BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011514
(484 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q96MC6|HIAT1_HUMAN Hippocampus abundant transcript 1 protein OS=Homo sapiens GN=HIAT1
PE=2 SV=2
Length = 490
Score = 72.8 bits (177), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 91/425 (21%), Positives = 164/425 (38%), Gaps = 86/425 (20%)
Query: 13 LFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIG 72
+F+ F WG T A T V + P ++G Q + GL + + P+IG
Sbjct: 44 IFLEFFAWGLLT-----APTLVVLHETFP-----KHTFLMNGLIQGVKGLLSFLSAPLIG 93
Query: 73 NLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY 132
LSD +GRK+ L L + + P+ ++ + S +++A ++ + A+ + AY
Sbjct: 94 ALSDVWGRKSFLLLTVFFTCAPIPLM--KISPWWYFAVISVSGVFAVTFS-----VVFAY 146
Query: 133 VADNISERQRASAFGILLGVLSASFVC----GTLAARFLSTTSAFQAATIVSMLAAAYMR 188
VAD E +R+ A+G++ +AS V G R + AT +++L ++
Sbjct: 147 VADITQEHERSMAYGLVSATFAASLVTSPAIGAYLGRVYGDSLVVVLATAIALLDICFIL 206
Query: 189 VFLKDDVPND-DDDDLTRPIITEETEGVNQNESNSPVKIPVCKKI--PSIRDLICLLRSS 245
V + + +P PI E+ + KK+ SI LIC
Sbjct: 207 VAVPESLPEKMRPASWGAPISWEQAD-----------PFASLKKVGQDSIVLLIC----- 250
Query: 246 VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPL 305
+ F S L E G +SF +L+ F+ A + + G+ I+Q + + L
Sbjct: 251 -------ITVFLSYLPEAGQYSSFFLYLRQIMKFSPESVAAFIAVLGILSIIAQTIVLSL 303
Query: 306 LAPILGEAKLLSLGLFAACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVL 365
L +G + LGL + + W++
Sbjct: 304 LMRSIGNKNTILLGLGFQILQLAWYGFGSEPWMM-------------------------- 337
Query: 366 LLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIV 425
+A A + + P+ ++VS+ ++QG QG I+GI N +
Sbjct: 338 -------------WAAGAVAAMSSITFPAVSALVSRTADADQQGVVQGMITGIRGLCNGL 384
Query: 426 SPLIF 430
P ++
Sbjct: 385 GPALY 389
>sp|P70187|HIAT1_MOUSE Hippocampus abundant transcript 1 protein OS=Mus musculus GN=Hiat1
PE=2 SV=3
Length = 490
Score = 72.8 bits (177), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 91/425 (21%), Positives = 164/425 (38%), Gaps = 86/425 (20%)
Query: 13 LFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIG 72
+F+ F WG T A T V + P ++G Q + GL + + P+IG
Sbjct: 44 IFLEFFAWGLLT-----APTLVVLHETFP-----KHTFLMNGLIQGVKGLLSFLSAPLIG 93
Query: 73 NLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY 132
LSD +GRK+ L L + + P+ ++ + S +++A ++ + A+ + AY
Sbjct: 94 ALSDVWGRKSFLLLTVFFTCAPIPLM--KISPWWYFAVISVSGVFAVTFS-----VVFAY 146
Query: 133 VADNISERQRASAFGILLGVLSASFVC----GTLAARFLSTTSAFQAATIVSMLAAAYMR 188
VAD E +R+ A+G++ +AS V G R + AT +++L ++
Sbjct: 147 VADITQEHERSMAYGLVSATFAASLVTSPAIGAYLGRVYGDSLVVVLATAIALLDICFIL 206
Query: 189 VFLKDDVPND-DDDDLTRPIITEETEGVNQNESNSPVKIPVCKKI--PSIRDLICLLRSS 245
V + + +P PI E+ + KK+ SI LIC
Sbjct: 207 VAVPESLPEKMRPASWGAPISWEQAD-----------PFASLKKVGQDSIVLLIC----- 250
Query: 246 VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPL 305
+ F S L E G +SF +L+ F+ A + + G+ I+Q + + L
Sbjct: 251 -------ITVFLSYLPEAGQYSSFFLYLRQIMKFSPESVAAFIAVLGILSIIAQTIVLSL 303
Query: 306 LAPILGEAKLLSLGLFAACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVL 365
L +G + LGL + + W++
Sbjct: 304 LMRSIGNKNTILLGLGFQILQLAWYGFGSEPWMM-------------------------- 337
Query: 366 LLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIV 425
+A A + + P+ ++VS+ ++QG QG I+GI N +
