 011508 235 NDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDF 314 (484)
Q Consensus 235 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 314 (484)
....++||||+++++|.+++.... .+++.+++.++.|++.||+||| +++|+||||||+||+++.++.+||+||
T Consensus 88 ~~~~~lv~e~~~g~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Df 160 (311)
T 3ork_A 88 GPLPYIVMEYVDGVTLRDIVHTEG----PMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDF 160 (311)
T ss_dssp EEEEEEEEECCCEEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEETTSCEEECCC
T ss_pred CcccEEEEecCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEcCCCCEEEeec
Confidence 335599999999999999997543 4899999999999999999999 899999999999999999999999999
Q ss_pred CcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhh
Q 011508 315 GLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEA 394 (484)
Q Consensus 315 g~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 394 (484)
|++......... ........||+.|+|||++.+..++.++||||||+++|||++|+.||....... .....
T Consensus 161 g~a~~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~-----~~~~~ 231 (311)
T 3ork_A 161 GIARAIADSGNS----VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS-----VAYQH 231 (311)
T ss_dssp SCC----------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH-----HHHHH
T ss_pred cCcccccccccc----cccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH-----HHHHH
Confidence 999876443211 112223568999999999999999999999999999999999999997532111 11100
Q ss_pred cchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH-HHHHH
Q 011508 395 LPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA-QLLSF 466 (484)
Q Consensus 395 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~-~L~~i 466 (484)
.... ...+. .....++..+.+++.+||+.||++||++.+++. .+..+
T Consensus 232 ~~~~---~~~~~----------------------~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 279 (311)
T 3ork_A 232 VRED---PIPPS----------------------ARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279 (311)
T ss_dssp HHCC---CCCHH----------------------HHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred hcCC---CCCcc----------------------cccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence 0000 00000 001123567899999999999999997766554 44433
No 96
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=2.2e-43 Score=332.98 Aligned_cols=263 Identities=21% Similarity=0.369 Sum_probs=205.9
Q ss_pred hcCCCCccCccccccceeEEEEEEcCC-CCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCC
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHD-DHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQG 234 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 234 (484)
..++|.+.+.||+|+||.||+|++... ..+..||+|++..... ...+.+.+|+.++++++||||+++++++. .
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~ 84 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIE-----E 84 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEEC-----S
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEc-----C
Confidence 346789999999999999999987533 3466799999876532 34467899999999999999999999852 2
Q ss_pred CceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEccc
Q 011508 235 NDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDF 314 (484)
Q Consensus 235 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 314 (484)
+..++||||+++++|.+++.... ..+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+||
T Consensus 85 -~~~~~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Df 157 (281)
T 3cc6_A 85 -EPTWIIMELYPYGELGHYLERNK---NSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDF 157 (281)
T ss_dssp -SSCEEEEECCTTCBHHHHHHHHT---TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEEETTEEEECCC
T ss_pred -CCCEEEEecCCCCCHHHHHHhcc---ccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEECCCCcEEeCcc
Confidence 24589999999999999997543 35899999999999999999999 899999999999999999999999999
Q ss_pred CcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHh
Q 011508 315 GLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKE 393 (484)
Q Consensus 315 g~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~ 393 (484)
|++........ .......++..|+|||.+.+..++.++||||||+++|||++ |+.||...... .....+..
T Consensus 158 g~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~--~~~~~~~~ 229 (281)
T 3cc6_A 158 GLSRYIEDEDY------YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK--DVIGVLEK 229 (281)
T ss_dssp CGGGCC---------------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGG--GHHHHHHH
T ss_pred CCCcccccccc------cccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChH--HHHHHHhc
Confidence 99987643221 11123457889999999988889999999999999999998 99999653221 11111110
Q ss_pred hcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHHHH
Q 011508 394 ALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRNKL 470 (484)
Q Consensus 394 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~ 470 (484)
.. . .. .+..++..+.+++.+||+.||++|||+.|+++.|+.+.+.-
T Consensus 230 ~~--------~--~~---------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~ 275 (281)
T 3cc6_A 230 GD--------R--LP---------------------KPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQME 275 (281)
T ss_dssp TC--------C--CC---------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CC--------C--CC---------------------CCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhh
Confidence 00 0 00 01123567899999999999999999999999999987653
No 97
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=7.3e-44 Score=362.07 Aligned_cols=258 Identities=24% Similarity=0.431 Sum_probs=208.1
Q ss_pred hcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCc
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
...+|++.+.||+|+||.||+|++.. ++..||||+++... ...+.+.+|+.++++++||||++++++|. ...
T Consensus 218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~--~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~-----~~~ 289 (495)
T 1opk_A 218 ERTDITMKHKLGGGQYGEVYEGVWKK--YSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCT-----REP 289 (495)
T ss_dssp CGGGEEEEEESGGGTTSSEEEEEEGG--GTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-----SSS
T ss_pred CHHHceeeeEecCCCCeEEEEEEEcC--CCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEe-----cCC
Confidence 44568889999999999999999653 46889999997543 34578999999999999999999999964 344
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCc
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGL 316 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 316 (484)
..++||||+++|+|.+++.... ...+++..++.++.||+.||+||| +++|+||||||+|||++.++.+||+|||+
T Consensus 290 ~~~lv~E~~~~g~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~ 364 (495)
T 1opk_A 290 PFYIITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGL 364 (495)
T ss_dssp SCEEEEECCTTCBHHHHHHHSC--TTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCEEECCTTC
T ss_pred cEEEEEEccCCCCHHHHHHhcC--cCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChhhEEECCCCcEEEeeccc
Confidence 7899999999999999997543 245899999999999999999999 89999999999999999999999999999
Q ss_pred ccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhhc
Q 011508 317 AKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEAL 395 (484)
Q Consensus 317 a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 395 (484)
++...... ........++..|+|||++....++.++|||||||++|||+| |+.||...... .+...+..
T Consensus 365 a~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~--~~~~~~~~-- 434 (495)
T 1opk_A 365 SRLMTGDT------YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLEK-- 434 (495)
T ss_dssp EECCTTCC------EECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHHHHHT--
T ss_pred ceeccCCc------eeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHc--
Confidence 98764321 111223346789999999988899999999999999999999 99999764221 11111110
Q ss_pred chhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHH
Q 011508 396 PERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSF 466 (484)
Q Consensus 396 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i 466 (484)
.... ..+..|+..+.+|+..||+.||++|||+.||++.|+.+
T Consensus 435 ----------~~~~-------------------~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~ 476 (495)
T 1opk_A 435 ----------DYRM-------------------ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 476 (495)
T ss_dssp ----------TCCC-------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred ----------CCCC-------------------CCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence 0000 01234467889999999999999999999999999875
No 98
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.1e-43 Score=366.91 Aligned_cols=266 Identities=24% Similarity=0.365 Sum_probs=207.7
Q ss_pred CCccC-ccccccceeEEEEEEcCCCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCcee
Q 011508 161 FSLEN-LIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFE 238 (484)
Q Consensus 161 ~~~~~-~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 238 (484)
+.+.+ .||+|+||.||+|.+.....+..||||+++.... ...+.+.+|+++|++++||||++++++|.. +..
T Consensus 337 ~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~------~~~ 410 (613)
T 2ozo_A 337 LLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA------EAL 410 (613)
T ss_dssp EEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES------SSE
T ss_pred eeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc------CCe
Confidence 33334 7999999999999987666778899999976532 345789999999999999999999998632 257
Q ss_pred eEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccc
Q 011508 239 ALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAK 318 (484)
Q Consensus 239 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~ 318 (484)
++||||+++|+|.+++... ...+++..++.++.||+.||+||| +++|+||||||+|||++.++.+||+|||+++
T Consensus 411 ~lv~E~~~~g~L~~~l~~~---~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiHrDlkp~NILl~~~~~vkL~DFGla~ 484 (613)
T 2ozo_A 411 MLVMEMAGGGPLHKFLVGK---REEIPVSNVAELLHQVSMGMKYLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSK 484 (613)
T ss_dssp EEEEECCTTCBHHHHHTTC---TTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCSTTT
T ss_pred EEEEEeCCCCcHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCcCCHHHEEEcCCCcEEEeeccCcc
Confidence 9999999999999999743 345899999999999999999999 8999999999999999999999999999998
Q ss_pred ccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhhcch
Q 011508 319 FLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEALPE 397 (484)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 397 (484)
........ ........+++.|+|||++.+..++.++|||||||++|||++ |+.||...... .+...+....
T Consensus 485 ~~~~~~~~----~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--~~~~~i~~~~-- 556 (613)
T 2ozo_A 485 ALGADDSY----YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--EVMAFIEQGK-- 556 (613)
T ss_dssp TCC------------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH--HHHHHHHTTC--
T ss_pred cccCCCce----eeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH--HHHHHHHcCC--
Confidence 76432211 111122345689999999988899999999999999999998 99999764221 1111111000
Q ss_pred hhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHHHHhhccC
Q 011508 398 RLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRNKLVKNVR 475 (484)
Q Consensus 398 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~~~~~~ 475 (484)
.+ ..+..|+.++.+++..||+.||++||++.+|++.|+.+.........
T Consensus 557 --------~~---------------------~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~~~~~ 605 (613)
T 2ozo_A 557 --------RM---------------------ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKVE 605 (613)
T ss_dssp --------CC---------------------CCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHSCSCC
T ss_pred --------CC---------------------CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhccccC
Confidence 00 01234567899999999999999999999999999998877754443
No 99
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=2.2e-43 Score=348.64 Aligned_cols=289 Identities=16% Similarity=0.189 Sum_probs=204.4
Q ss_pred hcCCCCccCccccc--cceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCCCCceeEeeeeeeecc
Q 011508 157 ATDGFSLENLIGAG--SFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIRHRNLVKIITSCVSVDF 232 (484)
Q Consensus 157 ~~~~~~~~~~lg~G--~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 232 (484)
..++|++.+.||+| +||.||+|+.. .+++.||||+++.... ...+.+.+|+.++++++||||+++++++..
T Consensus 23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--- 97 (389)
T 3gni_B 23 EGGCYELLTVIGKGFEDLMTVNLARYK--PTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIA--- 97 (389)
T ss_dssp CGGGEEEEEEEEEETTTTEEEEEEEET--TTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE---
T ss_pred CCCcEEEEecccCCcCCceEEEEEEEc--CCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEE---
Confidence 34679999999999 99999999954 4678999999976532 234678889999999999999999999643
Q ss_pred CCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEc
Q 011508 233 QGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVS 312 (484)
Q Consensus 233 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~ 312 (484)
+...++||||+++|+|.+++.... ...+++..++.++.||+.||+||| +++|+||||||+|||++.++.+||+
T Consensus 98 --~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~kl~ 170 (389)
T 3gni_B 98 --DNELWVVTSFMAYGSAKDLICTHF--MDGMNELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLS 170 (389)
T ss_dssp --TTEEEEEEECCTTCBHHHHHHHTC--TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEEC
T ss_pred --CCEEEEEEEccCCCCHHHHHhhhc--ccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEc
Confidence 458899999999999999997543 235899999999999999999999 8999999999999999999999999
Q ss_pred ccCcccccccccccCCCCccccccccccccccCccccCC--CCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHH
Q 011508 313 DFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG--SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNF 390 (484)
Q Consensus 313 Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~ 390 (484)
|||.+.....................||..|+|||++.+ ..++.++|||||||++|||++|+.||......... ...
T Consensus 171 dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~-~~~ 249 (389)
T 3gni_B 171 GLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQML-LEK 249 (389)
T ss_dssp CGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHH-HHC
T ss_pred ccccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHH-HHH
Confidence 999987653322111111222233468999999999887 57899999999999999999999999764332211 111
Q ss_pred HHhhcchhhhhhcCcccccc------cc---------ccc--chhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCC
Q 011508 391 VKEALPERLAEIVDPVLLVE------RE---------EGE--TSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRER 453 (484)
Q Consensus 391 ~~~~~~~~~~~~~d~~l~~~------~~---------~~~--~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R 453 (484)
.....+ .+.+...... .. ... ...............+..+...+.+|+.+||+.||++|
T Consensus 250 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R 325 (389)
T 3gni_B 250 LNGTVP----CLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDAR 325 (389)
T ss_dssp ------------------------------------------------------------CCHHHHHHHHHHTCSCTTTS
T ss_pred hcCCCC----ccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccC
Confidence 111111 0000000000 00 000 00000000000000123346679999999999999999
Q ss_pred CCHHHHHHH
Q 011508 454 MNMEEVAAQ 462 (484)
Q Consensus 454 Pt~~evl~~ 462 (484)
||+.|+++.
T Consensus 326 pta~ell~h 334 (389)
T 3gni_B 326 PSASTLLNH 334 (389)
T ss_dssp CCHHHHTTS
T ss_pred CCHHHHhcC
Confidence 999999854
No 100
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=5.6e-44 Score=340.63 Aligned_cols=277 Identities=26% Similarity=0.361 Sum_probs=206.1
Q ss_pred CCCCccCccccccceeEEEEEEc--CCCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFD--HDDHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~--~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
..|++.+.||+|+||.||+|++. +..+++.||+|++..... ...+.+.+|++++++++||||+++++++... +.
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~ 97 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTED---GG 97 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC------
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecC---CC
Confidence 45788899999999999999863 334678999999975432 3447789999999999999999999987532 23
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
...++||||+++++|.+++.... ..+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||
T Consensus 98 ~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg 171 (302)
T 4e5w_A 98 NGIKLIMEFLPSGSLKEYLPKNK---NKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFG 171 (302)
T ss_dssp CCEEEEEECCTTCBHHHHHHHHT---TTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCT
T ss_pred ceEEEEEEeCCCCcHHHHHHhcc---ccCCHHHHHHHHHHHHHHHHHhh---cCCcccCCCchheEEEcCCCCEEECccc
Confidence 56789999999999999996543 34899999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhc
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEAL 395 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 395 (484)
++......... ........+|..|+|||.+.+..++.++||||||+++|||+||..|+...... .........
T Consensus 172 ~~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~~ 244 (302)
T 4e5w_A 172 LTKAIETDKEY----YTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMAL---FLKMIGPTH 244 (302)
T ss_dssp TCEECCTTCCE----EECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHH---HHHHHCSCC
T ss_pred ccccccCCCcc----eeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhH---HhhccCCcc
Confidence 99876433211 11223345888899999998888999999999999999999999986432100 000000000
Q ss_pred chh-hhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHH
Q 011508 396 PER-LAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFR 467 (484)
Q Consensus 396 ~~~-~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~ 467 (484)
... ...+... +. .......+..++..+.+++.+||+.||.+|||+.|+++.|+.+.
T Consensus 245 ~~~~~~~~~~~-~~---------------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 245 GQMTVTRLVNT-LK---------------EGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp GGGHHHHHHHH-HH---------------TTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cccCHHHHHHH-Hh---------------ccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 000 0000000 00 00000012334678999999999999999999999999999874
No 101
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.8e-43 Score=339.45 Aligned_cols=278 Identities=25% Similarity=0.390 Sum_probs=212.3
Q ss_pred CCCCccCccccccceeEEEEEEc--CCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCc
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFD--HDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~--~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
++|++.+.||+|+||.||+|++. +..+++.||+|++........+.+.+|++++++++||||+++++++... +..
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~~~ 117 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA---GRR 117 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC-------
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEec---CCC
Confidence 56888999999999999999863 2346789999999876555567899999999999999999999986432 234
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCc
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGL 316 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 316 (484)
..++||||+++++|.+++.... ..+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||+
T Consensus 118 ~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kL~Dfg~ 191 (326)
T 2w1i_A 118 NLKLIMEYLPYGSLRDYLQKHK---ERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGL 191 (326)
T ss_dssp CCEEEECCCTTCBHHHHHHHST---TSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTT
T ss_pred ceEEEEECCCCCCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCCCcceEEEcCCCcEEEecCcc
Confidence 6789999999999999997542 35899999999999999999999 89999999999999999999999999999
Q ss_pred ccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcc
Q 011508 317 AKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALP 396 (484)
Q Consensus 317 a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 396 (484)
+......... ........++..|+|||.+.+..++.++||||||+++|||+||..||...... ..........
T Consensus 192 ~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~---~~~~~~~~~~ 264 (326)
T 2w1i_A 192 TKVLPQDKEY----YKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE---FMRMIGNDKQ 264 (326)
T ss_dssp CEECCSSCSE----EECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHH---HHHHHCTTCC
T ss_pred hhhccccccc----cccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHH---HHHhhccccc
Confidence 9876433211 01112245778899999998888999999999999999999999987542100 0000000000
Q ss_pred -----hhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHHHHh
Q 011508 397 -----ERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRNKLV 471 (484)
Q Consensus 397 -----~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~~ 471 (484)
..+.+.+.... +...+..++.++.+++..||+.||++|||+.||++.|+.+++++.
T Consensus 265 ~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~l~ 325 (326)
T 2w1i_A 265 GQMIVFHLIELLKNNG-------------------RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQMA 325 (326)
T ss_dssp THHHHHHHHHHHHTTC-------------------CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHhhcCC-------------------CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhc
Confidence 00011110000 000123346789999999999999999999999999999998763
No 102
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.8e-43 Score=332.42 Aligned_cols=269 Identities=24% Similarity=0.372 Sum_probs=207.4
Q ss_pred CCCccCccccccceeEEEEEEcCC-CCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHD-DHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
.|.+.+.||+|+||.||+|++... ..+..||+|++..... ...+.+.+|+.++++++||||+++++++.. .+..
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----~~~~ 97 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLP----PEGL 97 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECC----SSSC
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEec----CCCC
Confidence 456678999999999999986543 3345799999875433 334678899999999999999999998632 3344
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
.++||||+.+|+|.+++... ...+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||++
T Consensus 98 ~~~v~e~~~~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~ 171 (298)
T 3pls_A 98 PHVLLPYMCHGDLLQFIRSP---QRNPTVKDLISFGLQVARGMEYLA---EQKFVHRDLAARNCMLDESFTVKVADFGLA 171 (298)
T ss_dssp CEEEECCCTTCBHHHHHHCT---TCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECCTTSS
T ss_pred cEEEEecccCCCHHHHHhcc---ccCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEeCcCCCc
Confidence 58999999999999999742 345899999999999999999999 889999999999999999999999999999
Q ss_pred cccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcch
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPE 397 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 397 (484)
......... .........++..|+|||.+.+..++.++||||||+++|+|++|..|+...... ......+.....
T Consensus 172 ~~~~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~-~~~~~~~~~~~~- 246 (298)
T 3pls_A 172 RDILDREYY---SVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP-FDLTHFLAQGRR- 246 (298)
T ss_dssp CTTTTGGGG---CSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCG-GGHHHHHHTTCC-
T ss_pred ccccCCccc---ccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCH-HHHHHHhhcCCC-
Confidence 866433211 111223346889999999999999999999999999999999966654332111 111111111000
Q ss_pred hhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHHHHhhc
Q 011508 398 RLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRNKLVKN 473 (484)
Q Consensus 398 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~~~~ 473 (484)
. ..+..++..+.+++..||+.||.+|||++|+++.|+++..++...
T Consensus 247 -------~-----------------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~~ 292 (298)
T 3pls_A 247 -------L-----------------------PQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGD 292 (298)
T ss_dssp -------C-----------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCSC
T ss_pred -------C-----------------------CCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhcc
Confidence 0 001223567899999999999999999999999999998877543
No 103
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=1.6e-43 Score=343.99 Aligned_cols=252 Identities=24% Similarity=0.290 Sum_probs=185.9
Q ss_pred hcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCc
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
..++|++.+.||+|+||.||+|+.. .+++.||||+++... ..+.+.+|++++++++||||+++++++. ...
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~--~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~-----~~~ 121 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQK--GTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFE-----TPT 121 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEET--TTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEE-----CSS
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEEC--CCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEe-----cCC
Confidence 3567999999999999999999954 456889999997543 3456889999999999999999999964 345
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecC---CCceEEcc
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDG---ELTAHVSD 313 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~---~~~~kl~D 313 (484)
..++||||+++|+|.+++... ..+++.+++.++.|++.||+||| +.+|+||||||+||+++. ++.+||+|
T Consensus 122 ~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIll~~~~~~~~~kl~D 194 (349)
T 2w4o_A 122 EISLVLELVTGGELFDRIVEK----GYYSERDAADAVKQILEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIAD 194 (349)
T ss_dssp EEEEEECCCCSCBHHHHHTTC----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESSSSTTCCEEECC
T ss_pred eEEEEEEeCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCcccEEEecCCCCCCEEEcc
Confidence 789999999999999999732 35899999999999999999999 889999999999999975 88999999
Q ss_pred cCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHh
Q 011508 314 FGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKE 393 (484)
Q Consensus 314 fg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 393 (484)
||+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.........+..
T Consensus 195 fg~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~---- 262 (349)
T 2w4o_A 195 FGLSKIVEHQV--------LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRR---- 262 (349)
T ss_dssp CC------------------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHH----
T ss_pred CccccccCccc--------ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHH----
Confidence 99998653221 122346899999999999999999999999999999999999999653221111111
Q ss_pred hcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 394 ALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 394 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
+......... ....+++.++.+++.+||+.||++|||+.|+++
T Consensus 263 --------i~~~~~~~~~-----------------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 263 --------ILNCEYYFIS-----------------PWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp --------HHTTCCCCCT-----------------TTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred --------HHhCCCccCC-----------------chhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1110000000 001123567899999999999999999999986
No 104
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=7.7e-44 Score=334.19 Aligned_cols=251 Identities=26% Similarity=0.387 Sum_probs=190.6
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc----cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccC
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR----GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQ 233 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 233 (484)
.++|++.+.||+|+||.||+|.+. +..||+|+++.... ...+.+.+|+++++.++||||+++++++.
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----- 76 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI----GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCL----- 76 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET----TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEEC-----
T ss_pred hhheeeeeeeccCCCeEEEEEEEc----CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEe-----
Confidence 367899999999999999999854 57899999875432 22467889999999999999999999964
Q ss_pred CCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC---eeecCCCCCCeeecC-----
Q 011508 234 GNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETP---IVHCDLKPSNVLLDG----- 305 (484)
Q Consensus 234 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~---ivH~dlk~~NIll~~----- 305 (484)
.+...++||||+++++|.+++. ...+++..++.++.|++.||+||| +++ |+||||||+||+++.
T Consensus 77 ~~~~~~lv~e~~~~~~L~~~~~-----~~~~~~~~~~~i~~~l~~~l~~lH---~~~~~~i~H~dikp~Nil~~~~~~~~ 148 (271)
T 3dtc_A 77 KEPNLCLVMEFARGGPLNRVLS-----GKRIPPDILVNWAVQIARGMNYLH---DEAIVPIIHRDLKSSNILILQKVENG 148 (271)
T ss_dssp CC--CEEEEECCTTEEHHHHHT-----SSCCCHHHHHHHHHHHHHHHHHHH---HSSSSCCCCSCCSGGGEEESSCCSSS
T ss_pred cCCceEEEEEcCCCCCHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHH---hCCCCceeecCCchHHEEEecccccc
Confidence 3457899999999999999986 235899999999999999999999 666 999999999999986
Q ss_pred ---CCceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCcc
Q 011508 306 ---ELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFT 382 (484)
Q Consensus 306 ---~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~ 382 (484)
++.+||+|||.+....... .....|++.|+|||.+.+..++.++||||||+++|+|++|+.||.....
T Consensus 149 ~~~~~~~kl~Dfg~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~ 219 (271)
T 3dtc_A 149 DLSNKILKITDFGLAREWHRTT---------KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDG 219 (271)
T ss_dssp CCSSCCEEECCCCC----------------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCH
T ss_pred cccCcceEEccCCccccccccc---------ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 6789999999998653321 1234689999999999888899999999999999999999999975321
Q ss_pred CCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 383 GNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
.. ... ......... ..+..++..+.+++.+||+.||++|||+.|+++.
T Consensus 220 ~~-----~~~--------~~~~~~~~~-------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 267 (271)
T 3dtc_A 220 LA-----VAY--------GVAMNKLAL-------------------PIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQ 267 (271)
T ss_dssp HH-----HHH--------HHHTSCCCC-------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HH-----HHH--------hhhcCCCCC-------------------CCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence 10 000 000000000 0012335678999999999999999999999999
Q ss_pred HHHH
Q 011508 463 LLSF 466 (484)
Q Consensus 463 L~~i 466 (484)
|+.+
T Consensus 268 L~~l 271 (271)
T 3dtc_A 268 LTTI 271 (271)
T ss_dssp HHC-
T ss_pred HhcC
Confidence 9754
No 105
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=9e-44 Score=346.64 Aligned_cols=277 Identities=15% Similarity=0.168 Sum_probs=209.9
Q ss_pred cCCCCccCccccccceeEEEEEEcCCC------CeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeE--------
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDD------HETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKI-------- 223 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~-------- 223 (484)
.++|.+.+.||+|+||.||+|+...+. .++.||+|++... +.+.+|++++++++||||+++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 368999999999999999999965421 3678999998744 467899999999999999883
Q ss_pred -------eeeeeeeccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCC
Q 011508 224 -------ITSCVSVDFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDL 296 (484)
Q Consensus 224 -------~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl 296 (484)
++++. ..+...++||||+ +++|.+++.... ...+++..++.++.||+.||+||| +++|+||||
T Consensus 116 ~~~i~~~~~~~~----~~~~~~~lv~e~~-~~~L~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Di 185 (352)
T 2jii_A 116 LLAIPTCMGFGV----HQDKYRFLVLPSL-GRSLQSALDVSP--KHVLSERSVLQVACRLLDALEFLH---ENEYVHGNV 185 (352)
T ss_dssp TCSCCCCCEEEE----ETTTEEEEEEECC-CEEHHHHHHHSG--GGCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCC
T ss_pred ccCccchhhccc----cCCcEEEEEecCC-CcCHHHHHHhCC--cCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCC
Confidence 44432 2356789999999 999999998542 245999999999999999999999 889999999
Q ss_pred CCCCeeecCCC--ceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCC
Q 011508 297 KPSNVLLDGEL--TAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGK 374 (484)
Q Consensus 297 k~~NIll~~~~--~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~ 374 (484)
||+||+++.++ .+||+|||+++.+..................||+.|+|||++.+..++.++|||||||++|||++|+
T Consensus 186 kp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~ 265 (352)
T 2jii_A 186 TAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGF 265 (352)
T ss_dssp CGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSC
T ss_pred CHHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCC
Confidence 99999999998 9999999999877554322222222223457999999999999989999999999999999999999
Q ss_pred CCCCCCccCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCC
Q 011508 375 GPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERM 454 (484)
Q Consensus 375 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP 454 (484)
.||.........+....... ......+.+.... ...++.++.+++..||+.||++||
T Consensus 266 ~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~----------------------~~~~~~~l~~li~~~l~~dp~~Rp 322 (352)
T 2jii_A 266 LPWTNCLPNTEDIMKQKQKF-VDKPGPFVGPCGH----------------------WIRPSETLQKYLKVVMALTYEEKP 322 (352)
T ss_dssp CTTGGGTTCHHHHHHHHHHH-HHSCCCEECTTSC----------------------EECCCHHHHHHHHHHHTCCTTCCC
T ss_pred CCcccCCcCHHHHHHHHHhc-cCChhhhhhhccc----------------------cCCCcHHHHHHHHHHHhCChhhCC
Confidence 99976432222221111110 1111111110000 111256789999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhh
Q 011508 455 NMEEVAAQLLSFRNKLVK 472 (484)
Q Consensus 455 t~~evl~~L~~i~~~~~~ 472 (484)
|++||++.|+++.+....
T Consensus 323 s~~~l~~~L~~~~~~~~~ 340 (352)
T 2jii_A 323 PYAMLRNNLEALLQDLRV 340 (352)
T ss_dssp CHHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHhcCC
Confidence 999999999999877643
No 106
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.2e-43 Score=335.99 Aligned_cols=263 Identities=24% Similarity=0.414 Sum_probs=211.3
Q ss_pred HhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 156 KATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 156 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
...++|++.+.||+|+||.||+|+.. .++..||+|++.... ...+.+.+|++++++++||||+++++++ ..+
T Consensus 10 ~~~~~~~~~~~lg~G~~g~V~~~~~~--~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~ 81 (288)
T 3kfa_A 10 MERTDITMKHKLGGGQYGEVYEGVWK--KYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVC-----TRE 81 (288)
T ss_dssp CCGGGEEEEEESGGGTTCSEEEEEEG--GGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEE-----CSS
T ss_pred ccccceeEEeecCCCCceeEEEeEec--CCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEE-----ccC
Confidence 45677899999999999999999954 357889999987543 3457889999999999999999999985 445
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
...++||||+++++|.+++.... ...+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||
T Consensus 82 ~~~~~v~e~~~~~~L~~~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg 156 (288)
T 3kfa_A 82 PPFYIITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFG 156 (288)
T ss_dssp SSEEEEEECCTTEEHHHHHHHCC--TTTSCHHHHHHHHHHHHHHHHHHH---HHTCCCSCCSGGGEEECGGGCEEECCCC
T ss_pred CCEEEEEEcCCCCcHHHHHHhcc--cCCccHhHHHHHHHHHHHHHHHHH---HCCccCCCCCcceEEEcCCCCEEEccCc
Confidence 57899999999999999997543 345899999999999999999999 8899999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhh
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEA 394 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~ 394 (484)
.+....... ........++..|+|||.+.+..++.++||||||+++|+|++ |..||...... ........
T Consensus 157 ~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~--~~~~~~~~- 227 (288)
T 3kfa_A 157 LSRLMTGDT------YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLEK- 227 (288)
T ss_dssp GGGTSCSSS------SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHHHHHT-
T ss_pred cceeccCCc------cccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHhc-
Confidence 998764321 122233457888999999988899999999999999999999 99998753211 11111110
Q ss_pred cchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHHHH
Q 011508 395 LPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRNKL 470 (484)
Q Consensus 395 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~ 470 (484)
.... ..+..++..+.+++..||+.||++|||+.|+++.|+.+....
T Consensus 228 -------~~~~-----------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~ 273 (288)
T 3kfa_A 228 -------DYRM-----------------------ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273 (288)
T ss_dssp -------TCCC-----------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred -------cCCC-----------------------CCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhc
Confidence 0000 002233567899999999999999999999999999887654
No 107
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=4.1e-43 Score=340.09 Aligned_cols=249 Identities=24% Similarity=0.324 Sum_probs=195.5
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc---cchHHHHHHHHHHHcC-CCCCceeEeeeeeeeccCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR---GASKSFIAECQALRSI-RHRNLVKIITSCVSVDFQG 234 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 234 (484)
++|++.+.||+|+||.||+|+.. .+++.||+|+++.... ...+.+.+|..++.++ +||||+++++++ ..
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~-----~~ 81 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLK--KTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCF-----QT 81 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEET--TTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEE-----EC
T ss_pred hheEEEEEEEecCCeEEEEEEEC--CCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEE-----Ee
Confidence 56889999999999999999954 4578999999986532 2335678899999988 899999999985 44
Q ss_pred CceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEccc
Q 011508 235 NDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDF 314 (484)
Q Consensus 235 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 314 (484)
....++||||+++|+|.+++.... .+++..++.++.||+.||+||| +++|+||||||+||+++.++.+||+||
T Consensus 82 ~~~~~lv~e~~~gg~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DF 154 (345)
T 3a8x_A 82 ESRLFFVIEYVNGGDLMFHMQRQR----KLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDY 154 (345)
T ss_dssp SSEEEEEECCCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCG
T ss_pred CCEEEEEEeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEEec
Confidence 558899999999999999997543 4899999999999999999999 899999999999999999999999999
Q ss_pred CcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCcc---HhHHH
Q 011508 315 GLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLT---LHNFV 391 (484)
Q Consensus 315 g~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~---~~~~~ 391 (484)
|+++..... ........||+.|+|||++.+..++.++|||||||++|||++|+.||......... .....
T Consensus 155 G~a~~~~~~-------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~ 227 (345)
T 3a8x_A 155 GMCKEGLRP-------GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL 227 (345)
T ss_dssp GGCBCSCCT-------TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHH
T ss_pred cccccccCC-------CCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHH
Confidence 999854221 11223457999999999999999999999999999999999999999653221100 00000
Q ss_pred HhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCH
Q 011508 392 KEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNM 456 (484)
Q Consensus 392 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~ 456 (484)
. ..+....... +..++.++.+++.+||+.||++||++
T Consensus 228 ~-------~~i~~~~~~~---------------------p~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 228 F-------QVILEKQIRI---------------------PRSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp H-------HHHHHCCCCC---------------------CTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred H-------HHHHcCCCCC---------------------CCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 0 0011100000 11225678899999999999999996
No 108
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1.4e-43 Score=349.97 Aligned_cols=260 Identities=20% Similarity=0.269 Sum_probs=203.1
Q ss_pred HhHHHhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcCCCCCceeEeeeee
Q 011508 152 QNLFKATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSIRHRNLVKIITSCV 228 (484)
Q Consensus 152 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~ 228 (484)
.++....++|++.+.||+|+||.||+|+.. .+++.||+|+++... ....+.+.+|+.+++.++||||+++++++
T Consensus 62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~--~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~- 138 (410)
T 3v8s_A 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHK--STRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAF- 138 (410)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEET--TTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEE-
T ss_pred HhcccCccccEEEEEEEcCCCEEEEEEEEC--CCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEE-
Confidence 445556788999999999999999999954 457899999997522 22335688999999999999999999985
Q ss_pred eeccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCc
Q 011508 229 SVDFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELT 308 (484)
Q Consensus 229 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~ 308 (484)
.++...++||||+++|+|.++++.. .+++..+..++.||+.||+||| +++|+||||||+|||++.++.
T Consensus 139 ----~~~~~~~lV~E~~~gg~L~~~l~~~-----~~~e~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ 206 (410)
T 3v8s_A 139 ----QDDRYLYMVMEYMPGGDLVNLMSNY-----DVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGH 206 (410)
T ss_dssp ----ECSSEEEEEECCCTTEEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSC
T ss_pred ----EECCEEEEEEeCCCCCcHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeeECCCCC
Confidence 4455899999999999999999743 3889999999999999999999 899999999999999999999
Q ss_pred eEEcccCcccccccccccCCCCccccccccccccccCccccCCCC----CCcccceehhhHHHHHHHhCCCCCCCCccCC
Q 011508 309 AHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSE----VSTSGDVYSFGILLLEMFTGKGPTNEMFTGN 384 (484)
Q Consensus 309 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~----~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~ 384 (484)
+||+|||+++...... .......+||+.|+|||++.+.. ++.++|||||||++|||++|+.||.....
T Consensus 207 ikL~DFG~a~~~~~~~------~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~-- 278 (410)
T 3v8s_A 207 LKLADFGTCMKMNKEG------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL-- 278 (410)
T ss_dssp EEECCCTTCEECCTTS------EEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSH--
T ss_pred EEEeccceeEeeccCC------cccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCCh--
Confidence 9999999998664321 11223457999999999987654 88999999999999999999999975321
Q ss_pred ccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCC--CCCHHHHHHH
Q 011508 385 LTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRE--RMNMEEVAAQ 462 (484)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPt~~evl~~ 462 (484)
........... ....-+. ...++.++.+|+.+||+.+|++ ||+++||++.
T Consensus 279 ---~~~~~~i~~~~-~~~~~p~------------------------~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 279 ---VGTYSKIMNHK-NSLTFPD------------------------DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp ---HHHHHHHHTHH-HHCCCCT------------------------TCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred ---hhHHHHHHhcc-ccccCCC------------------------cccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 11111111000 0000000 0112557889999999999998 9999999864
No 109
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=1.2e-43 Score=343.09 Aligned_cols=274 Identities=22% Similarity=0.331 Sum_probs=212.9
Q ss_pred HHhcCCCCccCccccccceeEEEEEEcCCC---CeeEEEEEEeeccCc-cchHHHHHHHHHHHcC-CCCCceeEeeeeee
Q 011508 155 FKATDGFSLENLIGAGSFGSVYKGIFDHDD---HETLVAVKVLNLQHR-GASKSFIAECQALRSI-RHRNLVKIITSCVS 229 (484)
Q Consensus 155 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~---~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~ 229 (484)
....++|.+.+.||+|+||.||+|.....+ ....||+|.+..... ...+.+.+|+.+++++ +||||+++++++.
T Consensus 42 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~- 120 (333)
T 2i1m_A 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACT- 120 (333)
T ss_dssp BCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-
T ss_pred cCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe-
Confidence 344578999999999999999999965432 235799999975543 2346788999999999 8999999999853
Q ss_pred eccCCCceeeEEeecccCCCHHHHHhhcCC----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCC
Q 011508 230 VDFQGNDFEALVYELMVNGSLEEWLHLNRD----------APRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPS 299 (484)
Q Consensus 230 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~----------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~ 299 (484)
..+..++||||+++|+|.+++..... ....+++..++.++.|++.||+||| +++|+||||||+
T Consensus 121 ----~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~ 193 (333)
T 2i1m_A 121 ----HGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA---SKNCIHRDVAAR 193 (333)
T ss_dssp ----SSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGG
T ss_pred ----cCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCcccc
Confidence 44578999999999999999975321 1235899999999999999999999 889999999999
Q ss_pred CeeecCCCceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCC
Q 011508 300 NVLLDGELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTN 378 (484)
Q Consensus 300 NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~ 378 (484)
||+++.++.+||+|||++........ ........++..|+|||.+.+..++.++|||||||++|||+| |..||.
T Consensus 194 NIl~~~~~~~kl~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~ 268 (333)
T 2i1m_A 194 NVLLTNGHVAKIGDFGLARDIMNDSN-----YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYP 268 (333)
T ss_dssp GCEEEGGGEEEBCCCGGGCCGGGCTT-----SEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSST
T ss_pred eEEECCCCeEEECccccccccccccc-----eeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCc
Confidence 99999999999999999986643221 111223457889999999888889999999999999999999 999987
Q ss_pred CCccCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHH
Q 011508 379 EMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEE 458 (484)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~e 458 (484)
...... .......... ... .+..++..+.+++..||+.||.+|||+.|
T Consensus 269 ~~~~~~-~~~~~~~~~~--------~~~-----------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~ 316 (333)
T 2i1m_A 269 GILVNS-KFYKLVKDGY--------QMA-----------------------QPAFAPKNIYSIMQACWALEPTHRPTFQQ 316 (333)
T ss_dssp TCCSSH-HHHHHHHHTC--------CCC-----------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred ccchhH-HHHHHHhcCC--------CCC-----------------------CCCCCCHHHHHHHHHHhccChhhCcCHHH
Confidence 642221 1111111100 000 01122557889999999999999999999
Q ss_pred HHHHHHHHHHHHhhc
Q 011508 459 VAAQLLSFRNKLVKN 473 (484)
Q Consensus 459 vl~~L~~i~~~~~~~ 473 (484)
|++.|+++.....+.
T Consensus 317 l~~~L~~~~~~~~~~ 331 (333)
T 2i1m_A 317 ICSFLQEQAQEDRRE 331 (333)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhcc
Confidence 999999998776543
No 110
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=3e-43 Score=330.03 Aligned_cols=254 Identities=24% Similarity=0.339 Sum_probs=200.9
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCc
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
++|.+.+.||+|+||.||+|++. ++.||+|+++.... ...+.+.+|+.++++++||||+++++++... ...
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~----~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~~~ 82 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ----GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSP---PAP 82 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET----TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTT---TSS
T ss_pred HHhHHHHHhcCCCcceEEEEEEC----CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccC---CCC
Confidence 57899999999999999999964 67799999976542 2345789999999999999999999986432 235
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eeecCCCCCCeeecCCCceEEccc
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETP--IVHCDLKPSNVLLDGELTAHVSDF 314 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~dlk~~NIll~~~~~~kl~Df 314 (484)
..++||||+++|+|.+++.... ...+++..++.++.|++.||+||| +++ |+||||||+||+++.++.++|+||
T Consensus 83 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~l~~~ 157 (271)
T 3kmu_A 83 HPTLITHWMPYGSLYNVLHEGT--NFVVDQSQAVKFALDMARGMAFLH---TLEPLIPRHALNSRSVMIDEDMTARISMA 157 (271)
T ss_dssp SCEEEEECCTTCBHHHHHHSCS--SCCCCHHHHHHHHHHHHHHHHHHT---TSSSCCTTCCCSGGGEEECTTSCEEEEGG
T ss_pred CeEeeecccCCCcHHHHHhhcc--cCCCCHHHHHHHHHHHHHHHHHHh---cCCCceecCCCccceEEEcCCcceeEEec
Confidence 7899999999999999998432 235899999999999999999999 778 999999999999999999999998
Q ss_pred CcccccccccccCCCCccccccccccccccCccccCCCCCCc---ccceehhhHHHHHHHhCCCCCCCCccCCccHhHHH
Q 011508 315 GLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVST---SGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFV 391 (484)
Q Consensus 315 g~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~---~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 391 (484)
|++..... ....+|+.|+|||.+.+..++. ++||||||+++|||++|+.||...... ...
T Consensus 158 ~~~~~~~~------------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-----~~~ 220 (271)
T 3kmu_A 158 DVKFSFQS------------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNM-----EIG 220 (271)
T ss_dssp GSCCTTSC------------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHH-----HHH
T ss_pred cceeeecc------------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChH-----HHH
Confidence 87654311 1235889999999988765544 799999999999999999999753211 111
Q ss_pred HhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHH
Q 011508 392 KEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRN 468 (484)
Q Consensus 392 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~ 468 (484)
.... .....+.+ +..++..+.+++..||+.||++|||++|+++.|+++++
T Consensus 221 ~~~~----~~~~~~~~-----------------------~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 221 MKVA----LEGLRPTI-----------------------PPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp HHHH----HSCCCCCC-----------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred HHHH----hcCCCCCC-----------------------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 1000 00000000 12235678999999999999999999999999998753
No 111
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3.3e-43 Score=329.08 Aligned_cols=257 Identities=28% Similarity=0.428 Sum_probs=205.9
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
.++|++.+.||+|+||.||+|... ++..||+|++..... ..+.+.+|++++++++||||+++++++. .+..
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~---~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~ 77 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWL---NKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCL-----EQAP 77 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEET---TTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEEC-----SSSS
T ss_pred hhheeeeeEecCCCceeEEEEEec---CCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEc-----cCCC
Confidence 357889999999999999999865 456899999976543 3468999999999999999999999853 3457
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
.++||||+++++|.+++.... ..+++..++.++.|++.||+||| +++++||||||+||+++.++.+||+|||++
T Consensus 78 ~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~ 151 (267)
T 3t9t_A 78 ICLVTEFMEHGCLSDYLRTQR---GLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMT 151 (267)
T ss_dssp CEEEECCCTTCBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECGGGCEEECCTTGG
T ss_pred eEEEEeCCCCCcHHHHHhhCc---ccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEECCCCCEEEcccccc
Confidence 899999999999999997542 35889999999999999999999 899999999999999999999999999999
Q ss_pred cccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhhcc
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEALP 396 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 396 (484)
........ .......++..|+|||.+.+..++.++||||||+++|+|++ |+.||..... .......
T Consensus 152 ~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-----~~~~~~i-- 218 (267)
T 3t9t_A 152 RFVLDDQY------TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN-----SEVVEDI-- 218 (267)
T ss_dssp GGBCCHHH------HSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-----HHHHHHH--
T ss_pred cccccccc------cccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCH-----HHHHHHH--
Confidence 86643221 11123457788999999988889999999999999999999 8999875311 1111110
Q ss_pred hhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHH
Q 011508 397 ERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRN 468 (484)
Q Consensus 397 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~ 468 (484)
..-.... .+..++..+.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 219 ---~~~~~~~-----------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 219 ---STGFRLY-----------------------KPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp ---HTTCCCC-----------------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---hcCCcCC-----------------------CCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 0000000 011225578899999999999999999999999999875
No 112
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=2.7e-43 Score=341.88 Aligned_cols=246 Identities=23% Similarity=0.271 Sum_probs=200.2
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
++|++.+.||+|+||.||+|+.. .+++.||+|+++... ....+.+.+|+.+++.++||||+++++++ .++
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~ 113 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHK--ESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF-----KDN 113 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEET--TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEE-----ECS
T ss_pred HHCEEEEEeecCcCcEEEEEEEC--CCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEE-----EcC
Confidence 57899999999999999999954 467899999997542 23446788999999999999999999985 445
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
...++||||+++|+|.+++.... .+++..++.++.||+.||+||| +++|+||||||+||+++.++.+||+|||
T Consensus 114 ~~~~lv~e~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFg 186 (350)
T 1rdq_E 114 SNLYMVMEYVAGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFG 186 (350)
T ss_dssp SEEEEEEECCTTCBHHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCT
T ss_pred CEEEEEEcCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCccceEEECCCCCEEEcccc
Confidence 58899999999999999998543 4899999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhc
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEAL 395 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 395 (484)
+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......
T Consensus 187 ~a~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-----~~~~~~-- 249 (350)
T 1rdq_E 187 FAKRVKGR----------TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP-----IQIYEK-- 249 (350)
T ss_dssp TCEECSSC----------BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHH--
T ss_pred cceeccCC----------cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCH-----HHHHHH--
Confidence 99865321 1235699999999999999999999999999999999999999975311 111111
Q ss_pred chhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCC-----HHHHHHH
Q 011508 396 PERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMN-----MEEVAAQ 462 (484)
Q Consensus 396 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~evl~~ 462 (484)
+....+.. +..++.++.+++.+||+.||++||+ ++||++.
T Consensus 250 ------i~~~~~~~---------------------p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h 294 (350)
T 1rdq_E 250 ------IVSGKVRF---------------------PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp ------HHHCCCCC---------------------CTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred ------HHcCCCCC---------------------CCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence 11000000 1122567899999999999999998 8888753
No 113
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=5e-43 Score=341.97 Aligned_cols=255 Identities=24% Similarity=0.274 Sum_probs=192.1
Q ss_pred hcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCc
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
..++|.+.+.||+|+||.||+|+. ..+++.||+|++..... ..+.+.+|+.+++.++||||+++++++. ...
T Consensus 18 ~~~~y~~~~~lG~G~~g~V~~~~~--~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~-----~~~ 89 (361)
T 3uc3_A 18 DSDRYDFVKDIGSGNFGVARLMRD--KLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVIL-----TPT 89 (361)
T ss_dssp CTTTEEEEEEESSSTTSSEEEEEE--TTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEE-----CSS
T ss_pred CCCcEEEEEEeccCCCEEEEEEEE--CCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEe-----eCC
Confidence 457899999999999999999994 44678999999975432 3467889999999999999999999964 345
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCc--eEEccc
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELT--AHVSDF 314 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~--~kl~Df 314 (484)
..++||||+++|+|.+++.... .+++..++.++.|++.||+||| +++|+||||||+||+++.++. +||+||
T Consensus 90 ~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~ql~~~L~~LH---~~~ivH~Dlkp~Nill~~~~~~~~kl~Df 162 (361)
T 3uc3_A 90 HLAIIMEYASGGELYERICNAG----RFSEDEARFFFQQLLSGVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDF 162 (361)
T ss_dssp EEEEEEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---HTTCCSCCCCGGGEEECSSSSCCEEECCC
T ss_pred EEEEEEEeCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCceEEEeec
Confidence 7899999999999999997533 4899999999999999999999 899999999999999987765 999999
Q ss_pred CcccccccccccCCCCccccccccccccccCccccCCCCCCcc-cceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHh
Q 011508 315 GLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTS-GDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKE 393 (484)
Q Consensus 315 g~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~-~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 393 (484)
|+++..... .......||+.|+|||++.+..++.+ +|||||||++|+|++|+.||....... ........
T Consensus 163 g~a~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-~~~~~~~~ 233 (361)
T 3uc3_A 163 GYSKSSVLH--------SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR-DYRKTIQR 233 (361)
T ss_dssp CCC-----------------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CC-CHHHHHHH
T ss_pred Ccccccccc--------CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHH-HHHHHHHH
Confidence 998743221 11223469999999999888777655 899999999999999999997643221 12221111
Q ss_pred hcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 394 ALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 394 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
+......... ...++.++.+++.+||+.||++|||+.|+++.
T Consensus 234 --------~~~~~~~~~~-------------------~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 234 --------ILSVKYSIPD-------------------DIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp --------HHTTCCCCCT-------------------TSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred --------HhcCCCCCCC-------------------cCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 1111100000 01124578899999999999999999999865
No 114
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=5.5e-43 Score=338.28 Aligned_cols=262 Identities=21% Similarity=0.320 Sum_probs=198.1
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeecc-----
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDF----- 232 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~----- 232 (484)
++|++.+.||+|+||.||+|+.. .+++.||||+++.... ...+.+.+|++++++++||||+++++++.....
T Consensus 6 ~~y~~~~~lG~G~~g~V~~a~~~--~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 83 (332)
T 3qd2_B 6 TDFEPIQCMGRGGFGVVFEAKNK--VDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQE 83 (332)
T ss_dssp HHEEEEEEEECC-CSEEEEEEET--TTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHH
T ss_pred hcCceeeEecCCCCeEEEEEEEc--CCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhh
Confidence 56889999999999999999954 4578899999975443 345679999999999999999999998754321
Q ss_pred -----------------------------------------------CCCceeeEEeecccCCCHHHHHhhcCCCCCCCC
Q 011508 233 -----------------------------------------------QGNDFEALVYELMVNGSLEEWLHLNRDAPRNLN 265 (484)
Q Consensus 233 -----------------------------------------------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~ 265 (484)
..+.+.++||||+++++|.+++..... ....+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~ 162 (332)
T 3qd2_B 84 EMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCS-LEDRE 162 (332)
T ss_dssp HHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCS-GGGSC
T ss_pred hhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccC-ccchh
Confidence 112347999999999999999985442 33467
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcccccccccccCCC-----Ccccccccccc
Q 011508 266 LLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFLPEAANNLSS-----NQSSSVGVKGT 340 (484)
Q Consensus 266 ~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~-----~~~~~~~~~g~ 340 (484)
+..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++........... .........||
T Consensus 163 ~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt 239 (332)
T 3qd2_B 163 HGVCLHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGT 239 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-C
T ss_pred hHHHHHHHHHHHHHHHHHH---hCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCC
Confidence 7789999999999999999 899999999999999999999999999999877543211110 01122345699
Q ss_pred ccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchhhhhhcCcccccccccccchhhh
Q 011508 341 VGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEAN 420 (484)
Q Consensus 341 ~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~ 420 (484)
+.|+|||++.+..++.++|||||||++|||++|..|+... ..... .........
T Consensus 240 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~-------~~~~~--------~~~~~~~~~----------- 293 (332)
T 3qd2_B 240 KLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER-------VRIIT--------DVRNLKFPL----------- 293 (332)
T ss_dssp GGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH-------HHHHH--------HHHTTCCCH-----------
T ss_pred cCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH-------HHHHH--------HhhccCCCc-----------
Confidence 9999999999999999999999999999999987764221 00000 000000000
Q ss_pred hhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 421 AHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 421 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
....+...+.+++.+||+.||++|||++|+++
T Consensus 294 ---------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 294 ---------LFTQKYPQEHMMVQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp ---------HHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred ---------ccccCChhHHHHHHHHccCCCCcCCCHHHHhh
Confidence 01233556789999999999999999999986
No 115
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.6e-43 Score=339.52 Aligned_cols=263 Identities=23% Similarity=0.392 Sum_probs=200.4
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCC--eeEEEEEEeeccC-ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCC
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDH--ETLVAVKVLNLQH-RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQG 234 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~--~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 234 (484)
.++|++.+.||+|+||.||+|++...+. ..+||+|.+.... ....+.+.+|+.++++++||||+++++++..
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~----- 88 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT----- 88 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEES-----
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEec-----
Confidence 4679999999999999999999654322 2346888775433 3445789999999999999999999998642
Q ss_pred CceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEccc
Q 011508 235 NDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDF 314 (484)
Q Consensus 235 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 314 (484)
...++|+||+.+|+|.+++.... ..+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+||
T Consensus 89 -~~~~~v~~~~~~g~L~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kL~Df 161 (327)
T 3lzb_A 89 -STVQLITQLMPFGCLLDYVREHK---DNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDF 161 (327)
T ss_dssp -SSEEEEECCCSSCBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCT
T ss_pred -CCceEEEEecCCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHh---hCCCcCCCCCHHHEEEcCCCCEEEccC
Confidence 13689999999999999997543 35899999999999999999999 899999999999999999999999999
Q ss_pred CcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHh
Q 011508 315 GLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKE 393 (484)
Q Consensus 315 g~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~ 393 (484)
|+++....... ........+|..|+|||.+.+..++.++|||||||++|||++ |+.||....... +...+..
T Consensus 162 G~a~~~~~~~~-----~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~--~~~~~~~ 234 (327)
T 3lzb_A 162 GLAKLLGAEEK-----EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--ISSILEK 234 (327)
T ss_dssp TC---------------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHHHHHT
T ss_pred cceeEccCccc-----cccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH--HHHHHHc
Confidence 99987643321 111223456889999999999999999999999999999999 999997642221 1111110
Q ss_pred hcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHHHH
Q 011508 394 ALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRNKL 470 (484)
Q Consensus 394 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~ 470 (484)
. ... ..+..++.++.+++..||+.||++|||+.|+++.|+.+....
T Consensus 235 ~------------~~~-------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 280 (327)
T 3lzb_A 235 G------------ERL-------------------PQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDP 280 (327)
T ss_dssp T------------CCC-------------------CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTSH
T ss_pred C------------CCC-------------------CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhCc
Confidence 0 000 001223567899999999999999999999999999987543
No 116
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=1.4e-43 Score=342.70 Aligned_cols=250 Identities=24% Similarity=0.359 Sum_probs=199.3
Q ss_pred HhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcC-CCCCceeEeeeeeeec
Q 011508 156 KATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSI-RHRNLVKIITSCVSVD 231 (484)
Q Consensus 156 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~ 231 (484)
...++|.+.+.||+|+||.||+|+.. .+++.||+|+++... ....+.+..|..++..+ +||||+++++++
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~---- 87 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFK--KTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTF---- 87 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEET--TTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEE----
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEEC--CCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEE----
Confidence 34578999999999999999999954 467899999997542 23446778899999877 999999999985
Q ss_pred cCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEE
Q 011508 232 FQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHV 311 (484)
Q Consensus 232 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl 311 (484)
......++||||+++|+|.+++.... .+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||
T Consensus 88 -~~~~~~~lv~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL 159 (345)
T 1xjd_A 88 -QTKENLFFVMEYLNGGDLMYHIQSCH----KFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKI 159 (345)
T ss_dssp -ECSSEEEEEEECCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEE
T ss_pred -EeCCEEEEEEeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCChhhEEECCCCCEEE
Confidence 44558999999999999999997543 4899999999999999999999 899999999999999999999999
Q ss_pred cccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHH
Q 011508 312 SDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFV 391 (484)
Q Consensus 312 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 391 (484)
+|||+++..... .......+||+.|+|||++.+..++.++|||||||++|||++|+.||..... ....
T Consensus 160 ~DFG~a~~~~~~-------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-----~~~~ 227 (345)
T 1xjd_A 160 ADFGMCKENMLG-------DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE-----EELF 227 (345)
T ss_dssp CCCTTCBCCCCT-------TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHH
T ss_pred eEChhhhhcccC-------CCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCH-----HHHH
Confidence 999999754221 1122345799999999999999999999999999999999999999975321 1111
Q ss_pred HhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHH-HHH
Q 011508 392 KEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNME-EVA 460 (484)
Q Consensus 392 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~-evl 460 (484)
...... ...+ +..+..++.+++.+||+.||++||++. |++
T Consensus 228 ~~i~~~------~~~~-----------------------p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 228 HSIRMD------NPFY-----------------------PRWLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp HHHHHC------CCCC-----------------------CTTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred HHHHhC------CCCC-----------------------CcccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 110000 0000 111255788999999999999999997 664
No 117
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=3.3e-43 Score=344.46 Aligned_cols=247 Identities=21% Similarity=0.231 Sum_probs=192.2
Q ss_pred cCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCceeeEEee
Q 011508 164 ENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFEALVYE 243 (484)
Q Consensus 164 ~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 243 (484)
.+.||+|+||.||+|+.. .++..||+|+++.......+.+.+|++++++++||||+++++++. .....++|||
T Consensus 94 ~~~lG~G~~g~Vy~a~~~--~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~-----~~~~~~lv~E 166 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEET--ATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFE-----SKNDIVLVME 166 (373)
T ss_dssp EEECC-----CEEEEEET--TTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEE-----CSSEEEEEEE
T ss_pred ceEEecCcCEEEEEEEEc--CCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEE-----ECCEEEEEEe
Confidence 568999999999999844 457889999998765555678999999999999999999999864 3457899999
Q ss_pred cccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeee--cCCCceEEcccCcccccc
Q 011508 244 LMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLL--DGELTAHVSDFGLAKFLP 321 (484)
Q Consensus 244 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll--~~~~~~kl~Dfg~a~~~~ 321 (484)
|+++++|.+++... ...+++..++.++.||+.||+||| +.+|+||||||+|||+ +.++.+||+|||+++...
T Consensus 167 ~~~~~~L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~ 240 (373)
T 2x4f_A 167 YVDGGELFDRIIDE---SYNLTELDTILFMKQICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYK 240 (373)
T ss_dssp CCTTCEEHHHHHHT---GGGCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECC
T ss_pred CCCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEecCCCCcEEEEeCCCceecC
Confidence 99999999988643 235899999999999999999999 8999999999999999 567799999999998764
Q ss_pred cccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchhhhh
Q 011508 322 EAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPERLAE 401 (484)
Q Consensus 322 ~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (484)
... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .... .
T Consensus 241 ~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~-----~~~~--------~ 299 (373)
T 2x4f_A 241 PRE--------KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA-----ETLN--------N 299 (373)
T ss_dssp TTC--------BCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHH-----HHHH--------H
T ss_pred Ccc--------ccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHH--------H
Confidence 322 112346899999999999999999999999999999999999999753211 1111 1
Q ss_pred hcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 402 IVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 402 ~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
+.......... ....++.++.+++.+||+.||++|||+.|+++
T Consensus 300 i~~~~~~~~~~-----------------~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 300 ILACRWDLEDE-----------------EFQDISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp HHHTCCCSCSG-----------------GGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HHhccCCCChh-----------------hhccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 11000000000 01123567899999999999999999999997
No 118
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=4.3e-43 Score=340.42 Aligned_cols=250 Identities=24% Similarity=0.282 Sum_probs=199.6
Q ss_pred hcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcC-CCCCceeEeeeeeeecc
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSI-RHRNLVKIITSCVSVDF 232 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 232 (484)
..++|++.+.||+|+||.||+|+. ..+++.||+|+++... ....+.+..|..++..+ +||||+++++++
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~--~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~----- 90 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSER--KGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCF----- 90 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEE--TTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEE-----
T ss_pred chHHcEEEEEEeeCCCEEEEEEEE--CCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEE-----
Confidence 346899999999999999999994 4468899999997542 23456788999999988 899999999984
Q ss_pred CCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEc
Q 011508 233 QGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVS 312 (484)
Q Consensus 233 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~ 312 (484)
...+..++||||+++|+|.+++.... .+++..++.++.||+.||+||| +++|+||||||+||+++.++.+||+
T Consensus 91 ~~~~~~~lv~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~ 163 (353)
T 2i0e_A 91 QTMDRLYFVMEYVNGGDLMYHIQQVG----RFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIA 163 (353)
T ss_dssp ECSSEEEEEEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEEC
T ss_pred EcCCEEEEEEeCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEEcCCCcEEEE
Confidence 44558999999999999999997543 4899999999999999999999 8999999999999999999999999
Q ss_pred ccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHH
Q 011508 313 DFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVK 392 (484)
Q Consensus 313 Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 392 (484)
|||+++..... .......+||+.|+|||++.+..++.++|||||||++|||++|+.||..... .....
T Consensus 164 DFG~a~~~~~~-------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~-----~~~~~ 231 (353)
T 2i0e_A 164 DFGMCKENIWD-------GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-----DELFQ 231 (353)
T ss_dssp CCTTCBCCCCT-------TCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHH
T ss_pred eCCcccccccC-------CcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCH-----HHHHH
Confidence 99999854221 1122345799999999999999999999999999999999999999975321 11111
Q ss_pred hhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCC-----HHHHHH
Q 011508 393 EALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMN-----MEEVAA 461 (484)
Q Consensus 393 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt-----~~evl~ 461 (484)
. +....+.. +...+.++.+++.+||+.||++||+ ++|+++
T Consensus 232 ~--------i~~~~~~~---------------------p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 232 S--------IMEHNVAY---------------------PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp H--------HHHCCCCC---------------------CTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred H--------HHhCCCCC---------------------CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 1 11110000 1122557889999999999999996 466654
No 119
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=5.6e-44 Score=338.41 Aligned_cols=256 Identities=24% Similarity=0.373 Sum_probs=200.2
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCC-----eeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeecc
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDH-----ETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDF 232 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~-----~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 232 (484)
.++|.+.+.||+|+||.||+|+....+. +..||+|++........+.+.+|+.++++++||||+++++++.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~---- 82 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCV---- 82 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEEC----
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEE----
Confidence 3578899999999999999998654322 2579999998766666688999999999999999999999964
Q ss_pred CCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCc----
Q 011508 233 QGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELT---- 308 (484)
Q Consensus 233 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~---- 308 (484)
.++..++||||+++|+|.+++.... ..+++..++.++.|++.||+||| +++|+||||||+||+++.++.
T Consensus 83 -~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~ 155 (289)
T 4fvq_A 83 -CGDENILVQEFVKFGSLDTYLKKNK---NCINILWKLEVAKQLAAAMHFLE---ENTLIHGNVCAKNILLIREEDRKTG 155 (289)
T ss_dssp -CTTCCEEEEECCTTCBHHHHHHHTG---GGCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEEECCBGGGT
T ss_pred -eCCCCEEEEECCCCCCHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHh---hCCeECCCcCcceEEEecCCccccc
Confidence 3457799999999999999997532 34899999999999999999999 899999999999999998886
Q ss_pred ----eEEcccCcccccccccccCCCCccccccccccccccCccccCC-CCCCcccceehhhHHHHHHHhCCCCCCCCccC
Q 011508 309 ----AHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTG 383 (484)
Q Consensus 309 ----~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~ 383 (484)
+||+|||.+...... ....++..|+|||++.+ ..++.++||||||+++|||++|..|+......
T Consensus 156 ~~~~~kl~Dfg~~~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~ 224 (289)
T 4fvq_A 156 NPPFIKLSDPGISITVLPK-----------DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDS 224 (289)
T ss_dssp BCCEEEECCCCSCTTTSCH-----------HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH
T ss_pred ccceeeeccCcccccccCc-----------cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccch
Confidence 999999998754221 12347889999999887 67899999999999999999965554322111
Q ss_pred CccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHH
Q 011508 384 NLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQL 463 (484)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 463 (484)
.. ....... ...+ +..++.++.+++..||+.||++|||+.|+++.|
T Consensus 225 ~~-~~~~~~~----------~~~~-----------------------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l 270 (289)
T 4fvq_A 225 QR-KLQFYED----------RHQL-----------------------PAPKAAELANLINNCMDYEPDHRPSFRAIIRDL 270 (289)
T ss_dssp HH-HHHHHHT----------TCCC-----------------------CCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHH
T ss_pred HH-HHHHhhc----------cCCC-----------------------CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence 00 0000000 0000 001133578899999999999999999999999
Q ss_pred HHHHHH
Q 011508 464 LSFRNK 469 (484)
Q Consensus 464 ~~i~~~ 469 (484)
+++...
T Consensus 271 ~~l~~p 276 (289)
T 4fvq_A 271 NSLFTP 276 (289)
T ss_dssp HTCC--
T ss_pred HHhcCC
Confidence 887543
No 120
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.3e-43 Score=339.86 Aligned_cols=266 Identities=26% Similarity=0.428 Sum_probs=201.9
Q ss_pred cCCCCccCccccccceeEEEEEEcCCC--CeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCC
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDD--HETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQG 234 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~--~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 234 (484)
..+|.+.+.||+|+||.||+|+..... .+..||+|+++.... .....+.+|+.++++++||||+++++++ ..
T Consensus 43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~ 117 (333)
T 1mqb_A 43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVI-----SK 117 (333)
T ss_dssp TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-----CS
T ss_pred hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEE-----ec
Confidence 356778899999999999999875432 246799999975433 2335788999999999999999999985 34
Q ss_pred CceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEccc
Q 011508 235 NDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDF 314 (484)
Q Consensus 235 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 314 (484)
....++||||+++++|.+++... ...+++.+++.++.|++.||+||| +++|+||||||+||+++.++.+||+||
T Consensus 118 ~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Df 191 (333)
T 1mqb_A 118 YKPMMIITEYMENGALDKFLREK---DGEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDF 191 (333)
T ss_dssp SSSEEEEEECCTTEEHHHHHHHT---TTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC
T ss_pred CCCcEEEEeCCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChheEEECCCCcEEECCC
Confidence 55789999999999999999753 245899999999999999999999 889999999999999999999999999
Q ss_pred CcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHh
Q 011508 315 GLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKE 393 (484)
Q Consensus 315 g~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~ 393 (484)
|++......... ........++..|+|||.+.+..++.++|||||||++|||++ |+.||...... .....
T Consensus 192 g~~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~-----~~~~~ 262 (333)
T 1mqb_A 192 GLSRVLEDDPEA----TYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH-----EVMKA 262 (333)
T ss_dssp CC---------------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHHHH
T ss_pred Ccchhhcccccc----ccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH-----HHHHH
Confidence 999876432211 111122346788999999988899999999999999999999 99999653211 11110
Q ss_pred hcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHHHHh
Q 011508 394 ALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRNKLV 471 (484)
Q Consensus 394 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~~ 471 (484)
+.+..... .+..++..+.+++.+||+.||++||++.|+++.|+.+.....
T Consensus 263 --------~~~~~~~~--------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~ 312 (333)
T 1mqb_A 263 --------INDGFRLP--------------------TPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPD 312 (333)
T ss_dssp --------HHTTCCCC--------------------CCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGG
T ss_pred --------HHCCCcCC--------------------CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcch
Confidence 00000000 012235678999999999999999999999999999876543
No 121
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=9.1e-43 Score=351.61 Aligned_cols=206 Identities=26% Similarity=0.397 Sum_probs=159.1
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
.++|++.+.||+|+||.||+|+. ..+++.||||++..... ...+.+.+|+.+|++++||||+++++++...+....
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~--~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 129 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYD--KLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKF 129 (458)
T ss_dssp CTTEEECCC-------CEEEEEE--CC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTC
T ss_pred CCCeEEeeEeeecCCeEEEEEEE--CCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccC
Confidence 47899999999999999999984 44678999999865332 234678899999999999999999999866555566
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
...++||||+ +++|.+++.. ...+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||
T Consensus 130 ~~~~lv~e~~-~~~L~~~~~~----~~~l~~~~~~~~~~qi~~aL~~LH---~~~iiHrDlKp~NILl~~~~~~kl~DFG 201 (458)
T 3rp9_A 130 DELYVVLEIA-DSDFKKLFRT----PVYLTELHIKTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFG 201 (458)
T ss_dssp CCEEEEECCC-SEEHHHHHHS----SCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCT
T ss_pred ceEEEEEecc-ccchhhhccc----CCCCCHHHHHHHHHHHHHHHHHHH---hCCcCCCCCChhhEEECCCCCEeecccc
Confidence 7889999998 6799999873 245999999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccCCC--------------------CccccccccccccccCcccc-CCCCCCcccceehhhHHHHHHHhC
Q 011508 316 LAKFLPEAANNLSS--------------------NQSSSVGVKGTVGYAAPEYG-MGSEVSTSGDVYSFGILLLEMFTG 373 (484)
Q Consensus 316 ~a~~~~~~~~~~~~--------------------~~~~~~~~~g~~~y~aPE~~-~~~~~~~~~Dvws~Gvvl~elltg 373 (484)
+++........... ........+||+.|+|||++ ....++.++|||||||++|||++|
T Consensus 202 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 202 LARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp TCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred cchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 99876432211000 00122345789999999975 566799999999999999999994
No 122
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=3.6e-43 Score=349.62 Aligned_cols=266 Identities=19% Similarity=0.232 Sum_probs=205.7
Q ss_pred ccHHhHHHhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcCCCCCceeEee
Q 011508 149 VSYQNLFKATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSIRHRNLVKIIT 225 (484)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~ 225 (484)
..+.++....++|++.+.||+|+||+||+|+.. .+++.||+|+++... ......+.+|..++..++||||+++++
T Consensus 64 ~~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~--~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~ 141 (437)
T 4aw2_A 64 SKVKQMRLHREDFEILKVIGRGAFGEVAVVKLK--NADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHY 141 (437)
T ss_dssp HHHHHHSCCGGGEEEEEEEEECSSEEEEEEEET--TTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEE
T ss_pred chhhcccCChhheEEEEEEEeCCCEEEEEEEEc--CCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence 345555667789999999999999999999954 457899999997532 222345889999999999999999999
Q ss_pred eeeeeccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecC
Q 011508 226 SCVSVDFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDG 305 (484)
Q Consensus 226 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~ 305 (484)
+|. ++...++||||+++|+|.+++... ...+++..+..++.|++.||+||| +++|+||||||+|||++.
T Consensus 142 ~~~-----~~~~~~lV~Ey~~gg~L~~~l~~~---~~~l~e~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILl~~ 210 (437)
T 4aw2_A 142 AFQ-----DDNNLYLVMDYYVGGDLLTLLSKF---EDRLPEEMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDM 210 (437)
T ss_dssp EEE-----CSSEEEEEECCCTTCBHHHHHHTT---TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECT
T ss_pred EEe-----eCCEEEEEEecCCCCcHHHHHHHc---cCCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeeEcC
Confidence 853 455899999999999999999742 245899999999999999999999 899999999999999999
Q ss_pred CCceEEcccCcccccccccccCCCCccccccccccccccCccccC-----CCCCCcccceehhhHHHHHHHhCCCCCCCC
Q 011508 306 ELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGM-----GSEVSTSGDVYSFGILLLEMFTGKGPTNEM 380 (484)
Q Consensus 306 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dvws~Gvvl~elltg~~p~~~~ 380 (484)
++.+||+|||+++...... .......+||+.|+|||++. ...++.++|||||||++|||++|+.||...
T Consensus 211 ~g~vkL~DFGla~~~~~~~------~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~ 284 (437)
T 4aw2_A 211 NGHIRLADFGSCLKLMEDG------TVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAE 284 (437)
T ss_dssp TSCEEECCCTTCEECCTTS------CEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred CCCEEEcchhhhhhcccCC------CcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCC
Confidence 9999999999997654322 11223357999999999986 567899999999999999999999999753
Q ss_pred ccCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCC--CCCHHH
Q 011508 381 FTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRE--RMNMEE 458 (484)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPt~~e 458 (484)
.. .+......... ....-+.. ...++.++.+|+.+||..+|++ ||+++|
T Consensus 285 ~~-----~~~~~~i~~~~-~~~~~p~~-----------------------~~~~s~~~~dLi~~lL~~~~~r~~r~~~~e 335 (437)
T 4aw2_A 285 SL-----VETYGKIMNHK-ERFQFPTQ-----------------------VTDVSENAKDLIRRLICSREHRLGQNGIED 335 (437)
T ss_dssp SH-----HHHHHHHHTHH-HHCCCCSS-----------------------CCCSCHHHHHHHHTTSSCGGGCTTTTTTHH
T ss_pred Ch-----hHHHHhhhhcc-ccccCCcc-----------------------cccCCHHHHHHHHHHhcccccccCCCCHHH
Confidence 21 11111111000 00000000 0112556889999999988888 999999
Q ss_pred HHHH
Q 011508 459 VAAQ 462 (484)
Q Consensus 459 vl~~ 462 (484)
+++.
T Consensus 336 il~H 339 (437)
T 4aw2_A 336 FKKH 339 (437)
T ss_dssp HHTS
T ss_pred HhCC
Confidence 9763
No 123
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=5.8e-43 Score=351.58 Aligned_cols=249 Identities=26% Similarity=0.383 Sum_probs=200.5
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCC
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQG 234 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 234 (484)
.++|.+.+.||+|+||.||+|+. ..+++.||||++.... ......+.+|+.+++.++||||+++++++. .
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~--~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~-----~ 87 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKH--ELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVIS-----T 87 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEE--TTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEE-----C
T ss_pred ecCEEEEEEEeeCCCeEEEEEEE--CCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE-----E
Confidence 36799999999999999999984 4467899999997542 223467889999999999999999999854 3
Q ss_pred CceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEccc
Q 011508 235 NDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDF 314 (484)
Q Consensus 235 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 314 (484)
....++||||+++|+|.+++.. ...+++..++.++.||+.||+||| +++|+||||||+||+++.++.+||+||
T Consensus 88 ~~~~~lv~E~~~gg~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDLkp~NIll~~~~~vkL~DF 160 (476)
T 2y94_A 88 PSDIFMVMEYVSGGELFDYICK----NGRLDEKESRRLFQQILSGVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADF 160 (476)
T ss_dssp SSEEEEEEECCSSEEHHHHTTS----SSSCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEECTTCCEEECCC
T ss_pred CCEEEEEEeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcccccHHHEEEecCCCeEEEec
Confidence 4588999999999999999973 245899999999999999999999 999999999999999999999999999
Q ss_pred CcccccccccccCCCCccccccccccccccCccccCCCCC-CcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHh
Q 011508 315 GLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEV-STSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKE 393 (484)
Q Consensus 315 g~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 393 (484)
|++....... ......||+.|+|||++.+..+ +.++||||+||++|||++|+.||..... .....
T Consensus 161 G~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~-----~~~~~- 226 (476)
T 2y94_A 161 GLSNMMSDGE--------FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV-----PTLFK- 226 (476)
T ss_dssp SSCEECCTTC--------CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSS-----HHHHH-
T ss_pred cchhhccccc--------cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCH-----HHHHH-
Confidence 9998763321 1223469999999999988765 7899999999999999999999975321 11111
Q ss_pred hcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 394 ALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 394 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
.+.+..... +..+..++.+++.+||+.||++|||++|+++.
T Consensus 227 -------~i~~~~~~~---------------------p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 227 -------KICDGIFYT---------------------PQYLNPSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp -------HHHTTCCCC---------------------CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred -------HHhcCCcCC---------------------CccCCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 111111000 11124568899999999999999999999873
No 124
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=2.3e-43 Score=332.44 Aligned_cols=265 Identities=26% Similarity=0.443 Sum_probs=207.4
Q ss_pred HhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 156 KATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 156 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
...++|++.+.||+|+||.||+|... ++..||+|++.... ...+.+.+|++++++++||||+++++++. .
T Consensus 10 v~~~~y~~~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~------~ 79 (279)
T 1qpc_A 10 VPRETLKLVERLGAGQFGEVWMGYYN---GHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT------Q 79 (279)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEET---TTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC------S
T ss_pred cCHHhhhheeeecCCCCeEEEEEEEc---CCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEc------C
Confidence 34467899999999999999999865 45679999987543 34578999999999999999999999852 2
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
+..++||||+++++|.+++.... ...+++..++.++.|++.||+||| +++|+||||||+||++++++.+||+|||
T Consensus 80 ~~~~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg 154 (279)
T 1qpc_A 80 EPIYIITEYMENGSLVDFLKTPS--GIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFG 154 (279)
T ss_dssp SSCEEEEECCTTCBHHHHTTSHH--HHTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCT
T ss_pred CCcEEEEecCCCCCHHHHHhcCC--CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHhhEEEcCCCCEEECCCc
Confidence 35789999999999999997432 125899999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhh
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEA 394 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~ 394 (484)
.+........ .......++..|+|||.+.+..++.++||||||+++|||++ |+.||...... +.....
T Consensus 155 ~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-----~~~~~~ 223 (279)
T 1qpc_A 155 LARLIEDNEY------TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP-----EVIQNL 223 (279)
T ss_dssp TCEECSSSCE------ECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-----HHHHHH
T ss_pred ccccccCccc------ccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH-----HHHHHH
Confidence 9987643221 11123346788999999988889999999999999999999 99998653211 111100
Q ss_pred cchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHHHHhhcc
Q 011508 395 LPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRNKLVKNV 474 (484)
Q Consensus 395 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~~~~~ 474 (484)
..-.... .+..++.++.+++..||+.||++|||+.++++.|+++........
T Consensus 224 -----~~~~~~~-----------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~~ 275 (279)
T 1qpc_A 224 -----ERGYRMV-----------------------RPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATEGQY 275 (279)
T ss_dssp -----HTTCCCC-----------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC----
T ss_pred -----hcccCCC-----------------------CcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhccCCC
Confidence 0000000 012235678999999999999999999999999999987654433
No 125
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=8.4e-43 Score=337.33 Aligned_cols=268 Identities=23% Similarity=0.361 Sum_probs=208.8
Q ss_pred cCCCCccCccccccceeEEEEEEcC-----CCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcC-CCCCceeEeeeeeee
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDH-----DDHETLVAVKVLNLQHR-GASKSFIAECQALRSI-RHRNLVKIITSCVSV 230 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~ 230 (484)
.++|++.+.||+|+||.||+|+... ..++..||+|+++.... ...+.+.+|+++++++ +||||+++++++.
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~-- 111 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT-- 111 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC--
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEc--
Confidence 4678999999999999999998642 13467899999975533 2346788999999999 9999999999853
Q ss_pred ccCCCceeeEEeecccCCCHHHHHhhcCCC------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCC
Q 011508 231 DFQGNDFEALVYELMVNGSLEEWLHLNRDA------------PRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKP 298 (484)
Q Consensus 231 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~ 298 (484)
.++..++||||+++|+|.+++...... ...+++..++.++.|++.||+||| +++|+||||||
T Consensus 112 ---~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp 185 (334)
T 2pvf_A 112 ---QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAA 185 (334)
T ss_dssp ---SSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSG
T ss_pred ---cCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCcc
Confidence 445789999999999999999854321 234899999999999999999999 89999999999
Q ss_pred CCeeecCCCceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCC
Q 011508 299 SNVLLDGELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPT 377 (484)
Q Consensus 299 ~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~ 377 (484)
+||+++.++.+||+|||++........ ........+++.|+|||++.+..++.++||||||+++|||++ |+.||
T Consensus 186 ~NIll~~~~~~kL~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~ 260 (334)
T 2pvf_A 186 RNVLVTENNVMKIADFGLARDINNIDY-----YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260 (334)
T ss_dssp GGEEECTTCCEEECCCTTCEECTTTSS-----EECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred ceEEEcCCCCEEEcccccccccccccc-----ccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCc
Confidence 999999999999999999986643221 111223457889999999988889999999999999999999 99999
Q ss_pred CCCccCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHH
Q 011508 378 NEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNME 457 (484)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ 457 (484)
..... .+..... ..-.... .+..++..+.+++..||+.||.+|||+.
T Consensus 261 ~~~~~-----~~~~~~~-----~~~~~~~-----------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~ 307 (334)
T 2pvf_A 261 PGIPV-----EELFKLL-----KEGHRMD-----------------------KPANCTNELYMMMRDCWHAVPSQRPTFK 307 (334)
T ss_dssp TTCCH-----HHHHHHH-----HHTCCCC-----------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred CcCCH-----HHHHHHH-----hcCCCCC-----------------------CCccCCHHHHHHHHHHccCChhhCcCHH
Confidence 65321 1111100 0000000 0122356789999999999999999999
Q ss_pred HHHHHHHHHHHHHh
Q 011508 458 EVAAQLLSFRNKLV 471 (484)
Q Consensus 458 evl~~L~~i~~~~~ 471 (484)
|+++.|+.+.....
T Consensus 308 ell~~L~~l~~~~~ 321 (334)
T 2pvf_A 308 QLVEDLDRILTLTT 321 (334)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhccc
Confidence 99999999976553
No 126
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=6.2e-44 Score=358.80 Aligned_cols=260 Identities=29% Similarity=0.464 Sum_probs=202.4
Q ss_pred HhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 156 KATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 156 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
...++|++.+.||+|+||.||+|.+.. +..||||+++... ...+.+.+|++++++++||||+++++++..
T Consensus 181 i~~~~~~~~~~lG~G~fg~Vy~~~~~~---~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~------ 250 (452)
T 1fmk_A 181 IPRESLRLEVKLGQGCFGEVWMGTWNG---TTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE------ 250 (452)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETT---TEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS------
T ss_pred cChhHceeeeeecCCCCeEEEEEEECC---CceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC------
Confidence 345678899999999999999999753 4669999997644 345789999999999999999999998632
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
...++||||+++|+|.+++.... ...+++.+++.++.|++.||+||| +++|+||||||+|||++.++.+||+|||
T Consensus 251 ~~~~iv~e~~~~gsL~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG 325 (452)
T 1fmk_A 251 EPIYIVTEYMSKGSLLDFLKGET--GKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFG 325 (452)
T ss_dssp SSCEEEECCCTTCBHHHHHSHHH--HTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCC
T ss_pred CceEEEehhhcCCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEECCCCCEEECCCc
Confidence 35799999999999999997432 234889999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhh
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEA 394 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~ 394 (484)
+++...... ........++..|+|||.+....++.++|||||||++|||+| |+.||...... +.....
T Consensus 326 ~a~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~-----~~~~~i 394 (452)
T 1fmk_A 326 LARLIEDNE------YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-----EVLDQV 394 (452)
T ss_dssp TTC--------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-----HHHHHH
T ss_pred cceecCCCc------eecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH-----HHHHHH
Confidence 998764321 111223346789999999988899999999999999999999 99999753211 111100
Q ss_pred cchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHHH
Q 011508 395 LPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRNK 469 (484)
Q Consensus 395 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~ 469 (484)
..-.. + ..+..|+..+.+++.+||+.||++|||+++|++.|+.+...
T Consensus 395 -----~~~~~--~---------------------~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~ 441 (452)
T 1fmk_A 395 -----ERGYR--M---------------------PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 441 (452)
T ss_dssp -----HTTCC--C---------------------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred -----HcCCC--C---------------------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhcc
Confidence 00000 0 00233467789999999999999999999999999887543
No 127
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.4e-43 Score=347.74 Aligned_cols=287 Identities=19% Similarity=0.246 Sum_probs=211.4
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCc
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
.++|.+.+.||+|+||.||+|+.. .+++.||||+++.... ...+.+.+|++++++++||||+++++++.. ....
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~---~~~~ 82 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHK--KTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEE---TTTR 82 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEET--TTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEEC---TTTC
T ss_pred CCceEEEEEEEcCCCeEEEEEEEC--CCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeecc---CCCC
Confidence 357899999999999999999954 4578999999975432 334678899999999999999999998642 2344
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeee----cCCCceEEc
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLL----DGELTAHVS 312 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll----~~~~~~kl~ 312 (484)
..++||||+++|+|.+++..... ...+++..++.++.|++.||+||| +++|+||||||+||++ +.++.+||+
T Consensus 83 ~~~lv~e~~~~g~L~~~l~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~ 158 (396)
T 4eut_A 83 HKVLIMEFCPCGSLYTVLEEPSN-AYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLT 158 (396)
T ss_dssp CEEEEECCCTTEEHHHHTTSGGG-TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEECTTSCEEEEEC
T ss_pred eeEEEEecCCCCCHHHHHHhhhc-ccCCCHHHHHHHHHHHHHHHHHHH---HCCEEECCcCHHHEEEeecCCCceeEEEe
Confidence 67999999999999999975432 233899999999999999999999 8999999999999999 777889999
Q ss_pred ccCcccccccccccCCCCccccccccccccccCccccCC--------CCCCcccceehhhHHHHHHHhCCCCCCCCccCC
Q 011508 313 DFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG--------SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGN 384 (484)
Q Consensus 313 Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~--------~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~ 384 (484)
|||+++...... ......||..|+|||++.+ ..++.++|||||||++|||++|+.||.......
