Citrus Sinensis ID: 011512


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480----
MGVAVNSDFFKFTYEFRRHNLKQLDKNKPRVSCIASSSISKKIKRTTTITTHAAASSSPAPEQLLDVKTKQKSKRIAGIDQDELVDPKLLADPDSCFCEFNGVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYTILSMFLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTKPLRVKGWDRALVEFTAALLIDNESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFLQRAFGYSESEGKSMQAVS
cccccccccHHHHHHHHHHHHHHcccccccEEEEEcccccccccccccccccccccccccccccHHHHHHHccccccccccccccccccccccccccEEEccEEEEEEEcccccccccccccccccccccccccccccEEEEccccccHHcHHHHHHHHHcccccEEEEEcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHccccEEEEEEcHHHHHHHHHHHHcccHHHHHEEEccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHcHHccccHHHHHHHHHHHHHHcccccccccHHHHcccccccEEEEECccccccccHHHHHHHHHccccEEEEEcccccccccccHHHHHHHHHHHHHHHccccccccccccccc
****VNSDFFKFTYEFRRHNLKQ**K*********************************************************LVDPKLLADPDSCFCEFNGVHLHYKVYDAESQSHNSLQSQ**********KIGFPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYTILSMFLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTKPLRVKGWDRALVEFTAALLIDNESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFLQRAFG*************
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MGVAVNSDFFKFTYEFRRHNLKQLDKNKPRVSCIASSSISKKIKRTTTITTHAAASSSPAPEQLLDVKTKQKSKRIAGIDQDELVDPKLLADPDSCFCEFNGVHLHYKVYDAESQSHNSLQSQTASQLPPATKKIGFPMVLFHGFGASVFSWNRAMKPLAKTTSSKVLAFDRPAFGLTSRVFPFQQPTPDTENKKPLNPYSMAFSVLATLYFIDILAAEKAILVGHSAGALVAVNSYFEAPERVAALILIAPAILAPRLIQKVDEANPLGRNEQTERDTSNLVNLLKPFLKVYTILSMFLKYITQAMMQVAKGMADMLHSLYKKVLSATLRSAVGVTLVRILIDKFGLAAVRRAWYNSKEVAEHVIEGYTKPLRVKGWDRALVEFTAALLIDNESKMNPPLAKRLHEISCPVLIVTGDTDRIVPSWNAERLSRAIPGSTFEVIKNCGHVPQEEKVEEFVSIVARFLQRAFGYSESEGKSMQAVS

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 2WUE, chain A
Confidence level:very confident
Coverage over the Query: 97-113,135-182,197-297,311-333,354-468
View the alignment between query and template
View the model in PyMOL
Template: 1IUP, chain A
Confidence level:very confident
Coverage over the Query: 94-111,135-182,197-260,287-295,311-469
View the alignment between query and template
View the model in PyMOL
Template: 3U1T, chain A
Confidence level:very confident
Coverage over the Query: 93-111,135-181,197-263,287-328,356-474
View the alignment between query and template
View the model in PyMOL
Template: 2Y6U, chain A
Confidence level:confident
Coverage over the Query: 93-116,129-184,195-297,312-318,333-472
View the alignment between query and template
View the model in PyMOL