Sbjct: 338 -------------WAAGAVAAMSSITFPAVSALVSRTADADQQGVVQGMITGIRGLCNGL 384
Query: 426 SPLIF 430
P ++
Sbjct: 385 GPALY 389
>sp|Q5SR56|HIAL1_HUMAN Hippocampus abundant transcript-like protein 1 OS=Homo sapiens
GN=HIATL1 PE=2 SV=3
Length = 506
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/379 (21%), Positives = 151/379 (39%), Gaps = 62/379 (16%)
Query: 52 LSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYY 111
++G Q + GL + + P+IG LSD +GRK L + + P+ ++ R S +++A
Sbjct: 81 MNGLIQGVKGLLSFLSAPLIGALSDVWGRKPFLLGTVFFTCFPIPLM--RISPWWYFAMI 138
Query: 112 ALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLSTTS 171
++ + ++ + AYVAD E +R++A+G + +AS V +LS +
Sbjct: 139 SVSGVFSVTF-----SVIFAYVADVTQEHERSTAYGWVSATFAASLVSSPAIGAYLSASY 193
Query: 172 AFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKK 231
+V+ + A F+ VP + + RP+ Q + + +K V K
Sbjct: 194 GDSLVVLVATVVALLDICFILVAVPESLPEKM-RPVSWGAQISWKQADPFASLK-KVGKD 251
Query: 232 IPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIA 291
S LIC + F S L E G +SF +L+ F + A + +
Sbjct: 252 --STVLLIC------------ITVFLSYLPEAGQYSSFFLYLRQVIGFGSVKIAAFIAMV 297
Query: 292 GLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVIKIFFNKVFKLLL 351
G+ ++Q F+ +L LG + LGL + + AW++
Sbjct: 298 GILSIVAQTAFLSILMRSLGNKNTVLLGLGFQMLQLAWYGFGSQAWMM------------ 345
Query: 352 LSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKA 411
+A + + P+ ++VS+ ++QG A
Sbjct: 346 ---------------------------WAAGTVAAMSSITFPAISALVSRNAESDQQGVA 378
Query: 412 QGCISGISSFANIVSPLIF 430
QG I+GI N + P ++
Sbjct: 379 QGIITGIRGLCNGLGPALY 397
>sp|P02982|TCR1_ECOLX Tetracycline resistance protein, class A OS=Escherichia coli
GN=tetA PE=3 SV=2
Length = 399
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 78/368 (21%), Positives = 148/368 (40%), Gaps = 69/368 (18%)
Query: 69 PVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCL 128
PV+G LSD++GR+ +L + L + + AI+A + F + Y R + + G+ +
Sbjct: 61 PVLGALSDRFGRRPVLLVSLAGAAVDYAIMA---TAPFLWVLYIGRIVAGIT--GATGAV 115
Query: 129 ALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLSTTSAFQAATIVSMLAAAYMR 188
A AY+AD +RA FG + V G + + S + L
Sbjct: 116 AGAYIADITDGDERARHFGFMSACFGFGMVAGPVLGGLMGGFSPHAPFFAAAAL------ 169
Query: 189 VFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTL 248
+ + LT + E+ P++ + S R +T+
Sbjct: 170 ---------NGLNFLTGCFLLPES----HKGERRPLRREALNPLASFR-----WARGMTV 211
Query: 249 SQAAVVAFFSGLSEGGMQAS-FLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLA 307
A + FF G + A+ ++ F + +FH++ + G+ +++Q + +A
Sbjct: 212 VAALMAVFFIMQLVGQVPAALWVIFGEDRFHWDATTIGISLAAFGILHSLAQAMITGPVA 271
Query: 308 PILGEAKLLSLGLFAACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLL 367
LGE + L LG+ A +LL+F TR ++ +++L
Sbjct: 272 ARLGERRALMLGMIADGTGY----------------------ILLAFATRGWMAFPIMVL 309
Query: 368 KILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSP 427
I M P+ ++++S+QV QG+ QG ++ ++S +IV P
Sbjct: 310 LASGGIGM-----------------PALQAMLSRQVDEERQGQLQGSLAALTSLTSIVGP 352
Query: 428 LIFSPLTA 435
L+F+ + A
Sbjct: 353 LLFTAIYA 360
>sp|A4IF94|HIAL1_BOVIN Hippocampus abundant transcript-like protein 1 OS=Bos taurus
GN=HIATL1 PE=2 SV=1
Length = 502
Score = 66.6 bits (161), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 85/379 (22%), Positives = 155/379 (40%), Gaps = 62/379 (16%)