T Consensus 159 DFG~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~ 230 (396)
T 4eut_A 159 DFGAARELEDDE--------QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPR 230 (396)
T ss_dssp CGGGCEECCCGG--------GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTT
T ss_pred cCCCceEccCCC--------ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCccc
Confidence 999998764322 1223468999999998754 467889999999999999999999997543322
Q ss_pred ccHh---HHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 385 LTLH---NFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 385 ~~~~---~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
.... .......+..+..+.... ..... .... ..........+...+.+++..||+.||++|||+.|+++
T Consensus 231 ~~~~~~~~~~~~~p~~~~~~~~~~~-~~~~~--~~~~-----~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~ 302 (396)
T 4eut_A 231 RNKEVMYKIITGKPSGAISGVQKAE-NGPID--WSGD-----MPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFA 302 (396)
T ss_dssp TCHHHHHHHHHSCCTTCCEEEECST-TCCEE--EESS-----CCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHH
T ss_pred chHHHHHHHhcCCCcccchhheecc-CCCcc--cCcc-----CCcccccchHHHhhchHHHHHhhccChhhhccHHHHHH
Confidence 2111 111111111111110000 00000 0000 00011113556788999999999999999999999999
Q ss_pred HHHHHHHH
Q 011508 462 QLLSFRNK 469 (484)
Q Consensus 462 ~L~~i~~~ 469 (484)
.++++..+
T Consensus 303 ~l~~il~~ 310 (396)
T 4eut_A 303 ETSDILHR 310 (396)
T ss_dssp HHHHHHTC
T ss_pred HHHHHhhc
Confidence 99887643
No 128
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=3.5e-43 Score=338.64 Aligned_cols=262 Identities=23% Similarity=0.349 Sum_probs=202.2
Q ss_pred CCCCccCccccccceeEEEEEEcCCCC--eeEEEEEEeeccC-ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDH--ETLVAVKVLNLQH-RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~--~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
++|++.+.||+|+||.||+|++...+. ...||+|.+.... ......+.+|+.++++++||||+++++++. +
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------~ 86 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP------G 86 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC------B
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc------C
Confidence 578899999999999999999654322 2348888875433 233356788999999999999999999862 2
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
...++||||+++|+|.+++... ...+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||
T Consensus 87 ~~~~~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg 160 (325)
T 3kex_A 87 SSLQLVTQYLPLGSLLDHVRQH---RGALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFG 160 (325)
T ss_dssp SSEEEEEECCTTCBSHHHHHSS---GGGSCTTHHHHHHHHHHHHHHHHH---HTTCCCSCCSSTTEEESSSSCEEECSCS
T ss_pred CccEEEEEeCCCCCHHHHHHHc---cccCCHHHHHHHHHHHHHHHHHHH---hCCCCCCccchheEEECCCCeEEECCCC
Confidence 3578999999999999999743 235888999999999999999999 8899999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhh
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEA 394 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~ 394 (484)
+++....... ........++..|+|||++.+..++.++|||||||++|||+| |+.||...... .....+...
T Consensus 161 ~a~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~~ 233 (325)
T 3kex_A 161 VADLLPPDDK-----QLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA--EVPDLLEKG 233 (325)
T ss_dssp GGGGSCCCTT-----CCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT--HHHHHHHTT
T ss_pred cccccCcccc-----cccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHH--HHHHHHHcC
Confidence 9987644321 112233457889999999998899999999999999999999 99999764221 111111110
Q ss_pred cchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHHHH
Q 011508 395 LPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRNKL 470 (484)
Q Consensus 395 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~ 470 (484)
.. .. .+..++..+.+++..||+.||.+|||+.|+++.|+.+....
T Consensus 234 ~~--------~~-----------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~~ 278 (325)
T 3kex_A 234 ER--------LA-----------------------QPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARDP 278 (325)
T ss_dssp CB--------CC-----------------------CCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTSH
T ss_pred CC--------CC-----------------------CCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 00 00 01112445778999999999999999999999999886543
No 129
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.8e-44 Score=344.16 Aligned_cols=273 Identities=23% Similarity=0.323 Sum_probs=188.6
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHc--CCCCCceeEeeeeeeeccCCCc
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRS--IRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~~~~~~~~~~~ 236 (484)
++|.+.+.||+|+||.||+|++. ++.||||+++.. ....+.+|.+++.. ++||||+++++++.... ....
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~----~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~-~~~~ 74 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWR----GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDN-GTWT 74 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CT----TSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEEC-SSSE
T ss_pred ceeeehhhccCCCCeEEEEEEEc----CcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCC-Cccc
Confidence 57999999999999999999743 578999998643 34567788888887 79999999999875533 2223
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-----CCCCeeecCCCCCCeeecCCCceEE
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHY-----CETPIVHCDLKPSNVLLDGELTAHV 311 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-----~~~~ivH~dlk~~NIll~~~~~~kl 311 (484)
..++||||+++|+|.+++... .+++..++.++.|++.||+|||.. ++++|+||||||+||+++.++.+||
T Consensus 75 ~~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl 149 (303)
T 3gxj_A 75 QLWLVSDYHEHGSLFDYLNRY-----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCI 149 (303)
T ss_dssp EEEEEEECCTTCCHHHHHHHC-----CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-B
T ss_pred eeEEEEeccCCCCHHHHHhcc-----CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEE
Confidence 679999999999999999743 377888999999999999999932 1579999999999999999999999
Q ss_pred cccCcccccccccccCCCCccccccccccccccCccccCCC------CCCcccceehhhHHHHHHHhC----------CC
Q 011508 312 SDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGS------EVSTSGDVYSFGILLLEMFTG----------KG 375 (484)
Q Consensus 312 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~------~~~~~~Dvws~Gvvl~elltg----------~~ 375 (484)
+|||++.......... ........||+.|+|||++.+. .++.++|||||||++|||+|| +.
T Consensus 150 ~DFg~a~~~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~ 226 (303)
T 3gxj_A 150 ADLGLAVRHDSATDTI---DIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQL 226 (303)
T ss_dssp CCCCC-CCEETTTTEE---SCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCC
T ss_pred eecCcceeccCCCccc---ccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeec
Confidence 9999997654332111 1112234699999999998776 455789999999999999999 45
Q ss_pred CCCCCccCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCC
Q 011508 376 PTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMN 455 (484)
Q Consensus 376 p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt 455 (484)
||............. ...+....+..... ......+++..+.+++.+||+.||++|||
T Consensus 227 p~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~--------------~~~~~~~~~~~l~~li~~cl~~dP~~Rps 284 (303)
T 3gxj_A 227 PYYDLVPSDPSVEEM--------RKVVCEQKLRPNIP--------------NRWQSCEALRVMAKIMRECWYANGAARLT 284 (303)
T ss_dssp TTTTTCC-CCCCC-C--------HHHHTTSCCCCCCC--------------GGGGSSHHHHHHHHHHHTTCCSSGGGSCC
T ss_pred cccccCCCCccHHHH--------HHHHHHhhcCCCcc--------------ccccchhhHHHHHHHHHHHhccCcccCCC
Confidence 554322211111111 11111111111110 00112355778999999999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 011508 456 MEEVAAQLLSFRNK 469 (484)
Q Consensus 456 ~~evl~~L~~i~~~ 469 (484)
++||++.|+.+.++
T Consensus 285 ~~~i~~~L~~l~~~ 298 (303)
T 3gxj_A 285 ALRIKKTLSQLSQQ 298 (303)
T ss_dssp HHHHHHHHHC-CCC
T ss_pred HHHHHHHHHHhhhh
Confidence 99999999987543
No 130
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3.1e-43 Score=342.03 Aligned_cols=265 Identities=22% Similarity=0.279 Sum_probs=198.8
Q ss_pred HHHhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeecc-----CccchHHHHHHHHHHHcCCCCCceeEeeeee
Q 011508 154 LFKATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQ-----HRGASKSFIAECQALRSIRHRNLVKIITSCV 228 (484)
Q Consensus 154 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~ 228 (484)
+....++|++.+.||+|+||.||+|+. ..++..||+|++... .....+.+.+|++++++++||||+++++++.
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~--~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~ 98 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIE--NQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYE 98 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEE--TTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred hhhhhhheeecceeeecCCeEEEEEEE--CCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhc
Confidence 345567899999999999999999984 446788999998753 2334568899999999999999999999963
Q ss_pred eeccCCCceeeEEeecccCCCHHHHHhhcCCC------------------------------------CCCCCHHHHHHH
Q 011508 229 SVDFQGNDFEALVYELMVNGSLEEWLHLNRDA------------------------------------PRNLNLLQRLSI 272 (484)
Q Consensus 229 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~------------------------------------~~~l~~~~~~~i 272 (484)
.....++||||+++|+|.+++...... ...+++..++.+
T Consensus 99 -----~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 173 (345)
T 3hko_A 99 -----DEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNI 173 (345)
T ss_dssp -----CSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHH
T ss_pred -----cCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHH
Confidence 445889999999999999998531111 112467788899
Q ss_pred HHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCC--ceEEcccCcccccccccccCCCCccccccccccccccCccccC
Q 011508 273 AVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGEL--TAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGM 350 (484)
Q Consensus 273 ~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~--~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~ 350 (484)
+.|++.||+||| +.+|+||||||+||+++.++ .+||+|||++..+...... .........||+.|+|||++.
T Consensus 174 ~~qi~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~ 247 (345)
T 3hko_A 174 MRQIFSALHYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNG---EYYGMTTKAGTPYFVAPEVLN 247 (345)
T ss_dssp HHHHHHHHHHHH---HTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC-----------CCCGGGCCHHHHT
T ss_pred HHHHHHHHHHHH---HCCccccCCChhhEEEecCCCceEEEeeccccccccccCcc---ccccccccCCCccccCchhhc
Confidence 999999999999 88999999999999998776 8999999999866432211 111123456999999999986
Q ss_pred C--CCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccc
Q 011508 351 G--SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRS 428 (484)
Q Consensus 351 ~--~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~ 428 (484)
+ ..++.++|||||||++|||++|+.||...... .... .+.........
T Consensus 248 ~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-----~~~~--------~~~~~~~~~~~----------------- 297 (345)
T 3hko_A 248 TTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDA-----DTIS--------QVLNKKLCFEN----------------- 297 (345)
T ss_dssp CSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHH--------HHHHCCCCTTS-----------------
T ss_pred cCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChH-----HHHH--------HHHhcccccCC-----------------
Confidence 5 67899999999999999999999999753211 1111 11111110000
Q ss_pred cchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 429 FGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 429 ~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
.....++..+.+++.+||+.||++|||+.|+++
T Consensus 298 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 330 (345)
T 3hko_A 298 PNYNVLSPLARDLLSNLLNRNVDERFDAMRALQ 330 (345)
T ss_dssp GGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHH
T ss_pred cccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 001123567899999999999999999999986
No 131
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.7e-43 Score=339.41 Aligned_cols=243 Identities=22% Similarity=0.339 Sum_probs=198.0
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCcc--------chHHHHHHHHHHHcCCCCCceeEeeeeee
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRG--------ASKSFIAECQALRSIRHRNLVKIITSCVS 229 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~e~~~l~~l~h~niv~~~~~~~~ 229 (484)
.++|++.+.||+|+||.||+|+. ..+++.||||+++..... ....+.+|+.++++++||||+++++++
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~a~~--~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~-- 98 (335)
T 3dls_A 23 SQKYSTMSPLGSGAFGFVWTAVD--KEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIF-- 98 (335)
T ss_dssp HHHEEEEEECSSSSSCSEEEEEE--TTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEE--
T ss_pred ccceEEEeEEEecCCEEEEEEEE--CCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEE--
Confidence 46799999999999999999984 446789999999765321 224577899999999999999999985
Q ss_pred eccCCCceeeEEeecccCC-CHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCc
Q 011508 230 VDFQGNDFEALVYELMVNG-SLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELT 308 (484)
Q Consensus 230 ~~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~ 308 (484)
......++||||+.+| +|.+++... ..+++..++.++.|++.||+||| +++|+||||||+||+++.++.
T Consensus 99 ---~~~~~~~lv~e~~~~g~~l~~~~~~~----~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~ 168 (335)
T 3dls_A 99 ---ENQGFFQLVMEKHGSGLDLFAFIDRH----PRLDEPLASYIFRQLVSAVGYLR---LKDIIHRDIKDENIVIAEDFT 168 (335)
T ss_dssp ---ECSSEEEEEEECCTTSCBHHHHHHTC----CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSC
T ss_pred ---eeCCEEEEEEEeCCCCccHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---hCCeEEeccCHHHEEEcCCCc
Confidence 3455889999999777 999999743 35899999999999999999999 899999999999999999999
Q ss_pred eEEcccCcccccccccccCCCCccccccccccccccCccccCCCCC-CcccceehhhHHHHHHHhCCCCCCCCccCCccH
Q 011508 309 AHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEV-STSGDVYSFGILLLEMFTGKGPTNEMFTGNLTL 387 (484)
Q Consensus 309 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~ 387 (484)
+||+|||++....... ......||+.|+|||++.+..+ +.++|||||||++|||++|+.||.....
T Consensus 169 ~kL~Dfg~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~----- 235 (335)
T 3dls_A 169 IKLIDFGSAAYLERGK--------LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE----- 235 (335)
T ss_dssp EEECCCTTCEECCTTC--------CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG-----
T ss_pred EEEeecccceECCCCC--------ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH-----
Confidence 9999999998764321 1223568999999999888776 8899999999999999999999964211
Q ss_pred hHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 388 HNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 388 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
........ +..++.++.+++.+||+.||++|||+.|+++.
T Consensus 236 --------------~~~~~~~~---------------------~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 236 --------------TVEAAIHP---------------------PYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp --------------GTTTCCCC---------------------SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred --------------HHhhccCC---------------------CcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000000 11125578999999999999999999999875
No 132
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=2.9e-43 Score=332.79 Aligned_cols=253 Identities=24% Similarity=0.302 Sum_probs=195.1
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
++|.+.+.||+|+||.||+|... .++..+|+|++..... ...+.+.+|++++++++||||+++++++. ....
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-----~~~~ 94 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEER--SSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFE-----DYHN 94 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEET--TTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEE-----CSSE
T ss_pred hheeecceeccCCCeEEEEEEEc--cCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHhee-----cCCe
Confidence 46889999999999999999843 4578899999876543 34578899999999999999999999953 4457
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeee---cCCCceEEccc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLL---DGELTAHVSDF 314 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll---~~~~~~kl~Df 314 (484)
.++||||+++|+|.+++.........+++..++.++.|++.||+||| +++|+||||||+||++ +.++.+||+||
T Consensus 95 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dikp~NIl~~~~~~~~~~kl~Df 171 (285)
T 3is5_A 95 MYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDF 171 (285)
T ss_dssp EEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEESSSSTTCCEEECCC
T ss_pred EEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCCCHHHEEEecCCCCCCEEEEee
Confidence 89999999999999998754433456999999999999999999999 8999999999999999 45678999999
Q ss_pred CcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhh
Q 011508 315 GLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEA 394 (484)
Q Consensus 315 g~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 394 (484)
|++....... ......||..|+|||++. ..++.++||||||+++|||++|+.||...... ......
T Consensus 172 g~a~~~~~~~--------~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~-----~~~~~~ 237 (285)
T 3is5_A 172 GLAELFKSDE--------HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLE-----EVQQKA 237 (285)
T ss_dssp CCCCC------------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHHHH
T ss_pred ecceecCCcc--------cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHH-----HHHhhh
Confidence 9998653321 122346899999999876 46899999999999999999999999753211 111100
Q ss_pred cchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 395 LPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 395 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
. ...+..... ......++.+++.+||+.||++|||+.|+++
T Consensus 238 ~------~~~~~~~~~--------------------~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 238 T------YKEPNYAVE--------------------CRPLTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp H------HCCCCCCC----------------------CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred c------cCCcccccc--------------------cCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 000000000 0011456889999999999999999999975
No 133
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=2.5e-42 Score=327.31 Aligned_cols=252 Identities=27% Similarity=0.384 Sum_probs=197.1
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC--ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCc
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH--RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
..|.+.+.||+|+||.||+|... .++..||+|++.... ....+.+.+|+.++++++||||+++++++.... .+..
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~--~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~~ 102 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDT--ETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTV-KGKK 102 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEET--TTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEES-SSCE
T ss_pred eeEEeeeeccCCCCeEEEEeEec--CCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecccc-CCCc
Confidence 34778889999999999999844 467889999987543 233467889999999999999999999875432 4456
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eeecCCCCCCeeec-CCCceEEcc
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETP--IVHCDLKPSNVLLD-GELTAHVSD 313 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~dlk~~NIll~-~~~~~kl~D 313 (484)
..++||||+++++|.+++... ..+++..++.++.|++.||+||| +.+ |+||||||+||+++ .++.+||+|
T Consensus 103 ~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~kl~D 175 (290)
T 1t4h_A 103 CIVLVTELMTSGTLKTYLKRF----KVMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGD 175 (290)
T ss_dssp EEEEEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCSCCCGGGEEESSTTSCEEECC
T ss_pred eEEEEEEecCCCCHHHHHHHc----cCCCHHHHHHHHHHHHHHHHHHH---cCCCCEEECCCCHHHEEEECCCCCEEEee
Confidence 789999999999999999754 34889999999999999999999 777 99999999999997 788999999
Q ss_pred cCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHh
Q 011508 314 FGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKE 393 (484)
Q Consensus 314 fg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 393 (484)
||++...... ......|++.|+|||++.+ .++.++||||||+++|+|++|+.||...... ......
T Consensus 176 fg~~~~~~~~---------~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~----~~~~~~ 241 (290)
T 1t4h_A 176 LGLATLKRAS---------FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNA----AQIYRR 241 (290)
T ss_dssp TTGGGGCCTT---------SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH----HHHHHH
T ss_pred CCCccccccc---------ccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcH----HHHHHH
Confidence 9999754221 1223468999999998764 5899999999999999999999999653221 111111
Q ss_pred hcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 394 ALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 394 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
.... ..+.. .+..++.++.+++..||+.||.+|||+.|+++
T Consensus 242 ~~~~-----~~~~~----------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 242 VTSG-----VKPAS----------------------FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp HTTT-----CCCGG----------------------GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred Hhcc-----CCccc----------------------cCCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 0000 00000 01112456899999999999999999999985
No 134
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=4e-43 Score=331.63 Aligned_cols=260 Identities=23% Similarity=0.373 Sum_probs=204.7
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeecc-----
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDF----- 232 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~----- 232 (484)
..+|++.+.||+|+||.||+|+.. .+++.||+|++.... +.+.+|++++++++||||+++++++....+
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 83 (284)
T 2a19_B 10 GMDFKEIELIGSGGFGQVFKAKHR--IDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETS 83 (284)
T ss_dssp HHHEEEEEEEECSSSCCEEEEEET--TTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC----
T ss_pred ccccceeeeeccCCceEEEEEEEc--CCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccc
Confidence 356889999999999999999954 357889999997543 456789999999999999999998754322
Q ss_pred ------CCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCC
Q 011508 233 ------QGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGE 306 (484)
Q Consensus 233 ------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~ 306 (484)
......++||||+++++|.+++.... ...+++..++.++.|++.||+||| +++|+||||||+||+++.+
T Consensus 84 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~ 158 (284)
T 2a19_B 84 SKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR--GEKLDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDT 158 (284)
T ss_dssp -----CCEEEEEEEEECCCCSCBHHHHHHHGG--GSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEET
T ss_pred cccccccCcceEEEEEeccCCCCHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHEEEcCC
Confidence 12446799999999999999997543 235899999999999999999999 8899999999999999999
Q ss_pred CceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCcc
Q 011508 307 LTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLT 386 (484)
Q Consensus 307 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~ 386 (484)
+.+||+|||++....... ......+++.|+|||.+.+..++.++||||||+++|||++|..|+...
T Consensus 159 ~~~kl~Dfg~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~------ 224 (284)
T 2a19_B 159 KQVKIGDFGLVTSLKNDG--------KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET------ 224 (284)
T ss_dssp TEEEECCCTTCEESSCCS--------CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH------
T ss_pred CCEEECcchhheeccccc--------cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH------
Confidence 999999999998764321 122345899999999999889999999999999999999999886421
Q ss_pred HhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHH
Q 011508 387 LHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSF 466 (484)
Q Consensus 387 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i 466 (484)
..... .+.+..+ +..++..+.+++..||+.||++|||+.|+++.|+.+
T Consensus 225 -~~~~~--------~~~~~~~-----------------------~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~ 272 (284)
T 2a19_B 225 -SKFFT--------DLRDGII-----------------------SDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVW 272 (284)
T ss_dssp -HHHHH--------HHHTTCC-----------------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -HHHHH--------Hhhcccc-----------------------cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 01110 1111111 011245678999999999999999999999999999
Q ss_pred HHHHhhcc
Q 011508 467 RNKLVKNV 474 (484)
Q Consensus 467 ~~~~~~~~ 474 (484)
+....++.
T Consensus 273 ~~~~~~~~ 280 (284)
T 2a19_B 273 KKSPEKNE 280 (284)
T ss_dssp TC------
T ss_pred hhCCCccc
Confidence 87665543
No 135
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=8.4e-43 Score=336.33 Aligned_cols=263 Identities=25% Similarity=0.381 Sum_probs=204.3
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC-ccchHHHHHHHHHHHcC-CCCCceeEeeeeeeeccCCCc
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH-RGASKSFIAECQALRSI-RHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 236 (484)
++|++.+.||+|+||.||+|+...++....+|+|.++... ....+.+.+|+++++++ +||||+++++++.. .+
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~-----~~ 99 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH-----RG 99 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEE-----TT
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeee-----CC
Confidence 5789999999999999999996654333356999887532 23446789999999999 99999999999643 45
Q ss_pred eeeEEeecccCCCHHHHHhhcC------------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeec
Q 011508 237 FEALVYELMVNGSLEEWLHLNR------------DAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLD 304 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~------------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~ 304 (484)
..++||||+++++|.+++.... .....+++..++.++.|++.||+||| +++|+||||||+||+++
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~ 176 (327)
T 1fvr_A 100 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVG 176 (327)
T ss_dssp EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEC
T ss_pred ceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCccceEEEc
Confidence 7899999999999999997543 22346899999999999999999999 89999999999999999
Q ss_pred CCCceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccC
Q 011508 305 GELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTG 383 (484)
Q Consensus 305 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~ 383 (484)
.++.+||+|||+++...... ......++..|+|||++.+..++.++||||||+++|||++ |+.||.....
T Consensus 177 ~~~~~kL~Dfg~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~- 247 (327)
T 1fvr_A 177 ENYVAKIADFGLSRGQEVYV--------KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC- 247 (327)
T ss_dssp GGGCEEECCTTCEESSCEEC--------CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH-
T ss_pred CCCeEEEcccCcCccccccc--------cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcH-
Confidence 99999999999987442211 1122346789999999988889999999999999999998 9999965321
Q ss_pred CccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHH
Q 011508 384 NLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQL 463 (484)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 463 (484)
....... .. -.... .+..++..+.+++.+||+.||++|||+.|+++.|
T Consensus 248 ----~~~~~~~-~~----~~~~~-----------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L 295 (327)
T 1fvr_A 248 ----AELYEKL-PQ----GYRLE-----------------------KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSL 295 (327)
T ss_dssp ----HHHHHHG-GG----TCCCC-----------------------CCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred ----HHHHHHh-hc----CCCCC-----------------------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 1111110 00 00000 0122356789999999999999999999999999
Q ss_pred HHHHHHH
Q 011508 464 LSFRNKL 470 (484)
Q Consensus 464 ~~i~~~~ 470 (484)
+.+....
T Consensus 296 ~~~~~~~ 302 (327)
T 1fvr_A 296 NRMLEER 302 (327)
T ss_dssp HHHHHSS
T ss_pred HHHHHhh
Confidence 9987654
No 136
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=8.2e-43 Score=327.97 Aligned_cols=247 Identities=25% Similarity=0.349 Sum_probs=178.2
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
++|++.+.||+|+||.||+|+ +..+++.||+|++.... ....+.+.+|+.+++.++||||+++++++. ..
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~ 85 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAY--HTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIK-----SK 85 (275)
T ss_dssp CCBCCCC---------EEEEE--CTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEE-----CS
T ss_pred cceEEEEEEEcCCCEEEEEEE--ECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEe-----cC
Confidence 579999999999999999998 55567899999987543 233467889999999999999999999864 34
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
+..++||||+ +++|.+++... ..+++..++.++.|++.||+||| +++|+||||||+||++++++.+||+|||
T Consensus 86 ~~~~lv~e~~-~~~l~~~~~~~----~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg 157 (275)
T 2eue_A 86 DEIIMVIEYA-GNELFDYIVQR----DKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFG 157 (275)
T ss_dssp SCEEEEEECC-CEEHHHHHHTS----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCSS
T ss_pred CeEEEEehhc-CCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCCeeccCChHhEEECCCCCEEEeecc
Confidence 5789999999 77888888643 35899999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCCCCC-CcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhh
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEV-STSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEA 394 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 394 (484)
++....... ......||..|+|||.+.+..+ +.++||||||+++|||++|+.||..... .......
T Consensus 158 ~~~~~~~~~--------~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~~~~~~~ 224 (275)
T 2eue_A 158 LSNIMTDGN--------FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI-----PVLFKNI 224 (275)
T ss_dssp CC-----------------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHH
T ss_pred cceeccCcc--------cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHH
Confidence 997653321 1223458999999999887765 7899999999999999999999975321 1111110
Q ss_pred cchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 395 LPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 395 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
. ...... +..++..+.+++.+||+.||++|||++|+++.
T Consensus 225 ~--------~~~~~~---------------------~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 225 S--------NGVYTL---------------------PKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp H--------HTCCCC---------------------CTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred H--------hCCCCC---------------------CccCCHHHHHHHHHHhhcCHhHCCCHHHHhhC
Confidence 0 000000 11225568899999999999999999999763
No 137
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=1.9e-42 Score=342.34 Aligned_cols=255 Identities=20% Similarity=0.242 Sum_probs=191.5
Q ss_pred CCCCcc-CccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHc-CCCCCceeEeeeeeeeccCCCc
Q 011508 159 DGFSLE-NLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRS-IRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 159 ~~~~~~-~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~-l~h~niv~~~~~~~~~~~~~~~ 236 (484)
++|.+. +.||+|+||+||+|+. ..+++.||||+++. ...+.+|+.++.+ .+||||+++++++... +.+..
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~--~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~-~~~~~ 132 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFN--KRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENL-YAGRK 132 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEE--TTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEE-ETTEE
T ss_pred ccceeccceeeeccCeEEEEEEE--CCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeec-ccCCc
Confidence 456665 6899999999999994 44678999999863 2467788888754 5899999999986542 23455
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecC---CCceEEcc
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDG---ELTAHVSD 313 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~---~~~~kl~D 313 (484)
..++||||+++|+|.+++.... ...+++..++.++.||+.||+||| +.+|+||||||+|||++. ++.+||+|
T Consensus 133 ~~~lv~E~~~gg~L~~~l~~~~--~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~~~kl~D 207 (400)
T 1nxk_A 133 CLLIVMECLDGGELFSRIQDRG--DQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTD 207 (400)
T ss_dssp EEEEEEECCCSEEHHHHHHCC-----CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSTTCCEEECC
T ss_pred EEEEEEEeCCCCcHHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCcceEEEecCCCCccEEEEe
Confidence 7899999999999999997432 245899999999999999999999 899999999999999987 78999999
Q ss_pred cCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCcc--HhHHH
Q 011508 314 FGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLT--LHNFV 391 (484)
Q Consensus 314 fg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~--~~~~~ 391 (484)
||+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......... ....+
T Consensus 208 FG~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i 279 (400)
T 1nxk_A 208 FGFAKETTSHN--------SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI 279 (400)
T ss_dssp CTTCEECC-------------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHH
T ss_pred cccccccCCCC--------ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHH
Confidence 99998653221 122356899999999999999999999999999999999999999764322110 11111
Q ss_pred HhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 392 KEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 392 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
.. ...... ......++.++.+++.+||+.||++|||+.|+++.
T Consensus 280 ~~-----------~~~~~~-----------------~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 280 RM-----------GQYEFP-----------------NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp HH-----------TCCCCC-----------------TTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred Hc-----------CcccCC-----------------CcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 00 000000 00012235678999999999999999999999874
No 138
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=1.3e-42 Score=349.50 Aligned_cols=283 Identities=19% Similarity=0.174 Sum_probs=197.5
Q ss_pred hcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC--ccchHHHHHHHHHHHcCCCCCceeEeeeeeeecc-C
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH--RGASKSFIAECQALRSIRHRNLVKIITSCVSVDF-Q 233 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~-~ 233 (484)
..++|++.+.||+|+||.||+|+. ..+++.||||++.... ....+.+.+|+.+++.++||||+++++++..... .
T Consensus 60 ~~~~y~~~~~lG~G~~g~V~~a~~--~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~ 137 (464)
T 3ttj_A 60 VLKRYQNLKPIGSGAQGIVCAAYD--AVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLE 137 (464)
T ss_dssp EETTEEEEEEEEECSSCEEEEEEE--TTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTT
T ss_pred ecCCeEEEEEeecCCCeEEEEEEE--CCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccc
Confidence 357899999999999999999984 4467889999997542 2334678899999999999999999998754321 2
Q ss_pred CCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcc
Q 011508 234 GNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSD 313 (484)
Q Consensus 234 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~D 313 (484)
.....++||||+++ +|.+.+. ..+++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+|
T Consensus 138 ~~~~~~lv~E~~~~-~l~~~~~------~~l~~~~~~~~~~qil~aL~~lH---~~~iiHrDlkp~NIll~~~~~~kl~D 207 (464)
T 3ttj_A 138 EFQDVYLVMELMDA-NLCQVIQ------MELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILD 207 (464)
T ss_dssp TCCEEEEEEECCSE-EHHHHHT------SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECC
T ss_pred cCCeEEEEEeCCCC-CHHHHHh------hcCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChHhEEEeCCCCEEEEE
Confidence 33567999999965 5777664 23889999999999999999999 88999999999999999999999999
Q ss_pred cCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHh
Q 011508 314 FGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKE 393 (484)
Q Consensus 314 fg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 393 (484)
||+++..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||.+..... .+...+..
T Consensus 208 FG~a~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~-~~~~i~~~ 278 (464)
T 3ttj_A 208 FGLARTAGTS--------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID-QWNKVIEQ 278 (464)
T ss_dssp CCCC-----C--------CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHH
T ss_pred EEeeeecCCC--------cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHh
Confidence 9999865322 12233578999999999999999999999999999999999999997632111 11111111
Q ss_pred hc---c-------hhhhhhcCcccccccccccchhh-hhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 394 AL---P-------ERLAEIVDPVLLVEREEGETSEA-NAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 394 ~~---~-------~~~~~~~d~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
.. + ......++..... ........ .................++.+|+.+||+.||++|||++|+++.
T Consensus 279 lg~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 279 LGTPCPEFMKKLQPTVRNYVENRPKY--AGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp HCSCCHHHHTTSCHHHHHHHTTSCCC--CCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cCCCCHHHHHHcchhhhhHhhccccc--CCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00 0 0011111100000 00000000 0000000000112235678999999999999999999999863
No 139
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=6.3e-43 Score=337.19 Aligned_cols=278 Identities=27% Similarity=0.377 Sum_probs=208.4
Q ss_pred cCCCCccCccccccceeEEEEEEc---CCCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccC
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFD---HDDHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQ 233 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~---~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 233 (484)
.++|.+.+.||+|+||.||+|++. +..++..||||++..... .....+.+|+.++++++||||+++++++.
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----- 103 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL----- 103 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-----
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEc-----
Confidence 467999999999999999999854 234567899999974432 33457889999999999999999999853
Q ss_pred CCceeeEEeecccCCCHHHHHhhcCCC---CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecC---CC
Q 011508 234 GNDFEALVYELMVNGSLEEWLHLNRDA---PRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDG---EL 307 (484)
Q Consensus 234 ~~~~~~lv~e~~~~gsL~~~l~~~~~~---~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~---~~ 307 (484)
.....++||||+++++|.+++...... ...+++..++.++.|++.||+||| +++|+||||||+||+++. +.
T Consensus 104 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~i~H~dlkp~NIli~~~~~~~ 180 (327)
T 2yfx_A 104 QSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGR 180 (327)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTC
T ss_pred CCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeecCcCCHhHEEEecCCCcc
Confidence 445779999999999999999865422 245899999999999999999999 899999999999999984 44
Q ss_pred ceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCcc
Q 011508 308 TAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLT 386 (484)
Q Consensus 308 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~ 386 (484)
.+||+|||++........ ........+++.|+|||.+.+..++.++||||||+++|||+| |+.||...... .
T Consensus 181 ~~kl~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~ 253 (327)
T 2yfx_A 181 VAKIGDFGMARDIYRASY-----YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--E 253 (327)
T ss_dssp CEEECCCHHHHHHHC-----------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--H
T ss_pred eEEECccccccccccccc-----cccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH--H
Confidence 699999999875532221 111223457889999999988889999999999999999998 99998653111 1
Q ss_pred HhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHH
Q 011508 387 LHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSF 466 (484)
Q Consensus 387 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i 466 (484)
....+... .... .+..++..+.+++..||+.||.+|||+.||++.|+.+
T Consensus 254 ~~~~~~~~--------~~~~-----------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~ 302 (327)
T 2yfx_A 254 VLEFVTSG--------GRMD-----------------------PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC 302 (327)
T ss_dssp HHHHHHTT--------CCCC-----------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHhcC--------CCCC-----------------------CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence 11111000 0000 0122356789999999999999999999999999999
Q ss_pred HHHHhhccCCCccee
Q 011508 467 RNKLVKNVRGQPATY 481 (484)
Q Consensus 467 ~~~~~~~~~~~~~~~ 481 (484)
...........|..|
T Consensus 303 ~~~~~~~~~~~~~~~ 317 (327)
T 2yfx_A 303 TQDPDVINTALPIEY 317 (327)
T ss_dssp HHCHHHHTCCCCCC-
T ss_pred hcCHHHhcccccccc
Confidence 876655444444444
No 140
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.1e-42 Score=340.14 Aligned_cols=212 Identities=27% Similarity=0.398 Sum_probs=179.6
Q ss_pred hhccccHHhHHHhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCC-----CCC
Q 011508 145 SVLRVSYQNLFKATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIR-----HRN 219 (484)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----h~n 219 (484)
....+++.+.....++|.+.+.||+|+||.||+|+.. .+++.||||+++.. ......+..|+.+++.+. |||
T Consensus 21 ~~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~--~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~ 97 (360)
T 3llt_A 21 EIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHI--DNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNN 97 (360)
T ss_dssp GGGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEET--TTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGG
T ss_pred cceeeeeecceEecCEEEEEEEEcccCCeEEEEEEEC--CCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCC
Confidence 3556677766677889999999999999999999954 45788999998643 233456788999999986 999
Q ss_pred ceeEeeeeeeeccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCC
Q 011508 220 LVKIITSCVSVDFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPS 299 (484)
Q Consensus 220 iv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~ 299 (484)
|+++++++.. .+..++||||+ +++|.+++.... ...+++..++.++.||+.||+||| +++|+||||||+
T Consensus 98 iv~~~~~~~~-----~~~~~lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~ 166 (360)
T 3llt_A 98 IVKYHGKFMY-----YDHMCLIFEPL-GPSLYEIITRNN--YNGFHIEDIKLYCIEILKALNYLR---KMSLTHTDLKPE 166 (360)
T ss_dssp BCCEEEEEEE-----TTEEEEEECCC-CCBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGG
T ss_pred eecccceeeE-----CCeeEEEEcCC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCcc
Confidence 9999998644 34889999999 999999998543 235899999999999999999999 899999999999
Q ss_pred CeeecC-------------------------CCceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCC
Q 011508 300 NVLLDG-------------------------ELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEV 354 (484)
Q Consensus 300 NIll~~-------------------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~ 354 (484)
|||++. ++.+||+|||++...... .....||+.|+|||++.+..+
T Consensus 167 NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~----------~~~~~gt~~y~aPE~~~~~~~ 236 (360)
T 3llt_A 167 NILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY----------HGSIINTRQYRAPEVILNLGW 236 (360)
T ss_dssp GEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC----------CCSCCSCGGGCCHHHHTTCCC
T ss_pred cEEEccccccccccchhcccccccccccccCCCCEEEEeccCceecCCC----------CcCccCcccccCcHHHcCCCC
Confidence 999975 789999999999864321 123468999999999999999
Q ss_pred CcccceehhhHHHHHHHhCCCCCCCC
Q 011508 355 STSGDVYSFGILLLEMFTGKGPTNEM 380 (484)
Q Consensus 355 ~~~~Dvws~Gvvl~elltg~~p~~~~ 380 (484)
+.++|||||||++|||++|+.||...
T Consensus 237 ~~~~DiwslG~il~ell~g~~pf~~~ 262 (360)
T 3llt_A 237 DVSSDMWSFGCVLAELYTGSLLFRTH 262 (360)
T ss_dssp CTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred CCccchHHHHHHHHHHHHCCCCCCCC
Confidence 99999999999999999999999763
No 141
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.3e-42 Score=328.88 Aligned_cols=268 Identities=23% Similarity=0.303 Sum_probs=195.6
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCc
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
++|++.+.||+|+||.||+|+.. +++.||+|++..... ...+.+.+|++++++++||||+++++++. ..+
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~---~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~ 73 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNN---YGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIH-----TKK 73 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEET---TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEE-----CSS
T ss_pred ccchhhhhcccCCCEEEEEEEcC---CCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEc-----cCC
Confidence 57889999999999999999853 568899999875432 23467889999999999999999999854 345
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCc
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGL 316 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 316 (484)
..++||||+++ +|.+++... ...+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+
T Consensus 74 ~~~lv~e~~~~-~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 146 (288)
T 1ob3_A 74 RLVLVFEHLDQ-DLKKLLDVC---EGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGL 146 (288)
T ss_dssp CEEEEEECCSE-EHHHHHHTS---TTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCTTH
T ss_pred eEEEEEEecCC-CHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEeECcc
Confidence 88999999964 999998743 245899999999999999999999 89999999999999999999999999999
Q ss_pred ccccccccccCCCCccccccccccccccCccccCC-CCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhc
Q 011508 317 AKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEAL 395 (484)
Q Consensus 317 a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 395 (484)
+....... .......+|+.|+|||++.+ ..++.++|||||||++|||++|+.||....... .+........
T Consensus 147 ~~~~~~~~-------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~ 218 (288)
T 1ob3_A 147 ARAFGIPV-------RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD-QLMRIFRILG 218 (288)
T ss_dssp HHHHCC----------------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHC
T ss_pred ccccCccc-------cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHHC
Confidence 97653221 11223458999999999876 458999999999999999999999997642211 1111111100
Q ss_pred ch---hhhh-----hcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 396 PE---RLAE-----IVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 396 ~~---~~~~-----~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
.. .... ..++.+.... +.........++.++.+++.+||+.||++|||++|+++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 219 TPNSKNWPNVTELPKYDPNFTVYE------------PLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp CCCTTTSTTGGGSTTCCTTCCCCC------------CCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCChhhchhhhccccccccccccc------------CccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00 0000 0000000000 00000001223567899999999999999999999975
No 142
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.5e-42 Score=331.74 Aligned_cols=262 Identities=19% Similarity=0.229 Sum_probs=196.3
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCcc---chHHHHHHHHHHHcCCCCCceeEeeeeeeeccCC
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRG---ASKSFIAECQALRSIRHRNLVKIITSCVSVDFQG 234 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 234 (484)
-++|.+.+.||+|+||.||+|+.. .+++.||+|++...... ..+.+.+|+.++++++||||+++++++..
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~----- 105 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDT--VRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEI----- 105 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEET--TTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE-----
T ss_pred eccEEEEEEEcCCCCeeEEEEEEc--CCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEee-----
Confidence 378999999999999999999844 45788999999754322 23678899999999999999999998643
Q ss_pred CceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEccc
Q 011508 235 NDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDF 314 (484)
Q Consensus 235 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 314 (484)
++..++||||+++++|.+++.... .+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+||
T Consensus 106 ~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~NIl~~~~~~~kl~Df 178 (309)
T 2h34_A 106 DGQLYVDMRLINGVDLAAMLRRQG----PLAPPRAVAIVRQIGSALDAAH---AAGATHRDVKPENILVSADDFAYLVDF 178 (309)
T ss_dssp TTEEEEEEECCCCEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSC
T ss_pred CCeEEEEEEecCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCcCCcCCCChHHEEEcCCCCEEEecC
Confidence 447899999999999999997542 4899999999999999999999 899999999999999999999999999
Q ss_pred CcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhh
Q 011508 315 GLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEA 394 (484)
Q Consensus 315 g~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 394 (484)
|++....... ........|+..|+|||.+.+..++.++||||||+++|||++|+.||...... .....
T Consensus 179 g~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~~~~ 246 (309)
T 2h34_A 179 GIASATTDEK------LTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS------VMGAH 246 (309)
T ss_dssp CC----------------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH------HHHHH
T ss_pred ccCccccccc------cccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH------HHHHH
Confidence 9987654321 11122346899999999999999999999999999999999999999753211 11110
Q ss_pred cchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCC-CHHHHHHHHHHHHHHH
Q 011508 395 LPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERM-NMEEVAAQLLSFRNKL 470 (484)
Q Consensus 395 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-t~~evl~~L~~i~~~~ 470 (484)
. ........ .....++..+.+++.+||+.||++|| |++++++.|+.+....
T Consensus 247 ~----~~~~~~~~---------------------~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~ 298 (309)
T 2h34_A 247 I----NQAIPRPS---------------------TVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATA 298 (309)
T ss_dssp H----HSCCCCGG---------------------GTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC--
T ss_pred h----ccCCCCcc---------------------ccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhh
Confidence 0 00000000 00122355788999999999999999 9999999998765444
No 143
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=5.2e-43 Score=364.87 Aligned_cols=256 Identities=27% Similarity=0.391 Sum_probs=202.3
Q ss_pred CccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCceeeEEe
Q 011508 165 NLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFEALVY 242 (484)
Q Consensus 165 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~ 242 (484)
+.||+|+||.||+|.+.....++.||||+++.... ...+.+.+|++++++++||||++++++|. .+..++||
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~------~~~~~lv~ 448 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE------AESWMLVM 448 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE------SSSEEEEE
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe------cCCEEEEE
Confidence 47999999999999887777789999999975432 23478999999999999999999999863 22478999
Q ss_pred ecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccccccc
Q 011508 243 ELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFLPE 322 (484)
Q Consensus 243 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~~~ 322 (484)
||+++|+|.+++... ..+++..++.++.||+.||+||| +++|+||||||+|||++.++.+||+|||+++.+..
T Consensus 449 E~~~~g~L~~~l~~~----~~l~~~~~~~i~~qi~~~L~yLH---~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~ 521 (635)
T 4fl3_A 449 EMAELGPLNKYLQQN----RHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 521 (635)
T ss_dssp ECCTTEEHHHHHHHC----TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC
T ss_pred EccCCCCHHHHHhhC----CCCCHHHHHHHHHHHHHHHHHHH---HCCEeCCCCChHhEEEeCCCCEEEEEcCCcccccc
Confidence 999999999999743 35899999999999999999999 89999999999999999999999999999987644
Q ss_pred ccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhhcchhhhh
Q 011508 323 AANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEALPERLAE 401 (484)
Q Consensus 323 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (484)
.... ........+|..|+|||++.+..++.++|||||||++|||++ |+.||...... .+...+..
T Consensus 522 ~~~~----~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--~~~~~i~~-------- 587 (635)
T 4fl3_A 522 DENY----YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--EVTAMLEK-------- 587 (635)
T ss_dssp -----------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHHHHHT--------
T ss_pred Cccc----cccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHc--------
Confidence 3211 111223346789999999998899999999999999999998 99999764221 11111110
Q ss_pred hcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHHHH
Q 011508 402 IVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRNKL 470 (484)
Q Consensus 402 ~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~ 470 (484)
.... ..+..|+.++.+++..||+.||++|||+.+|++.|+++...+
T Consensus 588 ~~~~-----------------------~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~l 633 (635)
T 4fl3_A 588 GERM-----------------------GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDV 633 (635)
T ss_dssp TCCC-----------------------CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred CCCC-----------------------CCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHh
Confidence 0000 002334678999999999999999999999999999887654
No 144
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=5.6e-43 Score=334.98 Aligned_cols=245 Identities=25% Similarity=0.282 Sum_probs=189.3
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCcc--chHHHHHHHHHHHcC-CCCCceeEeeeeeeeccCCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRG--ASKSFIAECQALRSI-RHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~ 235 (484)
++|++.++||+|+||+||+|+.. .+++.||||++...... ....+..|+..+.++ +||||++++++|. .+
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~-----~~ 129 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSK--EDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWE-----EG 129 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEET--TTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-----ET
T ss_pred hheeeeheeccCCCeEEEEEEEC--CCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEE-----eC
Confidence 57899999999999999999954 35788999998654322 223455666666555 9999999999964 34
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
...++||||+ +++|.+++.... ..+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||
T Consensus 130 ~~~~lv~e~~-~~~L~~~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~DFG 202 (311)
T 3p1a_A 130 GILYLQTELC-GPSLQQHCEAWG---ASLPEAQVWGYLRDTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFG 202 (311)
T ss_dssp TEEEEEEECC-CCBHHHHHHHHC---SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECGGGCEEECCCT
T ss_pred CEEEEEEecc-CCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEccce
Confidence 5889999999 789999987543 35999999999999999999999 8899999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhc
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEAL 395 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 395 (484)
++....... ......||+.|+|||++.+ .++.++|||||||++|||++|..|+... ...........
T Consensus 203 ~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~----~~~~~~~~~~~ 269 (311)
T 3p1a_A 203 LLVELGTAG--------AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGG----EGWQQLRQGYL 269 (311)
T ss_dssp TCEECC--------------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSH----HHHHHHTTTCC
T ss_pred eeeecccCC--------CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCc----cHHHHHhccCC
Confidence 987653321 1223458999999998876 7899999999999999999997766431 01111100000
Q ss_pred chhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 396 PERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 396 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
+. .+ +..++.++.+++.+||+.||++|||++|+++
T Consensus 270 ~~--------~~-----------------------~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 270 PP--------EF-----------------------TAGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp CH--------HH-----------------------HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred Cc--------cc-----------------------ccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 00 00 1123567899999999999999999999985
No 145
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=2.4e-42 Score=332.26 Aligned_cols=252 Identities=21% Similarity=0.269 Sum_probs=200.4
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCcc------chHHHHHHHHHHHcCCCCCceeEeeeeeeec
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRG------ASKSFIAECQALRSIRHRNLVKIITSCVSVD 231 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~ 231 (484)
.++|++.+.||+|+||.||+|+.. .++..||+|+++..... ..+.+.+|+.++++++||||+++++++.
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~--- 85 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREK--STGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYE--- 85 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEET--TTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEE---
T ss_pred hccEEEeeEeeecCCEEEEEEEEC--CCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEe---
Confidence 356899999999999999999944 45788999999764322 2467899999999999999999999853
Q ss_pred cCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCC----
Q 011508 232 FQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGEL---- 307 (484)
Q Consensus 232 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~---- 307 (484)
.....++||||+++++|.+++... ..+++..++.++.|++.||+||| +++|+||||||+||+++.++
T Consensus 86 --~~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~aL~~lH---~~~ivH~dikp~NIl~~~~~~~~~ 156 (321)
T 2a2a_A 86 --NRTDVVLILELVSGGELFDFLAQK----ESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIP 156 (321)
T ss_dssp --CSSEEEEEECCCCSCBHHHHHHTC----SCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSC
T ss_pred --cCCEEEEEEEcCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChHHEEEecCCCCcC
Confidence 445889999999999999999742 35899999999999999999999 89999999999999999887
Q ss_pred ceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccH
Q 011508 308 TAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTL 387 (484)
Q Consensus 308 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~ 387 (484)
.+||+|||++....... ......||+.|+|||++.+..++.++||||||+++|+|++|+.||......
T Consensus 157 ~~kl~Dfg~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---- 224 (321)
T 2a2a_A 157 HIKLIDFGLAHEIEDGV--------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ---- 224 (321)
T ss_dssp CEEECCCTTCEECCTTC--------CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH----
T ss_pred CEEEccCccceecCccc--------cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHH----
Confidence 79999999998664321 112346899999999999999999999999999999999999999653211
Q ss_pred hHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 388 HNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 388 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
..... +.......... ....++..+.+++.+||+.||++|||+.|+++
T Consensus 225 -~~~~~--------i~~~~~~~~~~-----------------~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 225 -ETLAN--------ITSVSYDFDEE-----------------FFSHTSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp -HHHHH--------HHTTCCCCCHH-----------------HHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred -HHHHH--------HHhcccccChh-----------------hhcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 11110 00000000000 01122557889999999999999999999986
No 146
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=1.6e-42 Score=326.33 Aligned_cols=252 Identities=23% Similarity=0.279 Sum_probs=200.8
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
.++|++.+.||+|+||.||+|+.. .++..||+|++........+.+.+|++++++++||||+++++++. .+..
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~~~~ 80 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQK--GTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFE-----DNTD 80 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEET--TTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEE-----CSSE
T ss_pred hhhEEeeeEEeecCCEEEEEEEeC--CCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEe-----cCCe
Confidence 356899999999999999999854 456789999998766666788999999999999999999999854 4557
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeee---cCCCceEEccc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLL---DGELTAHVSDF 314 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll---~~~~~~kl~Df 314 (484)
.++||||+++++|.+++.... .+++..++.++.|++.||+||| +++|+||||||+||++ +.++.+||+||
T Consensus 81 ~~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~~l~Df 153 (277)
T 3f3z_A 81 IYLVMELCTGGELFERVVHKR----VFRESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDF 153 (277)
T ss_dssp EEEEEECCCSCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCC
T ss_pred EEEEEeccCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEecCCCCCcEEEEec
Confidence 899999999999999987543 4899999999999999999999 8999999999999999 78889999999
Q ss_pred CcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhh
Q 011508 315 GLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEA 394 (484)
Q Consensus 315 g~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 394 (484)
|++....... ......||+.|+|||.+.+. ++.++||||||+++|||++|+.||...... .....
T Consensus 154 g~~~~~~~~~--------~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-----~~~~~- 218 (277)
T 3f3z_A 154 GLAARFKPGK--------MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDS-----EVMLK- 218 (277)
T ss_dssp TTCEECCTTS--------CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHHH-
T ss_pred ccceeccCcc--------chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHH-----HHHHH-
Confidence 9998654321 12234689999999988654 899999999999999999999999753211 11100
Q ss_pred cchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 395 LPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 395 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
+....... +. .....++..+.+++.+||+.||++|||+.|+++.
T Consensus 219 -------~~~~~~~~-~~----------------~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 262 (277)
T 3f3z_A 219 -------IREGTFTF-PE----------------KDWLNVSPQAESLIRRLLTKSPKQRITSLQALEH 262 (277)
T ss_dssp -------HHHCCCCC-CH----------------HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred -------HHhCCCCC-Cc----------------hhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000000 00 0011235678999999999999999999999863
No 147
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.5e-42 Score=335.90 Aligned_cols=271 Identities=20% Similarity=0.232 Sum_probs=193.6
Q ss_pred hcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCC-CCCceeEeeeeeeecc---
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIR-HRNLVKIITSCVSVDF--- 232 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~--- 232 (484)
...+|++.+.||+|+||.||+|+.. .+++.||+|++........+.+.+|+.++.++. ||||+++++++.....
T Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 103 (337)
T 3ll6_A 26 GELRLRVRRVLAEGGFAFVYEAQDV--GSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESD 103 (337)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEEET--TTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTST
T ss_pred cCceEEEEEEEccCCceEEEEEEEC--CCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccc
Confidence 3457899999999999999999953 457889999987666555678899999999995 9999999998753321
Q ss_pred CCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eeecCCCCCCeeecCCCceE
Q 011508 233 QGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETP--IVHCDLKPSNVLLDGELTAH 310 (484)
Q Consensus 233 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~dlk~~NIll~~~~~~k 310 (484)
......++||||+ +|+|.+++..... ...+++..++.++.|++.||+||| +.+ |+||||||+||+++.++.+|
T Consensus 104 ~~~~~~~lv~e~~-~g~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH---~~~~~ivH~Dikp~NIl~~~~~~~k 178 (337)
T 3ll6_A 104 TGQAEFLLLTELC-KGQLVEFLKKMES-RGPLSCDTVLKIFYQTCRAVQHMH---RQKPPIIHRDLKVENLLLSNQGTIK 178 (337)
T ss_dssp TSSEEEEEEEECC-SEEHHHHHHHHHT-TCSCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCCCCCGGGCEECTTSCEE
T ss_pred cCCceEEEEEEec-CCCHHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHH---hCCCCEEEccCCcccEEECCCCCEE
Confidence 3455689999999 5799999875332 335999999999999999999999 788 99999999999999999999
Q ss_pred EcccCcccccccccccCCCC-----ccccccccccccccCcccc---CCCCCCcccceehhhHHHHHHHhCCCCCCCCcc
Q 011508 311 VSDFGLAKFLPEAANNLSSN-----QSSSVGVKGTVGYAAPEYG---MGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFT 382 (484)
Q Consensus 311 l~Dfg~a~~~~~~~~~~~~~-----~~~~~~~~g~~~y~aPE~~---~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~ 382 (484)
|+|||++............. ........||+.|+|||++ .+..++.++|||||||++|||++|+.||.....
T Consensus 179 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~ 258 (337)
T 3ll6_A 179 LCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAK 258 (337)
T ss_dssp BCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-----
T ss_pred EecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhH
Confidence 99999998765432111000 0111234589999999998 566789999999999999999999999965311
Q ss_pred CCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 383 GNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
.. +.+....... ...+...+.+++..||+.||++|||+.|+++.
T Consensus 259 ~~-----------------~~~~~~~~~~-------------------~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 302 (337)
T 3ll6_A 259 LR-----------------IVNGKYSIPP-------------------HDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQ 302 (337)
T ss_dssp ------------------------CCCCT-------------------TCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred HH-----------------hhcCcccCCc-------------------ccccchHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 10 0000000000 01113347789999999999999999999999
Q ss_pred HHHHHHHH
Q 011508 463 LLSFRNKL 470 (484)
Q Consensus 463 L~~i~~~~ 470 (484)
|+.+....
T Consensus 303 l~~~~~~~ 310 (337)
T 3ll6_A 303 LQEIAAAR 310 (337)
T ss_dssp HHHHHHHT
T ss_pred HHHHHhcc
Confidence 99998764
No 148
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=5.7e-43 Score=329.56 Aligned_cols=254 Identities=30% Similarity=0.393 Sum_probs=197.7
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
.++|++.+.||+|+||.||+|... ++.||+|+++... ..+.+.+|++++++++||||+++++++. ..+..
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~----~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~----~~~~~ 89 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR----GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIV----EEKGG 89 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET----TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEEC----CC--C
T ss_pred hhhceEEeEEecCCCceEEEEEEc----CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEE----cCCCc
Confidence 467899999999999999999854 6789999987543 4577899999999999999999999863 33446
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
.++||||+++++|.+++.... ...+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||++
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~ 164 (278)
T 1byg_A 90 LYIVTEYMAKGSLVDYLRSRG--RSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLT 164 (278)
T ss_dssp CEEEECCCTTEEHHHHHHHHH--HHHCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC-
T ss_pred eEEEEecCCCCCHHHHHHhcc--cccCCHHHHHHHHHHHHHHHHHHH---hCCccccCCCcceEEEeCCCcEEEeecccc
Confidence 899999999999999997532 123788999999999999999999 899999999999999999999999999998
Q ss_pred cccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhhcc
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEALP 396 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 396 (484)
....... ....++..|+|||.+.+..++.++||||||+++|||+| |+.||...... .....
T Consensus 165 ~~~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~-----~~~~~--- 226 (278)
T 1byg_A 165 KEASSTQ----------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK-----DVVPR--- 226 (278)
T ss_dssp ---------------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG-----GHHHH---
T ss_pred ccccccc----------cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHH---
Confidence 7553221 12347889999999988889999999999999999998 99999753211 11110
Q ss_pred hhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHHH
Q 011508 397 ERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRNK 469 (484)
Q Consensus 397 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~ 469 (484)
+..-.... .+..++..+.+++..||+.||++|||+.|+++.|+.++..
T Consensus 227 --~~~~~~~~-----------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~ 274 (278)
T 1byg_A 227 --VEKGYKMD-----------------------APDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH 274 (278)
T ss_dssp --HTTTCCCC-----------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --HhcCCCCC-----------------------CcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhh
Confidence 00000000 0122356789999999999999999999999999999764
No 149
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=3.1e-42 Score=334.52 Aligned_cols=276 Identities=23% Similarity=0.321 Sum_probs=208.1
Q ss_pred hcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHc--CCCCCceeEeeeeeeeccCC
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRS--IRHRNLVKIITSCVSVDFQG 234 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~~~~~~~~~~~~~ 234 (484)
..++|.+.+.||+|+||.||+|+.. ++.||||++... ....+.+|.+++.. ++||||+++++++.... ..
T Consensus 40 ~~~~y~~~~~lg~G~~g~Vy~~~~~----~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~-~~ 111 (342)
T 1b6c_B 40 IARTIVLQESIGKGRFGEVWRGKWR----GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDN-GT 111 (342)
T ss_dssp HHHHCEEEEEEEEETTEEEEEEEET----TEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCC-SS
T ss_pred ccccEEEEeeecCCCCcEEEEEEEc----CccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccC-Cc
Confidence 3467999999999999999999863 678999998643 34667889998887 79999999999865332 11
Q ss_pred CceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-----CCCCeeecCCCCCCeeecCCCce
Q 011508 235 NDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHY-----CETPIVHCDLKPSNVLLDGELTA 309 (484)
Q Consensus 235 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-----~~~~ivH~dlk~~NIll~~~~~~ 309 (484)
....++||||+++|+|.+++... .+++..++.++.|++.||+|||.. ++.+|+||||||+||+++.++.+
T Consensus 112 ~~~~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~ 186 (342)
T 1b6c_B 112 WTQLWLVSDYHEHGSLFDYLNRY-----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTC 186 (342)
T ss_dssp CCCEEEEECCCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCE
T ss_pred cceeEEEEeecCCCcHHHHHhcc-----CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCE
Confidence 23689999999999999999743 489999999999999999999932 14689999999999999999999
Q ss_pred EEcccCcccccccccccCCCCccccccccccccccCccccCCC------CCCcccceehhhHHHHHHHhC----------
Q 011508 310 HVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGS------EVSTSGDVYSFGILLLEMFTG---------- 373 (484)
Q Consensus 310 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~------~~~~~~Dvws~Gvvl~elltg---------- 373 (484)
||+|||++.......... ........||..|+|||++.+. .++.++|||||||++|||+||
T Consensus 187 kL~Dfg~~~~~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~ 263 (342)
T 1b6c_B 187 CIADLGLAVRHDSATDTI---DIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDY 263 (342)
T ss_dssp EECCCTTCEEEETTTTEE---EECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCC
T ss_pred EEEECCCceecccccccc---ccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCccccc
Confidence 999999997664322110 0012334699999999998765 344789999999999999999
Q ss_pred CCCCCCCccCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCC
Q 011508 374 KGPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRER 453 (484)
Q Consensus 374 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R 453 (484)
+.||............+....... ...+.+.. .....++...+.+++.+||+.||++|
T Consensus 264 ~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~------------------~~~~~~~~~~l~~li~~cl~~dp~~R 321 (342)
T 1b6c_B 264 QLPYYDLVPSDPSVEEMRKVVCEQ----KLRPNIPN------------------RWQSCEALRVMAKIMRECWYANGAAR 321 (342)
T ss_dssp CCTTTTTSCSSCCHHHHHHHHTTS----CCCCCCCG------------------GGGTSHHHHHHHHHHHHHCCSSGGGS
T ss_pred ccCccccCcCcccHHHHHHHHHHH----HhCCCCcc------------------cccchhHHHHHHHHHHHHhccChhhC
Confidence 677765433333332222211110 01111100 01123557889999999999999999
Q ss_pred CCHHHHHHHHHHHHHHH
Q 011508 454 MNMEEVAAQLLSFRNKL 470 (484)
Q Consensus 454 Pt~~evl~~L~~i~~~~ 470 (484)
||+.||++.|+.+.++.
T Consensus 322 ps~~~i~~~L~~i~~~~ 338 (342)
T 1b6c_B 322 LTALRIKKTLSQLSQQE 338 (342)
T ss_dssp CCHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHHh
Confidence 99999999999997653
No 150
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.4e-43 Score=345.93 Aligned_cols=265 Identities=21% Similarity=0.267 Sum_probs=203.9
Q ss_pred ccHHhHHHhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcCCCCCceeEee
Q 011508 149 VSYQNLFKATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSIRHRNLVKIIT 225 (484)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~ 225 (484)
+...+.....++|++.+.||+|+||.||+|+.. .+++.||+|+++... ....+.+.+|..++..++||||+++++
T Consensus 51 ~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~--~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~ 128 (412)
T 2vd5_A 51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMK--QTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHF 128 (412)
T ss_dssp HHHHHHSCCGGGEEEEEEEEECSSCEEEEEEET--TTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEE
T ss_pred hhhhhccCChhhEEEEEEEeeCCCeEEEEEEEC--CCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEE
Confidence 344555566789999999999999999999954 467899999997532 223345889999999999999999999
Q ss_pred eeeeeccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecC
Q 011508 226 SCVSVDFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDG 305 (484)
Q Consensus 226 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~ 305 (484)
++ .+....++||||+++|+|.+++.... ..+++..+..++.||+.||+||| +++|+||||||+|||++.
T Consensus 129 ~~-----~~~~~~~lVmE~~~gg~L~~~l~~~~---~~l~~~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILld~ 197 (412)
T 2vd5_A 129 AF-----QDENYLYLVMEYYVGGDLLTLLSKFG---ERIPAEMARFYLAEIVMAIDSVH---RLGYVHRDIKPDNILLDR 197 (412)
T ss_dssp EE-----ECSSEEEEEECCCCSCBHHHHHHHHS---SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECT
T ss_pred EE-----eeCCEEEEEEcCCCCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccCHHHeeecC
Confidence 85 44558999999999999999997542 35899999999999999999999 899999999999999999
Q ss_pred CCceEEcccCcccccccccccCCCCccccccccccccccCccccC-------CCCCCcccceehhhHHHHHHHhCCCCCC
Q 011508 306 ELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGM-------GSEVSTSGDVYSFGILLLEMFTGKGPTN 378 (484)
Q Consensus 306 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~-------~~~~~~~~Dvws~Gvvl~elltg~~p~~ 378 (484)
++.+||+|||+++...... .......+||+.|+|||++. ...++.++|||||||++|||++|+.||.
T Consensus 198 ~g~vkL~DFGla~~~~~~~------~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~ 271 (412)
T 2vd5_A 198 CGHIRLADFGSCLKLRADG------TVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFY 271 (412)
T ss_dssp TSCEEECCCTTCEECCTTS------CEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTC
T ss_pred CCCEEEeechhheeccCCC------ccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCC
Confidence 9999999999998764321 11122357999999999886 4578999999999999999999999997
Q ss_pred CCccCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCC---CC
Q 011508 379 EMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRER---MN 455 (484)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R---Pt 455 (484)
..... +......... ....-+.. ...++.++.+++.+||. +|++| |+
T Consensus 272 ~~~~~-----~~~~~i~~~~-~~~~~p~~-----------------------~~~~s~~~~dli~~lL~-~p~~Rlgr~~ 321 (412)
T 2vd5_A 272 ADSTA-----ETYGKIVHYK-EHLSLPLV-----------------------DEGVPEEARDFIQRLLC-PPETRLGRGG 321 (412)
T ss_dssp CSSHH-----HHHHHHHTHH-HHCCCC---------------------------CCCHHHHHHHHTTSS-CGGGCTTTTT
T ss_pred CCCHH-----HHHHHHHhcc-cCcCCCcc-----------------------ccCCCHHHHHHHHHHcC-ChhhcCCCCC
Confidence 53211 1111110000 00000000 11225678999999999 99998 58
Q ss_pred HHHHHHH
Q 011508 456 MEEVAAQ 462 (484)
Q Consensus 456 ~~evl~~ 462 (484)
++|+++.
T Consensus 322 ~~ei~~H 328 (412)
T 2vd5_A 322 AGDFRTH 328 (412)
T ss_dssp HHHHHTS
T ss_pred HHHHhcC
Confidence 9888653
No 151
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.5e-42 Score=326.73 Aligned_cols=249 Identities=22% Similarity=0.355 Sum_probs=179.9
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
++|.+.+.||+|+||.||+|+.. .+++.||+|++.... ....+.+.+|+.++++++||||+++++++. ..
T Consensus 11 ~~y~~~~~lg~G~~g~Vy~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~ 83 (278)
T 3cok_A 11 EDFKVGNLLGKGSFAGVYRAESI--HTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFE-----DS 83 (278)
T ss_dssp GGEEEEEEEEECSSEEEEEEEET--TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEE-----CS
T ss_pred ccceeeeeecCCCceEEEEEEEc--cCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEc-----cC
Confidence 57899999999999999999843 357889999997432 223467899999999999999999999853 44
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
...++||||+++++|.+++... ...+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||
T Consensus 84 ~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg 157 (278)
T 3cok_A 84 NYVYLVLEMCHNGEMNRYLKNR---VKPFSENEARHFMHQIITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFG 157 (278)
T ss_dssp SEEEEEEECCTTEEHHHHHHTC---SSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSSCCGGGEEECTTCCEEECCCT
T ss_pred CeEEEEEecCCCCcHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEEeec
Confidence 5889999999999999999743 245899999999999999999999 8899999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhc
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEAL 395 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 395 (484)
.+....... .......|++.|+|||.+.+..++.++||||||+++|||++|+.||........
T Consensus 158 ~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~---------- 220 (278)
T 3cok_A 158 LATQLKMPH-------EKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT---------- 220 (278)
T ss_dssp TCEECC-----------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC------------
T ss_pred ceeeccCCC-------CcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH----------
Confidence 998653221 111234689999999999988899999999999999999999999975321110
Q ss_pred chhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 396 PERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 396 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
...+....... +..++.++.+++.+||+.||++|||++|+++
T Consensus 221 ---~~~~~~~~~~~---------------------~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 221 ---LNKVVLADYEM---------------------PSFLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp ------CCSSCCCC---------------------CTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ---HHHHhhcccCC---------------------ccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 00000000000 1122557889999999999999999999986
No 152
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=6.3e-43 Score=336.49 Aligned_cols=249 Identities=24% Similarity=0.294 Sum_probs=176.7
Q ss_pred cCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCC-CCCceeEeeeeeeeccCCCceeeEEe
Q 011508 164 ENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIR-HRNLVKIITSCVSVDFQGNDFEALVY 242 (484)
Q Consensus 164 ~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~lv~ 242 (484)
.+.||+|+||.||+|+.. .+++.||||++... ....+.+|+.+++.+. ||||+++++++. ++...++||
T Consensus 16 ~~~lG~G~~g~V~~~~~~--~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~-----~~~~~~lv~ 85 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHK--KSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFH-----DQLHTFLVM 85 (325)
T ss_dssp SCCSEEETTEEEEEEEET--TTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEE-----CSSEEEEEE
T ss_pred CCccccCCCeEEEEEEEC--CCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEE-----cCCEEEEEE
Confidence 478999999999999954 45789999999643 3467789999999996 999999999953 455889999
Q ss_pred ecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCC---ceEEcccCcccc
Q 011508 243 ELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGEL---TAHVSDFGLAKF 319 (484)
Q Consensus 243 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~---~~kl~Dfg~a~~ 319 (484)
||+++|+|.+++... ..+++.+++.++.|++.||+||| +++|+||||||+||+++.++ .+||+|||+++.
T Consensus 86 e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~ 158 (325)
T 3kn6_A 86 ELLNGGELFERIKKK----KHFSETEASYIMRKLVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARL 158 (325)
T ss_dssp CCCCSCBHHHHHHHC----SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEC----CEEEECCCTTCEE
T ss_pred EccCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCCeecCCCHHHEEEecCCCcccEEEecccccee
Confidence 999999999999753 35899999999999999999999 89999999999999997765 899999999986
Q ss_pred cccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCC--ccHhHHHHhhcch
Q 011508 320 LPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGN--LTLHNFVKEALPE 397 (484)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~--~~~~~~~~~~~~~ 397 (484)
..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ....+..
T Consensus 159 ~~~~~-------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~------ 225 (325)
T 3kn6_A 159 KPPDN-------QPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIM------ 225 (325)
T ss_dssp CCC-----------------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHH------
T ss_pred cCCCC-------CcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHH------
Confidence 54322 11223468999999999999999999999999999999999999997643211 1111111
Q ss_pred hhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 398 RLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 398 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
..+......... .....++.++.+++..||+.||++|||++|+++
T Consensus 226 --~~i~~~~~~~~~-----------------~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 226 --KKIKKGDFSFEG-----------------EAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp --HHHTTTCCCCCS-----------------HHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred --HHHHcCCCCCCc-----------------ccccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 111111110000 001233667899999999999999999999874
No 153
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=4.7e-43 Score=342.56 Aligned_cols=251 Identities=28% Similarity=0.318 Sum_probs=190.7
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc---cchHHHHHHHHH-HHcCCCCCceeEeeeeeeeccC
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR---GASKSFIAECQA-LRSIRHRNLVKIITSCVSVDFQ 233 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~e~~~-l~~l~h~niv~~~~~~~~~~~~ 233 (484)
.++|++.+.||+|+||.||+|+.. .++..||+|+++.... .....+.+|..+ ++.++||||+++++++ .
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~--~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~-----~ 109 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHK--AEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSF-----Q 109 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEET--TTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEE-----E
T ss_pred hhheEEEEEEeeCCCeEEEEEEEc--CCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEE-----E
Confidence 357899999999999999999954 4678999999976432 223456677776 5678999999999985 4
Q ss_pred CCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcc
Q 011508 234 GNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSD 313 (484)
Q Consensus 234 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~D 313 (484)
..+..++||||+++|+|.+++.... .+++..++.++.||+.||+||| +++|+||||||+|||++.++.+||+|
T Consensus 110 ~~~~~~lv~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~ikL~D 182 (373)
T 2r5t_A 110 TADKLYFVLDYINGGELFYHLQRER----CFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTD 182 (373)
T ss_dssp CSSEEEEEEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECC
T ss_pred eCCEEEEEEeCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEee
Confidence 4558999999999999999997543 4889999999999999999999 89999999999999999999999999
Q ss_pred cCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHh
Q 011508 314 FGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKE 393 (484)
Q Consensus 314 fg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 393 (484)
||+++..... .......+||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......
T Consensus 183 FG~a~~~~~~-------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~-----~~~~~~ 250 (373)
T 2r5t_A 183 FGLCKENIEH-------NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT-----AEMYDN 250 (373)
T ss_dssp CCBCGGGBCC-------CCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBH-----HHHHHH
T ss_pred CccccccccC-------CCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH-----HHHHHH
Confidence 9999854221 1122345799999999999999999999999999999999999999975321 111111
Q ss_pred hcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHH
Q 011508 394 ALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQL 463 (484)
Q Consensus 394 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 463 (484)
++...+.. +..+...+.+++.+||+.||++||++.+.++.+
T Consensus 251 --------i~~~~~~~---------------------~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i 291 (373)
T 2r5t_A 251 --------ILNKPLQL---------------------KPNITNSARHLLEGLLQKDRTKRLGAKDDFMEI 291 (373)
T ss_dssp --------HHHSCCCC---------------------CSSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHH
T ss_pred --------HHhcccCC---------------------CCCCCHHHHHHHHHHcccCHHhCCCCCCCHHHH
Confidence 11111100 111245688999999999999999986544433
No 154
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=4.7e-42 Score=324.35 Aligned_cols=253 Identities=21% Similarity=0.321 Sum_probs=200.1
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
.++|++.+.||+|+||.||+|... .++..||+|++..... ...+.+.+|+.++++++||||+++++++. ..
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~ 77 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHK--TTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQ-----EE 77 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEET--TTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-----CS
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEc--CCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEE-----cC
Confidence 578999999999999999999844 4578899999975432 23467889999999999999999999853 44
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCc---eEEc
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELT---AHVS 312 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~---~kl~ 312 (484)
...++||||+++++|.+++... ..+++..++.++.|++.||+||| +.+|+||||||+||+++.++. +||+
T Consensus 78 ~~~~~v~e~~~~~~l~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~~~kl~ 150 (284)
T 3kk8_A 78 SFHYLVFDLVTGGELFEDIVAR----EFYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLA 150 (284)
T ss_dssp SEEEEEECCCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSTTCCEEEC
T ss_pred CEEEEEEecCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCcCcCCCCHHHEEEecCCCCCcEEEe
Confidence 5789999999999999988754 34899999999999999999999 899999999999999987655 9999
Q ss_pred ccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHH
Q 011508 313 DFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVK 392 (484)
Q Consensus 313 Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 392 (484)
|||.+....... ......||+.|+|||.+.+..++.++||||||+++|+|++|+.||...... ....
T Consensus 151 Dfg~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-----~~~~ 217 (284)
T 3kk8_A 151 DFGLAIEVNDSE--------AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH-----RLYA 217 (284)
T ss_dssp CCTTCEECCSSC--------BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHH
T ss_pred eceeeEEcccCc--------cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh-----HHHH
Confidence 999997653321 122356899999999999999999999999999999999999999653211 1111
Q ss_pred hhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 393 EALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 393 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
... ........+. ...++.++.+++..||+.||++|||+.|+++.
T Consensus 218 ~~~-~~~~~~~~~~------------------------~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 218 QIK-AGAYDYPSPE------------------------WDTVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp HHH-HTCCCCCTTT------------------------TTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred HHH-hccccCCchh------------------------hcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 000 0000000000 11225678899999999999999999999874
No 155
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=1.7e-42 Score=325.92 Aligned_cols=253 Identities=23% Similarity=0.321 Sum_probs=200.7
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
++|++.+.||+|+||.||+|+.. .+++.||+|++..... ...+.+.+|+.+++.++||||+++++++.. +..
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~ 79 (276)
T 2yex_A 7 EDWDLVQTLGEGAYGEVQLAVNR--VTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE-----GNI 79 (276)
T ss_dssp HHEEEEEEEEECSSSEEEEEEET--TTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-----TTE
T ss_pred cceEEEEEeecCCCcEEEEEEEC--CCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEc-----CCE
Confidence 56889999999999999999854 4578899999975432 344678999999999999999999998643 457
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
.++||||+++++|.+++.. ...+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||.+
T Consensus 80 ~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~ 152 (276)
T 2yex_A 80 QYLFLEYCSGGELFDRIEP----DIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLA 152 (276)
T ss_dssp EEEEEECCTTEEGGGGSBT----TTBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEEecCCCcHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCChHHEEEccCCCEEEeeCCCc
Confidence 8999999999999998863 235899999999999999999999 899999999999999999999999999999
Q ss_pred cccccccccCCCCccccccccccccccCccccCCCCC-CcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcc
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEV-STSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALP 396 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 396 (484)
........ ........|+..|+|||.+.+..+ +.++||||||+++|||++|+.||............+.....
T Consensus 153 ~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~- 226 (276)
T 2yex_A 153 TVFRYNNR-----ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT- 226 (276)
T ss_dssp EECEETTE-----ECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCT-
T ss_pred cccCCCcc-----hhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhccc-
Confidence 86543211 111223568999999999887665 78999999999999999999999764333222222211100
Q ss_pred hhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 397 ERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 397 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
... ....++..+.+++..||+.||++|||++|+++
T Consensus 227 -----~~~-------------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 227 -----YLN-------------------------PWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp -----TST-------------------------TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -----ccC-------------------------chhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 000 01122557889999999999999999999976
No 156
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1.5e-42 Score=334.22 Aligned_cols=251 Identities=23% Similarity=0.274 Sum_probs=190.9
Q ss_pred cCCCCccCccccccceeEEEEEEcC-CCCeeEEEEEEeeccC----ccchHHHHHHHHHHHcCCCCCceeEeeeeeeecc
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDH-DDHETLVAVKVLNLQH----RGASKSFIAECQALRSIRHRNLVKIITSCVSVDF 232 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 232 (484)
.++|++.+.||+|+||.||+|+... ..+++.||+|+++... ......+.+|+.++++++||||+++++++.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~---- 91 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQ---- 91 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEE----
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEE----
Confidence 3678999999999999999998632 2467899999997542 223356788999999999999999999853
Q ss_pred CCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEc
Q 011508 233 QGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVS 312 (484)
Q Consensus 233 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~ 312 (484)
.++..++||||+++++|.+++.... .+++..++.++.||+.||+||| +++|+||||||+||+++.++.+||+
T Consensus 92 -~~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~ 163 (327)
T 3a62_A 92 -TGGKLYLILEYLSGGELFMQLEREG----IFMEDTACFYLAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLT 163 (327)
T ss_dssp -CSSCEEEEEECCTTEEHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTSCEEEC
T ss_pred -cCCEEEEEEeCCCCCcHHHHHHhCC----CCCHHHHHHHHHHHHHHHHHHH---hCCEEcccCCHHHeEECCCCcEEEE
Confidence 4458899999999999999997543 4889999999999999999999 8899999999999999999999999
Q ss_pred ccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHH
Q 011508 313 DFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVK 392 (484)
Q Consensus 313 Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 392 (484)
|||+++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... .....
T Consensus 164 Dfg~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----~~~~~ 231 (327)
T 3a62_A 164 DFGLCKESIHDG-------TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENR-----KKTID 231 (327)
T ss_dssp CCSCC-----------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHHH
T ss_pred eCCcccccccCC-------ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCH-----HHHHH
Confidence 999987543221 112235689999999999998999999999999999999999999975321 11111
Q ss_pred hhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCC-----CHHHHHH
Q 011508 393 EALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERM-----NMEEVAA 461 (484)
Q Consensus 393 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~ 461 (484)
. +....... +..+..++.+++.+||+.||++|| ++.|+++
T Consensus 232 ~--------i~~~~~~~---------------------p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 232 K--------ILKCKLNL---------------------PPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp H--------HHHTCCCC---------------------CTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred H--------HHhCCCCC---------------------CCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 1 11000000 112255788999999999999999 7778765
No 157
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=1.6e-42 Score=326.70 Aligned_cols=249 Identities=22% Similarity=0.335 Sum_probs=198.1
Q ss_pred hcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccC
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQ 233 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 233 (484)
+.++|++.+.||+|+||.||+|... .++..||+|++.... ......+.+|+.++++++||||+++++++.
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----- 79 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREK--QSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH----- 79 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEET--TTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEE-----
T ss_pred ecccEEEeeEEecCCCeEEEEEEEc--cCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEe-----
Confidence 3467899999999999999999844 457789999986432 223467889999999999999999999953
Q ss_pred CCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcc
Q 011508 234 GNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSD 313 (484)
Q Consensus 234 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~D 313 (484)
.....++||||+++++|.+++.... .+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|
T Consensus 80 ~~~~~~lv~e~~~~~~l~~~l~~~~----~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~D 152 (279)
T 3fdn_A 80 DATRVYLILEYAPLGTVYRELQKLS----KFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIAD 152 (279)
T ss_dssp CSSEEEEEECCCTTEEHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---TTTCEECCCCGGGEEECTTSCEEECS
T ss_pred cCCEEEEEEecCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHhEEEcCCCCEEEEe
Confidence 4457899999999999999997543 4899999999999999999999 89999999999999999999999999
Q ss_pred cCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHh
Q 011508 314 FGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKE 393 (484)
Q Consensus 314 fg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 393 (484)
||++...... ......|+..|+|||.+.+..++.++||||||+++|+|++|+.||..... ......
T Consensus 153 fg~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~ 218 (279)
T 3fdn_A 153 FGWSVHAPSS---------RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY-----QETYKR 218 (279)
T ss_dssp CCEESCC-----------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHHHH
T ss_pred ccccccCCcc---------cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcH-----HHHHHH
Confidence 9988654322 11234689999999999999999999999999999999999999975311 111110
Q ss_pred hcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 394 ALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 394 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
. ... .... +..++..+.+++.+||+.||++|||++|+++.
T Consensus 219 ~-----~~~-~~~~-----------------------~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 219 I-----SRV-EFTF-----------------------PDFVTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp H-----HHT-CCCC-----------------------CTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred H-----HhC-CCCC-----------------------CCcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0 000 0000 11125568899999999999999999999975
No 158
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=4.3e-42 Score=345.88 Aligned_cols=272 Identities=22% Similarity=0.320 Sum_probs=207.5
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
.++|.+.+.||+|+||.||+|+.. .+++.||||++..... ...+.+|+++++.++|++.+..+.++. .....
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~--~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~----~~~~~ 77 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNI--QTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFG----VEGDY 77 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEET--TTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEE----EETTE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEEC--CCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEE----eeCCE
Confidence 468999999999999999999843 4578899998875433 245889999999998866555554442 23457
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeee---cCCCceEEccc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLL---DGELTAHVSDF 314 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll---~~~~~~kl~Df 314 (484)
.++||||+ +++|.+++.... ..+++..++.|+.||+.||+||| +++|+||||||+|||+ +.++.+||+||
T Consensus 78 ~~lvme~~-g~sL~~ll~~~~---~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDIKP~NILl~~~~~~~~vkL~DF 150 (483)
T 3sv0_A 78 NVLVMDLL-GPSLEDLFNFCS---RKLSLKTVLMLADQMINRVEFVH---SKSFLHRDIKPDNFLMGLGRRANQVYIIDF 150 (483)
T ss_dssp EEEEEECC-CCBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTTCEEECCC
T ss_pred EEEEEECC-CCCHHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCcceEEEecCCCCCeEEEEeC
Confidence 89999999 999999997432 35999999999999999999999 8999999999999999 68899999999
Q ss_pred CcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhh
Q 011508 315 GLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEA 394 (484)
Q Consensus 315 g~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 394 (484)
|+++.+..................||..|+|||++.+..++.++|||||||++|||++|+.||........ ...+...
T Consensus 151 Gla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~--~~~~~~i 228 (483)
T 3sv0_A 151 GLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTK--KQKYEKI 228 (483)
T ss_dssp TTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSH--HHHHHHH
T ss_pred CcceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhH--HHHHHHH
Confidence 99987754332211111222356799999999999999999999999999999999999999986433211 1111111
Q ss_pred cchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHHHH
Q 011508 395 LPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRNKL 470 (484)
Q Consensus 395 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~ 470 (484)
........+.. ....++.++.+++..||+.||++||++.+|++.|+.+....
T Consensus 229 ~~~~~~~~~~~------------------------l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~ 280 (483)
T 3sv0_A 229 SEKKVATSIEA------------------------LCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIRE 280 (483)
T ss_dssp HHHHHHSCHHH------------------------HHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred hhccccccHHH------------------------HhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHc
Confidence 11111000000 01223567899999999999999999999999999986643
No 159
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.1e-42 Score=343.56 Aligned_cols=210 Identities=25% Similarity=0.386 Sum_probs=162.8
Q ss_pred hcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC--ccchHHHHHHHHHHHcCC-CCCceeEeeeeeeeccC
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH--RGASKSFIAECQALRSIR-HRNLVKIITSCVSVDFQ 233 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~ 233 (484)
..++|++.+.||+|+||.||+|.. ..+++.||||++.... ......+.+|+.++.++. ||||+++++++.. .