Query: 52 LSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYY 111
++G Q + GL + + P+IG LSD +GRK L + + P+ ++ R S +++A
Sbjct: 78 MNGLIQGVKGLLSFLSAPLIGALSDVWGRKPFLLGTVFFTCFPIPLM--RISPWWYFAMI 135
Query: 112 ALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLSTTS 171
++ + ++ + AYVAD E +R++A+G + +AS V +LS +
Sbjct: 136 SISGVFSVTFS-----VIFAYVADVTQEHERSTAYGWVSATFAASLVSSPAIGAYLSASY 190
Query: 172 AFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKK 231
+V+ + A F+ VP + + RP+ Q + + +K V K
Sbjct: 191 GDSLVVLVATVVALLDICFILLAVPESLPEKM-RPLSWGARISWKQADPFASLK-KVGKD 248
Query: 232 IPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIA 291
S LIC + F S L E G +SF +L+ F + A + +
Sbjct: 249 --STILLIC------------ITVFLSYLPEAGQYSSFFLYLRQVIGFGSIKIAAFIAMV 294
Query: 292 GLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVIKIFFNKVFKLLL 351
G+ ++Q +F+ L LG + LGL ++F+L
Sbjct: 295 GILSIVAQTVFLTSLMRSLGNKNTVLLGLGF----------------------QMFQLAW 332
Query: 352 LSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKA 411
F ++ + ++ + SI P+ ++VS+ N+QG A
Sbjct: 333 YGFGSQAWMMWAAGIVAAVSSI-----------------TFPAVSTLVSQNADSNQQGVA 375
Query: 412 QGCISGISSFANIVSPLIF 430
QG I+GI N + P ++
Sbjct: 376 QGIITGIRGLCNGLGPALY 394
>sp|Q8CIA9|HIAL1_MOUSE Hippocampus abundant transcript-like protein 1 OS=Mus musculus
GN=Hiatl1 PE=2 SV=3
Length = 507
Score = 65.5 bits (158), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 79/380 (20%), Positives = 147/380 (38%), Gaps = 64/380 (16%)
Query: 52 LSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYY 111
++G Q + GL + + P+IG LSD +GRK L + + P+ ++ + Y+
Sbjct: 83 MNGLIQGVKGLLSFLSAPLIGALSDVWGRKPFLLGTVFFTCFPIPLMRINP-----WWYF 137
Query: 112 ALRTLTAMVCEGSIN-CLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLSTT 170
+ +++ + S+ + AYVAD E +R++A+G + +AS V +LS
Sbjct: 138 GMISVSGVF---SVTFSVIFAYVADFTQEHERSTAYGWVSATFAASLVSSPAIGTYLSAN 194
Query: 171 SAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCK 230
+V+ L A F+ VP + + RP Q + + +K V K
Sbjct: 195 YGDSLVVLVATLVALLDICFILIAVPESLSEKI-RPASWGAQISWKQADPFASLK-KVGK 252
Query: 231 KIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLI 290
S LIC + F S L E G +SF +L+ F + + +
Sbjct: 253 D--STVLLIC------------ITVFLSYLPEAGQYSSFFLYLRQVIGFGSVKIVAFIAM 298
Query: 291 AGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVIKIFFNKVFKLL 350
G+ ++Q +F+ L LG + LGL + + AW++
Sbjct: 299 VGILSIVAQTVFLSKLMRSLGNKNTVLLGLGFQMLQLAWYGFGSQAWMM----------- 347
Query: 351 LLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGK 410
+A + + P+ +++S+ ++QG
Sbjct: 348 ----------------------------WAAGTVAAMSSITFPAVSALISRNAESDQQGV 379
Query: 411 AQGCISGISSFANIVSPLIF 430
AQG ++GI N + P ++
Sbjct: 380 AQGIVTGIRGLCNGLGPALY 399
>sp|B2RYH9|HIAL1_RAT Hippocampus abundant transcript-like protein 1 OS=Rattus norvegicus
GN=Hiatl1 PE=2 SV=1
Length = 507
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/386 (20%), Positives = 151/386 (39%), Gaps = 62/386 (16%)
Query: 52 LSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYY 111
++G Q + GL + + P+IG LSD +GRK L + + P+ ++ R S +++
Sbjct: 83 MNGLIQGVKGLLSFLSAPLIGALSDVWGRKPFLLGTVFFTCFPIPLM--RISPWWYFGMI 140
Query: 112 ALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLSTTS 171