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~--~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~---~ 81 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSID--RRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRA---D 81 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEE--TTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC---T
T ss_pred ccCceEEEEEeeeCCCeEEEEEEE--CCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEec---C
Confidence 347899999999999999999984 4467899999986432 233467889999999997 9999999998643 2
Q ss_pred CCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcc
Q 011508 234 GNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSD 313 (484)
Q Consensus 234 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~D 313 (484)
+....++||||++ ++|.+++... .+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|
T Consensus 82 ~~~~~~lv~e~~~-~~L~~~~~~~-----~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~D 152 (388)
T 3oz6_A 82 NDRDVYLVFDYME-TDLHAVIRAN-----ILEPVHKQYVVYQLIKVIKYLH---SGGLLHRDMKPSNILLNAECHVKVAD 152 (388)
T ss_dssp TSSCEEEEEECCS-EEHHHHHHHT-----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECC
T ss_pred CCCEEEEEecccC-cCHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHeEEcCCCCEEecC
Confidence 3457899999996 6999998742 4889999999999999999999 89999999999999999999999999
Q ss_pred cCcccccccccccC--------------CCCccccccccccccccCccccCC-CCCCcccceehhhHHHHHHHhCCCCCC
Q 011508 314 FGLAKFLPEAANNL--------------SSNQSSSVGVKGTVGYAAPEYGMG-SEVSTSGDVYSFGILLLEMFTGKGPTN 378 (484)
Q Consensus 314 fg~a~~~~~~~~~~--------------~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~ 378 (484)
||+++.+....... ...........||+.|+|||++.+ ..++.++||||+||++|||++|+.||.
T Consensus 153 FG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~ 232 (388)
T 3oz6_A 153 FGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFP 232 (388)
T ss_dssp CTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred CcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCC
Confidence 99998764311100 011122334679999999998876 678999999999999999999999997
Q ss_pred CC
Q 011508 379 EM 380 (484)
Q Consensus 379 ~~ 380 (484)
+.
T Consensus 233 ~~ 234 (388)
T 3oz6_A 233 GS 234 (388)
T ss_dssp CS
T ss_pred CC
Confidence 64
No 160
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=1.4e-42 Score=334.12 Aligned_cols=271 Identities=23% Similarity=0.366 Sum_probs=210.4
Q ss_pred HhHHHhcCCCCccCccccccceeEEEEEEcC---CCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeee
Q 011508 152 QNLFKATDGFSLENLIGAGSFGSVYKGIFDH---DDHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSC 227 (484)
Q Consensus 152 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~---~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~ 227 (484)
+++....++|++.+.||+|+||.||+|+... ...+..||+|++..... .....+.+|+.++++++||||+++++++
T Consensus 18 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 97 (322)
T 1p4o_A 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 97 (322)
T ss_dssp CTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEE
T ss_pred hhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEE
Confidence 3444566789999999999999999998642 23467899999975433 2335688999999999999999999985
Q ss_pred eeeccCCCceeeEEeecccCCCHHHHHhhcC------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCe
Q 011508 228 VSVDFQGNDFEALVYELMVNGSLEEWLHLNR------DAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNV 301 (484)
Q Consensus 228 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NI 301 (484)
..+...++||||+++|+|.+++.... .....+++..++.++.|++.||+||| +++|+||||||+||
T Consensus 98 -----~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~NI 169 (322)
T 1p4o_A 98 -----SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNC 169 (322)
T ss_dssp -----CSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCSGGGE
T ss_pred -----ccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCCccCCCccceE
Confidence 34557899999999999999997532 11235789999999999999999999 88999999999999
Q ss_pred eecCCCceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCC
Q 011508 302 LLDGELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEM 380 (484)
Q Consensus 302 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~ 380 (484)
+++.++.+||+|||++........ ........+++.|+|||++.+..++.++||||||+++|||++ |+.||...
T Consensus 170 li~~~~~~kl~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~ 244 (322)
T 1p4o_A 170 MVAEDFTVKIGDFGMTRDIYETDY-----YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL 244 (322)
T ss_dssp EECTTCCEEECCTTCCCGGGGGGC-----EEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS
T ss_pred EEcCCCeEEECcCccccccccccc-----cccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccC
Confidence 999999999999999986543221 111223457889999999988889999999999999999999 89998653
Q ss_pred ccCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHH
Q 011508 381 FTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVA 460 (484)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl 460 (484)
.. ...... +....... .+..++..+.+++..||+.||++|||+.|++
T Consensus 245 ~~-----~~~~~~--------~~~~~~~~--------------------~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l 291 (322)
T 1p4o_A 245 SN-----EQVLRF--------VMEGGLLD--------------------KPDNCPDMLFELMRMCWQYNPKMRPSFLEII 291 (322)
T ss_dssp CH-----HHHHHH--------HHTTCCCC--------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred CH-----HHHHHH--------HHcCCcCC--------------------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHH
Confidence 21 111111 11100000 0122356789999999999999999999999
Q ss_pred HHHHHHHH
Q 011508 461 AQLLSFRN 468 (484)
Q Consensus 461 ~~L~~i~~ 468 (484)
+.|+++..
T Consensus 292 ~~L~~~~~ 299 (322)
T 1p4o_A 292 SSIKEEME 299 (322)
T ss_dssp HHHGGGSC
T ss_pred HHHHHhhc
Confidence 99987643
No 161
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=5.5e-43 Score=351.76 Aligned_cols=249 Identities=22% Similarity=0.280 Sum_probs=191.2
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeecc---CccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCC
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQ---HRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQG 234 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 234 (484)
.++|++.+.||+|+||.||+|+. ..+++.||||+++.. .......+.+|+.+++.++||||+++++++..
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~--~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~----- 219 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKE--KATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQT----- 219 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEE--TTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEE-----
T ss_pred hHHcEEeEEEeeCcCEEEEEEEE--cCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEee-----
Confidence 46799999999999999999984 446789999999753 22334567889999999999999999999643
Q ss_pred CceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC-CCeeecCCCCCCeeecCCCceEEcc
Q 011508 235 NDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCE-TPIVHCDLKPSNVLLDGELTAHVSD 313 (484)
Q Consensus 235 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~dlk~~NIll~~~~~~kl~D 313 (484)
.+..++||||+++|+|.+++.... .+++..+..++.||+.||+||| + ++|+||||||+|||++.++.+||+|
T Consensus 220 ~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH---~~~giiHrDlkp~NIll~~~~~~kl~D 292 (446)
T 4ejn_A 220 HDRLCFVMEYANGGELFFHLSRER----VFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITD 292 (446)
T ss_dssp TTEEEEEECCCSSCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCCCGGGEEECSSSCEEECC
T ss_pred CCEEEEEEeeCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHh---hcCCEEECCCCHHHEEECCCCCEEEcc
Confidence 447899999999999999997543 4899999999999999999999 6 8999999999999999999999999
Q ss_pred cCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHh
Q 011508 314 FGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKE 393 (484)
Q Consensus 314 fg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 393 (484)
||+++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......
T Consensus 293 FG~a~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-----~~~~~~ 360 (446)
T 4ejn_A 293 FGLCKEGIKDG-------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-----EKLFEL 360 (446)
T ss_dssp CCCCCTTCC------------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHH
T ss_pred CCCceeccCCC-------cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH-----HHHHHH
Confidence 99997543221 122345799999999999999999999999999999999999999965321 111111
Q ss_pred hcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCC-----CHHHHHH
Q 011508 394 ALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERM-----NMEEVAA 461 (484)
Q Consensus 394 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~ 461 (484)
.. ...... +..++.++.+++.+||+.||++|| |++|+++
T Consensus 361 i~--------~~~~~~---------------------p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 361 IL--------MEEIRF---------------------PRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp HH--------HCCCCC---------------------CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred HH--------hCCCCC---------------------CccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 00 000000 112255788999999999999999 9999986
No 162
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3.2e-42 Score=339.48 Aligned_cols=288 Identities=21% Similarity=0.228 Sum_probs=202.7
Q ss_pred HhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeecc---
Q 011508 156 KATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDF--- 232 (484)
Q Consensus 156 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~--- 232 (484)
...++|++.+.||+|+||.||+|+. ..+++.||+|++..... ...+|+++++.++||||+++++++.....
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~--~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 77 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFD--IESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEP 77 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEE--TTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC-----
T ss_pred cccceEEEEEEEEeccCEEEEEEEE--CCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCcccc
Confidence 4567899999999999999999984 44678999999865432 23479999999999999999998755321
Q ss_pred ------------------------------CCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHH
Q 011508 233 ------------------------------QGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEY 282 (484)
Q Consensus 233 ------------------------------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~ 282 (484)
..+.+.++||||++ |+|.+.+.........+++..+..++.||+.||+|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~ 156 (383)
T 3eb0_A 78 KPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGF 156 (383)
T ss_dssp --------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 33456889999997 58888887544445679999999999999999999
Q ss_pred HHhcCCCCeeecCCCCCCeeec-CCCceEEcccCcccccccccccCCCCccccccccccccccCccccCCC-CCCcccce
Q 011508 283 LHHYCETPIVHCDLKPSNVLLD-GELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGS-EVSTSGDV 360 (484)
Q Consensus 283 LH~~~~~~ivH~dlk~~NIll~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv 360 (484)
|| +.+|+||||||+||+++ .++.+||+|||+++...... ......+|..|+|||++.+. .++.++||
T Consensus 157 LH---~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~--------~~~~~~~t~~y~aPE~~~~~~~~~~~~Di 225 (383)
T 3eb0_A 157 IH---SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE--------PSVAYICSRFYRAPELMLGATEYTPSIDL 225 (383)
T ss_dssp HH---TTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS--------CCCCCCCCSSCCCHHHHTTCSSCCTHHHH
T ss_pred HH---HCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC--------CCcCcccCCCccCHHHhcCCCCCCcchhh
Confidence 99 99999999999999998 68899999999998663322 12234689999999988764 58999999
Q ss_pred ehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchhhhhh--cCcccccccccccchhhhhhhccccccchhHHHHHH
Q 011508 361 YSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPERLAEI--VDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSV 438 (484)
Q Consensus 361 ws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 438 (484)
||+||++|||++|+.||...... ..+...+..........+ .++..... ..... .....+...+..++.++
T Consensus 226 wslG~il~ell~g~~pf~~~~~~-~~~~~i~~~~g~p~~~~~~~~~~~~~~~----~~~~~--~~~~~~~~~~~~~~~~~ 298 (383)
T 3eb0_A 226 WSIGCVFGELILGKPLFSGETSI-DQLVRIIQIMGTPTKEQMIRMNPHYTEV----RFPTL--KAKDWRKILPEGTPSLA 298 (383)
T ss_dssp HHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCHHHHHHHCTTC--C----CCCCC--CCCCHHHHSCTTCCHHH
T ss_pred hhHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCCHHHHHHhCcccccc----cCCcc--CcccHHhhCCCCCCHHH
Confidence 99999999999999999764221 112222211111100000 00000000 00000 00000000122346678
Q ss_pred HhHhhccCCCCcCCCCCHHHHHH--HHHHHHH
Q 011508 439 LGIGVICSSELPRERMNMEEVAA--QLLSFRN 468 (484)
Q Consensus 439 ~~l~~~cl~~dP~~RPt~~evl~--~L~~i~~ 468 (484)
.+++.+||+.||++|||+.|+++ .++.++.
T Consensus 299 ~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~ 330 (383)
T 3eb0_A 299 IDLLEQILRYEPDLRINPYEAMAHPFFDHLRN 330 (383)
T ss_dssp HHHHHHHCCSSGGGSCCHHHHHTSGGGHHHHH
T ss_pred HHHHHHHccCChhhCCCHHHHhcCHHHHHHHh
Confidence 99999999999999999999985 3455544
No 163
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=9e-43 Score=338.26 Aligned_cols=252 Identities=24% Similarity=0.383 Sum_probs=191.6
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCC--CCceeEeeeeeeeccC
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIRH--RNLVKIITSCVSVDFQ 233 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h--~niv~~~~~~~~~~~~ 233 (484)
.++|++.+.||+|+||.||+|... +++.||||++..... ...+.+.+|+.++.+++| +||+++++++.
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~----- 79 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNE---KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEI----- 79 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECT---TSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEE-----
T ss_pred cCEEEEEEEEecCCCeEEEEEEeC---CCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEe-----
Confidence 467999999999999999999853 478899999975533 233678899999999976 99999999854
Q ss_pred CCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcc
Q 011508 234 GNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSD 313 (484)
Q Consensus 234 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~D 313 (484)
.+...++|||+ .+++|.+++... ..+++.++..++.|++.||+||| +++|+||||||+|||++ ++.+||+|
T Consensus 80 ~~~~~~lv~e~-~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~al~~lH---~~~iiHrDikp~NIll~-~~~~kl~D 150 (343)
T 3dbq_A 80 TDQYIYMVMEC-GNIDLNSWLKKK----KSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLID 150 (343)
T ss_dssp CSSEEEEEECC-CSEEHHHHHHHS----CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEE-TTEEEECC
T ss_pred eCCEEEEEEeC-CCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEE-CCcEEEee
Confidence 34588999995 588999999853 35899999999999999999999 88999999999999997 57899999
Q ss_pred cCcccccccccccCCCCccccccccccccccCccccCC-----------CCCCcccceehhhHHHHHHHhCCCCCCCCcc
Q 011508 314 FGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-----------SEVSTSGDVYSFGILLLEMFTGKGPTNEMFT 382 (484)
Q Consensus 314 fg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-----------~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~ 382 (484)
||+++....... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||.....
T Consensus 151 FG~a~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~ 225 (343)
T 3dbq_A 151 FGIANQMQPDTT-----SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN 225 (343)
T ss_dssp CSSSCCC-----------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCS
T ss_pred cccccccCcccc-----cccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhh
Confidence 999987643221 111223569999999998754 6789999999999999999999999975322
Q ss_pred CCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 383 GNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
.... +..++++...... +..+...+.+++..||+.||++|||+.|+++.
T Consensus 226 ~~~~------------~~~~~~~~~~~~~-------------------~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 226 QISK------------LHAIIDPNHEIEF-------------------PDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp HHHH------------HHHHHCTTSCCCC-------------------CCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHH------------HHHHhcCCcccCC-------------------cccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 1100 1112221111100 11124568899999999999999999999864
No 164
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=1.5e-42 Score=339.64 Aligned_cols=261 Identities=15% Similarity=0.157 Sum_probs=203.8
Q ss_pred HhcCCCCccCccccccceeEEEEEEc---CCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCC---CCCceeEeeeeee
Q 011508 156 KATDGFSLENLIGAGSFGSVYKGIFD---HDDHETLVAVKVLNLQHRGASKSFIAECQALRSIR---HRNLVKIITSCVS 229 (484)
Q Consensus 156 ~~~~~~~~~~~lg~G~~g~Vy~~~~~---~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~ 229 (484)
...++|.+.+.||+|+||.||+|++. +..+++.||+|+++.. ....+..|++++.+++ |+||+++++++..
T Consensus 62 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~ 138 (365)
T 3e7e_A 62 LGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLF 138 (365)
T ss_dssp CSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC
T ss_pred ECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeec
Confidence 34577999999999999999999532 3345788999998754 3457788888888886 9999999998643
Q ss_pred eccCCCceeeEEeecccCCCHHHHHhhcCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecC---
Q 011508 230 VDFQGNDFEALVYELMVNGSLEEWLHLNRD-APRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDG--- 305 (484)
Q Consensus 230 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~--- 305 (484)
++..++||||+++|+|.+++..... ....+++..++.++.||+.||+||| +++|+||||||+|||++.
T Consensus 139 -----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH---~~~ivHrDiKp~NIll~~~~~ 210 (365)
T 3e7e_A 139 -----QNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVH---DCEIIHGDIKPDNFILGNGFL 210 (365)
T ss_dssp -----SSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECGGGT
T ss_pred -----CCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEeccccc
Confidence 4478999999999999999975432 2456999999999999999999999 899999999999999998
Q ss_pred --------CCceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCC
Q 011508 306 --------ELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPT 377 (484)
Q Consensus 306 --------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~ 377 (484)
++.+||+|||+++.+.... .........||..|+|||++.+..++.++|||||||++|||+||+.||
T Consensus 211 ~~~~~~~~~~~~kl~DFG~a~~~~~~~-----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf 285 (365)
T 3e7e_A 211 EQDDEDDLSAGLALIDLGQSIDMKLFP-----KGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMK 285 (365)
T ss_dssp CC------CTTEEECCCTTCEEGGGSC-----TTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCC
T ss_pred CccccccccCCEEEeeCchhhhhhccC-----CCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCcc
Confidence 8999999999997653221 112233457999999999999999999999999999999999999998
Q ss_pred CCCccCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCC-CCH
Q 011508 378 NEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRER-MNM 456 (484)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R-Pt~ 456 (484)
......... ++..+.. ......+.+++..|++.+|.+| |++
T Consensus 286 ~~~~~~~~~----------------~~~~~~~----------------------~~~~~~~~~~~~~~l~~~p~~r~~~~ 327 (365)
T 3e7e_A 286 VKNEGGECK----------------PEGLFRR----------------------LPHLDMWNEFFHVMLNIPDCHHLPSL 327 (365)
T ss_dssp EEEETTEEE----------------ECSCCTT----------------------CSSHHHHHHHHHHHHCCCCTTCCCCH
T ss_pred ccCCCCcee----------------echhccc----------------------cCcHHHHHHHHHHHcCCCCCCcchHH
Confidence 543221100 0000000 0014456788899999999998 688
Q ss_pred HHHHHHHHHHHHHH
Q 011508 457 EEVAAQLLSFRNKL 470 (484)
Q Consensus 457 ~evl~~L~~i~~~~ 470 (484)
+++.+.|+++....
T Consensus 328 ~~l~~~l~~~l~~~ 341 (365)
T 3e7e_A 328 DLLRQKLKKVFQQH 341 (365)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 88888888876653
No 165
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=2e-42 Score=344.39 Aligned_cols=254 Identities=24% Similarity=0.313 Sum_probs=191.0
Q ss_pred hcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--------cchHHHHHHHHHHHcCCCCCceeEeeeee
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--------GASKSFIAECQALRSIRHRNLVKIITSCV 228 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~h~niv~~~~~~~ 228 (484)
..++|.+.+.||+|+||.||+|... .+++.||+|++..... .....+.+|+.++++++||||+++++++.
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~ 210 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFER--KTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD 210 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEET--TTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE
T ss_pred hhccEEEEeEEeeCCCeEEEEEEEC--CCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe
Confidence 4578999999999999999999944 4678999999875421 11235789999999999999999999852
Q ss_pred eeccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCC-
Q 011508 229 SVDFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGEL- 307 (484)
Q Consensus 229 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~- 307 (484)
....++||||+++|+|.+++.. ...+++..++.++.|++.||+||| +++|+||||||+|||++.++
T Consensus 211 ------~~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~ 277 (419)
T 3i6u_A 211 ------AEDYYIVLELMEGGELFDKVVG----NKRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEE 277 (419)
T ss_dssp ------SSEEEEEEECCTTCBGGGGTSS----SCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSS
T ss_pred ------cCceEEEEEcCCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCCC
Confidence 2246899999999999998863 345899999999999999999999 88999999999999996544
Q ss_pred --ceEEcccCcccccccccccCCCCccccccccccccccCccccCC---CCCCcccceehhhHHHHHHHhCCCCCCCCcc
Q 011508 308 --TAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG---SEVSTSGDVYSFGILLLEMFTGKGPTNEMFT 382 (484)
Q Consensus 308 --~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~---~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~ 382 (484)
.+||+|||+++..... .......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.....
T Consensus 278 ~~~~kl~DFG~a~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~ 349 (419)
T 3i6u_A 278 DCLIKITDFGHSKILGET--------SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT 349 (419)
T ss_dssp SCCEEECCSSTTTSCC-------------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSS
T ss_pred cceEEEeecccceecCCC--------ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcc
Confidence 5999999999876432 11223569999999999753 5788999999999999999999999976422
Q ss_pred CCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 383 GNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
.. .+...+.........+. ...++..+.+++.+||+.||++|||++|+++.
T Consensus 350 ~~-~~~~~i~~~~~~~~~~~----------------------------~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 350 QV-SLKDQITSGKYNFIPEV----------------------------WAEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp SC-CHHHHHHTTCCCCCHHH----------------------------HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred hH-HHHHHHhcCCCCCCchh----------------------------hcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 21 12211111100000000 11235678999999999999999999999863
No 166
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=1e-43 Score=349.34 Aligned_cols=259 Identities=16% Similarity=0.152 Sum_probs=193.1
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeecc---CccchHHHHHHH---HHHHcCCCCCceeEeeeeeeec
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQ---HRGASKSFIAEC---QALRSIRHRNLVKIITSCVSVD 231 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~---~~l~~l~h~niv~~~~~~~~~~ 231 (484)
.++|.+.+.||+|+||.||+|+. ..+++.||||++... .....+.+.+|+ +++++++||||+++++.+....
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~--~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~ 149 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATD--QETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPF 149 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC---CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCS
T ss_pred CceEEEcceeecCCCEEEEEEEE--CCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhh
Confidence 46788999999999999999994 446789999999743 233457788999 5555568999999985432100
Q ss_pred --cCCC------------c-----eeeEEeecccCCCHHHHHhhcCCC---CCCCCHHHHHHHHHHHHHHHHHHHhcCCC
Q 011508 232 --FQGN------------D-----FEALVYELMVNGSLEEWLHLNRDA---PRNLNLLQRLSIAVDVASTLEYLHHYCET 289 (484)
Q Consensus 232 --~~~~------------~-----~~~lv~e~~~~gsL~~~l~~~~~~---~~~l~~~~~~~i~~~i~~~l~~LH~~~~~ 289 (484)
+... . ..++||||+ +|+|.+++...... ...+++..++.|+.||+.||+||| ++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~ 225 (377)
T 3byv_A 150 DLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HY 225 (377)
T ss_dssp EEEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHH---HT
T ss_pred hhhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHH---hC
Confidence 1111 1 378999999 78999999854211 123556888899999999999999 88
Q ss_pred CeeecCCCCCCeeecCCCceEEcccCcccccccccccCCCCccccccccccccccCccccCCC-----------CCCccc
Q 011508 290 PIVHCDLKPSNVLLDGELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGS-----------EVSTSG 358 (484)
Q Consensus 290 ~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-----------~~~~~~ 358 (484)
+|+||||||+|||++.++.+||+|||+++.... ......| +.|+|||++.+. .++.++
T Consensus 226 ~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~----------~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~ 294 (377)
T 3byv_A 226 GLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA----------RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSF 294 (377)
T ss_dssp TEECSCCCGGGEEECTTCCEEECCGGGCEETTC----------EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHH
T ss_pred CeecCCCCHHHEEEcCCCCEEEEechhheecCC----------cccCCCC-cCccChhhhcccccccccccccccCChhh
Confidence 999999999999999999999999999985422 1223457 999999998877 899999
Q ss_pred ceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHH
Q 011508 359 DVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSV 438 (484)
Q Consensus 359 Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 438 (484)
|||||||++|||++|+.||........ ...+... ...++.++
T Consensus 295 DvwSlG~il~elltg~~Pf~~~~~~~~-------------~~~~~~~-------------------------~~~~~~~~ 336 (377)
T 3byv_A 295 DAWALGLVIYWIWCADLPITKDAALGG-------------SEWIFRS-------------------------CKNIPQPV 336 (377)
T ss_dssp HHHHHHHHHHHHHHSSCCC------CC-------------SGGGGSS-------------------------CCCCCHHH
T ss_pred hHHHHHHHHHHHHHCCCCCcccccccc-------------hhhhhhh-------------------------ccCCCHHH
Confidence 999999999999999999965321110 0000000 01125578
Q ss_pred HhHhhccCCCCcCCCCCHHHHHH--HHHHHHHHHh
Q 011508 439 LGIGVICSSELPRERMNMEEVAA--QLLSFRNKLV 471 (484)
Q Consensus 439 ~~l~~~cl~~dP~~RPt~~evl~--~L~~i~~~~~ 471 (484)
.+++.+||+.||++|||+.|+++ .++.++....
T Consensus 337 ~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~~~~~ 371 (377)
T 3byv_A 337 RALLEGFLRYPKEDRLLPLQAMETPEYEQLRTELS 371 (377)
T ss_dssp HHHHHHHTCSSGGGCCCHHHHHTSHHHHHHHHHHH
T ss_pred HHHHHHHcCCCchhCCCHHHHhhChHHHHHHHHHH
Confidence 89999999999999999999996 5666665543
No 167
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=7.4e-43 Score=328.96 Aligned_cols=258 Identities=22% Similarity=0.293 Sum_probs=202.2
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
.++|++.+.||+|+||.||+|... .+++.||+|++..... ...+.+.+|+.++++++||||+++++++.. ..+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~~~ 79 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRK--SDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIID---RTN 79 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEET--TTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE---GGG
T ss_pred hhheeeehhccCCCCcEEEEEEEC--CCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEec---CCC
Confidence 467899999999999999999854 4578999999975432 234578899999999999999999998653 234
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC-----eeecCCCCCCeeecCCCceE
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETP-----IVHCDLKPSNVLLDGELTAH 310 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~-----ivH~dlk~~NIll~~~~~~k 310 (484)
...++||||+++++|.+++.........+++..++.++.|++.||+||| +.+ |+||||||+||+++.++.+|
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~ivH~dl~p~NIl~~~~~~~k 156 (279)
T 2w5a_A 80 TTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH---RRSDGGHTVLHRDLKPANVFLDGKQNVK 156 (279)
T ss_dssp TEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHC------CCCCCSGGGEEECSSSCEE
T ss_pred ceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHh---cccCCCCeeEEeccchhhEEEcCCCCEE
Confidence 5789999999999999999865544556999999999999999999999 666 99999999999999999999
Q ss_pred EcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHH
Q 011508 311 VSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNF 390 (484)
Q Consensus 311 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~ 390 (484)
|+|||.+....... .......|+..|+|||.+.+..++.++||||||+++|+|++|+.||...... .+...
T Consensus 157 l~dfg~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~ 227 (279)
T 2w5a_A 157 LGDFGLARILNHDT-------SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK--ELAGK 227 (279)
T ss_dssp ECCCCHHHHC---C-------HHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHH
T ss_pred EecCchheeecccc-------ccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHH--HHHHH
Confidence 99999998653221 1112345899999999999889999999999999999999999999753211 11111
Q ss_pred HHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHH
Q 011508 391 VKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQL 463 (484)
Q Consensus 391 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 463 (484)
+.. . ..+.+ +..++.++.+++.+||+.||++|||+.||++.+
T Consensus 228 i~~---~-----~~~~~-----------------------~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~ 269 (279)
T 2w5a_A 228 IRE---G-----KFRRI-----------------------PYRYSDELNEIITRMLNLKDYHRPSVEEILENP 269 (279)
T ss_dssp HHH---T-----CCCCC-----------------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTST
T ss_pred Hhh---c-----ccccC-----------------------CcccCHHHHHHHHHHcCCCcccCCCHHHHHhCh
Confidence 100 0 00000 112356789999999999999999999998765
No 168
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=2.7e-42 Score=334.94 Aligned_cols=247 Identities=25% Similarity=0.328 Sum_probs=195.1
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCcc---chHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRG---ASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
+.|++.+.||+|+||.||+|+. ..+++.||||++...... ..+.+.+|++++++++||||+++++++.. +
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~--~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-----~ 126 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARD--VRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR-----E 126 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEE--TTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-----T
T ss_pred hheeeeeEEccCCCEEEEEEEE--ccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE-----C
Confidence 4588889999999999999984 346789999999754322 23568899999999999999999998643 4
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
...++||||+. |+|.+++.... ..+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||
T Consensus 127 ~~~~lv~e~~~-g~l~~~l~~~~---~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG 199 (348)
T 1u5q_A 127 HTAWLVMEYCL-GSASDLLEVHK---KPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFG 199 (348)
T ss_dssp TEEEEEEECCS-EEHHHHHHHHT---SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTEEEECCCT
T ss_pred CeEEEEEecCC-CCHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEeecc
Confidence 48899999996 68888886432 35899999999999999999999 8899999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccC---CCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHH
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGM---GSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVK 392 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 392 (484)
++...... ....||+.|+|||++. ...++.++|||||||++|||++|+.||...... ....
T Consensus 200 ~a~~~~~~-----------~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~-----~~~~ 263 (348)
T 1u5q_A 200 SASIMAPA-----------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-----SALY 263 (348)
T ss_dssp TCBSSSSB-----------CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-----HHHH
T ss_pred CceecCCC-----------CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-----HHHH
Confidence 99765321 1246899999999874 567899999999999999999999998653211 1111
Q ss_pred hhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 393 EALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 393 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
.... -..+.+. ...++..+.+++..||+.||++|||++|+++.
T Consensus 264 ~~~~-----~~~~~~~----------------------~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 264 HIAQ-----NESPALQ----------------------SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp HHHH-----SCCCCCC----------------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred HHHh-----cCCCCCC----------------------CCCCCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 0000 0000000 11225568899999999999999999999854
No 169
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=3.3e-42 Score=349.94 Aligned_cols=257 Identities=24% Similarity=0.335 Sum_probs=203.7
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCC
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQG 234 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 234 (484)
.++|.+.+.||+|+||.||+|+.. .+++.||+|++.... ......+.+|+.++++++||||+++++++ ..
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~--~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~-----~~ 256 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMK--ATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAF-----ET 256 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEET--TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEE-----EC
T ss_pred hhheEEEEEEeeCCCeEEEEEEEC--CCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEE-----ee
Confidence 367889999999999999999954 467899999997542 23346788999999999999999999985 44
Q ss_pred CceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEccc
Q 011508 235 NDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDF 314 (484)
Q Consensus 235 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 314 (484)
....++||||+++|+|.+++.........+++..++.++.||+.||+||| +++|+||||||+||+++.++.+||+||
T Consensus 257 ~~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~gIvHrDLKP~NILl~~~g~vkL~DF 333 (543)
T 3c4z_A 257 KTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDL 333 (543)
T ss_dssp SSEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCC
T ss_pred CCEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHH---HcCCcccCCChHHEEEeCCCCEEEeec
Confidence 55889999999999999999865544557999999999999999999999 899999999999999999999999999
Q ss_pred CcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhh
Q 011508 315 GLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEA 394 (484)
Q Consensus 315 g~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 394 (484)
|+++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||....... .........
T Consensus 334 Gla~~~~~~~-------~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~-~~~~~~~~i 405 (543)
T 3c4z_A 334 GLAVELKAGQ-------TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV-ENKELKQRV 405 (543)
T ss_dssp TTCEECCTTC-------CCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCC-CHHHHHHHH
T ss_pred ceeeeccCCC-------cccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccch-hHHHHHHHH
Confidence 9998764321 11223579999999999999999999999999999999999999997642211 111111111
Q ss_pred cchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCH-----HHHHH
Q 011508 395 LPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNM-----EEVAA 461 (484)
Q Consensus 395 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~-----~evl~ 461 (484)
....... +..++..+.+++.+||+.||++||++ +||++
T Consensus 406 --------~~~~~~~---------------------p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 406 --------LEQAVTY---------------------PDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp --------HHCCCCC---------------------CTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred --------hhcccCC---------------------CcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 1000000 12225678899999999999999975 55553
No 170
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=6.6e-42 Score=333.43 Aligned_cols=286 Identities=19% Similarity=0.252 Sum_probs=200.0
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCCCCceeEeeeeeeecc---C
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIRHRNLVKIITSCVSVDF---Q 233 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~---~ 233 (484)
++|++.+.||+|+||.||+|+.. .+++.||+|++..... .....+.+|+.+++.++||||+++++++..... .
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 94 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHR--KTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNR 94 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEET--TTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC------
T ss_pred cceeEEEEEecCCCcEEEEEEEC--CCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeecccccccc
Confidence 67999999999999999999953 4678999999865432 234578899999999999999999998765321 1
Q ss_pred CCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcc
Q 011508 234 GNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSD 313 (484)
Q Consensus 234 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~D 313 (484)
.....++||||++ ++|.+.+... ...+++.+++.++.|++.||+||| +++|+||||||+||+++.++.+||+|
T Consensus 95 ~~~~~~lv~e~~~-~~l~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~kl~D 167 (351)
T 3mi9_A 95 CKGSIYLVFDFCE-HDLAGLLSNV---LVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLAD 167 (351)
T ss_dssp --CEEEEEEECCS-EEHHHHHHCT---TSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECC
T ss_pred CCceEEEEEeccC-CCHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCCEEEcc
Confidence 1456899999996 5788777633 245899999999999999999999 89999999999999999999999999
Q ss_pred cCcccccccccccCCCCccccccccccccccCccccCC-CCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHH
Q 011508 314 FGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVK 392 (484)
Q Consensus 314 fg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 392 (484)
||++......... .........||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... .....+.
T Consensus 168 fg~a~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--~~~~~i~ 242 (351)
T 3mi9_A 168 FGLARAFSLAKNS---QPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQ--HQLALIS 242 (351)
T ss_dssp CTTCEECCCCSSS---SCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHH
T ss_pred chhcccccccccc---cccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHH
Confidence 9999876432211 1122234568999999998876 56899999999999999999999999764221 1111111
Q ss_pred hh---cchh-hhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 393 EA---LPER-LAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 393 ~~---~~~~-~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
.. .+.. ....-+............... ..............+.+|+.+||+.||++|||++|+++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 243 QLCGSITPEVWPNVDNYELYEKLELVKGQKR----KVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp HHHCCCCTTTSTTGGGCGGGTSSCCCSSCCC----CHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHhCCCChhhccccccchhhccccccccccc----CHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 11 0111 000000000000000000000 000000001113568899999999999999999999863
No 171
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.9e-42 Score=330.19 Aligned_cols=277 Identities=21% Similarity=0.276 Sum_probs=195.7
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCcc--chHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCc
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRG--ASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
++|++.+.||+|+||.||+|+.. .+++.||+|++...... ..+.+.+|++++++++||||+++++++. ...
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~~~ 75 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNR--DTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFR-----RKR 75 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEET--TTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-----ETT
T ss_pred ccceEeeEEeecCCeEEEEEEeC--CCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheee-----cCC
Confidence 57899999999999999999954 45788999988654332 2356789999999999999999999964 345
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCc
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGL 316 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 316 (484)
..++||||+++++|.+++... ..+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||.
T Consensus 76 ~~~lv~e~~~~~~l~~~~~~~----~~~~~~~~~~i~~~l~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 148 (311)
T 4agu_A 76 RLHLVFEYCDHTVLHELDRYQ----RGVPEHLVKSITWQTLQAVNFCH---KHNCIHRDVKPENILITKHSVIKLCDFGF 148 (311)
T ss_dssp EEEEEEECCSEEHHHHHHHTS----SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred eEEEEEEeCCCchHHHHHhhh----cCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCChhhEEEcCCCCEEEeeCCC
Confidence 789999999999999988633 35899999999999999999999 89999999999999999999999999999
Q ss_pred ccccccccccCCCCccccccccccccccCccccCC-CCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHH---H
Q 011508 317 AKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFV---K 392 (484)
Q Consensus 317 a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~---~ 392 (484)
+....... .......||..|+|||++.+ ..++.++||||||+++|+|++|+.||........ ..... .
T Consensus 149 ~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~~ 220 (311)
T 4agu_A 149 ARLLTGPS-------DYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQ-LYLIRKTLG 220 (311)
T ss_dssp CEECC-------------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHC
T ss_pred chhccCcc-------cccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhc
Confidence 98764322 11223468999999998865 6789999999999999999999999976422111 11100 0
Q ss_pred hhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 393 EALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 393 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
...+....................... .........++..+.+++.+||+.||++|||++|+++.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 221 DLIPRHQQVFSTNQYFSGVKIPDPEDM-----EPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp SCCHHHHHHHHTCGGGTTCCCCCCSSC-----CCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred ccccccccccccccccccCcCCCcccc-----chhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 001100000000000000000000000 00000012235678999999999999999999999853
No 172
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=4.3e-42 Score=331.83 Aligned_cols=278 Identities=21% Similarity=0.237 Sum_probs=201.9
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCC-CCCceeEeeeeeeeccCCCc
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIR-HRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~~ 236 (484)
.++|++.+.||+|+||.||+|+. ..+++.||+|+++.. ..+.+.+|+.++++++ ||||+++++++.. ....
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~---~~~~ 106 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAIN--ITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKD---PVSR 106 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEE--TTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEEC---TTTC
T ss_pred CCceEEEEEecccCCeEEEEEEE--CCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeecc---CCCC
Confidence 46799999999999999999984 345789999998743 3467899999999997 9999999998643 2245
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCC-ceEEcccC
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGEL-TAHVSDFG 315 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~-~~kl~Dfg 315 (484)
..++||||+++++|.+++. .+++..+..++.|++.||+||| +++|+||||||+||+++.++ .+||+|||
T Consensus 107 ~~~lv~e~~~~~~l~~~~~-------~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg 176 (330)
T 3nsz_A 107 TPALVFEHVNNTDFKQLYQ-------TLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWG 176 (330)
T ss_dssp CEEEEEECCCCCCHHHHGG-------GCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCT
T ss_pred ceEEEEeccCchhHHHHHH-------hCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEcCCCCEEEEEeCC
Confidence 7899999999999999885 2789999999999999999999 89999999999999999776 89999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCC-CCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhh
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEA 394 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 394 (484)
+++...... ......++..|+|||++.+ ..++.++|||||||++|||++|+.||.........+.......
T Consensus 177 ~a~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~ 248 (330)
T 3nsz_A 177 LAEFYHPGQ--------EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVL 248 (330)
T ss_dssp TCEECCTTC--------CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHH
T ss_pred CceEcCCCC--------ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhc
Confidence 998664322 1223468999999999877 6789999999999999999999999965433222222222221
Q ss_pred cchhhhhhcCccc-cccccccc---chhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 395 LPERLAEIVDPVL-LVEREEGE---TSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 395 ~~~~~~~~~d~~l-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
......+.++..- ...+.... ..................+..++.+++.+||+.||++|||++|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 249 GTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp CHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred CCchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 1111111111000 00000000 0000000000011112234678999999999999999999999986
No 173
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=4.4e-43 Score=359.53 Aligned_cols=258 Identities=29% Similarity=0.467 Sum_probs=205.7
Q ss_pred HhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 156 KATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 156 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
...++|++.+.||+|+||.||+|++.. +..||||+++... ...+.|.+|+++|++++|+||+++++++..
T Consensus 264 i~~~~~~~~~~lG~G~fg~Vy~~~~~~---~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~------ 333 (535)
T 2h8h_A 264 IPRESLRLEVKLGQGCFGEVWMGTWNG---TTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE------ 333 (535)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETT---TEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS------
T ss_pred cchhhhhhheecccCCCeEEEEEEECC---CceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee------
Confidence 345678889999999999999999753 4669999997644 345789999999999999999999998632
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
...++||||+++|+|.+++.... ...+++.+++.++.||+.||+||| +++|+||||||+|||++.++.+||+|||
T Consensus 334 ~~~~lv~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG 408 (535)
T 2h8h_A 334 EPIYIVTEYMSKGSLLDFLKGET--GKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFG 408 (535)
T ss_dssp SSCEEEECCCTTEEHHHHHSHHH--HTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCTT
T ss_pred ccceEeeehhcCCcHHHHHhhcC--CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEEcCCCcEEEcccc
Confidence 35799999999999999997432 234889999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHhh
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKEA 394 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~~ 394 (484)
+++....... .......++..|+|||++....++.++|||||||++|||++ |+.||...... +.....
T Consensus 409 ~a~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~-----~~~~~i 477 (535)
T 2h8h_A 409 LARLIEDNEY------TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-----EVLDQV 477 (535)
T ss_dssp STTTCCCHHH------HTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH-----HHHHHH
T ss_pred cceecCCCce------ecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHH
Confidence 9987643211 11122346789999999988899999999999999999999 99999753211 111100
Q ss_pred cchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHH
Q 011508 395 LPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFR 467 (484)
Q Consensus 395 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~ 467 (484)
..-.. + ..+..|+..+.+|+..||+.||++|||+++|++.|+.+.
T Consensus 478 -----~~~~~--~---------------------~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~ 522 (535)
T 2h8h_A 478 -----ERGYR--M---------------------PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 522 (535)
T ss_dssp -----HTTCC--C---------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred -----HcCCC--C---------------------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 00000 0 002334667899999999999999999999999998764
No 174
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=6.5e-42 Score=323.37 Aligned_cols=247 Identities=22% Similarity=0.328 Sum_probs=199.6
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
++|.+.+.||+|+||.||+|+.. .++..||+|++.... ......+.+|++++++++||||+++++++. ..
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~ 86 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREK--QNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFH-----DR 86 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEET--TTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEE-----CS
T ss_pred hhceeeheecCCCCeEEEEEEEc--CCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEE-----cC
Confidence 57899999999999999999854 457889999986432 223467899999999999999999999854 34
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
...++||||+++++|.+++.... .+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||
T Consensus 87 ~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg 159 (284)
T 2vgo_A 87 KRIYLMLEFAPRGELYKELQKHG----RFDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFG 159 (284)
T ss_dssp SEEEEEECCCTTEEHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTCCEEECCCT
T ss_pred CEEEEEEEeCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEEcCCCCEEEeccc
Confidence 58899999999999999997543 4899999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhc
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEAL 395 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 395 (484)
++....... .....|+..|+|||.+.+..++.++||||||+++|+|++|+.||...... ....
T Consensus 160 ~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~--- 222 (284)
T 2vgo_A 160 WSVHAPSLR---------RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT-----ETHR--- 222 (284)
T ss_dssp TCEECSSSC---------BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH-----HHHH---
T ss_pred ccccCcccc---------cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHh-----HHHH---
Confidence 987553211 12346899999999999999999999999999999999999999753211 1111
Q ss_pred chhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 396 PERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 396 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
.+....... +..++..+.+++..||+.||.+|||++|+++.
T Consensus 223 -----~~~~~~~~~---------------------~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 223 -----RIVNVDLKF---------------------PPFLSDGSKDLISKLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp -----HHHTTCCCC---------------------CTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTC
T ss_pred -----HHhccccCC---------------------CCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhC
Confidence 111100000 11124568899999999999999999999874
No 175
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=4.2e-42 Score=349.90 Aligned_cols=256 Identities=27% Similarity=0.345 Sum_probs=202.9
Q ss_pred hcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccC
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQ 233 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 233 (484)
..++|++.+.||+|+||.||+|+.. .+++.||+|++.... ......+.+|+++|+.++||||+++++++ .
T Consensus 182 ~~~~f~~~~~LG~G~fG~Vy~a~~~--~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~-----~ 254 (576)
T 2acx_A 182 TKNTFRQYRVLGKGGFGEVCACQVR--ATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAY-----E 254 (576)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEET--TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEE-----E
T ss_pred cccceEEEEEEeeCCCEEEEEEEEC--CCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEE-----e
Confidence 3467899999999999999999954 467899999997532 23446788999999999999999999985 4
Q ss_pred CCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcc
Q 011508 234 GNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSD 313 (484)
Q Consensus 234 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~D 313 (484)
..+..++||||+++|+|.+++.... ...+++..++.++.||+.||+||| +++|+||||||+|||++.++.+||+|
T Consensus 255 ~~~~l~lVmEy~~gg~L~~~l~~~~--~~~l~e~~~~~i~~qIl~aL~yLH---~~gIvHrDLKPeNILld~~g~vKL~D 329 (576)
T 2acx_A 255 TKDALCLVLTLMNGGDLKFHIYHMG--QAGFPEARAVFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISD 329 (576)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHSSS--SCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECC
T ss_pred eCCEEEEEEEcCCCCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCchheEEEeCCCCeEEEe
Confidence 4558999999999999999997432 234899999999999999999999 89999999999999999999999999
Q ss_pred cCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHh
Q 011508 314 FGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKE 393 (484)
Q Consensus 314 fg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 393 (484)
||+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ........
T Consensus 330 FGla~~~~~~~--------~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~-~~~~i~~~ 400 (576)
T 2acx_A 330 LGLAVHVPEGQ--------TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI-KREEVERL 400 (576)
T ss_dssp CTTCEECCTTC--------CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCC-CHHHHHHH
T ss_pred cccceecccCc--------cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccch-hHHHHHHH
Confidence 99998764321 1223479999999999999999999999999999999999999997643211 11111110
Q ss_pred hcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCC-----CHHHHHHH
Q 011508 394 ALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERM-----NMEEVAAQ 462 (484)
Q Consensus 394 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~ 462 (484)
. ... ...+ +..++.++.+++.+||+.||++|| +++||++.
T Consensus 401 i-----~~~-~~~~-----------------------p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 401 V-----KEV-PEEY-----------------------SERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp H-----HHC-CCCC-----------------------CTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred h-----hcc-cccC-----------------------CccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 0 000 0000 112256789999999999999999 78888753
No 176
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=1.2e-42 Score=329.43 Aligned_cols=254 Identities=23% Similarity=0.276 Sum_probs=185.3
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccc-h-HHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGA-S-KSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~-~-~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
.++|++.+.||+|+||.||+|+. ..+++.||+|+++...... . +.+.++...++.++||||+++++++. .+
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~-----~~ 78 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRH--VPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALF-----RE 78 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEE--TTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEE-----CS
T ss_pred HHhhhhHHhcCCCCCeEEEEEEe--cCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeee-----cc
Confidence 46789999999999999999994 3467899999997543222 2 33445555678889999999999864 34
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CeeecCCCCCCeeecCCCceEEccc
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCET-PIVHCDLKPSNVLLDGELTAHVSDF 314 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~dlk~~NIll~~~~~~kl~Df 314 (484)
...++||||++ |+|.+++.........+++..++.++.|++.||+||| ++ +|+||||||+||+++.++.+||+||
T Consensus 79 ~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~Df 154 (290)
T 3fme_A 79 GDVWICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDF 154 (290)
T ss_dssp SSEEEEEECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHSCCCCCCCSGGGCEECTTCCEEBCCC
T ss_pred CCEEEEEehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeec
Confidence 47899999996 5998888754444557999999999999999999999 76 9999999999999999999999999
Q ss_pred CcccccccccccCCCCccccccccccccccCcccc----CCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHH
Q 011508 315 GLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYG----MGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNF 390 (484)
Q Consensus 315 g~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~----~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~ 390 (484)
|++....... ......||+.|+|||++ .+..++.++||||||+++|||++|+.||.........+...
T Consensus 155 g~~~~~~~~~--------~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~ 226 (290)
T 3fme_A 155 GISGYLVDDV--------AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV 226 (290)
T ss_dssp -----------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHH
T ss_pred CCcccccccc--------cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHH
Confidence 9998663321 11223589999999995 56678999999999999999999999997532211111111
Q ss_pred HHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 391 VKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 391 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
..... +.. ....++.++.+++.+||+.||++|||+.|+++
T Consensus 227 ~~~~~---------~~~----------------------~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 227 VEEPS---------PQL----------------------PADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp HHSCC---------CCC----------------------CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred hccCC---------CCc----------------------ccccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 11000 000 01223567899999999999999999999987
No 177
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=7.2e-42 Score=324.87 Aligned_cols=253 Identities=25% Similarity=0.344 Sum_probs=195.1
Q ss_pred CCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCceee
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFEA 239 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 239 (484)
+|.....||+|+||.||+|+. ..++..||+|.+........+.+.+|+.+++.++||||+++++++.. .+..+
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~--~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-----~~~~~ 95 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRD--LSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSE-----NGFIK 95 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEE--TTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEE-----TTEEE
T ss_pred CCCCcEEEeecCcEEEEEEEE--CCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEe-----CCcEE
Confidence 455556899999999999994 34578899999987665566789999999999999999999998643 44789
Q ss_pred EEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecC-CCceEEcccCccc
Q 011508 240 LVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDG-ELTAHVSDFGLAK 318 (484)
Q Consensus 240 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~-~~~~kl~Dfg~a~ 318 (484)
+||||+++++|.+++.... ....+++..++.++.|++.||+||| +++|+||||||+||+++. ++.+||+|||.+.
T Consensus 96 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~ 171 (295)
T 2clq_A 96 IFMEQVPGGSLSALLRSKW-GPLKDNEQTIGFYTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSK 171 (295)
T ss_dssp EEEECCSEEEHHHHHHHTT-CCCTTCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTCCEEECCTTTCE
T ss_pred EEEEeCCCCCHHHHHHhhc-cCCCccHHHHHHHHHHHHHHHHHHH---hCCEEccCCChhhEEEECCCCCEEEeeccccc
Confidence 9999999999999997543 2335778999999999999999999 889999999999999987 8899999999998
Q ss_pred ccccccccCCCCccccccccccccccCccccCCCC--CCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcc
Q 011508 319 FLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSE--VSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALP 396 (484)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~--~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 396 (484)
...... .......|+..|+|||++.+.. ++.++||||||+++|+|++|+.||......... ....
T Consensus 172 ~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~---~~~~--- 238 (295)
T 2clq_A 172 RLAGIN-------PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAA---MFKV--- 238 (295)
T ss_dssp ESCC------------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHH---HHHH---
T ss_pred ccCCCC-------CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHH---HHhh---
Confidence 653321 1122346899999999986643 789999999999999999999999643211100 0000
Q ss_pred hhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 397 ERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 397 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
... ...+.+ +..++.++.+++.+||+.||++|||+.|+++
T Consensus 239 -~~~-~~~~~~-----------------------~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 239 -GMF-KVHPEI-----------------------PESMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp -HHH-CCCCCC-----------------------CTTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred -ccc-cccccc-----------------------cccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 000 000000 1223567889999999999999999999985
No 178
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=3e-42 Score=339.84 Aligned_cols=251 Identities=24% Similarity=0.385 Sum_probs=191.5
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCC--CCCceeEeeeeeeeccCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIR--HRNLVKIITSCVSVDFQG 234 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~~~~~ 234 (484)
.+|++.+.||+|+||.||+|... .+..||||++..... ...+.+.+|+.++++++ ||||+++++++..
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~---~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~----- 127 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNE---KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT----- 127 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECT---TCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-----
T ss_pred CceEEEEEEccCCCeEEEEEEcC---CCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEec-----
Confidence 45999999999999999999843 378899999975432 23467899999999996 5999999998643
Q ss_pred CceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEccc
Q 011508 235 NDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDF 314 (484)
Q Consensus 235 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 314 (484)
++..++||| +.+++|.+++.... .+++.+++.++.||+.||+||| +++|+||||||+|||++ ++.+||+||
T Consensus 128 ~~~~~lv~E-~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~-~~~~kl~DF 198 (390)
T 2zmd_A 128 DQYIYMVME-CGNIDLNSWLKKKK----SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDF 198 (390)
T ss_dssp SSEEEEEEE-CCSEEHHHHHHHCS----SCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCCGGGEEES-SSCEEECCC
T ss_pred CCEEEEEEe-cCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEEE-CCeEEEEec
Confidence 447899999 56889999998542 5889999999999999999999 89999999999999996 579999999
Q ss_pred CcccccccccccCCCCccccccccccccccCccccCC-----------CCCCcccceehhhHHHHHHHhCCCCCCCCccC
Q 011508 315 GLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-----------SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTG 383 (484)
Q Consensus 315 g~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-----------~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~ 383 (484)
|+++.+..... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||......
T Consensus 199 G~a~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~ 273 (390)
T 2zmd_A 199 GIANQMQPDTT-----SVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ 273 (390)
T ss_dssp SSSCCC--------------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCH
T ss_pred CccccccCCCc-----cccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHH
Confidence 99987643221 111223569999999998764 46889999999999999999999999653211
Q ss_pred CccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 384 NLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
. .. +..++++...... +..+...+.+++..||+.||++|||+.|+++.
T Consensus 274 ~----~~--------~~~~~~~~~~~~~-------------------~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 274 I----SK--------LHAIIDPNHEIEF-------------------PDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp H----HH--------HHHHHCTTSCCCC-------------------CCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred H----HH--------HHHHhCccccCCC-------------------CccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 0 01 1122222111100 11114568899999999999999999999864
No 179
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=7.5e-43 Score=338.58 Aligned_cols=258 Identities=23% Similarity=0.287 Sum_probs=197.7
Q ss_pred HHhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc-cchHHHHHHHHH-HHcCCCCCceeEeeeeeeecc
Q 011508 155 FKATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR-GASKSFIAECQA-LRSIRHRNLVKIITSCVSVDF 232 (484)
Q Consensus 155 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~-l~~l~h~niv~~~~~~~~~~~ 232 (484)
....++|++.+.||+|+||.||+|+. ..+++.||||++..... .....+..|..+ ++.++||||+++++++..
T Consensus 47 ~~~~~~~~~~~~lG~G~~g~Vy~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~--- 121 (340)
T 3an0_A 47 EVKADDLEPIMELGRGAYGVVEKMRH--VPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFR--- 121 (340)
T ss_dssp CCCSSCEEEEEEEEECSSEEEEEEEE--TTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEEC---
T ss_pred EEehhheeEeeEecccCCEEEEEEEE--cCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEe---
Confidence 34567899999999999999999985 34578999999975533 233455566665 777899999999999643
Q ss_pred CCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CeeecCCCCCCeeecCCCceEE
Q 011508 233 QGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCET-PIVHCDLKPSNVLLDGELTAHV 311 (484)
Q Consensus 233 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~dlk~~NIll~~~~~~kl 311 (484)
++..++||||+++ +|.+++.........+++..++.++.||+.||+||| ++ +|+||||||+||+++.++.+||
T Consensus 122 --~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~~ivH~Dlkp~NIl~~~~~~~kl 195 (340)
T 3an0_A 122 --EGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKM 195 (340)
T ss_dssp --SSCEEEEECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCSCCSTTEEECSTTCEEE
T ss_pred --CCcEEEEHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEE
Confidence 4478999999965 999998754334456999999999999999999999 66 9999999999999999999999
Q ss_pred cccCcccccccccccCCCCccccccccccccccCccccC----CCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccH
Q 011508 312 SDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGM----GSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTL 387 (484)
Q Consensus 312 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~----~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~ 387 (484)
+|||++....... ......||..|+|||++. ...++.++|||||||++|||+||+.||.........+
T Consensus 196 ~Dfg~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~ 267 (340)
T 3an0_A 196 CDFGISGYLVDSV--------AKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQL 267 (340)
T ss_dssp CCCSHHHHHSCHH--------HHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHH
T ss_pred eeCCCceeccccc--------ccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHH
Confidence 9999998653221 112246899999999864 3478999999999999999999999997532111111
Q ss_pred hHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 388 HNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 388 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
...... ..+.+ ....++.++.+++.+||+.||++|||+.|+++.
T Consensus 268 ~~~~~~---------~~~~~----------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 311 (340)
T 3an0_A 268 KQVVEE---------PSPQL----------------------PADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 311 (340)
T ss_dssp HHHHHS---------CCCCC----------------------CGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHHhcC---------CCCCC----------------------CcccCCHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 111100 00000 012235678999999999999999999999873
No 180
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=6.1e-42 Score=342.43 Aligned_cols=212 Identities=25% Similarity=0.340 Sum_probs=169.8
Q ss_pred hcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCC
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQG 234 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 234 (484)
..++|.+.+.||+|+||.||+|+. ..+++.||||++..... ...+.+.+|+.++++++||||+++++++.......
T Consensus 24 i~~~y~~~~~lG~G~~g~V~~a~~--~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 101 (432)
T 3n9x_A 24 VPDNYIIKHLIGRGSYGYVYLAYD--KNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLK 101 (432)
T ss_dssp CCTTEEEEEEEEEETTEEEEEEEE--TTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTT
T ss_pred ecCCEEEEEEEeecCCEEEEEEEE--CCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCc
Confidence 357899999999999999999994 44678999999975432 23467889999999999999999999976554444
Q ss_pred CceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEccc
Q 011508 235 NDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDF 314 (484)
Q Consensus 235 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 314 (484)
....++||||+. ++|.+++.. ...+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+||+||
T Consensus 102 ~~~~~lv~e~~~-~~L~~~~~~----~~~l~~~~~~~i~~qil~aL~~LH---~~givHrDlkp~NILl~~~~~~kL~DF 173 (432)
T 3n9x_A 102 FDELYIVLEIAD-SDLKKLFKT----PIFLTEEHIKTILYNLLLGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDF 173 (432)
T ss_dssp CCCEEEEEECCS-EEHHHHHHS----SCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCC
T ss_pred CCeEEEEEecCC-cCHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCHHHeEECCCCCEEEccC
Confidence 467899999995 699999973 245899999999999999999999 899999999999999999999999999
Q ss_pred CcccccccccccCCC---------------CccccccccccccccCcccc-CCCCCCcccceehhhHHHHHHHhCCCCCC
Q 011508 315 GLAKFLPEAANNLSS---------------NQSSSVGVKGTVGYAAPEYG-MGSEVSTSGDVYSFGILLLEMFTGKGPTN 378 (484)
Q Consensus 315 g~a~~~~~~~~~~~~---------------~~~~~~~~~g~~~y~aPE~~-~~~~~~~~~Dvws~Gvvl~elltg~~p~~ 378 (484)
|+++........... .........||+.|+|||++ ....++.++||||+||++|||++|..||.
T Consensus 174 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 174 GLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp TTCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred CCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 999876443211000 00122456799999999985 56679999999999999999998766654
No 181
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=1.1e-41 Score=321.67 Aligned_cols=257 Identities=20% Similarity=0.265 Sum_probs=200.0
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCcc------chHHHHHHHHHHHcCCCCCceeEeeeeeeecc
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRG------ASKSFIAECQALRSIRHRNLVKIITSCVSVDF 232 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 232 (484)
++|++.+.||+|+||.||+|+.. .+++.||+|+++..... ..+.+.+|+.++++++||||+++++++.
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~--~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~---- 78 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQK--GTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFE---- 78 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEET--TTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEE----
T ss_pred hhhhhHHhhcccCceEEEEEEEc--CCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheec----
Confidence 46889999999999999999954 45788999998754321 3567899999999999999999999864
Q ss_pred CCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCC----c
Q 011508 233 QGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGEL----T 308 (484)
Q Consensus 233 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~----~ 308 (484)
.....++||||+++++|.+++... ..+++..++.++.|++.||+||| +++|+||||||+||+++.++ .
T Consensus 79 -~~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~~~ 150 (283)
T 3bhy_A 79 -NKTDVVLILELVSGGELFDFLAEK----ESLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPR 150 (283)
T ss_dssp -CSSEEEEEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSSSSCC
T ss_pred -CCCeEEEEEeecCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChHHEEEecCCCCCCc
Confidence 345789999999999999999753 34899999999999999999999 89999999999999998877 8
Q ss_pred eEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHh
Q 011508 309 AHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLH 388 (484)
Q Consensus 309 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~ 388 (484)
+||+|||.+....... ......+++.|+|||++.+..++.++||||||+++|+|++|+.||......
T Consensus 151 ~kl~dfg~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----- 217 (283)
T 3bhy_A 151 IKLIDFGIAHKIEAGN--------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQ----- 217 (283)
T ss_dssp EEECCCTTCEECC----------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHH-----
T ss_pred eEEEecccceeccCCC--------cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchH-----
Confidence 9999999998653321 112345899999999999899999999999999999999999999753211
Q ss_pred HHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH--HHHHH
Q 011508 389 NFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA--QLLSF 466 (484)
Q Consensus 389 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~--~L~~i 466 (484)
..... +......... .....++..+.+++.+||+.||++|||+.|+++ .++.+
T Consensus 218 ~~~~~--------~~~~~~~~~~-----------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~ 272 (283)
T 3bhy_A 218 ETLTN--------ISAVNYDFDE-----------------EYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAI 272 (283)
T ss_dssp HHHHH--------HHTTCCCCCH-----------------HHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHH
T ss_pred HHHHH--------hHhcccCCcc-----------------hhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHH
Confidence 11100 0000000000 001122557889999999999999999999997 34544
Q ss_pred H
Q 011508 467 R 467 (484)
Q Consensus 467 ~ 467 (484)
+
T Consensus 273 ~ 273 (283)
T 3bhy_A 273 R 273 (283)
T ss_dssp H
T ss_pred H
Confidence 3
No 182
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=6.8e-42 Score=326.55 Aligned_cols=251 Identities=24% Similarity=0.290 Sum_probs=197.0
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
.++|.+.+.||+|+||.||+|+.. .+++.||+|+++.......+.+.+|+.++++++||||+++++++. ....
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~ 80 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQR--LTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYE-----STTH 80 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEET--TTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEE-----CSSE
T ss_pred hccceeeeeccCCCCceEEEEEEC--CCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcc-----cCCE
Confidence 356889999999999999999843 457889999998655445567889999999999999999999853 4458
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeee---cCCCceEEccc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLL---DGELTAHVSDF 314 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll---~~~~~~kl~Df 314 (484)
.++||||+++++|.+++.... .+++..++.++.|++.||+||| +.+|+||||||+||++ +.++.+||+||
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dikp~NIl~~~~~~~~~~kl~Df 153 (304)
T 2jam_A 81 YYLVMQLVSGGELFDRILERG----VYTEKDASLVIQQVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDF 153 (304)
T ss_dssp EEEEECCCCSCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCSCCGGGCEESSSSTTCCEEBCSC
T ss_pred EEEEEEcCCCccHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEecCCCCCCEEEccC
Confidence 899999999999999987543 4889999999999999999999 8899999999999999 77889999999
Q ss_pred CcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhh
Q 011508 315 GLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEA 394 (484)
Q Consensus 315 g~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 394 (484)
|++...... ......|++.|+|||.+.+..++.++||||||+++|||++|+.||...... ......
T Consensus 154 g~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~~i 219 (304)
T 2jam_A 154 GLSKMEQNG---------IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES-----KLFEKI 219 (304)
T ss_dssp STTCCCCCB---------TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHH-----HHHHHH
T ss_pred CcceecCCC---------ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH-----HHHHHH
Confidence 998754221 112345899999999999999999999999999999999999999753211 111100
Q ss_pred cchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 395 LPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 395 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
........ ......++..+.+++.+||+.||++|||+.|+++
T Consensus 220 --------~~~~~~~~-----------------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 220 --------KEGYYEFE-----------------SPFWDDISESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp --------HHCCCCCC-----------------TTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred --------HcCCCCCC-----------------ccccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 00000000 0001223567899999999999999999999986
No 183
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=1.2e-41 Score=333.20 Aligned_cols=286 Identities=21% Similarity=0.215 Sum_probs=205.8
Q ss_pred HHhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccC
Q 011508 155 FKATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQ 233 (484)
Q Consensus 155 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 233 (484)
+...++|++.+.||+|+||.||+|+. ..++..||+|++..... ...+.+.+|++++++++||||+++++++......
T Consensus 23 ~~~~~~y~~~~~lG~G~~g~V~~~~~--~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 100 (364)
T 3qyz_A 23 FDVGPRYTNLSYIGEGAYGMVCSAYD--NLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIE 100 (364)
T ss_dssp CCCTTTEEEEEEEEECSSEEEEEEEE--TTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTT
T ss_pred ccccccEEEEEEeecCCCeEEEEEEE--CCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCcc
Confidence 34457899999999999999999984 44678999999975432 2336788999999999999999999997665545
Q ss_pred CCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcc
Q 011508 234 GNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSD 313 (484)
Q Consensus 234 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~D 313 (484)
.....++||||+. |+|.+++... .+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|
T Consensus 101 ~~~~~~iv~e~~~-~~L~~~l~~~-----~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~D 171 (364)
T 3qyz_A 101 QMKDVYIVQDLME-TDLYKLLKTQ-----HLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICD 171 (364)
T ss_dssp TCCCEEEEEECCS-EEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECC
T ss_pred ccceEEEEEcccC-cCHHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChHhEEECCCCCEEEEe
Confidence 5567899999995 6999998742 4899999999999999999999 89999999999999999999999999
Q ss_pred cCcccccccccccCCCCccccccccccccccCccccCC-CCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHH
Q 011508 314 FGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVK 392 (484)
Q Consensus 314 fg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 392 (484)
||++......... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... .+.....
T Consensus 172 fg~a~~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i~~ 246 (364)
T 3qyz_A 172 FGLARVADPDHDH----TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD-QLNHILG 246 (364)
T ss_dssp CTTCEECCGGGCB----CCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGG-HHHHHHH
T ss_pred CcceEecCCCCCc----cccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHH-HHHHHHH
Confidence 9999876543211 111233579999999997654 558999999999999999999999997643221 1111111
Q ss_pred hhcc---hhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 393 EALP---ERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 393 ~~~~---~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
.... +.+..+.+............ ............+..++.+++.+||+.||++|||+.|+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 247 ILGSPSQEDLNCIINLKARNYLLSLPH-----KNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp HHCSCCHHHHHTCCCHHHHHHHHTSCC-----CCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HhCCCCHHHHHHhhhhhHHHHHHhcCC-----ccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 1100 00111110000000000000 0000000001223567899999999999999999999986
No 184
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=5.5e-42 Score=325.57 Aligned_cols=250 Identities=22% Similarity=0.255 Sum_probs=200.9
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc---cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCC
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR---GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQG 234 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 234 (484)
.++|.+.+.||+|+||.||+|... .+++.||+|++..... ...+.+.+|+.+++.++||||+++++++. .
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~--~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~ 86 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDA--DTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFE-----D 86 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEET--TTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEE-----C
T ss_pred ccceEEEEEEeecCCEEEEEEEEC--CCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeec-----c
Confidence 357889999999999999999954 4578899999875432 23467889999999999999999999964 3
Q ss_pred CceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEccc
Q 011508 235 NDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDF 314 (484)
Q Consensus 235 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 314 (484)
++..++||||+++++|.+++... ..+++.+++.++.|++.||+||| +++|+||||||+||+++.++.+||+||
T Consensus 87 ~~~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~df 159 (294)
T 2rku_A 87 NDFVFVVLELCRRRSLLELHKRR----KALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDF 159 (294)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCC
T ss_pred CCEEEEEEecCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEcCCCCEEEEec
Confidence 45789999999999999998753 24899999999999999999999 889999999999999999999999999
Q ss_pred CcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhh
Q 011508 315 GLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEA 394 (484)
Q Consensus 315 g~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 394 (484)
|.+....... .......|+..|+|||.+.+..++.++||||||+++|+|++|+.||...... +...
T Consensus 160 g~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-----~~~~-- 225 (294)
T 2rku_A 160 GLATKVEYDG-------ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK-----ETYL-- 225 (294)
T ss_dssp TTCEECCSTT-------CCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH-----HHHH--
T ss_pred cCceecccCc-------cccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHH--
Confidence 9998653221 1122346899999999999888999999999999999999999999753211 1111
Q ss_pred cchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 395 LPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 395 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
.+....... +..+...+.+++.+||+.||++|||++|+++.
T Consensus 226 ------~~~~~~~~~---------------------~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 226 ------RIKKNEYSI---------------------PKHINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp ------HHHTTCCCC---------------------CTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ------HHhhccCCC---------------------ccccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 010000000 11224568899999999999999999999875
No 185
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=3.1e-42 Score=333.51 Aligned_cols=254 Identities=24% Similarity=0.301 Sum_probs=196.1
Q ss_pred hcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcC-CCCCceeEeeeeeeeccCCC
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSI-RHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~ 235 (484)
..++|++.+.||+|+||.||+|+. ..+++.||+|+++.... ...+|++++.++ +||||+++++++ .++
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~--~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~-----~~~ 88 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIH--KATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVY-----DDG 88 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEE--TTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEE-----ECS
T ss_pred ccccEEEEEEEeeCCCEEEEEEEE--CCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEE-----EcC
Confidence 346799999999999999999994 44678999999976543 235688888888 799999999985 445
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCC----CceEE
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGE----LTAHV 311 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~----~~~kl 311 (484)
...++||||+++|+|.+++... ..+++..+..++.||+.||+||| +++|+||||||+||++.++ +.+||
T Consensus 89 ~~~~lv~E~~~gg~L~~~i~~~----~~~~~~~~~~~~~qi~~al~~lH---~~givHrDlkp~NIl~~~~~~~~~~~kl 161 (342)
T 2qr7_A 89 KYVYVVTELMKGGELLDKILRQ----KFFSEREASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRI 161 (342)
T ss_dssp SEEEEEECCCCSCBHHHHHHTC----TTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSCSGGGEEE
T ss_pred CEEEEEEeCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHH---HCCcEeccCCHHHEEEecCCCCcCeEEE
Confidence 6889999999999999999743 35899999999999999999999 8999999999999998443 35999
Q ss_pred cccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHH
Q 011508 312 SDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFV 391 (484)
Q Consensus 312 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 391 (484)
+|||++....... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ......
T Consensus 162 ~Dfg~a~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--~~~~~~ 232 (342)
T 2qr7_A 162 CDFGFAKQLRAEN-------GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDD--TPEEIL 232 (342)
T ss_dssp CCCTTCEECBCTT-------CCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTS--CHHHHH
T ss_pred EECCCcccCcCCC-------CceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcC--CHHHHH
Confidence 9999998764322 1223356899999999988878999999999999999999999999753211 111111
Q ss_pred HhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 392 KEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 392 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
..... ....... ..+..++.++.+++.+||+.||++|||+.|+++.
T Consensus 233 ~~i~~--------~~~~~~~-----------------~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 233 ARIGS--------GKFSLSG-----------------GYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp HHHHH--------CCCCCCS-----------------TTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred HHHcc--------CCcccCc-----------------cccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 11100 0000000 0012235678999999999999999999999864
No 186
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=8.2e-43 Score=335.82 Aligned_cols=278 Identities=22% Similarity=0.268 Sum_probs=192.1
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCcc-chHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCce
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRG-ASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 237 (484)
++|.+.+.||+|+||.||+|+.. .+++.||+|++...... ....+.+|++++++++||||+++++++. .+..
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~ 74 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSK--LTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIH-----TEKS 74 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEET--TTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEE-----CSSC
T ss_pred CceEEEEEEcCCCCEEEEEEEEC--CCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEe-----eCCE
Confidence 57889999999999999999954 45788999998754322 1224567999999999999999999853 4457
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLA 317 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a 317 (484)
.++||||++ |+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 75 ~~lv~e~~~-~~l~~~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a 147 (324)
T 3mtl_A 75 LTLVFEYLD-KDLKQYLDDC---GNIINMHNVKLFLFQLLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLA 147 (324)
T ss_dssp EEEEEECCS-EEHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCCGGGEEECTTCCEEECSSSEE
T ss_pred EEEEecccc-cCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCcCHHHEEECCCCCEEEccCccc
Confidence 899999996 6999998754 235899999999999999999999 899999999999999999999999999999
Q ss_pred cccccccccCCCCccccccccccccccCccccCC-CCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcc
Q 011508 318 KFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALP 396 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 396 (484)
....... .......+|..|+|||++.+ ..++.++|||||||++|||++|+.||....... ....+.....
T Consensus 148 ~~~~~~~-------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~--~~~~i~~~~~ 218 (324)
T 3mtl_A 148 RAKSIPT-------KTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE--QLHFIFRILG 218 (324)
T ss_dssp ECC-------------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHHHHHHHC
T ss_pred ccccCCc-------cccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHhC
Confidence 7653221 11223468999999998876 568999999999999999999999997642211 1111111110
Q ss_pred hhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 397 ERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 397 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
..........+........ ................+..++.+++.+||+.||++|||++|+++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 219 TPTEETWPGILSNEEFKTY--NYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp CCCTTTSTTGGGCHHHHHT--CCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred CCChHhchhhhcchhhccc--ccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 0000000000000000000 00000000000001223567889999999999999999999986
No 187
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=2.2e-42 Score=333.61 Aligned_cols=276 Identities=22% Similarity=0.285 Sum_probs=191.5
Q ss_pred HhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCcc--chHHHHHHHHHHHcCCCCCceeEeeeeeeeccC
Q 011508 156 KATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRG--ASKSFIAECQALRSIRHRNLVKIITSCVSVDFQ 233 (484)
Q Consensus 156 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 233 (484)
...++|++.+.||+|+||.||+|+. ..+++.||+|+++..... ..+.+.+|+.++++++||||+++++++.
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----- 103 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAID--TVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIH----- 103 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEE--TTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEE-----
T ss_pred cchhhEEEEEEEEecCCeEEEEEEE--CCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEe-----
Confidence 3446899999999999999999984 446789999999754322 2356789999999999999999999964
Q ss_pred CCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeec-----CCCc
Q 011508 234 GNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLD-----GELT 308 (484)
Q Consensus 234 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~-----~~~~ 308 (484)
.+...++||||++ |+|.+++.... .+++..++.++.||+.||+||| +++|+||||||+||+++ .++.
T Consensus 104 ~~~~~~lv~e~~~-~~L~~~~~~~~----~~~~~~~~~i~~ql~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~ 175 (329)
T 3gbz_A 104 HNHRLHLIFEYAE-NDLKKYMDKNP----DVSMRVIKSFLYQLINGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPV 175 (329)
T ss_dssp ETTEEEEEEECCS-EEHHHHHHHCT----TCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEC-----CCE
T ss_pred cCCEEEEEEecCC-CCHHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHH---hCCEECCCCCHHHEEEecCCCCccce
Confidence 3458899999996 59999997543 4899999999999999999999 89999999999999994 4556
Q ss_pred eEEcccCcccccccccccCCCCccccccccccccccCccccCCC-CCCcccceehhhHHHHHHHhCCCCCCCCccCCccH
Q 011508 309 AHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGS-EVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTL 387 (484)
Q Consensus 309 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~ 387 (484)
+||+|||++....... .......+|..|+|||++.+. .++.++|||||||++|||++|+.||....... .+
T Consensus 176 ~kl~Dfg~a~~~~~~~-------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~ 247 (329)
T 3gbz_A 176 LKIGDFGLARAFGIPI-------RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEID-QL 247 (329)
T ss_dssp EEECCTTHHHHHC------------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HH
T ss_pred EEECcCCCccccCCcc-------cccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHH-HH
Confidence 9999999998653221 112234579999999998774 58999999999999999999999997632211 11
Q ss_pred hHHHHhh-cchh--hhhhcC-cccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 388 HNFVKEA-LPER--LAEIVD-PVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 388 ~~~~~~~-~~~~--~~~~~d-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
....... .+.. ...... +.......... ....+......+..++.+++.+||+.||++|||++|+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 248 FKIFEVLGLPDDTTWPGVTALPDWKQSFPKFR-------GKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp HHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCC-------CCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHhCCCchhhhhhhhhhhhhhhhhhhhc-------cccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 1111110 0000 000000 00000000000 000000001223567899999999999999999999975
No 188
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=1.3e-41 Score=324.33 Aligned_cols=251 Identities=25% Similarity=0.345 Sum_probs=202.0
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCc
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
.+.|++.+.||+|+||.||+|+. ..+++.||+|++..... ...+.+.+|+.++++++||||+++++++.. +.
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~ 93 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGID--NRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLK-----DT 93 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEE--TTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEE-----TT
T ss_pred HHHHHHhhhhcccCCeEEEEEEE--CCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec-----CC
Confidence 35688999999999999999984 34678899999976542 345789999999999999999999998643 34
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCc
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGL 316 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 316 (484)
..++||||+++++|.+++.. ..+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+
T Consensus 94 ~~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~ 165 (303)
T 3a7i_A 94 KLWIIMEYLGGGSALDLLEP-----GPLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGV 165 (303)
T ss_dssp EEEEEEECCTTEEHHHHHTT-----SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred eEEEEEEeCCCCcHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChheEEECCCCCEEEeeccc
Confidence 78999999999999999863 35899999999999999999999 88999999999999999999999999999
Q ss_pred ccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcc
Q 011508 317 AKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALP 396 (484)
Q Consensus 317 a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 396 (484)
+....... .......|+..|+|||++.+..++.++||||||+++|+|++|+.||...... .....+.
T Consensus 166 ~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~---- 232 (303)
T 3a7i_A 166 AGQLTDTQ-------IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM--KVLFLIP---- 232 (303)
T ss_dssp CEECBTTB-------CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHH----
T ss_pred ceecCccc-------cccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH--HHHHHhh----
Confidence 98664321 1122346899999999999999999999999999999999999999653211 0000000
Q ss_pred hhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHH
Q 011508 397 ERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQL 463 (484)
Q Consensus 397 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 463 (484)
....+.+ ...++..+.+++..||+.||++|||+.|+++..
T Consensus 233 ----~~~~~~~-----------------------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~ 272 (303)
T 3a7i_A 233 ----KNNPPTL-----------------------EGNYSKPLKEFVEACLNKEPSFRPTAKELLKHK 272 (303)
T ss_dssp ----HSCCCCC-----------------------CSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCH
T ss_pred ----cCCCCCC-----------------------ccccCHHHHHHHHHHcCCChhhCcCHHHHhhCh
Confidence 0000000 112255689999999999999999999998754
No 189
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=4.7e-42 Score=335.95 Aligned_cols=284 Identities=21% Similarity=0.211 Sum_probs=204.2
Q ss_pred cccHHhHHHhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCcc-----------chHHHHHHHHHHHcCC
Q 011508 148 RVSYQNLFKATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRG-----------ASKSFIAECQALRSIR 216 (484)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~-----------~~~~~~~e~~~l~~l~ 216 (484)
+....++....++|.+.+.||+|+||.||+|... .+..||||++...... ..+.+.+|++++++++
T Consensus 11 ~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 87 (362)
T 3pg1_A 11 RDLIAELHAMQSPYTVQRFISSGSYGAVCAGVDS---EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFH 87 (362)
T ss_dssp HHHHHHHHHTTCSCEEEEEEEEETTEEEEEEECT---TSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHhccceEEeEEeccCCCEEEEEEECC---CCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCC
Confidence 3445677888999999999999999999999843 3788999998643321 1267899999999999
Q ss_pred CCCceeEeeeeeeeccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCC
Q 011508 217 HRNLVKIITSCVSVDFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDL 296 (484)
Q Consensus 217 h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl 296 (484)
||||+++++++...+.......++||||++ |+|.+++... ...+++..++.++.|++.||+||| +++|+||||
T Consensus 88 h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dl 160 (362)
T 3pg1_A 88 HPNILGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQ---RIVISPQHIQYFMYHILLGLHVLH---EAGVVHRDL 160 (362)
T ss_dssp CTTBCCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCT---TSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCC
T ss_pred CcCccceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHH---HCcCEecCC
Confidence 999999999986655455567899999996 6888888732 346899999999999999999999 889999999
Q ss_pred CCCCeeecCCCceEEcccCcccccccccccCCCCccccccccccccccCccccCC-CCCCcccceehhhHHHHHHHhCCC
Q 011508 297 KPSNVLLDGELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-SEVSTSGDVYSFGILLLEMFTGKG 375 (484)
Q Consensus 297 k~~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~ 375 (484)
||+||+++.++.+||+|||++....... ......+|..|+|||++.+ ..++.++|||||||++|+|++|+.
T Consensus 161 kp~NIl~~~~~~~kl~Dfg~~~~~~~~~--------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~ 232 (362)
T 3pg1_A 161 HPGNILLADNNDITICDFNLAREDTADA--------NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKA 232 (362)
T ss_dssp CGGGEEECTTCCEEECCTTC-----------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSC
T ss_pred ChHHEEEcCCCCEEEEecCccccccccc--------ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCC
Confidence 9999999999999999999997543221 1223468999999998876 678999999999999999999999
Q ss_pred CCCCCccCCccHhHHHHhhcch-----------hhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhc
Q 011508 376 PTNEMFTGNLTLHNFVKEALPE-----------RLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVI 444 (484)
Q Consensus 376 p~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 444 (484)
||....... .+.......... ...+.+...+........ ......+...+.+++.+
T Consensus 233 pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~li~~ 299 (362)
T 3pg1_A 233 LFRGSTFYN-QLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAW------------TAVVPTADPVALDLIAK 299 (362)
T ss_dssp SCCCSSHHH-HHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCH------------HHHSTTSCHHHHHHHHH
T ss_pred CCCCCCHHH-HHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhH------------HhhCCCCCHHHHHHHHH
Confidence 997642111 111111111000 011111111111000000 00012235678999999
Q ss_pred cCCCCcCCCCCHHHHHHH
Q 011508 445 CSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 445 cl~~dP~~RPt~~evl~~ 462 (484)
||+.||++|||+.|+++.
T Consensus 300 ~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 300 MLEFNPQRRISTEQALRH 317 (362)
T ss_dssp HTCSSGGGSCCHHHHHTS
T ss_pred HhcCChhhCCCHHHHHcC
Confidence 999999999999999863
No 190
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=4.6e-42 Score=325.52 Aligned_cols=264 Identities=28% Similarity=0.384 Sum_probs=196.6
Q ss_pred cCCCCccCccccccceeEEEEEEcCC-CCeeEEEEEEeeccC---ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccC
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHD-DHETLVAVKVLNLQH---RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQ 233 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 233 (484)
.++|++.+.||+|+||.||+|++... +....||+|+++... ....+.+.+|++++++++||||+++++++..
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---- 92 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT---- 92 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS----
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcc----
Confidence 35789999999999999999986533 334579999987542 2344678999999999999999999998632
Q ss_pred CCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcc
Q 011508 234 GNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSD 313 (484)
Q Consensus 234 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~D 313 (484)
+ ..++|+||+++++|.+++.... ..+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|
T Consensus 93 -~-~~~~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~D 164 (291)
T 1u46_A 93 -P-PMKMVTELAPLGSLLDRLRKHQ---GHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGD 164 (291)
T ss_dssp -S-SCEEEEECCTTCBHHHHHHHHG---GGSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECC
T ss_pred -C-CceeeEecccCCCHHHHHHhcc---CCcCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEEcCCCCEEEcc
Confidence 2 3789999999999999997542 35899999999999999999999 89999999999999999999999999
Q ss_pred cCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHH
Q 011508 314 FGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVK 392 (484)
Q Consensus 314 fg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~ 392 (484)
||++......... ........++..|+|||++.+..++.++||||||+++|+|++ |+.||..... .....
T Consensus 165 fg~~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-----~~~~~ 235 (291)
T 1u46_A 165 FGLMRALPQNDDH----YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG-----SQILH 235 (291)
T ss_dssp CTTCEECCC-CCE----EEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH-----HHHHH
T ss_pred ccccccccccccc----hhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCH-----HHHHH
Confidence 9999876433211 111223457888999999988889999999999999999999 9999975321 11111
Q ss_pred hhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHHH
Q 011508 393 EALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRNK 469 (484)
Q Consensus 393 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~ 469 (484)
. +....... ..+..++..+.+++..||+.||++|||+.++++.|+++...
T Consensus 236 ~--------~~~~~~~~-------------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 285 (291)
T 1u46_A 236 K--------IDKEGERL-------------------PRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPT 285 (291)
T ss_dssp H--------HHTSCCCC-------------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred H--------HHccCCCC-------------------CCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCcc
Confidence 1 00000000 00122356789999999999999999999999999887654
No 191
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.4e-42 Score=335.42 Aligned_cols=279 Identities=19% Similarity=0.220 Sum_probs=194.8
Q ss_pred hcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCCCCceeEeeeeeeec-cC
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIRHRNLVKIITSCVSVD-FQ 233 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~ 233 (484)
..++|++.+.||+|+||.||+|+. ..+++.||||++..... ...+.+.+|+++++.++||||+++++++.... ..
T Consensus 23 ~~~~y~~~~~lG~G~~g~V~~a~~--~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~ 100 (367)
T 1cm8_A 23 VRAVYRDLQPVGSGAYGAVCSAVD--GRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLD 100 (367)
T ss_dssp CBSSEEEEEEC------CEEEEEE--TTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTT
T ss_pred ecceEEEeEEeeecCCeEEEEEEE--CCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccc
Confidence 357899999999999999999984 44678999999864332 23467889999999999999999999875432 11
Q ss_pred CCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcc
Q 011508 234 GNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSD 313 (484)
Q Consensus 234 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~D 313 (484)
.....++||||+ +++|.+++.. ..+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|
T Consensus 101 ~~~~~~lv~e~~-~~~L~~~~~~-----~~l~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~D 171 (367)
T 1cm8_A 101 DFTDFYLVMPFM-GTDLGKLMKH-----EKLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILD 171 (367)
T ss_dssp TCCCCEEEEECC-SEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECC
T ss_pred cCceEEEEEecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCHHHEEEcCCCCEEEEe
Confidence 224569999999 8899999974 24899999999999999999999 89999999999999999999999999
Q ss_pred cCcccccccccccCCCCccccccccccccccCccccCC-CCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHH
Q 011508 314 FGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVK 392 (484)
Q Consensus 314 fg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 392 (484)
||+++..... .....+|..|+|||++.+ ..++.++||||+||++|||++|+.||.+..... .+.....