++ + ++ + AYVAD E +R++A+G + +AS V +LS+
Sbjct: 141 SVSGVFSVTF-----SVIFAYVADFTQEHERSTAYGWVSATFAASLVSSPAIGTYLSSNY 195
Query: 172 AFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKK 231
+V+ + A F+ VP + + RP Q + + +K V K
Sbjct: 196 GDSLVVLVATVVALLDICFILVAVPESLPEKI-RPASWGAQISWKQADPFASLK-KVGKD 253
Query: 232 IPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIA 291
S LIC + F S L E G +SF +L+ F + + +
Sbjct: 254 --STVLLIC------------ITVFLSYLPEAGQYSSFFLYLRQVIGFGSVKIVAFIAMV 299
Query: 292 GLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVIKIFFNKVFKLLL 351
G+ ++Q +F+ L LG + LGL + + AW++
Sbjct: 300 GILSILAQTVFLSKLMRSLGNKNTVLLGLGFQILQLAWYGFGAQAWMM------------ 347
Query: 352 LSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKA 411
+A + + P+ +++S+ ++QG A
Sbjct: 348 ---------------------------WAAGTVAAMSSITFPAVSALISRNAESDQQGVA 380
Query: 412 QGCISGISSFANIVSPLIFSPLTALF 437
QG I+GI N + P ++ + LF
Sbjct: 381 QGIITGIRGLCNGLGPALYGFIFYLF 406
>sp|Q07282|TCR5_ECOLX Tetracycline resistance protein, class E OS=Escherichia coli
GN=tetA PE=3 SV=1
Length = 405
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 81/371 (21%), Positives = 154/371 (41%), Gaps = 74/371 (19%)
Query: 65 LVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGS 124
++ P++G SD+ GR+ +L L L + + A++A + S + Y R + + G+
Sbjct: 55 VIFAPLLGRWSDRIGRRPVLLLSLLGATLDYALMA---TASVVWVLYLGRLIAGI--TGA 109
Query: 125 INCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF---LSTTSAFQAATIVSM 181
+A + +AD E R FG++ + G + F LS + F A ++
Sbjct: 110 TGAVAASTIADVTPEESRTHWFGMMGACFGGGMIAGPVIGGFAGQLSVQAPFMFAAAING 169
Query: 182 LAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICL 241
LA + +F+ + N + +++E + NE+ S SIR++I
Sbjct: 170 LAF-LVSLFILHETHNANQ-------VSDELKNETINETTS-----------SIREMISP 210
Query: 242 LRSSVTLSQAAVVAFFSGLSEGGMQAS-FLYFLKAQFHFNKNQFADLMLIAGLAGTISQL 300
L +V FF G + A+ ++ F + +F ++ + + GL + Q
Sbjct: 211 L-------SGLLVVFFIIQLIGQIPATLWVLFGEERFAWDGVMVGVSLAVFGLTHALFQG 263
Query: 301 LFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQI 360
L +A LGE K +++G+ A +F LL+ IT+ +
Sbjct: 264 LAAGFIAKHLGERKAIAVGILADGCGLF----------------------LLAVITQSWM 301
Query: 361 SVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISS 420
VLLL I + P+ + I+S +VG QG+ QG ++ ++
Sbjct: 302 VWPVLLLLACGGITL-----------------PALQGIISVRVGQVAQGQLQGVLTSLTH 344
Query: 421 FANIVSPLIFS 431
++ PL+F+
Sbjct: 345 LTAVIGPLVFA 355
>sp|P51563|TCR7_VIBAN Tetracycline resistance protein, class G OS=Vibrio anguillarum
GN=tetA PE=3 SV=1
Length = 393
Score = 55.5 bits (132), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 147/386 (38%), Gaps = 80/386 (20%)
Query: 65 LVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGS 124
+V P++G LSD YGR+ +L L + + I+A S + Y R ++ + G+
Sbjct: 55 VVFAPMLGQLSDSYGRRPVLLASLAGAAVDYTIMA---SAPVLWVLYIGRLVSGV--TGA 109
Query: 125 INCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLSTTSA---FQAATIVSM 181
+A + +AD+ E RA FG + A + G L SA F AA +++
Sbjct: 110 TGAVAASTIADSTGEGSRARWFGYMGACYGAGMIAGPALGGMLGGISAHAPFIAAALLNG 169
Query: 182 LAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICL 241
A +FLK+ T + G + PV+ I+ + L
Sbjct: 170 FAFLLACIFLKE---------------THHSHG----GTGKPVR---------IKPFVLL 201
Query: 242 LRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGT--ISQ 299