T Consensus 172 fg~a~~~~~~----------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~l~~i~~ 240 (367)
T 1cm8_A 172 FGLARQADSE----------MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLD-QLKEIMK 240 (367)
T ss_dssp CTTCEECCSS----------CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHH
T ss_pred eecccccccc----------cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHH
Confidence 9999865321 123468999999998876 679999999999999999999999997642111 1111111
Q ss_pred hh--cchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 393 EA--LPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 393 ~~--~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
.. .+......+.......... .........-......+...+.+++.+||+.||++|||++|+++
T Consensus 241 ~~g~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~ 307 (367)
T 1cm8_A 241 VTGTPPAEFVQRLQSDEAKNYMK----GLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 307 (367)
T ss_dssp HHCCCCHHHHHTCSCHHHHHHHH----HSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred hcCCCCHHHHHHhhhHHHHHHHH----hCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence 10 0111100000000000000 00000000000001223567899999999999999999999987
No 192
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=2.8e-42 Score=337.30 Aligned_cols=200 Identities=28% Similarity=0.394 Sum_probs=171.6
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCc
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
.++|++.+.||+|+||.||+|... .++..||+|++..... ...+.+.+|+.++++++||||+++++++.. +.
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~ 104 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHK--PSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-----DG 104 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET--TTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEE-----TT
T ss_pred cccceeeeeecCCCCeEEEEEEEC--CCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEE-----CC
Confidence 357899999999999999999954 4578999999976533 334678999999999999999999998643 44
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CeeecCCCCCCeeecCCCceEEcccC
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCET-PIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
..++||||+++++|.+++.... .+++..+..++.|++.||+||| +. +|+||||||+||+++.++.+||+|||
T Consensus 105 ~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~~i~~~l~~lh---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg 177 (360)
T 3eqc_A 105 EISICMEHMDGGSLDQVLKKAG----RIPEQILGKVSIAVIKGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFG 177 (360)
T ss_dssp EEEEEECCCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---HHHCCCCSCCSGGGEEECTTCCEEECCCC
T ss_pred EEEEEEECCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HhCCEEcCCccHHHEEECCCCCEEEEECC
Confidence 7899999999999999997543 4889999999999999999999 64 89999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCC
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEM 380 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~ 380 (484)
++....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 178 ~~~~~~~~~---------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 233 (360)
T 3eqc_A 178 VSGQLIDSM---------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP 233 (360)
T ss_dssp CCHHHHHHC-------------CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCC
T ss_pred CCccccccc---------ccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 987553221 12346899999999999999999999999999999999999999753
No 193
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=4.7e-42 Score=332.10 Aligned_cols=250 Identities=22% Similarity=0.252 Sum_probs=200.9
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCC
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQG 234 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 234 (484)
.++|.+.+.||+|+||.||+++.. .+++.||+|++.... ....+.+.+|+.+++.++||||+++++++. .
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~--~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~ 112 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDA--DTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFE-----D 112 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEET--TTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEE-----C
T ss_pred CCceEEEEEEeeCCCeEEEEEEEC--CCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-----c
Confidence 467899999999999999999954 457889999987543 223467889999999999999999999954 3
Q ss_pred CceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEccc
Q 011508 235 NDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDF 314 (484)
Q Consensus 235 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 314 (484)
++..++||||+++++|.+++... ..+++.+++.++.|++.||+||| +++|+||||||+||+++.++.+||+||
T Consensus 113 ~~~~~lv~e~~~~~~L~~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Df 185 (335)
T 2owb_A 113 NDFVFVVLELCRRRSLLELHKRR----KALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDF 185 (335)
T ss_dssp SSEEEEEECCCTTCBHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCC
T ss_pred CCeEEEEEecCCCCCHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHH---HCCCEecCCCchhEEEcCCCCEEEeec
Confidence 45889999999999999998754 34899999999999999999999 889999999999999999999999999
Q ss_pred CcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhh
Q 011508 315 GLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEA 394 (484)
Q Consensus 315 g~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 394 (484)
|++....... .......|+..|+|||++.+..++.++||||||+++|||++|+.||..... .......
T Consensus 186 g~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~~~~~~~ 253 (335)
T 2owb_A 186 GLATKVEYDG-------ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL-----KETYLRI 253 (335)
T ss_dssp TTCEECCSTT-------CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHHHHH
T ss_pred cCceecccCc-------ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCH-----HHHHHHH
Confidence 9998763221 112234689999999999988899999999999999999999999975321 1111100
Q ss_pred cchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 395 LPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 395 ~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
....... +..+...+.+++.+||+.||++|||+.|+++.
T Consensus 254 --------~~~~~~~---------------------~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 254 --------KKNEYSI---------------------PKHINPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp --------HHTCCCC---------------------CTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred --------hcCCCCC---------------------CccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0000000 11224568899999999999999999999874
No 194
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=7.3e-42 Score=323.55 Aligned_cols=248 Identities=17% Similarity=0.216 Sum_probs=195.9
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcC-CCCCceeEeeeeeeeccCC
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSI-RHRNLVKIITSCVSVDFQG 234 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 234 (484)
.++|++.+.||+|+||.||+|+.. .+++.||+|+++.... .....+.+|+..+..+ +||||+++++++..
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~----- 82 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKR--LDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAE----- 82 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEET--TTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEE-----
T ss_pred cchhhhhhhhcCCCceEEEEEEEc--CCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeec-----
Confidence 467899999999999999999954 4578999999986432 3346788999999999 99999999998643
Q ss_pred CceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecC---------
Q 011508 235 NDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDG--------- 305 (484)
Q Consensus 235 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~--------- 305 (484)
++..++||||+++++|.+++.........+++..++.++.|++.||+||| +++|+||||||+||+++.
T Consensus 83 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~~~~~~ 159 (289)
T 1x8b_A 83 DDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASE 159 (289)
T ss_dssp TTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEC----------
T ss_pred CCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeecCCCHHHEEEcCCCCCccccc
Confidence 44889999999999999999865433356899999999999999999999 899999999999999984
Q ss_pred ----------CCceEEcccCcccccccccccCCCCccccccccccccccCccccCCC-CCCcccceehhhHHHHHHHhCC
Q 011508 306 ----------ELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGS-EVSTSGDVYSFGILLLEMFTGK 374 (484)
Q Consensus 306 ----------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dvws~Gvvl~elltg~ 374 (484)
...+||+|||.+....... ...||..|+|||.+.+. .++.++|||||||++|+|++|.
T Consensus 160 ~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~-----------~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~ 228 (289)
T 1x8b_A 160 EGDEDDWASNKVMFKIGDLGHVTRISSPQ-----------VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAE 228 (289)
T ss_dssp ----------CCCEEECCCTTCEETTCSC-----------CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCC
T ss_pred ccccccccCCceEEEEcccccccccCCcc-----------ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCC
Confidence 4479999999998653221 23489999999998765 6678999999999999999999
Q ss_pred CCCCCCccCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCC
Q 011508 375 GPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERM 454 (484)
Q Consensus 375 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP 454 (484)
+|+... ........ ..... .+..++..+.+++.+||+.||++||
T Consensus 229 ~~~~~~----~~~~~~~~------------~~~~~--------------------~~~~~~~~~~~li~~~l~~dp~~Rp 272 (289)
T 1x8b_A 229 PLPRNG----DQWHEIRQ------------GRLPR--------------------IPQVLSQEFTELLKVMIHPDPERRP 272 (289)
T ss_dssp CCCSSS----HHHHHHHT------------TCCCC--------------------CSSCCCHHHHHHHHHHTCSSGGGSC
T ss_pred CCCcch----hHHHHHHc------------CCCCC--------------------CCcccCHHHHHHHHHHhCCCcccCC
Confidence 876431 11111110 00000 0112256789999999999999999
Q ss_pred CHHHHHHH
Q 011508 455 NMEEVAAQ 462 (484)
Q Consensus 455 t~~evl~~ 462 (484)
|+.|+++.
T Consensus 273 s~~~ll~h 280 (289)
T 1x8b_A 273 SAMALVKH 280 (289)
T ss_dssp CHHHHHTC
T ss_pred CHHHHhhC
Confidence 99999763
No 195
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=7e-42 Score=329.76 Aligned_cols=267 Identities=23% Similarity=0.308 Sum_probs=199.5
Q ss_pred cccHHhHHHhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcC-CCCCceeEeee
Q 011508 148 RVSYQNLFKATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSI-RHRNLVKIITS 226 (484)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~ 226 (484)
.++..++....++|++.+.||+|+||.||+|+.. .+++.||+|++.... ...+.+.+|+.+++++ +||||++++++
T Consensus 13 ~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~ 89 (326)
T 2x7f_A 13 EIDLSALRDPAGIFELVELVGNGTYGQVYKGRHV--KTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGA 89 (326)
T ss_dssp ---CCCCCCCTTTEEEEEEEEEETTEEEEEEEET--TTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEE
T ss_pred hccchhccCCCCcEEEEEEeccCCCEEEEEEEEC--CCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeE
Confidence 3444555567789999999999999999999954 357889999997543 3447889999999999 89999999999
Q ss_pred eeeeccC-CCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecC
Q 011508 227 CVSVDFQ-GNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDG 305 (484)
Q Consensus 227 ~~~~~~~-~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~ 305 (484)
+...... .....++||||+++++|.+++.... ...+++..++.++.|++.||+||| +++|+||||||+||+++.
T Consensus 90 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~ 164 (326)
T 2x7f_A 90 FIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTK--GNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTE 164 (326)
T ss_dssp EEECC--CCCCEEEEEEECCTTEEHHHHHHHSG--GGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECT
T ss_pred EeeccCccccceEEEEEEcCCCCcHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCcHHHEEEcC
Confidence 7653211 1457899999999999999997542 245899999999999999999999 889999999999999999
Q ss_pred CCceEEcccCcccccccccccCCCCccccccccccccccCccccC-----CCCCCcccceehhhHHHHHHHhCCCCCCCC
Q 011508 306 ELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGM-----GSEVSTSGDVYSFGILLLEMFTGKGPTNEM 380 (484)
Q Consensus 306 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dvws~Gvvl~elltg~~p~~~~ 380 (484)
++.+||+|||++....... .......|+..|+|||++. +..++.++|||||||++|+|++|+.||...
T Consensus 165 ~~~~kl~Dfg~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 237 (326)
T 2x7f_A 165 NAEVKLVDFGVSAQLDRTV-------GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDM 237 (326)
T ss_dssp TCCEEECCCTTTC--------------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred CCCEEEeeCcCceecCcCc-------cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCC
Confidence 9999999999988653321 1122346899999999986 567899999999999999999999999653
Q ss_pred ccCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHH
Q 011508 381 FTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVA 460 (484)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl 460 (484)
... ...... .....+.+. ...++..+.+++.+||+.||++|||+.|++
T Consensus 238 ~~~-----~~~~~~-----~~~~~~~~~----------------------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll 285 (326)
T 2x7f_A 238 HPM-----RALFLI-----PRNPAPRLK----------------------SKKWSKKFQSFIESCLVKNHSQRPATEQLM 285 (326)
T ss_dssp CHH-----HHHHHH-----HHSCCCCCS----------------------CSCSCHHHHHHHHHHCCSSGGGSCCHHHHH
T ss_pred cHH-----HHHHHh-----hcCccccCC----------------------ccccCHHHHHHHHHHhccChhhCCCHHHHh
Confidence 211 000000 000000000 112255789999999999999999999998
Q ss_pred H
Q 011508 461 A 461 (484)
Q Consensus 461 ~ 461 (484)
+
T Consensus 286 ~ 286 (326)
T 2x7f_A 286 K 286 (326)
T ss_dssp T
T ss_pred h
Confidence 6
No 196
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=1.6e-41 Score=337.98 Aligned_cols=278 Identities=24% Similarity=0.274 Sum_probs=197.6
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeecc-CCCce
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDF-QGNDF 237 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~-~~~~~ 237 (484)
.+|++.+.||+|+||.||+|+.. .+++.||||++..... ...+|++++++++||||+++++++..... .+..+
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~--~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~ 127 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLC--DSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 127 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEET--TTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEEC--CCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCccee
Confidence 45888899999999999999954 3578899999865432 23479999999999999999998765432 22345
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCC-CceEEcccCc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGE-LTAHVSDFGL 316 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~-~~~kl~Dfg~ 316 (484)
.++||||+++ +|.+.+.........+++..++.++.||+.||+||| +++|+||||||+|||++.+ +.+||+|||+
T Consensus 128 ~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NILl~~~~~~~kl~DFG~ 203 (420)
T 1j1b_A 128 LNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGS 203 (420)
T ss_dssp EEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred EEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChhhEEEeCCCCeEEeccchh
Confidence 6799999965 777776544334456999999999999999999999 8999999999999999965 5789999999
Q ss_pred ccccccccccCCCCccccccccccccccCccccCCC-CCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhc
Q 011508 317 AKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGS-EVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEAL 395 (484)
Q Consensus 317 a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 395 (484)
++.+.... ......||..|+|||++.+. .++.++|||||||++|||++|+.||.+.... ..+.+.+....
T Consensus 204 a~~~~~~~--------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~-~~l~~i~~~lg 274 (420)
T 1j1b_A 204 AKQLVRGE--------PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV-DQLVEIIKVLG 274 (420)
T ss_dssp CEECCTTC--------CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHC
T ss_pred hhhcccCC--------CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhC
Confidence 98763321 12234689999999998764 7899999999999999999999999763211 11222222111
Q ss_pred c---hhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 396 P---ERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 396 ~---~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
. +.+... ++..... . ..... ..++ ........+.++.+|+.+||+.||++|||+.|+++.
T Consensus 275 ~p~~~~~~~~-~~~~~~~-~---~p~~~-~~~~-~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h 337 (420)
T 1j1b_A 275 TPTREQIREM-NPNYTEF-K---FPQIK-AHPW-TKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337 (420)
T ss_dssp SCCHHHHHHH-CSCCCCC-C---CCCCC-CCCH-HHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CCCHHHHHhh-Chhhhhh-c---cCccC-CCCH-HHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence 1 111111 1111000 0 00000 0000 000012235678999999999999999999999853
No 197
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=2e-41 Score=344.17 Aligned_cols=252 Identities=23% Similarity=0.304 Sum_probs=197.7
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC--ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH--RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
.++|++.+.||+|+||+||+|+. ..+++.||||++.... ......+.+|++++++++||||+++++++. ..
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~-----~~ 93 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKD--RITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILE-----DS 93 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEE--TTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEE-----CS
T ss_pred hcceEEeEEEeecCCEEEEEEEE--CCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEE-----cC
Confidence 35689999999999999999984 4467889999986432 234567899999999999999999999853 45
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeec---CCCceEEc
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLD---GELTAHVS 312 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~---~~~~~kl~ 312 (484)
...++||||+++|+|.+++.... .+++..++.++.||+.||+||| +++|+||||||+||+++ .++.+||+
T Consensus 94 ~~~~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~ 166 (486)
T 3mwu_A 94 SSFYIVGELYTGGELFDEIIKRK----RFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKII 166 (486)
T ss_dssp SEEEEEECCCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEESSSSTTCCEEEC
T ss_pred CEEEEEEEcCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEE
Confidence 58899999999999999987543 4899999999999999999999 89999999999999995 45689999
Q ss_pred ccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHH
Q 011508 313 DFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVK 392 (484)
Q Consensus 313 Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 392 (484)
|||++....... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||..... .....
T Consensus 167 Dfg~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~-----~~~~~ 232 (486)
T 3mwu_A 167 DFGLSTCFQQNT--------KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE-----YDILK 232 (486)
T ss_dssp SCSCTTTBCCC------------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHH
T ss_pred ECCcCeECCCCC--------ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHH
Confidence 999998653321 1223469999999999876 589999999999999999999999975321 11111
Q ss_pred hhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 393 EALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 393 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
.. ......... .....++.++.+++.+||+.||++|||+.|+++.
T Consensus 233 ~i--------~~~~~~~~~-----------------~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 233 RV--------ETGKYAFDL-----------------PQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp HH--------HHTCCCSCS-----------------GGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred HH--------HhCCCCCCC-----------------cccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 10 000000000 0012235678999999999999999999999874
No 198
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=6e-42 Score=326.56 Aligned_cols=254 Identities=22% Similarity=0.313 Sum_probs=196.8
Q ss_pred hcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCc
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
..++|++.+.||+|+||.||+|+.. .++..||+|++........+.+.+|+++++.++||||+++++++.. +.
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~ 89 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNK--ETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYH-----DG 89 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEET--TTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----C-
T ss_pred CccceeecceeccCCCeEEEEEEEc--CCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeee-----CC
Confidence 3467999999999999999999954 3578899999987666667889999999999999999999998643 44
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCc
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGL 316 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 316 (484)
..++||||+++++|.+++.... ..+++..++.++.|++.||+||| +.+++||||||+||+++.++.+||+|||+
T Consensus 90 ~~~lv~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 163 (302)
T 2j7t_A 90 KLWIMIEFCPGGAVDAIMLELD---RGLTEPQIQVVCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGV 163 (302)
T ss_dssp CEEEEEECCTTEEHHHHHHHHT---SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCCHH
T ss_pred eEEEEEEeCCCCcHHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEECCCCCEEEEECCC
Confidence 7899999999999999987532 35899999999999999999999 88999999999999999999999999998
Q ss_pred ccccccccccCCCCccccccccccccccCcccc-----CCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHH
Q 011508 317 AKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYG-----MGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFV 391 (484)
Q Consensus 317 a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~-----~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 391 (484)
+....... .......|+..|+|||++ ....++.++||||||+++|+|++|+.||...... ...
T Consensus 164 ~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~~ 231 (302)
T 2j7t_A 164 SAKNLKTL-------QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM-----RVL 231 (302)
T ss_dssp HHHHHHHH-------HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHH-----HHH
T ss_pred Cccccccc-------cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHH-----HHH
Confidence 76432211 111234689999999987 4677899999999999999999999999753211 111
Q ss_pred HhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 392 KEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 392 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
.... ....+.. ..+..++..+.+++..||+.||++|||+.|+++
T Consensus 232 ~~~~-----~~~~~~~---------------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 232 LKIA-----KSDPPTL---------------------LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp HHHH-----HSCCCCC---------------------SSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred HHHh-----ccCCccc---------------------CCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 1000 0000000 002233567899999999999999999999985
No 199
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=9.2e-42 Score=328.92 Aligned_cols=264 Identities=18% Similarity=0.212 Sum_probs=201.3
Q ss_pred ccHHhHHHhcCCCCcc-CccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcC-CCCCceeEe
Q 011508 149 VSYQNLFKATDGFSLE-NLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSI-RHRNLVKII 224 (484)
Q Consensus 149 ~~~~~~~~~~~~~~~~-~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l-~h~niv~~~ 224 (484)
+.++......+.|.+. +.||+|+||.||+|+.. .+++.||+|++..... .....+.+|+.++.++ .||||++++
T Consensus 18 ~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~ 95 (327)
T 3lm5_A 18 LYFQSMENFNNFYILTSKELGRGKFAVVRQCISK--STGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLH 95 (327)
T ss_dssp CCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEET--TTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEE
T ss_pred hHHHHHHhhhhEEeeccceeCCCCCeEEEEEEEC--CCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEE
Confidence 3334444555677777 88999999999999854 4578999999875432 3356789999999999 569999999
Q ss_pred eeeeeeccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeec
Q 011508 225 TSCVSVDFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLD 304 (484)
Q Consensus 225 ~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~ 304 (484)
+++ ......++||||+++|+|.+++... ....+++..++.++.|++.||+||| +++|+||||||+||+++
T Consensus 96 ~~~-----~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~i~~ql~~~L~~LH---~~givH~Dikp~NIl~~ 165 (327)
T 3lm5_A 96 EVY-----ENTSEIILILEYAAGGEIFSLCLPE--LAEMVSENDVIRLIKQILEGVYYLH---QNNIVHLDLKPQNILLS 165 (327)
T ss_dssp EEE-----ECSSEEEEEEECCTTEEGGGGGSSC--C-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEES
T ss_pred EEE-----EeCCeEEEEEEecCCCcHHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCChHHEEEe
Confidence 985 3455789999999999999998632 2346899999999999999999999 89999999999999998
Q ss_pred C---CCceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCc
Q 011508 305 G---ELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMF 381 (484)
Q Consensus 305 ~---~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~ 381 (484)
. ++.+||+|||++....... ......||+.|+|||++.+..++.++||||||+++|||++|+.||....
T Consensus 166 ~~~~~~~~kL~Dfg~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~ 237 (327)
T 3lm5_A 166 SIYPLGDIKIVDFGMSRKIGHAC--------ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGED 237 (327)
T ss_dssp CBTTBCCEEECCGGGCEEC-----------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cCCCCCcEEEeeCccccccCCcc--------ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 7 7899999999998764321 1123468999999999999999999999999999999999999996532
Q ss_pred cCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 382 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
... .... +.... ..... .....+...+.+++..||+.||++|||++|+++
T Consensus 238 ~~~-----~~~~-----i~~~~-~~~~~-------------------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 238 NQE-----TYLN-----ISQVN-VDYSE-------------------ETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp HHH-----HHHH-----HHHTC-CCCCT-------------------TTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred chH-----HHHH-----HHhcc-cccCc-------------------hhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence 110 0000 00000 00000 001223567889999999999999999999986
Q ss_pred H
Q 011508 462 Q 462 (484)
Q Consensus 462 ~ 462 (484)
.
T Consensus 288 h 288 (327)
T 3lm5_A 288 H 288 (327)
T ss_dssp C
T ss_pred C
Confidence 4
No 200
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=1.4e-41 Score=319.76 Aligned_cols=249 Identities=25% Similarity=0.364 Sum_probs=192.0
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCC
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQG 234 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 234 (484)
.++|.+.+.||+|+||.||+|+.. .+++.||+|++.... ....+.+.+|+.+++.++||||+++++++. .
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~ 82 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQ--LTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVIS-----T 82 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEET--TTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEE-----C
T ss_pred eccEEEEeeecCCCCeEEEEEEEC--CCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEe-----c
Confidence 467999999999999999999854 357889999987532 233467889999999999999999999854 3
Q ss_pred CceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEccc
Q 011508 235 NDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDF 314 (484)
Q Consensus 235 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 314 (484)
....++||||+++++|.+++.... .+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+||
T Consensus 83 ~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~df 155 (276)
T 2h6d_A 83 PTDFFMVMEYVSGGELFDYICKHG----RVEEMEARRLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADF 155 (276)
T ss_dssp SSEEEEEEECCCSCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHH---HHCSSCCCCCGGGEEECTTSCEEECCC
T ss_pred CCeEEEEEeccCCCcHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChhhEEECCCCCEEEeec
Confidence 458899999999999999997543 4899999999999999999999 889999999999999999999999999
Q ss_pred CcccccccccccCCCCccccccccccccccCccccCCCCC-CcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHh
Q 011508 315 GLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEV-STSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKE 393 (484)
Q Consensus 315 g~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 393 (484)
|++....... ......+++.|+|||.+.+..+ +.++||||||+++|+|++|+.||..... ......
T Consensus 156 g~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-----~~~~~~ 222 (276)
T 2h6d_A 156 GLSNMMSDGE--------FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV-----PTLFKK 222 (276)
T ss_dssp CGGGCCCC---------------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHH
T ss_pred ccccccCCCc--------ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcH-----HHHHHH
Confidence 9998653321 1123458999999999887765 6899999999999999999999965311 111110
Q ss_pred hcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 394 ALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 394 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
. .. .... .+..+...+.+++.+||+.||++|||+.|+++.
T Consensus 223 ~-----~~---~~~~---------------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 223 I-----RG---GVFY---------------------IPEYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp H-----HH---CCCC---------------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred h-----hc---Cccc---------------------CchhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 0 00 0000 011224568899999999999999999999874
No 201
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-41 Score=331.13 Aligned_cols=279 Identities=22% Similarity=0.237 Sum_probs=194.3
Q ss_pred HhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCcc-----chHHHHHHHHHHHcCCCCCceeEeeeeeee
Q 011508 156 KATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRG-----ASKSFIAECQALRSIRHRNLVKIITSCVSV 230 (484)
Q Consensus 156 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~ 230 (484)
...++|.+.+.||+|+||.||+|+ +..+++.||+|++...... ..+.+.+|++++++++||||+++++++
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~--~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~--- 81 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKAR--DKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAF--- 81 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEE--CSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEE---
T ss_pred HHhcccEEEeEEeecCCEEEEEEE--ECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEE---
Confidence 345789999999999999999998 4446789999998753321 124688999999999999999999985
Q ss_pred ccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceE
Q 011508 231 DFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAH 310 (484)
Q Consensus 231 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~k 310 (484)
......++||||+++ +|.+++... ...+++..++.++.|++.||+||| +++|+||||||+||+++.++.+|
T Consensus 82 --~~~~~~~lv~e~~~~-~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~k 152 (346)
T 1ua2_A 82 --GHKSNISLVFDFMET-DLEVIIKDN---SLVLTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLK 152 (346)
T ss_dssp --CCTTCCEEEEECCSE-EHHHHHTTC---CSSCCSSHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEE
T ss_pred --eeCCceEEEEEcCCC-CHHHHHHhc---CcCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCCHHHEEEcCCCCEE
Confidence 345578999999965 899888643 345888899999999999999999 89999999999999999999999
Q ss_pred EcccCcccccccccccCCCCccccccccccccccCccccCCC-CCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhH
Q 011508 311 VSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGS-EVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHN 389 (484)
Q Consensus 311 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~ 389 (484)
|+|||+++...... .......+|+.|+|||++.+. .++.++|||||||++|||++|..||...... ..+..
T Consensus 153 l~Dfg~a~~~~~~~-------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~-~~~~~ 224 (346)
T 1ua2_A 153 LADFGLAKSFGSPN-------RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDL-DQLTR 224 (346)
T ss_dssp ECCCGGGSTTTSCC-------CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHH
T ss_pred EEecccceeccCCc-------ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHH-HHHHH
Confidence 99999998663321 122234689999999998664 5899999999999999999999998753211 11111
Q ss_pred HHHhhcchhhhhhcCccccccc-ccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 390 FVKEALPERLAEIVDPVLLVER-EEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 390 ~~~~~~~~~~~~~~d~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
............+.+..-..+. .......... ......+..++.+++.+||+.||++|||+.|+++.
T Consensus 225 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 225 IFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPL------HHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp HHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCH------HHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred HHHHcCCCChhhhhhhccCcccccccccCCCCh------HHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 1111100000000000000000 0000000000 00012235679999999999999999999999864
No 202
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=8.6e-42 Score=338.96 Aligned_cols=208 Identities=23% Similarity=0.333 Sum_probs=157.8
Q ss_pred CCCc-cCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCcee
Q 011508 160 GFSL-ENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGNDFE 238 (484)
Q Consensus 160 ~~~~-~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 238 (484)
.|.+ .++||+|+||.||+|+..+..++..||+|++.... ....+.+|+.+|++++||||+++++++.. ..+...
T Consensus 21 ~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~---~~~~~~ 95 (405)
T 3rgf_A 21 LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLS---HADRKV 95 (405)
T ss_dssp HEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEE---TTTTEE
T ss_pred hhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEec---CCCCeE
Confidence 3555 45899999999999997766677899999996442 34678899999999999999999998743 335678
Q ss_pred eEEeecccCCCHHHHHhhcC-----CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeee----cCCCce
Q 011508 239 ALVYELMVNGSLEEWLHLNR-----DAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLL----DGELTA 309 (484)
Q Consensus 239 ~lv~e~~~~gsL~~~l~~~~-----~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll----~~~~~~ 309 (484)
++||||+. ++|.+++.... .....+++..++.++.||+.||+||| +++|+||||||+|||+ +.++.+
T Consensus 96 ~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~ 171 (405)
T 3rgf_A 96 WLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRV 171 (405)
T ss_dssp EEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECCSSTTTTCE
T ss_pred EEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeCCCcCHHHeEEecCCCCCCcE
Confidence 99999995 68888876322 12234899999999999999999999 8999999999999999 677899
Q ss_pred EEcccCcccccccccccCCCCccccccccccccccCccccCC-CCCCcccceehhhHHHHHHHhCCCCCCCC
Q 011508 310 HVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-SEVSTSGDVYSFGILLLEMFTGKGPTNEM 380 (484)
Q Consensus 310 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~ 380 (484)
||+|||+++....... .........||+.|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 172 kl~Dfg~a~~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 239 (405)
T 3rgf_A 172 KIADMGFARLFNSPLK----PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 239 (405)
T ss_dssp EECCTTCCC--------------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCC
T ss_pred EEEECCCceecCCCCc----ccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCc
Confidence 9999999987643211 1112234568999999999877 45899999999999999999999999754
No 203
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=5.3e-42 Score=331.25 Aligned_cols=273 Identities=25% Similarity=0.322 Sum_probs=196.8
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccc--hHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGA--SKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
.++|++.+.||+|+||.||+|+.. .+++.||+|++....... .+.+.+|+.++++++||||+++++++. ..
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~ 96 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNK--DTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCK-----KK 96 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEET--TTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-----ET
T ss_pred hhhheeeeEEeecCCEEEEEEEEC--CCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEee-----cC
Confidence 467999999999999999999954 457889999986544322 356789999999999999999999964 34
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
...++||||+++++|.+++.. ...+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||
T Consensus 97 ~~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg 169 (331)
T 4aaa_A 97 KRWYLVFEFVDHTILDDLELF----PNGLDYQVVQKYLFQIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFG 169 (331)
T ss_dssp TEEEEEEECCSEEHHHHHHHS----TTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCT
T ss_pred CEEEEEEecCCcchHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHH---HCCEEccCcChheEEEcCCCcEEEEeCC
Confidence 578999999999999887653 235899999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccCCCCccccccccccccccCccccCCC-CCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhh
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGS-EVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEA 394 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 394 (484)
++....... .......|+..|+|||++.+. .++.++|||||||++|+|++|+.||....... .+.......
T Consensus 170 ~~~~~~~~~-------~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~ 241 (331)
T 4aaa_A 170 FARTLAAPG-------EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDID-QLYHIMMCL 241 (331)
T ss_dssp TC-------------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHH
T ss_pred CceeecCCc-------cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHh
Confidence 997653321 112234689999999998775 78999999999999999999999997642211 111111100
Q ss_pred --cchhhhhhc------CcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 395 --LPERLAEIV------DPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 395 --~~~~~~~~~------d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
..+...... +........... ........++..+.+++.+||+.||++|||+.|+++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 242 GNLIPRHQELFNKNPVFAGVRLPEIKERE----------PLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp CSCCHHHHHHHHHCGGGTTCCCCCCSSCC----------CHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred CCCChhhhhHhhhccccccccCccccccc----------hhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 000000000 000000000000 0000012346779999999999999999999999864
No 204
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=1.9e-41 Score=355.48 Aligned_cols=250 Identities=24% Similarity=0.300 Sum_probs=200.9
Q ss_pred hcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeecc---CccchHHHHHHHHHHHcC-CCCCceeEeeeeeeecc
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQ---HRGASKSFIAECQALRSI-RHRNLVKIITSCVSVDF 232 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 232 (484)
..++|++.+.||+|+||.||+|+.. .+++.||||+++.. .....+.+..|..++..+ +||+|++++++ +
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~--~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~-----~ 411 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERK--GTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSC-----F 411 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEES--SSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEE-----C
T ss_pred cccceEEEEEEccCCCEEEEEEEEC--CCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEE-----E
Confidence 3467999999999999999999954 46788999999753 233456788999999988 79999999988 4
Q ss_pred CCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEc
Q 011508 233 QGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVS 312 (484)
Q Consensus 233 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~ 312 (484)
...+..++||||+++|+|.++++... .+++..++.++.||+.||+||| +++|+||||||+|||++.++.+||+
T Consensus 412 ~~~~~~~lV~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH---~~gIiHrDLKp~NILl~~~g~ikL~ 484 (674)
T 3pfq_A 412 QTMDRLYFVMEYVNGGDLMYHIQQVG----RFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIA 484 (674)
T ss_dssp BCSSEEEEEEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---HTSEECCCCCSTTEEECSSSCEEEC
T ss_pred EeCCEEEEEEeCcCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---hCCeEeccCChhhEEEcCCCcEEEe
Confidence 55668999999999999999998543 4899999999999999999999 8999999999999999999999999
Q ss_pred ccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHH
Q 011508 313 DFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVK 392 (484)
Q Consensus 313 Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 392 (484)
|||+++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+...
T Consensus 485 DFGla~~~~~~~-------~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~-----~~~~~ 552 (674)
T 3pfq_A 485 DFGMCKENIWDG-------VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-----DELFQ 552 (674)
T ss_dssp CCTTCEECCCTT-------CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHH
T ss_pred ecceeeccccCC-------cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH-----HHHHH
Confidence 999998542221 123346799999999999999999999999999999999999999976321 11111
Q ss_pred hhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCH-----HHHHH
Q 011508 393 EALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNM-----EEVAA 461 (484)
Q Consensus 393 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~-----~evl~ 461 (484)
.+....+.. +.....++.+|+..||+.||++||++ +||++
T Consensus 553 --------~i~~~~~~~---------------------p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 553 --------SIMEHNVAY---------------------PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp --------HHHSSCCCC---------------------CTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred --------HHHhCCCCC---------------------CccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 111111110 11225678999999999999999998 66653
No 205
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=1.6e-41 Score=332.95 Aligned_cols=284 Identities=19% Similarity=0.185 Sum_probs=193.6
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCCCCceeEeeeeeeec-cCC
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIRHRNLVKIITSCVSVD-FQG 234 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~~ 234 (484)
.++|++.+.||+|+||.||+|+. ..+++.||||++..... ...+.+.+|+.+++.++||||+++++++.... ...
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 101 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYD--AILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE 101 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEE--TTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTT
T ss_pred hhheeEeeeeEecCCEEEEEEEE--CCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccc
Confidence 46899999999999999999984 44678899999975432 23457889999999999999999999865432 122
Q ss_pred CceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEccc
Q 011508 235 NDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDF 314 (484)
Q Consensus 235 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 314 (484)
....++||||++ ++|.+++. ..+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+||
T Consensus 102 ~~~~~lv~e~~~-~~l~~~~~------~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Df 171 (371)
T 2xrw_A 102 FQDVYIVMELMD-ANLCQVIQ------MELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDF 171 (371)
T ss_dssp CCEEEEEEECCS-EEHHHHHH------SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCC
T ss_pred ccceEEEEEcCC-CCHHHHHh------hccCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEEEe
Confidence 347899999995 57888885 23889999999999999999999 899999999999999999999999999
Q ss_pred CcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhh
Q 011508 315 GLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEA 394 (484)
Q Consensus 315 g~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~ 394 (484)
|+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....... .+.......
T Consensus 172 g~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~ 242 (371)
T 2xrw_A 172 GLARTAGTSF--------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID-QWNKVIEQL 242 (371)
T ss_dssp CC------------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHC-C
T ss_pred eccccccccc--------ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHh
Confidence 9998653221 1223568999999999999999999999999999999999999997642110 111111100
Q ss_pred cc--hhhhhhcCccccc----ccccccchhh---hhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 395 LP--ERLAEIVDPVLLV----EREEGETSEA---NAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 395 ~~--~~~~~~~d~~l~~----~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
.. ......+.+.+.. .+........ ..............+..++.+|+.+||+.||++|||++|+++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 243 GTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp CCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred CCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 00 0000000000000 0000000000 0000000000122346789999999999999999999999874
No 206
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=2.4e-42 Score=329.46 Aligned_cols=269 Identities=26% Similarity=0.347 Sum_probs=183.5
Q ss_pred HhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC-ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCC
Q 011508 156 KATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH-RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQG 234 (484)
Q Consensus 156 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 234 (484)
...++|.+.+.||+|+||.||+|+ +..+++.||||++.... ....+.+.+|+.++++++||||+++++++. .
T Consensus 12 i~~~~y~~~~~lg~G~~g~V~~~~--~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~ 84 (303)
T 2vwi_A 12 INRDDYELQEVIGSGATAVVQAAY--CAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFV-----V 84 (303)
T ss_dssp -CCCCCEEEEECC---CCCEEEEE--C----CEEEEECCC----------------CCCCCCCTTBCCEEEEEE-----S
T ss_pred cchhhhhhhheeccccceEEEEEE--ECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEe-----e
Confidence 345789999999999999999998 44457889999986543 233467889999999999999999999864 3
Q ss_pred CceeeEEeecccCCCHHHHHhhcC----CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceE
Q 011508 235 NDFEALVYELMVNGSLEEWLHLNR----DAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAH 310 (484)
Q Consensus 235 ~~~~~lv~e~~~~gsL~~~l~~~~----~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~k 310 (484)
.+..++||||+++++|.+++.... .....+++..++.++.|++.||+||| +++|+||||||+||+++.++.+|
T Consensus 85 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~k 161 (303)
T 2vwi_A 85 KDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQ 161 (303)
T ss_dssp SSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEE
T ss_pred cCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCCChhhEEEcCCCCEE
Confidence 447899999999999999987421 12345899999999999999999999 88999999999999999999999
Q ss_pred EcccCcccccccccccCCCCccccccccccccccCccccCC-CCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhH
Q 011508 311 VSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHN 389 (484)
Q Consensus 311 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~ 389 (484)
|+|||.+.......... .........||+.|+|||++.+ ..++.++||||||+++|||++|+.||........ ...
T Consensus 162 l~dfg~~~~~~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~ 238 (303)
T 2vwi_A 162 IADFGVSAFLATGGDIT--RNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV-LML 238 (303)
T ss_dssp ECCCHHHHHCC-----------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGH-HHH
T ss_pred EEeccchheeccCCCcc--chhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhH-HHH
Confidence 99999987664322110 1111233568999999998765 5689999999999999999999999976422111 000
Q ss_pred HHHhhcchhhh-hhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 390 FVKEALPERLA-EIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 390 ~~~~~~~~~~~-~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
.... .+.... ...++.. ...++..+.+++.+||+.||++|||+.|+++
T Consensus 239 ~~~~-~~~~~~~~~~~~~~-----------------------~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 239 TLQN-DPPSLETGVQDKEM-----------------------LKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp HHTS-SCCCTTC-----CC-----------------------CCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred Hhcc-CCCccccccccchh-----------------------hhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 0000 000000 0000000 1122557889999999999999999999986
No 207
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=2.2e-41 Score=344.36 Aligned_cols=251 Identities=21% Similarity=0.272 Sum_probs=193.7
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC--ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCc
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH--RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
++|++.+.||+|+||+||+|+. ..++..||+|++.... ......+.+|+.+++.++||||+++++++. ...
T Consensus 37 ~~y~~~~~lG~G~~g~V~~~~~--~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~-----~~~ 109 (494)
T 3lij_A 37 EMYQRVKKLGSGAYGEVLLCRD--KVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFE-----DKR 109 (494)
T ss_dssp HHEEEEEEEECC---EEEEEEE--TTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEE-----CSS
T ss_pred cCeEEeeEEecCCCEEEEEEEE--CCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEE-----eCC
Confidence 4689999999999999999994 4467889999997543 233567899999999999999999999964 455
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCC---CceEEcc
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGE---LTAHVSD 313 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~---~~~kl~D 313 (484)
..++||||+++|+|.+++.... .+++..++.++.||+.||+||| +++|+||||||+||+++.+ +.+||+|
T Consensus 110 ~~~lv~e~~~~g~L~~~~~~~~----~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~D 182 (494)
T 3lij_A 110 NYYLVMECYKGGELFDEIIHRM----KFNEVDAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVD 182 (494)
T ss_dssp EEEEEEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECC
T ss_pred EEEEEEecCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChhhEEEeCCCCCCcEEEEE
Confidence 8899999999999999887543 4899999999999999999999 8999999999999999764 4599999
Q ss_pred cCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHh
Q 011508 314 FGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKE 393 (484)
Q Consensus 314 fg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 393 (484)
||++....... ......||+.|+|||++. ..++.++||||+||++|+|++|+.||...... .....
T Consensus 183 fG~a~~~~~~~--------~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-----~~~~~ 248 (494)
T 3lij_A 183 FGLSAVFENQK--------KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQ-----EILRK 248 (494)
T ss_dssp CTTCEECBTTB--------CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHHH
T ss_pred CCCCeECCCCc--------cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHH
Confidence 99998764321 122356999999999876 46999999999999999999999999763211 11111
Q ss_pred hcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 394 ALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 394 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
.. ........ .....++..+.+++.+||+.||++|||+.|+++.
T Consensus 249 i~--------~~~~~~~~-----------------~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 249 VE--------KGKYTFDS-----------------PEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp HH--------HTCCCCCS-----------------GGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred HH--------hCCCCCCc-----------------hhcccCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 00 00000000 0011235678899999999999999999999864
No 208
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=1e-41 Score=346.31 Aligned_cols=251 Identities=25% Similarity=0.332 Sum_probs=199.2
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC---ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH---RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
++|++.+.||+|+||.||+|+. ..+++.||||++.... ....+.+.+|+.++++++||||+++++++. ..
T Consensus 26 ~~y~~~~~lg~G~~g~V~~~~~--~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~-----~~ 98 (484)
T 3nyv_A 26 DRYKGQRVLGKGSFGEVILCKD--KITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFE-----DK 98 (484)
T ss_dssp HHEEEEEEEEEETTEEEEEEEE--TTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEE-----CS
T ss_pred CceEEeeEEecCCCEEEEEEEE--CCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEE-----eC
Confidence 5689999999999999999984 4467899999997543 234577999999999999999999999953 45
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeee---cCCCceEEc
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLL---DGELTAHVS 312 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll---~~~~~~kl~ 312 (484)
...++||||+.+|+|.+++... ..+++..++.++.|++.||+||| +++|+||||||+||++ +.++.+||+
T Consensus 99 ~~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~ 171 (484)
T 3nyv_A 99 GYFYLVGEVYTGGELFDEIISR----KRFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRII 171 (484)
T ss_dssp SEEEEEECCCCSCBHHHHHHTC----SCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSTTCCEEEC
T ss_pred CEEEEEEecCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEecCCCCCcEEEE
Confidence 5889999999999999998743 35899999999999999999999 8999999999999999 567899999
Q ss_pred ccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHH
Q 011508 313 DFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVK 392 (484)
Q Consensus 313 Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 392 (484)
|||++....... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||...... ....
T Consensus 172 Dfg~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-----~~~~ 237 (484)
T 3nyv_A 172 DFGLSTHFEASK--------KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEY-----DILK 237 (484)
T ss_dssp CTTHHHHBCCCC--------SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHH
T ss_pred eeeeeEEccccc--------ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHH-----HHHH
Confidence 999998653221 1223469999999999876 6899999999999999999999999763211 1111
Q ss_pred hhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 393 EALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 393 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
.. ......... .....++.++.+++.+||+.||++|||+.|+++.
T Consensus 238 ~i--------~~~~~~~~~-----------------~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 238 KV--------EKGKYTFEL-----------------PQWKKVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp HH--------HHCCCCCCS-----------------GGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HH--------HcCCCCCCC-----------------cccccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 10 000000000 0012235678999999999999999999999864
No 209
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=4.8e-41 Score=328.55 Aligned_cols=255 Identities=23% Similarity=0.334 Sum_probs=198.8
Q ss_pred HHhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCcc--------chHHHHHHHHHHHcC-CCCCceeEee
Q 011508 155 FKATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRG--------ASKSFIAECQALRSI-RHRNLVKIIT 225 (484)
Q Consensus 155 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~e~~~l~~l-~h~niv~~~~ 225 (484)
....++|.+.+.||+|+||.||+|+.. .+++.||||++...... ..+.+.+|+.+++++ +||||+++++
T Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~a~~~--~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~ 167 (365)
T 2y7j_A 90 KEFYQKYDPKDVIGRGVSSVVRRCVHR--ATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLID 167 (365)
T ss_dssp HHHHHHEEEEEEEEECSSEEEEEEEET--TTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEE
T ss_pred hhhhhhcccceEEecCCCEEEEEEEEC--CCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEE
Confidence 344567999999999999999999954 35788999999755421 134678999999999 8999999999
Q ss_pred eeeeeccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecC
Q 011508 226 SCVSVDFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDG 305 (484)
Q Consensus 226 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~ 305 (484)
++. .....++||||+++++|.+++... ..+++..+..++.||+.||.||| +.+|+||||||+||+++.
T Consensus 168 ~~~-----~~~~~~lv~e~~~g~~L~~~l~~~----~~l~~~~~~~i~~qi~~~L~~LH---~~gi~H~Dlkp~NIl~~~ 235 (365)
T 2y7j_A 168 SYE-----SSSFMFLVFDLMRKGELFDYLTEK----VALSEKETRSIMRSLLEAVSFLH---ANNIVHRDLKPENILLDD 235 (365)
T ss_dssp EEE-----BSSEEEEEECCCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECT
T ss_pred EEe-----eCCEEEEEEEeCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECC
Confidence 853 345889999999999999999753 34899999999999999999999 889999999999999999
Q ss_pred CCceEEcccCcccccccccccCCCCccccccccccccccCccccC------CCCCCcccceehhhHHHHHHHhCCCCCCC
Q 011508 306 ELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGM------GSEVSTSGDVYSFGILLLEMFTGKGPTNE 379 (484)
Q Consensus 306 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~------~~~~~~~~Dvws~Gvvl~elltg~~p~~~ 379 (484)
++.+||+|||++..+.... ......||+.|+|||++. ...++.++|||||||++|||++|+.||..
T Consensus 236 ~~~ikl~DfG~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~ 307 (365)
T 2y7j_A 236 NMQIRLSDFGFSCHLEPGE--------KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWH 307 (365)
T ss_dssp TCCEEECCCTTCEECCTTC--------CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CCCEEEEecCcccccCCCc--------ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCC
Confidence 9999999999998764321 122356899999999875 33588999999999999999999999965
Q ss_pred CccCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHH
Q 011508 380 MFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEV 459 (484)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev 459 (484)
.... .....+.. ....... + ....++..+.+++.+||+.||++|||+.|+
T Consensus 308 ~~~~--~~~~~i~~-----------~~~~~~~------------~-----~~~~~~~~~~~li~~~L~~dP~~Rps~~el 357 (365)
T 2y7j_A 308 RRQI--LMLRMIME-----------GQYQFSS------------P-----EWDDRSSTVKDLISRLLQVDPEARLTAEQA 357 (365)
T ss_dssp SSHH--HHHHHHHH-----------TCCCCCH------------H-----HHSSSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred CCHH--HHHHHHHh-----------CCCCCCC------------c-----ccccCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence 3110 01000000 0000000 0 011225568899999999999999999999
Q ss_pred HH
Q 011508 460 AA 461 (484)
Q Consensus 460 l~ 461 (484)
++
T Consensus 358 l~ 359 (365)
T 2y7j_A 358 LQ 359 (365)
T ss_dssp HH
T ss_pred hc
Confidence 86
No 210
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=2.3e-41 Score=335.19 Aligned_cols=284 Identities=19% Similarity=0.234 Sum_probs=201.5
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCC--------CCCceeEeeeeee
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIR--------HRNLVKIITSCVS 229 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~--------h~niv~~~~~~~~ 229 (484)
.++|++.+.||+|+||+||+|+. ..+++.||||+++.. ....+.+.+|+.+++.++ |+||+++++++..
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~ 112 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWD--IQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKI 112 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEE--TTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEe--cCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceee
Confidence 36799999999999999999984 446789999999743 233467889999999985 7889999998754
Q ss_pred eccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CeeecCCCCCCeeecCCC-
Q 011508 230 VDFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCET-PIVHCDLKPSNVLLDGEL- 307 (484)
Q Consensus 230 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~dlk~~NIll~~~~- 307 (484)
.. ......++||||+ +++|.+++.... ...+++..++.++.||+.||+||| ++ +|+||||||+|||++.++
T Consensus 113 ~~-~~~~~~~lv~e~~-~~~l~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~lH---~~~givHrDikp~NIll~~~~~ 185 (397)
T 1wak_A 113 SG-VNGTHICMVFEVL-GHHLLKWIIKSN--YQGLPLPCVKKIIQQVLQGLDYLH---TKCRIIHTDIKPENILLSVNEQ 185 (397)
T ss_dssp EE-TTEEEEEEEECCC-CCBHHHHHHHTT--TSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECCCCSGGGEEECCCHH
T ss_pred cC-CCCceEEEEEecc-CccHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHeeEeccch
Confidence 32 2455789999999 677777775432 245899999999999999999999 77 999999999999998775
Q ss_pred ------------------------------------------------ceEEcccCcccccccccccCCCCccccccccc
Q 011508 308 ------------------------------------------------TAHVSDFGLAKFLPEAANNLSSNQSSSVGVKG 339 (484)
Q Consensus 308 ------------------------------------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g 339 (484)
.+||+|||.+...... .....|
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----------~~~~~g 255 (397)
T 1wak_A 186 YIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----------FTEDIQ 255 (397)
T ss_dssp HHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----------SCSCCS
T ss_pred hhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----------CccCCC
Confidence 7999999999865322 122468
Q ss_pred cccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccH-----hHHHH--hhcchhhh-------hhcCc
Q 011508 340 TVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTL-----HNFVK--EALPERLA-------EIVDP 405 (484)
Q Consensus 340 ~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~-----~~~~~--~~~~~~~~-------~~~d~ 405 (484)
|..|+|||++.+..++.++|||||||++|||+||+.||.......... ..... ...+.... +....
T Consensus 256 t~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 335 (397)
T 1wak_A 256 TRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTK 335 (397)
T ss_dssp CGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCT
T ss_pred CCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCC
Confidence 999999999999899999999999999999999999997644332111 00100 00011000 00000
Q ss_pred ccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 406 VLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 406 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
.-.......................+.++...+.+|+.+||+.||++|||++|+++
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 336 KGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp TSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred ccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 00000000000000000000001113455788999999999999999999999985
No 211
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=3.4e-41 Score=343.88 Aligned_cols=253 Identities=22% Similarity=0.291 Sum_probs=196.7
Q ss_pred hcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc-------------cchHHHHHHHHHHHcCCCCCceeE
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR-------------GASKSFIAECQALRSIRHRNLVKI 223 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-------------~~~~~~~~e~~~l~~l~h~niv~~ 223 (484)
..++|.+.+.||+|+||+||+|+.. .++..||+|++..... ...+.+.+|+.++++++||||+++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~ 111 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEK--NGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKL 111 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEET--TTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCE
T ss_pred cccceEEEeEecccCCeEEEEEEEC--CCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeE
Confidence 3467999999999999999999944 4678899999875431 234678899999999999999999
Q ss_pred eeeeeeeccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeee
Q 011508 224 ITSCVSVDFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLL 303 (484)
Q Consensus 224 ~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll 303 (484)
++++. .....++||||+++|+|.+++.... .+++..++.++.||+.||+||| +++|+||||||+||++
T Consensus 112 ~~~~~-----~~~~~~lv~e~~~gg~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~ 179 (504)
T 3q5i_A 112 FDVFE-----DKKYFYLVTEFYEGGELFEQIINRH----KFDECDAANIMKQILSGICYLH---KHNIVHRDIKPENILL 179 (504)
T ss_dssp EEEEE-----CSSEEEEEEECCTTCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEE
T ss_pred EEEEE-----cCCEEEEEEecCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCcHHHEEE
Confidence 99953 4558899999999999999987543 4899999999999999999999 8999999999999999
Q ss_pred cCCC---ceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCC
Q 011508 304 DGEL---TAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEM 380 (484)
Q Consensus 304 ~~~~---~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~ 380 (484)
+.++ .+||+|||++....... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||...
T Consensus 180 ~~~~~~~~~kl~Dfg~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~ 250 (504)
T 3q5i_A 180 ENKNSLLNIKIVDFGLSSFFSKDY--------KLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQ 250 (504)
T ss_dssp SSTTCCSSEEECCCTTCEECCTTS--------CBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ecCCCCccEEEEECCCCEEcCCCC--------ccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCC
Confidence 8775 69999999998764321 1223469999999999874 6899999999999999999999999763
Q ss_pred ccCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHH
Q 011508 381 FTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVA 460 (484)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl 460 (484)
... ...... .......... ....++.++.+++..||+.||.+|||++|++
T Consensus 251 ~~~-----~~~~~i--------~~~~~~~~~~-----------------~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l 300 (504)
T 3q5i_A 251 NDQ-----DIIKKV--------EKGKYYFDFN-----------------DWKNISDEAKELIKLMLTYDYNKRCTAEEAL 300 (504)
T ss_dssp SHH-----HHHHHH--------HHCCCCCCHH-----------------HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred CHH-----HHHHHH--------HcCCCCCCcc-----------------ccCCCCHHHHHHHHHHcCCChhHCCCHHHHh
Confidence 211 111110 0000000000 0112356789999999999999999999998
Q ss_pred HH
Q 011508 461 AQ 462 (484)
Q Consensus 461 ~~ 462 (484)
+.
T Consensus 301 ~h 302 (504)
T 3q5i_A 301 NS 302 (504)
T ss_dssp TS
T ss_pred cC
Confidence 53
No 212
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=1.1e-41 Score=332.14 Aligned_cols=288 Identities=22% Similarity=0.236 Sum_probs=202.1
Q ss_pred hcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
..++|.+.+.||+|+||.||+|+.. .+++.||||++..... .....+.+|+.++++++||||+++++++....+...
T Consensus 9 i~~~y~~~~~lg~G~~g~V~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 86 (353)
T 2b9h_A 9 ISSDFQLKSLLGEGAYGVVCSATHK--PTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENF 86 (353)
T ss_dssp SCTTEEEEEEEEECSSEEEEEEEET--TTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTC
T ss_pred cccceEEeeEEcCCCCeEEEEEEEC--CCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCcc
Confidence 3578999999999999999999854 4578999999964432 234568899999999999999999998765555556
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
...++||||+. ++|.+++.. ..+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||
T Consensus 87 ~~~~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg 157 (353)
T 2b9h_A 87 NEVYIIQELMQ-TDLHRVIST-----QMLSDDHIQYFIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFG 157 (353)
T ss_dssp CCEEEEECCCS-EEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCT
T ss_pred ceEEEEEeccC-ccHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEcCCCcEEEEecc
Confidence 78899999995 699999874 24899999999999999999999 8999999999999999999999999999
Q ss_pred cccccccccccCCC---CccccccccccccccCccccC-CCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHH
Q 011508 316 LAKFLPEAANNLSS---NQSSSVGVKGTVGYAAPEYGM-GSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFV 391 (484)
Q Consensus 316 ~a~~~~~~~~~~~~---~~~~~~~~~g~~~y~aPE~~~-~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 391 (484)
++............ .........||..|+|||++. +..++.++|||||||++|||++|+.||....... .+....
T Consensus 158 ~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~ 236 (353)
T 2b9h_A 158 LARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH-QLLLIF 236 (353)
T ss_dssp TCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHH
T ss_pred cccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHH
Confidence 99876543211110 011123356899999999765 4678999999999999999999999997642111 011110
Q ss_pred Hhhcchh----hhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 392 KEALPER----LAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 392 ~~~~~~~----~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
....... ...+........... ...............++.++.+++.+||+.||++|||+.|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 237 GIIGTPHSDNDLRCIESPRAREYIKS-----LPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp HHHCCCCSTTTTTTCCCHHHHHHHHT-----SCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHhCCCchhccccccccchhhHHhhc-----ccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0000000 000000000000000 0000000000001234667899999999999999999999986
No 213
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=3.6e-41 Score=323.07 Aligned_cols=252 Identities=25% Similarity=0.337 Sum_probs=196.2
Q ss_pred hcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCc
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
..++|++.+.||+|+||.||+|+.. .+++.||+|++.... ..+.+.+|+.++++++||||+++++++.. +.
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~ 97 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHK--ETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFK-----NT 97 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEET--TTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEE-----TT
T ss_pred chhhhhhheeeccCCCeEEEEEEEC--CCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEe-----CC
Confidence 4567999999999999999999854 457889999997543 34678999999999999999999998643 44
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCc
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGL 316 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 316 (484)
..++||||+++++|.+++... ...+++..++.++.|++.||+||| +.+++|+||||+||+++.++.+||+|||.
T Consensus 98 ~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~ 171 (314)
T 3com_A 98 DLWIVMEYCGAGSVSDIIRLR---NKTLTEDEIATILQSTLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGV 171 (314)
T ss_dssp EEEEEEECCTTEEHHHHHHHH---TCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTT
T ss_pred EEEEEeecCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCcCHHHEEECCCCCEEEeeccc
Confidence 789999999999999999743 235899999999999999999999 89999999999999999999999999999
Q ss_pred ccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcc
Q 011508 317 AKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALP 396 (484)
Q Consensus 317 a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 396 (484)
+....... .......|+..|+|||.+.+..++.++||||||+++|+|++|+.||...... .....
T Consensus 172 ~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~~~~--- 236 (314)
T 3com_A 172 AGQLTDTM-------AKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPM-----RAIFM--- 236 (314)
T ss_dssp CEECBTTB-------SCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHH-----HHHHH---
T ss_pred chhhhhhc-------cccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChH-----HHHHH---
Confidence 97653321 1122346899999999999989999999999999999999999999753211 00000
Q ss_pred hhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 397 ERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 397 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
+.....+.+. .+..++..+.+++..||+.||.+|||+.|+++
T Consensus 237 --~~~~~~~~~~---------------------~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 237 --IPTNPPPTFR---------------------KPELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp --HHHSCCCCCS---------------------SGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred --HhcCCCcccC---------------------CcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 0000000000 01223567899999999999999999999986
No 214
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=3.7e-41 Score=329.35 Aligned_cols=291 Identities=21% Similarity=0.223 Sum_probs=194.3
Q ss_pred HHHhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeecc-
Q 011508 154 LFKATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDF- 232 (484)
Q Consensus 154 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~- 232 (484)
.....++|++.+.||+|+||.||+|+.. .++..||||++.... .....+.++++.+..++||||+++++++.....
T Consensus 18 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 18 SRKEMDRFQVERMAGQGTFGTVQLGKEK--STGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHTTEEEC----------CEEEEET--TTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred chhhccceEEEEEEecCCCeEEEEEEEC--CCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 3456689999999999999999999954 457889999886543 233567788889999999999999999866442
Q ss_pred -CCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecC-CCceE
Q 011508 233 -QGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDG-ELTAH 310 (484)
Q Consensus 233 -~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~-~~~~k 310 (484)
....+.++||||+++ +|.+.+.........+++..+..++.|++.||+|||.. +++|+||||||+||+++. ++.+|
T Consensus 95 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~~~ivH~Dlkp~NIll~~~~~~~k 172 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLP-SVNVCHRDIKPHNVLVNEADGTLK 172 (360)
T ss_dssp CTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTST-TTCCBCSCCCGGGEEEETTTTEEE
T ss_pred cccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCC-CCCeecCcCCHHHEEEeCCCCcEE
Confidence 223347899999965 66655554333455689999999999999999999943 689999999999999997 89999
Q ss_pred EcccCcccccccccccCCCCccccccccccccccCccccCCC-CCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhH
Q 011508 311 VSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGS-EVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHN 389 (484)
Q Consensus 311 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~ 389 (484)
|+|||++....... ......||..|+|||++.+. .++.++|||||||++|||++|+.||...... ..+..
T Consensus 173 l~Dfg~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~-~~~~~ 243 (360)
T 3e3p_A 173 LCDFGSAKKLSPSE--------PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSA-GQLHE 243 (360)
T ss_dssp ECCCTTCBCCCTTS--------CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHH
T ss_pred EeeCCCceecCCCC--------CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChH-HHHHH
Confidence 99999998764322 12234689999999988664 4899999999999999999999999764221 11222
Q ss_pred HHHhhc--chhhhhhcCccccc-ccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 390 FVKEAL--PERLAEIVDPVLLV-EREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 390 ~~~~~~--~~~~~~~~d~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
...... +......+++.... +.......... ... ......+..++.+++.+||+.||++|||+.|+++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 244 IVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWS---NVF-SDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp HHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHH---HHT-TTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHHHcCCCCHHHHHhcccchhhccccccccCCcc---ccc-chhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 221111 11111111111100 00000000000 000 00011236789999999999999999999999863
No 215
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-41 Score=331.68 Aligned_cols=257 Identities=24% Similarity=0.321 Sum_probs=198.8
Q ss_pred CCCCccCccccccceeEEEEEEcC-CCCeeEEEEEEeeccC----ccchHHHHHHHHHHHcC-CCCCceeEeeeeeeecc
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDH-DDHETLVAVKVLNLQH----RGASKSFIAECQALRSI-RHRNLVKIITSCVSVDF 232 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~ 232 (484)
++|++.+.||+|+||.||+|+... ..+++.||||+++... ....+.+.+|+++++++ +||||+++++++..
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~--- 130 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT--- 130 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEE---
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEee---
Confidence 578999999999999999998632 3467899999986432 12335677899999999 79999999998543
Q ss_pred CCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEc
Q 011508 233 QGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVS 312 (484)
Q Consensus 233 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~ 312 (484)
+...++||||+++|+|.+++.... .+++..++.++.|++.||+||| +++|+||||||+|||++.++.+||+
T Consensus 131 --~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~ 201 (355)
T 1vzo_A 131 --ETKLHLILDYINGGELFTHLSQRE----RFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLT 201 (355)
T ss_dssp --TTEEEEEECCCCSCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEES
T ss_pred --CceEEEEeecCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCcEEEe
Confidence 447899999999999999997543 4899999999999999999999 8899999999999999999999999
Q ss_pred ccCcccccccccccCCCCccccccccccccccCccccCC--CCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHH
Q 011508 313 DFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG--SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNF 390 (484)
Q Consensus 313 Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~ 390 (484)
|||+++...... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... .....
T Consensus 202 DfG~a~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~-~~~~~ 274 (355)
T 1vzo_A 202 DFGLSKEFVADE------TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN-SQAEI 274 (355)
T ss_dssp CSSEEEECCGGG------GGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCC-CHHHH
T ss_pred eCCCCeecccCC------CCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccc-hHHHH
Confidence 999998653322 112233569999999999875 357899999999999999999999997532221 11111
Q ss_pred HHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCC-----CHHHHHHHH
Q 011508 391 VKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERM-----NMEEVAAQL 463 (484)
Q Consensus 391 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----t~~evl~~L 463 (484)
....... .+.. +.++...+.+++.+||+.||++|| |++|+++..
T Consensus 275 ~~~~~~~------~~~~-----------------------~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 275 SRRILKS------EPPY-----------------------PQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp HHHHHHC------CCCC-----------------------CTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred HHHHhcc------CCCC-----------------------CcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 1111000 0000 122255688999999999999999 999998754
No 216
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=1.6e-41 Score=326.61 Aligned_cols=252 Identities=25% Similarity=0.306 Sum_probs=193.1
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--------cchHHHHHHHHHHHcCCCCCceeEeeeeee
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--------GASKSFIAECQALRSIRHRNLVKIITSCVS 229 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~h~niv~~~~~~~~ 229 (484)
.++|.+.+.||+|+||.||+|+.. .+++.||||++..... .....+.+|++++++++||||+++++++.
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~- 85 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFER--KTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD- 85 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEET--TTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEE-
T ss_pred hhceeEeeEEecCCCEEEEEEEEc--CCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEc-
Confidence 357899999999999999999854 4578999999864321 12245789999999999999999999853
Q ss_pred eccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCc-
Q 011508 230 VDFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELT- 308 (484)
Q Consensus 230 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~- 308 (484)
.+ ..++||||+++++|.+++.. ...+++..++.++.|++.||+||| +++|+||||||+||+++.++.
T Consensus 86 ----~~-~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~ 153 (322)
T 2ycf_A 86 ----AE-DYYIVLELMEGGELFDKVVG----NKRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEED 153 (322)
T ss_dssp ----SS-SEEEEEECCTTEETHHHHST----TCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSSS
T ss_pred ----CC-ceEEEEecCCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEecCCCC
Confidence 22 37999999999999999863 245899999999999999999999 899999999999999987654
Q ss_pred --eEEcccCcccccccccccCCCCccccccccccccccCcccc---CCCCCCcccceehhhHHHHHHHhCCCCCCCCccC
Q 011508 309 --AHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYG---MGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTG 383 (484)
Q Consensus 309 --~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~---~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~ 383 (484)
+||+|||++....... ......||..|+|||++ ....++.++|||||||++|+|++|+.||......
T Consensus 154 ~~~kl~Dfg~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~ 225 (322)
T 2ycf_A 154 CLIKITDFGHSKILGETS--------LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ 225 (322)
T ss_dssp CCEEECCCTTCEECCCCH--------HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCS
T ss_pred CeEEEccCccceeccccc--------ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchH
Confidence 9999999998653221 11234589999999986 3567899999999999999999999999764322
Q ss_pred CccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 384 NLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
. .+...+.........+. ...++..+.+++.+||+.||++|||+.|+++
T Consensus 226 ~-~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 226 V-SLKDQITSGKYNFIPEV----------------------------WAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp S-CHHHHHHHTCCCCCHHH----------------------------HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred H-HHHHHHHhCccccCchh----------------------------hhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 1 12111111000000000 1122567899999999999999999999985
No 217
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=8.4e-42 Score=335.10 Aligned_cols=267 Identities=12% Similarity=0.022 Sum_probs=182.8
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc---cchHHHHHHH---HHHHcCCCCCceeEeeeee----
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR---GASKSFIAEC---QALRSIRHRNLVKIITSCV---- 228 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~e~---~~l~~l~h~niv~~~~~~~---- 228 (484)
..|.+.+.||+|+||.||+|+.. .+++.||+|++..... ...+.+.+|+ .+|+. +||||++++..+.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d 138 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDV--ERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSD 138 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEET--TTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCE
T ss_pred eeeeeeeeccCCCCEEEEEEEEC--CCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeeh
Confidence 45888999999999999999954 3578999999987543 2235567774 45555 7999888653321
Q ss_pred ---eecc------------CCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHH------HHHHHHHHHHHHHHHhcC
Q 011508 229 ---SVDF------------QGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQR------LSIAVDVASTLEYLHHYC 287 (484)
Q Consensus 229 ---~~~~------------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~------~~i~~~i~~~l~~LH~~~ 287 (484)
.... ......++||||++ |+|.+++..... .+++..+ +.++.||+.||+|||
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~---~~~~~~~~~~~vk~~i~~qi~~aL~~LH--- 211 (371)
T 3q60_A 139 AVAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF---VYVFRGDEGILALHILTAQLIRLAANLQ--- 211 (371)
T ss_dssp EEEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH---SCCCCHHHHHHHHHHHHHHHHHHHHHHH---
T ss_pred heecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc---ccchhhhhhhhhHHHHHHHHHHHHHHHH---
Confidence 1100 00145799999998 899999985421 2344455 778899999999999
Q ss_pred CCCeeecCCCCCCeeecCCCceEEcccCcccccccccccCCCCccccccccccccccCccccCC--CCCCcccceehhhH
Q 011508 288 ETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG--SEVSTSGDVYSFGI 365 (484)
Q Consensus 288 ~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~~Dvws~Gv 365 (484)
+++|+||||||+|||++.++.+||+|||+++...... ....+|+.|+|||++.+ ..++.++|||||||
T Consensus 212 ~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~----------~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~ 281 (371)
T 3q60_A 212 SKGLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRG----------PASSVPVTYAPREFLNASTATFTHALNAWQLGL 281 (371)
T ss_dssp HTTEEETTCSGGGEEECTTSCEEECCGGGEEETTCEE----------EGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHH
T ss_pred HCCCccCcCCHHHEEECCCCCEEEEecceeeecCCCc----------cCccCCcCCcChhhccCCCCCcCccccHHHHHH
Confidence 8999999999999999999999999999998653211 12346799999999987 67999999999999
Q ss_pred HHHHHHhCCCCCCCCccCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhcc
Q 011508 366 LLLEMFTGKGPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVIC 445 (484)
Q Consensus 366 vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c 445 (484)
++|||++|+.||.......... +.. ............. .....++..+.+++.+|
T Consensus 282 il~elltg~~Pf~~~~~~~~~~--~~~----~~~~~~~~~~~~~-------------------~~~~~~~~~~~~li~~~ 336 (371)
T 3q60_A 282 SIYRVWCLFLPFGLVTPGIKGS--WKR----PSLRVPGTDSLAF-------------------GSCTPLPDFVKTLIGRF 336 (371)
T ss_dssp HHHHHHHSSCSTTBCCTTCTTC--CCB----CCTTSCCCCSCCC-------------------TTSSCCCHHHHHHHHHH
T ss_pred HHHHHHhCCCCCCCcCcccccc--hhh----hhhhhccccccch-------------------hhccCCCHHHHHHHHHH
Confidence 9999999999997653221100 000 0000000000000 00123366789999999
Q ss_pred CCCCcCCCCCHHHHHH--HHHHHHHHH
Q 011508 446 SSELPRERMNMEEVAA--QLLSFRNKL 470 (484)
Q Consensus 446 l~~dP~~RPt~~evl~--~L~~i~~~~ 470 (484)
|+.||++|||+.|+++ .++++....
T Consensus 337 L~~dP~~Rpt~~e~l~hp~f~~~~~~~ 363 (371)
T 3q60_A 337 LNFDRRRRLLPLEAMETPEFLQLQNEI 363 (371)
T ss_dssp TCSSTTTCCCHHHHTTSHHHHHHHHHH
T ss_pred cCCChhhCCCHHHHhcCHHHHHHHHHH
Confidence 9999999999999985 355555444
No 218
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=6.5e-41 Score=319.89 Aligned_cols=255 Identities=23% Similarity=0.342 Sum_probs=197.5
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC----ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccC
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH----RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQ 233 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 233 (484)
.++|.+.+.||+|+||.||+|. +..++..||+|+++... ....+.+.+|++++++++||||+++++++.. .
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~--~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~ 78 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVL--DSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYN---E 78 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEE--BTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEC---C
T ss_pred ccceeEeeEEecCCCeEEEEEE--ECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEc---C
Confidence 3689999999999999999998 44567899999997542 2334678999999999999999999998642 3
Q ss_pred CCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcc
Q 011508 234 GNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSD 313 (484)
Q Consensus 234 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~D 313 (484)
.....++||||++++ |.+++.... ...+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|
T Consensus 79 ~~~~~~lv~e~~~~~-l~~~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~NIl~~~~~~~kl~d 152 (305)
T 2wtk_C 79 EKQKMYMVMEYCVCG-MQEMLDSVP--EKRFPVCQAHGYFCQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISA 152 (305)
T ss_dssp ---CEEEEEECCSEE-HHHHHHHST--TCSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECC
T ss_pred CCCeEEEEehhccCC-HHHHHHhCc--ccccCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEcCCCcEEeec
Confidence 345789999999766 777776543 346899999999999999999999 89999999999999999999999999
Q ss_pred cCcccccccccccCCCCccccccccccccccCccccCCCC--CCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHH
Q 011508 314 FGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSE--VSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFV 391 (484)
Q Consensus 314 fg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~--~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~ 391 (484)
||.+........ ........|+..|+|||++.+.. ++.++||||||+++|||++|+.||.... .....
T Consensus 153 fg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~ 222 (305)
T 2wtk_C 153 LGVAEALHPFAA-----DDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN-----IYKLF 222 (305)
T ss_dssp CTTCEECCTTCS-----SCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHH
T ss_pred cccccccCcccc-----ccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch-----HHHHH
Confidence 999987643211 11222346899999999987643 4789999999999999999999997531 11111
Q ss_pred HhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 392 KEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 392 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
.... ...... +..+...+.+++.+||+.||++|||+.|+++.
T Consensus 223 ~~i~--------~~~~~~---------------------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 223 ENIG--------KGSYAI---------------------PGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp HHHH--------HCCCCC---------------------CSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred HHHh--------cCCCCC---------------------CCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 1100 000000 12235678899999999999999999999875
No 219
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=3.7e-41 Score=332.67 Aligned_cols=276 Identities=21% Similarity=0.240 Sum_probs=194.0
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeecc-CCCce
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDF-QGNDF 237 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~-~~~~~ 237 (484)
.+|++.+.||+|+||.||+|+... ++. +|+|++..... ...+|+++++.++||||+++++++..... .+..+
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~--~~~-~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~ 112 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVE--SDE-VAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVF 112 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETT--TEE-EEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECC--CCe-EEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceE
Confidence 568999999999999999998643 333 88887754322 22369999999999999999999866542 33445
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeec-CCCceEEcccCc
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLD-GELTAHVSDFGL 316 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~-~~~~~kl~Dfg~ 316 (484)
.++||||++++ +.+.+.........+++..++.++.||+.||+||| +++|+||||||+||+++ .++.+||+|||+
T Consensus 113 ~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~kL~DFG~ 188 (394)
T 4e7w_A 113 LNLVLEYVPET-VYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGS 188 (394)
T ss_dssp EEEEEECCSEE-HHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred EEEEeeccCcc-HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEcCCCCcEEEeeCCC
Confidence 78999999764 44444332223456999999999999999999999 89999999999999999 789999999999
Q ss_pred ccccccccccCCCCccccccccccccccCccccCCC-CCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhc
Q 011508 317 AKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGS-EVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEAL 395 (484)
Q Consensus 317 a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 395 (484)
++...... ......+|+.|+|||++.+. .++.++||||+||++|||++|+.||.+.... ..+........
T Consensus 189 a~~~~~~~--------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~l~~i~~~~g 259 (394)
T 4e7w_A 189 AKILIAGE--------PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGI-DQLVEIIKVLG 259 (394)
T ss_dssp CEECCTTC--------CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHC
T ss_pred cccccCCC--------CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhC
Confidence 98763322 12234689999999988764 5899999999999999999999999764221 11122221111
Q ss_pred ch---hhhhhcCccccc-ccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 396 PE---RLAEIVDPVLLV-EREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 396 ~~---~~~~~~d~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
.. .+... ++.... ....... . + ........++.++.+|+.+||+.||++|||+.|+++.
T Consensus 260 ~p~~~~~~~~-~~~~~~~~~~~~~~--~----~-~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 260 TPSREQIKTM-NPNYMEHKFPQIRP--H----P-FSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp CCCHHHHHHH-CGGGSSSCCCCCCC--C----C-HHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred CCCHHHHHhh-ChhhhhhccccccC--C----c-HHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 00 01111 111000 0000000 0 0 0000012235679999999999999999999999863
No 220
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=1.9e-41 Score=338.31 Aligned_cols=199 Identities=25% Similarity=0.372 Sum_probs=167.9
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcC------CCCCceeEeeeeeeec
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSI------RHRNLVKIITSCVSVD 231 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l------~h~niv~~~~~~~~~~ 231 (484)
..+|++.+.||+|+||.||+|+. ..+++.||||+++... .....+.+|+.+++.+ +|+||+++++++..
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~--~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~-- 170 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYD--HKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTF-- 170 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEE--TTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEE--
T ss_pred cCcEEEEEEcccCccEEEEEEEE--CCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeeccc--
Confidence 46799999999999999999984 4457899999997532 2345677888888877 57799999998643
Q ss_pred cCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCc--e
Q 011508 232 FQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELT--A 309 (484)
Q Consensus 232 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~--~ 309 (484)
....++||||+. ++|.+++.... ...+++..++.++.||+.||+||| +++|+||||||+|||++.++. +
T Consensus 171 ---~~~~~lv~e~~~-~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NILl~~~~~~~v 241 (429)
T 3kvw_A 171 ---RNHICMTFELLS-MNLYELIKKNK--FQGFSLPLVRKFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGI 241 (429)
T ss_dssp ---TTEEEEEECCCC-CBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHH---HHTEECSCCSGGGEEESSTTSCCE
T ss_pred ---CCeEEEEEeccC-CCHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEccCCCcce
Confidence 348899999994 79999997543 234899999999999999999999 889999999999999999887 9
Q ss_pred EEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCC
Q 011508 310 HVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEM 380 (484)
Q Consensus 310 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~ 380 (484)
||+|||++...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 242 kL~DFG~a~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 242 KVIDFGSSCYEHQR----------VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp EECCCTTCEETTCC----------CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred EEeecccceecCCc----------ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 99999999754221 12346899999999999989999999999999999999999999764
No 221
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=5.8e-42 Score=334.87 Aligned_cols=279 Identities=19% Similarity=0.221 Sum_probs=184.9
Q ss_pred hcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCCCCceeEeeeeeeec-cC
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIRHRNLVKIITSCVSVD-FQ 233 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~ 233 (484)
..++|++.+.||+|+||.||+|.. ..+++.||||++..... ...+.+.+|+++++.++||||+++++++.... ..
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~a~~--~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 104 (367)
T 2fst_X 27 VPERYQNLSPVGSGAYGSVCAAFD--TKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE 104 (367)
T ss_dssp EETTEEEEEECC----CCEEEEEE--TTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGG
T ss_pred CCCceEEeeEEeecCCeEEEEEEE--CCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccc
Confidence 457899999999999999999984 44678999999865432 23467889999999999999999999875421 12
Q ss_pred CCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcc
Q 011508 234 GNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSD 313 (484)
Q Consensus 234 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~D 313 (484)
.....++|+|++ +++|.+++.. ..+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|
T Consensus 105 ~~~~~~lv~e~~-~~~L~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kL~D 175 (367)
T 2fst_X 105 EFNDVYLVTHLM-GADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILD 175 (367)
T ss_dssp GCCCCEEEEECC-CEECC----------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC
T ss_pred cCCeEEEEeccc-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHhhEEECCCCCEEEee
Confidence 235679999999 7899998863 35899999999999999999999 89999999999999999999999999
Q ss_pred cCcccccccccccCCCCccccccccccccccCccccCC-CCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHH
Q 011508 314 FGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVK 392 (484)
Q Consensus 314 fg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 392 (484)
||+++..... .....||..|+|||++.+ ..++.++||||+||++|||++|+.||.+.... ..+.....
T Consensus 176 FG~a~~~~~~----------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~l~~i~~ 244 (367)
T 2fst_X 176 FGLARHTADE----------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILR 244 (367)
T ss_dssp -------------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHH
T ss_pred cccccccccc----------CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHH
Confidence 9999865321 123468999999999876 67899999999999999999999999764211 11111111
Q ss_pred hhcc--hh-hhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 393 EALP--ER-LAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 393 ~~~~--~~-~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
.... .. +..+....... ... .........-......+...+.+|+.+||+.||++|||+.|+++.
T Consensus 245 ~~g~p~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 245 LVGTPGAELLKKISSESARN-YIQ----SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp HHCSCCHHHHTTCCCHHHHH-HHH----TSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HhCCCCHHHHHHhhhHHHHH-HHh----ccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 1000 00 11100000000 000 000000000000011225678999999999999999999999863
No 222
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=2.2e-41 Score=353.87 Aligned_cols=263 Identities=22% Similarity=0.367 Sum_probs=205.0
Q ss_pred hcCCCCccCccccccceeEEEEEEcCC-CCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCC
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHD-DHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQG 234 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 234 (484)
..++|++.+.||+|+||.||+|++... ..+..||+|.++.... ...+.+.+|+.++++++||||+++++++.
T Consensus 388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~------ 461 (656)
T 2j0j_A 388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT------ 461 (656)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC------
T ss_pred ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe------
Confidence 345688889999999999999987543 2357899999875433 23367899999999999999999999852
Q ss_pred CceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEccc
Q 011508 235 NDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDF 314 (484)
Q Consensus 235 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 314 (484)
++..++||||+++|+|.+++.... ..+++..++.++.|++.||+||| +++|+||||||+|||++.++.+||+||
T Consensus 462 ~~~~~lv~E~~~~g~L~~~l~~~~---~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDikp~NILl~~~~~vkL~DF 535 (656)
T 2j0j_A 462 ENPVWIIMELCTLGELRSFLQVRK---FSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDF 535 (656)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTT---TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCC
T ss_pred cCceEEEEEcCCCCcHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchHhEEEeCCCCEEEEec
Confidence 235789999999999999997432 35899999999999999999999 899999999999999999999999999
Q ss_pred CcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCccHhHHHHh
Q 011508 315 GLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLTLHNFVKE 393 (484)
Q Consensus 315 g~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~~~~~~~~ 393 (484)
|+++....... .......+++.|+|||++.+..++.++|||||||++|||++ |..||...... +....
T Consensus 536 G~a~~~~~~~~------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~-----~~~~~ 604 (656)
T 2j0j_A 536 GLSRYMEDSTY------YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-----DVIGR 604 (656)
T ss_dssp CCCCSCCC----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHHHH
T ss_pred CCCeecCCCcc------eeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH-----HHHHH
Confidence 99987643221 11122346789999999988899999999999999999997 99999753211 11110
Q ss_pred hcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHHHH
Q 011508 394 ALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRNKL 470 (484)
Q Consensus 394 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~ 470 (484)
. ..-.... .+..++..+.+++.+||+.||++|||+.|+++.|+.+.+..
T Consensus 605 i-----~~~~~~~-----------------------~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~~ 653 (656)
T 2j0j_A 605 I-----ENGERLP-----------------------MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 653 (656)
T ss_dssp H-----HHTCCCC-----------------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred H-----HcCCCCC-----------------------CCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence 0 0000000 02234667899999999999999999999999999987653
No 223
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=8.6e-41 Score=317.94 Aligned_cols=253 Identities=23% Similarity=0.315 Sum_probs=198.7
Q ss_pred hcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc---------cchHHHHHHHHHHHcCC-CCCceeEeee
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR---------GASKSFIAECQALRSIR-HRNLVKIITS 226 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~---------~~~~~~~~e~~~l~~l~-h~niv~~~~~ 226 (484)
..++|.+.+.||+|+||.||+|+. ..+++.||+|+++.... ...+.+.+|+++++++. ||||++++++
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~ 92 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIH--KPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDT 92 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEE--TTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEE--cCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeee
Confidence 347899999999999999999995 44678999999975431 12356789999999995 9999999998
Q ss_pred eeeeccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCC
Q 011508 227 CVSVDFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGE 306 (484)
Q Consensus 227 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~ 306 (484)
+ ..+...++||||+++++|.+++... ..+++..++.++.|++.||+||| +++|+||||||+||+++.+
T Consensus 93 ~-----~~~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~ 160 (298)
T 1phk_A 93 Y-----ETNTFFFLVFDLMKKGELFDYLTEK----VTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDD 160 (298)
T ss_dssp E-----ECSSEEEEEEECCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTT
T ss_pred e-----ccCCeEEEEEeccCCCcHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEcCC
Confidence 5 3455889999999999999999754 35899999999999999999999 8999999999999999999
Q ss_pred CceEEcccCcccccccccccCCCCccccccccccccccCccccC------CCCCCcccceehhhHHHHHHHhCCCCCCCC
Q 011508 307 LTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGM------GSEVSTSGDVYSFGILLLEMFTGKGPTNEM 380 (484)
Q Consensus 307 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~------~~~~~~~~Dvws~Gvvl~elltg~~p~~~~ 380 (484)
+.+||+|||.+....... ......++..|+|||++. ...++.++||||||+++|+|++|+.||...
T Consensus 161 ~~~kl~dfg~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~ 232 (298)
T 1phk_A 161 MNIKLTDFGFSCQLDPGE--------KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHR 232 (298)
T ss_dssp CCEEECCCTTCEECCTTC--------CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CcEEEecccchhhcCCCc--------ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCc
Confidence 999999999998654321 122346899999999874 456889999999999999999999999653
Q ss_pred ccCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHH
Q 011508 381 FTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVA 460 (484)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl 460 (484)
.. ....... ......... .....++..+.+++.+||+.||++|||+.|++
T Consensus 233 ~~-----~~~~~~~--------~~~~~~~~~-----------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll 282 (298)
T 1phk_A 233 KQ-----MLMLRMI--------MSGNYQFGS-----------------PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEAL 282 (298)
T ss_dssp SH-----HHHHHHH--------HHTCCCCCT-----------------TTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHT
T ss_pred cH-----HHHHHHH--------hcCCcccCc-----------------ccccccCHHHHHHHHHHccCCcccCCCHHHHH
Confidence 11 1111100 000000000 00122356789999999999999999999997
Q ss_pred H
Q 011508 461 A 461 (484)
Q Consensus 461 ~ 461 (484)
+
T Consensus 283 ~ 283 (298)
T 1phk_A 283 A 283 (298)
T ss_dssp T
T ss_pred h
Confidence 5
No 224
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=1.5e-40 Score=320.54 Aligned_cols=282 Identities=22% Similarity=0.262 Sum_probs=203.6
Q ss_pred HhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcC---CCCCceeEeeeeeee
Q 011508 156 KATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSI---RHRNLVKIITSCVSV 230 (484)
Q Consensus 156 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l---~h~niv~~~~~~~~~ 230 (484)
...++|++.+.||+|+||.||+|+.. ..+++.||+|+++.... .....+.+|+.+++.+ +||||+++++++...