A+ A F + G + L+ + + F N + +A T I Q
Sbjct: 202 RLDDALRGLGALFAVFFIIQLIGQVPAALWVIYGEDRFQWNTATVGLSLAAFGATHAIFQ 261
Query: 300 LLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQ 359
L+ LGE + L G+ A +LL+F T+
Sbjct: 262 AFVTGPLSSRLGERRTLLFGMAADGTG----------------------FVLLAFATQGW 299
Query: 360 ISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGIS 419
+ +LLL + M P+ ++++S V N+QG QG ++ ++
Sbjct: 300 MVFPILLLLAAGGVGM-----------------PALQAMLSNNVSSNKQGALQGTLTSLT 342
Query: 420 SFANIVSPLIFSPLTALFLSKGAPFN 445
+ ++I PL F TAL+ + +N
Sbjct: 343 NLSSIAGPLGF---TALYSATAGAWN 365
>sp|P02980|TCR2_ECOLX Tetracycline resistance protein, class B OS=Escherichia coli
GN=tetA PE=1 SV=1
Length = 401
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 91/430 (21%), Positives = 171/430 (39%), Gaps = 82/430 (19%)
Query: 58 AIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLT 117
A+ L ++ P +G +SD++GR+ +L L L + + +LA+ ++ Y L +T
Sbjct: 48 ALYALMQVIFAPWLGKMSDRFGRRPVLLLSLIGASLDYLLLAFSSALWMLYLGRLLSGIT 107
Query: 118 AMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF---LSTTSAFQ 174
G+ +A + +AD S QR FG L + G + F +S S F
Sbjct: 108 -----GATGAVAASVIADTTSASQRVKWFGWLGASFGLGLIAGPIIGGFAGEISPHSPFF 162
Query: 175 AATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPS 234
A +++++ + + ++ D+ D TE + +SNS V I + K +P
Sbjct: 163 IAALLNIVTFLVVMFWFRETKNTRDNTD---------TEVGVETQSNS-VYITLFKTMPI 212
Query: 235 IRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQAS-FLYFLKAQFHFNKNQFADLMLIAGL 293
+ ++ +FS G + A+ ++ F + +F +N + GL
Sbjct: 213 L-----------------LIIYFSAQLIGQIPATVWVLFTENRFGWNSMMVGFSLAGLGL 255
Query: 294 AGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVIKIFFNKVFKLLLLS 353
++ Q +A GE + LG FI S L+
Sbjct: 256 LHSVFQAFVAGRIATKWGEKTAVLLG--------FIADSS--------------AFAFLA 293
Query: 354 FITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQG 413
FI+ + VL+L I A P+ + ++S Q ++QG QG
Sbjct: 294 FISEGWLVFPVLILLAGGGI-----------------ALPALQGVMSIQTKSHQQGALQG 336
Query: 414 CISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASM-VAFIQSLMMSHTP 472
+ +++ ++ PL+F A+ + P + G+ I IGLA + + S+ TP
Sbjct: 337 LLVSLTNATGVIGPLLF----AVIYNHSLPI-WDGW-IWIIGLAFYCIIILLSMTFMLTP 390
Query: 473 ASSKSQNQCC 482
+ S+ +
Sbjct: 391 QAQGSKQETS 400
>sp|P39843|BMR2_BACSU Multidrug resistance protein 2 OS=Bacillus subtilis (strain 168)
GN=blt PE=3 SV=1
Length = 400
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 90/407 (22%), Positives = 157/407 (38%), Gaps = 73/407 (17%)
Query: 54 GFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYAL 113
G+ A + L+ P G D++GRK M+ L L + + I +S FY L
Sbjct: 48 GYLVAAFAISQLITSPFAGRWVDRFGRKKMIILGLLIFSLSELIFGLGTHVSIFYFSRIL 107
Query: 114 RTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLSTTSA- 172
++A ++ AYVAD + ++R+ A G + +S F+ G A F++
Sbjct: 108 GGVSAAFIMPAVT----AYVADITTLKERSKAMGYVSAAISTGFIIGPGAGGFIAGFGIR 163
Query: 173 --FQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCK 230
F A+ ++++AA LK+ + ++ L+ + ESN
Sbjct: 164 MPFFFASAIALIAAVTSVFILKESLSIEERHQLSS----------HTKESN--------- 204
Query: 231 KIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLI 290
I+DL + + A ++ F + F F +F F A ++ I
Sbjct: 205 ---FIKDLKRSIHPVYFI--AFIIVFVMAFGLSAYETVFSLFSDHKFGFTPKDIAAIITI 259