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~ 86 (326)
T 1blx_A 8 RADQQYECVAEIGEGAYGKVFKARDL-KNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVS 86 (326)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEET-TTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEE
T ss_pred CchhceeeeeeecccccEEEEEEEec-CCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeec
Confidence 45578999999999999999999853 23568899999875432 2234566777777766 899999999998654
Q ss_pred ccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceE
Q 011508 231 DFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAH 310 (484)
Q Consensus 231 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~k 310 (484)
........++||||++ |+|.+++.... ...+++..++.++.|++.||+||| +++|+||||||+||+++.++.+|
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~lH---~~gi~H~dlkp~Nili~~~~~~k 160 (326)
T 1blx_A 87 RTDRETKLTLVFEHVD-QDLTTYLDKVP--EPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIK 160 (326)
T ss_dssp ECSSEEEEEEEEECCS-CBHHHHHHHSC--TTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEE
T ss_pred ccCCCceEEEEEecCC-CCHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHHHeEEcCCCCEE
Confidence 4445668899999996 69999997543 234899999999999999999999 89999999999999999999999
Q ss_pred EcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHH
Q 011508 311 VSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNF 390 (484)
Q Consensus 311 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~ 390 (484)
|+|||++....... ......|+..|+|||++.+..++.++|||||||++|||++|+.||....... .+...
T Consensus 161 l~Dfg~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~i 231 (326)
T 1blx_A 161 LADFGLARIYSFQM--------ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD-QLGKI 231 (326)
T ss_dssp ECSCCSCCCCCGGG--------GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHH
T ss_pred EecCcccccccCCC--------CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHH-HHHHH
Confidence 99999998654321 1223468999999999999899999999999999999999999997642211 11111
Q ss_pred HHhhcchhhhhhcCc-ccccc-cccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 391 VKEALPERLAEIVDP-VLLVE-REEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 391 ~~~~~~~~~~~~~d~-~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
...........+... ..... ..... ..........++..+.+++.+||+.||++|||+.|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 232 LDVIGLPGEEDWPRDVALPRQAFHSKS--------AQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp HHHHCCCCGGGSCTTCSSCGGGSCCCC--------CCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHcCCCCcccCccccccchhhhcccC--------cchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 111000000000000 00000 00000 00000001233567899999999999999999999985
No 225
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=7.9e-41 Score=321.40 Aligned_cols=279 Identities=19% Similarity=0.255 Sum_probs=195.5
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeec------
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVD------ 231 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------ 231 (484)
.++|.+.+.||+|+||.||+|+.. .+++.||+|++........+.+.+|++++++++||||+++++++....
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 87 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDN--DCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDD 87 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEET--TTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC-
T ss_pred CCceeEEEEeccCCCeEEEEEEEC--CCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccc
Confidence 467999999999999999999954 457899999998766555678899999999999999999999863211
Q ss_pred ---cCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeec-CCC
Q 011508 232 ---FQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLD-GEL 307 (484)
Q Consensus 232 ---~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~-~~~ 307 (484)
.......++||||++ |+|.+++.. ..+++..++.++.|++.||+||| +++|+||||||+||+++ +++
T Consensus 88 ~~~~~~~~~~~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~ 158 (320)
T 2i6l_A 88 VGSLTELNSVYIVQEYME-TDLANVLEQ-----GPLLEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANLFINTEDL 158 (320)
T ss_dssp ---CCSCSEEEEEEECCS-EEHHHHHTT-----CCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTT
T ss_pred cccccccCceeEEeeccC-CCHHHHhhc-----CCccHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCC
Confidence 234467899999996 699999863 34889999999999999999999 89999999999999997 567
Q ss_pred ceEEcccCcccccccccccCCCCccccccccccccccCccccCC-CCCCcccceehhhHHHHHHHhCCCCCCCCccCCcc
Q 011508 308 TAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLT 386 (484)
Q Consensus 308 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~ 386 (484)
.+||+|||++......... ........++..|+|||.+.+ ..++.++|||||||++|||++|+.||....... .
T Consensus 159 ~~kl~Dfg~~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~ 233 (320)
T 2i6l_A 159 VLKIGDFGLARIMDPHYSH----KGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELE-Q 233 (320)
T ss_dssp EEEECCCTTCBCC------------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-H
T ss_pred eEEEccCccccccCCCccc----ccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHH-H
Confidence 9999999999876432111 111223457899999998755 678999999999999999999999997642211 1
Q ss_pred HhHHHHhhcch----hhhhhcCc---ccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHH
Q 011508 387 LHNFVKEALPE----RLAEIVDP---VLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEV 459 (484)
Q Consensus 387 ~~~~~~~~~~~----~~~~~~d~---~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev 459 (484)
...... ..+. ...++.+. .+......... + .......++.++.+++.+||+.||++|||++|+
T Consensus 234 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~--~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el 303 (320)
T 2i6l_A 234 MQLILE-SIPVVHEEDRQELLSVIPVYIRNDMTEPHK-------P--LTQLLPGISREAVDFLEQILTFSPMDRLTAEEA 303 (320)
T ss_dssp HHHHHH-HSCCCCHHHHHHHHTTSCHHHHHHTTSCCC-------C--HHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHH
T ss_pred HHHHHH-hcCCCchhhhhhhhhcCcccccccccCCCC-------C--hhHhcchhhHHHHHHHHHHcCCCccccCCHHHH
Confidence 111111 1100 00111000 00000000000 0 000012236678999999999999999999999
Q ss_pred HHH
Q 011508 460 AAQ 462 (484)
Q Consensus 460 l~~ 462 (484)
++.
T Consensus 304 l~h 306 (320)
T 2i6l_A 304 LSH 306 (320)
T ss_dssp HTS
T ss_pred hCC
Confidence 863
No 226
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=1.2e-40 Score=317.09 Aligned_cols=278 Identities=23% Similarity=0.280 Sum_probs=196.6
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCc
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
++|++.+.||+|+||.||+|+.. .+++.||+|+++.... .....+.+|+.++++++||||+++++++.. ++
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~ 75 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNK--LTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT-----EN 75 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEET--TTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEE-----TT
T ss_pred chhhhhhhhccCCCeeEEEEEEc--CCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEec-----CC
Confidence 57889999999999999999854 4578899999875432 234678899999999999999999999643 44
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCc
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGL 316 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 316 (484)
..++||||+. ++|.+++.... ...+++..++.++.|++.||+||| +++|+||||||+||+++.++.+||+|||.
T Consensus 76 ~~~lv~e~~~-~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~ 149 (299)
T 2r3i_A 76 KLYLVFEFLH-QDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGL 149 (299)
T ss_dssp EEEEEEECCS-EEHHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECSTTH
T ss_pred ceEEEEEccc-CCHHHHHHhhh--ccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHeEEcCCCCEEECcchh
Confidence 7899999996 69999997543 235889999999999999999999 88999999999999999999999999999
Q ss_pred ccccccccccCCCCccccccccccccccCccccCCCC-CCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhc
Q 011508 317 AKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSE-VSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEAL 395 (484)
Q Consensus 317 a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 395 (484)
+....... .......+|..|+|||.+.+.. ++.++||||||+++|+|++|+.||....... .+........
T Consensus 150 ~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~ 221 (299)
T 2r3i_A 150 ARAFGVPV-------RTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID-QLFRIFRTLG 221 (299)
T ss_dssp HHHHCCCS-------BCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHC
T ss_pred hhhccCCc-------cccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHH-HHHHHHHHhC
Confidence 87653221 1122345899999999987765 7999999999999999999999997642211 1111111100
Q ss_pred chhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 396 PERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 396 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
... +..-+.......... .........-......++.++.+++.+||+.||++|||+.|+++
T Consensus 222 ~~~--~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 222 TPD--EVVWPGVTSMPDYKP--SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp CCC--TTTSTTGGGSTTCCT--TSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCc--hhhhhHhhcCcccch--hhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 000 000000000000000 00000000000001123567899999999999999999999986
No 227
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=3e-41 Score=328.37 Aligned_cols=264 Identities=20% Similarity=0.294 Sum_probs=199.2
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccc-----------------hHHHHHHHHHHHcCCCCCc
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGA-----------------SKSFIAECQALRSIRHRNL 220 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~-----------------~~~~~~e~~~l~~l~h~ni 220 (484)
.++|.+.+.||+|+||.||+|.. +++.||+|++....... .+.+.+|+.++++++||||
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 105 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK----DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYC 105 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE----TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTB
T ss_pred cCceEEEEEEcCCCCeEEEEEEc----CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCc
Confidence 46899999999999999999985 57899999997542211 1789999999999999999
Q ss_pred eeEeeeeeeeccCCCceeeEEeecccCCCHHHH------HhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC-CCeee
Q 011508 221 VKIITSCVSVDFQGNDFEALVYELMVNGSLEEW------LHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCE-TPIVH 293 (484)
Q Consensus 221 v~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~------l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH 293 (484)
+++++++. ..+..++||||+++++|.++ +.. .....+++..++.++.|++.||+||| + ++|+|
T Consensus 106 ~~~~~~~~-----~~~~~~lv~e~~~~~~L~~~~~~~~~l~~--~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H 175 (348)
T 2pml_X 106 LTCEGIIT-----NYDEVYIIYEYMENDSILKFDEYFFVLDK--NYTCFIPIQVIKCIIKSVLNSFSYIH---NEKNICH 175 (348)
T ss_dssp CCCSEEEE-----SSSEEEEEEECCTTCBSSEESSSEESSCS--SSCCCCCHHHHHHHHHHHHHHHHHHH---HTSCEEC
T ss_pred ceEEEEEe-----eCCeEEEEEeccCCCcHHHHHHHhhhhhh--ccccCCCHHHHHHHHHHHHHHHHHHh---ccCCEee
Confidence 99999964 34588999999999999998 442 12456999999999999999999999 7 99999
Q ss_pred cCCCCCCeeecCCCceEEcccCcccccccccccCCCCccccccccccccccCccccCCC-CCCc-ccceehhhHHHHHHH
Q 011508 294 CDLKPSNVLLDGELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGS-EVST-SGDVYSFGILLLEMF 371 (484)
Q Consensus 294 ~dlk~~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~-~~Dvws~Gvvl~ell 371 (484)
|||||+||+++.++.+||+|||.+...... ......|+..|+|||.+.+. .++. ++||||||+++|||+
T Consensus 176 ~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~ 246 (348)
T 2pml_X 176 RDVKPSNILMDKNGRVKLSDFGESEYMVDK---------KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMF 246 (348)
T ss_dssp CCCCGGGEEECTTSCEEECCCTTCEECBTT---------EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHH
T ss_pred cCCChHhEEEcCCCcEEEeccccccccccc---------cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHH
Confidence 999999999999999999999999865322 12234689999999998877 6666 999999999999999
Q ss_pred hCCCCCCCCccCCccHhHHHHhh-c--chhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCC
Q 011508 372 TGKGPTNEMFTGNLTLHNFVKEA-L--PERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSE 448 (484)
Q Consensus 372 tg~~p~~~~~~~~~~~~~~~~~~-~--~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~ 448 (484)
+|+.||....... .+...+... . +........+.. ..........++.++.+++.+||+.
T Consensus 247 ~g~~pf~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~l~~li~~~L~~ 309 (348)
T 2pml_X 247 YNVVPFSLKISLV-ELFNNIRTKNIEYPLDRNHFLYPLT----------------NKKSTCSNNFLSNEDIDFLKLFLRK 309 (348)
T ss_dssp HSSCSSCCSSCSH-HHHHHHTSCCCCCCCSSSSSTTTTC----------------C--------CCCHHHHHHHHHHCCS
T ss_pred hCCCCCCCCCcHH-HHHHHHhccCcCCccchhhhhcccc----------------ccccccchhhcCHHHHHHHHHHccC
Confidence 9999997643211 111111100 0 000000000000 0000000123356789999999999
Q ss_pred CcCCCCCHHHHHH
Q 011508 449 LPRERMNMEEVAA 461 (484)
Q Consensus 449 dP~~RPt~~evl~ 461 (484)
||++|||+.|+++
T Consensus 310 dP~~Rps~~e~l~ 322 (348)
T 2pml_X 310 NPAERITSEDALK 322 (348)
T ss_dssp SGGGSCCHHHHHT
T ss_pred ChhhCCCHHHHhc
Confidence 9999999999986
No 228
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=1.2e-41 Score=327.13 Aligned_cols=266 Identities=23% Similarity=0.303 Sum_probs=196.7
Q ss_pred HHhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCCCCceeEeeeeeeecc
Q 011508 155 FKATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIRHRNLVKIITSCVSVDF 232 (484)
Q Consensus 155 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 232 (484)
....++|++.+.||+|+||.||+|... ..+|+|+++.... ...+.+.+|+.++++++||||+++++++..
T Consensus 29 ~i~~~~~~~~~~lg~G~~g~V~~~~~~-----~~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--- 100 (319)
T 2y4i_B 29 DIPFEQLEIGELIGKGRFGQVYHGRWH-----GEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMS--- 100 (319)
T ss_dssp SSCCSCEECCCBCCCSSSSEEEEEEES-----SSEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEEC---
T ss_pred cCCHHHeEEeeEeccCCceEEEEEEEc-----CeEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEec---
Confidence 345678999999999999999999864 2499999875432 233567889999999999999999999643
Q ss_pred CCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEc
Q 011508 233 QGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVS 312 (484)
Q Consensus 233 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~ 312 (484)
....++||||+++++|.+++... ...+++..++.++.|++.||+||| +++|+||||||+||+++ ++.+||+
T Consensus 101 --~~~~~iv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~NIl~~-~~~~~l~ 171 (319)
T 2y4i_B 101 --PPHLAIITSLCKGRTLYSVVRDA---KIVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYD-NGKVVIT 171 (319)
T ss_dssp --SSCEEEECBCCCSEEHHHHTTSS---CCCCCSHHHHHHHHHHHHHHHHHH---HTTCCCCCCCSTTEEEC---CCEEC
T ss_pred --CCceEEEeecccCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChhhEEEe-CCCEEEe
Confidence 44789999999999999999743 345889999999999999999999 88999999999999998 6799999
Q ss_pred ccCcccccccccccCCCCccccccccccccccCccccCC---------CCCCcccceehhhHHHHHHHhCCCCCCCCccC
Q 011508 313 DFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG---------SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTG 383 (484)
Q Consensus 313 Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~---------~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~ 383 (484)
|||++......... ..........|+..|+|||++.. ..++.++||||||+++|||++|+.||......
T Consensus 172 Dfg~~~~~~~~~~~--~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~ 249 (319)
T 2y4i_B 172 DFGLFSISGVLQAG--RREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE 249 (319)
T ss_dssp CCSCCC------------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHH
T ss_pred ecCCcccccccccc--ccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 99998765322111 11122233458999999998764 45788999999999999999999999753211
Q ss_pred CccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHH
Q 011508 384 NLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQL 463 (484)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L 463 (484)
...... ..-..+... ...++.++.+++..||+.||++|||+.|+++.|
T Consensus 250 -----~~~~~~-----~~~~~~~~~----------------------~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l 297 (319)
T 2y4i_B 250 -----AIIWQM-----GTGMKPNLS----------------------QIGMGKEISDILLFCWAFEQEERPTFTKLMDML 297 (319)
T ss_dssp -----HHHHHH-----HTTCCCCCC----------------------CSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHH
T ss_pred -----HHHHHh-----ccCCCCCCC----------------------cCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHH
Confidence 111110 000111100 011244688999999999999999999999999
Q ss_pred HHHHHHHh
Q 011508 464 LSFRNKLV 471 (484)
Q Consensus 464 ~~i~~~~~ 471 (484)
+.+.....
T Consensus 298 ~~l~~~~~ 305 (319)
T 2y4i_B 298 EKLPKRNR 305 (319)
T ss_dssp TTC-----
T ss_pred HHHHHhhc
Confidence 99887653
No 229
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=5.8e-41 Score=328.93 Aligned_cols=279 Identities=18% Similarity=0.202 Sum_probs=195.4
Q ss_pred hcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCcc--chHHHHHHHHHHHcCCCCCceeEeeeeeeeccC-
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRG--ASKSFIAECQALRSIRHRNLVKIITSCVSVDFQ- 233 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~- 233 (484)
..++|.+.+.||+|+||.||+|+. ..+++.||+|++...... ..+.+.+|+.+++.++||||+++++++...+..
T Consensus 40 l~~~y~~~~~lG~G~~g~Vy~~~~--~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 117 (371)
T 4exu_A 40 LPKTYVSPTHVGSGAYGSVCSAID--KRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLR 117 (371)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEE--TTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSST
T ss_pred ccccEEEEeEEecCCCeEEEEEEE--CCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcc
Confidence 346899999999999999999984 446789999999754322 246788999999999999999999987543211
Q ss_pred CCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcc
Q 011508 234 GNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSD 313 (484)
Q Consensus 234 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~D 313 (484)
.....++||||+. ++|.+++. ..+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|
T Consensus 118 ~~~~~~lv~e~~~-~~l~~~~~------~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kL~D 187 (371)
T 4exu_A 118 NFYDFYLVMPFMQ-TDLQKIMG------MEFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILD 187 (371)
T ss_dssp TCCCCEEEEECCC-EEHHHHTT------SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECS
T ss_pred cceeEEEEEcccc-ccHHHHhh------cCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCcCHHHeEECCCCCEEEEe
Confidence 1113489999996 68888774 23899999999999999999999 88999999999999999999999999
Q ss_pred cCcccccccccccCCCCccccccccccccccCccccCC-CCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHH
Q 011508 314 FGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVK 392 (484)
Q Consensus 314 fg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 392 (484)
||+++..... .....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||....... .+.....
T Consensus 188 fg~a~~~~~~----------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~ 256 (371)
T 4exu_A 188 FGLARHADAE----------MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILK 256 (371)
T ss_dssp TTCC------------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHH
T ss_pred cCcccccccC----------cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHH
Confidence 9999865322 123468999999998877 678999999999999999999999997632111 1111111
Q ss_pred hhc--chhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 393 EAL--PERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 393 ~~~--~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
... +......+.......... ................+...+.+++.+||+.||++|||+.|+++.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 257 VTGVPGTEFVQKLNDKAAKSYIQ----SLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp HHCCCCHHHHTTCSCHHHHHHHH----HSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HhCCCcHHHHHHhhhhhhhhhhh----ccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 000 000111000000000000 000000000000012235678999999999999999999999864
No 230
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=3.3e-41 Score=323.18 Aligned_cols=263 Identities=24% Similarity=0.367 Sum_probs=195.2
Q ss_pred ccccHHhHHHhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCC--CCCcee
Q 011508 147 LRVSYQNLFKATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIR--HRNLVK 222 (484)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~--h~niv~ 222 (484)
..++++.+....++|++.+.||+|+||.||+|... +++.||+|++..... ...+.+.+|++++.+++ |+||++
T Consensus 16 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~ 92 (313)
T 3cek_A 16 ENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNE---KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIR 92 (313)
T ss_dssp ----CCEEEETTEEEEEEEEEECCSSEEEEEEECT---TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCC
T ss_pred CCCCeeeeeeccceEEEEEEecCCCCEEEEEEEcC---CCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEE
Confidence 34455555566678999999999999999999853 477899999975432 23467899999999997 599999
Q ss_pred EeeeeeeeccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCee
Q 011508 223 IITSCVSVDFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVL 302 (484)
Q Consensus 223 ~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIl 302 (484)
+++++. .+...++||| +.+++|.+++... ..+++..++.++.|++.||+||| +++|+||||||+||+
T Consensus 93 ~~~~~~-----~~~~~~lv~e-~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl 159 (313)
T 3cek_A 93 LYDYEI-----TDQYIYMVME-CGNIDLNSWLKKK----KSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFL 159 (313)
T ss_dssp EEEEEE-----CSSEEEEEEC-CCSEEHHHHHHHC----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEE
T ss_pred EEEEee-----cCCEEEEEEe-cCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEE
Confidence 999864 3447899999 5588999999753 35899999999999999999999 889999999999999
Q ss_pred ecCCCceEEcccCcccccccccccCCCCccccccccccccccCccccCC-----------CCCCcccceehhhHHHHHHH
Q 011508 303 LDGELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-----------SEVSTSGDVYSFGILLLEMF 371 (484)
Q Consensus 303 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-----------~~~~~~~Dvws~Gvvl~ell 371 (484)
+++ +.+||+|||++........ ........|++.|+|||++.+ ..++.++||||||+++|||+
T Consensus 160 ~~~-~~~kL~Dfg~~~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~ 233 (313)
T 3cek_A 160 IVD-GMLKLIDFGIANQMQPDTT-----SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT 233 (313)
T ss_dssp EET-TEEEECCCSSSCC-------------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHH
T ss_pred EEC-CeEEEeeccccccccCccc-----cccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHH
Confidence 975 7999999999987643221 111123468999999998765 46888999999999999999
Q ss_pred hCCCCCCCCccCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcC
Q 011508 372 TGKGPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPR 451 (484)
Q Consensus 372 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~ 451 (484)
+|+.||......... ...++++...... +..+...+.+++.+||+.||+
T Consensus 234 ~g~~pf~~~~~~~~~------------~~~~~~~~~~~~~-------------------~~~~~~~l~~li~~~l~~dp~ 282 (313)
T 3cek_A 234 YGKTPFQQIINQISK------------LHAIIDPNHEIEF-------------------PDIPEKDLQDVLKCCLKRDPK 282 (313)
T ss_dssp HSSCTTTTCCSHHHH------------HHHHHCTTSCCCC-------------------CCCSCHHHHHHHHHHTCSSTT
T ss_pred hCCCchhhHHHHHHH------------HHHHHhcccccCC-------------------cccchHHHHHHHHHHccCCcc
Confidence 999999653221110 1111111111100 111245688999999999999
Q ss_pred CCCCHHHHHHH
Q 011508 452 ERMNMEEVAAQ 462 (484)
Q Consensus 452 ~RPt~~evl~~ 462 (484)
+|||+.|+++.
T Consensus 283 ~Rps~~ell~h 293 (313)
T 3cek_A 283 QRISIPELLAH 293 (313)
T ss_dssp TSCCHHHHHTS
T ss_pred cCcCHHHHhcC
Confidence 99999999875
No 231
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=9.7e-41 Score=327.97 Aligned_cols=283 Identities=19% Similarity=0.247 Sum_probs=199.1
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCC-----------CCCceeEeee
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIR-----------HRNLVKIITS 226 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----------h~niv~~~~~ 226 (484)
.++|.+.+.||+|+||.||+|+. ..+++.||||++... ....+.+.+|+.++++++ |+||++++++
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~ 94 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKD--MVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDH 94 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEE--TTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEe--cCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHH
Confidence 36799999999999999999984 346789999998743 223467889999999886 8999999998
Q ss_pred eeeeccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CeeecCCCCCCeeec-
Q 011508 227 CVSVDFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCET-PIVHCDLKPSNVLLD- 304 (484)
Q Consensus 227 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~dlk~~NIll~- 304 (484)
+...+ .+....++||||+ +++|.+++.... ...+++..++.++.||+.||+||| ++ +|+||||||+||+++
T Consensus 95 ~~~~~-~~~~~~~lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~lH---~~~~ivH~Dikp~NIll~~ 167 (373)
T 1q8y_A 95 FNHKG-PNGVHVVMVFEVL-GENLLALIKKYE--HRGIPLIYVKQISKQLLLGLDYMH---RRCGIIHTDIKPENVLMEI 167 (373)
T ss_dssp EEEEE-TTEEEEEEEECCC-CEEHHHHHHHTT--TSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECSCCSGGGEEEEE
T ss_pred hhccC-CCCceEEEEEecC-CCCHHHHHHHhh--ccCCcHHHHHHHHHHHHHHHHHHH---hcCCEEecCCChHHeEEec
Confidence 76543 2344789999999 999999998543 234899999999999999999999 77 999999999999994
Q ss_pred -----CCCceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCC
Q 011508 305 -----GELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNE 379 (484)
Q Consensus 305 -----~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~ 379 (484)
..+.+||+|||++...... .....||+.|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus 168 ~~~~~~~~~~kl~Dfg~a~~~~~~----------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 237 (373)
T 1q8y_A 168 VDSPENLIQIKIADLGNACWYDEH----------YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEP 237 (373)
T ss_dssp EETTTTEEEEEECCCTTCEETTBC----------CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC--
T ss_pred cCCCcCcceEEEcccccccccCCC----------CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 3448999999999866322 1223689999999999999999999999999999999999999976
Q ss_pred CccCCc-----cHhHHHHh--hcchhh-------hhhcCcc-cccccccccchhhhhhhccccccchhHHHHHHHhHhhc
Q 011508 380 MFTGNL-----TLHNFVKE--ALPERL-------AEIVDPV-LLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVI 444 (484)
Q Consensus 380 ~~~~~~-----~~~~~~~~--~~~~~~-------~~~~d~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 444 (484)
...... .+...... ..+... ....+.. .............. .........+..+..++.+|+.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~ 316 (373)
T 1q8y_A 238 DEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLE-DVLTEKYKFSKDEAKEISDFLSP 316 (373)
T ss_dssp -------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHH-HHHHHTTCCCHHHHHHHHHHHGG
T ss_pred CcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchh-hhhhhcccCCcchHHHHHHHHHH
Confidence 432111 11111110 001000 0000000 00000000000000 00000011234567889999999
Q ss_pred cCCCCcCCCCCHHHHHH
Q 011508 445 CSSELPRERMNMEEVAA 461 (484)
Q Consensus 445 cl~~dP~~RPt~~evl~ 461 (484)
||+.||++|||++|+++
T Consensus 317 ~L~~dP~~Rpt~~ell~ 333 (373)
T 1q8y_A 317 MLQLDPRKRADAGGLVN 333 (373)
T ss_dssp GGCSSTTTCBCHHHHHT
T ss_pred HhccCccccCCHHHHhh
Confidence 99999999999999986
No 232
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=2.7e-40 Score=312.79 Aligned_cols=252 Identities=23% Similarity=0.305 Sum_probs=197.0
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccC--ccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQH--RGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
.++|++.+.||+|+||.||+|+.. .+++.||+|++.... ....+.+.+|++++++++||||+++++++. ..
T Consensus 21 ~~~y~i~~~lg~G~~g~V~~~~~~--~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~ 93 (287)
T 2wei_A 21 AERYNIVCMLGKGSFGEVLKCKDR--ITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILE-----DS 93 (287)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEET--TTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEE-----CS
T ss_pred hhcceeeEEEcCCCCEEEEEEEEc--CCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEe-----CC
Confidence 467999999999999999999853 457889999987543 234568899999999999999999999854 34
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCC---CceEEc
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGE---LTAHVS 312 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~---~~~kl~ 312 (484)
...++||||+++++|.+++.... .+++..++.++.|++.||+||| +++|+||||||+||+++.+ +.+||+
T Consensus 94 ~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIlv~~~~~~~~~kL~ 166 (287)
T 2wei_A 94 SSFYIVGELYTGGELFDEIIKRK----RFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKII 166 (287)
T ss_dssp SEEEEEECCCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred CeEEEEEEccCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChhhEEEecCCCcccEEEe
Confidence 57899999999999999887543 4899999999999999999999 8899999999999999754 479999
Q ss_pred ccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHH
Q 011508 313 DFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVK 392 (484)
Q Consensus 313 Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 392 (484)
|||++....... ......++..|+|||.+.+ .++.++||||||+++|+|++|+.||...... ....
T Consensus 167 Dfg~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-----~~~~ 232 (287)
T 2wei_A 167 DFGLSTCFQQNT--------KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY-----DILK 232 (287)
T ss_dssp STTGGGTBCCCS--------SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHH
T ss_pred ccCcceeecCCC--------ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHH-----HHHH
Confidence 999988653321 1122358899999998876 4899999999999999999999999753211 1111
Q ss_pred hhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 393 EALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 393 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
... ........ + ....++.++.+++.+||+.||++|||+.|+++.
T Consensus 233 ~~~--------~~~~~~~~------------~-----~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 233 RVE--------TGKYAFDL------------P-----QWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp HHH--------HCCCCCCS------------G-----GGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred HHH--------cCCCCCCc------------h-----hhhhcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence 100 00000000 0 011235678999999999999999999999873
No 233
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=2.1e-40 Score=320.44 Aligned_cols=259 Identities=20% Similarity=0.236 Sum_probs=174.1
Q ss_pred hcCCCCccC-ccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 157 ATDGFSLEN-LIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 157 ~~~~~~~~~-~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
..++|.+.+ .||+|+||.||+|+.. .+++.||+|++.... ....+....++.++||||+++++++.... .++
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~--~~~~~vavK~~~~~~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~-~~~ 98 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHR--RTGQKCALKLLYDSP----KARQEVDHHWQASGGPHIVCILDVYENMH-HGK 98 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEET--TTCCEEEEEEEESSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEEE-TTE
T ss_pred ccceeEecceeeeeCCCeEEEEEEEC--CCCCEEEEEEecCcH----HHHHHHHHHHHhcCCCChHHHHHHHhhcc-CCC
Confidence 346788855 6999999999999954 457899999986431 22223333456679999999999875532 334
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecC---CCceEEc
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDG---ELTAHVS 312 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~---~~~~kl~ 312 (484)
...++||||+++|+|.+++.... ...+++.+++.++.|++.||+||| +++|+||||||+||+++. ++.+||+
T Consensus 99 ~~~~lv~e~~~gg~L~~~l~~~~--~~~l~~~~~~~i~~ql~~~l~~LH---~~~ivH~dlkp~NIll~~~~~~~~~kl~ 173 (336)
T 3fhr_A 99 RCLLIIMECMEGGELFSRIQERG--DQAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLT 173 (336)
T ss_dssp EEEEEEEECCTTEEHHHHHHTC---CCCCBHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEEC
T ss_pred ceEEEEEeccCCCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEEecCCCceEEEe
Confidence 56899999999999999998543 246999999999999999999999 889999999999999976 4569999
Q ss_pred ccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHH
Q 011508 313 DFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVK 392 (484)
Q Consensus 313 Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~ 392 (484)
|||++...... ......+|+.|+|||++.+..++.++|||||||++|+|++|+.||........... . .
T Consensus 174 Dfg~~~~~~~~---------~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~-~-~ 242 (336)
T 3fhr_A 174 DFGFAKETTQN---------ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPG-M-K 242 (336)
T ss_dssp CCTTCEEC-------------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------
T ss_pred ccccceecccc---------ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhh-H-H
Confidence 99999765322 11234589999999999888999999999999999999999999965422211000 0 0
Q ss_pred hhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 393 EALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 393 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
..+....... .......++.++.+++.+||+.||++|||+.|+++.
T Consensus 243 -------~~~~~~~~~~-----------------~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 243 -------RRIRLGQYGF-----------------PNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp ---------------CC-----------------CTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred -------Hhhhcccccc-----------------CchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0000000000 000012235678999999999999999999999874
No 234
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=7.8e-41 Score=322.60 Aligned_cols=258 Identities=22% Similarity=0.268 Sum_probs=176.1
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc-cchHHHHHHHH-HHHcCCCCCceeEeeeeeeeccCCC
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR-GASKSFIAECQ-ALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~-~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
.++|.+.+.||+|+||.||+|... .+++.||||+++.... .....+..|+. +++.++||||+++++++.. +
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~--~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~-----~ 93 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHK--PSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFR-----E 93 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEET--TTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEEC-----S
T ss_pred HHHhhehheeccCCCEEEEEEEEc--CCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEe-----C
Confidence 367899999999999999999953 4578999999976533 22345566666 6777899999999999643 4
Q ss_pred ceeeEEeecccCCCHHHHHhhcC-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CeeecCCCCCCeeecCCCceEEcc
Q 011508 236 DFEALVYELMVNGSLEEWLHLNR-DAPRNLNLLQRLSIAVDVASTLEYLHHYCET-PIVHCDLKPSNVLLDGELTAHVSD 313 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~dlk~~NIll~~~~~~kl~D 313 (484)
+..++||||++ ++|.+++.... .....+++..+..++.|++.||.||| +. +|+||||||+||+++.++.+||+|
T Consensus 94 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~ivH~dlkp~NIll~~~~~~kl~D 169 (327)
T 3aln_A 94 GDCWICMELMS-TSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLK---ENLKIIHRDIKPSNILLDRSGNIKLCD 169 (327)
T ss_dssp SEEEEEECCCS-EEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHH---HHHSCCCSCCCGGGEEEETTTEEEECC
T ss_pred CceEEEEeecC-CChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHh---ccCCEeECCCCHHHEEEcCCCCEEEcc
Confidence 47899999996 48888776321 12346899999999999999999999 77 999999999999999999999999
Q ss_pred cCcccccccccccCCCCccccccccccccccCcccc----CCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhH
Q 011508 314 FGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYG----MGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHN 389 (484)
Q Consensus 314 fg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~----~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~ 389 (484)
||++....... ......||..|+|||++ .+..++.++||||||+++|||++|+.||.........
T Consensus 170 fg~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~--- 238 (327)
T 3aln_A 170 FGISGQLVDSI--------AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQ--- 238 (327)
T ss_dssp CSSSCC--------------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC---------
T ss_pred CCCceeccccc--------ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHH---
Confidence 99998663321 11223589999999998 4567899999999999999999999999753211000
Q ss_pred HHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 390 FVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 390 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
+..+....... ........++..+.+++..||+.||++|||+.|+++.
T Consensus 239 ---------~~~~~~~~~~~----------------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 239 ---------LTQVVKGDPPQ----------------LSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp ----------CCCCCSCCCC----------------CCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred ---------HHHHhcCCCCC----------------CCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 00111000000 0000011235678999999999999999999999863
No 235
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=4.1e-40 Score=319.00 Aligned_cols=280 Identities=20% Similarity=0.261 Sum_probs=200.5
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCC------ceeEeeeeeeec
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRN------LVKIITSCVSVD 231 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~~~~~~~~~~ 231 (484)
.++|++.+.||+|+||.||+|... ..+++.||+|+++.. ....+.+.+|+++++.++|++ ++++++++.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~--- 87 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDH-KAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFE--- 87 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEET-TTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEE---
T ss_pred cCceEEEEEEecCCCeEEEEEEec-CCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccc---
Confidence 468999999999999999999852 335789999998643 233467889999999886654 899999854
Q ss_pred cCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecC------
Q 011508 232 FQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDG------ 305 (484)
Q Consensus 232 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~------ 305 (484)
..+..++||||+ +++|.+++.... ...+++..++.++.|++.||+||| +++|+||||||+||+++.
T Consensus 88 --~~~~~~lv~e~~-~~~l~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~ 159 (339)
T 1z57_A 88 --HHGHICIVFELL-GLSTYDFIKENG--FLPFRLDHIRKMAYQICKSVNFLH---SNKLTHTDLKPENILFVQSDYTEA 159 (339)
T ss_dssp --ETTEEEEEEECC-CCBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCCCEEEE
T ss_pred --cCCcEEEEEcCC-CCCHHHHHHhcC--CCCCcHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeccccccc
Confidence 345889999999 899999997543 235889999999999999999999 899999999999999987
Q ss_pred -------------CCceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh
Q 011508 306 -------------ELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT 372 (484)
Q Consensus 306 -------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt 372 (484)
++.+||+|||++...... .....||..|+|||++.+..++.++|||||||++|||++
T Consensus 160 ~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~ 229 (339)
T 1z57_A 160 YNPKIKRDERTLINPDIKVVDFGSATYDDEH----------HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYL 229 (339)
T ss_dssp EC----CEEEEESCCCEEECCCSSCEETTSC----------CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHH
T ss_pred cCCccccccccccCCCceEeeCcccccCccc----------cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHh
Confidence 668999999999864321 123468999999999999899999999999999999999
Q ss_pred CCCCCCCCccCCccHhHHHHh---hcchhh-hhhcCcccccccccccc--hhh------hhhhccccccchhHHHHHHHh
Q 011508 373 GKGPTNEMFTGNLTLHNFVKE---ALPERL-AEIVDPVLLVEREEGET--SEA------NAHKQRTRSFGGKECLVSVLG 440 (484)
Q Consensus 373 g~~p~~~~~~~~~~~~~~~~~---~~~~~~-~~~~d~~l~~~~~~~~~--~~~------~~~~~~~~~~~~~~~~~~l~~ 440 (484)
|+.||....... ....+.. ..+... ................. ... ..............+...+.+
T Consensus 230 g~~pf~~~~~~~--~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 307 (339)
T 1z57_A 230 GFTVFPTHDSKE--HLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFD 307 (339)
T ss_dssp SSCSCCCSCHHH--HHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHH
T ss_pred CCCCCCCCChHH--HHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHH
Confidence 999997542211 1111111 111111 10000000000000000 000 000000001113345788999
Q ss_pred HhhccCCCCcCCCCCHHHHHHH
Q 011508 441 IGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 441 l~~~cl~~dP~~RPt~~evl~~ 462 (484)
++.+||+.||++|||+.|+++.
T Consensus 308 li~~~L~~dP~~Rpt~~ell~h 329 (339)
T 1z57_A 308 LIQKMLEYDPAKRITLREALKH 329 (339)
T ss_dssp HHHHHTCSSTTTSCCHHHHTTS
T ss_pred HHHHHhCcCcccccCHHHHhcC
Confidence 9999999999999999999853
No 236
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=3.8e-40 Score=314.04 Aligned_cols=264 Identities=22% Similarity=0.306 Sum_probs=191.5
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeeeec------
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVSVD------ 231 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~------ 231 (484)
.++|++.+.||+|+||.||+|+. ..+++.||+|++... ....+.+.+|+.++++++||||+++++++....
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 81 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARN--ALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPM 81 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEE--TTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC--
T ss_pred cccchhhheeccCCcEEEEEEEE--cCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhh
Confidence 45789999999999999999984 345789999998643 233467889999999999999999999875421
Q ss_pred --cCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCce
Q 011508 232 --FQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTA 309 (484)
Q Consensus 232 --~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~ 309 (484)
.......++||||+++++|.+++... ...+++..++.++.|++.||+||| +++|+||||||+||+++.++.+
T Consensus 82 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dlkp~Nil~~~~~~~ 155 (303)
T 1zy4_A 82 TAVKKKSTLFIQMEYCENGTLYDLIHSE---NLNQQRDEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNV 155 (303)
T ss_dssp ----CEEEEEEEEECCCSCBHHHHHHHS---CGGGCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCE
T ss_pred cccccCCceEEEEecCCCCCHHHhhhcc---ccccchHHHHHHHHHHHHHHHHHH---hCCeecccCCHHhEEEcCCCCE
Confidence 12346789999999999999999743 245788999999999999999999 8899999999999999999999
Q ss_pred EEcccCcccccccccccC-------CCCccccccccccccccCccccCCC-CCCcccceehhhHHHHHHHhCCCCCCCCc
Q 011508 310 HVSDFGLAKFLPEAANNL-------SSNQSSSVGVKGTVGYAAPEYGMGS-EVSTSGDVYSFGILLLEMFTGKGPTNEMF 381 (484)
Q Consensus 310 kl~Dfg~a~~~~~~~~~~-------~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dvws~Gvvl~elltg~~p~~~~~ 381 (484)
||+|||++.......... ...........|+..|+|||++.+. .++.++|||||||++|||++ ||....
T Consensus 156 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~ 232 (303)
T 1zy4_A 156 KIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM 232 (303)
T ss_dssp EECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH
T ss_pred EEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch
Confidence 999999998764321100 0001122345689999999998764 68999999999999999998 543211
Q ss_pred cCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 382 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
. ....... +... ...+... ....++..+.+++.+||+.||++|||+.|+++
T Consensus 233 ~----~~~~~~~-----~~~~-~~~~~~~-------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 233 E----RVNILKK-----LRSV-SIEFPPD-------------------FDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp H----HHHHHHH-----HHST-TCCCCTT-------------------CCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred h----HHHHHHh-----cccc-ccccCcc-------------------ccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 0 0011100 0000 0000000 01222556889999999999999999999986
Q ss_pred H
Q 011508 462 Q 462 (484)
Q Consensus 462 ~ 462 (484)
.
T Consensus 284 h 284 (303)
T 1zy4_A 284 S 284 (303)
T ss_dssp S
T ss_pred C
Confidence 3
No 237
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=3.7e-40 Score=324.63 Aligned_cols=203 Identities=27% Similarity=0.389 Sum_probs=167.7
Q ss_pred HhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCC-CCC-----ceeEeeeeee
Q 011508 156 KATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIR-HRN-----LVKIITSCVS 229 (484)
Q Consensus 156 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~n-----iv~~~~~~~~ 229 (484)
...++|++.+.||+|+||+||+|+. ..+++.||||+++.. ......+..|+.+++.++ |++ ++++++++..
T Consensus 51 ~~~~~y~~~~~lG~G~~g~V~~~~~--~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~ 127 (382)
T 2vx3_A 51 KWMDRYEIDSLIGKGSFGQVVKAYD--RVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMF 127 (382)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEE--TTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEE
T ss_pred EeeeeEEEEEEEeecCCEEEEEEEE--cCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeecc
Confidence 4567899999999999999999984 445788999999743 223456778888888884 553 8888888543
Q ss_pred eccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeec--CCC
Q 011508 230 VDFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLD--GEL 307 (484)
Q Consensus 230 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~--~~~ 307 (484)
....++||||++ ++|.+++.... ...+++..+..++.|++.||+|||.. ..+|+||||||+|||++ .++
T Consensus 128 -----~~~~~lv~e~~~-~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~ 198 (382)
T 2vx3_A 128 -----RNHLCLVFEMLS-YNLYDLLRNTN--FRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRS 198 (382)
T ss_dssp -----TTEEEEEEECCC-CBHHHHHHHTT--TSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSC
T ss_pred -----CCceEEEEecCC-CCHHHHHhhcC--cCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCC
Confidence 458899999995 69999998543 23589999999999999999999932 47899999999999995 477
Q ss_pred ceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCC
Q 011508 308 TAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEM 380 (484)
Q Consensus 308 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~ 380 (484)
.+||+|||++...... .....||+.|+|||++.+..++.++|||||||++|||+||+.||...
T Consensus 199 ~~kL~DFG~a~~~~~~----------~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 199 AIKIVDFGSSCQLGQR----------IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp CEEECCCTTCEETTCC----------CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cEEEEeccCceecccc----------cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 8999999999866321 12346899999999999999999999999999999999999999764
No 238
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.3e-40 Score=318.83 Aligned_cols=245 Identities=22% Similarity=0.305 Sum_probs=189.4
Q ss_pred HHhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCcc------chHHHHHHHHHHHcC----CCCCceeEe
Q 011508 155 FKATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRG------ASKSFIAECQALRSI----RHRNLVKII 224 (484)
Q Consensus 155 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l----~h~niv~~~ 224 (484)
....++|++.+.||+|+||.||+|+ +..+++.||+|++...... ....+.+|+.++.++ +|+||++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~--~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~ 104 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGH--RLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLL 104 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEE--CTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEE--EccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEE
Confidence 3456789999999999999999998 4456789999999754321 223456789999988 899999999
Q ss_pred eeeeeeccCCCceeeEEeec-ccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeee
Q 011508 225 TSCVSVDFQGNDFEALVYEL-MVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLL 303 (484)
Q Consensus 225 ~~~~~~~~~~~~~~~lv~e~-~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll 303 (484)
+++. ..+..++|+|+ +.+++|.+++.... .+++..++.++.|++.||+||| +++|+||||||+||++
T Consensus 105 ~~~~-----~~~~~~~v~e~~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~ 172 (312)
T 2iwi_A 105 DWFE-----TQEGFMLVLERPLPAQDLFDYITEKG----PLGEGPSRCFFGQVVAAIQHCH---SRGVVHRDIKDENILI 172 (312)
T ss_dssp EEC----------CEEEEECCSSEEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHH---HHTEECCCCSGGGEEE
T ss_pred EEEe-----cCCeEEEEEEecCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChhhEEE
Confidence 9853 34578999999 78999999997543 4899999999999999999999 8899999999999999
Q ss_pred c-CCCceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCC-CcccceehhhHHHHHHHhCCCCCCCCc
Q 011508 304 D-GELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEV-STSGDVYSFGILLLEMFTGKGPTNEMF 381 (484)
Q Consensus 304 ~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dvws~Gvvl~elltg~~p~~~~~ 381 (484)
+ .++.+||+|||++....... .....|+..|+|||++.+..+ +.++||||||+++|||++|+.||....
T Consensus 173 ~~~~~~~kl~dfg~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 243 (312)
T 2iwi_A 173 DLRRGCAKLIDFGSGALLHDEP---------YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ 243 (312)
T ss_dssp ETTTTEEEECCCSSCEECCSSC---------BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH
T ss_pred eCCCCeEEEEEcchhhhcccCc---------ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH
Confidence 9 88999999999998764321 123458999999998876665 458999999999999999999996420
Q ss_pred cCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 382 TGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
.... ..... +..+...+.+++.+||+.||++|||++|+++
T Consensus 244 -------~~~~------------~~~~~---------------------~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 244 -------EILE------------AELHF---------------------PAHVSPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp -------HHHH------------TCCCC---------------------CTTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred -------HHhh------------hccCC---------------------cccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0000 00000 1122556889999999999999999999987
Q ss_pred H
Q 011508 462 Q 462 (484)
Q Consensus 462 ~ 462 (484)
.
T Consensus 284 ~ 284 (312)
T 2iwi_A 284 D 284 (312)
T ss_dssp S
T ss_pred C
Confidence 3
No 239
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=1.1e-40 Score=320.48 Aligned_cols=244 Identities=22% Similarity=0.315 Sum_probs=195.0
Q ss_pred HhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCcc------chHHHHHHHHHHHcCC--CCCceeEeeee
Q 011508 156 KATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRG------ASKSFIAECQALRSIR--HRNLVKIITSC 227 (484)
Q Consensus 156 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~--h~niv~~~~~~ 227 (484)
...++|++.+.||+|+||.||+|+.. .+++.||||++...... ....+.+|+.++++++ |+||+++++++
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~ 117 (320)
T 3a99_A 40 PLESQYQVGPLLGSGGFGSVYSGIRV--SDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWF 117 (320)
T ss_dssp CCTTTEEEEEECSSSSSCEEEEEEET--TTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEE
T ss_pred CccCceEEEEEEeeCCCeEEEEEEEC--CCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEE
Confidence 34578999999999999999999843 45789999999754321 1245678999999996 59999999995
Q ss_pred eeeccCCCceeeEEeecccC-CCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeec-C
Q 011508 228 VSVDFQGNDFEALVYELMVN-GSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLD-G 305 (484)
Q Consensus 228 ~~~~~~~~~~~~lv~e~~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~-~ 305 (484)
. ..+..++|+|++.+ ++|.+++... ..+++..++.++.|++.||+||| +.+|+||||||+||+++ +
T Consensus 118 ~-----~~~~~~lv~e~~~~~~~L~~~l~~~----~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~ 185 (320)
T 3a99_A 118 E-----RPDSFVLILERPEPVQDLFDFITER----GALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLN 185 (320)
T ss_dssp E-----CSSEEEEEEECCSSEEEHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETT
T ss_pred e-----cCCcEEEEEEcCCCCccHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHH---HCCcEeCCCCHHHEEEeCC
Confidence 4 44578999999976 8999999753 34899999999999999999999 89999999999999999 7
Q ss_pred CCceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCC-CcccceehhhHHHHHHHhCCCCCCCCccCC
Q 011508 306 ELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEV-STSGDVYSFGILLLEMFTGKGPTNEMFTGN 384 (484)
Q Consensus 306 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dvws~Gvvl~elltg~~p~~~~~~~~ 384 (484)
++.+||+|||++....... .....||..|+|||++.+..+ +.++||||||+++|||++|+.||....
T Consensus 186 ~~~~kL~Dfg~~~~~~~~~---------~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~--- 253 (320)
T 3a99_A 186 RGELKLIDFGSGALLKDTV---------YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE--- 253 (320)
T ss_dssp TTEEEECCCTTCEECCSSC---------BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH---
T ss_pred CCCEEEeeCcccccccccc---------ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh---
Confidence 8899999999998764321 123458999999998876665 788999999999999999999996421
Q ss_pred ccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 385 LTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
..... .... ...++.++.+++.+||+.||++|||++|+++.
T Consensus 254 ----~~~~~------------~~~~---------------------~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 254 ----EIIRG------------QVFF---------------------RQRVSSECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp ----HHHHC------------CCCC---------------------SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ----hhhcc------------cccc---------------------cccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000 0000 11124578899999999999999999999863
No 240
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=8.8e-40 Score=318.62 Aligned_cols=278 Identities=18% Similarity=0.201 Sum_probs=194.8
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--cchHHHHHHHHHHHcCCCCCceeEeeeeeeecc-CC
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--GASKSFIAECQALRSIRHRNLVKIITSCVSVDF-QG 234 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~-~~ 234 (484)
.++|.+.+.||+|+||.||+|+. ..+++.||||++..... ...+.+.+|+.+++.++||||+++++++..... ..
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 100 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAID--KRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRN 100 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEE--TTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGG
T ss_pred CceEEEeeeEecCCCeEEEEEEE--CCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccc
Confidence 46799999999999999999984 44678999999975432 224578899999999999999999998643221 11
Q ss_pred CceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEccc
Q 011508 235 NDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDF 314 (484)
Q Consensus 235 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 314 (484)
....++||||+. ++|.+++. ..+++..++.++.||+.||+||| +++|+||||||+||+++.++.+||+||
T Consensus 101 ~~~~~lv~e~~~-~~l~~~~~------~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Df 170 (353)
T 3coi_A 101 FYDFYLVMPFMQ-TDLQKIMG------LKFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDF 170 (353)
T ss_dssp CCCCEEEEECCS-EEGGGTTT------SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTCCEEECST
T ss_pred ceeEEEEecccc-CCHHHHhc------CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEeECCCCcEEEeec
Confidence 123589999996 68887764 24899999999999999999999 899999999999999999999999999
Q ss_pred CcccccccccccCCCCccccccccccccccCccccCC-CCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHh
Q 011508 315 GLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-SEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKE 393 (484)
Q Consensus 315 g~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 393 (484)
|++...... .....+|..|+|||++.+ ..++.++|||||||++|||++|+.||....... .+......
T Consensus 171 g~~~~~~~~----------~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~i~~~ 239 (353)
T 3coi_A 171 GLARHADAE----------MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILKV 239 (353)
T ss_dssp TCTTC------------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHH-HHHHHHHH
T ss_pred ccccCCCCC----------ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHH
Confidence 999865321 123468999999998876 678999999999999999999999997632111 11111110
Q ss_pred hc--chhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 394 AL--PERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 394 ~~--~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
.. +......+.......... .........-......++..+.+++.+||+.||++|||+.|+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 240 TGVPGTEFVQKLNDKAAKSYIQ----SLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp HCBCCHHHHTTCSCHHHHHHHH----TSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hCCCCHHHHHHHhhHHHHHHHH----hCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 00 000100000000000000 000000000000012336678999999999999999999999863
No 241
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=3.8e-40 Score=338.72 Aligned_cols=284 Identities=23% Similarity=0.249 Sum_probs=201.9
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeec-cCCCc
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVD-FQGND 236 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~-~~~~~ 236 (484)
++|++.+.||+|+||.||+|. +..++..||||+++.... ...+.+.+|++++++++||||+++++++.... +..+.
T Consensus 14 grY~i~~~LG~G~fG~Vyla~--~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~ 91 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWI--HQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPND 91 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCC--CTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTS
T ss_pred CCeEEEEEEeeCCCeEEEEEE--ECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCC
Confidence 689999999999999999998 445678899999875432 33467899999999999999999999864321 22356
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCc---eEEcc
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELT---AHVSD 313 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~---~kl~D 313 (484)
..++||||+++|+|.+++..... ...+++..++.++.|++.||+||| +.+|+||||||+||+++.++. +||+|
T Consensus 92 ~~~LVmEy~~ggsL~~~L~~~~~-~~~lse~~i~~I~~QLl~aL~yLH---s~gIVHrDLKP~NILl~~~g~~~~vKL~D 167 (676)
T 3qa8_A 92 LPLLAMEYCEGGDLRKYLNQFEN-CCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIID 167 (676)
T ss_dssp SCCCEEECCSSCBHHHHHHSSSC-TTCCCSSHHHHHHHHHHHHHHHHH---HTTBCCCCCCSTTEEEECCSSSCEEEECS
T ss_pred eEEEEEEeCCCCCHHHHHHhccc-CCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEeecCCCceeEEEcc
Confidence 78999999999999999985432 235888999999999999999999 899999999999999997664 99999
Q ss_pred cCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHh
Q 011508 314 FGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKE 393 (484)
Q Consensus 314 fg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 393 (484)
||.+....... ......||..|+|||++.+..++.++|||||||++|+|++|+.||..... ...|...
T Consensus 168 FG~a~~~~~~~--------~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~----~~~~~~~ 235 (676)
T 3qa8_A 168 LGYAKELDQGE--------LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ----PVQWHGK 235 (676)
T ss_dssp CCCCCBTTSCC--------CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCH----HHHSSTT
T ss_pred ccccccccccc--------ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccc----hhhhhhh
Confidence 99998764321 12235689999999999999999999999999999999999999965311 1111111
Q ss_pred hcchhhhh-hcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHH-----HHHHHHHH
Q 011508 394 ALPERLAE-IVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEV-----AAQLLSFR 467 (484)
Q Consensus 394 ~~~~~~~~-~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~ev-----l~~L~~i~ 467 (484)
........ .............. . ...........+..+.+++..||+.||++|||+.|+ .+.++.+.
T Consensus 236 i~~~~~~~~~~~~~l~g~~~~~~------~-lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL 308 (676)
T 3qa8_A 236 VREKSNEHIVVYDDLTGAVKFSS------V-LPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSIL 308 (676)
T ss_dssp CC------CCSCCCCSSSCCCCS------S-SCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHH
T ss_pred hhcccchhhhhhhhhcccccccc------c-cCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHH
Confidence 11110000 01111100000000 0 000011123457889999999999999999999984 45555544
No 242
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=1.7e-39 Score=316.80 Aligned_cols=280 Identities=20% Similarity=0.261 Sum_probs=197.3
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCC------ceeEeeeeeeec
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRN------LVKIITSCVSVD 231 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~~~~~~~~~~ 231 (484)
.++|++.+.||+|+||.||+|+.... .+..||+|+++.. ....+.+.+|+.++++++|++ ++.+++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~-~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~--- 92 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHAR-GKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFN--- 92 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTT-TTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEE---
T ss_pred cccEEEEEEeeccCCeEEEEEEecCC-CceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeee---
Confidence 46899999999999999999985432 2478999999743 233467888999999997665 788887743
Q ss_pred cCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeee--------
Q 011508 232 FQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLL-------- 303 (484)
Q Consensus 232 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll-------- 303 (484)
.....++||||+ ++++.+++.... ...+++.+++.++.||+.||+||| +++|+||||||+||++
T Consensus 93 --~~~~~~lv~e~~-~~~l~~~l~~~~--~~~~~~~~~~~i~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~~~ 164 (355)
T 2eu9_A 93 --FHGHMCIAFELL-GKNTFEFLKENN--FQPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETL 164 (355)
T ss_dssp --ETTEEEEEEECC-CCBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEESCCCEEEE
T ss_pred --eCCeEEEEEecc-CCChHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeccccccc
Confidence 345889999999 778888776432 235899999999999999999999 8999999999999999
Q ss_pred -----------cCCCceEEcccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHh
Q 011508 304 -----------DGELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFT 372 (484)
Q Consensus 304 -----------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~ellt 372 (484)
+.++.+||+|||++...... .....||..|+|||++.+..++.++|||||||++|||++
T Consensus 165 ~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~ 234 (355)
T 2eu9_A 165 YNEHKSCEEKSVKNTSIRVADFGSATFDHEH----------HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYR 234 (355)
T ss_dssp ECCC-CCCEEEESCCCEEECCCTTCEETTSC----------CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccCCCcEEEeecCcccccccc----------ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHh
Confidence 66789999999999764321 123468999999999999999999999999999999999
Q ss_pred CCCCCCCCccCCccHhHH--HHhhcchhhh-hhcCccccccccccc---chhhhh----h-hccccccchhHHHHHHHhH
Q 011508 373 GKGPTNEMFTGNLTLHNF--VKEALPERLA-EIVDPVLLVEREEGE---TSEANA----H-KQRTRSFGGKECLVSVLGI 441 (484)
Q Consensus 373 g~~p~~~~~~~~~~~~~~--~~~~~~~~~~-~~~d~~l~~~~~~~~---~~~~~~----~-~~~~~~~~~~~~~~~l~~l 441 (484)
|+.||....... .+... .....+.... ............... ...... . ...........+..++.++
T Consensus 235 g~~pf~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 313 (355)
T 2eu9_A 235 GFTLFQTHENRE-HLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDL 313 (355)
T ss_dssp SSCSCCCSSHHH-HHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHH
T ss_pred CCCCCCCCCHHH-HHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHH
Confidence 999997642211 11111 1111111111 100000000000000 000000 0 0000001123346789999
Q ss_pred hhccCCCCcCCCCCHHHHHH
Q 011508 442 GVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 442 ~~~cl~~dP~~RPt~~evl~ 461 (484)
+.+||+.||++|||+.|+++
T Consensus 314 i~~~L~~dP~~Rpt~~e~l~ 333 (355)
T 2eu9_A 314 MRRMLEFDPAQRITLAEALL 333 (355)
T ss_dssp HHHHTCSSTTTSCCHHHHTT
T ss_pred HHHHhcCChhhCcCHHHHhc
Confidence 99999999999999999985
No 243
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=6.2e-40 Score=327.94 Aligned_cols=256 Identities=23% Similarity=0.313 Sum_probs=182.2
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcC-CCCCceeEeeeeeeeccCCCce
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSI-RHRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 237 (484)
+.|.+.+.||+|+||+||.+... +++.||||++... ..+.+.+|+.++.++ +||||+++++++ ..+..
T Consensus 15 ~~~~~~~~LG~G~~g~V~~~~~~---~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~-----~~~~~ 83 (434)
T 2rio_A 15 NLVVSEKILGYGSSGTVVFQGSF---QGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSE-----TTDRF 83 (434)
T ss_dssp SCEEEEEEEEECSTTCEEEEEES---SSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEE-----ECSSE
T ss_pred heeeccCeEeeCCCeEEEEEEEE---CCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEE-----ecCCe
Confidence 34555688999999999865432 5789999998753 235678999999886 899999999884 34558
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCC---CCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCC--------
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRN---LNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGE-------- 306 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~---l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~-------- 306 (484)
.++||||+. |+|.+++......... .++..++.++.||+.||+||| +++|+||||||+||+++.+
T Consensus 84 ~~lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~~~~~~ 159 (434)
T 2rio_A 84 LYIALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQ 159 (434)
T ss_dssp EEEEECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEECCHHHHSCCT
T ss_pred EEEEEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCcccccccc
Confidence 899999995 6999999854322221 133456789999999999999 8999999999999999754
Q ss_pred -----CceEEcccCcccccccccccCCCCccccccccccccccCccccCC-------CCCCcccceehhhHHHHHHHh-C
Q 011508 307 -----LTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG-------SEVSTSGDVYSFGILLLEMFT-G 373 (484)
Q Consensus 307 -----~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-------~~~~~~~Dvws~Gvvl~ellt-g 373 (484)
+.+||+|||+++......... ........||+.|+|||++.+ ..++.++|||||||++|||+| |
T Consensus 160 ~~~~~~~~kL~DFG~a~~~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g 236 (434)
T 2rio_A 160 TGAENLRILISDFGLCKKLDSGQSSF---RTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKG 236 (434)
T ss_dssp TCCCSCEEEECCCTTCEECCC-----------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTS
T ss_pred cCCCceEEEEcccccceecCCCCccc---eeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCC
Confidence 489999999998764432111 111223569999999999865 578999999999999999999 9
Q ss_pred CCCCCCCccCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCC
Q 011508 374 KGPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRER 453 (484)
Q Consensus 374 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R 453 (484)
+.||....... ...... ..+.. .........++.++.+++.+||+.||++|
T Consensus 237 ~~Pf~~~~~~~---~~i~~~--------~~~~~------------------~~~~~~~~~~~~~~~~li~~~L~~dP~~R 287 (434)
T 2rio_A 237 KHPFGDKYSRE---SNIIRG--------IFSLD------------------EMKCLHDRSLIAEATDLISQMIDHDPLKR 287 (434)
T ss_dssp CCTTCSTTTHH---HHHHHT--------CCCCC------------------CCTTCCCHHHHHHHHHHHHHHTCSSGGGS
T ss_pred CCCCCCchhhH---HHHhcC--------CCCcc------------------cccccccccchHHHHHHHHHHhhCChhhC
Confidence 99996532111 111110 00000 00001123456789999999999999999
Q ss_pred CCHHHHHH
Q 011508 454 MNMEEVAA 461 (484)
Q Consensus 454 Pt~~evl~ 461 (484)
||+.||++
T Consensus 288 ps~~eil~ 295 (434)
T 2rio_A 288 PTAMKVLR 295 (434)
T ss_dssp CCHHHHHT
T ss_pred CCHHHHHh
Confidence 99999985
No 244
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=1.7e-39 Score=311.83 Aligned_cols=253 Identities=23% Similarity=0.281 Sum_probs=176.6
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccc-h-HHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGA-S-KSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~-~-~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
.++|++.+.||+|+||.||+|+.. .+++.||||++....... . +.+.++..+++.++||||+++++++. .+
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~-----~~ 96 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFR--KTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFI-----TN 96 (318)
T ss_dssp GGGEEEEEEC------CEEEEEET--TTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEE-----CS
T ss_pred hccccccceeeecCCeeEEEEEEe--cCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEe-----cC
Confidence 467888999999999999999954 357889999997654322 2 23444556788889999999999864 34
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CeeecCCCCCCeeecCCCceEEccc
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCET-PIVHCDLKPSNVLLDGELTAHVSDF 314 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~dlk~~NIll~~~~~~kl~Df 314 (484)
+..++||||+ ++.+..+.... ...+++..++.++.|++.||+||| ++ +|+||||||+||+++.++.+||+||
T Consensus 97 ~~~~lv~e~~-~~~~~~l~~~~---~~~~~~~~~~~~~~~i~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~df 169 (318)
T 2dyl_A 97 TDVFIAMELM-GTCAEKLKKRM---QGPIPERILGKMTVAIVKALYYLK---EKHGVIHRDVKPSNILLDERGQIKLCDF 169 (318)
T ss_dssp SEEEEEECCC-SEEHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHH---HHHCCCCCCCCGGGEEECTTSCEEECCC
T ss_pred CcEEEEEecc-CCcHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHH---hhCCEEeCCCCHHHEEECCCCCEEEEEC
Confidence 5889999999 55666655432 235899999999999999999999 64 9999999999999999999999999
Q ss_pred CcccccccccccCCCCccccccccccccccCccccC-----CCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhH
Q 011508 315 GLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGM-----GSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHN 389 (484)
Q Consensus 315 g~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~ 389 (484)
|++....... ......++..|+|||++. ...++.++||||||+++|||++|+.||.........+..
T Consensus 170 g~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~ 241 (318)
T 2dyl_A 170 GISGRLVDDK--------AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTK 241 (318)
T ss_dssp TTC----------------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHH
T ss_pred CCchhccCCc--------cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHH
Confidence 9997653321 112345899999999984 456889999999999999999999999753221111111
Q ss_pred HHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 390 FVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 390 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
.... ..+.+.. ...++..+.+++.+||+.||.+|||++|+++.
T Consensus 242 ~~~~---------~~~~~~~---------------------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 242 VLQE---------EPPLLPG---------------------HMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp HHHS---------CCCCCCS---------------------SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred Hhcc---------CCCCCCc---------------------cCCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 1100 0000000 01125578899999999999999999999863
No 245
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.7e-39 Score=322.36 Aligned_cols=252 Identities=24% Similarity=0.282 Sum_probs=180.3
Q ss_pred hcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcC-CCCCceeEeeeeeeeccCCC
Q 011508 157 ATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSI-RHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 157 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~ 235 (484)
...+|.+.+.||+|+||+||..... +++.||||++..... ..+.+|+++++.+ +||||+++++++. +.
T Consensus 22 ~~~~y~~~~~LG~G~~G~V~~~~~~---~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~-----~~ 90 (432)
T 3p23_A 22 GKISFCPKDVLGHGAEGTIVYRGMF---DNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEK-----DR 90 (432)
T ss_dssp TTEEEEEEEEEEECGGGCEEEEEES---SSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEE-----ET
T ss_pred ccEEEecCCeeecCcCEEEEEEEEe---CCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEe-----cC
Confidence 3456888899999999996543322 467899999865432 3356899999999 8999999998853 44
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecC-----CCceE
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDG-----ELTAH 310 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~-----~~~~k 310 (484)
...++||||+. |+|.+++..... ...+..++.++.||+.||+||| +++|+||||||+||+++. ...+|
T Consensus 91 ~~~~lv~E~~~-g~L~~~l~~~~~---~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NIll~~~~~~~~~~~k 163 (432)
T 3p23_A 91 QFQYIAIELCA-ATLQEYVEQKDF---AHLGLEPITLLQQTTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAM 163 (432)
T ss_dssp TEEEEEEECCS-EEHHHHHHSSSC---CCCSSCHHHHHHHHHHHHHHHH---HTTCCCCCCSTTSEEECCCBTTTBCCEE
T ss_pred CEEEEEEECCC-CCHHHHHHhcCC---CccchhHHHHHHHHHHHHHHHH---HCcCEeCCCCHHHEEEecCCCCCceeEE
Confidence 57899999995 699999974432 2444456789999999999999 899999999999999943 33688
Q ss_pred EcccCcccccccccccCCCCccccccccccccccCccccC---CCCCCcccceehhhHHHHHHHh-CCCCCCCCccCCcc
Q 011508 311 VSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGM---GSEVSTSGDVYSFGILLLEMFT-GKGPTNEMFTGNLT 386 (484)
Q Consensus 311 l~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dvws~Gvvl~ellt-g~~p~~~~~~~~~~ 386 (484)
|+|||+++........ ........||+.|+|||++. ...++.++|||||||++|||++ |..||......
T Consensus 164 L~DFG~a~~~~~~~~~----~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~--- 236 (432)
T 3p23_A 164 ISDFGLCKKLAVGRHS----FSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR--- 236 (432)
T ss_dssp ECCTTEEECC----------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH---
T ss_pred EecccceeeccCCCcc----eeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH---
Confidence 9999999876433211 11223456999999999987 4567889999999999999999 99998542111
Q ss_pred HhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHH
Q 011508 387 LHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAA 461 (484)
Q Consensus 387 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~ 461 (484)
............... ........+.+++.+||+.||++|||+.||++
T Consensus 237 ---~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 237 ---QANILLGACSLDCLH-------------------------PEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp ---HHHHHTTCCCCTTSC-------------------------TTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ---HHHHHhccCCccccC-------------------------ccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 000000000000000 01122556789999999999999999999984
No 246
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=2.4e-39 Score=305.43 Aligned_cols=235 Identities=10% Similarity=0.038 Sum_probs=181.3
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCcc---chHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCC
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRG---ASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGN 235 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~ 235 (484)
++|++.+.||+|+||.||+|+. ..+++.||||++...... ..+.+.+|+.++.+++||||+++++++.. +
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~--~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~-----~ 103 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALD--TALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHT-----R 103 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEE--TTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-----T
T ss_pred CcEEEEEEEcccCCeEEEEEEe--cCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEE-----C
Confidence 6799999999999999999995 445789999999765432 23678999999999999999999998643 4
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
+..++||||+++++|.+++... ....++..++.|++.||+||| +++|+||||||+||+++.++.+||++++
T Consensus 104 ~~~~lv~e~~~g~~L~~~l~~~------~~~~~~~~i~~ql~~aL~~lH---~~givH~Dikp~NIll~~~g~~kl~~~~ 174 (286)
T 3uqc_A 104 AGGLVVAEWIRGGSLQEVADTS------PSPVGAIRAMQSLAAAADAAH---RAGVALSIDHPSRVRVSIDGDVVLAYPA 174 (286)
T ss_dssp TEEEEEEECCCEEEHHHHHTTC------CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEETTSCEEECSCC
T ss_pred CcEEEEEEecCCCCHHHHHhcC------CChHHHHHHHHHHHHHHHHHH---HCCCccCCCCcccEEEcCCCCEEEEecc
Confidence 5789999999999999999521 355678899999999999999 8999999999999999999999998544
Q ss_pred cccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhc
Q 011508 316 LAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEAL 395 (484)
Q Consensus 316 ~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~ 395 (484)
|++ .++.++|||||||++|||+||+.||........... .
T Consensus 175 ---------------------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~-~----- 214 (286)
T 3uqc_A 175 ---------------------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAP-A----- 214 (286)
T ss_dssp ---------------------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEE-C-----
T ss_pred ---------------------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHH-H-----
Confidence 222 368899999999999999999999976432210000 0
Q ss_pred chhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHHHHHHHHHHh
Q 011508 396 PERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQLLSFRNKLV 471 (484)
Q Consensus 396 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~L~~i~~~~~ 471 (484)
...+...... ......+++.++.+++.+||+.||++| |+.|+++.|+.+.....
T Consensus 215 ----~~~~~~~~~~-----------------~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~~ 268 (286)
T 3uqc_A 215 ----ERDTAGQPIE-----------------PADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVAD 268 (286)
T ss_dssp ----CBCTTSCBCC-----------------HHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC---
T ss_pred ----HHHhccCCCC-----------------hhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccCC
Confidence 0000000000 000012235678999999999999999 99999999999875543
No 247
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=1.9e-39 Score=322.38 Aligned_cols=250 Identities=16% Similarity=0.137 Sum_probs=182.3
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc---cchHHHHHHHHHHHcCCC-CCceeEe---------
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR---GASKSFIAECQALRSIRH-RNLVKII--------- 224 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h-~niv~~~--------- 224 (484)
+..|...+.||+|+||.||+|+.. .+++.||||++..... ...+.+.+|+.+++.++| +|.....
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~--~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~ 154 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQ--ETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPF 154 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEET--TTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCC
T ss_pred ceeEEEecccccCCCEEEEEEEec--CCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccch
Confidence 345777889999999999999944 4578999999874332 225779999999999987 3221111
Q ss_pred eeeee------------eccCCCceeeEEeecccCCCHHHHHhhc---CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC
Q 011508 225 TSCVS------------VDFQGNDFEALVYELMVNGSLEEWLHLN---RDAPRNLNLLQRLSIAVDVASTLEYLHHYCET 289 (484)
Q Consensus 225 ~~~~~------------~~~~~~~~~~lv~e~~~~gsL~~~l~~~---~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~ 289 (484)
..+.. .........+++|+++ +++|.+++... ......+++..++.++.|++.||+||| ++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~ 230 (413)
T 3dzo_A 155 DLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HY 230 (413)
T ss_dssp EEEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HT
T ss_pred hhcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHH---hC
Confidence 10000 0000012356777776 78999988522 223445888999999999999999999 89
Q ss_pred CeeecCCCCCCeeecCCCceEEcccCcccccccccccCCCCccccccccccccccCcccc----------CCCCCCcccc
Q 011508 290 PIVHCDLKPSNVLLDGELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYG----------MGSEVSTSGD 359 (484)
Q Consensus 290 ~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~----------~~~~~~~~~D 359 (484)
+|+||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ ....++.++|
T Consensus 231 ~iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~----------~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~D 299 (413)
T 3dzo_A 231 GLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS----------AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFD 299 (413)
T ss_dssp TEECSCCCGGGEEECTTCCEEECCGGGCEETTEE----------ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHH
T ss_pred CcccCCcccceEEEecCCeEEEEeccceeecCCc----------cccCCC-CceeCchhhhccccccccccCcCCCchhh
Confidence 9999999999999999999999999998865322 223457 999999998 6667899999
Q ss_pred eehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHH
Q 011508 360 VYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVL 439 (484)
Q Consensus 360 vws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 439 (484)
||||||++|||+||+.||........ .+..+.. ...++..+.
T Consensus 300 vwSlGvil~elltg~~Pf~~~~~~~~-----------------~~~~~~~---------------------~~~~~~~~~ 341 (413)
T 3dzo_A 300 TWTLGLAIYWIWCADLPNTDDAALGG-----------------SEWIFRS---------------------CKNIPQPVR 341 (413)
T ss_dssp HHHHHHHHHHHHHSSCCCCTTGGGSC-----------------SGGGGSS---------------------CCCCCHHHH
T ss_pred HHHHHHHHHHHHHCCCCCCCcchhhh-----------------HHHHHhh---------------------cccCCHHHH
Confidence 99999999999999999975321110 0000000 001245789
Q ss_pred hHhhccCCCCcCCCCCHHHHHHH
Q 011508 440 GIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 440 ~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
+++.+||+.||++|||+.|+++.
T Consensus 342 ~li~~~l~~dP~~Rpt~~~~l~~ 364 (413)
T 3dzo_A 342 ALLEGFLRYPKEDRLLPLQAMET 364 (413)
T ss_dssp HHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHHHHHccCChhhCcCHHHHHhC
Confidence 99999999999999999988653
No 248
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=5.7e-39 Score=338.82 Aligned_cols=250 Identities=23% Similarity=0.281 Sum_probs=195.8
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc-cchHHHHHHHHHHHcCCCCCceeEeeeeeeeccCCCc
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR-GASKSFIAECQALRSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
.++|++.+.||+|+||.||+|+.... +++.||||++..... .....+.+|++++++++||||+++++++...+..+..
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 157 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNV-NGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDP 157 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGG-TTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCC-CCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCc
Confidence 36899999999999999999986432 368899999865432 3345788999999999999999999998765533333
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCc
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGL 316 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 316 (484)
..++||||+++++|.+++.. .+++.+++.++.||+.||.||| +++|+||||||+||+++.+ .+||+|||+
T Consensus 158 ~~~lv~E~~~g~~L~~~~~~------~l~~~~~~~~~~qi~~aL~~lH---~~giiHrDlkp~NIll~~~-~~kl~DFG~ 227 (681)
T 2pzi_A 158 VGYIVMEYVGGQSLKRSKGQ------KLPVAEAIAYLLEILPALSYLH---SIGLVYNDLKPENIMLTEE-QLKLIDLGA 227 (681)
T ss_dssp EEEEEEECCCCEECC----C------CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECSS-CEEECCCTT
T ss_pred eeEEEEEeCCCCcHHHHHhC------CCCHHHHHHHHHHHHHHHHHHH---HCCCeecccChHHeEEeCC-cEEEEeccc
Confidence 46999999999999987752 5899999999999999999999 8999999999999999986 899999999
Q ss_pred ccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHhhcc
Q 011508 317 AKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKEALP 396 (484)
Q Consensus 317 a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 396 (484)
++..... ....||+.|+|||++.+.. +.++|||||||++|+|++|..||.........
T Consensus 228 a~~~~~~-----------~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~~---------- 285 (681)
T 2pzi_A 228 VSRINSF-----------GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDGLP---------- 285 (681)
T ss_dssp CEETTCC-----------SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSSCC----------
T ss_pred chhcccC-----------CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccccccc----------
Confidence 9865321 2346899999999887654 88999999999999999999887642211100
Q ss_pred hhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCC-CHHHHHHHHHHHHHHH
Q 011508 397 ERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERM-NMEEVAAQLLSFRNKL 470 (484)
Q Consensus 397 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-t~~evl~~L~~i~~~~ 470 (484)
. . .....+...+.+++.+||+.||++|| +++++...|..+....
T Consensus 286 ~-----------~-------------------~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~~ 330 (681)
T 2pzi_A 286 E-----------D-------------------DPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLREV 330 (681)
T ss_dssp T-----------T-------------------CHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHHHH
T ss_pred c-----------c-------------------ccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHHHHh
Confidence 0 0 00112245688999999999999999 5677777777765444
No 249
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=9.7e-38 Score=296.96 Aligned_cols=236 Identities=20% Similarity=0.282 Sum_probs=178.9
Q ss_pred CCCCcc-CccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHH-HcCCCCCceeEeeeeeeeccCCCc
Q 011508 159 DGFSLE-NLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQAL-RSIRHRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 159 ~~~~~~-~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l-~~l~h~niv~~~~~~~~~~~~~~~ 236 (484)
++|.+. +.||+|+||.||+|... .+++.||+|+++. ...+.+|+.++ +.++||||+++++++... ..+..
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~--~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~-~~~~~ 88 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNK--RTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENL-YAGRK 88 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEET--TTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEE-ETTEE
T ss_pred cchhhcCcccccCCCeEEEEEEEc--CCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhh-cCCCc
Confidence 456666 78999999999999843 4678999999863 25677889888 556999999999987542 23355
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecC---CCceEEcc
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDG---ELTAHVSD 313 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~---~~~~kl~D 313 (484)
..++||||+++|+|.+++.... ...+++..++.++.|++.||+||| +++|+||||||+||+++. ++.+||+|
T Consensus 89 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~kl~D 163 (299)
T 3m2w_A 89 CLLIVMECLDGGELFSRIQDRG--DQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTD 163 (299)
T ss_dssp EEEEEECCCCSCBHHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECC
T ss_pred eEEEEEeecCCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEecCCCCCcEEEec
Confidence 7899999999999999998543 245899999999999999999999 899999999999999998 78999999
Q ss_pred cCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccCCccHhHHHHh
Q 011508 314 FGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTGNLTLHNFVKE 393 (484)
Q Consensus 314 fg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~~~~~~~~~~~ 393 (484)
||++.... +..++.++|||||||++|||++|+.||.........
T Consensus 164 fg~a~~~~-----------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~------- 207 (299)
T 3m2w_A 164 FGFAKETT-----------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS------- 207 (299)
T ss_dssp CTTCEECT-----------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC--------------
T ss_pred cccccccc-----------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh-------
Confidence 99886431 234788999999999999999999999653211100
Q ss_pred hcchhhhhhcCcccccccccccchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHHHH
Q 011508 394 ALPERLAEIVDPVLLVEREEGETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVAAQ 462 (484)
Q Consensus 394 ~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl~~ 462 (484)
......+....... .......++.++.+++.+||+.||++|||+.|+++.
T Consensus 208 --~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 208 --PGMKTRIRMGQYEF-----------------PNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp --CCSCCSSCTTCCSS-----------------CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred --HHHHHHHhhccccC-----------------CchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 00000000000000 000012336678999999999999999999999874
No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=4.5e-37 Score=297.40 Aligned_cols=248 Identities=15% Similarity=0.146 Sum_probs=183.0
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--------cchHHHHHHHHHHHcCC---------CCCc
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--------GASKSFIAECQALRSIR---------HRNL 220 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~---------h~ni 220 (484)
.++|++.+.||+|+||.||+|+. +++.||||++..... ...+.+.+|+.+++.++ ||||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~----~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~ni 94 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA----DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGF 94 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE----TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCB
T ss_pred cccchheeeecccCceEEEEEEe----CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCch
Confidence 35688899999999999999985 358999999986532 22367889999998885 7888
Q ss_pred eeEeeeeeeec-------------------------cCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHH
Q 011508 221 VKIITSCVSVD-------------------------FQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVD 275 (484)
Q Consensus 221 v~~~~~~~~~~-------------------------~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ 275 (484)
+++.+.+.... +......++||||+++|++.+.+.. ..+++..++.++.|
T Consensus 95 v~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-----~~~~~~~~~~i~~q 169 (336)
T 2vuw_A 95 IGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-----KLSSLATAKSILHQ 169 (336)
T ss_dssp CCEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-----TCCCHHHHHHHHHH
T ss_pred hhhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-----cCCCHHHHHHHHHH
Confidence 77777643211 1135688999999999977666642 34899999999999
Q ss_pred HHHHHHHHHhcCCCCeeecCCCCCCeeecCCC--------------------ceEEcccCcccccccccccCCCCccccc
Q 011508 276 VASTLEYLHHYCETPIVHCDLKPSNVLLDGEL--------------------TAHVSDFGLAKFLPEAANNLSSNQSSSV 335 (484)
Q Consensus 276 i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~~ 335 (484)
|+.||+|||+ +++|+||||||+|||++.++ .+||+|||+++.....
T Consensus 170 i~~aL~~lH~--~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------------ 235 (336)
T 2vuw_A 170 LTASLAVAEA--SLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------------ 235 (336)
T ss_dssp HHHHHHHHHH--HHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------------
T ss_pred HHHHHHHHHH--hCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------------
Confidence 9999999993 36899999999999999887 8999999999865321
Q ss_pred cccccccccCccccCCCCCCcccceehhhHH-HHHHHhCCCCCCCCccCCccHhHHHHhhcchhhhhhcCcccccccccc
Q 011508 336 GVKGTVGYAAPEYGMGSEVSTSGDVYSFGIL-LLEMFTGKGPTNEMFTGNLTLHNFVKEALPERLAEIVDPVLLVEREEG 414 (484)
Q Consensus 336 ~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvv-l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~ 414 (484)
...||+.|+|||++.+.. +.++||||+|++ .+++++|..||... .|..... +.+....... .
T Consensus 236 ~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~--------~~~~~~~-~~~~~~~~~~--~----- 298 (336)
T 2vuw_A 236 IVVFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNV--------LWLHYLT-DKMLKQMTFK--T----- 298 (336)
T ss_dssp EEECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHH--------HHHHHHH-HHHHHTCCCS--S-----
T ss_pred cEEEeecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcch--------hhhhHHH-HhhhhhhccC--c-----
Confidence 236899999999998766 899999998777 77788899997431 1111110 0100000000 0
Q ss_pred cchhhhhhhccccccchhHHHHHHHhHhhccCCCCcCCCCCHHHHH
Q 011508 415 ETSEANAHKQRTRSFGGKECLVSVLGIGVICSSELPRERMNMEEVA 460 (484)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPt~~evl 460 (484)
.........++.++.+|+.+||+.| |++|++
T Consensus 299 ----------~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 299 ----------KCNTPAMKQIKRKIQEFHRTMLNFS-----SATDLL 329 (336)
T ss_dssp ----------CCCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHH
T ss_pred ----------ccchhhhhhcCHHHHHHHHHHhccC-----CHHHHH
Confidence 0000013456788999999999976 898887
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.96 E-value=1.7e-30 Score=266.80 Aligned_cols=186 Identities=16% Similarity=0.040 Sum_probs=126.4
Q ss_pred ccccccceeEEEEEEcCCCCeeEEEEEEeeccCc----------cchHHHHHHHHHHHcC-CCCCceeEeeeeeeeccCC
Q 011508 166 LIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR----------GASKSFIAECQALRSI-RHRNLVKIITSCVSVDFQG 234 (484)
Q Consensus 166 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~----------~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~ 234 (484)
..+.|++|.+..++.. -.+..+++|++..... ...++|.+|+++|+++ .|+||++++++ +++
T Consensus 241 ~~~~~~~~~h~~~rr~--~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~-----~ed 313 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRY--FFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAH-----GEN 313 (569)
T ss_dssp C-C--------CCEEE--EECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEE-----EEC
T ss_pred ccccCCcccccccccc--cccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEE-----EEE
Confidence 3455666555544321 1356799999975421 1225699999999999 79999999999 566
Q ss_pred CceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEccc
Q 011508 235 NDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDF 314 (484)
Q Consensus 235 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 314 (484)
+...||||||++|++|.+++... .+++.. .|+.||+.||+|+| +++||||||||+|||+++++.+||+||
T Consensus 314 ~~~~yLVMEyv~G~~L~d~i~~~----~~l~~~---~I~~QIl~AL~ylH---~~GIIHRDIKPeNILL~~dg~vKL~DF 383 (569)
T 4azs_A 314 AQSGWLVMEKLPGRLLSDMLAAG----EEIDRE---KILGSLLRSLAALE---KQGFWHDDVRPWNVMVDARQHARLIDF 383 (569)
T ss_dssp SSEEEEEEECCCSEEHHHHHHTT----CCCCHH---HHHHHHHHHHHHHH---HTTCEESCCCGGGEEECTTSCEEECCC
T ss_pred CCEEEEEEecCCCCcHHHHHHhC----CCCCHH---HHHHHHHHHHHHHH---HCCceeccCchHhEEECCCCCEEEeec
Confidence 77999999999999999999743 345554 48899999999999 999999999999999999999999999
Q ss_pred CcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCC
Q 011508 315 GLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGP 376 (484)
Q Consensus 315 g~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p 376 (484)
|+|+...... ......+||+.|+|||++.+ .+..++|+||+|++++++.++..+
T Consensus 384 GlAr~~~~~~-------~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 384 GSIVTTPQDC-------SWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp TTEESCC----------CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred ccCeeCCCCC-------ccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 9998764322 22234679999999999875 467789999999999888766544
No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.94 E-value=5.8e-28 Score=246.57 Aligned_cols=191 Identities=17% Similarity=0.133 Sum_probs=141.7
Q ss_pred CccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCcc--------chHHHHHHHHHHHcCCCCCceeEeeeeeeeccC
Q 011508 162 SLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRG--------ASKSFIAECQALRSIRHRNLVKIITSCVSVDFQ 233 (484)
Q Consensus 162 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~ 233 (484)
...+.||+|+||.||+|.+. +..+++|+....... ..+.+.+|++++++++||||+++..++..
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~~----~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~---- 410 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSYL----DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVD---- 410 (540)
T ss_dssp ---------CCEEEEEEECS----SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEE----
T ss_pred CCCCEEeeCCCEEEEEEEEC----CCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEe----
Confidence 34578999999999999643 466888876543211 12457899999999999999965555432
Q ss_pred CCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcc
Q 011508 234 GNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSD 313 (484)
Q Consensus 234 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~D 313 (484)
.+..++||||+++++|.+++.. +..++.|+++||+||| +++|+||||||+|||++. .+||+|
T Consensus 411 -~~~~~lVmE~~~ggsL~~~l~~------------~~~i~~qi~~aL~~LH---~~gIiHrDiKp~NILl~~--~~kL~D 472 (540)
T 3en9_A 411 -LDNKRIMMSYINGKLAKDVIED------------NLDIAYKIGEIVGKLH---KNDVIHNDLTTSNFIFDK--DLYIID 472 (540)
T ss_dssp -TTTTEEEEECCCSEEHHHHSTT------------CTHHHHHHHHHHHHHH---HTTEECTTCCTTSEEESS--SEEECC
T ss_pred -CCccEEEEECCCCCCHHHHHHH------------HHHHHHHHHHHHHHHH---HCcCccCCCCHHHEEECC--eEEEEE
Confidence 2356999999999999999873 4579999999999999 899999999999999998 999999
Q ss_pred cCcccccccccccCCCCccccccccccccccCccccCC--CCCCcccceehhhHHHHHHHhCCCCCC
Q 011508 314 FGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMG--SEVSTSGDVYSFGILLLEMFTGKGPTN 378 (484)
Q Consensus 314 fg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~~Dvws~Gvvl~elltg~~p~~ 378 (484)
||+++....................||+.|+|||++.. ..|+..+|+||..+-..+-+.++.+|.
T Consensus 473 FGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 473 FGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp CTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred CccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 99999875432110000001234579999999999876 568889999999999988888777653
No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.89 E-value=2.4e-24 Score=201.85 Aligned_cols=143 Identities=20% Similarity=0.206 Sum_probs=113.3
Q ss_pred cHHhHHHhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc------------------cchHHHHHHHHH
Q 011508 150 SYQNLFKATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR------------------GASKSFIAECQA 211 (484)
Q Consensus 150 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~e~~~ 211 (484)
....+......|.+.+.||+|+||.||+|.. .+++.||+|+++.... .....+.+|+.+
T Consensus 81 ~l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~---~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~ 157 (282)
T 1zar_A 81 SLHRLVRSGKVDAIGKLMGEGKESAVFNCYS---EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRA 157 (282)
T ss_dssp HHHHHHHTTSCSEEEEEEEECSSEEEEEEEE---TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCeEEEecCEeccCCCceEEEEEe---CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHH
Confidence 3445556667788889999999999999996 3578999999864321 123568899999
Q ss_pred HHcCCCCCceeEeeeeeeeccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCe
Q 011508 212 LRSIRHRNLVKIITSCVSVDFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPI 291 (484)
Q Consensus 212 l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i 291 (484)
+++++ | +++.+++. . +..++||||+++++|.+ +. . .....++.|++.||+||| +.+|
T Consensus 158 l~~l~--~-~~v~~~~~-~-----~~~~lvmE~~~g~~L~~-l~--------~--~~~~~i~~qi~~~l~~lH---~~gi 214 (282)
T 1zar_A 158 LQKLQ--G-LAVPKVYA-W-----EGNAVLMELIDAKELYR-VR--------V--ENPDEVLDMILEEVAKFY---HRGI 214 (282)
T ss_dssp HHHTT--T-SSSCCEEE-E-----ETTEEEEECCCCEEGGG-CC--------C--SCHHHHHHHHHHHHHHHH---HTTE
T ss_pred HHhcc--C-CCcCeEEe-c-----cceEEEEEecCCCcHHH-cc--------h--hhHHHHHHHHHHHHHHHH---HCCC
Confidence 99999 4 55555431 1 35699999999999988 42 1 124469999999999999 8999
Q ss_pred eecCCCCCCeeecCCCceEEcccCcccc
Q 011508 292 VHCDLKPSNVLLDGELTAHVSDFGLAKF 319 (484)
Q Consensus 292 vH~dlk~~NIll~~~~~~kl~Dfg~a~~ 319 (484)
+||||||+||+++ ++.+||+|||+++.
T Consensus 215 iHrDlkp~NILl~-~~~vkl~DFG~a~~ 241 (282)
T 1zar_A 215 VHGDLSQYNVLVS-EEGIWIIDFPQSVE 241 (282)
T ss_dssp ECSCCSTTSEEEE-TTEEEECCCTTCEE
T ss_pred EeCCCCHHHEEEE-CCcEEEEECCCCeE
Confidence 9999999999999 99999999999873
No 254
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.79 E-value=2.2e-19 Score=166.04 Aligned_cols=146 Identities=21% Similarity=0.155 Sum_probs=107.5
Q ss_pred hHHHhcCCCCccCccccccceeEEEEEEcCCCCeeE--EEEEEeeccCccc------------------------hHHHH
Q 011508 153 NLFKATDGFSLENLIGAGSFGSVYKGIFDHDDHETL--VAVKVLNLQHRGA------------------------SKSFI 206 (484)
Q Consensus 153 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~--vavK~~~~~~~~~------------------------~~~~~ 206 (484)
.+.....-|++.+.||+|+||.||+|.... +++. ||||+++...... ...+.
T Consensus 41 ~~~~~~~~~~i~~~ig~G~~g~Vy~a~~~~--~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (258)
T 1zth_A 41 KLSAKGYITAMGGVISTGKEANVFYADGVF--DGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTE 118 (258)
T ss_dssp HHHHTTSEEEEEEEEEECSSEEEEEEEEEE--TTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHH
T ss_pred HHHhCCCchhhCCEEeecceEEEEEEEEcC--CCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHH
Confidence 333333346788999999999999998622 4567 9999875432110 12578
Q ss_pred HHHHHHHcCCCCCc--eeEeeeeeeeccCCCceeeEEeecccC-C----CHHHHHhhcCCCCCCCCHHHHHHHHHHHHHH
Q 011508 207 AECQALRSIRHRNL--VKIITSCVSVDFQGNDFEALVYELMVN-G----SLEEWLHLNRDAPRNLNLLQRLSIAVDVAST 279 (484)
Q Consensus 207 ~e~~~l~~l~h~ni--v~~~~~~~~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~ 279 (484)
+|+.++.++.|+++ ..++.. ...++||||+.+ | +|.++... .++..+..++.|++.+
T Consensus 119 ~E~~~l~~l~~~~i~~p~~~~~---------~~~~lVmE~~g~~g~~~~~L~~~~~~-------~~~~~~~~i~~qi~~~ 182 (258)
T 1zth_A 119 KEFRNLERAKEAGVSVPQPYTY---------MKNVLLMEFIGEDELPAPTLVELGRE-------LKELDVEGIFNDVVEN 182 (258)
T ss_dssp HHHHHHHHHHHTTCCCCCEEEE---------ETTEEEEECCEETTEECCBHHHHGGG-------GGGSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCeEEEc---------CCCEEEEEecCCCCCccccHHHHhhc-------cChHHHHHHHHHHHHH
Confidence 99999999988764 333322 245899999942 4 77776532 2234567899999999
Q ss_pred HHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccccc
Q 011508 280 LEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFL 320 (484)
Q Consensus 280 l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~ 320 (484)
|.|||. ..+|+||||||+|||++. .++|+|||+|...
T Consensus 183 l~~lH~--~~givHrDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 183 VKRLYQ--EAELVHADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp HHHHHH--TSCEECSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred HHHHHH--HCCEEeCCCCHHHEEEcC--cEEEEECcccccC
Confidence 999995 579999999999999998 8999999999754
No 255
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.68 E-value=1.1e-17 Score=160.66 Aligned_cols=144 Identities=16% Similarity=0.182 Sum_probs=100.9
Q ss_pred HhHHHhcCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc--------------cchHH--------HHHHH
Q 011508 152 QNLFKATDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR--------------GASKS--------FIAEC 209 (484)
Q Consensus 152 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--------------~~~~~--------~~~e~ 209 (484)
..+.....-|++.+.||+|++|.||+|... +++.||||+++.... ..... ..+|.
T Consensus 88 ~~L~~rg~iY~I~~~IG~Gk~a~VY~a~d~---~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~ 164 (397)
T 4gyi_A 88 HTHAARKDVYSVGSRIGVGKESDIMIVADE---KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEF 164 (397)
T ss_dssp HHHHHTTSCSEEEEEEEECSSEEEEEEECT---TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCEEEecCEeeeCCceEEEEEECC---CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHH
Confidence 344444455899999999999999999843 578899999763210 00111 23455
Q ss_pred HHHHcCCCCCce--eEeeeeeeeccCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC
Q 011508 210 QALRSIRHRNLV--KIITSCVSVDFQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYC 287 (484)
Q Consensus 210 ~~l~~l~h~niv--~~~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ 287 (484)
..|.++.+.++. ..++. ...++||||++|++|.++.. . .....++.|++.+|.+||
T Consensus 165 ~nL~rL~~~gv~vp~p~~~---------~~~~LVME~i~G~~L~~l~~--------~--~~~~~l~~qll~~l~~lH--- 222 (397)
T 4gyi_A 165 AFMKALYEEGFPVPEPIAQ---------SRHTIVMSLVDALPMRQVSS--------V--PDPASLYADLIALILRLA--- 222 (397)
T ss_dssp HHHHHHHHTTCSCCCEEEE---------ETTEEEEECCSCEEGGGCCC--------C--SCHHHHHHHHHHHHHHHH---
T ss_pred HHHHHHHhcCCCCCeeeec---------cCceEEEEecCCccHhhhcc--------c--HHHHHHHHHHHHHHHHHH---
Confidence 666666444332 11111 13479999999888865432 1 123567899999999999
Q ss_pred CCCeeecCCCCCCeeecCCC----------ceEEcccCccccc
Q 011508 288 ETPIVHCDLKPSNVLLDGEL----------TAHVSDFGLAKFL 320 (484)
Q Consensus 288 ~~~ivH~dlk~~NIll~~~~----------~~kl~Dfg~a~~~ 320 (484)
..+||||||||.|||+++++ .+.|+||+.+...
T Consensus 223 ~~gIVHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 223 KHGLIHGDFNEFNILIREEKDAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp HTTEECSCCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCEET
T ss_pred HCCCcCCCCCHHHEEEeCCCCcccccccccceEEEEeCCcccC
Confidence 88999999999999998776 3899999987643
No 256
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.43 E-value=1.1e-13 Score=147.82 Aligned_cols=83 Identities=35% Similarity=0.606 Sum_probs=75.2
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccccccccCcccccCCCccccC
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIKGVFSNSSAISLDGNVNLCG 80 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~l~g 80 (484)
|++|+|+|.||.++++|++|+.||||+|+|+|.||..++++++|+.||||+|+|+|.+|..+.+..+...++.||++|||
T Consensus 663 Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg 742 (768)
T 3rgz_A 663 LGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCG 742 (768)
T ss_dssp CCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEES
T ss_pred CcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcC
Confidence 68899999999999999999999999999999999999999999999999999999999888888888899999999999
Q ss_pred CCc
Q 011508 81 GIS 83 (484)
Q Consensus 81 ~~~ 83 (484)
.+.
T Consensus 743 ~~l 745 (768)
T 3rgz_A 743 YPL 745 (768)
T ss_dssp TTS
T ss_pred CCC
Confidence 764
No 257
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.32 E-value=3.7e-12 Score=117.80 Aligned_cols=144 Identities=15% Similarity=0.090 Sum_probs=108.6
Q ss_pred cCCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCC-CCCceeEeeeeeeeccCCCc
Q 011508 158 TDGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIR-HRNLVKIITSCVSVDFQGND 236 (484)
Q Consensus 158 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~~ 236 (484)
-++|++...++.|+.+.||++... +..+++|+...........+.+|+++++.+. +..+.++++++. ...
T Consensus 13 l~~~~~~~~~~g~s~~~v~~~~~~----~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~-----~~~ 83 (263)
T 3tm0_A 13 IEKYRCVKDTEGMSPAKVYKLVGE----NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFER-----HDG 83 (263)
T ss_dssp HTTSEEEECCSCCSSSEEEEEECS----SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEE-----ETT
T ss_pred hccceeEeeccCCCCCeEEEEECC----CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEe-----cCC
Confidence 356888888999999999998732 4679999987532233356889999999884 666778887753 234
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-----------------------------
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYC----------------------------- 287 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~----------------------------- 287 (484)
..++||||++|.+|.+.+. +......++.+++++|+.||...
T Consensus 84 ~~~lv~e~i~G~~l~~~~~---------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (263)
T 3tm0_A 84 WSNLLMSEADGVLCSEEYE---------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVD 154 (263)
T ss_dssp EEEEEEECCSSEEHHHHCC---------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCS
T ss_pred ceEEEEEecCCeehhhccC---------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccc
Confidence 7799999999999987632 11123467889999999999611
Q ss_pred ---------------------------CCCeeecCCCCCCeeecCCCceEEcccCcccc
Q 011508 288 ---------------------------ETPIVHCDLKPSNVLLDGELTAHVSDFGLAKF 319 (484)
Q Consensus 288 ---------------------------~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~ 319 (484)
...++|+|++|.||+++++..+.|+||+.+..
T Consensus 155 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 155 CENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp GGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred cccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 14589999999999998766677999997754
No 258
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.25 E-value=4.4e-12 Score=135.57 Aligned_cols=83 Identities=34% Similarity=0.540 Sum_probs=73.2
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccc-cccccCcccccCCCcccc
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIK-GVFSNSSAISLDGNVNLC 79 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n~~l~ 79 (484)
|++|+|+|.+|.++++|++|+.|||++|+|+|.||.+++++++|+.||||+|+|+|.+|.. ..+++++.+++++| .+.
T Consensus 639 Ls~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N-~l~ 717 (768)
T 3rgz_A 639 MSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNN-NLS 717 (768)
T ss_dssp CCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSS-EEE
T ss_pred CcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCC-ccc
Confidence 6789999999999999999999999999999999999999999999999999999988865 67888999999998 788
Q ss_pred CCCcc
Q 011508 80 GGISE 84 (484)
Q Consensus 80 g~~~~ 84 (484)
|.+|.
T Consensus 718 g~iP~ 722 (768)
T 3rgz_A 718 GPIPE 722 (768)
T ss_dssp EECCS
T ss_pred ccCCC
Confidence 87664
No 259
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.21 E-value=1.2e-11 Score=117.57 Aligned_cols=83 Identities=28% Similarity=0.490 Sum_probs=72.9
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccccccccCcccccCCCccccC
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIKGVFSNSSAISLDGNVNLCG 80 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~l~g 80 (484)
|++|++++.+|. ++.+++|+.|+|++|+|+|.+|..+.++++|+.|+|++|+|+|.+|....++++..+++++|+.+||
T Consensus 228 L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~ 306 (313)
T 1ogq_A 228 LAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCG 306 (313)
T ss_dssp CCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEES
T ss_pred CCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCCccccccChHHhcCCCCccC
Confidence 567788766665 7888999999999999999999999999999999999999999999888899999999999999999
Q ss_pred CCcc
Q 011508 81 GISE 84 (484)
Q Consensus 81 ~~~~ 84 (484)
.+.+
T Consensus 307 ~p~~ 310 (313)
T 1ogq_A 307 SPLP 310 (313)
T ss_dssp TTSS
T ss_pred CCCC
Confidence 7543
No 260
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.17 E-value=3.5e-11 Score=103.26 Aligned_cols=80 Identities=20% Similarity=0.182 Sum_probs=62.4
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceeccccc-ccccccCcccccCCCcccc
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPI-KGVFSNSSAISLDGNVNLC 79 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~-~~~~~~~~~~~~~~n~~l~ 79 (484)
|++|+|++..|..|+.+++|+.|+|++|+|++..|..+.++++|+.|+|++|+|++.++. ...+.+++.+++++|+.-|
T Consensus 37 L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 37 LYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp CCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred cCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 578888877777888888888888888888854444567888888888888888887775 4667888888888886555
Q ss_pred C
Q 011508 80 G 80 (484)
Q Consensus 80 g 80 (484)
.
T Consensus 117 ~ 117 (170)
T 3g39_A 117 A 117 (170)
T ss_dssp T
T ss_pred C
Confidence 4
No 261
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.17 E-value=4.1e-11 Score=103.19 Aligned_cols=79 Identities=20% Similarity=0.224 Sum_probs=53.7
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceeccccc-ccccccCcccccCCCcccc
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPI-KGVFSNSSAISLDGNVNLC 79 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~-~~~~~~~~~~~~~~n~~l~ 79 (484)
|++|+|++..|..|+++++|+.|+|++|+|++..|..+.++++|+.|+|++|+|++.++. ...+++++.+++++|+.-|
T Consensus 40 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 40 LNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred eCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEEeCCCCccc
Confidence 567777766667777777777777777777743333356777777777777777766664 3556777777777775444
No 262
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.15 E-value=6.5e-11 Score=109.17 Aligned_cols=138 Identities=14% Similarity=0.081 Sum_probs=95.4
Q ss_pred CCCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCC--ceeEeeeeeeeccCCCc
Q 011508 159 DGFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRN--LVKIITSCVSVDFQGND 236 (484)
Q Consensus 159 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~~~~~~~~~~~~~~ 236 (484)
.++.+....+.|..+.||++... ++..+++|+.... ....+.+|+.+++.+.+.+ +.+++++.. .++
T Consensus 20 ~~~~~~~~~~gg~~~~v~~~~~~---~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~-----~~~ 88 (264)
T 1nd4_A 20 FGYDWAQQTIGCSDAAVFRLSAQ---GRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVT-----EAG 88 (264)
T ss_dssp TTCEEEECSCTTSSCEEEEEECT---TSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEE-----CSS
T ss_pred CCCceEecccCCCCceEEEEecC---CCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEecc-----CCC
Confidence 34454444446667999998643 3567999987543 2345778999999885545 445776532 234
Q ss_pred eeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-----------------------------
Q 011508 237 FEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYC----------------------------- 287 (484)
Q Consensus 237 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~----------------------------- 287 (484)
..++||||++|.+|. .. . .+ ...++.++++.|+.||...
T Consensus 89 ~~~~v~e~i~G~~l~--~~---~----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (264)
T 1nd4_A 89 RDWLLLGEVPGQDLL--SS---H----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQD 156 (264)
T ss_dssp CEEEEEECCSSEETT--TS---C----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTT
T ss_pred CCEEEEEecCCcccC--cC---c----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccch
Confidence 679999999998884 21 0 11 2256778888888888531
Q ss_pred --------------------------CCCeeecCCCCCCeeecCCCceEEcccCcccc
Q 011508 288 --------------------------ETPIVHCDLKPSNVLLDGELTAHVSDFGLAKF 319 (484)
Q Consensus 288 --------------------------~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~ 319 (484)
...++|+|++|.||+++++..+.|+||+.+..
T Consensus 157 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 157 DLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp SCCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hhhhhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 11299999999999998876677999998764
No 263
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.15 E-value=5.1e-11 Score=104.45 Aligned_cols=80 Identities=20% Similarity=0.203 Sum_probs=59.0
Q ss_pred CCCCcccccCch-hhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceeccccc-ccccccCcccccCCCccc
Q 011508 1 MNGNFFQGNIPS-SLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPI-KGVFSNSSAISLDGNVNL 78 (484)
Q Consensus 1 l~~n~l~g~~p~-~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~-~~~~~~~~~~~~~~n~~l 78 (484)
|++|+|++..|. .++++++|+.|+|++|+|++..|..+.++++|+.|+|++|+|++.+|. ...+++++.+++++| .+
T Consensus 36 l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N-~l 114 (192)
T 1w8a_A 36 LNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDN-QI 114 (192)
T ss_dssp CCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSS-CC
T ss_pred CCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCC-cC
Confidence 567788744443 377888888888888888877777788888888888888888877775 356777888888887 45
Q ss_pred cCC
Q 011508 79 CGG 81 (484)
Q Consensus 79 ~g~ 81 (484)
.+.
T Consensus 115 ~~~ 117 (192)
T 1w8a_A 115 SCV 117 (192)
T ss_dssp CEE
T ss_pred Cee
Confidence 543
No 264
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.13 E-value=1.2e-12 Score=132.23 Aligned_cols=80 Identities=20% Similarity=0.130 Sum_probs=58.9
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCcccc-CCCCCCeeeccccceecccccccccccCcccccCCCcccc
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLE-NFPFLQNLNLSFNHFEGEVPIKGVFSNSSAISLDGNVNLC 79 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~-~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~l~ 79 (484)
|++|+|++..|..++++++|+.|+|++|+|+|.+|..+. ++++|+.|+|++|.|++.++ ...++++..+++++| .+.
T Consensus 127 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~-~~~l~~L~~L~Ls~N-~l~ 204 (487)
T 3oja_A 127 LANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKG-QVVFAKLKTLDLSSN-KLA 204 (487)
T ss_dssp CCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEEC-CCCCTTCCEEECCSS-CCC
T ss_pred CCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccccc-cccCCCCCEEECCCC-CCC
Confidence 567778877777788888888888888888877777775 67788888888888877644 335777777788777 555
Q ss_pred CCC
Q 011508 80 GGI 82 (484)
Q Consensus 80 g~~ 82 (484)
+.+
T Consensus 205 ~~~ 207 (487)
T 3oja_A 205 FMG 207 (487)
T ss_dssp EEC
T ss_pred CCC
Confidence 533
No 265
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.06 E-value=2.1e-10 Score=100.52 Aligned_cols=78 Identities=28% Similarity=0.401 Sum_probs=64.0
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceeccccc-ccccccCcccccCCCcccc
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPI-KGVFSNSSAISLDGNVNLC 79 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~-~~~~~~~~~~~~~~n~~l~ 79 (484)
|++|+|+ .+|..++++++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++.+|. ...+++++.+++++| .+.
T Consensus 38 L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N-~l~ 115 (193)
T 2wfh_A 38 LDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGN-DIS 115 (193)
T ss_dssp CCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSS-CCC
T ss_pred CCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECCCC-CCC
Confidence 5788888 8888888999999999999999866667788889999999999999887774 366788888888888 444
Q ss_pred C
Q 011508 80 G 80 (484)
Q Consensus 80 g 80 (484)
+
T Consensus 116 ~ 116 (193)
T 2wfh_A 116 V 116 (193)
T ss_dssp B
T ss_pred e
Confidence 3
No 266
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.04 E-value=2.8e-10 Score=102.01 Aligned_cols=80 Identities=18% Similarity=0.136 Sum_probs=59.6
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccc-cccccCcccccCCCcccc
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIK-GVFSNSSAISLDGNVNLC 79 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n~~l~ 79 (484)
|++|+|++..|..|+.+++|+.|+|++|+|++..|..+.++++|+.|+|++|+|++.+|.. ..+.+++.+++++| .+.
T Consensus 64 L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N-~l~ 142 (220)
T 2v70_A 64 FSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDN-QIT 142 (220)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTS-CCC
T ss_pred CCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCC-cCC
Confidence 5678888666667888888888888888888666666778888888888888888776643 56677888888887 455
Q ss_pred CC
Q 011508 80 GG 81 (484)
Q Consensus 80 g~ 81 (484)
+.
T Consensus 143 ~~ 144 (220)
T 2v70_A 143 TV 144 (220)
T ss_dssp CB
T ss_pred EE
Confidence 43
No 267
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.01 E-value=3.2e-10 Score=109.26 Aligned_cols=73 Identities=16% Similarity=0.138 Sum_probs=43.2
Q ss_pred cccccCchhhhCCCCCCEEeCcC-CccccccCccccCCCCCCeeeccccceecccccc-cccccCcccccCCCccccC
Q 011508 5 FFQGNIPSSLSSLRGIENLDLSQ-NNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIK-GVFSNSSAISLDGNVNLCG 80 (484)
Q Consensus 5 ~l~g~~p~~~~~l~~l~~l~ls~-N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n~~l~g 80 (484)
+|+ .||. |+.+++|+.|+|++ |+|++..|..|.+|++|+.|+|++|+|++.+|.. ..+++|+.|++++| .|.+
T Consensus 20 ~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N-~l~~ 94 (347)
T 2ifg_A 20 ALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN-ALES 94 (347)
T ss_dssp CCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS-CCSC
T ss_pred CCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC-ccce
Confidence 565 4666 66666666666664 6666444455666666666666666666655543 45566666666666 4443
No 268
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.99 E-value=1.2e-09 Score=105.83 Aligned_cols=146 Identities=13% Similarity=0.145 Sum_probs=103.6
Q ss_pred ccCccccccceeEEEEEEcCCCCeeEEEEEEee--ccCc-cchHHHHHHHHHHHcCC--CCCceeEeeeeeeeccCCCce
Q 011508 163 LENLIGAGSFGSVYKGIFDHDDHETLVAVKVLN--LQHR-GASKSFIAECQALRSIR--HRNLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 163 ~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~--~~~~-~~~~~~~~e~~~l~~l~--h~niv~~~~~~~~~~~~~~~~ 237 (484)
..+.|+.|.++.||+.... +..+++|+.. .... .....+.+|..+++.+. +..+.+++.++.... ..+.
T Consensus 42 ~~~~l~~G~sn~~y~v~~~----~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~--~~g~ 115 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTP----GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDES--VIGR 115 (359)
T ss_dssp EEEECCC-CCSCEEEEECS----SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTT--TTSS
T ss_pred eEEEcCCcccceEEEEEEC----CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCC--ccCC
Confidence 3567899999999998743 2467788765 3221 12346788999999986 345777887754321 1135
Q ss_pred eeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC------------------------------
Q 011508 238 EALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYC------------------------------ 287 (484)
Q Consensus 238 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~------------------------------ 287 (484)
.++||||++|..+.+. ....++..++..++.++++.|+.||...
T Consensus 116 ~~~vme~v~G~~l~~~------~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (359)
T 3dxp_A 116 AFYIMEFVSGRVLWDQ------SLPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLS 189 (359)
T ss_dssp CEEEEECCCCBCCCCT------TCTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEecCCeecCCC------ccccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhc
Confidence 7899999998777431 1223678888899999999999999631
Q ss_pred -------------------------CCCeeecCCCCCCeeecCCCc--eEEcccCccccc
Q 011508 288 -------------------------ETPIVHCDLKPSNVLLDGELT--AHVSDFGLAKFL 320 (484)
Q Consensus 288 -------------------------~~~ivH~dlk~~NIll~~~~~--~kl~Dfg~a~~~ 320 (484)
...++|||+++.||+++.++. +.|+||+.+...
T Consensus 190 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g 249 (359)
T 3dxp_A 190 ETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG 249 (359)
T ss_dssp CCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred CCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence 256999999999999987753 689999988754
No 269
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=98.97 E-value=9.8e-10 Score=96.26 Aligned_cols=70 Identities=21% Similarity=0.299 Sum_probs=34.8
Q ss_pred CCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceeccccc-ccccccCcccccCCC
Q 011508 2 NGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPI-KGVFSNSSAISLDGN 75 (484)
Q Consensus 2 ~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~-~~~~~~~~~~~~~~n 75 (484)
++|+|+ .+|..+. ++|+.|+|++|+|+ .+|..+.++++|+.|+|++|+|++..|. ...+.+|+.+++++|
T Consensus 18 ~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 18 SNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 344454 4554332 34555555555555 4555555555555555555555544443 234445555555555
No 270
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=98.97 E-value=6.8e-10 Score=97.22 Aligned_cols=79 Identities=22% Similarity=0.304 Sum_probs=53.6
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccc-cccccCcccccCCCcccc
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIK-GVFSNSSAISLDGNVNLC 79 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n~~l~ 79 (484)
|++|+|++.+|..|+++++|+.|+|++|+|++..|..+.++++|+.|+|++|+|++.+|.. ..+++++.+++++|+.-|
T Consensus 61 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 140 (192)
T 1w8a_A 61 LKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNC 140 (192)
T ss_dssp CCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCC
T ss_pred CCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccC
Confidence 4667777666777777777777777777777666666677777777777777777766543 456667777777775433
No 271
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=98.93 E-value=1.6e-09 Score=93.56 Aligned_cols=80 Identities=20% Similarity=0.188 Sum_probs=65.7
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccc-cccccCcccccCCCcccc
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIK-GVFSNSSAISLDGNVNLC 79 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n~~l~ 79 (484)
|++|+|++..|..++.+++|+.|+|++|+|++..|..+.++++|+.|+|++|+|++.++.. ..+++++.+++++| .+.
T Consensus 35 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N-~l~ 113 (177)
T 2o6r_A 35 LESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTN-QLK 113 (177)
T ss_dssp CCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS-CCS
T ss_pred eCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCC-cce
Confidence 5789998655566799999999999999999555555789999999999999999887764 67889999999999 565
Q ss_pred CC
Q 011508 80 GG 81 (484)
Q Consensus 80 g~ 81 (484)
+-
T Consensus 114 ~~ 115 (177)
T 2o6r_A 114 SV 115 (177)
T ss_dssp CC
T ss_pred Ee
Confidence 43
No 272
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=98.92 E-value=1.4e-09 Score=97.50 Aligned_cols=79 Identities=25% Similarity=0.251 Sum_probs=64.4
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCcc-ccCCCCCCeeeccccceecccccc-cccccCcccccCCCccc
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKY-LENFPFLQNLNLSFNHFEGEVPIK-GVFSNSSAISLDGNVNL 78 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~-~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n~~l 78 (484)
|++|+|++..|..|+.+++|+.|+|++|+|+ .+|.. +..+++|+.|+|++|+|++..|.. ..+++++.+++++| .+
T Consensus 63 Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N-~l 140 (220)
T 2v9t_B 63 LSNNQISELAPDAFQGLRSLNSLVLYGNKIT-ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDN-KL 140 (220)
T ss_dssp CCSSCCCEECTTTTTTCSSCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS-CC
T ss_pred CCCCcCCCcCHHHhhCCcCCCEEECCCCcCC-ccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCC-cC
Confidence 6789999777888999999999999999999 55554 678999999999999998887753 56788888889888 45
Q ss_pred cCC
Q 011508 79 CGG 81 (484)
Q Consensus 79 ~g~ 81 (484)
.+.
T Consensus 141 ~~~ 143 (220)
T 2v9t_B 141 QTI 143 (220)
T ss_dssp SCC
T ss_pred CEE
Confidence 543
No 273
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=98.92 E-value=1.1e-09 Score=103.87 Aligned_cols=82 Identities=26% Similarity=0.397 Sum_probs=70.0
Q ss_pred CCCCcccc--cCchhhhCCCCCCEEeCcC-CccccccCccccCCCCCCeeeccccceeccccc-ccccccCcccccCCCc
Q 011508 1 MNGNFFQG--NIPSSLSSLRGIENLDLSQ-NNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPI-KGVFSNSSAISLDGNV 76 (484)
Q Consensus 1 l~~n~l~g--~~p~~~~~l~~l~~l~ls~-N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~-~~~~~~~~~~~~~~n~ 76 (484)
|++|+++| .+|..++++++|++|+|++ |+++|.+|..++++++|+.|+|++|+++|.+|. ...+++++.+++++|
T Consensus 57 L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N- 135 (313)
T 1ogq_A 57 LSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYN- 135 (313)
T ss_dssp EECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSS-
T ss_pred CCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCC-
Confidence 46788998 8999999999999999995 999999999999999999999999999988876 467888999999998
Q ss_pred cccCCCc
Q 011508 77 NLCGGIS 83 (484)
Q Consensus 77 ~l~g~~~ 83 (484)
.+.+..+
T Consensus 136 ~l~~~~p 142 (313)
T 1ogq_A 136 ALSGTLP 142 (313)
T ss_dssp EEESCCC
T ss_pred ccCCcCC
Confidence 5665443
No 274
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=98.91 E-value=1.7e-09 Score=96.87 Aligned_cols=81 Identities=15% Similarity=0.117 Sum_probs=69.5
Q ss_pred CCCCcccccCch-hhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceeccccc-ccccccCcccccCCCccc
Q 011508 1 MNGNFFQGNIPS-SLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPI-KGVFSNSSAISLDGNVNL 78 (484)
Q Consensus 1 l~~n~l~g~~p~-~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~-~~~~~~~~~~~~~~n~~l 78 (484)
|++|+|++..|. .|+.+++|+.|+|++|+|++..|..+.++++|+.|+|++|+|++.+|. ...+++++.+++++| .+
T Consensus 39 L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N-~l 117 (220)
T 2v70_A 39 LNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSN-RI 117 (220)
T ss_dssp CCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTS-CC
T ss_pred cCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCC-cC
Confidence 689999976564 589999999999999999977777899999999999999999998886 467889999999999 56
Q ss_pred cCCC
Q 011508 79 CGGI 82 (484)
Q Consensus 79 ~g~~ 82 (484)
.+..
T Consensus 118 ~~~~ 121 (220)
T 2v70_A 118 TCVG 121 (220)
T ss_dssp CCBC
T ss_pred CeEC
Confidence 5543
No 275
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=98.91 E-value=1.6e-09 Score=97.68 Aligned_cols=79 Identities=19% Similarity=0.197 Sum_probs=58.0
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccccccccCcccccCCCccccC
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIKGVFSNSSAISLDGNVNLCG 80 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~l~g 80 (484)
|++|+|++..|..++.+++|+.|+|++|+|++..|..+..+++|+.|+|++|+|+..++....+.+++.+++++| .+.+
T Consensus 71 L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~L~~N-~l~~ 149 (229)
T 3e6j_A 71 LGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLTELPRGIERLTHLTHLALDQN-QLKS 149 (229)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCSCCTTGGGCTTCSEEECCSS-CCCC
T ss_pred CCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCcccccCcccccCCCCCEEECCCC-cCCc
Confidence 577888733334568888888888888888855455567888888888888888855555567778888888888 4544
No 276
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=98.90 E-value=1.8e-09 Score=92.83 Aligned_cols=77 Identities=16% Similarity=0.207 Sum_probs=68.1
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccc-cccccCcccccCCCcccc
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIK-GVFSNSSAISLDGNVNLC 79 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n~~l~ 79 (484)
+++|+|+ .+|..+. ++|+.|+|++|+|++..|..+.++++|+.|+|++|+|++.++.. ..+.+|+.+++++| .+.
T Consensus 19 ~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N-~l~ 94 (174)
T 2r9u_A 19 CQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN-HLK 94 (174)
T ss_dssp CCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS-CCC
T ss_pred eCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC-ccc
Confidence 5789996 9999875 89999999999999888889999999999999999999987764 67899999999999 555
Q ss_pred CC
Q 011508 80 GG 81 (484)
Q Consensus 80 g~ 81 (484)
+-
T Consensus 95 ~l 96 (174)
T 2r9u_A 95 SI 96 (174)
T ss_dssp CC
T ss_pred ee
Confidence 43
No 277
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=98.90 E-value=1.5e-09 Score=113.25 Aligned_cols=80 Identities=23% Similarity=0.253 Sum_probs=57.8
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccc-ccc-ccCcccccCCCccc
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIK-GVF-SNSSAISLDGNVNL 78 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~-~~~~~~~~~~n~~l 78 (484)
|++|+|++.+|..|++|++|+.|+|++|+|++..|..+.++++|+.|||++|+|++.+|.. ..+ ++++.+++++||..
T Consensus 501 Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~ 580 (635)
T 4g8a_A 501 LSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFA 580 (635)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBC
T ss_pred CCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCc
Confidence 5677777777777777777777777777777666666777777777777777777777654 333 56777777777766
Q ss_pred cC
Q 011508 79 CG 80 (484)
Q Consensus 79 ~g 80 (484)
|.
T Consensus 581 C~ 582 (635)
T 4g8a_A 581 CT 582 (635)
T ss_dssp CS
T ss_pred cc
Confidence 54
No 278
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.89 E-value=1.7e-09 Score=110.80 Aligned_cols=98 Identities=23% Similarity=0.223 Sum_probs=72.8
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccccccccCcccccCCCccccC
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIKGVFSNSSAISLDGNVNLCG 80 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~l~g 80 (484)
|++|+|+ .+|. +++|++|+.|+|++|+|+ .+|..+++|++|+.|+|++|+|++ +|..+.+++|+.|++++| .+.+
T Consensus 448 Ls~n~l~-~lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp~l~~l~~L~~L~Ls~N-~l~~ 522 (567)
T 1dce_A 448 LAHKDLT-VLCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VDGVANLPRLQELLLCNN-RLQQ 522 (567)
T ss_dssp CTTSCCS-SCCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CGGGTTCSSCCEEECCSS-CCCS
T ss_pred ecCCCCC-CCcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-CcccCCCCCCcEEECCCC-CCCC
Confidence 5788888 4786 889999999999999998 888889999999999999999987 456677888888999888 6666
Q ss_pred CC-ccccccccccccccccccccce
Q 011508 81 GI-SELHLCTCSTKESKQSRSRSLK 104 (484)
Q Consensus 81 ~~-~~~~~~~c~~~~~~~~~~~~~~ 104 (484)
.. +. ....++.......+.+.+.
T Consensus 523 ~~~p~-~l~~l~~L~~L~L~~N~l~ 546 (567)
T 1dce_A 523 SAAIQ-PLVSCPRLVLLNLQGNSLC 546 (567)
T ss_dssp SSTTG-GGGGCTTCCEEECTTSGGG
T ss_pred CCCcH-HHhcCCCCCEEEecCCcCC
Confidence 53 22 2233444444444444433
No 279
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.88 E-value=1e-09 Score=103.54 Aligned_cols=195 Identities=16% Similarity=0.134 Sum_probs=120.2
Q ss_pred cCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCC-CCC--ceeEeeeeeeeccCCCceeeE
Q 011508 164 ENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIR-HRN--LVKIITSCVSVDFQGNDFEAL 240 (484)
Q Consensus 164 ~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~n--iv~~~~~~~~~~~~~~~~~~l 240 (484)
.+.++.|.+..||+.. ..+++|+.... .....+.+|.++++.+. +.. +.+++..... ...-...++
T Consensus 25 i~~~~~G~~n~v~~v~-------~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~--~~~~~~~~~ 93 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN-------RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMP--SETYQMSFA 93 (304)
T ss_dssp CCEEEECSSEEEEEST-------TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCC--CSSCSCSCE
T ss_pred eEecCCCCcceEEEEC-------CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCC--CCCCCcceE
Confidence 4568999999999863 34888875422 23467889999998883 333 3334433211 011124578
Q ss_pred EeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC---------------------------------
Q 011508 241 VYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYC--------------------------------- 287 (484)
Q Consensus 241 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~--------------------------------- 287 (484)
|||+++|.++.+... ..++..++..++.++++.++.||...
T Consensus 94 vm~~i~G~~l~~~~~------~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (304)
T 3sg8_A 94 GFTKIKGVPLTPLLL------NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKG 167 (304)
T ss_dssp EEECCCCEECCHHHH------HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCH
T ss_pred EEcccCCeECCcccc------ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCc
Confidence 999999988865332 13677778888888888888888511
Q ss_pred ----------------------CCCeeecCCCCCCeeecC--CCceEEcccCcccccccccccCCCCcc-------cccc
Q 011508 288 ----------------------ETPIVHCDLKPSNVLLDG--ELTAHVSDFGLAKFLPEAANNLSSNQS-------SSVG 336 (484)
Q Consensus 288 ----------------------~~~ivH~dlk~~NIll~~--~~~~kl~Dfg~a~~~~~~~~~~~~~~~-------~~~~ 336 (484)
...++|+|++|.||++++ +..+.|+||+.+...+........... ....
T Consensus 168 ~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 247 (304)
T 3sg8_A 168 PQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSK 247 (304)
T ss_dssp HHHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHH
T ss_pred ccHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHH
Confidence 135799999999999998 556889999998765332110000000 0000
Q ss_pred ccccccccC-ccccCCCCCCcccceehhhHHHHHHHhCCCCC
Q 011508 337 VKGTVGYAA-PEYGMGSEVSTSGDVYSFGILLLEMFTGKGPT 377 (484)
Q Consensus 337 ~~g~~~y~a-PE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~ 377 (484)
....++... |+... ......+.|++|.++|.+.+|..+|
T Consensus 248 ~l~~Y~~~~~~~~~~--r~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 248 ILNHYKHKDIPTVLE--KYRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp HHHHHTCSCHHHHHH--HHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHcCCCCcHHHHH--HHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 001111111 22111 0112258899999999999999775
No 280
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=98.87 E-value=2.7e-09 Score=91.39 Aligned_cols=78 Identities=18% Similarity=0.235 Sum_probs=68.6
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccc-cccccCcccccCCCcccc
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIK-GVFSNSSAISLDGNVNLC 79 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n~~l~ 79 (484)
+++|+|+ .+|..+. ++|+.|+|++|+|++..|..+.++++|+.|+|++|+|++.+|.. ..+++++.+++++| .+.
T Consensus 16 ~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N-~l~ 91 (170)
T 3g39_A 16 CSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN-QLK 91 (170)
T ss_dssp CTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS-CCC
T ss_pred eCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC-ccC
Confidence 5789998 7998774 89999999999999877889999999999999999999888865 67899999999999 565
Q ss_pred CCC
Q 011508 80 GGI 82 (484)
Q Consensus 80 g~~ 82 (484)
+-+
T Consensus 92 ~~~ 94 (170)
T 3g39_A 92 SIP 94 (170)
T ss_dssp CCC
T ss_pred EeC
Confidence 543
No 281
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.86 E-value=2.5e-09 Score=109.54 Aligned_cols=79 Identities=28% Similarity=0.402 Sum_probs=71.1
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceeccc--ccccccccCcccccCCCccc
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEV--PIKGVFSNSSAISLDGNVNL 78 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~--p~~~~~~~~~~~~~~~n~~l 78 (484)
|++|+|+ .+|..+++|++|+.|+|++|+|++ +| .+++|++|+.|+|++|+|++.+ +....+++|+.+++++| .+
T Consensus 470 Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N-~l 545 (567)
T 1dce_A 470 LSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGN-SL 545 (567)
T ss_dssp CCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTS-GG
T ss_pred cCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCC-cC
Confidence 6899999 999999999999999999999995 88 8999999999999999999984 45588999999999999 56
Q ss_pred cCCCc
Q 011508 79 CGGIS 83 (484)
Q Consensus 79 ~g~~~ 83 (484)
++.++
T Consensus 546 ~~~~~ 550 (567)
T 1dce_A 546 CQEEG 550 (567)
T ss_dssp GGSSS
T ss_pred CCCcc
Confidence 66543
No 282
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=98.85 E-value=1.8e-09 Score=90.19 Aligned_cols=77 Identities=19% Similarity=0.270 Sum_probs=67.8
Q ss_pred CCCCccc-ccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccc-cccccCcccccCCCccc
Q 011508 1 MNGNFFQ-GNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIK-GVFSNSSAISLDGNVNL 78 (484)
Q Consensus 1 l~~n~l~-g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n~~l 78 (484)
|++|+++ |.+|..++.+++|+.|+|++|++++. ..++++++|+.|+|++|++++.+|.. ..+++++.+++++| .+
T Consensus 24 l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls~N-~i 100 (149)
T 2je0_A 24 LDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGN-KI 100 (149)
T ss_dssp CTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEECTTS-CC
T ss_pred ccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEECCCC-cC
Confidence 5789998 89999999999999999999999954 77999999999999999999977765 45899999999999 45
Q ss_pred cC
Q 011508 79 CG 80 (484)
Q Consensus 79 ~g 80 (484)
.+
T Consensus 101 ~~ 102 (149)
T 2je0_A 101 KD 102 (149)
T ss_dssp CS
T ss_pred CC
Confidence 54
No 283
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=98.85 E-value=3.9e-09 Score=94.51 Aligned_cols=81 Identities=19% Similarity=0.175 Sum_probs=71.0
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccc-cccccCcccccCCCcccc
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIK-GVFSNSSAISLDGNVNLC 79 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n~~l~ 79 (484)
|++|+|++..|..|..+++|+.|+|++|+|++..|..+.++++|+.|+|++|+|++.++.. ..+.+++.+++++| .+.
T Consensus 39 l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N-~l~ 117 (220)
T 2v9t_B 39 LEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNAN-KIN 117 (220)
T ss_dssp CCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS-CCC
T ss_pred CCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCC-CCC
Confidence 6899999666668999999999999999999888999999999999999999999777654 67899999999999 555
Q ss_pred CCC
Q 011508 80 GGI 82 (484)
Q Consensus 80 g~~ 82 (484)
+..
T Consensus 118 ~~~ 120 (220)
T 2v9t_B 118 CLR 120 (220)
T ss_dssp CCC
T ss_pred EeC
Confidence 443
No 284
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=98.85 E-value=3.3e-09 Score=102.16 Aligned_cols=80 Identities=25% Similarity=0.242 Sum_probs=70.3
Q ss_pred CCC-CcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccccccccCcccccCCCcccc
Q 011508 1 MNG-NFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIKGVFSNSSAISLDGNVNLC 79 (484)
Q Consensus 1 l~~-n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~l~ 79 (484)
|++ |+|++..|..|++|++|+.|+|++|+|+|..|..|.+|++|+.|+|++|+|++.++.......|+.+++.+|+.-|
T Consensus 38 l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~L~~l~l~~N~~~c 117 (347)
T 2ifg_A 38 IENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLSLQELVLSGNPLHC 117 (347)
T ss_dssp CCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCSCCCCEEECCSSCCCC
T ss_pred ccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccceeCHHHcccCCceEEEeeCCCccC
Confidence 575 9999777789999999999999999999988889999999999999999999888765444449999999997666
Q ss_pred C
Q 011508 80 G 80 (484)
Q Consensus 80 g 80 (484)
.
T Consensus 118 ~ 118 (347)
T 2ifg_A 118 S 118 (347)
T ss_dssp C
T ss_pred C
Confidence 4
No 285
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=98.84 E-value=5.4e-09 Score=90.12 Aligned_cols=77 Identities=18% Similarity=0.228 Sum_probs=56.6
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccc-cccccCcccccCCCcccc
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIK-GVFSNSSAISLDGNVNLC 79 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n~~l~ 79 (484)
+++|+++ .+|..+. ++|+.|+|++|++++..|..+.++++|+.|+|++|+|++.++.. ..+.+++.+++++| .+.
T Consensus 14 ~~~~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N-~l~ 89 (177)
T 2o6r_A 14 CNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN-KLQ 89 (177)
T ss_dssp CCSSCCS-SCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS-CCC
T ss_pred ecCCCCc-cCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC-Ccc
Confidence 3567777 6775543 68888888888888555555678888888888888888776654 56778888888888 555
Q ss_pred CC
Q 011508 80 GG 81 (484)
Q Consensus 80 g~ 81 (484)
+.
T Consensus 90 ~~ 91 (177)
T 2o6r_A 90 SL 91 (177)
T ss_dssp CC
T ss_pred cc
Confidence 43
No 286
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=98.82 E-value=2.9e-09 Score=111.12 Aligned_cols=81 Identities=15% Similarity=0.210 Sum_probs=64.7
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCC----------------------------------------------------
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQN---------------------------------------------------- 28 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N---------------------------------------------------- 28 (484)
|++|+++|.+|+++++|++|+.|||++|
T Consensus 88 L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~ 167 (636)
T 4eco_A 88 LEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCIN 167 (636)
T ss_dssp CTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHH
T ss_pred ecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhh
Confidence 5788888888888899999999998887
Q ss_pred --------------------------ccccccCccccCCCCCCeeeccccceecc-----------------cc-ccc--
Q 011508 29 --------------------------NLSGRIPKYLENFPFLQNLNLSFNHFEGE-----------------VP-IKG-- 62 (484)
Q Consensus 29 --------------------------~l~g~~p~~~~~l~~L~~l~ls~N~l~g~-----------------~p-~~~-- 62 (484)
+|+| ||.+++++++|+.|+|++|+|+|. +| ..+
T Consensus 168 ~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~ 246 (636)
T 4eco_A 168 SDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWD 246 (636)
T ss_dssp HCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGG
T ss_pred cCccccccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhc
Confidence 4556 888888888899999998888883 44 446
Q ss_pred ccccCcccccCCCccccCCCc
Q 011508 63 VFSNSSAISLDGNVNLCGGIS 83 (484)
Q Consensus 63 ~~~~~~~~~~~~n~~l~g~~~ 83 (484)
.+++++.+++++| .+.|..|
T Consensus 247 ~l~~L~~L~L~~n-~l~~~~p 266 (636)
T 4eco_A 247 NLKDLTDVEVYNC-PNLTKLP 266 (636)
T ss_dssp GCTTCCEEEEECC-TTCSSCC
T ss_pred ccCCCCEEEecCC-cCCccCh
Confidence 7888888888888 5566544
No 287
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=98.82 E-value=8.2e-09 Score=93.04 Aligned_cols=77 Identities=19% Similarity=0.247 Sum_probs=59.2
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccC-ccccCCCCCCeeeccccceecccccc-cccccCcccccCCCccc
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIP-KYLENFPFLQNLNLSFNHFEGEVPIK-GVFSNSSAISLDGNVNL 78 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p-~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n~~l 78 (484)
|++|+|++..|..++.+++|+.|+|++|+|+ .+| ..+..+++|+.|+|++|+|++.++.. ..+.+++.+++++| .+
T Consensus 47 Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~-~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N-~l 124 (229)
T 3e6j_A 47 LHDNQITKLEPGVFDSLINLKELYLGSNQLG-ALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCN-KL 124 (229)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS-CC
T ss_pred cCCCccCccCHHHhhCccCCcEEECCCCCCC-CcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCC-cc
Confidence 5778888777788888888888888888887 444 44678888888888888888776654 56778888888888 44
Q ss_pred c
Q 011508 79 C 79 (484)
Q Consensus 79 ~ 79 (484)
.
T Consensus 125 ~ 125 (229)
T 3e6j_A 125 T 125 (229)
T ss_dssp C
T ss_pred c
Confidence 4
No 288
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=98.82 E-value=2.7e-09 Score=114.11 Aligned_cols=82 Identities=13% Similarity=0.178 Sum_probs=63.3
Q ss_pred CCCCcccccCchhhhCCCCCCEEeC-cCCccccc----------------------------------------------
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDL-SQNNLSGR---------------------------------------------- 33 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~l-s~N~l~g~---------------------------------------------- 33 (484)
|++|+|+|.+|++|++|++|+.||| ++|.++|.
T Consensus 330 Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~ 409 (876)
T 4ecn_A 330 LAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAIN 409 (876)
T ss_dssp CTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHH
T ss_pred CccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhh
Confidence 5788888888888888888888888 77766665
Q ss_pred ------------------------------cCccccCCCCCCeeeccccceec-----------------ccc-ccc--c
Q 011508 34 ------------------------------IPKYLENFPFLQNLNLSFNHFEG-----------------EVP-IKG--V 63 (484)
Q Consensus 34 ------------------------------~p~~~~~l~~L~~l~ls~N~l~g-----------------~~p-~~~--~ 63 (484)
||..+++|++|+.|+|++|+|+| .+| ..+ .
T Consensus 410 ~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~ 489 (876)
T 4ecn_A 410 RNPEMKPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSN 489 (876)
T ss_dssp TCTTSCCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGG
T ss_pred hCccccccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhcc
Confidence 78888888888888888888888 244 335 6
Q ss_pred cccCcccccCCCccccCCCc
Q 011508 64 FSNSSAISLDGNVNLCGGIS 83 (484)
Q Consensus 64 ~~~~~~~~~~~n~~l~g~~~ 83 (484)
+++|+.+++++| .+.|..|
T Consensus 490 L~~L~~L~Ls~N-~l~~~iP 508 (876)
T 4ecn_A 490 LKDLTDVELYNC-PNMTQLP 508 (876)
T ss_dssp CTTCCEEEEESC-TTCCSCC
T ss_pred CCCCCEEECcCC-CCCccCh
Confidence 788888888888 5555544
No 289
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=98.81 E-value=5.8e-09 Score=95.47 Aligned_cols=80 Identities=19% Similarity=0.196 Sum_probs=61.0
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceeccccc-ccccccCcccccCCCcccc
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPI-KGVFSNSSAISLDGNVNLC 79 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~-~~~~~~~~~~~~~~n~~l~ 79 (484)
|++|+|++..|..++.+++|+.|+|++|+|++..|..+..+++|+.|+|++|+|++.++. ...+++++.+++++| .+.
T Consensus 90 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N-~l~ 168 (251)
T 3m19_A 90 LANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTN-QLQ 168 (251)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS-CCS
T ss_pred CCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCC-cCC
Confidence 578888866666778888888888888888854445567888888888888888877774 466788888888888 555
Q ss_pred CC
Q 011508 80 GG 81 (484)
Q Consensus 80 g~ 81 (484)
+.
T Consensus 169 ~~ 170 (251)
T 3m19_A 169 SV 170 (251)
T ss_dssp CC
T ss_pred cc
Confidence 43
No 290
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=98.81 E-value=2.2e-09 Score=89.71 Aligned_cols=78 Identities=23% Similarity=0.225 Sum_probs=68.1
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceeccc--ccccccccCcccccCCCccc
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEV--PIKGVFSNSSAISLDGNVNL 78 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~--p~~~~~~~~~~~~~~~n~~l 78 (484)
|++|+|++. ..++++++|+.|+|++|++++.+|..+..+++|+.|+|++|++++.. +....+++++.+++++| .+
T Consensus 49 l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N-~l 125 (149)
T 2je0_A 49 TINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNC-EV 125 (149)
T ss_dssp CTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEECTTSCCCSHHHHGGGGGCTTCCEEECTTC-GG
T ss_pred CcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEECCCCcCCChHHHHHHhhCCCCCEEeCcCC-cc
Confidence 578999955 78999999999999999999889988888999999999999999854 45578899999999999 55
Q ss_pred cCC
Q 011508 79 CGG 81 (484)
Q Consensus 79 ~g~ 81 (484)
.+.
T Consensus 126 ~~~ 128 (149)
T 2je0_A 126 TNL 128 (149)
T ss_dssp GGS
T ss_pred cch
Confidence 544
No 291
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=98.81 E-value=4.6e-09 Score=100.21 Aligned_cols=73 Identities=18% Similarity=0.265 Sum_probs=54.4
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccc-cccccCcccccCCC
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIK-GVFSNSSAISLDGN 75 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n 75 (484)
|++|+|+ .+|..++++++|+.|+|++|+++ .+|..++++++|+.|+|++|++.+.+|.. ..+++++.+++++|
T Consensus 190 L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~-~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n 263 (328)
T 4fcg_A 190 LEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDC 263 (328)
T ss_dssp EEEECCC-CCCGGGGGCTTCCEEEEESSCCC-CCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTC
T ss_pred CcCCCcC-cchHhhcCCCCCCEEEccCCCCC-cCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCC
Confidence 3567777 77777777778888888888777 46767777777888888877777777653 56677777777777
No 292
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=98.81 E-value=7e-09 Score=91.95 Aligned_cols=79 Identities=20% Similarity=0.234 Sum_probs=62.0
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccc-cccccCcccccCCCcccc
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIK-GVFSNSSAISLDGNVNLC 79 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n~~l~ 79 (484)
|++|+|++..|..++.+++|++|+|++|+|++..|..+.++++|+.|+|++|+|++.++.. ..+++++.+++++| .+.
T Consensus 59 l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N-~l~ 137 (208)
T 2o6s_A 59 LGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQN-QLK 137 (208)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS-CCS
T ss_pred CCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCC-ccc
Confidence 5788888554556788999999999999999554455788999999999999998877753 66788888889888 454
Q ss_pred C
Q 011508 80 G 80 (484)
Q Consensus 80 g 80 (484)
+
T Consensus 138 ~ 138 (208)
T 2o6s_A 138 S 138 (208)
T ss_dssp C
T ss_pred e
Confidence 4
No 293
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=98.81 E-value=3.3e-09 Score=90.59 Aligned_cols=77 Identities=25% Similarity=0.335 Sum_probs=67.7
Q ss_pred CCCCccc-ccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccc-cccccCcccccCCCccc
Q 011508 1 MNGNFFQ-GNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIK-GVFSNSSAISLDGNVNL 78 (484)
Q Consensus 1 l~~n~l~-g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n~~l 78 (484)
|++|+++ |.+|..+..+++|+.|+|++|.+++ + ..+..+++|+.|+|++|++++.+|.. ..+++++.+++++| .+
T Consensus 31 l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N-~l 107 (168)
T 2ell_A 31 LDNCKSNDGKIEGLTAEFVNLEFLSLINVGLIS-V-SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGN-KL 107 (168)
T ss_dssp CCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCC-C-SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSS-SC
T ss_pred CCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCC-h-hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEeccCC-cc
Confidence 5789998 8999999999999999999999995 4 78999999999999999999977765 44899999999999 56
Q ss_pred cC
Q 011508 79 CG 80 (484)
Q Consensus 79 ~g 80 (484)
.+
T Consensus 108 ~~ 109 (168)
T 2ell_A 108 KD 109 (168)
T ss_dssp CS
T ss_pred Cc
Confidence 55
No 294
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=98.80 E-value=7.4e-09 Score=95.97 Aligned_cols=81 Identities=19% Similarity=0.205 Sum_probs=62.3
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccc-cccccCcccccCCCcccc
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIK-GVFSNSSAISLDGNVNLC 79 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n~~l~ 79 (484)
|++|++++..|..++++++|+.|+|++|++++..|..+..+++|+.|+|++|+|++.+|.. ..+++++.+++++| .+.
T Consensus 116 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N-~l~ 194 (272)
T 3rfs_A 116 LVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQN-QLK 194 (272)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS-CCS
T ss_pred CCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCC-cCC
Confidence 5778888666666788888888888888888655556788888888888888888777654 56778888888888 555
Q ss_pred CCC
Q 011508 80 GGI 82 (484)
Q Consensus 80 g~~ 82 (484)
+.+
T Consensus 195 ~~~ 197 (272)
T 3rfs_A 195 SVP 197 (272)
T ss_dssp CCC
T ss_pred ccC
Confidence 543
No 295
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=98.79 E-value=3.6e-09 Score=111.77 Aligned_cols=78 Identities=26% Similarity=0.321 Sum_probs=55.1
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccccccccCcccccCCCccccC
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIKGVFSNSSAISLDGNVNLCG 80 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~l~g 80 (484)
|++|+|+ .||.+|++|++|+.|||++|+|+ .||..|++|++|+.|+|++|.|+..++..+.+.+|+.|++++| .+.+
T Consensus 254 Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~L~~N-~l~~ 330 (727)
T 4b8c_D 254 LNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVTTLPWEFGNLCNLQFLGVEGN-PLEK 330 (727)
T ss_dssp CTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCCCCCSSTTSCTTCCCEECTTS-CCCS
T ss_pred eeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCCccChhhhcCCCccEEeCCCC-ccCC
Confidence 5677777 77777777777777777777777 7777777777777777777777644444566677777777777 4544
Q ss_pred C
Q 011508 81 G 81 (484)
Q Consensus 81 ~ 81 (484)
.
T Consensus 331 ~ 331 (727)
T 4b8c_D 331 Q 331 (727)
T ss_dssp H
T ss_pred C
Confidence 3
No 296
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=98.75 E-value=7.1e-09 Score=91.07 Aligned_cols=73 Identities=16% Similarity=0.192 Sum_probs=50.1
Q ss_pred CCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceeccccc-ccccccCcccccCCCc
Q 011508 2 NGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPI-KGVFSNSSAISLDGNV 76 (484)
Q Consensus 2 ~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~-~~~~~~~~~~~~~~n~ 76 (484)
++|+++ .++.++.+++|+.|+|++|++++..|..++.+++|+.|+|++|++++..|. ...+++++.+++++|.
T Consensus 74 ~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~ 147 (197)
T 4ezg_A 74 NNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNG 147 (197)
T ss_dssp ESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCT
T ss_pred cCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCC
Confidence 455443 334677777777777777777776777777777777777777777764443 3566777777777774
No 297
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=98.75 E-value=1.3e-08 Score=93.03 Aligned_cols=78 Identities=17% Similarity=0.167 Sum_probs=54.4
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccc-cccccCcccccCCCcccc
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIK-GVFSNSSAISLDGNVNLC 79 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n~~l~ 79 (484)
|++|++++..|..++++++|+.|+|++|+|++..|..+.++++|+.|+|++|+|++.++.. ..+++++.+++++| .+.
T Consensus 42 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N-~l~ 120 (251)
T 3m19_A 42 LQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGN-QLK 120 (251)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSS-CCC
T ss_pred ccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCC-cCC
Confidence 4667777666667777777777777777777666666777777777777777777666543 55667777777777 444
No 298
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=98.72 E-value=5.7e-09 Score=89.10 Aligned_cols=79 Identities=22% Similarity=0.199 Sum_probs=64.0
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceeccc--ccccccccCcccccCCCccc
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEV--PIKGVFSNSSAISLDGNVNL 78 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~--p~~~~~~~~~~~~~~~n~~l 78 (484)
|++|+|++. ..++.+++|+.|+|++|++++.+|..+.++++|+.|+|++|++++.. +....+++++.+++++| .+
T Consensus 56 l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N-~l 132 (168)
T 2ell_A 56 LINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNC-EV 132 (168)
T ss_dssp EESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSSSCCSSGGGGGGSSCSCCCEEECCSS-GG
T ss_pred CcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEeccCCccCcchhHHHHhcCCCCCEEEeeCC-cC
Confidence 467888854 77889999999999999999778888888999999999999998854 45567888999999998 45
Q ss_pred cCCC
Q 011508 79 CGGI 82 (484)
Q Consensus 79 ~g~~ 82 (484)
.+.+
T Consensus 133 ~~~~ 136 (168)
T 2ell_A 133 TNLN 136 (168)
T ss_dssp GTST
T ss_pred cchH
Confidence 5443
No 299
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=98.72 E-value=2.3e-08 Score=92.67 Aligned_cols=73 Identities=22% Similarity=0.261 Sum_probs=44.1
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccc-cccccCcccccCCC
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIK-GVFSNSSAISLDGN 75 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n 75 (484)
|++|++++ +| .++++++|++|+|++|++++..|..+.++++|+.|+|++|++++.+|.. ..+++++.+++++|
T Consensus 70 l~~n~l~~-~~-~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 143 (272)
T 3rfs_A 70 LGGNKLHD-IS-ALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHN 143 (272)
T ss_dssp CTTSCCCC-CG-GGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CCCCCCCC-ch-hhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCC
Confidence 45566663 33 5666666666666666666544444566666666666666666555542 45566666666666
No 300
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=98.72 E-value=1.3e-08 Score=101.70 Aligned_cols=81 Identities=21% Similarity=0.221 Sum_probs=62.3
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccc-cccccCcccccCCCcccc
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIK-GVFSNSSAISLDGNVNLC 79 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n~~l~ 79 (484)
|++|+|++..|..|.++++|+.|+|++|++++..|..+.++++|+.|+|++|+|++.++.. ..+++++.+++++||..|
T Consensus 225 Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 304 (452)
T 3zyi_A 225 MSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNC 304 (452)
T ss_dssp CTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEEC
T ss_pred CcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCC
Confidence 5677888777778888888888888888888777777888888888888888888766653 556778888888887666
Q ss_pred CC
Q 011508 80 GG 81 (484)
Q Consensus 80 g~ 81 (484)
..
T Consensus 305 dC 306 (452)
T 3zyi_A 305 DC 306 (452)
T ss_dssp ST
T ss_pred CC
Confidence 53
No 301
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=98.72 E-value=1.2e-08 Score=101.50 Aligned_cols=81 Identities=20% Similarity=0.208 Sum_probs=58.7
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccc-cccccCcccccCCCcccc
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIK-GVFSNSSAISLDGNVNLC 79 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n~~l~ 79 (484)
|++|+|++..|..|.++++|+.|+|++|++++..|..+.++++|+.|+|++|+|++.++.. ..+.+++.+++++||..|
T Consensus 214 Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 293 (440)
T 3zyj_A 214 LSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNC 293 (440)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEEC
T ss_pred CCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccC
Confidence 4677777666777777777777777777777666777777777777777777777666543 456777777788887666
Q ss_pred CC
Q 011508 80 GG 81 (484)
Q Consensus 80 g~ 81 (484)
+.
T Consensus 294 dC 295 (440)
T 3zyj_A 294 NC 295 (440)
T ss_dssp SS
T ss_pred CC
Confidence 43
No 302
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=98.71 E-value=2.4e-08 Score=88.49 Aligned_cols=80 Identities=19% Similarity=0.182 Sum_probs=67.7
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccc-cccccCcccccCCCcccc
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIK-GVFSNSSAISLDGNVNLC 79 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n~~l~ 79 (484)
|++|+|++..|..++++++|+.|+|++|+|++..+..+.++++|+.|+|++|+|++.++.. ..+++++.+++++| .+.
T Consensus 35 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N-~l~ 113 (208)
T 2o6s_A 35 LETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTN-QLQ 113 (208)
T ss_dssp CCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS-CCC
T ss_pred cCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCC-cCc
Confidence 6889999655567899999999999999999554555789999999999999999877764 67899999999999 555
Q ss_pred CC
Q 011508 80 GG 81 (484)
Q Consensus 80 g~ 81 (484)
+.
T Consensus 114 ~~ 115 (208)
T 2o6s_A 114 SL 115 (208)
T ss_dssp CC
T ss_pred cc
Confidence 43
No 303
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=98.71 E-value=1.9e-08 Score=94.12 Aligned_cols=78 Identities=23% Similarity=0.208 Sum_probs=64.1
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccc-cccccCcccccCCCcccc
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIK-GVFSNSSAISLDGNVNLC 79 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n~~l~ 79 (484)
|++|+|++..|..|+.+++|+.|+|++|+|++..|..+..+++|+.|+|++|+|++.++.. ..+++++.+++++| .+.
T Consensus 107 l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N-~l~ 185 (290)
T 1p9a_G 107 VSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQEN-SLY 185 (290)
T ss_dssp CCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSS-CCC
T ss_pred CCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCC-cCC
Confidence 6789999666678999999999999999999655566788999999999999999777654 56788888999888 444
No 304
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=98.70 E-value=1.8e-08 Score=100.76 Aligned_cols=79 Identities=27% Similarity=0.249 Sum_probs=58.6
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceeccccc-ccccccCcccccCCCcccc
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPI-KGVFSNSSAISLDGNVNLC 79 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~-~~~~~~~~~~~~~~n~~l~ 79 (484)
|++|++++..|..|+++++|+.|+|++|++++..|..+.++++|+.|+|++|++++.+|. ...+++++.+++++| .+.
T Consensus 306 Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N-~l~ 384 (455)
T 3v47_A 306 LAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTN-QLK 384 (455)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS-CCS
T ss_pred CCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCC-ccc
Confidence 567778777777788888888888888888766677777788888888888888777664 356777777777777 444
Q ss_pred C
Q 011508 80 G 80 (484)
Q Consensus 80 g 80 (484)
+
T Consensus 385 ~ 385 (455)
T 3v47_A 385 S 385 (455)
T ss_dssp C
T ss_pred c
Confidence 4
No 305
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=98.70 E-value=7.9e-09 Score=107.82 Aligned_cols=77 Identities=12% Similarity=0.150 Sum_probs=69.0
Q ss_pred CCcccccCchhhhCCCCCCEEeCcCCccccc-----------------cCcccc--CCCCCCeeeccccceecccccc-c
Q 011508 3 GNFFQGNIPSSLSSLRGIENLDLSQNNLSGR-----------------IPKYLE--NFPFLQNLNLSFNHFEGEVPIK-G 62 (484)
Q Consensus 3 ~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~-----------------~p~~~~--~l~~L~~l~ls~N~l~g~~p~~-~ 62 (484)
+|+|+| ||.+++++++|++|+|++|+|+|. +|..++ ++++|+.|+|++|++.|.+|.. .
T Consensus 192 ~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~ 270 (636)
T 4eco_A 192 SNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLK 270 (636)
T ss_dssp SCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTT
T ss_pred cCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHh
Confidence 689998 999999999999999999999986 999999 9999999999999999988864 7
Q ss_pred ccccCcccccCCCccccC
Q 011508 63 VFSNSSAISLDGNVNLCG 80 (484)
Q Consensus 63 ~~~~~~~~~~~~n~~l~g 80 (484)
.+++++.+++++|..+.|
T Consensus 271 ~l~~L~~L~Ls~n~~l~~ 288 (636)
T 4eco_A 271 ALPEMQLINVACNRGISG 288 (636)
T ss_dssp TCSSCCEEECTTCTTSCH
T ss_pred cCCCCCEEECcCCCCCcc
Confidence 788999999999953666
No 306
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=98.69 E-value=1.9e-08 Score=106.24 Aligned_cols=106 Identities=15% Similarity=0.121 Sum_probs=81.3
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccccccccCcccccCCCccccC
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIKGVFSNSSAISLDGNVNLCG 80 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~l~g 80 (484)
|++|+|. .||..+++|++|+.|+|++|+|+ .||..|++|++|+.|+|++|+|+..++..+.+.+|..|++++| .+.
T Consensus 231 Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~L~~N-~l~- 306 (727)
T 4b8c_D 231 LSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLTSLPAELGSCFQLKYFYFFDN-MVT- 306 (727)
T ss_dssp CTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCSSCCSSGGGGTTCSEEECCSS-CCC-
T ss_pred CCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCCccChhhcCCCCCCEEECCCC-CCC-
Confidence 6889998 99999999999999999999999 9999999999999999999999955445688899999999999 554
Q ss_pred CCccccccccccccccccccccceEEehhhh
Q 011508 81 GISELHLCTCSTKESKQSRSRSLKLIIPIVT 111 (484)
Q Consensus 81 ~~~~~~~~~c~~~~~~~~~~~~~~~~i~~v~ 111 (484)
..+. ....+........+.+.+...++..+
T Consensus 307 ~lp~-~~~~l~~L~~L~L~~N~l~~~~p~~~ 336 (727)
T 4b8c_D 307 TLPW-EFGNLCNLQFLGVEGNPLEKQFLKIL 336 (727)
T ss_dssp CCCS-STTSCTTCCCEECTTSCCCSHHHHHH
T ss_pred ccCh-hhhcCCCccEEeCCCCccCCCChHHH
Confidence 2222 13344444444555555544444333
No 307
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=98.69 E-value=3.6e-08 Score=102.71 Aligned_cols=79 Identities=18% Similarity=0.083 Sum_probs=62.0
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccc-cccccCcccccCCCcccc
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIK-GVFSNSSAISLDGNVNLC 79 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n~~l~ 79 (484)
|++|+|++..|.+|++|++|++|||++|+|++..|.+|.+|++|+.|+|++|+|++.+|.. ..+.+|+.+++++| .+.
T Consensus 59 Ls~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N-~l~ 137 (635)
T 4g8a_A 59 LSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVET-NLA 137 (635)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTS-CCC
T ss_pred eeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCC-cCC
Confidence 6788888555567888888888888888888655667888888888888888888777653 66778888888887 444
Q ss_pred C
Q 011508 80 G 80 (484)
Q Consensus 80 g 80 (484)
+
T Consensus 138 ~ 138 (635)
T 4g8a_A 138 S 138 (635)
T ss_dssp C
T ss_pred C
Confidence 3
No 308
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=98.69 E-value=1.4e-08 Score=94.79 Aligned_cols=79 Identities=20% Similarity=0.189 Sum_probs=57.8
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccc-cccccCcccccCCCcccc
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIK-GVFSNSSAISLDGNVNLC 79 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n~~l~ 79 (484)
|++|++++..|..++.+++|+.|+|++|++++..+..+..+++|+.|+|++|++++..|.. ..+++++.+++++| .+.
T Consensus 136 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n-~l~ 214 (285)
T 1ozn_A 136 LQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFAN-NLS 214 (285)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS-CCS
T ss_pred CCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCC-cCC
Confidence 5678887555556788888888888888888544445778888888888888888776643 56677888888887 454
Q ss_pred C
Q 011508 80 G 80 (484)
Q Consensus 80 g 80 (484)
+
T Consensus 215 ~ 215 (285)
T 1ozn_A 215 A 215 (285)
T ss_dssp C
T ss_pred c
Confidence 4
No 309
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=98.68 E-value=1.4e-08 Score=96.76 Aligned_cols=82 Identities=15% Similarity=0.151 Sum_probs=73.2
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccc-cccccCcccccCCCcccc
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIK-GVFSNSSAISLDGNVNLC 79 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n~~l~ 79 (484)
|++|+++ .+|..++++++|+.|+|++|++.|.+|..++++++|+.|+|++|++.+.+|.. ..+++++.+++++| .+.
T Consensus 213 L~~N~l~-~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n-~~~ 290 (328)
T 4fcg_A 213 IRNSPLS-ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGC-VNL 290 (328)
T ss_dssp EESSCCC-CCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTC-TTC
T ss_pred ccCCCCC-cCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCC-Cch
Confidence 4789999 68889999999999999999999999999999999999999999999999864 77899999999999 455
Q ss_pred CCCcc
Q 011508 80 GGISE 84 (484)
Q Consensus 80 g~~~~ 84 (484)
+..|.
T Consensus 291 ~~iP~ 295 (328)
T 4fcg_A 291 SRLPS 295 (328)
T ss_dssp CCCCG
T ss_pred hhccH
Confidence 55543
No 310
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=98.67 E-value=2.9e-08 Score=91.88 Aligned_cols=79 Identities=20% Similarity=0.235 Sum_probs=60.1
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceeccccc-ccccccCcccccCCCcccc
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPI-KGVFSNSSAISLDGNVNLC 79 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~-~~~~~~~~~~~~~~n~~l~ 79 (484)
|++|++++..|..++++++|+.|+|++|+|++..+..+..+++|+.|+|++|++++.++. ...+++++.+++++| .+.
T Consensus 116 l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N-~l~ 194 (270)
T 2o6q_A 116 LDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNN-QLK 194 (270)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSS-CCS
T ss_pred CCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCC-cCC
Confidence 577888866666788888888888888888854444578888888888888888877664 356778888888888 444
Q ss_pred C
Q 011508 80 G 80 (484)
Q Consensus 80 g 80 (484)
+
T Consensus 195 ~ 195 (270)
T 2o6q_A 195 R 195 (270)
T ss_dssp C
T ss_pred c
Confidence 3
No 311
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=98.67 E-value=1.9e-08 Score=104.47 Aligned_cols=75 Identities=24% Similarity=0.224 Sum_probs=53.4
Q ss_pred CCCCccccc-CchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccc-cccccCcccccCCC
Q 011508 1 MNGNFFQGN-IPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIK-GVFSNSSAISLDGN 75 (484)
Q Consensus 1 l~~n~l~g~-~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n 75 (484)
|++|++++. +|..++.+++|+.|+|++|++++..|..+.++++|+.|+|++|++++.+|.. ..+++++.+++++|
T Consensus 455 l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N 531 (606)
T 3vq2_A 455 MAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFN 531 (606)
T ss_dssp CTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTS
T ss_pred CCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCC
Confidence 466777763 6667777777777777777777766777777777777777777777765543 55667777777777
No 312
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=98.66 E-value=6.3e-09 Score=112.32 Aligned_cols=77 Identities=25% Similarity=0.336 Sum_probs=62.2
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccccccccCcccccCCCccccC
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIKGVFSNSSAISLDGNVNLCG 80 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~l~g 80 (484)
|++|+|++..|..++.+++|+.|+|++|+|++..|..+. ++|+.|+|++|+|+|.+|.. +.++..+++++||..|.
T Consensus 487 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~--~~~L~~l~l~~Np~~C~ 562 (844)
T 3j0a_A 487 LNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDV--FVSLSVLDITHNKFICE 562 (844)
T ss_dssp CCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCC--CSSCCEEEEEEECCCCS
T ss_pred CCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhH--hCCcCEEEecCCCcccc
Confidence 577888877777788889999999999998854444444 78899999999998888853 67889999999998885
Q ss_pred C
Q 011508 81 G 81 (484)
Q Consensus 81 ~ 81 (484)
.
T Consensus 563 c 563 (844)
T 3j0a_A 563 C 563 (844)
T ss_dssp S
T ss_pred c
Confidence 4
No 313
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=98.64 E-value=3.4e-08 Score=93.14 Aligned_cols=81 Identities=28% Similarity=0.359 Sum_probs=66.2
Q ss_pred CCCCcccc-cCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceeccccc-ccccccCcccccCCCccc
Q 011508 1 MNGNFFQG-NIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPI-KGVFSNSSAISLDGNVNL 78 (484)
Q Consensus 1 l~~n~l~g-~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~-~~~~~~~~~~~~~~n~~l 78 (484)
|++|++++ .+|..++.+++|+.|+|++|++++..|..+.++++|+.|+|++|++++..+. ...+++++.+++++| .+
T Consensus 157 l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N-~l 235 (306)
T 2z66_A 157 MAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLN-HI 235 (306)
T ss_dssp CTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTS-CC
T ss_pred CCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCC-CC
Confidence 57888886 5788899999999999999999977788888899999999999999887663 356788888999988 55
Q ss_pred cCCC
Q 011508 79 CGGI 82 (484)
Q Consensus 79 ~g~~ 82 (484)
.+..
T Consensus 236 ~~~~ 239 (306)
T 2z66_A 236 MTSK 239 (306)
T ss_dssp CBCS
T ss_pred cccC
Confidence 5543
No 314
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=98.64 E-value=1.5e-08 Score=108.45 Aligned_cols=77 Identities=12% Similarity=0.078 Sum_probs=68.8
Q ss_pred CCcccccCchhhhCCCCCCEEeCcCCcccc-----------------ccCcccc--CCCCCCeeeccccceecccccc-c
Q 011508 3 GNFFQGNIPSSLSSLRGIENLDLSQNNLSG-----------------RIPKYLE--NFPFLQNLNLSFNHFEGEVPIK-G 62 (484)
Q Consensus 3 ~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g-----------------~~p~~~~--~l~~L~~l~ls~N~l~g~~p~~-~ 62 (484)
.|+|+| ||.+|++|++|+.|+|++|+|+| .||..++ +|++|+.|+|++|++.|.+|.. .
T Consensus 434 ~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~ 512 (876)
T 4ecn_A 434 TNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLY 512 (876)
T ss_dssp SCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGG
T ss_pred cCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHh
Confidence 589997 99999999999999999999998 4999988 9999999999999999998864 7
Q ss_pred ccccCcccccCCCccccC
Q 011508 63 VFSNSSAISLDGNVNLCG 80 (484)
Q Consensus 63 ~~~~~~~~~~~~n~~l~g 80 (484)
.+++|+.+++++|..+.|
T Consensus 513 ~L~~L~~L~Ls~N~~lsg 530 (876)
T 4ecn_A 513 DLPELQSLNIACNRGISA 530 (876)
T ss_dssp GCSSCCEEECTTCTTSCH
T ss_pred CCCCCCEEECcCCCCccc
Confidence 788999999999954666
No 315
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=98.64 E-value=9.5e-08 Score=88.60 Aligned_cols=79 Identities=18% Similarity=0.071 Sum_probs=64.9
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceeccccc-ccccccCcccccCCCcccc
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPI-KGVFSNSSAISLDGNVNLC 79 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~-~~~~~~~~~~~~~~n~~l~ 79 (484)
|++|++++..|..++++++|+.|+|++|++++..|..+.++++|+.|+|++|++++..|. ...+.+++.+++++| .+.
T Consensus 35 ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n-~l~ 113 (276)
T 2z62_A 35 LSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVET-NLA 113 (276)
T ss_dssp CTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTS-CCC
T ss_pred CCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCC-Ccc
Confidence 578899866666899999999999999999966666888999999999999999887765 366788888888888 444
Q ss_pred C
Q 011508 80 G 80 (484)
Q Consensus 80 g 80 (484)
+
T Consensus 114 ~ 114 (276)
T 2z62_A 114 S 114 (276)
T ss_dssp C
T ss_pred c
Confidence 3
No 316
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=98.63 E-value=1.9e-08 Score=86.65 Aligned_cols=73 Identities=16% Similarity=0.180 Sum_probs=60.7
Q ss_pred CCCCcccccCchhhhCCC-CCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccc-cccccCcccccCCCccc
Q 011508 1 MNGNFFQGNIPSSLSSLR-GIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIK-GVFSNSSAISLDGNVNL 78 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~-~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n~~l 78 (484)
|++|+++ .+|. +..+. +|+.|+|++|+|++ + ..+..+++|+.|+|++|+|++.+|.. ..+++++.+++++| .+
T Consensus 26 l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~-~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N-~i 100 (176)
T 1a9n_A 26 LRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRK-L-DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNN-SL 100 (176)
T ss_dssp CTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCE-E-CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSC-CC
T ss_pred eeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCc-c-cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCC-cC
Confidence 5789998 6765 55554 99999999999995 4 67899999999999999999877665 67889999999999 44
No 317
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=98.63 E-value=4.1e-08 Score=94.99 Aligned_cols=78 Identities=21% Similarity=0.166 Sum_probs=60.6
Q ss_pred CCCCcccccCchhhh-CCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceeccccc-ccccccCcccccCCCccc
Q 011508 1 MNGNFFQGNIPSSLS-SLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPI-KGVFSNSSAISLDGNVNL 78 (484)
Q Consensus 1 l~~n~l~g~~p~~~~-~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~-~~~~~~~~~~~~~~n~~l 78 (484)
|++|+|++..+..+. ++++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++.++. ...+.+|+.|++++| .+
T Consensus 46 Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N-~i 124 (361)
T 2xot_A 46 LSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNN-HI 124 (361)
T ss_dssp CCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS-CC
T ss_pred CCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCC-cc
Confidence 578888865566666 888888888888888866666788888888888888888877664 356778888888888 44
Q ss_pred c
Q 011508 79 C 79 (484)
Q Consensus 79 ~ 79 (484)
.