Query: 291 AGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVIKIFFNKVFKLL 350
+ + + Q+L L LGE +++ L L I F+ ++
Sbjct: 260 SSIVAVVIQVLLFGKLVNKLGEKRMIQLCLITGAILAFVSTV------------------ 301
Query: 351 LLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGK 410
+ F+T ++ + L AF +L P+ + +S G N+QG
Sbjct: 302 MSGFLTVLLVTCFIFL----------------AFDLL----RPALTAHLSNMAG-NQQGF 340
Query: 411 AQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLA 457
G S +S NI P + L L + PF F GF +M +GL
Sbjct: 341 VAGMNSTYTSLGNIFGPALGGILFDLNIHY--PFLFAGF-VMIVGLG 384
>sp|P02981|TCR3_ECOLX Tetracycline resistance protein, class C OS=Escherichia coli
GN=tetA PE=1 SV=1
Length = 396
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 5/103 (4%)
Query: 69 PVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCL 128
PV+G LSD++GR+ +L L + I AI+A + + YA R + + G+ +
Sbjct: 61 PVLGALSDRFGRRPVLLASLLGATIDYAIMA---TTPVLWILYAGRIVAGI--TGATGAV 115
Query: 129 ALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLSTTS 171
A AY+AD RA FG++ V G +A L S
Sbjct: 116 AGAYIADITDGEDRARHFGLMSACFGVGMVAGPVAGGLLGAIS 158
Score = 40.8 bits (94), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 43/68 (63%), Gaps = 8/68 (11%)
Query: 383 AFSVLVVFAT-----PSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 437
AF ++++ A+ P+ ++++S+QV + QG+ QG ++ ++S +I PLI +TA++
Sbjct: 303 AFPIMILLASGGIGMPALQAMLSRQVDDDHQGQLQGSLAALTSLTSITGPLI---VTAIY 359
Query: 438 LSKGAPFN 445
+ + +N
Sbjct: 360 AASASTWN 367
>sp|P71678|MFS55_MYCTU MFS-type drug efflux transporter P55 OS=Mycobacterium tuberculosis
GN=Rv1410c PE=1 SV=1
Length = 518
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 62 LGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVC 121
LG + MP++G SD++GRK ML + L II + A F+ A RT+ V
Sbjct: 56 LGYIAAMPLLGRASDRFGRKLMLQVSLAGFIIGSVVTALAGHFGDFHMLIAGRTIQG-VA 114
Query: 122 EGSINCLALAYVADNISERQRASAFG 147
G++ + LA AD S+R RA G
Sbjct: 115 SGALLPITLALGADLWSQRNRAGVLG 140
>sp|C6DTH3|MFS55_MYCTK MFS-type drug efflux transporter P55 OS=Mycobacterium tuberculosis
(strain KZN 1435 / MDR) GN=TBMG_02570 PE=3 SV=1
Length = 518
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 62 LGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVC 121
LG + MP++G SD++GRK ML + L II + A F+ A RT+ V
Sbjct: 56 LGYIAAMPLLGRASDRFGRKLMLQVSLAGFIIGSVVTALAGHFGDFHMLIAGRTIQG-VA 114
Query: 122 EGSINCLALAYVADNISERQRASAFG 147
G++ + LA AD S+R RA G
Sbjct: 115 SGALLPITLALGADLWSQRNRAGVLG 140
>sp|A5WM93|MFS55_MYCTF MFS-type drug efflux transporter P55 OS=Mycobacterium tuberculosis
(strain F11) GN=TBFG_11439 PE=3 SV=1
Length = 518
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 62 LGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVC 121
LG + MP++G SD++GRK ML + L II + A F+ A RT+ V
Sbjct: 56 LGYIAAMPLLGRASDRFGRKLMLQVSLAGFIIGSVVTALAGHFGDFHMLIAGRTIQG-VA 114
Query: 122 EGSINCLALAYVADNISERQRASAFG 147
G++ + LA AD S+R RA G
Sbjct: 115 SGALLPITLALGADLWSQRNRAGVLG 140
>sp|A5U2B2|MFS55_MYCTA MFS-type drug efflux transporter P55 OS=Mycobacterium tuberculosis
(strain ATCC 25177 / H37Ra) GN=MRA_1419 PE=3 SV=1
Length = 518
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 62 LGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVC 121
LG + MP++G SD++GRK ML + L II + A F+ A RT+ V