T Consensus 125 ~ 125 (361)
T 2xot_A 125 V 125 (361)
T ss_dssp C
T ss_pred c
Confidence 3
No 318
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=98.62 E-value=4.7e-08 Score=91.39 Aligned_cols=72 Identities=24% Similarity=0.335 Sum_probs=46.9
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceeccccc-ccccccCcccccCCC
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPI-KGVFSNSSAISLDGN 75 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~-~~~~~~~~~~~~~~n 75 (484)
|++|+|+ .+|.. +.+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|++.+|. ...+.+++.+++++|
T Consensus 62 L~~n~l~-~~~~~-~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N 134 (290)
T 1p9a_G 62 LDRAELT-KLQVD-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGN 134 (290)
T ss_dssp CTTSCCC-EEECC-SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTS
T ss_pred CCCCccC-cccCC-CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCC
Confidence 4566666 34443 66677777777777776 6666666677777777777777666554 255666667777666
No 319
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=98.62 E-value=7.5e-08 Score=99.94 Aligned_cols=75 Identities=19% Similarity=0.093 Sum_probs=44.5
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceeccccc-ccccccCcccccCCC
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPI-KGVFSNSSAISLDGN 75 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~-~~~~~~~~~~~~~~n 75 (484)
|++|++++..|..|+++++|++|+|++|++++..|.+|.++++|+.|+|++|++++..|. ...+.+++.+++++|
T Consensus 39 Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n 114 (606)
T 3vq2_A 39 LSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVET 114 (606)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTS
T ss_pred CCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCC
Confidence 455666655555666666666666666666655555566666666666666666665443 245555555555555
No 320
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=98.59 E-value=4.8e-08 Score=92.12 Aligned_cols=79 Identities=18% Similarity=0.275 Sum_probs=70.7
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCcccc-ccCccccCCCCCCeeeccccceecccccc-cccccCcccccCCCccc
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSG-RIPKYLENFPFLQNLNLSFNHFEGEVPIK-GVFSNSSAISLDGNVNL 78 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g-~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n~~l 78 (484)
|++|++++.+|..++.+++|+.|+|++|.+++ .+|..+..+++|+.|+|++|++++.+|.. ..+++++.+++++| .+
T Consensus 133 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N-~l 211 (306)
T 2z66_A 133 ISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHN-NF 211 (306)
T ss_dssp CTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTS-CC
T ss_pred CCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCC-cc
Confidence 57899998899999999999999999999997 68999999999999999999999987754 67889999999999 45
Q ss_pred cC
Q 011508 79 CG 80 (484)
Q Consensus 79 ~g 80 (484)
.+
T Consensus 212 ~~ 213 (306)
T 2z66_A 212 FS 213 (306)
T ss_dssp SB
T ss_pred Cc
Confidence 44
No 321
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=98.58 E-value=6.1e-08 Score=99.31 Aligned_cols=79 Identities=19% Similarity=0.115 Sum_probs=69.4
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceeccccc-ccccccCcccccCCCcccc
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPI-KGVFSNSSAISLDGNVNLC 79 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~-~~~~~~~~~~~~~~n~~l~ 79 (484)
|++|++++..|.+|+++++|++|+|++|++++..|..++++++|+.|+|++|++++.+|. ...+++++.+++++| .+.
T Consensus 33 Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n-~l~ 111 (549)
T 2z81_A 33 LSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGN-PYQ 111 (549)
T ss_dssp CCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTC-CCS
T ss_pred CcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCC-ccc
Confidence 678999988888999999999999999999987788899999999999999999988886 577889999999999 454
Q ss_pred C
Q 011508 80 G 80 (484)
Q Consensus 80 g 80 (484)
+
T Consensus 112 ~ 112 (549)
T 2z81_A 112 T 112 (549)
T ss_dssp S
T ss_pred c
Confidence 3
No 322
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=98.58 E-value=4.3e-08 Score=100.88 Aligned_cols=81 Identities=17% Similarity=0.240 Sum_probs=61.7
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccc-cccCccccCCCCCCeeeccccceecccccc-cccccCcccccCCCccc
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLS-GRIPKYLENFPFLQNLNLSFNHFEGEVPIK-GVFSNSSAISLDGNVNL 78 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~-g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n~~l 78 (484)
|++|++++.+|..++.+++|+.|+|++|+++ |.+|..+..+++|+.|+|++|++++.+|.. ..+++++.+++++| .+
T Consensus 428 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n-~l 506 (570)
T 2z63_A 428 ISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASN-QL 506 (570)
T ss_dssp CTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS-CC
T ss_pred CcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCC-cC
Confidence 5678888777888888888888888888887 578888888888888888888888776643 56777888888887 55
Q ss_pred cCCC
Q 011508 79 CGGI 82 (484)
Q Consensus 79 ~g~~ 82 (484)
.+.+
T Consensus 507 ~~~~ 510 (570)
T 2z63_A 507 KSVP 510 (570)
T ss_dssp SCCC
T ss_pred CCCC
Confidence 5543
No 323
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=98.58 E-value=3.4e-08 Score=102.50 Aligned_cols=74 Identities=23% Similarity=0.296 Sum_probs=38.1
Q ss_pred CCCCccccc---CchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccc-cccccCcccccCCC
Q 011508 1 MNGNFFQGN---IPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIK-GVFSNSSAISLDGN 75 (484)
Q Consensus 1 l~~n~l~g~---~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n 75 (484)
|++|++++. .+..++.+++|+.|+|++|++++..|..+.++++|+.|+|++|++++.+|.. ..++++ .+++++|
T Consensus 456 L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N 533 (606)
T 3t6q_A 456 LQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASN 533 (606)
T ss_dssp CTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSS
T ss_pred CCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCC
Confidence 345555542 1234555555555555555555555555555555555555555555554432 334444 4555555
No 324
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=98.58 E-value=6.2e-08 Score=98.59 Aligned_cols=77 Identities=19% Similarity=0.144 Sum_probs=65.7
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccccccccCcccccCCCccccC
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIKGVFSNSSAISLDGNVNLCG 80 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~l~g 80 (484)
|++|++++..|..|+++++|++|+|++|++++..|..++++++|+.|+|++|+|+. +|.. .+.+++.+++++| .+.+
T Consensus 28 Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~-~l~~L~~L~L~~N-~l~~ 104 (520)
T 2z7x_B 28 ISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVK-ISCH-PTVNLKHLDLSFN-AFDA 104 (520)
T ss_dssp CCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCCE-EECC-CCCCCSEEECCSS-CCSS
T ss_pred CCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCceee-cCcc-ccCCccEEeccCC-cccc
Confidence 67899997777889999999999999999998778899999999999999999985 4444 7889999999999 4544
No 325
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=98.57 E-value=4.9e-08 Score=85.64 Aligned_cols=79 Identities=15% Similarity=0.249 Sum_probs=70.5
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccccccccCcccccCCCccccC
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIKGVFSNSSAISLDGNVNLCG 80 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~l~g 80 (484)
|++|++++..|..++.+++|+.|+|++|++++..|..++++++|+.|+|++|++.+.+|....+++++.+++++| .+.+
T Consensus 95 l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~~l~~l~~L~~L~l~~n-~i~~ 173 (197)
T 4ezg_A 95 IMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIMPLKTLPELKSLNIQFD-GVHD 173 (197)
T ss_dssp EECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCGGGGGCSSCCEEECTTB-CCCC
T ss_pred eECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccHhhcCCCCCCEEECCCC-CCcC
Confidence 468999988999999999999999999999998999999999999999999995556677788899999999999 4554
No 326
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=98.57 E-value=6.5e-08 Score=96.64 Aligned_cols=80 Identities=19% Similarity=0.162 Sum_probs=71.5
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccc-cccccCcccccCCCcccc
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIK-GVFSNSSAISLDGNVNLC 79 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n~~l~ 79 (484)
|++|++++.+|..++++++|+.|+|++|++++..|..+.++++|+.|+|++|++++.+|.. ..+++++.+++++| .+.
T Consensus 282 l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N-~l~ 360 (455)
T 3v47_A 282 LSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYN-HIR 360 (455)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSS-CCC
T ss_pred ecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCC-ccc
Confidence 5789999999999999999999999999999888889999999999999999999887754 67889999999999 555
Q ss_pred CC
Q 011508 80 GG 81 (484)
Q Consensus 80 g~ 81 (484)
+.
T Consensus 361 ~~ 362 (455)
T 3v47_A 361 AL 362 (455)
T ss_dssp EE
T ss_pred cc
Confidence 44
No 327
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.56 E-value=2.3e-07 Score=88.04 Aligned_cols=137 Identities=16% Similarity=0.127 Sum_probs=98.1
Q ss_pred CCCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCC--C--CceeEeeeeeeeccCCC
Q 011508 160 GFSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRH--R--NLVKIITSCVSVDFQGN 235 (484)
Q Consensus 160 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h--~--niv~~~~~~~~~~~~~~ 235 (484)
.....+.++.|....||+. +..+++|+.... .....+.+|.+++..+.+ . .+.+++++
T Consensus 38 ~i~~v~~l~~G~~n~vy~v-------g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~--------- 99 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC-------NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ--------- 99 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE-------TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE---------
T ss_pred ceEEEEeCCCCCCceEEEE-------CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec---------
Confidence 4555678999999999987 234788876321 223568899999988865 1 23344433
Q ss_pred ceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC---------------------------
Q 011508 236 DFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCE--------------------------- 288 (484)
Q Consensus 236 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~--------------------------- 288 (484)
+..++||||++|.++..... ..++..+...++.++++.++.||....
T Consensus 100 ~~~~lvme~i~G~~l~~~~~------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (320)
T 3r70_A 100 SDRFNIMKYIKGERITYEQY------HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLIS 173 (320)
T ss_dssp CSSCEEEECCCCBCCCHHHH------TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHH
T ss_pred CCcEEEEeecCCcccccccc------ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHH
Confidence 24589999999988864321 125667777888888888888885321
Q ss_pred ---------------------------------CCeeecCCCCCCeeecCCCceEEcccCccccc
Q 011508 289 ---------------------------------TPIVHCDLKPSNVLLDGELTAHVSDFGLAKFL 320 (484)
Q Consensus 289 ---------------------------------~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~ 320 (484)
..++|+|++|.||+++++..+.|+||+.+...
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 174 ILEKEQLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp HHHHTTCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred HHhhcccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 23599999999999998766799999988654
No 328
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=98.56 E-value=6.1e-08 Score=93.75 Aligned_cols=80 Identities=18% Similarity=0.095 Sum_probs=69.1
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceeccccc-ccccccCcccccCCCcccc
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPI-KGVFSNSSAISLDGNVNLC 79 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~-~~~~~~~~~~~~~~n~~l~ 79 (484)
|++|+|++..|..|+++++|+.|+|++|+|++..|..+.++++|+.|+|++|+|++..|. ...+.+|+.|++++| .+.
T Consensus 71 L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N-~l~ 149 (361)
T 2xot_A 71 LSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQN-QIS 149 (361)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS-CCC
T ss_pred CCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCC-cCC
Confidence 689999977677899999999999999999966666789999999999999999988765 367889999999999 555
Q ss_pred CC
Q 011508 80 GG 81 (484)
Q Consensus 80 g~ 81 (484)
+-
T Consensus 150 ~l 151 (361)
T 2xot_A 150 RF 151 (361)
T ss_dssp SC
T ss_pred ee
Confidence 43
No 329
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=98.55 E-value=1.1e-07 Score=88.70 Aligned_cols=79 Identities=20% Similarity=0.246 Sum_probs=64.2
Q ss_pred CCCCc-ccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceeccccc-ccccccCcccccCCCccc
Q 011508 1 MNGNF-FQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPI-KGVFSNSSAISLDGNVNL 78 (484)
Q Consensus 1 l~~n~-l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~-~~~~~~~~~~~~~~n~~l 78 (484)
|++|+ ++...|..++.+++|+.|+|++|++++..|..+.++++|+.|+|++|++++.++. ...+++++.+++++| .+
T Consensus 87 l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n-~l 165 (285)
T 1ozn_A 87 LSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGN-RI 165 (285)
T ss_dssp CCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS-CC
T ss_pred CCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCC-cc
Confidence 56786 7655577889999999999999999977788888899999999999999877765 366788889999888 44
Q ss_pred cC
Q 011508 79 CG 80 (484)
Q Consensus 79 ~g 80 (484)
.+
T Consensus 166 ~~ 167 (285)
T 1ozn_A 166 SS 167 (285)
T ss_dssp CE
T ss_pred cc
Confidence 43
No 330
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=98.55 E-value=6.1e-08 Score=91.63 Aligned_cols=76 Identities=24% Similarity=0.236 Sum_probs=60.1
Q ss_pred CCCCcccccCch----hhhCCCCCCEEeCcCCccccccCccccCC---CCCCeeeccccceecccccccccccCcccccC
Q 011508 1 MNGNFFQGNIPS----SLSSLRGIENLDLSQNNLSGRIPKYLENF---PFLQNLNLSFNHFEGEVPIKGVFSNSSAISLD 73 (484)
Q Consensus 1 l~~n~l~g~~p~----~~~~l~~l~~l~ls~N~l~g~~p~~~~~l---~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~ 73 (484)
|++|+|+ .+|. .++++++|+.|||++|+|++.+|..+..+ ++|+.|+|++|+|+. +|... +++++.++++
T Consensus 204 Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~~-lp~~~-~~~L~~L~Ls 280 (310)
T 4glp_A 204 LRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQ-VPKGL-PAKLRVLDLS 280 (310)
T ss_dssp CCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCCS-CCSCC-CSCCSCEECC
T ss_pred CCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCCc-hhhhh-cCCCCEEECC
Confidence 5788887 4454 25788999999999999998878888777 699999999999994 45432 4789999999
Q ss_pred CCccccC
Q 011508 74 GNVNLCG 80 (484)
Q Consensus 74 ~n~~l~g 80 (484)
+| .+.+
T Consensus 281 ~N-~l~~ 286 (310)
T 4glp_A 281 SN-RLNR 286 (310)
T ss_dssp SC-CCCS
T ss_pred CC-cCCC
Confidence 99 5665
No 331
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=98.54 E-value=1.1e-07 Score=97.63 Aligned_cols=77 Identities=17% Similarity=0.110 Sum_probs=60.8
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccccccccCcccccCCCccccC
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIKGVFSNSSAISLDGNVNLCG 80 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~l~g 80 (484)
|++|+|++..|..|+++++|+.|+|++|++++..|..+.++++|+.|+|++|+|+. +|.. .+.+++.+++++| .+.+
T Consensus 59 Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~-~l~~L~~L~Ls~N-~l~~ 135 (562)
T 3a79_B 59 LSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQN-ISCC-PMASLRHLDLSFN-DFDV 135 (562)
T ss_dssp CCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCCE-ECSC-CCTTCSEEECCSS-CCSB
T ss_pred CCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCCc-cCcc-ccccCCEEECCCC-Cccc
Confidence 57888886666788888888888888888887778888888888888888888884 4444 6888888888888 4443
No 332
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=98.54 E-value=8.8e-08 Score=96.48 Aligned_cols=77 Identities=25% Similarity=0.134 Sum_probs=67.8
Q ss_pred CCCCcccccCchhhh-CCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccccccccCcccccCCCcccc
Q 011508 1 MNGNFFQGNIPSSLS-SLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIKGVFSNSSAISLDGNVNLC 79 (484)
Q Consensus 1 l~~n~l~g~~p~~~~-~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~l~ 79 (484)
|++|+|++.+|..++ ++++|+.|+|++|.|++. |. +..+++|+.|+|++|+|++.+|....++++..+++++| .+.
T Consensus 151 Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N-~l~ 227 (487)
T 3oja_A 151 LKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNN-KLV 227 (487)
T ss_dssp CTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTS-CCC
T ss_pred CCCCCCCCcChHHHhhhCCcccEEecCCCccccc-cc-cccCCCCCEEECCCCCCCCCCHhHcCCCCccEEEecCC-cCc
Confidence 689999999999887 899999999999999965 43 44699999999999999999888888899999999999 566
Q ss_pred C
Q 011508 80 G 80 (484)
Q Consensus 80 g 80 (484)
+
T Consensus 228 ~ 228 (487)
T 3oja_A 228 L 228 (487)
T ss_dssp E
T ss_pred c
Confidence 5
No 333
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=98.54 E-value=1e-07 Score=90.90 Aligned_cols=75 Identities=25% Similarity=0.238 Sum_probs=48.7
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccccccccCcccccCCC
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIKGVFSNSSAISLDGN 75 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n 75 (484)
|++|++++..|..++.+++|+.|+|++|++++..|..+..+++|+.|+|++|+|+..++....+++++.+++++|
T Consensus 199 l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~L~~L~l~~N 273 (330)
T 1xku_A 199 LDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLADHKYIQVVYLHNN 273 (330)
T ss_dssp CTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCSSCCTTTTTCSSCCEEECCSS
T ss_pred CCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCccCChhhccCCCcCEEECCCC
Confidence 456666665566667777777777777777655555666667777777777776644444455666666777666
No 334
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=98.54 E-value=1.4e-07 Score=89.94 Aligned_cols=79 Identities=19% Similarity=0.127 Sum_probs=64.3
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccccccccCcccccCCCccccC
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIKGVFSNSSAISLDGNVNLCG 80 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~l~g 80 (484)
|++|++++..|..++.+++|+.|+|++|++++..|..+..+++|+.|+|++|+|+..++....+++++.+++++| .+.+
T Consensus 200 l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~L~~L~l~~N-~l~~ 278 (332)
T 2ft3_A 200 LDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLSRVPAGLPDLKLLQVVYLHTN-NITK 278 (332)
T ss_dssp CCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCCBCCTTGGGCTTCCEEECCSS-CCCB
T ss_pred CCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCeecChhhhcCccCCEEECCCC-CCCc
Confidence 578888877778889999999999999999976667888889999999999999855555577888888999888 4443
No 335
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=98.53 E-value=4e-08 Score=84.49 Aligned_cols=75 Identities=17% Similarity=0.184 Sum_probs=62.9
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCcc-ccCCCCCCeeeccccceecccc--cccccccCcccccCCCcc
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKY-LENFPFLQNLNLSFNHFEGEVP--IKGVFSNSSAISLDGNVN 77 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~-~~~l~~L~~l~ls~N~l~g~~p--~~~~~~~~~~~~~~~n~~ 77 (484)
|++|+|++ + ..++.+++|+.|+|++|+|+ .+|.. +..+++|+.|+|++|+|+..++ ....+++++.+++++|+
T Consensus 49 Ls~N~l~~-~-~~l~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~l~~N~- 124 (176)
T 1a9n_A 49 FSDNEIRK-L-DGFPLLRRLKTLLVNNNRIC-RIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNP- 124 (176)
T ss_dssp CCSSCCCE-E-CCCCCCSSCCEEECCSSCCC-EECSCHHHHCTTCCEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSG-
T ss_pred CCCCCCCc-c-cccccCCCCCEEECCCCccc-ccCcchhhcCCCCCEEECCCCcCCcchhhHhhhcCCCCCEEEecCCC-
Confidence 68999995 4 67999999999999999999 45654 4899999999999999976444 45678899999999994
Q ss_pred cc
Q 011508 78 LC 79 (484)
Q Consensus 78 l~ 79 (484)
++
T Consensus 125 i~ 126 (176)
T 1a9n_A 125 VT 126 (176)
T ss_dssp GG
T ss_pred CC
Confidence 44
No 336
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=98.53 E-value=7.5e-08 Score=96.86 Aligned_cols=73 Identities=19% Similarity=0.189 Sum_probs=43.3
Q ss_pred CCCcccccCc-hhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccc-cccccCcccccCCC
Q 011508 2 NGNFFQGNIP-SSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIK-GVFSNSSAISLDGN 75 (484)
Q Consensus 2 ~~n~l~g~~p-~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n 75 (484)
++|+|+ .+| ..++++++|+.|+|++|++++..+..+.++++|+.|+|++|++++..|.. ..+++|+.+++++|
T Consensus 232 ~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 306 (477)
T 2id5_A 232 THCNLT-AVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGN 306 (477)
T ss_dssp ESSCCC-SCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSS
T ss_pred cCCccc-ccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCC
Confidence 456666 344 45666666666666666666555555666666666666666666655432 44555666666666
No 337
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=98.53 E-value=9.7e-08 Score=98.87 Aligned_cols=75 Identities=17% Similarity=0.146 Sum_probs=45.1
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccc-cccccCcccccCCC
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIK-GVFSNSSAISLDGN 75 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n 75 (484)
|++|+|++..|..|+.+++|+.|+|++|.|++..|..++++++|+.|+|++|.|++.++.. ..+++|+.+++++|
T Consensus 82 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N 157 (597)
T 3oja_B 82 LNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNN 157 (597)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCC
Confidence 4556666555556666666666666666666555555566666666666666666555543 45566666666666
No 338
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=98.53 E-value=8.5e-08 Score=95.75 Aligned_cols=76 Identities=18% Similarity=0.089 Sum_probs=67.0
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceeccccc-ccccccCcccccCCCc
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPI-KGVFSNSSAISLDGNV 76 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~-~~~~~~~~~~~~~~n~ 76 (484)
|++|+|++..|..|+++++|+.|+|++|+|++..|..+.++++|+.|+|++|+|++.++. ...+++|+.+++++|.
T Consensus 82 L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 158 (452)
T 3zyi_A 82 LMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNP 158 (452)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCC
T ss_pred CcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECCCCC
Confidence 678999988888999999999999999999987778899999999999999999987775 3668899999999983
No 339
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=98.52 E-value=1.5e-07 Score=87.00 Aligned_cols=80 Identities=19% Similarity=0.234 Sum_probs=68.3
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccc-cccccCcccccCCCcccc
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIK-GVFSNSSAISLDGNVNLC 79 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n~~l~ 79 (484)
|++|++++..|..++.+++|+.|+|++|++++..|..+.++++|+.|+|++|+|++.++.. ..+++++.+++++| .+.
T Consensus 92 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n-~l~ 170 (270)
T 2o6q_A 92 VTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNN-QLK 170 (270)
T ss_dssp CCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS-CCS
T ss_pred CCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCC-cCc
Confidence 5789999655567899999999999999999777777899999999999999999877753 67899999999999 454
Q ss_pred CC
Q 011508 80 GG 81 (484)
Q Consensus 80 g~ 81 (484)
+.
T Consensus 171 ~~ 172 (270)
T 2o6q_A 171 RV 172 (270)
T ss_dssp CC
T ss_pred Ee
Confidence 43
No 340
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=98.52 E-value=6e-08 Score=99.37 Aligned_cols=76 Identities=21% Similarity=0.251 Sum_probs=66.6
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecc--cccccccccCcccccCCCc
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGE--VPIKGVFSNSSAISLDGNV 76 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~--~p~~~~~~~~~~~~~~~n~ 76 (484)
|++|++++..|..|+++++|++|||++|++++..|..++++++|+.|+|++|++++. ++....+++++.+++++|.
T Consensus 57 Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~ 134 (549)
T 2z81_A 57 LKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVE 134 (549)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESS
T ss_pred CCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCc
Confidence 688999988888999999999999999999977667799999999999999999863 3445788899999999984
No 341
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=98.52 E-value=1.6e-07 Score=89.46 Aligned_cols=81 Identities=21% Similarity=0.158 Sum_probs=69.0
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceeccccccc-------ccccCcccccC
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIKG-------VFSNSSAISLD 73 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~-------~~~~~~~~~~~ 73 (484)
|++|++++..|..++.+++|+.|+|++|+++ .+|..+..+++|+.|+|++|+|++..+... ....+..+++.
T Consensus 223 Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~ 301 (330)
T 1xku_A 223 LSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLF 301 (330)
T ss_dssp CCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECC
T ss_pred CCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEee
Confidence 6899999877789999999999999999999 999999999999999999999998766431 23567788999
Q ss_pred CCccccCCC
Q 011508 74 GNVNLCGGI 82 (484)
Q Consensus 74 ~n~~l~g~~ 82 (484)
+|+..+...
T Consensus 302 ~N~~~~~~i 310 (330)
T 1xku_A 302 SNPVQYWEI 310 (330)
T ss_dssp SSSSCGGGS
T ss_pred cCccccccc
Confidence 997655433
No 342
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=98.52 E-value=2.2e-08 Score=94.84 Aligned_cols=79 Identities=19% Similarity=0.244 Sum_probs=55.4
Q ss_pred CCCCcc-cccCchhhh-------CCCCCCEEeCcCCccccccCccc--cCCCCCCeeeccccceeccccccccc-----c
Q 011508 1 MNGNFF-QGNIPSSLS-------SLRGIENLDLSQNNLSGRIPKYL--ENFPFLQNLNLSFNHFEGEVPIKGVF-----S 65 (484)
Q Consensus 1 l~~n~l-~g~~p~~~~-------~l~~l~~l~ls~N~l~g~~p~~~--~~l~~L~~l~ls~N~l~g~~p~~~~~-----~ 65 (484)
|++|++ .+.+|..++ ++++|+.|+|++|+++|.+|..+ ..+++|+.|+|++|++++.++....+ +
T Consensus 70 L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~~~~~ 149 (312)
T 1wwl_A 70 LKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQWLKP 149 (312)
T ss_dssp CCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSSSSHHHHHHTTCCT
T ss_pred cccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcchhHHHHHHHHhhcC
Confidence 456777 456777666 77788888888888887777765 77788888888888887773333334 6
Q ss_pred cCcccccCCCccccC
Q 011508 66 NSSAISLDGNVNLCG 80 (484)
Q Consensus 66 ~~~~~~~~~n~~l~g 80 (484)
+++.+++++| .+.+
T Consensus 150 ~L~~L~L~~N-~l~~ 163 (312)
T 1wwl_A 150 GLKVLSIAQA-HSLN 163 (312)
T ss_dssp TCCEEEEESC-SCCC
T ss_pred CCcEEEeeCC-CCcc
Confidence 7777777777 4443
No 343
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=98.51 E-value=1e-07 Score=102.85 Aligned_cols=73 Identities=18% Similarity=0.203 Sum_probs=38.1
Q ss_pred CCcccccC-chhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceeccccc---ccccccCcccccCCC
Q 011508 3 GNFFQGNI-PSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPI---KGVFSNSSAISLDGN 75 (484)
Q Consensus 3 ~n~l~g~~-p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~---~~~~~~~~~~~~~~n 75 (484)
+|++.+.| |..|++|++|++|+|++|++++..|..++++++|+.|+|++|++++.+|. ...+++|+.+++++|
T Consensus 57 ~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N 133 (844)
T 3j0a_A 57 SQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKN 133 (844)
T ss_dssp TTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESC
T ss_pred CCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCC
Confidence 34333344 34455555555555555555555555555555555555555555554332 234455555555555
No 344
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=98.51 E-value=1.3e-07 Score=87.57 Aligned_cols=70 Identities=33% Similarity=0.272 Sum_probs=52.8
Q ss_pred CCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceeccccc-ccccccCcccccCCC
Q 011508 3 GNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPI-KGVFSNSSAISLDGN 75 (484)
Q Consensus 3 ~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~-~~~~~~~~~~~~~~n 75 (484)
+++++ .+|..+. ++|+.|+|++|++++..|..+.++++|+.|+|++|++++..+. ...+++++.+++++|
T Consensus 16 ~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n 86 (276)
T 2z62_A 16 ELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGN 86 (276)
T ss_dssp TSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTC
T ss_pred CCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCC
Confidence 44555 6777554 5788888888888865555788888888888888888877663 366778888888888
No 345
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=98.51 E-value=1.6e-07 Score=94.53 Aligned_cols=79 Identities=20% Similarity=0.188 Sum_probs=67.1
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccc-cccccCcccccCCCcccc
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIK-GVFSNSSAISLDGNVNLC 79 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n~~l~ 79 (484)
|++|+|++..|..|+++++|+.|+|++|++++..|..+.++++|+.|+|++|++++.++.. ..+++|+.+++++| .+.
T Consensus 39 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n-~i~ 117 (477)
T 2id5_A 39 LGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISEN-KIV 117 (477)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTS-CCC
T ss_pred CCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCC-ccc
Confidence 6789999777888999999999999999999877889999999999999999998777653 67888999999988 444
Q ss_pred C
Q 011508 80 G 80 (484)
Q Consensus 80 g 80 (484)
+
T Consensus 118 ~ 118 (477)
T 2id5_A 118 I 118 (477)
T ss_dssp E
T ss_pred c
Confidence 3
No 346
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=98.51 E-value=1.8e-07 Score=97.04 Aligned_cols=75 Identities=13% Similarity=-0.000 Sum_probs=56.7
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccc-cccccCcccccCCC
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIK-GVFSNSSAISLDGN 75 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n 75 (484)
|++|+|++..|..|+++++|++|+|++|++++..|..|.++++|+.|+|++|++++..|.. ..+++++.+++++|
T Consensus 40 Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 115 (606)
T 3t6q_A 40 FSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQT 115 (606)
T ss_dssp CTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECTTS
T ss_pred ccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeecccc
Confidence 5678887666777888888888888888888777777888888888888888887776643 55667777777776
No 347
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=98.49 E-value=1.2e-07 Score=90.59 Aligned_cols=75 Identities=20% Similarity=0.261 Sum_probs=61.7
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceeccccc-ccccccCcccccCCCcccc
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPI-KGVFSNSSAISLDGNVNLC 79 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~-~~~~~~~~~~~~~~n~~l~ 79 (484)
|++|+++ .+|..+. ++|+.|+|++|++++..|..+.++++|+.|+|++|++++.+|. ...+++++.+++++| .+.
T Consensus 179 l~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N-~l~ 254 (332)
T 2ft3_A 179 ISEAKLT-GIPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNN-KLS 254 (332)
T ss_dssp CCSSBCS-SCCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSS-CCC
T ss_pred CcCCCCC-ccCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCC-cCe
Confidence 5788888 5887665 7899999999999977778889999999999999999987774 467788899999988 444
No 348
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=98.47 E-value=1.3e-08 Score=89.44 Aligned_cols=77 Identities=25% Similarity=0.314 Sum_probs=64.9
Q ss_pred CCCCcccccCch------hhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccccccccCcccccCC
Q 011508 1 MNGNFFQGNIPS------SLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIKGVFSNSSAISLDG 74 (484)
Q Consensus 1 l~~n~l~g~~p~------~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~ 74 (484)
|+.|+|+|.+|. .++.+++|+.|+|++|++++ +| .+.++++|+.|+|++|+++..++....+++++.+++++
T Consensus 25 l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~~l~~~~~~~~~L~~L~L~~ 102 (198)
T 1ds9_A 25 AEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIKKIENLDAVADTLEELWISY 102 (198)
T ss_dssp CSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEECSCSSHHHHHHHCSEEEEEE
T ss_pred hheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcccccchhhcCCcCCEEECcC
Confidence 467888888887 99999999999999999995 88 89999999999999999995444345568899999999
Q ss_pred CccccC
Q 011508 75 NVNLCG 80 (484)
Q Consensus 75 n~~l~g 80 (484)
| .+.+
T Consensus 103 N-~l~~ 107 (198)
T 1ds9_A 103 N-QIAS 107 (198)
T ss_dssp E-ECCC
T ss_pred C-cCCc
Confidence 8 4443
No 349
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=98.47 E-value=1.1e-07 Score=91.51 Aligned_cols=75 Identities=20% Similarity=0.201 Sum_probs=53.0
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceeccccc-ccccccCcccccCCC
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPI-KGVFSNSSAISLDGN 75 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~-~~~~~~~~~~~~~~n 75 (484)
|++|++++..+..++++++|+.|+|++|++++..|..+.++++|+.|+|++|++++.++. ...+++++.+++++|
T Consensus 59 l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 134 (353)
T 2z80_A 59 LSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGN 134 (353)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTC
T ss_pred CCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCC
Confidence 466777744444677777777777777777766666677777777777777777765554 355677777777777
No 350
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=98.47 E-value=1.4e-07 Score=96.91 Aligned_cols=73 Identities=19% Similarity=0.174 Sum_probs=45.9
Q ss_pred CCCCcccccCchh-hhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccccccccCcccccCCC
Q 011508 1 MNGNFFQGNIPSS-LSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIKGVFSNSSAISLDGN 75 (484)
Q Consensus 1 l~~n~l~g~~p~~-~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n 75 (484)
|++|++++.+|.. +..+++|+.|+|++|+++|.+|..+. ++|+.|+|++|+|+..++....+++++.+++++|
T Consensus 410 l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N 483 (562)
T 3a79_B 410 VSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIMSIPKDVTHLQALQELNVASN 483 (562)
T ss_dssp CTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCCCCCTTTTSSCCCSEEECCSS
T ss_pred CCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCcccChhhcCCCCCCEEECCCC
Confidence 4677777656654 66667777777777777666665543 4666666666666644444445566666666666
No 351
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=98.46 E-value=1.2e-07 Score=91.34 Aligned_cols=77 Identities=23% Similarity=0.222 Sum_probs=66.6
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCcc-ccCCCCCCeeeccccceecccc--cccccccCcccccCCCcc
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKY-LENFPFLQNLNLSFNHFEGEVP--IKGVFSNSSAISLDGNVN 77 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~-~~~l~~L~~l~ls~N~l~g~~p--~~~~~~~~~~~~~~~n~~ 77 (484)
|++|++++..|..++++++|++|+|++|+++ .+|.. +.++++|+.|+|++|++++.++ ....+++++.+++++|..
T Consensus 83 L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~ 161 (353)
T 2z80_A 83 LTSNGINTIEEDSFSSLGSLEHLDLSYNYLS-NLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDT 161 (353)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECCSSCCS-SCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSS
T ss_pred CCCCccCccCHhhcCCCCCCCEEECCCCcCC-cCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCcc
Confidence 6789999877889999999999999999999 56655 8999999999999999997665 346789999999999843
Q ss_pred c
Q 011508 78 L 78 (484)
Q Consensus 78 l 78 (484)
+
T Consensus 162 ~ 162 (353)
T 2z80_A 162 F 162 (353)
T ss_dssp C
T ss_pred c
Confidence 3
No 352
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=98.45 E-value=6.6e-08 Score=91.45 Aligned_cols=75 Identities=21% Similarity=0.258 Sum_probs=65.8
Q ss_pred CCCCcccccCchhh--hCCCCCCEEeCcCCccccccCccccCC-----CCCCeeeccccceeccccc-ccccccCccccc
Q 011508 1 MNGNFFQGNIPSSL--SSLRGIENLDLSQNNLSGRIPKYLENF-----PFLQNLNLSFNHFEGEVPI-KGVFSNSSAISL 72 (484)
Q Consensus 1 l~~n~l~g~~p~~~--~~l~~l~~l~ls~N~l~g~~p~~~~~l-----~~L~~l~ls~N~l~g~~p~-~~~~~~~~~~~~ 72 (484)
|++|+++|.+|..+ +.+++|+.|+|++|++++. |..++.+ ++|+.|+|++|++++.+|. ...+++++.+++
T Consensus 102 L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 180 (312)
T 1wwl_A 102 LENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDL 180 (312)
T ss_dssp EEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEEC
T ss_pred ccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEEC
Confidence 46899999999987 8999999999999999966 8888877 8999999999999988864 477889999999
Q ss_pred CCCc
Q 011508 73 DGNV 76 (484)
Q Consensus 73 ~~n~ 76 (484)
++|.
T Consensus 181 s~N~ 184 (312)
T 1wwl_A 181 SDNP 184 (312)
T ss_dssp CSCT
T ss_pred CCCC
Confidence 9993
No 353
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=98.45 E-value=4.5e-07 Score=93.24 Aligned_cols=75 Identities=16% Similarity=0.036 Sum_probs=50.4
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceeccccc-ccccccCcccccCCC
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPI-KGVFSNSSAISLDGN 75 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~-~~~~~~~~~~~~~~n 75 (484)
|++|++++..|..|+++++|+.|||++|++++..|..+.++++|+.|+|++|++++.+|. ...+.+++.+++++|
T Consensus 35 Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 110 (570)
T 2z63_A 35 LSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVET 110 (570)
T ss_dssp CCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTS
T ss_pred ccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccccccc
Confidence 466777765566677777777777777777755556677777777777777777666553 245566666666666
No 354
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.44 E-value=1.2e-06 Score=80.92 Aligned_cols=136 Identities=16% Similarity=0.088 Sum_probs=92.4
Q ss_pred ccccccce-eEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCC-CCCceeEeeeeeeeccCCCceeeEEee
Q 011508 166 LIGAGSFG-SVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIR-HRNLVKIITSCVSVDFQGNDFEALVYE 243 (484)
Q Consensus 166 ~lg~G~~g-~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~~~~~~~~~~~~~~~~~~lv~e 243 (484)
.+..|..+ .||+.. ....+..+++|+-.. +....+.+|...|+.+. +--+.++++++.. ++..++|||
T Consensus 31 ~~~~G~S~~~v~rl~--~~~~~~~~~lk~~~~---~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~-----~~~~~lvme 100 (272)
T 4gkh_A 31 RDNVGQSGATIYRLY--GKPNAPELFLKHGKG---SVANDVTDEMVRLNWLTAFMPLPTIKHFIRT-----PDDAWLLTT 100 (272)
T ss_dssp EEECSSSSCEEEEEE--CCTTCCCEEEEEEET---HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEE-----TTEEEEEEE
T ss_pred EccCCCcCCeEEEEE--ecCCCeEEEEEECCC---CCHhHHHHHHHHHHHhccCCCcCeEEEEEEE-----CCeEEEEEE
Confidence 34555555 689876 333456788887653 23456788999998883 2235566766532 346799999
Q ss_pred cccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC------------------------------------
Q 011508 244 LMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYC------------------------------------ 287 (484)
Q Consensus 244 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~------------------------------------ 287 (484)
+++|.++.+..... ......+..+++..|+.||...
T Consensus 101 ~l~G~~~~~~~~~~--------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (272)
T 4gkh_A 101 AIPGKTAFQVLEEY--------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERN 172 (272)
T ss_dssp CCCSEEHHHHHHHC--------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGT
T ss_pred eeCCccccccccCC--------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhcccccc
Confidence 99998887765421 1223345666777777777421
Q ss_pred -------------------CCCeeecCCCCCCeeecCCCceEEcccCcccc
Q 011508 288 -------------------ETPIVHCDLKPSNVLLDGELTAHVSDFGLAKF 319 (484)
Q Consensus 288 -------------------~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~ 319 (484)
...++|+|+.+.||++++++.+-|+||+.+..
T Consensus 173 ~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 173 GWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp TCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred chHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 11379999999999999887778999998764
No 355
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=98.43 E-value=2.4e-07 Score=95.85 Aligned_cols=79 Identities=24% Similarity=0.225 Sum_probs=68.7
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCcc-ccCCCCCCeeeccccceeccccc-ccccccCcccccCCCccc
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKY-LENFPFLQNLNLSFNHFEGEVPI-KGVFSNSSAISLDGNVNL 78 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~-~~~l~~L~~l~ls~N~l~g~~p~-~~~~~~~~~~~~~~n~~l 78 (484)
|++|+|++..|..|+++++|++|+|++|.|+ .+|.. ++++++|+.|+|++|+|++.+|. ...+++++.+++++| .+
T Consensus 106 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N-~l 183 (597)
T 3oja_B 106 MGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSN-RL 183 (597)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTS-CC
T ss_pred CCCCcCCCCCHHHHcCCCCCCEEEeeCCCCC-CCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCC-CC
Confidence 6889999877888999999999999999999 56655 68999999999999999998885 477899999999999 55
Q ss_pred cCC
Q 011508 79 CGG 81 (484)
Q Consensus 79 ~g~ 81 (484)
.+.
T Consensus 184 ~~~ 186 (597)
T 3oja_B 184 THV 186 (597)
T ss_dssp SBC
T ss_pred CCc
Confidence 543
No 356
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=98.43 E-value=1.4e-07 Score=92.28 Aligned_cols=76 Identities=20% Similarity=0.192 Sum_probs=56.6
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccccccccCcccccCCCcccc
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIKGVFSNSSAISLDGNVNLC 79 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~l~ 79 (484)
|++|++++. +.++++++|+.|+|++|.+++..|..+.++++|+.|+|++|++++.++....+++++.+++++| .+.
T Consensus 233 l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~L~~n-~l~ 308 (390)
T 3o6n_A 233 LQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLYGQPIPTLKVLDLSHN-HLL 308 (390)
T ss_dssp CCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCEEECSSSCCTTCCEEECCSS-CCC
T ss_pred CCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcccCcccCCCCCCCEEECCCC-cce
Confidence 467777742 4677888888888888888877777788888888888888888776555556777888888877 444
No 357
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=98.42 E-value=3.1e-07 Score=89.75 Aligned_cols=62 Identities=21% Similarity=0.197 Sum_probs=28.6
Q ss_pred hhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccc-cccccCcccccCCC
Q 011508 14 LSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIK-GVFSNSSAISLDGN 75 (484)
Q Consensus 14 ~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n 75 (484)
+.++++|+.|+|++|++++..|..+.++++|+.|+|++|++++.+|.. ..+++++.+++++|
T Consensus 65 ~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 127 (390)
T 3o6n_A 65 LDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERN 127 (390)
T ss_dssp HHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred hcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCC
Confidence 344444444444444444333334444444444444444444444432 33444444444444
No 358
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=98.42 E-value=2.3e-07 Score=92.26 Aligned_cols=76 Identities=22% Similarity=0.118 Sum_probs=64.6
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceeccccc-ccccccCcccccCCCc
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPI-KGVFSNSSAISLDGNV 76 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~-~~~~~~~~~~~~~~n~ 76 (484)
|++|+|++..|..|+++++|+.|+|++|+|++..|..+.++++|+.|+|++|+|++.++. ...+++|+.+++++|.
T Consensus 71 L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 147 (440)
T 3zyj_A 71 LHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNP 147 (440)
T ss_dssp CCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCC
T ss_pred ccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCc
Confidence 578899877778899999999999999999976668889999999999999999877764 4678889999999883
No 359
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.41 E-value=9e-08 Score=87.34 Aligned_cols=67 Identities=28% Similarity=0.378 Sum_probs=55.6
Q ss_pred hhCCCCCCEEeCcCCcccc--ccCccccCCCCCCeeeccccceecccccccccc--cCcccccCCCccccCCC
Q 011508 14 LSSLRGIENLDLSQNNLSG--RIPKYLENFPFLQNLNLSFNHFEGEVPIKGVFS--NSSAISLDGNVNLCGGI 82 (484)
Q Consensus 14 ~~~l~~l~~l~ls~N~l~g--~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~--~~~~~~~~~n~~l~g~~ 82 (484)
..++++|+.|+||+|+|++ .+|..+..+++|+.|+|++|+|++. .....+. +|+.|++++|| +|+..
T Consensus 166 ~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~-~~l~~l~~l~L~~L~L~~Np-l~~~~ 236 (267)
T 3rw6_A 166 EENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE-RELDKIKGLKLEELWLDGNS-LCDTF 236 (267)
T ss_dssp HHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG-GGGGGGTTSCCSEEECTTST-TGGGC
T ss_pred HhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc-hhhhhcccCCcceEEccCCc-Ccccc
Confidence 3679999999999999998 7778888999999999999999986 3333444 89999999995 67643
No 360
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.41 E-value=1.4e-06 Score=81.08 Aligned_cols=76 Identities=16% Similarity=0.032 Sum_probs=57.7
Q ss_pred ccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCC---CceeEeeeeeeeccCCCceee
Q 011508 163 LENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHR---NLVKIITSCVSVDFQGNDFEA 239 (484)
Q Consensus 163 ~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~~~~~~~~~~~~~~~~~~ 239 (484)
..+.|+.|.++.||+++.. +++.+++|+...........+..|++.|+.+.+. .+.+++++. ..+
T Consensus 19 ~~~~l~gG~~n~vy~v~~~---dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~---------~~~ 86 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELA---DGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD---------DRT 86 (288)
T ss_dssp EEEEEEEETTEEEEEEEET---TSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE---------TTE
T ss_pred ceeeeCCcchhheEEEEeC---CCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec---------CcE
Confidence 3567999999999999754 4677999986543333346789999999999765 467777652 358
Q ss_pred EEeecccCCCH
Q 011508 240 LVYELMVNGSL 250 (484)
Q Consensus 240 lv~e~~~~gsL 250 (484)
+||||++++++
T Consensus 87 lvme~l~g~~~ 97 (288)
T 3d1u_A 87 LAMEWVDERPP 97 (288)
T ss_dssp EEEECCCCCCC
T ss_pred EEEEecccCCC
Confidence 99999998864
No 361
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=98.41 E-value=2.4e-07 Score=94.19 Aligned_cols=76 Identities=18% Similarity=0.183 Sum_probs=55.9
Q ss_pred CCCCcccccCchh-hhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccccccccCcccccCCCcccc
Q 011508 1 MNGNFFQGNIPSS-LSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIKGVFSNSSAISLDGNVNLC 79 (484)
Q Consensus 1 l~~n~l~g~~p~~-~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~l~ 79 (484)
|++|++++.+|.. +..+++|+.|+|++|+++|.+|..+. ++|+.|+|++|+|+..++....+++++.+++++| .+.
T Consensus 381 Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~L~~N-~l~ 457 (520)
T 2z7x_B 381 ISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIKSIPKQVVKLEALQELNVASN-QLK 457 (520)
T ss_dssp CCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSS-CCC
T ss_pred CCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCcccccchhhhcCCCCCEEECCCC-cCC
Confidence 5788888767765 77788888888888888877777654 6788888888888744444456777777888777 444
No 362
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=98.40 E-value=1.7e-07 Score=88.79 Aligned_cols=76 Identities=25% Similarity=0.176 Sum_probs=62.9
Q ss_pred CCCCcccccCchhhh-CCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccccccccCcccccCCCcccc
Q 011508 1 MNGNFFQGNIPSSLS-SLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIKGVFSNSSAISLDGNVNLC 79 (484)
Q Consensus 1 l~~n~l~g~~p~~~~-~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~l~ 79 (484)
|++|++++..|..+. .+++|+.|+|++|+++ .+|. ...+++|+.|+|++|++++.++....+++++.+++++| .+.
T Consensus 151 Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~-~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~L~~N-~l~ 227 (317)
T 3o53_A 151 LKLNEIDTVNFAELAASSDTLEHLNLQYNFIY-DVKG-QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNN-KLV 227 (317)
T ss_dssp CTTSCCCEEEGGGGGGGTTTCCEEECTTSCCC-EEEC-CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTS-CCC
T ss_pred CCCCCCCcccHHHHhhccCcCCEEECCCCcCc-cccc-ccccccCCEEECCCCcCCcchhhhcccCcccEEECcCC-ccc
Confidence 678999987777774 7899999999999999 4554 44589999999999999988887777889999999998 454
No 363
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=98.36 E-value=6.5e-07 Score=94.19 Aligned_cols=73 Identities=21% Similarity=0.116 Sum_probs=33.8
Q ss_pred CCCcccccCchhhhCCCCCCEEeCcCCccccccCc-cccCCCCCCeeeccccceeccccc-ccccccCcccccCCC
Q 011508 2 NGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPK-YLENFPFLQNLNLSFNHFEGEVPI-KGVFSNSSAISLDGN 75 (484)
Q Consensus 2 ~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~-~~~~l~~L~~l~ls~N~l~g~~p~-~~~~~~~~~~~~~~n 75 (484)
++|++++..|..++++++|++|+|++|+++ .+|. .++++++|+.|+|++|++++.+|. ...+.+++.+++++|
T Consensus 57 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n 131 (680)
T 1ziw_A 57 GFNTISKLEPELCQKLPMLKVLNLQHNELS-QLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHN 131 (680)
T ss_dssp CSSCCCCCCTTHHHHCTTCCEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSS
T ss_pred CCCccCccCHHHHhcccCcCEEECCCCccC-ccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCC
Confidence 344444444444444444444444444444 2332 344455555555555555444432 234444555555554
No 364
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.36 E-value=1.8e-06 Score=81.26 Aligned_cols=137 Identities=16% Similarity=0.119 Sum_probs=91.4
Q ss_pred cCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCC---CceeEeeeeeeeccCCCceeeE
Q 011508 164 ENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHR---NLVKIITSCVSVDFQGNDFEAL 240 (484)
Q Consensus 164 ~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~~~~~~~~~~~~~~~~~~l 240 (484)
.+.++.|....||+. +..+++|+-. .......+.+|.++|+.+.+. .+.+++.++. ...+..++
T Consensus 24 v~~l~~G~~n~v~~v-------g~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~----~~~g~~~~ 90 (306)
T 3tdw_A 24 VESLGEGFRNYAILV-------NGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGK----RSDGNPFV 90 (306)
T ss_dssp EEEEEECSSEEEEEE-------TTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEE----CTTSCEEE
T ss_pred eeecCCCcceeEEEE-------CCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecc----cCCCceEE
Confidence 356788888999987 1347788742 222346788999999999653 2445555432 22345689
Q ss_pred EeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC---------------------------------
Q 011508 241 VYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYC--------------------------------- 287 (484)
Q Consensus 241 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~--------------------------------- 287 (484)
|||+++|.++.+... ..++..+...++.++++.|+.||...
T Consensus 91 v~e~i~G~~l~~~~~------~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l 164 (306)
T 3tdw_A 91 GYRKVQGQILGEDGM------AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLL 164 (306)
T ss_dssp EEECCCSEECHHHHH------TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGS
T ss_pred EEeccCCeECchhhh------hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhccccc
Confidence 999999988866321 11344555555666666666655421
Q ss_pred ------------------------CCCeeecCCCCCCeeecC---CCc-eEEcccCcccc
Q 011508 288 ------------------------ETPIVHCDLKPSNVLLDG---ELT-AHVSDFGLAKF 319 (484)
Q Consensus 288 ------------------------~~~ivH~dlk~~NIll~~---~~~-~kl~Dfg~a~~ 319 (484)
...++|+|+++.||++++ ++. ..|+||+.+..
T Consensus 165 ~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 165 DESLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp CHHHHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred chhhHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 335699999999999987 355 48999998764
No 365
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=98.35 E-value=3.1e-07 Score=96.67 Aligned_cols=66 Identities=26% Similarity=0.271 Sum_probs=29.3
Q ss_pred hhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccc-c-ccccCcccccCCCcccc
Q 011508 14 LSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIK-G-VFSNSSAISLDGNVNLC 79 (484)
Q Consensus 14 ~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~-~~~~~~~~~~~~n~~l~ 79 (484)
|+++++|+.|||++|+|++..|..+.++++|+.|+|++|+|++.+|.. . .+++++.+++++||..|
T Consensus 556 ~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c 623 (680)
T 1ziw_A 556 FKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDC 623 (680)
T ss_dssp TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCB
T ss_pred cccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCccc
Confidence 444444444444444444222222344444444444444444444332 1 34445555555554444
No 366
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=98.35 E-value=3.3e-07 Score=86.79 Aligned_cols=73 Identities=21% Similarity=0.152 Sum_probs=33.7
Q ss_pred CCCcccccCchhhhCCCCCCEEeCcCCccccccCcccc-CCCCCCeeeccccceecccccccccccCcccccCCC
Q 011508 2 NGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLE-NFPFLQNLNLSFNHFEGEVPIKGVFSNSSAISLDGN 75 (484)
Q Consensus 2 ~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~-~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n 75 (484)
++|++++..|..++.+++|+.|+|++|++++..|..+. .+++|+.|+|++|++++.. ....+++++.+++++|
T Consensus 128 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~~l~~L~~L~Ls~N 201 (317)
T 3o53_A 128 ANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVK-GQVVFAKLKTLDLSSN 201 (317)
T ss_dssp CSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEE-CCCCCTTCCEEECCSS
T ss_pred CCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCcccc-cccccccCCEEECCCC
Confidence 44444443344444555555555555555544444332 4455555555555554432 2223444555555554
No 367
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=98.34 E-value=1.6e-07 Score=88.69 Aligned_cols=76 Identities=14% Similarity=0.096 Sum_probs=62.2
Q ss_pred CCCCcccccCchhh--hCCCCCCEEeCcCCccccccC----ccccCCCCCCeeeccccceecccccc-cccccCcccccC
Q 011508 1 MNGNFFQGNIPSSL--SSLRGIENLDLSQNNLSGRIP----KYLENFPFLQNLNLSFNHFEGEVPIK-GVFSNSSAISLD 73 (484)
Q Consensus 1 l~~n~l~g~~p~~~--~~l~~l~~l~ls~N~l~g~~p----~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~ 73 (484)
|++|++++.+|..+ +.+++|+.|+|++|++++.+| ..+..+++|+.|+|++|++++.+|.. ..+++++.++++
T Consensus 98 l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls 177 (310)
T 4glp_A 98 LEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLS 177 (310)
T ss_dssp EESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECC
T ss_pred eeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECC
Confidence 46788888888888 889999999999999987666 44567889999999999998877653 577888899999
Q ss_pred CCc
Q 011508 74 GNV 76 (484)
Q Consensus 74 ~n~ 76 (484)
+|.
T Consensus 178 ~N~ 180 (310)
T 4glp_A 178 DNP 180 (310)
T ss_dssp SCT
T ss_pred CCC
Confidence 883
No 368
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=98.33 E-value=6.4e-07 Score=82.33 Aligned_cols=68 Identities=22% Similarity=0.357 Sum_probs=36.3
Q ss_pred CCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccccccccCcccccCCC
Q 011508 2 NGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIKGVFSNSSAISLDGN 75 (484)
Q Consensus 2 ~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n 75 (484)
++|+|+ .+| .++.+++|+.|+|++|+|++ +|. +.++++|+.|+|++|++++..+.. . .+++.+++++|
T Consensus 49 ~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~-~~~-l~~l~~L~~L~L~~N~l~~l~~~~-~-~~L~~L~L~~N 116 (263)
T 1xeu_A 49 DNSNIQ-SLA-GMQFFTNLKELHLSHNQISD-LSP-LKDLTKLEELSVNRNRLKNLNGIP-S-ACLSRLFLDNN 116 (263)
T ss_dssp TTSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCSSCCEEECCSSCCSCCTTCC-C-SSCCEEECCSS
T ss_pred cCCCcc-cch-HHhhCCCCCEEECCCCccCC-Chh-hccCCCCCEEECCCCccCCcCccc-c-CcccEEEccCC
Confidence 455555 455 45555666666666666653 333 555566666666666655533221 1 55555555555
No 369
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=98.33 E-value=4.1e-07 Score=83.68 Aligned_cols=69 Identities=25% Similarity=0.308 Sum_probs=45.9
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccccccccCcccccCCC
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIKGVFSNSSAISLDGN 75 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n 75 (484)
|++|+|+ .+|.... ++|+.|+|++|++++ +| .+.++++|+.|+|++|++++. |....+++++.+++++|
T Consensus 92 L~~N~l~-~l~~~~~--~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~-~~l~~l~~L~~L~L~~N 160 (263)
T 1xeu_A 92 VNRNRLK-NLNGIPS--ACLSRLFLDNNELRD-TD-SLIHLKNLEILSIRNNKLKSI-VMLGFLSKLEVLDLHGN 160 (263)
T ss_dssp CCSSCCS-CCTTCCC--SSCCEEECCSSCCSB-SG-GGTTCTTCCEEECTTSCCCBC-GGGGGCTTCCEEECTTS
T ss_pred CCCCccC-CcCcccc--CcccEEEccCCccCC-Ch-hhcCcccccEEECCCCcCCCC-hHHccCCCCCEEECCCC
Confidence 4677776 4554333 777777777777774 44 467777777777777777764 34456677777777777
No 370
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=98.33 E-value=1.2e-08 Score=89.78 Aligned_cols=74 Identities=20% Similarity=0.283 Sum_probs=65.2
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccccccccCcccccCCCcccc
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIKGVFSNSSAISLDGNVNLC 79 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~l~ 79 (484)
|++|+|++ +| .++.+++|+.|+|++|+++ .+|..+..+++|+.|+|++|++++ +|....+++++.+++++| .+.
T Consensus 55 ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~~~~~l~~L~~L~l~~N-~i~ 128 (198)
T 1ds9_A 55 LSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LSGIEKLVNLRVLYMSNN-KIT 128 (198)
T ss_dssp CSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HHHHHHHHHSSEEEESEE-ECC
T ss_pred CCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CCccccCCCCCEEECCCC-cCC
Confidence 57899985 88 8999999999999999999 899988888999999999999998 455677889999999998 444
No 371
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=98.32 E-value=2e-07 Score=84.38 Aligned_cols=79 Identities=10% Similarity=0.039 Sum_probs=60.1
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCc-cccccCccccCCCCCCeeeccc-cceecccccc-cccccCcccccCCCcc
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNN-LSGRIPKYLENFPFLQNLNLSF-NHFEGEVPIK-GVFSNSSAISLDGNVN 77 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~-l~g~~p~~~~~l~~L~~l~ls~-N~l~g~~p~~-~~~~~~~~~~~~~n~~ 77 (484)
|++|+|++..|..++++++|+.|+|++|+ +++..|..+.++++|+.|+|++ |+|++..+.. ..+++++.+++++| .
T Consensus 38 l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n-~ 116 (239)
T 2xwt_C 38 LIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNT-G 116 (239)
T ss_dssp EESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEE-C
T ss_pred EeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCC-C
Confidence 46788885555578888999999999986 7744444788888999999988 8888776643 56778888888888 4
Q ss_pred ccC
Q 011508 78 LCG 80 (484)
Q Consensus 78 l~g 80 (484)
+.+
T Consensus 117 l~~ 119 (239)
T 2xwt_C 117 LKM 119 (239)
T ss_dssp CCS
T ss_pred Ccc
Confidence 444
No 372
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=98.32 E-value=4.5e-07 Score=87.00 Aligned_cols=76 Identities=24% Similarity=0.308 Sum_probs=58.0
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccc-cccccCcccccCCCcccc
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIK-GVFSNSSAISLDGNVNLC 79 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n~~l~ 79 (484)
|++|++++ + +.+..+++|+.|+|++|++++ +| .+..+++|+.|+|++|++++..|.. ..+++++.+++++|+ +.
T Consensus 250 l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~-l~ 324 (347)
T 4fmz_A 250 IGTNQISD-I-NAVKDLTKLKMLNVGSNQISD-IS-VLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNH-IT 324 (347)
T ss_dssp CCSSCCCC-C-GGGTTCTTCCEEECCSSCCCC-CG-GGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSS-CC
T ss_pred CCCCccCC-C-hhHhcCCCcCEEEccCCccCC-Ch-hhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCc-cc
Confidence 56788874 4 458888888888888888884 54 5778888888888888888777653 567888888888884 54
Q ss_pred CC
Q 011508 80 GG 81 (484)
Q Consensus 80 g~ 81 (484)
+.
T Consensus 325 ~~ 326 (347)
T 4fmz_A 325 DI 326 (347)
T ss_dssp CC
T ss_pred cc
Confidence 43
No 373
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=98.31 E-value=2.4e-07 Score=83.85 Aligned_cols=79 Identities=15% Similarity=0.219 Sum_probs=64.1
Q ss_pred CCCCc-ccccCchhhhCCCCCCEEeCcC-CccccccCccccCCCCCCeeeccccceecccccccccccCc---ccccCCC
Q 011508 1 MNGNF-FQGNIPSSLSSLRGIENLDLSQ-NNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIKGVFSNSS---AISLDGN 75 (484)
Q Consensus 1 l~~n~-l~g~~p~~~~~l~~l~~l~ls~-N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~---~~~~~~n 75 (484)
|++|+ +++..|..|+++++|+.|+|++ |+|++..|..+.++++|+.|+|++|++++ +|....+.+++ .+++++|
T Consensus 62 l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~~~~l~~L~~L~~L~l~~N 140 (239)
T 2xwt_C 62 VSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPDLTKVYSTDIFFILEITDN 140 (239)
T ss_dssp EECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCCCTTCCBCCSEEEEEEESC
T ss_pred CCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccccccccccccccEEECCCC
Confidence 46786 8744455899999999999999 99995555678999999999999999998 55566777777 9999998
Q ss_pred ccccC
Q 011508 76 VNLCG 80 (484)
Q Consensus 76 ~~l~g 80 (484)
+.+.+
T Consensus 141 ~~l~~ 145 (239)
T 2xwt_C 141 PYMTS 145 (239)
T ss_dssp TTCCE
T ss_pred cchhh
Confidence 55543
No 374
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=98.28 E-value=7.3e-07 Score=91.89 Aligned_cols=74 Identities=24% Similarity=0.333 Sum_probs=60.4
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccccccccCcccccCCCccccC
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIKGVFSNSSAISLDGNVNLCG 80 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~l~g 80 (484)
|++|+|++ +| .++.|++|+.|+|++|+|++ + ..+..|++|+.|+|++|+|++.+| ...+++|+.|++++| .+.+
T Consensus 116 Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N-~i~~ 189 (605)
T 1m9s_A 116 LEHNGISD-IN-GLVHLPQLESLYLGNNKITD-I-TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKN-HISD 189 (605)
T ss_dssp CTTSCCCC-CG-GGGGCTTCSEEECCSSCCCC-C-GGGGSCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSS-CCCB
T ss_pred ecCCCCCC-Cc-cccCCCccCEEECCCCccCC-c-hhhcccCCCCEEECcCCcCCCchh-hccCCCCCEEECcCC-CCCC
Confidence 57888884 44 58889999999999999985 4 578889999999999999988877 667888888999888 5554
No 375
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=98.26 E-value=1.1e-06 Score=82.19 Aligned_cols=74 Identities=22% Similarity=0.263 Sum_probs=53.9
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccccccccCcccccCCCccccC
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIKGVFSNSSAISLDGNVNLCG 80 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~l~g 80 (484)
+++|+++ .+|. ++.+++|+.|+|++|++++ +|. +.++++|+.|+|++|++++ +|....+++++.+++++| .+.+
T Consensus 53 l~~~~i~-~~~~-~~~l~~L~~L~L~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~-~~~l~~l~~L~~L~L~~n-~i~~ 126 (291)
T 1h6t_A 53 ANNSDIK-SVQG-IQYLPNVTKLFLNGNKLTD-IKP-LANLKNLGWLFLDENKVKD-LSSLKDLKKLKSLSLEHN-GISD 126 (291)
T ss_dssp CTTSCCC-CCTT-GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-GGGGTTCTTCCEEECTTS-CCCC
T ss_pred ccCCCcc-cChh-HhcCCCCCEEEccCCccCC-Ccc-cccCCCCCEEECCCCcCCC-ChhhccCCCCCEEECCCC-cCCC
Confidence 4677776 5554 7888888888888888884 444 7788888888888888876 444566777888888887 4443
No 376
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=98.25 E-value=1.3e-06 Score=89.88 Aligned_cols=70 Identities=23% Similarity=0.319 Sum_probs=36.0
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccccccccCcccccCCC
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIKGVFSNSSAISLDGN 75 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n 75 (484)
|++|+|++ +|+ +++|++|+.|+|++|+|++ +| .+..|++|+.|+|++|+|++. |....+++|+.|++++|
T Consensus 72 Ls~N~l~~-~~~-l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l-~~l~~l~~L~~L~Ls~N 141 (605)
T 1m9s_A 72 LNGNKLTD-IKP-LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISDI-NGLVHLPQLESLYLGNN 141 (605)
T ss_dssp CTTSCCCC-CGG-GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCCC-GGGGGCTTCSEEECCSS
T ss_pred eeCCCCCC-Chh-hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCCC-ccccCCCccCEEECCCC
Confidence 34555553 222 5555555555555555552 33 455555555555555555542 33344555555555555
No 377
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=98.25 E-value=1.2e-06 Score=82.45 Aligned_cols=74 Identities=19% Similarity=0.319 Sum_probs=51.3
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccccccccCcccccCCCccccC
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIKGVFSNSSAISLDGNVNLCG 80 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~l~g 80 (484)
|++|++++ +|. ++.+++|+.|+|++|++++ +|. +..+++|+.|+|++|++++..+ ...+++++.+++++| .+.+
T Consensus 114 l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n-~l~~ 187 (308)
T 1h6u_A 114 LTSTQITD-VTP-LAGLSNLQVLYLDLNQITN-ISP-LAGLTNLQYLSIGNAQVSDLTP-LANLSKLTTLKADDN-KISD 187 (308)
T ss_dssp CTTSCCCC-CGG-GTTCTTCCEEECCSSCCCC-CGG-GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSS-CCCC
T ss_pred CCCCCCCC-chh-hcCCCCCCEEECCCCccCc-Ccc-ccCCCCccEEEccCCcCCCChh-hcCCCCCCEEECCCC-ccCc
Confidence 56777773 554 7777888888888887774 443 7777777777777777776554 556677777777777 4443
No 378
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=98.23 E-value=1.5e-06 Score=81.90 Aligned_cols=74 Identities=18% Similarity=0.274 Sum_probs=57.8
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccccccccCcccccCCCccccC
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIKGVFSNSSAISLDGNVNLCG 80 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~l~g 80 (484)
|++|+++ .+| .+..+++|+.|+|++|+++ .+|. +.++++|+.|+|++|++++. |....+.+++.+++++| .+.+
T Consensus 48 l~~~~i~-~l~-~~~~l~~L~~L~L~~n~i~-~~~~-~~~l~~L~~L~L~~n~l~~~-~~~~~l~~L~~L~l~~n-~l~~ 121 (308)
T 1h6u_A 48 AFGTGVT-TIE-GVQYLNNLIGLELKDNQIT-DLAP-LKNLTKITELELSGNPLKNV-SAIAGLQSIKTLDLTST-QITD 121 (308)
T ss_dssp CTTSCCC-CCT-TGGGCTTCCEEECCSSCCC-CCGG-GTTCCSCCEEECCSCCCSCC-GGGTTCTTCCEEECTTS-CCCC
T ss_pred eeCCCcc-Cch-hhhccCCCCEEEccCCcCC-CChh-HccCCCCCEEEccCCcCCCc-hhhcCCCCCCEEECCCC-CCCC
Confidence 4677787 566 5888888888888888888 4555 88888888888888888864 55667788888888888 4444
No 379
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.22 E-value=4.7e-06 Score=80.29 Aligned_cols=147 Identities=13% Similarity=0.085 Sum_probs=87.1
Q ss_pred CccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCC--ceeEeeeeeeeccCCCceee
Q 011508 162 SLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRN--LVKIITSCVSVDFQGNDFEA 239 (484)
Q Consensus 162 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~~~~~~~~~~~~~~~~~ 239 (484)
...+.++.|....+|+.... +..+++|+.... ..+..|..++..+.... +.+++.++.. .....+
T Consensus 44 ~~i~~l~gG~~n~~y~v~~~----g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~----~~g~~~ 110 (362)
T 3ovc_A 44 SDLMQLSEGEESRAFSFDVG----GRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEF----SESLTY 110 (362)
T ss_dssp EEEEEEEECSSEEEEEEEET----TEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEES----SSSCEE
T ss_pred ceEEECCCCCcceEEEEEEC----CcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccC----CCCCeE
Confidence 34567899999999998742 567888876422 35888999998886433 3455554321 124678
Q ss_pred EEeecccCCCHHHH------------------HhhcCCCC----------C---CCCHHHH-------------------
Q 011508 240 LVYELMVNGSLEEW------------------LHLNRDAP----------R---NLNLLQR------------------- 269 (484)
Q Consensus 240 lv~e~~~~gsL~~~------------------l~~~~~~~----------~---~l~~~~~------------------- 269 (484)
+||||++|.++.+. |+...... . .-+|...
T Consensus 111 lv~e~l~G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~ 190 (362)
T 3ovc_A 111 CISRRAQGVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDT 190 (362)
T ss_dssp EEEECCCSEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTT
T ss_pred EEEEecCCCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999987655311 11110000 0 0011111
Q ss_pred --HHHHHHHHHHHHHHHhcC-CCCeeecCCCCCCeeecCCCceEEcccCcccccc
Q 011508 270 --LSIAVDVASTLEYLHHYC-ETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFLP 321 (484)
Q Consensus 270 --~~i~~~i~~~l~~LH~~~-~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~~ 321 (484)
......+...++++.... ...++|+|+.+.||+++++..+.|+||+.+...+
T Consensus 191 ~~~~~~~~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~gd 245 (362)
T 3ovc_A 191 VSASVAQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFGD 245 (362)
T ss_dssp THHHHHHHHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEEC
T ss_pred ccccchHHHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccCC
Confidence 011111222222332111 2568999999999999887788899999887653
No 380
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.21 E-value=8.4e-07 Score=80.91 Aligned_cols=68 Identities=19% Similarity=0.227 Sum_probs=55.0
Q ss_pred CCCCcccc--cCchhhhCCCCCCEEeCcCCccccccCccccCCC--CCCeeeccccceecccccc--------cccccCc
Q 011508 1 MNGNFFQG--NIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFP--FLQNLNLSFNHFEGEVPIK--------GVFSNSS 68 (484)
Q Consensus 1 l~~n~l~g--~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~--~L~~l~ls~N~l~g~~p~~--------~~~~~~~ 68 (484)
|++|+|++ .+|..++.+++|+.|+|++|+|++. ..+..++ +|+.|+|++|.+++..|.. ..+++|.
T Consensus 177 Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~ 254 (267)
T 3rw6_A 177 LSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLL 254 (267)
T ss_dssp CTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCC
T ss_pred CCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccC
Confidence 78999998 7778899999999999999999964 4455555 9999999999999977631 3455565
Q ss_pred cc
Q 011508 69 AI 70 (484)
Q Consensus 69 ~~ 70 (484)
.|
T Consensus 255 ~L 256 (267)
T 3rw6_A 255 RL 256 (267)
T ss_dssp EE
T ss_pred eE
Confidence 54
No 381
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=98.20 E-value=1.6e-06 Score=81.03 Aligned_cols=75 Identities=24% Similarity=0.392 Sum_probs=58.7
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccccccccCcccccCCCccccC
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIKGVFSNSSAISLDGNVNLCG 80 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~l~g 80 (484)
|++|++++ +|. ++.+++|+.|+|++|++++ + +.+..+++|+.|+|++|++++. +....+++++.+++++| .+.+
T Consensus 97 l~~n~l~~-~~~-l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~~N-~l~~ 170 (291)
T 1h6t_A 97 LDENKVKD-LSS-LKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDN-QISD 170 (291)
T ss_dssp CCSSCCCC-GGG-GTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSS-CCCC
T ss_pred CCCCcCCC-Chh-hccCCCCCEEECCCCcCCC-C-hhhcCCCCCCEEEccCCcCCcc-hhhccCCCCCEEEccCC-cccc
Confidence 57888874 554 8888999999999999884 4 4678888899999998888876 55677888888888888 5554
Q ss_pred C
Q 011508 81 G 81 (484)
Q Consensus 81 ~ 81 (484)
.
T Consensus 171 ~ 171 (291)
T 1h6t_A 171 I 171 (291)
T ss_dssp C
T ss_pred c
Confidence 3
No 382
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=98.14 E-value=1e-06 Score=89.90 Aligned_cols=67 Identities=21% Similarity=0.250 Sum_probs=45.1
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccccccccC-------cccccC
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIKGVFSNS-------SAISLD 73 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~-------~~~~~~ 73 (484)
|++|+|++ +|. .+++|+.|+|++|+|++ +|. +. ++|+.|+|++|+|+..++ .. .++ ..++++
T Consensus 147 Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~~lp~-~~--~~L~~~~~~L~~L~Ls 215 (571)
T 3cvr_A 147 ADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLESLPA-VP--VRNHHSEETEIFFRCR 215 (571)
T ss_dssp CCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCSSCCC-CC----------CCEEEECC
T ss_pred CCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCCchhh-HH--HhhhcccccceEEecC
Confidence 56777774 676 56788888888888885 777 55 788888888888874333 32 255 777777
Q ss_pred CCcccc
Q 011508 74 GNVNLC 79 (484)
Q Consensus 74 ~n~~l~ 79 (484)
+| .+.
T Consensus 216 ~N-~l~ 220 (571)
T 3cvr_A 216 EN-RIT 220 (571)
T ss_dssp SS-CCC
T ss_pred CC-cce
Confidence 77 444
No 383
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=98.13 E-value=2.8e-06 Score=86.68 Aligned_cols=49 Identities=27% Similarity=0.358 Sum_probs=24.2
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceec
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEG 56 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g 56 (484)
|++|+|++ ||..+. ++|+.|+|++|+|+ .|| ..+++|+.|+|++|+|++
T Consensus 66 Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~ 114 (571)
T 3cvr_A 66 LNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST 114 (571)
T ss_dssp CCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC
T ss_pred eCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC
Confidence 34555553 555442 44555555555555 454 234455555555555554
No 384
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=98.11 E-value=3e-06 Score=84.44 Aligned_cols=53 Identities=26% Similarity=0.350 Sum_probs=27.7
Q ss_pred CCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccccccccCcccccCCC
Q 011508 18 RGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIKGVFSNSSAISLDGN 75 (484)
Q Consensus 18 ~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n 75 (484)
++|+.|+|++|++++ +| +++++++|+.|++++|++++ +|.. ..+++.+++++|
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~--~~~L~~L~L~~n 183 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDL--PPSLEFIAAGNN 183 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCC--CTTCCEEECCSS
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCC--cccccEEECcCC
Confidence 355555555555553 55 35555555555555555554 2221 234555555555
No 385
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=98.09 E-value=3.2e-06 Score=84.56 Aligned_cols=76 Identities=22% Similarity=0.242 Sum_probs=56.4
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccccccccCcccccCCCccccC
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIKGVFSNSSAISLDGNVNLCG 80 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~l~g 80 (484)
|++|++++. |+ ++.+++|+.|+|++|++++..| +..+++|+.|++++|++++. +....+++++.+++++| .+.+
T Consensus 294 L~~n~l~~~-~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~l~~n-~l~~ 367 (466)
T 1o6v_A 294 LNENQLEDI-SP-ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV-SSLANLTNINWLSAGHN-QISD 367 (466)
T ss_dssp CCSSCCSCC-GG-GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC-GGGTTCTTCCEEECCSS-CCCB
T ss_pred cCCCcccCc-hh-hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc-hhhccCCCCCEEeCCCC-ccCc
Confidence 567888854 43 7888888888888888886555 67788888888888888875 45566778888888887 4554
Q ss_pred CC
Q 011508 81 GI 82 (484)
Q Consensus 81 ~~ 82 (484)
..
T Consensus 368 ~~ 369 (466)
T 1o6v_A 368 LT 369 (466)
T ss_dssp CG
T ss_pred cc
Confidence 43
No 386
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=98.08 E-value=1.9e-07 Score=93.07 Aligned_cols=75 Identities=8% Similarity=0.035 Sum_probs=43.9
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCC-------------CeeeccccceecccccccccccC
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFL-------------QNLNLSFNHFEGEVPIKGVFSNS 67 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L-------------~~l~ls~N~l~g~~p~~~~~~~~ 67 (484)
+++|+| |.||.++++|++|++|+|++|.++|.+|.+++++.+| +.|++++|.|++.++ ..+++
T Consensus 18 l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~lp~---~~~~L 93 (454)
T 1jl5_A 18 RHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSLPE---LPPHL 93 (454)
T ss_dssp -----------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSCCCS---CCTTC
T ss_pred cccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccccCCC---CcCCC
Confidence 468899 7999999999999999999999999999999887754 777777777776433 13456
Q ss_pred cccccCCCccccC
Q 011508 68 SAISLDGNVNLCG 80 (484)
Q Consensus 68 ~~~~~~~n~~l~g 80 (484)
+.+++++| .+.+
T Consensus 94 ~~L~l~~n-~l~~ 105 (454)
T 1jl5_A 94 ESLVASCN-SLTE 105 (454)
T ss_dssp SEEECCSS-CCSS
T ss_pred CEEEccCC-cCCc
Confidence 66666666 4444
No 387
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=98.07 E-value=4.3e-06 Score=83.32 Aligned_cols=72 Identities=17% Similarity=0.221 Sum_probs=54.2
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccccccccCcccccCCCccccC
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIKGVFSNSSAISLDGNVNLCG 80 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~l~g 80 (484)
|++|+|++ +| +++.+++|++|+|++|+|++ +| ++.+++|+.|+|++|+|++. | .+.+++++.+++++| .+.+
T Consensus 49 Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~~-~-~~~l~~L~~L~L~~N-~l~~ 120 (457)
T 3bz5_A 49 CHNSSITD-MT-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTNL-D-VTPLTKLTYLNCDTN-KLTK 120 (457)
T ss_dssp CCSSCCCC-CT-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCC-C-CTTCTTCCEEECCSS-CCSC
T ss_pred ccCCCccc-Ch-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCcee-e-cCCCCcCCEEECCCC-cCCe
Confidence 56788884 56 68888888888888888885 55 77888888888888888875 3 556777888888877 4544
No 388
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=98.07 E-value=3.7e-06 Score=84.18 Aligned_cols=75 Identities=23% Similarity=0.361 Sum_probs=64.3
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccccccccCcccccCCCccccC
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIKGVFSNSSAISLDGNVNLCG 80 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~l~g 80 (484)
|++|++++ +|. ++.+++|+.|+|++|++++. |. +..+++|+.|+|++|++++..| ...+++++.+++++| .+.+
T Consensus 272 l~~n~l~~-~~~-~~~l~~L~~L~L~~n~l~~~-~~-~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~l~~n-~l~~ 345 (466)
T 1o6v_A 272 LGANQISN-ISP-LAGLTALTNLELNENQLEDI-SP-ISNLKNLTYLTLYFNNISDISP-VSSLTKLQRLFFYNN-KVSD 345 (466)
T ss_dssp CCSSCCCC-CGG-GTTCTTCSEEECCSSCCSCC-GG-GGGCTTCSEEECCSSCCSCCGG-GGGCTTCCEEECCSS-CCCC
T ss_pred CCCCccCc-ccc-ccCCCccCeEEcCCCcccCc-hh-hcCCCCCCEEECcCCcCCCchh-hccCccCCEeECCCC-ccCC
Confidence 57899995 554 99999999999999999964 43 8899999999999999999887 568899999999999 5555
Q ss_pred C
Q 011508 81 G 81 (484)
Q Consensus 81 ~ 81 (484)
.
T Consensus 346 ~ 346 (466)
T 1o6v_A 346 V 346 (466)
T ss_dssp C
T ss_pred c
Confidence 4
No 389
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=98.06 E-value=6.9e-07 Score=85.26 Aligned_cols=79 Identities=19% Similarity=0.187 Sum_probs=64.7
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccc-cCccccCCCCCCeeeccccceecccccc-cccccCcccccCCCccc
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGR-IPKYLENFPFLQNLNLSFNHFEGEVPIK-GVFSNSSAISLDGNVNL 78 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~-~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n~~l 78 (484)
|++|.+++.+|. +.++++|+.|+|++|.+++. +|..+.++++|+.|+|++|++++..|.. ..+++++.+++++|..+
T Consensus 77 l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l 155 (336)
T 2ast_B 77 CPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGF 155 (336)
T ss_dssp CTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSC
T ss_pred cCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCC
Confidence 577888866555 67899999999999999876 8888899999999999999988766643 56888999999998655
Q ss_pred cC
Q 011508 79 CG 80 (484)
Q Consensus 79 ~g 80 (484)
.+
T Consensus 156 ~~ 157 (336)
T 2ast_B 156 SE 157 (336)
T ss_dssp CH
T ss_pred CH
Confidence 54
No 390
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.06 E-value=8.3e-06 Score=78.46 Aligned_cols=85 Identities=5% Similarity=-0.087 Sum_probs=51.9
Q ss_pred Ccc-ccccceeEEEEEEc---CCC-CeeEEEEEEeeccC---ccchHHHHHHHHHHHcCC-C--CCceeEeeeeeeeccC
Q 011508 165 NLI-GAGSFGSVYKGIFD---HDD-HETLVAVKVLNLQH---RGASKSFIAECQALRSIR-H--RNLVKIITSCVSVDFQ 233 (484)
Q Consensus 165 ~~l-g~G~~g~Vy~~~~~---~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~-h--~niv~~~~~~~~~~~~ 233 (484)
+.| +.|....+|+.... +.. ++..+++|+..... ......+.+|..+++.+. + -.+.+++.++....
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~-- 103 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGD-- 103 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSST--
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCC--
Confidence 567 88989999988643 100 14678888765322 101245778888888773 2 34666776643211
Q ss_pred CCceeeEEeecccCCCHH
Q 011508 234 GNDFEALVYELMVNGSLE 251 (484)
Q Consensus 234 ~~~~~~lv~e~~~~gsL~ 251 (484)
.....++||||++|.++.
T Consensus 104 ~~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 104 VLGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp TTSSCEEEEECCCCBCCC
T ss_pred ccCCceEEEEecCCCChh
Confidence 113457999999886654
No 391
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=98.05 E-value=1.6e-06 Score=83.79 Aligned_cols=79 Identities=27% Similarity=0.221 Sum_probs=66.3
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccC----ccccCCC-CCCeeeccccceecccccc-ccc-----ccCcc
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIP----KYLENFP-FLQNLNLSFNHFEGEVPIK-GVF-----SNSSA 69 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p----~~~~~l~-~L~~l~ls~N~l~g~~p~~-~~~-----~~~~~ 69 (484)
|+.|+++|.+|..+...++|+.|||++|++++.-+ ..+.+++ +|+.|+|++|++++..+.. ..+ .+++.