Sbjct: 56 LGYIAAMPLLGRASDRFGRKLMLQVSLAGFIIGSVVTALAGHFGDFHMLIAGRTIQG-VA 114
Query: 122 EGSINCLALAYVADNISERQRASAFG 147
G++ + LA AD S+R RA G
Sbjct: 115 SGALLPITLALGADLWSQRNRAGVLG 140
>sp|C1AN55|MFS55_MYCBT MFS-type drug efflux transporter P55 OS=Mycobacterium bovis (strain
BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=JTY_1446
PE=3 SV=1
Length = 518
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 62 LGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVC 121
LG + MP++G SD++GRK ML + L II + A F+ A RT+ V
Sbjct: 56 LGYIAAMPLLGRASDRFGRKLMLQVSLAGFIIGSVVTALAGHFGDFHMLIAGRTIQG-VA 114
Query: 122 EGSINCLALAYVADNISERQRASAFG 147
G++ + LA AD S+R RA G
Sbjct: 115 SGALLPITLALGADLWSQRNRAGVLG 140
>sp|A1KIJ9|MFS55_MYCBP MFS-type drug efflux transporter P55 OS=Mycobacterium bovis (strain
BCG / Pasteur 1173P2) GN=BCG_1471c PE=1 SV=1
Length = 518
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 62 LGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVC 121
LG + MP++G SD++GRK ML + L II + A F+ A RT+ V
Sbjct: 56 LGYIAAMPLLGRASDRFGRKLMLQVSLAGFIIGSVVTALAGHFGDFHMLIAGRTIQG-VA 114
Query: 122 EGSINCLALAYVADNISERQRASAFG 147
G++ + LA AD S+R RA G
Sbjct: 115 SGALLPITLALGADLWSQRNRAGVLG 140
>sp|Q7U042|MFS55_MYCBO MFS-type drug efflux transporter P55 OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=Mb1445c PE=3 SV=1
Length = 518
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 62 LGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVC 121
LG + MP++G SD++GRK ML + L II + A F+ A RT+ V
Sbjct: 56 LGYIAAMPLLGRASDRFGRKLMLQVSLAGFIIGSVVTALAGHFGDFHMLIAGRTIQG-VA 114
Query: 122 EGSINCLALAYVADNISERQRASAFG 147
G++ + LA AD S+R RA G
Sbjct: 115 SGALLPITLALGADLWSQRNRAGVLG 140
>sp|Q9D2V8|MFS10_MOUSE Major facilitator superfamily domain-containing protein 10 OS=Mus
musculus GN=Mfsd10 PE=2 SV=1
Length = 456
Score = 40.8 bits (94), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 62/131 (47%), Gaps = 5/131 (3%)
Query: 69 PVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCL 128
P+ G SD GR+ ++ L LT I A+ A RS F A+ A R + + +G++N L
Sbjct: 106 PLTGAASDYLGRRPVMMLSLTGLAISYAVWATSRS---FKAFLASRVIGG-ISKGNVN-L 160
Query: 129 ALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLSTTSAFQAATIVSMLAAAYMR 188
+ A VAD S R+ ++ S +F G + FLS + + ++ ++
Sbjct: 161 STAIVADLGSPPTRSQGMAVIGVAFSLAFTLGPMLGAFLSVEMVPWISLLFAISDMLFIF 220
Query: 189 VFLKDDVPNDD 199
FL + +P +
Sbjct: 221 CFLPETLPQEK 231
>sp|Q80UJ1|S22AK_MOUSE Solute carrier family 22 member 20 OS=Mus musculus GN=Slc22a20 PE=1
SV=1
Length = 556
Score = 38.1 bits (87), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 53/113 (46%), Gaps = 12/113 (10%)
Query: 52 LSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAIL-AYRRSISFFYAY 110
L Q+I G LV + G L+D+ GRKA PL S + LA+ A + F AY
Sbjct: 135 LRDLAQSIYMSGVLVGAALFGGLADRLGRKA----PLVWSYLQLAVSGAATAYVGSFSAY 190
Query: 111 YALRTLTAMVCEGSI-NCLALAYVADNISERQRASAFGILLGVLSASFVCGTL 162
R L M G I N L+L V + + R R A GILLG SF G L
Sbjct: 191 CVFRFLMGMTFSGIILNSLSL--VVEWMPTRGRTVA-GILLGF---SFTLGQL 237
>sp|P0A4K5|PMRA_STRR6 Multi-drug resistance efflux pump PmrA OS=Streptococcus pneumoniae
(strain ATCC BAA-255 / R6) GN=pmrA PE=3 SV=1
Length = 399
Score = 37.7 bits (86), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 80/194 (41%), Gaps = 29/194 (14%)