T Consensus 5 ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~ 84 (362)
T 3goz_A 5 LTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTS 84 (362)
T ss_dssp CCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCE
T ss_pred cccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccE
Confidence 68899999999998988899999999999996555 6788898 9999999999999876643 232 78999
Q ss_pred cccCCCccccC
Q 011508 70 ISLDGNVNLCG 80 (484)
Q Consensus 70 ~~~~~n~~l~g 80 (484)
+++++| .+.+
T Consensus 85 L~Ls~n-~l~~ 94 (362)
T 3goz_A 85 LNLSGN-FLSY 94 (362)
T ss_dssp EECCSS-CGGG
T ss_pred EECcCC-cCCh
Confidence 999999 4544
No 392
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=98.04 E-value=1.1e-06 Score=85.79 Aligned_cols=79 Identities=20% Similarity=0.192 Sum_probs=63.4
Q ss_pred CCCCccc--c---cCchhhhCCCCCCEEeCcCCccc----cccCccccCCCCCCeeeccccceecc----cccc---ccc
Q 011508 1 MNGNFFQ--G---NIPSSLSSLRGIENLDLSQNNLS----GRIPKYLENFPFLQNLNLSFNHFEGE----VPIK---GVF 64 (484)
Q Consensus 1 l~~n~l~--g---~~p~~~~~l~~l~~l~ls~N~l~----g~~p~~~~~l~~L~~l~ls~N~l~g~----~p~~---~~~ 64 (484)
|++|+|+ | .+|..+..+++|+.|+|++|.++ +.+|..+..+++|+.|+|++|++++. +|.. +.+
T Consensus 194 L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~ 273 (386)
T 2ca6_A 194 MVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLEN 273 (386)
T ss_dssp CCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSS
T ss_pred CcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccC
Confidence 5788887 3 45558899999999999999996 68899999999999999999999876 3332 337
Q ss_pred ccCcccccCCCccccC
Q 011508 65 SNSSAISLDGNVNLCG 80 (484)
Q Consensus 65 ~~~~~~~~~~n~~l~g 80 (484)
++++.+++++| .+.+
T Consensus 274 ~~L~~L~L~~n-~i~~ 288 (386)
T 2ca6_A 274 IGLQTLRLQYN-EIEL 288 (386)
T ss_dssp CCCCEEECCSS-CCBH
T ss_pred CCeEEEECcCC-cCCH
Confidence 88999999998 4544
No 393
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=98.02 E-value=1.5e-06 Score=82.87 Aligned_cols=75 Identities=17% Similarity=0.206 Sum_probs=55.8
Q ss_pred CCCCcccccCchhhhCC--CCCCEEeCcCCccccccCccccCCCCCCeeeccccceecc-ccc-ccccccCcccccCCCc
Q 011508 1 MNGNFFQGNIPSSLSSL--RGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGE-VPI-KGVFSNSSAISLDGNV 76 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l--~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~-~p~-~~~~~~~~~~~~~~n~ 76 (484)
|++|++. |..++.+ ++|+.|++++|.+++.+|. +..+++|+.|+|++|++++. +|. ...+++++.+++++|
T Consensus 54 l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~- 128 (336)
T 2ast_B 54 LTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGL- 128 (336)
T ss_dssp CTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTC-
T ss_pred cccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCc-
Confidence 3556665 5667777 8889999999998876554 66788899999999888765 553 366788888888888
Q ss_pred cccC
Q 011508 77 NLCG 80 (484)
Q Consensus 77 ~l~g 80 (484)
.+.+
T Consensus 129 ~l~~ 132 (336)
T 2ast_B 129 RLSD 132 (336)
T ss_dssp BCCH
T ss_pred ccCH
Confidence 4443
No 394
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=98.01 E-value=5.1e-06 Score=82.79 Aligned_cols=67 Identities=22% Similarity=0.173 Sum_probs=54.7
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccccccc----------cCccc
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIKGVFS----------NSSAI 70 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~----------~~~~~ 70 (484)
|++|+|++. .++.+++|+.|+|++|+|+| +| ++.+++|+.|+|++|+|++.++. .++ +++.+
T Consensus 198 l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~--~l~~L~~L~l~~n~L~~L 269 (457)
T 3bz5_A 198 CDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVS--TLSKLTTLHCIQTDLLEI 269 (457)
T ss_dssp CCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCT--TCTTCCEEECTTCCCSCC
T ss_pred CcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHH--HCCCCCEEeccCCCCCEE
Confidence 578999954 38999999999999999996 88 88999999999999999987653 333 44566
Q ss_pred ccCCC
Q 011508 71 SLDGN 75 (484)
Q Consensus 71 ~~~~n 75 (484)
++++|
T Consensus 270 ~l~~n 274 (457)
T 3bz5_A 270 DLTHN 274 (457)
T ss_dssp CCTTC
T ss_pred ECCCC
Confidence 66666
No 395
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=98.00 E-value=8.1e-06 Score=78.14 Aligned_cols=70 Identities=23% Similarity=0.362 Sum_probs=48.7
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccccccccCcccccCCC
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIKGVFSNSSAISLDGN 75 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n 75 (484)
+++|+++ .+|. +..+++|+.|+|++|+++ .+|. +.++++|+.|+|++|+++. +|....+++++.+++++|
T Consensus 51 l~~~~i~-~~~~-~~~~~~L~~L~l~~n~i~-~~~~-~~~l~~L~~L~L~~n~i~~-~~~~~~l~~L~~L~l~~n 120 (347)
T 4fmz_A 51 VAGEKVA-SIQG-IEYLTNLEYLNLNGNQIT-DISP-LSNLVKLTNLYIGTNKITD-ISALQNLTNLRELYLNED 120 (347)
T ss_dssp CCSSCCC-CCTT-GGGCTTCCEEECCSSCCC-CCGG-GTTCTTCCEEECCSSCCCC-CGGGTTCTTCSEEECTTS
T ss_pred EeCCccc-cchh-hhhcCCccEEEccCCccc-cchh-hhcCCcCCEEEccCCcccC-chHHcCCCcCCEEECcCC
Confidence 3566666 5554 777777777777777777 4554 7777777777777777775 355566677777777777
No 396
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=97.97 E-value=7.1e-06 Score=84.69 Aligned_cols=54 Identities=26% Similarity=0.232 Sum_probs=36.9
Q ss_pred CCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccccccccCcccccCCCcccc
Q 011508 18 RGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIKGVFSNSSAISLDGNVNLC 79 (484)
Q Consensus 18 ~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~l~ 79 (484)
++|+.|+|++|+|+ .+| ..+++|+.|+|++|+|++.++ .+.+++.+++++| .+.
T Consensus 221 ~~L~~L~Ls~N~L~-~lp---~~l~~L~~L~Ls~N~L~~lp~---~~~~L~~L~Ls~N-~L~ 274 (622)
T 3g06_A 221 SGLKELIVSGNRLT-SLP---VLPSELKELMVSGNRLTSLPM---LPSGLLSLSVYRN-QLT 274 (622)
T ss_dssp TTCCEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSCCCC---CCTTCCEEECCSS-CCC
T ss_pred CCCCEEEccCCccC-cCC---CCCCcCcEEECCCCCCCcCCc---ccccCcEEeCCCC-CCC
Confidence 66777777777777 466 345677777777777775333 4567777777777 444
No 397
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.94 E-value=4.3e-05 Score=74.63 Aligned_cols=76 Identities=16% Similarity=0.112 Sum_probs=47.2
Q ss_pred cCccccccceeEEEEEEcCCCCeeEEEEEEeeccCc-------cchHHHHHHHHHHHcCCC--CC-ceeEeeeeeeeccC
Q 011508 164 ENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHR-------GASKSFIAECQALRSIRH--RN-LVKIITSCVSVDFQ 233 (484)
Q Consensus 164 ~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~e~~~l~~l~h--~n-iv~~~~~~~~~~~~ 233 (484)
.+.||.|..+.||++.... .+..+++|....... .....+..|.++++.+.. +. +.+++.+.
T Consensus 35 ~~~lg~G~~n~vyrv~~~~--~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d------ 106 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQE--HDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD------ 106 (397)
T ss_dssp EEECCSSSSEEEEEEEC------CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE------
T ss_pred EEECCCCceEEEEEEEECC--CCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc------
Confidence 4679999999999997432 356799997643211 123456788888887732 33 33444331
Q ss_pred CCceeeEEeecccCC
Q 011508 234 GNDFEALVYELMVNG 248 (484)
Q Consensus 234 ~~~~~~lv~e~~~~g 248 (484)
....++|||++++.
T Consensus 107 -~~~~~lvmE~l~g~ 120 (397)
T 2olc_A 107 -TEMAVTVMEDLSHL 120 (397)
T ss_dssp -TTTTEEEECCCTTS
T ss_pred -CCccEEEEEeCCCc
Confidence 22457999999764
No 398
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=97.94 E-value=2.2e-06 Score=83.49 Aligned_cols=79 Identities=22% Similarity=0.299 Sum_probs=65.1
Q ss_pred CCCCccc-ccCc---hhhhCCCCCCEEeCcCCccc--c---ccCccccCCCCCCeeecccccee----ccccc-cccccc
Q 011508 1 MNGNFFQ-GNIP---SSLSSLRGIENLDLSQNNLS--G---RIPKYLENFPFLQNLNLSFNHFE----GEVPI-KGVFSN 66 (484)
Q Consensus 1 l~~n~l~-g~~p---~~~~~l~~l~~l~ls~N~l~--g---~~p~~~~~l~~L~~l~ls~N~l~----g~~p~-~~~~~~ 66 (484)
|++|+|+ +.+| ..+..+++|+.|+|++|+++ | .+|..+..+++|+.|+|++|.|+ +.+|. ...+++
T Consensus 166 L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~ 245 (386)
T 2ca6_A 166 CGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPN 245 (386)
T ss_dssp CCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTT
T ss_pred CCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCC
Confidence 6889998 6777 57889999999999999998 4 45558899999999999999996 55554 366789
Q ss_pred CcccccCCCccccC
Q 011508 67 SSAISLDGNVNLCG 80 (484)
Q Consensus 67 ~~~~~~~~n~~l~g 80 (484)
++.+++++| .+.+
T Consensus 246 L~~L~L~~n-~i~~ 258 (386)
T 2ca6_A 246 LRELGLNDC-LLSA 258 (386)
T ss_dssp CCEEECTTC-CCCH
T ss_pred cCEEECCCC-CCch
Confidence 999999999 4443
No 399
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=97.93 E-value=4.2e-06 Score=80.35 Aligned_cols=55 Identities=24% Similarity=0.273 Sum_probs=34.8
Q ss_pred CCCcccccCchhhhCCCCCCEEeCcCCccccccCc-cccCCCCCCeeeccccceeccccc
Q 011508 2 NGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPK-YLENFPFLQNLNLSFNHFEGEVPI 60 (484)
Q Consensus 2 ~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~-~~~~l~~L~~l~ls~N~l~g~~p~ 60 (484)
++|+|+ .||..+ .++|+.|+|++|+|+ .||. +|.++++|+.|+|++|++.+.+|.
T Consensus 17 ~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~ 72 (350)
T 4ay9_X 17 QESKVT-EIPSDL--PRNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEA 72 (350)
T ss_dssp ESTTCC-SCCTTC--CTTCSEEEEESCCCS-EECTTSSTTCTTCCEEEEECCTTCCEECT
T ss_pred cCCCCC-ccCcCc--CCCCCEEEccCCcCC-CcCHHHHcCCCCCCEEECcCCCCCCccCh
Confidence 355666 666655 356677777777776 4553 466677777777777776655553
No 400
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=97.87 E-value=5.4e-06 Score=79.98 Aligned_cols=79 Identities=18% Similarity=0.172 Sum_probs=64.5
Q ss_pred CCCCcccccCc----hhhhCCC-CCCEEeCcCCccccccCccccCC-----CCCCeeeccccceecccccc-----ccc-
Q 011508 1 MNGNFFQGNIP----SSLSSLR-GIENLDLSQNNLSGRIPKYLENF-----PFLQNLNLSFNHFEGEVPIK-----GVF- 64 (484)
Q Consensus 1 l~~n~l~g~~p----~~~~~l~-~l~~l~ls~N~l~g~~p~~~~~l-----~~L~~l~ls~N~l~g~~p~~-----~~~- 64 (484)
|++|+|++..+ ..+.+++ +|+.|+|++|++++..+..+..+ ++|+.|+|++|++++..+.. ..+
T Consensus 29 Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~ 108 (362)
T 3goz_A 29 LSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKTLAAIP 108 (362)
T ss_dssp CTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHHTSC
T ss_pred ccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHHHHHhCC
Confidence 68899986666 6788898 99999999999998778777775 99999999999999877652 223
Q ss_pred ccCcccccCCCccccC
Q 011508 65 SNSSAISLDGNVNLCG 80 (484)
Q Consensus 65 ~~~~~~~~~~n~~l~g 80 (484)
++++.+++++| .+.+
T Consensus 109 ~~L~~L~Ls~N-~l~~ 123 (362)
T 3goz_A 109 FTITVLDLGWN-DFSS 123 (362)
T ss_dssp TTCCEEECCSS-CGGG
T ss_pred CCccEEECcCC-cCCc
Confidence 78999999999 4443
No 401
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.86 E-value=0.00013 Score=69.50 Aligned_cols=32 Identities=25% Similarity=0.333 Sum_probs=28.6
Q ss_pred CCCeeecCCCCCCeeecCCCceEEcccCcccc
Q 011508 288 ETPIVHCDLKPSNVLLDGELTAHVSDFGLAKF 319 (484)
Q Consensus 288 ~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~ 319 (484)
...++|||+++.||+++.++.+.|+||+.+..
T Consensus 221 ~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 221 SPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp SCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred cCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 67899999999999998888999999997753
No 402
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=97.74 E-value=2.5e-05 Score=80.62 Aligned_cols=65 Identities=23% Similarity=0.283 Sum_probs=42.0
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccceecccccccccccCcccccCCC
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNHFEGEVPIKGVFSNSSAISLDGN 75 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n 75 (484)
|++|+|+ .+|..+. ++|+.|+|++|+|+ .||. .+++|+.|+|++|+|++.++ .+++|+.+++++|
T Consensus 47 ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~~lp~---~l~~L~~L~Ls~N 111 (622)
T 3g06_A 47 VGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTSLPV---LPPGLLELSIFSN 111 (622)
T ss_dssp CCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCSCCCC---CCTTCCEEEECSC
T ss_pred ecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCCcCCC---CCCCCCEEECcCC
Confidence 4667776 7776665 67777777777777 5665 45667777777777664333 4556666666666
No 403
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=97.63 E-value=2.9e-05 Score=74.45 Aligned_cols=72 Identities=19% Similarity=0.165 Sum_probs=39.2
Q ss_pred CCCCcccccCchhhhCCCCCCEEeCcCCccccccCc-cccCCCCCCeeeccccceecccccccccccCcccccCCC
Q 011508 1 MNGNFFQGNIPSSLSSLRGIENLDLSQNNLSGRIPK-YLENFPFLQNLNLSFNHFEGEVPIKGVFSNSSAISLDGN 75 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l~~l~~l~ls~N~l~g~~p~-~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n 75 (484)
|++|+|+ .||..+...++|+.|++++|+..+.||. .+.++++|+.||||+|+|+..++. .+.++..+...++
T Consensus 161 L~~N~i~-~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~--~~~~L~~L~~l~~ 233 (350)
T 4ay9_X 161 LNKNGIQ-EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSY--GLENLKKLRARST 233 (350)
T ss_dssp CCSSCCC-EECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSS--SCTTCCEEECTTC
T ss_pred ccccccc-CCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChh--hhccchHhhhccC
Confidence 4566665 5665555566666666654332225554 346666666666666666644432 2444444444444
No 404
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.51 E-value=0.00053 Score=64.18 Aligned_cols=140 Identities=16% Similarity=0.104 Sum_probs=86.4
Q ss_pred ccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCC---CCCceeEeeeeeeeccCCCceee
Q 011508 163 LENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIR---HRNLVKIITSCVSVDFQGNDFEA 239 (484)
Q Consensus 163 ~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~~~~~~~~~~~~~~~~~~ 239 (484)
-.+.|+.|....+|+... ++..+++|+.... ....+..|.+.|+.|. ...+.+++.++.. .+..+
T Consensus 40 ~~~~l~gG~~n~~y~v~~----~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~-----~g~~~ 107 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND----EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNS-----QGHSF 107 (312)
T ss_dssp EEEEECCSSSSEEEEEES----SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEEC-----SSEEE
T ss_pred eeEEeCCccceeeeEEEE----CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeec-----CCceE
Confidence 346789999999999873 2456788887532 3466888998888883 3557777776432 34679
Q ss_pred EEeecccCCCHH--------H---HHhhcCC-C-----------------CCCCCHHHHH---HHHH-------------
Q 011508 240 LVYELMVNGSLE--------E---WLHLNRD-A-----------------PRNLNLLQRL---SIAV------------- 274 (484)
Q Consensus 240 lv~e~~~~gsL~--------~---~l~~~~~-~-----------------~~~l~~~~~~---~i~~------------- 274 (484)
+||||+++..+. . .++.... . ...-+|.... ++..
T Consensus 108 lvme~l~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~ 187 (312)
T 3jr1_A 108 LLLEALNKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFG 187 (312)
T ss_dssp EEEECCCCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCS
T ss_pred EEEEeccCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChH
Confidence 999999887541 1 1222211 0 0012454322 1111
Q ss_pred ---HHHHHH-HHHHh-cCCCCeeecCCCCCCeeecCCCceEEcccC
Q 011508 275 ---DVASTL-EYLHH-YCETPIVHCDLKPSNVLLDGELTAHVSDFG 315 (484)
Q Consensus 275 ---~i~~~l-~~LH~-~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 315 (484)
.+...+ ..|.. .....++|+|+.+.|++++.++ +.|.|+.
T Consensus 188 ~~~~l~~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 188 NIDLIVQIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp CHHHHHHHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHHHHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 111111 23321 1146799999999999999887 8899984
No 405
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=97.48 E-value=1.9e-05 Score=78.68 Aligned_cols=75 Identities=19% Similarity=0.123 Sum_probs=50.5
Q ss_pred CCCCcccccCchhhhCC-----CCCCEEeCcCCccccc----cCccccCCCCCCeeeccccceecccccc-c-----ccc
Q 011508 1 MNGNFFQGNIPSSLSSL-----RGIENLDLSQNNLSGR----IPKYLENFPFLQNLNLSFNHFEGEVPIK-G-----VFS 65 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~l-----~~l~~l~ls~N~l~g~----~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~-----~~~ 65 (484)
|++|++++..+..+... ++|+.|+|++|.+++. +|..+..+++|+.|+|++|++++..+.. . ..+
T Consensus 291 Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~ 370 (461)
T 1z7x_W 291 LAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGS 370 (461)
T ss_dssp CTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTC
T ss_pred CCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCC
Confidence 46777765555555433 6788888888888764 5666777788888888888777654321 1 145
Q ss_pred cCcccccCCC
Q 011508 66 NSSAISLDGN 75 (484)
Q Consensus 66 ~~~~~~~~~n 75 (484)
+++.+++++|
T Consensus 371 ~L~~L~L~~n 380 (461)
T 1z7x_W 371 VLRVLWLADC 380 (461)
T ss_dssp CCCEEECTTS
T ss_pred ceEEEECCCC
Confidence 7777888777
No 406
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.41 E-value=0.00048 Score=63.84 Aligned_cols=77 Identities=16% Similarity=0.047 Sum_probs=53.9
Q ss_pred CCccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCC---CceeEeeeeeeeccCCCce
Q 011508 161 FSLENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHR---NLVKIITSCVSVDFQGNDF 237 (484)
Q Consensus 161 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~~~~~~~~~~~~~~~~ 237 (484)
..-...+|.|..+.||+.+.. +++.|.+|+-..........+..|...|+.|.-. -+.+++++. .
T Consensus 17 v~~v~~~g~G~~~~vyrv~l~---DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~---------~ 84 (288)
T 3f7w_A 17 VAAVAERGHSHRWHLYRVELA---DGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD---------D 84 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEET---TSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE---------T
T ss_pred eEEEEecCCCCCeEEEEEEEC---CCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc---------C
Confidence 444577999999999999876 4678999987654443445678899999888422 244444431 2
Q ss_pred eeEEeecccCCC
Q 011508 238 EALVYELMVNGS 249 (484)
Q Consensus 238 ~~lv~e~~~~gs 249 (484)
.++||||++++.
T Consensus 85 ~~lv~e~l~~~~ 96 (288)
T 3f7w_A 85 RTLAMEWVDERP 96 (288)
T ss_dssp TEEEEECCCCCC
T ss_pred ceEEEEeecccC
Confidence 378999997764
No 407
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.39 E-value=0.00073 Score=66.36 Aligned_cols=80 Identities=11% Similarity=0.111 Sum_probs=49.2
Q ss_pred CCCeeecCCCCCCeeecCCCceEEcccCcccccccccccCCCCccccccccccccccCccccCCC---CCCcccceehhh
Q 011508 288 ETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGS---EVSTSGDVYSFG 364 (484)
Q Consensus 288 ~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~---~~~~~~Dvws~G 364 (484)
...++|||+++.||++++++ ++++||+.+...+...+. .... ..-...|.+|+..... ......++....
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dl-----a~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDI-----GAYL-GNLILAFFAQDGHATQENDRKEYKQWILRTI 303 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHH-----HHHH-HHHHHHHHHGGGGCCSSCCSHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHH-----HHHH-HHHHHHHHhcccccccccchHHHHHHHHHHH
Confidence 78899999999999998876 999999988765332110 0000 0011345666544311 112234556778
Q ss_pred HHHHHHHhCC
Q 011508 365 ILLLEMFTGK 374 (484)
Q Consensus 365 vvl~elltg~ 374 (484)
..+|+.++++
T Consensus 304 ~~~~~~y~~~ 313 (420)
T 2pyw_A 304 EQTWNLFNKR 313 (420)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888877654
No 408
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=97.28 E-value=5.7e-05 Score=72.92 Aligned_cols=75 Identities=17% Similarity=0.091 Sum_probs=52.5
Q ss_pred CCCCcccccCchhhh-----CCCCCCEEeCcCCcccc----ccCccccCCCCCCeeeccccceeccc----c-ccccccc
Q 011508 1 MNGNFFQGNIPSSLS-----SLRGIENLDLSQNNLSG----RIPKYLENFPFLQNLNLSFNHFEGEV----P-IKGVFSN 66 (484)
Q Consensus 1 l~~n~l~g~~p~~~~-----~l~~l~~l~ls~N~l~g----~~p~~~~~l~~L~~l~ls~N~l~g~~----p-~~~~~~~ 66 (484)
|++|+|+..-...++ ..++|+.|+|++|.|+. .++..+..+++|+.|||++|+|+..- + ......+
T Consensus 133 Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~ 212 (372)
T 3un9_A 133 LQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQ 212 (372)
T ss_dssp CCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSC
T ss_pred cCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCC
Confidence 578888754444442 46788999999998874 35566677888999999998886422 1 1134457
Q ss_pred CcccccCCC
Q 011508 67 SSAISLDGN 75 (484)
Q Consensus 67 ~~~~~~~~n 75 (484)
++.+++++|
T Consensus 213 L~~L~Ls~N 221 (372)
T 3un9_A 213 LQELNVAYN 221 (372)
T ss_dssp CCEEECCSS
T ss_pred cCeEECCCC
Confidence 888888888
No 409
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.26 E-value=0.00075 Score=62.95 Aligned_cols=32 Identities=22% Similarity=0.283 Sum_probs=26.2
Q ss_pred CCCeeecCCCCCCeeecCCCceEEcccCccccc
Q 011508 288 ETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFL 320 (484)
Q Consensus 288 ~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~ 320 (484)
...++|+|+.+.||+ ..++.+.++||..+...
T Consensus 172 ~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~g 203 (301)
T 3dxq_A 172 PLAACHCDPLCENFL-DTGERMWIVDWEYSGMN 203 (301)
T ss_dssp CCEEECSCCCGGGEE-ECSSCEEECCCTTCEEE
T ss_pred CceeeccCCCcCCEE-ECCCCEEEEecccccCC
Confidence 345899999999999 55667899999987643
No 410
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.23 E-value=0.00036 Score=56.08 Aligned_cols=58 Identities=17% Similarity=0.182 Sum_probs=40.4
Q ss_pred CEEeCcCCccc-cccCccccCCCCCCeeeccccceecccccc-cccccCcccccCCCccccC
Q 011508 21 ENLDLSQNNLS-GRIPKYLENFPFLQNLNLSFNHFEGEVPIK-GVFSNSSAISLDGNVNLCG 80 (484)
Q Consensus 21 ~~l~ls~N~l~-g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n~~l~g 80 (484)
..+|.++|.|+ ..+|..+. ++|+.|+|++|+|+...+.. ..+.+++.+++.+||..|+
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~Cd 70 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCD 70 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCS
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeecc
Confidence 46788888876 46775532 36788888888887666543 4566777788888877664
No 411
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=97.19 E-value=0.0018 Score=56.14 Aligned_cols=100 Identities=17% Similarity=0.156 Sum_probs=65.5
Q ss_pred CCHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcccccccccccC
Q 011508 248 GSLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFLPEAANNL 327 (484)
Q Consensus 248 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 327 (484)
.||.+.|+... .++++.++|.++.|.+.+|.-+-. .+.-..+=+.|..|++..+|.+.+.+ ..+.
T Consensus 33 vSL~eIL~~~~---~PlsEEqaWALc~Qc~~~L~~~~~--~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~--------- 97 (229)
T 2yle_A 33 LSLEEILRLYN---QPINEEQAWAVCYQCCGSLRAAAR--RRQPRHRVRSAAQIRVWRDGAVTLAP-AADD--------- 97 (229)
T ss_dssp EEHHHHHHHHT---SCCCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCCSGGGEEEETTSCEEECC-C------------
T ss_pred ccHHHHHHHcC---CCcCHHHHHHHHHHHHHHHHhhhh--cccCCceecCCcceEEecCCceeccc-cccc---------
Confidence 37999998654 469999999999999999887621 11111233456889999999888764 1111
Q ss_pred CCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhC
Q 011508 328 SSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTG 373 (484)
Q Consensus 328 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg 373 (484)
.....+.|||... ...+.+.=|||+|+++|.-+-=
T Consensus 98 ----------~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDy 132 (229)
T 2yle_A 98 ----------AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDY 132 (229)
T ss_dssp -------------------CCSS-SSSCHHHHHHHHHHHHHHHHTT
T ss_pred ----------ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhc
Confidence 0123466888753 3456788999999999998873
No 412
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.08 E-value=0.0078 Score=56.46 Aligned_cols=149 Identities=13% Similarity=0.089 Sum_probs=77.4
Q ss_pred CccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCC--ceeEeeeeeeec-cCCCceeeEE
Q 011508 165 NLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRN--LVKIITSCVSVD-FQGNDFEALV 241 (484)
Q Consensus 165 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~~~~~~~~~-~~~~~~~~lv 241 (484)
+.|+.|....+|+....+ + .+++|+.... .....+..|..++..+.... +.+++....... ...++..+++
T Consensus 28 ~~i~~G~~n~~~~v~~~~---g-~~vlk~~~~~--~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l 101 (322)
T 2ppq_A 28 KGIAEGVENSNFLLHTTK---D-PLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAAL 101 (322)
T ss_dssp EEECC---EEEEEEEESS---C-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEE
T ss_pred eccCCCcccceEEEEeCC---c-cEEEEEeCCC--CCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEE
Confidence 456778889999987542 2 5788887642 12245566777777663222 233332100000 0012356899
Q ss_pred eecccCCCHH-----H---------HHhhcC-C--CCC--CC---CHHHHHH------------HHHHHHHHHHHHHhc-
Q 011508 242 YELMVNGSLE-----E---------WLHLNR-D--APR--NL---NLLQRLS------------IAVDVASTLEYLHHY- 286 (484)
Q Consensus 242 ~e~~~~gsL~-----~---------~l~~~~-~--~~~--~l---~~~~~~~------------i~~~i~~~l~~LH~~- 286 (484)
++|++|..+. . .++... . ... .. .|...+. +...+...++.++..
T Consensus 102 ~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~ 181 (322)
T 2ppq_A 102 ISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHW 181 (322)
T ss_dssp EECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHC
T ss_pred EEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhC
Confidence 9999875431 0 112111 0 000 01 1222110 011234455555432
Q ss_pred ---CCCCeeecCCCCCCeeecCCCceEEcccCcccc
Q 011508 287 ---CETPIVHCDLKPSNVLLDGELTAHVSDFGLAKF 319 (484)
Q Consensus 287 ---~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~ 319 (484)
....++|+|+.+.||+++++..+.|+||+.+..
T Consensus 182 ~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 182 PKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp CCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred cccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 135799999999999999876668999997753
No 413
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=97.08 E-value=0.00015 Score=72.18 Aligned_cols=78 Identities=14% Similarity=0.050 Sum_probs=53.3
Q ss_pred CCCCcccccCchhhhC-----CCCCCEEeCcCCccccc----cCccccCCCCCCeeeccccceeccc-----ccc-cccc
Q 011508 1 MNGNFFQGNIPSSLSS-----LRGIENLDLSQNNLSGR----IPKYLENFPFLQNLNLSFNHFEGEV-----PIK-GVFS 65 (484)
Q Consensus 1 l~~n~l~g~~p~~~~~-----l~~l~~l~ls~N~l~g~----~p~~~~~l~~L~~l~ls~N~l~g~~-----p~~-~~~~ 65 (484)
|++|+++...+..+.. +++|+.|+|++|++++. +|..+..+++|+.|+|++|++++.- +.. ..+.
T Consensus 177 L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~ 256 (461)
T 1z7x_W 177 VSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSS 256 (461)
T ss_dssp CCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTC
T ss_pred CcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCC
Confidence 4677777555555543 66888888888888853 6777777888888888888876532 111 2356
Q ss_pred cCcccccCCCcccc
Q 011508 66 NSSAISLDGNVNLC 79 (484)
Q Consensus 66 ~~~~~~~~~n~~l~ 79 (484)
+++.+++++| .+.
T Consensus 257 ~L~~L~L~~n-~l~ 269 (461)
T 1z7x_W 257 RLRTLWIWEC-GIT 269 (461)
T ss_dssp CCCEEECTTS-CCC
T ss_pred CceEEECcCC-CCC
Confidence 7888888887 443
No 414
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.96 E-value=0.00067 Score=54.48 Aligned_cols=51 Identities=24% Similarity=0.428 Sum_probs=40.8
Q ss_pred CCCccc-ccCchhhhCCCCCCEEeCcCCccccccCc-cccCCCCCCeeecccccee
Q 011508 2 NGNFFQ-GNIPSSLSSLRGIENLDLSQNNLSGRIPK-YLENFPFLQNLNLSFNHFE 55 (484)
Q Consensus 2 ~~n~l~-g~~p~~~~~l~~l~~l~ls~N~l~g~~p~-~~~~l~~L~~l~ls~N~l~ 55 (484)
++++|+ ..+|..+ ..+|+.|+|++|+|+ .||. .|..+++|+.|+|++|.+.
T Consensus 16 s~~~L~~~~vP~~l--p~~l~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 16 GRRGLTWASLPTAF--PVDTTELVLTGNNLT-ALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp CSSCCCTTTSCSCC--CTTCSEEECTTSCCS-SCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CCCCCccccCCCCC--CcCCCEEECCCCcCC-ccChhhhhhccccCEEEecCCCee
Confidence 567775 4677643 247999999999999 6765 4688999999999999885
No 415
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=96.93 E-value=0.00022 Score=68.71 Aligned_cols=76 Identities=17% Similarity=0.031 Sum_probs=54.8
Q ss_pred CCCCcccccCchhh-hCCCCCCEEeCcCCccccccCccc-----cCCCCCCeeeccccceeccc----c-cccccccCcc
Q 011508 1 MNGNFFQGNIPSSL-SSLRGIENLDLSQNNLSGRIPKYL-----ENFPFLQNLNLSFNHFEGEV----P-IKGVFSNSSA 69 (484)
Q Consensus 1 l~~n~l~g~~p~~~-~~l~~l~~l~ls~N~l~g~~p~~~-----~~l~~L~~l~ls~N~l~g~~----p-~~~~~~~~~~ 69 (484)
|++|+|+..-...+ ..+++|+.|||++|+|+..-...+ ...++|+.|+|++|.|+..- + .....++++.
T Consensus 108 Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~ 187 (372)
T 3un9_A 108 LASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTH 187 (372)
T ss_dssp CTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCE
T ss_pred ecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCE
Confidence 67888875444444 356789999999999985444444 35689999999999996522 1 1134678999
Q ss_pred cccCCCc
Q 011508 70 ISLDGNV 76 (484)
Q Consensus 70 ~~~~~n~ 76 (484)
+++++|.
T Consensus 188 L~Ls~N~ 194 (372)
T 3un9_A 188 LSLLHTG 194 (372)
T ss_dssp EECTTSS
T ss_pred EeCCCCC
Confidence 9999993
No 416
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.90 E-value=0.01 Score=56.02 Aligned_cols=33 Identities=33% Similarity=0.325 Sum_probs=28.4
Q ss_pred CCCeeecCCCCCCeeecCC----CceEEcccCccccc
Q 011508 288 ETPIVHCDLKPSNVLLDGE----LTAHVSDFGLAKFL 320 (484)
Q Consensus 288 ~~~ivH~dlk~~NIll~~~----~~~kl~Dfg~a~~~ 320 (484)
...++|||+.+.||+++.+ ..+.|+||+.+...
T Consensus 182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 5679999999999999874 67899999988754
No 417
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.84 E-value=0.003 Score=62.04 Aligned_cols=75 Identities=15% Similarity=0.160 Sum_probs=47.9
Q ss_pred cCccccccceeEEEEEEcCC-----CCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCc-eeEeeeeeeeccCCCce
Q 011508 164 ENLIGAGSFGSVYKGIFDHD-----DHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNL-VKIITSCVSVDFQGNDF 237 (484)
Q Consensus 164 ~~~lg~G~~g~Vy~~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~~~~ 237 (484)
.+.|+.|....+|++...+. ..+..+++|+.... .....+.+|..+++.+...++ .++++.+ .+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~-----~~--- 147 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIF-----SG--- 147 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEE-----TT---
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEe-----CC---
Confidence 35688898999999986431 12457888887432 122556689998888843334 4555542 21
Q ss_pred eeEEeecccCCC
Q 011508 238 EALVYELMVNGS 249 (484)
Q Consensus 238 ~~lv~e~~~~gs 249 (484)
.+|+||++|.+
T Consensus 148 -g~v~e~l~G~~ 158 (429)
T 1nw1_A 148 -GRLEEYIPSRP 158 (429)
T ss_dssp -EEEECCCCEEE
T ss_pred -CEEEEEeCCcc
Confidence 38999997633
No 418
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.81 E-value=0.0074 Score=59.61 Aligned_cols=75 Identities=15% Similarity=0.054 Sum_probs=45.2
Q ss_pred cCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCc-eeEeeeeeeeccCCCceeeEEe
Q 011508 164 ENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNL-VKIITSCVSVDFQGNDFEALVY 242 (484)
Q Consensus 164 ~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~~~~~~lv~ 242 (484)
.+.|+.|-...+|+....+ .+..+++|+...... ..-...+|..++..|...++ .++++.+ . + .+|+
T Consensus 113 i~~lsgG~tN~~y~v~~~~--~~~~~vLRi~g~~~~-~~idR~~E~~vl~~L~~~gl~P~ll~~~-----~-~---G~v~ 180 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMS--KQAKYLIRLYGPKTD-EIINREREKKISCILYNKNIAKKIYVFF-----T-N---GRIE 180 (458)
T ss_dssp EEEECC--CEEEEEEEETT--TTEEEEEEEECC-CC-SCSCHHHHHHHHHHHTTSSSBCCEEEEE-----T-T---EEEE
T ss_pred EEEcCCCeEeEEEEEEECC--CCceEEEEECCCChh-hhcCHHHHHHHHHHHHhcCCCCCEEEEe-----C-C---eEEE
Confidence 3568889999999998542 236688887643221 11122578888888865555 4555542 1 1 3599
Q ss_pred ecccCCCH
Q 011508 243 ELMVNGSL 250 (484)
Q Consensus 243 e~~~~gsL 250 (484)
||++|.+|
T Consensus 181 e~I~G~~l 188 (458)
T 2qg7_A 181 EFMDGYAL 188 (458)
T ss_dssp ECCCSEEC
T ss_pred EeeCCccC
Confidence 99987443
No 419
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.71 E-value=0.0079 Score=56.61 Aligned_cols=147 Identities=12% Similarity=0.086 Sum_probs=78.3
Q ss_pred CccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCC--ceeEeeeeeeec-cCCCceeeEE
Q 011508 165 NLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRN--LVKIITSCVSVD-FQGNDFEALV 241 (484)
Q Consensus 165 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~~~~~~~~~~-~~~~~~~~lv 241 (484)
..++ |....||+.... +++.+++|+..... .....+..|..++..+.... +.+++.. .... ...++..+++
T Consensus 32 ~~l~-g~~n~~y~v~~~---~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~-~g~~~~~~~g~~~~l 105 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDE---DRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAF-NGQTLLNHQGFYFAV 105 (328)
T ss_dssp EEEC-CSSSEEEEECCT---TCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCB-TTBSCEEETTEEEEE
T ss_pred Eeec-CcccceEEEEcC---CCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeec-CCcEEEEECCEEEEE
Confidence 3466 888899987532 34568899886332 23456677888887773222 3333332 0000 0113456789
Q ss_pred eecccCCCHH-----HH---------HhhcC---CC--CCCCCHHHH----HHH---------------HHHHHHHHHHH
Q 011508 242 YELMVNGSLE-----EW---------LHLNR---DA--PRNLNLLQR----LSI---------------AVDVASTLEYL 283 (484)
Q Consensus 242 ~e~~~~gsL~-----~~---------l~~~~---~~--~~~l~~~~~----~~i---------------~~~i~~~l~~L 283 (484)
|++++|.++. .+ ++... .. ....++... ..+ ...+...++.+
T Consensus 106 ~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l 185 (328)
T 1zyl_A 106 FPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAV 185 (328)
T ss_dssp EECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHH
T ss_pred EEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHH
Confidence 9999774321 11 11110 00 011222211 000 11111222333
Q ss_pred Hhc----CCCCeeecCCCCCCeeecCCCceEEcccCcccc
Q 011508 284 HHY----CETPIVHCDLKPSNVLLDGELTAHVSDFGLAKF 319 (484)
Q Consensus 284 H~~----~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~ 319 (484)
... ....++|||+++.||+++ + .+.|+||+.+..
T Consensus 186 ~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 186 TAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp HHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred HHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 211 145689999999999999 4 899999987764
No 420
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.62 E-value=0.012 Score=56.45 Aligned_cols=145 Identities=11% Similarity=0.138 Sum_probs=80.7
Q ss_pred CccccccceeEEEEEEcC-----CCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCC-ceeEeeeeeeeccCCCcee
Q 011508 165 NLIGAGSFGSVYKGIFDH-----DDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRN-LVKIITSCVSVDFQGNDFE 238 (484)
Q Consensus 165 ~~lg~G~~g~Vy~~~~~~-----~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~~~~~~~~~~~~~~~~~ 238 (484)
+.|..|-...+|+..... ..++..+++|+.... ........+|.++++.+.-.+ ..++++.+ .+
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~-----~~---- 125 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVF-----PE---- 125 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEE-----TT----
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEc-----CC----
Confidence 567778889999988542 112467888886332 223456678999988884222 24555542 22
Q ss_pred eEEeecccCCCHHH--------------H---HhhcC-CCCCCCC--HHHHHHHHHHHHH-------------------H
Q 011508 239 ALVYELMVNGSLEE--------------W---LHLNR-DAPRNLN--LLQRLSIAVDVAS-------------------T 279 (484)
Q Consensus 239 ~lv~e~~~~gsL~~--------------~---l~~~~-~~~~~l~--~~~~~~i~~~i~~-------------------~ 279 (484)
.+||||++|.+|.. . ++... ...+... +.++.++..++.. .
T Consensus 126 g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~ 205 (379)
T 3feg_A 126 GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDE 205 (379)
T ss_dssp EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHH
T ss_pred ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHH
Confidence 38999998754421 1 11111 1111122 3444445443322 2
Q ss_pred HHHHHh----c-CCCCeeecCCCCCCeeecCC----CceEEcccCcccc
Q 011508 280 LEYLHH----Y-CETPIVHCDLKPSNVLLDGE----LTAHVSDFGLAKF 319 (484)
Q Consensus 280 l~~LH~----~-~~~~ivH~dlk~~NIll~~~----~~~kl~Dfg~a~~ 319 (484)
+..|.. . ....++|+|+.+.||+++++ +.+.++||..+..
T Consensus 206 ~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 206 MGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 233321 1 13468999999999999876 6899999998764
No 421
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=96.58 E-value=0.00032 Score=72.13 Aligned_cols=67 Identities=12% Similarity=0.101 Sum_probs=34.2
Q ss_pred CchhhhCCCCCCEEeCcCC--ccccccCccccC-CCCCCeeeccccceec-ccccc-cccccCcccccCCCc
Q 011508 10 IPSSLSSLRGIENLDLSQN--NLSGRIPKYLEN-FPFLQNLNLSFNHFEG-EVPIK-GVFSNSSAISLDGNV 76 (484)
Q Consensus 10 ~p~~~~~l~~l~~l~ls~N--~l~g~~p~~~~~-l~~L~~l~ls~N~l~g-~~p~~-~~~~~~~~~~~~~n~ 76 (484)
++..+.++++|+.|+|+++ .+++..+..++. +++|+.|+|++|++++ .++.. ..+++++.+++++|+
T Consensus 428 ~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~ 499 (592)
T 3ogk_B 428 VRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCC 499 (592)
T ss_dssp HHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCC
T ss_pred HHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCC
Confidence 4444555666666666532 355444444432 5566666666666554 12221 334556666666653
No 422
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=96.43 E-value=0.00079 Score=57.83 Aligned_cols=75 Identities=12% Similarity=0.142 Sum_probs=53.9
Q ss_pred CCCC-cccc----cCchhhhCCCCCCEEeCcCCcccc----ccCccccCCCCCCeeeccccceecc-----ccccccccc
Q 011508 1 MNGN-FFQG----NIPSSLSSLRGIENLDLSQNNLSG----RIPKYLENFPFLQNLNLSFNHFEGE-----VPIKGVFSN 66 (484)
Q Consensus 1 l~~n-~l~g----~~p~~~~~l~~l~~l~ls~N~l~g----~~p~~~~~l~~L~~l~ls~N~l~g~-----~p~~~~~~~ 66 (484)
|++| +|.. .+...+...++|+.|+|++|+|+. .+...+...++|+.|+|++|.|... ........+
T Consensus 43 L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~ 122 (185)
T 1io0_A 43 LNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTS 122 (185)
T ss_dssp CTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSS
T ss_pred ecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCC
Confidence 4566 6653 245567778999999999999974 2455566678999999999999753 112234567
Q ss_pred Cccccc--CCC
Q 011508 67 SSAISL--DGN 75 (484)
Q Consensus 67 ~~~~~~--~~n 75 (484)
++.+++ ++|
T Consensus 123 L~~L~L~~~~N 133 (185)
T 1io0_A 123 LIELRIDNQSQ 133 (185)
T ss_dssp CCEEECCCCSS
T ss_pred ceEEEecCCCC
Confidence 889999 667
No 423
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=96.42 E-value=0.00055 Score=70.42 Aligned_cols=41 Identities=20% Similarity=0.338 Sum_probs=20.4
Q ss_pred hCCCCCCEEeCcCCccccc----cCccccCCCCCCeeecccccee
Q 011508 15 SSLRGIENLDLSQNNLSGR----IPKYLENFPFLQNLNLSFNHFE 55 (484)
Q Consensus 15 ~~l~~l~~l~ls~N~l~g~----~p~~~~~l~~L~~l~ls~N~l~ 55 (484)
.++++|+.|+|++|.+++. ++..+.++++|+.|+|++|.++
T Consensus 161 ~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~ 205 (592)
T 3ogk_B 161 THCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFA 205 (592)
T ss_dssp HHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCS
T ss_pred hhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCC
Confidence 3455555555555555443 3333344555555555555554
No 424
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=96.39 E-value=0.00096 Score=57.30 Aligned_cols=66 Identities=11% Similarity=0.191 Sum_probs=49.9
Q ss_pred CchhhhCCCCCCEEeCcCC-cccc----ccCccccCCCCCCeeeccccceecccc-----cccccccCcccccCCC
Q 011508 10 IPSSLSSLRGIENLDLSQN-NLSG----RIPKYLENFPFLQNLNLSFNHFEGEVP-----IKGVFSNSSAISLDGN 75 (484)
Q Consensus 10 ~p~~~~~l~~l~~l~ls~N-~l~g----~~p~~~~~l~~L~~l~ls~N~l~g~~p-----~~~~~~~~~~~~~~~n 75 (484)
+...+...+.|+.|+|++| .+.. .+...+...++|+.|+|++|+|...-- ......+++.+++++|
T Consensus 28 l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N 103 (185)
T 1io0_A 28 LKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESN 103 (185)
T ss_dssp HHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSS
T ss_pred HHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCC
Confidence 3445678999999999999 8874 355667778999999999999864211 1123467899999999
No 425
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=96.24 E-value=0.0006 Score=70.11 Aligned_cols=66 Identities=11% Similarity=0.118 Sum_probs=48.0
Q ss_pred CchhhhCCCCCCEEeCcCCccccccCccccC-CCCCCeeeccccceecccccc--cccccCcccccCCCc
Q 011508 10 IPSSLSSLRGIENLDLSQNNLSGRIPKYLEN-FPFLQNLNLSFNHFEGEVPIK--GVFSNSSAISLDGNV 76 (484)
Q Consensus 10 ~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~-l~~L~~l~ls~N~l~g~~p~~--~~~~~~~~~~~~~n~ 76 (484)
++.-+.++++|+.|+|++ ++++..+..++. +++|+.|+|++|.+++..+.. ..+++++.+++++|+
T Consensus 424 ~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~ 492 (594)
T 2p1m_B 424 FGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCP 492 (594)
T ss_dssp HHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCS
T ss_pred HHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCC
Confidence 333467788899999977 777666666665 888888888888886543321 347788888888884
No 426
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.18 E-value=0.006 Score=58.56 Aligned_cols=75 Identities=9% Similarity=0.165 Sum_probs=41.2
Q ss_pred CccccccceeEEEEEEcCC------CCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCc-eeEeeeeeeeccCCCce
Q 011508 165 NLIGAGSFGSVYKGIFDHD------DHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNL-VKIITSCVSVDFQGNDF 237 (484)
Q Consensus 165 ~~lg~G~~g~Vy~~~~~~~------~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~~~~~~~~~~~~~~~~ 237 (484)
..|+.|....+|+....+. ..+..+++|+...... .......|..+++.+...++ .++++.. .
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~-~~~~~~~E~~~l~~L~~~g~~P~~~~~~-----~---- 108 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD-ELYNTISEFEVYKTMSKYKIAPQLLNTF-----N---- 108 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG-GTSCHHHHHHHHHHHHHTTSSCCEEEEE-----T----
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc-ceecHHHHHHHHHHHHhcCCCCceEEec-----C----
Confidence 4678888899999875421 0125688887653221 11123578888877743333 3555431 1
Q ss_pred eeEEeecccCCC
Q 011508 238 EALVYELMVNGS 249 (484)
Q Consensus 238 ~~lv~e~~~~gs 249 (484)
-++||||++|.+
T Consensus 109 ~~~v~e~i~G~~ 120 (369)
T 3c5i_A 109 GGRIEEWLYGDP 120 (369)
T ss_dssp TEEEEECCCSEE
T ss_pred CcEEEEEecCCc
Confidence 268999998753
No 427
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.17 E-value=0.018 Score=55.48 Aligned_cols=32 Identities=22% Similarity=0.314 Sum_probs=27.4
Q ss_pred CCCeeecCCCCCCeeecCC------CceEEcccCcccc
Q 011508 288 ETPIVHCDLKPSNVLLDGE------LTAHVSDFGLAKF 319 (484)
Q Consensus 288 ~~~ivH~dlk~~NIll~~~------~~~kl~Dfg~a~~ 319 (484)
...++|+|+.+.||+++++ +.+.++||..+..
T Consensus 243 ~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 243 PVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp CEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred CeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 3468999999999999877 7899999987753
No 428
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.11 E-value=0.057 Score=50.98 Aligned_cols=33 Identities=21% Similarity=0.351 Sum_probs=28.6
Q ss_pred CCCeeecCCCCCCeeecCCCceEEcccCccccc
Q 011508 288 ETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFL 320 (484)
Q Consensus 288 ~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~ 320 (484)
...++|+|+.+.||++++++.+.|+||+.+...
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~ 237 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPMLA 237 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence 356999999999999998888999999877654
No 429
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=95.68 E-value=0.0024 Score=65.57 Aligned_cols=53 Identities=15% Similarity=0.180 Sum_probs=21.9
Q ss_pred CcccccCchhhh-CCCCCCEEeCcCC-ccccc-cCccccCCCCCCeeeccccceec
Q 011508 4 NFFQGNIPSSLS-SLRGIENLDLSQN-NLSGR-IPKYLENFPFLQNLNLSFNHFEG 56 (484)
Q Consensus 4 n~l~g~~p~~~~-~l~~l~~l~ls~N-~l~g~-~p~~~~~l~~L~~l~ls~N~l~g 56 (484)
|.+++..+..++ ++++|+.|+|++| .++.. ++..+.++++|+.|+|++|.+++
T Consensus 115 ~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~ 170 (594)
T 2p1m_B 115 MVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDD 170 (594)
T ss_dssp CBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEEC
T ss_pred cEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCC
Confidence 334433344343 3444444444444 23221 22223344444444444444443
No 430
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=95.48 E-value=0.015 Score=54.81 Aligned_cols=57 Identities=18% Similarity=0.293 Sum_probs=36.6
Q ss_pred CCCCCEEeCcCCccccccCc-cccCCCCCCeeeccccceecccccc-cccccCc-ccccCCC
Q 011508 17 LRGIENLDLSQNNLSGRIPK-YLENFPFLQNLNLSFNHFEGEVPIK-GVFSNSS-AISLDGN 75 (484)
Q Consensus 17 l~~l~~l~ls~N~l~g~~p~-~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~-~~~~~~n 75 (484)
+++|+.|+|++|+++ .||. .|.+|.+|+.|+|++| ++...+.+ ..+.+|+ .+.+.++
T Consensus 225 ~~~L~~l~L~~n~i~-~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~~ 284 (329)
T 3sb4_A 225 MPNLVSLDISKTNAT-TIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPAS 284 (329)
T ss_dssp CTTCCEEECTTBCCC-EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECTT
T ss_pred cCCCeEEECCCCCcc-eecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEccc
Confidence 677778888877777 5554 4677777777777776 54333322 4455566 6666554
No 431
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=95.05 E-value=0.0028 Score=60.61 Aligned_cols=61 Identities=11% Similarity=0.164 Sum_probs=48.4
Q ss_pred hCCCCCCEEeCcCCccccccCcccc---CCCCCCeeeccccceecc----cccc-cccccCcccccCCC
Q 011508 15 SSLRGIENLDLSQNNLSGRIPKYLE---NFPFLQNLNLSFNHFEGE----VPIK-GVFSNSSAISLDGN 75 (484)
Q Consensus 15 ~~l~~l~~l~ls~N~l~g~~p~~~~---~l~~L~~l~ls~N~l~g~----~p~~-~~~~~~~~~~~~~n 75 (484)
+.+++|+.|+|++|.+++..+..+. .+++|+.|+||.|.|.+. ++.. ..+++|+.+++++|
T Consensus 249 ~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n 317 (362)
T 2ra8_A 249 DRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYN 317 (362)
T ss_dssp TTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSB
T ss_pred CCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCC
Confidence 3589999999999999876554443 588999999999999873 2322 45788999999888
No 432
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=94.70 E-value=0.006 Score=58.31 Aligned_cols=64 Identities=16% Similarity=0.208 Sum_probs=44.1
Q ss_pred CCCCCCEEeCcC--Cccccc-----cCccc--cCCCCCCeeeccccceeccccc----ccccccCcccccCCCccccC
Q 011508 16 SLRGIENLDLSQ--NNLSGR-----IPKYL--ENFPFLQNLNLSFNHFEGEVPI----KGVFSNSSAISLDGNVNLCG 80 (484)
Q Consensus 16 ~l~~l~~l~ls~--N~l~g~-----~p~~~--~~l~~L~~l~ls~N~l~g~~p~----~~~~~~~~~~~~~~n~~l~g 80 (484)
.+++|+.|+|+. |...|. +-..+ ..+++|+.|+|++|.+....+. .+.+++|+.|+++.| .+.+
T Consensus 217 ~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n-~L~d 293 (362)
T 2ra8_A 217 DLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAG-VLTD 293 (362)
T ss_dssp BCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSS-CCBH
T ss_pred cCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCC-CCCh
Confidence 799999999964 332221 11223 3589999999999998754332 245788999999988 4443
No 433
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.60 E-value=0.11 Score=50.42 Aligned_cols=144 Identities=14% Similarity=0.161 Sum_probs=81.2
Q ss_pred CccccccceeEEEEEEcCCCC-----eeEEEEEEeeccCccchHHHHHHHHHHHcCCCCC-ceeEeeeeeeeccCCCcee
Q 011508 165 NLIGAGSFGSVYKGIFDHDDH-----ETLVAVKVLNLQHRGASKSFIAECQALRSIRHRN-LVKIITSCVSVDFQGNDFE 238 (484)
Q Consensus 165 ~~lg~G~~g~Vy~~~~~~~~~-----~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~~~~~~~~~~~~~~~~~ 238 (484)
+.+..|-...+|+........ +..+++|+..... ...-...+|..+++.+...+ ..++++.+ .-
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~---------~~ 145 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GKFYDSKVELDVFRYLSNINIAPNIIADF---------PE 145 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEE---------TT
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEc---------CC
Confidence 467778889999988653211 4678888864322 11223457888887774323 34455431 12
Q ss_pred eEEeecccCCCHHH-------H----------Hhhc-------CC--CCCCCCHHHHHHHHHHH----------------
Q 011508 239 ALVYELMVNGSLEE-------W----------LHLN-------RD--APRNLNLLQRLSIAVDV---------------- 276 (484)
Q Consensus 239 ~lv~e~~~~gsL~~-------~----------l~~~-------~~--~~~~l~~~~~~~i~~~i---------------- 276 (484)
+.|+||++|.+|.. . ++.. .. ...+.-+.++.++..++
T Consensus 146 ~~I~efI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~ 225 (424)
T 3mes_A 146 GRIEEFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELY 225 (424)
T ss_dssp EEEEECCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHH
T ss_pred CEEEEEeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccH
Confidence 78999998765311 0 1110 00 11111244444433322
Q ss_pred ---HHHHHHHHh---------------------cCCCCeeecCCCCCCeeecCCCceEEcccCcccc
Q 011508 277 ---ASTLEYLHH---------------------YCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKF 319 (484)
Q Consensus 277 ---~~~l~~LH~---------------------~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~ 319 (484)
...+.+|.. .....++|+|+.+.||+ +.++.+.++||..+..
T Consensus 226 ~~l~~e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 226 SKILEEIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp HHHHHHHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 222333321 11346899999999999 7788999999998864
No 434
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=93.30 E-value=0.14 Score=49.64 Aligned_cols=29 Identities=24% Similarity=0.447 Sum_probs=24.6
Q ss_pred eeecCCCCCCeee------cCCCceEEcccCcccc
Q 011508 291 IVHCDLKPSNVLL------DGELTAHVSDFGLAKF 319 (484)
Q Consensus 291 ivH~dlk~~NIll------~~~~~~kl~Dfg~a~~ 319 (484)
++|+|+.+.||++ +++..++++||..|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 5799999999999 3456799999998864
No 435
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=93.06 E-value=0.083 Score=49.56 Aligned_cols=71 Identities=17% Similarity=0.154 Sum_probs=56.8
Q ss_pred CCCCcccccCch-hhhCCCCCCEEeCcCCccccccC-ccccCCCCCC-eeeccccceecccccc-cccccCcccccCCC
Q 011508 1 MNGNFFQGNIPS-SLSSLRGIENLDLSQNNLSGRIP-KYLENFPFLQ-NLNLSFNHFEGEVPIK-GVFSNSSAISLDGN 75 (484)
Q Consensus 1 l~~n~l~g~~p~-~~~~l~~l~~l~ls~N~l~g~~p-~~~~~l~~L~-~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n 75 (484)
|++|+++ .||. .|.+|++|+.|+|++| ++ .|+ .+|.+|++|+ .+++++ +++...+.+ ..+.+|+.+++.+|
T Consensus 233 L~~n~i~-~I~~~aF~~~~~L~~l~l~~n-i~-~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n 307 (329)
T 3sb4_A 233 ISKTNAT-TIPDFTFAQKKYLLKIKLPHN-LK-TIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGD 307 (329)
T ss_dssp CTTBCCC-EECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSS
T ss_pred CCCCCcc-eecHhhhhCCCCCCEEECCcc-cc-eehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCC
Confidence 5678898 6664 6999999999999998 77 565 5689999999 999998 666444433 56778888888777
No 436
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=92.37 E-value=0.028 Score=47.27 Aligned_cols=73 Identities=11% Similarity=0.134 Sum_probs=48.5
Q ss_pred cCchhhhCCCCCCEEeCcCCccccccCccccCCCCCCeeeccccc-eecc-cccccc----cccCcccccCCCccccCC
Q 011508 9 NIPSSLSSLRGIENLDLSQNNLSGRIPKYLENFPFLQNLNLSFNH-FEGE-VPIKGV----FSNSSAISLDGNVNLCGG 81 (484)
Q Consensus 9 ~~p~~~~~l~~l~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~-l~g~-~p~~~~----~~~~~~~~~~~n~~l~g~ 81 (484)
.+|...-.--+|+.||||++.++..=-..+..|++|+.|+|+++. ++.. +..... .++|+.|++++.+.++..
T Consensus 52 ~LP~~~~~~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~ 130 (176)
T 3e4g_A 52 HLPTGPLDKYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDK 130 (176)
T ss_dssp GSCCCSTTCCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHH
T ss_pred cCCcccCCCceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHH
Confidence 456543333579999999999885433557889999999999985 5421 111122 236888999887666543
No 437
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=88.92 E-value=0.51 Score=45.53 Aligned_cols=60 Identities=10% Similarity=0.097 Sum_probs=35.3
Q ss_pred hhhCCCCCCEEeCcCCccccccC-ccccCCCCCCeeeccccceecccccccccccCcccccCCC
Q 011508 13 SLSSLRGIENLDLSQNNLSGRIP-KYLENFPFLQNLNLSFNHFEGEVPIKGVFSNSSAISLDGN 75 (484)
Q Consensus 13 ~~~~l~~l~~l~ls~N~l~g~~p-~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n 75 (484)
.|.+ .+|+.++|.+ +++ .|+ .+|.+|++|+.++|++|+++......-...+++.+.+.+|
T Consensus 153 aF~~-~~L~~i~lp~-~l~-~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~~~~L~~l~lp~~ 213 (401)
T 4fdw_A 153 AFFN-STVQEIVFPS-TLE-QLKEDIFYYCYNLKKADLSKTKITKLPASTFVYAGIEEVLLPVT 213 (401)
T ss_dssp TTTT-CCCCEEECCT-TCC-EECSSTTTTCTTCCEEECTTSCCSEECTTTTTTCCCSEEECCTT
T ss_pred hcCC-CCceEEEeCC-Ccc-EehHHHhhCcccCCeeecCCCcceEechhhEeecccCEEEeCCc
Confidence 3444 3577777764 555 343 5567777777777777777654444333345555555544
No 438
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=84.78 E-value=0.17 Score=31.14 Aligned_cols=28 Identities=18% Similarity=0.262 Sum_probs=12.0
Q ss_pred eEEehhhhhhHHHhhhhheeeeeecccCC
Q 011508 104 KLIIPIVTGILFLTGMSCLIITSWWSKTK 132 (484)
Q Consensus 104 ~~~i~~v~~~~~~~~~~~~~~~~~~~~~~ 132 (484)
.++.+++.|+++++.++ +++++++++++
T Consensus 12 ~IA~gVVgGv~~~~ii~-~~~~~~~RRr~ 39 (44)
T 2ks1_B 12 SIATGMVGALLLLLVVA-LGIGLFMRRRH 39 (44)
T ss_dssp SSTHHHHHHHHHHHHHH-HHHHHHHHTTT
T ss_pred eEEeehhHHHHHHHHHH-HHHHHHhhhhH
Confidence 34445555555543333 33334444433
No 439
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=84.42 E-value=1 Score=43.32 Aligned_cols=36 Identities=22% Similarity=0.349 Sum_probs=22.1
Q ss_pred CCCCEEeCcCCcccccc-CccccCCCCCCeeecccccee
Q 011508 18 RGIENLDLSQNNLSGRI-PKYLENFPFLQNLNLSFNHFE 55 (484)
Q Consensus 18 ~~l~~l~ls~N~l~g~~-p~~~~~l~~L~~l~ls~N~l~ 55 (484)
.+|+.++| .|+++ .| +.+|.+|++|+.+++++|.+.
T Consensus 248 ~~L~~i~l-p~~i~-~I~~~aF~~c~~L~~l~l~~~~~~ 284 (401)
T 4fdw_A 248 SGITTVKL-PNGVT-NIASRAFYYCPELAEVTTYGSTFN 284 (401)
T ss_dssp CCCSEEEE-ETTCC-EECTTTTTTCTTCCEEEEESSCCC
T ss_pred CCccEEEe-CCCcc-EEChhHhhCCCCCCEEEeCCcccc
Confidence 56777777 34455 34 345666777777777666654
No 440
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=81.87 E-value=0.75 Score=38.48 Aligned_cols=63 Identities=11% Similarity=0.119 Sum_probs=28.6
Q ss_pred hhCCCCCCEEeCcCCc-cccccCccccCC----CCCCeeeccccc-eec-ccccccccccCcccccCCCc
Q 011508 14 LSSLRGIENLDLSQNN-LSGRIPKYLENF----PFLQNLNLSFNH-FEG-EVPIKGVFSNSSAISLDGNV 76 (484)
Q Consensus 14 ~~~l~~l~~l~ls~N~-l~g~~p~~~~~l----~~L~~l~ls~N~-l~g-~~p~~~~~~~~~~~~~~~n~ 76 (484)
+..|++|+.|+|+++. ++..==..++.+ ++|+.|+|+++. ++. -+.....+++|+.|++++-+
T Consensus 81 L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 81 MEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNLKYLFLSDLP 150 (176)
T ss_dssp GTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTCCEEEEESCT
T ss_pred hcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCCCEEECCCCC
Confidence 4556666666666653 443211223332 246666666542 331 01111334555555555443
No 441
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=80.88 E-value=0.28 Score=30.15 Aligned_cols=26 Identities=12% Similarity=0.344 Sum_probs=10.7
Q ss_pred EEehhhhhhHHHhhhhheeeeeecccC
Q 011508 105 LIIPIVTGILFLTGMSCLIITSWWSKT 131 (484)
Q Consensus 105 ~~i~~v~~~~~~~~~~~~~~~~~~~~~ 131 (484)
++.+++.|+++++.++ ++++++++++
T Consensus 12 IA~gVVgGv~~v~ii~-~~~~~~~RRR 37 (44)
T 2l2t_A 12 IAAGVIGGLFILVIVG-LTFAVYVRRK 37 (44)
T ss_dssp HHHHHHHHHHHHHHHH-HHHHHHHHTT
T ss_pred EEEeehHHHHHHHHHH-HHHHHHhhhh
Confidence 3444444454443333 3333344443
No 442
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=79.48 E-value=3 Score=36.07 Aligned_cols=103 Identities=16% Similarity=0.192 Sum_probs=66.5
Q ss_pred CceeeEEeecccCC-CHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHH-HHHhcCCCCeeecCCCCCCeeecCCCceEEc
Q 011508 235 NDFEALVYELMVNG-SLEEWLHLNRDAPRNLNLLQRLSIAVDVASTLE-YLHHYCETPIVHCDLKPSNVLLDGELTAHVS 312 (484)
Q Consensus 235 ~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~l~-~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~ 312 (484)
++...+.++.-+++ +... ++ .++...+++++.+|+.... +++ .-+|--|.|+||+++.++.+++.
T Consensus 60 eD~~~i~y~~~~~~~~f~~-i~-------~~~~~eKlrll~nl~~L~~~~~~-----~r~tf~l~P~NL~f~~~~~p~i~ 126 (219)
T 4ano_A 60 EDEVKVVIKPPSSFLTFAA-IR-------KTTLLSRIRAAIHLVSKVKHHSA-----RRLIFIVCPENLMFNRALEPFFL 126 (219)
T ss_dssp SSEEEEEEECCTTCEEHHH-HH-------TSCHHHHHHHHHHHHHHHSSCCS-----SSEECCCCGGGEEECTTCCEEES
T ss_pred CCEEEEEEEcCcccCcHHH-HH-------hcCHHHHHHHHHHHHHHHHHhhh-----CceeEEEeCceEEEeCCCcEEEE
Confidence 34555555554333 3333 32 3788899999999887666 444 45788899999999999999998
Q ss_pred ccCcccccccccccCCCCccccccccccccccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCC
Q 011508 313 DFGLAKFLPEAANNLSSNQSSSVGVKGTVGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNE 379 (484)
Q Consensus 313 Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~ 379 (484)
-.|+-..+ +|.- .+..-=.-.+=|++..++.++..|+.
T Consensus 127 hRGi~~~l------------------------pP~e-----~~ee~fl~qyKali~all~~K~~Fe~ 164 (219)
T 4ano_A 127 HVGVKESL------------------------PPDE-----WDDERLLREVKATVLALTEGEYRFDE 164 (219)
T ss_dssp CCEETTTB------------------------SSCS-----CCHHHHHHHHHHHHHHHTTCSSCHHH
T ss_pred EcCCcccC------------------------CCCC-----CCHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 87754332 2321 11111122356788888888877754
No 443
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=77.66 E-value=3.2 Score=35.72 Aligned_cols=87 Identities=15% Similarity=0.213 Sum_probs=62.2
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCcccccccccccCCCCcccccccccccc
Q 011508 263 NLNLLQRLSIAVDVASTLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAKFLPEAANNLSSNQSSSVGVKGTVG 342 (484)
Q Consensus 263 ~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~g~~~ 342 (484)
.++...+++++.+|+....+++ .-+|--|.|+||+++.++.+++.-.|+...+
T Consensus 77 ~~~~~eKlr~l~ni~~l~~~~~-----~r~tf~L~P~NL~f~~~~~p~i~~RGik~~l---------------------- 129 (215)
T 4ann_A 77 SFTKNEKLRYLLNIKNLEEVNR-----TRYTFVLAPDELFFTRDGLPIAKTRGLQNVV---------------------- 129 (215)
T ss_dssp GSCHHHHHHHHHHGGGGGGGGG-----SSEECCCSGGGEEECTTSCEEESCCEETTTB----------------------
T ss_pred hcCHHHHHHHHHHHHHHHHHhc-----CceEEEEecceEEEcCCCCEEEEEccCccCC----------------------
Confidence 3788999999999998886555 3478889999999999999999887764432
Q ss_pred ccCccccCCCCCCcccceehhhHHHHHHHhCCCCCCCCccC
Q 011508 343 YAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKGPTNEMFTG 383 (484)
Q Consensus 343 y~aPE~~~~~~~~~~~Dvws~Gvvl~elltg~~p~~~~~~~ 383 (484)
+|. ..+...=.-.+=+++..+++++..|+....+
T Consensus 130 --~P~-----~~~ee~fL~qyKAliiall~~K~~Fe~l~~G 163 (215)
T 4ann_A 130 --DPL-----PVSEAEFLTRYKALVICAFNEKQSFDALVEG 163 (215)
T ss_dssp --SCC-----CCCHHHHHHHHHHHHHHHHCTTCCHHHHHHS
T ss_pred --CCC-----CCCHHHHHHHHHHHHHHHHcCCCCHHHHHcC
Confidence 221 1111122234568889999999988765443
No 444
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=76.35 E-value=1.2 Score=37.99 Aligned_cols=61 Identities=7% Similarity=0.107 Sum_probs=38.8
Q ss_pred hCCCCCCEEeCcCC-cccc----ccCccccCCCCCCeeeccccceeccccc--c---cccccCcccccCCC
Q 011508 15 SSLRGIENLDLSQN-NLSG----RIPKYLENFPFLQNLNLSFNHFEGEVPI--K---GVFSNSSAISLDGN 75 (484)
Q Consensus 15 ~~l~~l~~l~ls~N-~l~g----~~p~~~~~l~~L~~l~ls~N~l~g~~p~--~---~~~~~~~~~~~~~n 75 (484)
.+-+.|+.|+|++| +|.. .|-..+..-.+|+.|+|++|++...--. . ..-..++.|+++.|
T Consensus 38 ~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N 108 (197)
T 1pgv_A 38 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESN 108 (197)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSS
T ss_pred hcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCC
Confidence 45577888888885 6642 2344555667888888888888532111 1 12346777888877
No 445
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=74.51 E-value=1.2 Score=37.95 Aligned_cols=65 Identities=20% Similarity=0.244 Sum_probs=45.0
Q ss_pred chhhhCCCCCCEEeCcCCccccc----cCccccCCCCCCeeeccccceeccccc-----ccccccCcccccCCC
Q 011508 11 PSSLSSLRGIENLDLSQNNLSGR----IPKYLENFPFLQNLNLSFNHFEGEVPI-----KGVFSNSSAISLDGN 75 (484)
Q Consensus 11 p~~~~~l~~l~~l~ls~N~l~g~----~p~~~~~l~~L~~l~ls~N~l~g~~p~-----~~~~~~~~~~~~~~n 75 (484)
-..+..-+.|+.|+|++|+|... |-..+..-++|+.|+|++|+|...=-. ...-..++.+++++|
T Consensus 63 a~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 63 IEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCC
T ss_pred HHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCC
Confidence 34466778999999999999842 334454568999999999999642111 112245778888765
No 446
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=73.17 E-value=0.49 Score=46.61 Aligned_cols=62 Identities=10% Similarity=0.030 Sum_probs=17.9
Q ss_pred CccCccccccceeEEEEEEcCCCCeeEEEE------EEeeccC--ccchHHHHHHHHHHHcCCCCCceeEeeeee
Q 011508 162 SLENLIGAGSFGSVYKGIFDHDDHETLVAV------KVLNLQH--RGASKSFIAECQALRSIRHRNLVKIITSCV 228 (484)
Q Consensus 162 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~vav------K~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~~~~~~~ 228 (484)
.+.+.|| ||.||+|.+..+ ..+||+ |..+... ......+.+|..+++.++|+|+++.+++..
T Consensus 145 ~l~~~lG---fG~v~~g~~~~~--~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 145 PIYEHVG---YTTLNREPAYKK--HMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp CSTTTSS---BCCC-----------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred cccccCC---chhhhccccccc--CCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 4566777 999999998642 356888 6654322 222346788899999999999999887643
No 447
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=72.48 E-value=0.41 Score=28.48 Aligned_cols=26 Identities=15% Similarity=0.172 Sum_probs=12.1
Q ss_pred eEEehhhhhhHHHhhhhheeeeeecc
Q 011508 104 KLIIPIVTGILFLTGMSCLIITSWWS 129 (484)
Q Consensus 104 ~~~i~~v~~~~~~~~~~~~~~~~~~~ 129 (484)
..+.+++++.++.+++++.+.+++|+
T Consensus 11 GaIAGiVvG~v~gv~li~~l~~~~~r 36 (38)
T 2k1k_A 11 GEIVAVIFGLLLGAALLLGILVFRSR 36 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CceeeeehHHHHHHHHHHHHHHHHee
Confidence 33455666665544443333333343
No 448
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=61.00 E-value=13 Score=34.96 Aligned_cols=61 Identities=13% Similarity=0.146 Sum_probs=31.6
Q ss_pred hhhCCCCCCEEeCcCCccccccC-ccccCCCCCCeeeccccceecccccc-cccccCcccccCCC
Q 011508 13 SLSSLRGIENLDLSQNNLSGRIP-KYLENFPFLQNLNLSFNHFEGEVPIK-GVFSNSSAISLDGN 75 (484)
Q Consensus 13 ~~~~l~~l~~l~ls~N~l~g~~p-~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n 75 (484)
.+.++.+|+.+.+..+ ++ .++ ..+.+|.+|+.+.+.+|.++..-+.+ ..+.+|+.+.+..+
T Consensus 258 aF~~~~~l~~i~l~~~-i~-~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~ 320 (379)
T 4h09_A 258 LLQNCTALKTLNFYAK-VK-TVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA 320 (379)
T ss_dssp TTTTCTTCCEEEECCC-CS-EECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT
T ss_pred ccceeehhcccccccc-ce-eccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc
Confidence 3455666666666543 44 343 34566666666666666555322221 33445555555433
No 449
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=59.32 E-value=8.6 Score=36.56 Aligned_cols=60 Identities=13% Similarity=0.125 Sum_probs=34.7
Q ss_pred hhhCCCCCCEEeCcCCccccccC-ccccCCCCCCeeeccccceecccccc-cccccCcccccCCC
Q 011508 13 SLSSLRGIENLDLSQNNLSGRIP-KYLENFPFLQNLNLSFNHFEGEVPIK-GVFSNSSAISLDGN 75 (484)
Q Consensus 13 ~~~~l~~l~~l~ls~N~l~g~~p-~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n 75 (484)
.+..+.+|+.+.+..| ++ .|+ .++.+|.+|+.++|.++ ++-.-..+ ..+.+|+.+.+..|
T Consensus 292 ~F~~~~~L~~i~l~~~-i~-~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~ 353 (394)
T 4fs7_A 292 TFYGCSSLTEVKLLDS-VK-FIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS 353 (394)
T ss_dssp TTTTCTTCCEEEECTT-CC-EECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT
T ss_pred cccccccccccccccc-cc-eechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc
Confidence 4566777777777654 55 444 44667777777777644 43222211 33455666666554
No 450
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=58.35 E-value=14 Score=35.04 Aligned_cols=60 Identities=7% Similarity=0.192 Sum_probs=32.8
Q ss_pred hhhCCCCCCEEeCcCCccccccC-ccccCCCCCCeeeccccceeccccc-ccccccCcccccCCC
Q 011508 13 SLSSLRGIENLDLSQNNLSGRIP-KYLENFPFLQNLNLSFNHFEGEVPI-KGVFSNSSAISLDGN 75 (484)
Q Consensus 13 ~~~~l~~l~~l~ls~N~l~g~~p-~~~~~l~~L~~l~ls~N~l~g~~p~-~~~~~~~~~~~~~~n 75 (484)
.+.++++|+.+.+. +.++ .|+ .+|.+|.+|+.++|..| ++-.-.. ...+.+|+.+.+..+
T Consensus 283 aF~~c~~L~~i~l~-~~i~-~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s 344 (394)
T 4gt6_A 283 AFMNCPALQDIEFS-SRIT-ELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS 344 (394)
T ss_dssp TTTTCTTCCEEECC-TTCC-EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT
T ss_pred ccccccccccccCC-Cccc-ccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc
Confidence 45667777777775 4455 454 34666777777777654 3211111 133445555555443
No 451
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=47.11 E-value=2.3 Score=26.08 Aligned_cols=9 Identities=67% Similarity=0.947 Sum_probs=4.3
Q ss_pred EehhhhhhH
Q 011508 106 IIPIVTGIL 114 (484)
Q Consensus 106 ~i~~v~~~~ 114 (484)
+++.++|++
T Consensus 14 Ia~~vVGvl 22 (44)
T 2jwa_A 14 IISAVVGIL 22 (44)
T ss_dssp HHHHHHHHH
T ss_pred hHHHHHHHH
Confidence 444555533
No 452
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=39.09 E-value=24 Score=33.33 Aligned_cols=64 Identities=16% Similarity=0.144 Sum_probs=45.5
Q ss_pred cCc-hhhhCCCCCCEEeCcCCccccccC-ccccCCCCCCeeeccccceeccccc-ccccccCcccccCCC
Q 011508 9 NIP-SSLSSLRGIENLDLSQNNLSGRIP-KYLENFPFLQNLNLSFNHFEGEVPI-KGVFSNSSAISLDGN 75 (484)
Q Consensus 9 ~~p-~~~~~l~~l~~l~ls~N~l~g~~p-~~~~~l~~L~~l~ls~N~l~g~~p~-~~~~~~~~~~~~~~n 75 (484)
.|+ ..|.+|++|+.++|.++ ++ .|+ .+|.+|.+|+.+++..| ++..-.. ...+.+|+.+.+..|
T Consensus 310 ~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 310 FIGEEAFESCTSLVSIDLPYL-VE-EIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp EECTTTTTTCTTCCEECCCTT-CC-EECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred eechhhhcCCCCCCEEEeCCc-cc-EEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC
Confidence 344 46889999999999755 77 665 56889999999999876 5432222 244567777777655
No 453
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=37.08 E-value=25 Score=33.17 Aligned_cols=69 Identities=10% Similarity=0.191 Sum_probs=48.8
Q ss_pred CcccccCc-hhhhCCCCCCEEeCcCCccccccC-ccccCCCCCCeeeccccceeccccc-ccccccCcccccCCCc
Q 011508 4 NFFQGNIP-SSLSSLRGIENLDLSQNNLSGRIP-KYLENFPFLQNLNLSFNHFEGEVPI-KGVFSNSSAISLDGNV 76 (484)
Q Consensus 4 n~l~g~~p-~~~~~l~~l~~l~ls~N~l~g~~p-~~~~~l~~L~~l~ls~N~l~g~~p~-~~~~~~~~~~~~~~n~ 76 (484)
++++ .|+ ..|.+|++|+.++|..| ++ .|. .+|.+|.+|+.+.|..| ++-.-.. ...+.+|+.+.+.+|.
T Consensus 297 ~~i~-~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~ 368 (394)
T 4gt6_A 297 SRIT-ELPESVFAGCISLKSIDIPEG-IT-QILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSR 368 (394)
T ss_dssp TTCC-EECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCH
T ss_pred Cccc-ccCceeecCCCCcCEEEeCCc-cc-EehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCce
Confidence 3444 455 46888999999999865 66 554 56889999999999765 4422222 2456778888888874
No 454
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=34.57 E-value=51 Score=30.73 Aligned_cols=61 Identities=16% Similarity=0.286 Sum_probs=38.0
Q ss_pred hhhhCCCCCCEEeCcCCccccccC-ccccCCCCCCeeeccccceeccccc-ccccccCcccccCCC
Q 011508 12 SSLSSLRGIENLDLSQNNLSGRIP-KYLENFPFLQNLNLSFNHFEGEVPI-KGVFSNSSAISLDGN 75 (484)
Q Consensus 12 ~~~~~l~~l~~l~ls~N~l~g~~p-~~~~~l~~L~~l~ls~N~l~g~~p~-~~~~~~~~~~~~~~n 75 (484)
..+.++..|+.+.+..| ++ .|+ ..+.++.+|+.+.+..+ +...... ...+.+|+.+.+.++
T Consensus 234 ~~f~~~~~L~~i~lp~~-v~-~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~ 296 (379)
T 4h09_A 234 GAFYGMKALDEIAIPKN-VT-SIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNS 296 (379)
T ss_dssp TTTTTCSSCCEEEECTT-CC-EECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCT
T ss_pred ccccCCccceEEEcCCC-cc-EeCccccceeehhcccccccc-ceecccccccccccccccccccc
Confidence 45677888888888766 55 443 45677888888888654 3322211 234566666666554
No 455
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=31.82 E-value=7.3 Score=23.34 Aligned_cols=9 Identities=11% Similarity=0.394 Sum_probs=3.7
Q ss_pred ehhhhhhHH
Q 011508 107 IPIVTGILF 115 (484)
Q Consensus 107 i~~v~~~~~ 115 (484)
+++++|+++
T Consensus 17 ~~vv~Gv~l 25 (41)
T 2k9y_A 17 GGVAVGVVL 25 (41)
T ss_dssp HHHHHHHHH
T ss_pred eehhHHHHH
Confidence 334444443
No 456
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=27.55 E-value=1.2e+02 Score=30.61 Aligned_cols=47 Identities=19% Similarity=0.162 Sum_probs=34.4
Q ss_pred CHHHHHHHHHHHH--HHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccc
Q 011508 265 NLLQRLSIAVDVA--STLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAK 318 (484)
Q Consensus 265 ~~~~~~~i~~~i~--~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~ 318 (484)
.+..+..++..+| ..+.|+= || +|=.++||+++.+|++.=+|||...
T Consensus 453 ~~~a~~nF~~S~A~ySvv~YIL-----Gi--gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 453 SAEVMDTYVKSCAGYCVITYIL-----GV--GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH-----TC--CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred cHHHHHHHHHHHHHHhHhheee-----ec--cCCCCcceeEcCCCCEeeeehHHhh
Confidence 3555566666554 3455665 22 6888999999999999999999874
No 457
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=21.58 E-value=52 Score=33.80 Aligned_cols=45 Identities=22% Similarity=0.180 Sum_probs=32.6
Q ss_pred HHHHHHHHHHH--HHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccc
Q 011508 267 LQRLSIAVDVA--STLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAK 318 (484)
Q Consensus 267 ~~~~~i~~~i~--~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~ 318 (484)
..+..++..+| ..+.|+= || +|=.++||||+.+|.+.=+|||.+.
T Consensus 529 ~ar~nF~~SlA~~Svv~YIL-----Gl--GDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 529 EVMDTYIKSCAGYCVITYLL-----GV--GDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-----TC--CCCCTTTEEECTTSCEEECCCCSCT
T ss_pred HHHHHHHHHHHHHHHHHHHc-----cC--CCCCCcceEEeCCCCEEEEeehhhh
Confidence 34455555544 3455554 22 7889999999999999999999864
No 458
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=21.55 E-value=3.1e+02 Score=25.19 Aligned_cols=142 Identities=16% Similarity=0.127 Sum_probs=68.9
Q ss_pred ccCccccccceeEEEEEEcCCCCeeEEEEEEeeccCccchHHHHHHHHHHHcCCCCCceeEeeeeee------------e
Q 011508 163 LENLIGAGSFGSVYKGIFDHDDHETLVAVKVLNLQHRGASKSFIAECQALRSIRHRNLVKIITSCVS------------V 230 (484)
Q Consensus 163 ~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~------------~ 230 (484)
.++..-.|..|.++... ++..++||-. ..-..+-+-.++...-.+.-|+.- ++..... .
T Consensus 73 ~I~~s~~Gstgvff~~t-----d~~~~VVK~s---~~l~~E~l~s~LA~~LGlpiP~~R-iv~~~~~E~~e~~~~L~~~~ 143 (342)
T 1cja_A 73 GIERSEKGTEGLFFVET-----ESGVFIVKRS---TNIESETFCSLLCMRLGLHAPKVR-VVSSNSEEGTNMLECLAAID 143 (342)
T ss_dssp EEEECCSTTSCEEEEEE-----SSCEEEEECC---TTHHHHHHHHHHHHHHTCCCCCEE-EEESSSHHHHHHHHHHHHHC
T ss_pred EEEeccCCCCCeEEEEe-----CCCEEEEeCc---HHHHHHHHHHHHHHHhCCCCCCee-EEeeCcHHHHHHHHHHHHhh
Confidence 33445556555444444 2557888844 122334455566666666777632 2221100 0
Q ss_pred c------cCCCceeeEEeecccCCCHHHHHhhcCCCCCCCCHHHHHHHHHHHHH--HHHH-HHhcCCCCeee-cCCCCCC
Q 011508 231 D------FQGNDFEALVYELMVNGSLEEWLHLNRDAPRNLNLLQRLSIAVDVAS--TLEY-LHHYCETPIVH-CDLKPSN 300 (484)
Q Consensus 231 ~------~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~--~l~~-LH~~~~~~ivH-~dlk~~N 300 (484)
. .......+++|+|.+|..|.+.-... ....+.. +.+.++.+ ++.. ++.....+.+. .--.+.|
T Consensus 144 ~~~~~l~~l~~~~~~l~meyv~G~~L~e~~~~~--~~~~f~~----~~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~N 217 (342)
T 1cja_A 144 KSFRVITTLANQANILLMELVRGITLNKLTTTS--APEVLTK----STMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDN 217 (342)
T ss_dssp SSSCHHHHHTTCSEEEEEECCCEEESTTCCSSS--HHHHSCH----HHHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGG
T ss_pred hhhHHHHHhhcccceehhhhcCCCccccchhhh--hhhhcCH----HHHHhhchhheehhhhcCCccCcccccCCCChhh
Confidence 0 00122456999999876554321100 0001111 22333332 3333 44332333222 2257889
Q ss_pred eeecCCCc-eEEcccCcccc
Q 011508 301 VLLDGELT-AHVSDFGLAKF 319 (484)
Q Consensus 301 Ill~~~~~-~kl~Dfg~a~~ 319 (484)
|+++++.. +.++|-+.+..
T Consensus 218 IL~~~~n~~~~~IDhn~af~ 237 (342)
T 1cja_A 218 IMLSERGATVVPIDSKIIPL 237 (342)
T ss_dssp EEEESBTTCEEECSCCCCCC
T ss_pred eEEeCCCCeEEEEcCCcccc
Confidence 99987654 88899988754
No 459
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=20.05 E-value=1.6e+02 Score=31.87 Aligned_cols=60 Identities=18% Similarity=0.221 Sum_probs=38.8
Q ss_pred CHHHHHhhcCCCCCCCCHHHH-HHHHHHHH--HHHHHHHhcCCCCeeecCCCCCCeeecCCCceEEcccCccc
Q 011508 249 SLEEWLHLNRDAPRNLNLLQR-LSIAVDVA--STLEYLHHYCETPIVHCDLKPSNVLLDGELTAHVSDFGLAK 318 (484)
Q Consensus 249 sL~~~l~~~~~~~~~l~~~~~-~~i~~~i~--~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~a~ 318 (484)
.|.+|+.... ....+..+ ..++..+| ..+.|+= || +|=.++|||++.+|++.=+|||.+.
T Consensus 899 ~L~~~f~~~~---~~~~~~~ar~nF~~S~A~ysvv~YiL-----gi--gDRH~~NILid~tG~v~HIDFG~~f 961 (1091)
T 3hhm_A 899 TLHQWLKDKN---KGEIYDAAIDLFTRSCAGYCVATFIL-----GI--GDRHNSNIMVKDDGQLFHIDFGHFL 961 (1091)
T ss_dssp HHHHHHHTTS---CTTSHHHHHHHHHHHHHHHHHHHHHH-----TC--CCCCTTTEEEETTSCEEECCCCCCS
T ss_pred HHHHHHHhcC---ChHHHHHHHHHHHHHhhhhhheEEEE-----ee--cCCCCcceEEeCCCCEEEEeehhhh
Confidence 4566665433 22344443 34555444 3455554 22 7888999999999999999999874
Done!