Query: 42 GLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYR 101
G+ +A Y +G ++ + + P+ G L+D+YGRK M+ I + LA+
Sbjct: 39 GVGSQQVAFY-AGLAISVSAISAALFSPIWGILADKYGRKPMMIRAGLAMTITMGGLAFV 97
Query: 102 RSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGT 161
+I Y LR L + N AL +A + + + SA LG LS V GT
Sbjct: 98 PNI---YWLIFLRLLNGVFAGFVPNATAL--IASQVPKEKSGSA----LGTLSTGVVAGT 148
Query: 162 LAARFLSTTSA--FQAATIVSM------LAAAYMRVFLKDDVPNDDDDDLTRPIITEETE 213
L F+ A F T+ + LAA F+K+D +P+ E+
Sbjct: 149 LTGPFIGGFIAELFGIRTVFLLVGSFLFLAAILTICFIKEDF---------QPVAKEKA- 198
Query: 214 GVNQNESNSPVKIP 227
+ E + VK P
Sbjct: 199 -IPTKELFTSVKYP 211
>sp|P0A4K4|PMRA_STRPN Multi-drug resistance efflux pump PmrA OS=Streptococcus pneumoniae
serotype 4 (strain ATCC BAA-334 / TIGR4) GN=pmrA PE=3
SV=1
Length = 399
Score = 37.7 bits (86), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 80/194 (41%), Gaps = 29/194 (14%)
Query: 42 GLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYR 101
G+ +A Y +G ++ + + P+ G L+D+YGRK M+ I + LA+
Sbjct: 39 GVGSQQVAFY-AGLAISVSAISAALFSPIWGILADKYGRKPMMIRAGLAMTITMGGLAFV 97
Query: 102 RSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGT 161
+I Y LR L + N AL +A + + + SA LG LS V GT
Sbjct: 98 PNI---YWLIFLRLLNGVFAGFVPNATAL--IASQVPKEKSGSA----LGTLSTGVVAGT 148
Query: 162 LAARFLSTTSA--FQAATIVSM------LAAAYMRVFLKDDVPNDDDDDLTRPIITEETE 213
L F+ A F T+ + LAA F+K+D +P+ E+
Sbjct: 149 LTGPFIGGFIAELFGIRTVFLLVGSFLFLAAILTICFIKEDF---------QPVAKEKA- 198
Query: 214 GVNQNESNSPVKIP 227
+ E + VK P
Sbjct: 199 -IPTKELFTSVKYP 211
>sp|P39637|YWFA_BACSU Uncharacterized MFS-type transporter YwfA OS=Bacillus subtilis
(strain 168) GN=ywfA PE=3 SV=1
Length = 412
Score = 37.4 bits (85), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 29/180 (16%)
Query: 4 EKEIKTLSH--------LFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGF 55
+IKT H L + VF G +++ P + D +A D LA+ +S
Sbjct: 6 NNDIKTKHHFPLLLALALTMGVFAAGSEELVISPLLPD---LAKAFSSDVSVLALSIS-- 60
Query: 56 QQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRT 115
I G+ + P++ L D+Y R+ L L + II I A ++I FF+ AL
Sbjct: 61 ---IYGVMIFIGAPLLVPLGDKYSRELSLLAGLMIFIIGTVICALAQNIFFFFLGRALSG 117
Query: 116 LTAMVCEGSINCLALAYVADNISERQRASAFGILL---------GVLSASFVCGTLAARF 166
L A G+ A A V D + R G+++ GV SF+ G L R+
Sbjct: 118 LAA----GAFVPTAYAVVGDRVPYTYRGKVMGLIVSSWSLALIFGVPLGSFIGGVLHWRW 173
>sp|P51564|TCR8_PASMD Tetracycline resistance protein, class H OS=Pasteurella multocida
GN=tetA PE=3 SV=1
Length = 400
Score = 36.6 bits (83), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 24/39 (61%)
Query: 393 PSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFS 431
P+ + +SK V N QGK QG + +++ I+ PL+F+
Sbjct: 317 PALQGYLSKSVDDNAQGKLQGTLVSLTNITGIIGPLLFA 355
>sp|P33733|TCR4_SALOR Tetracycline resistance protein, class D OS=Salmonella ordonez
GN=tetA PE=3 SV=1
Length = 394
Score = 36.6 bits (83), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
Query: 69 PVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCL 128
P++G SD+ GR+ +L L L + +LA + Y + +T G+ +
Sbjct: 59 PLLGRWSDKLGRRPVLLLSLAGAAFDYTLLALSNVLWMLYLGRIISGIT-----GATGAV 113
Query: 129 ALAYVADNISERQRASAFGILLGVLSASFVCG 160
A + VAD+ + +R + FG L A + G
Sbjct: 114 AASVVADSTAVSERTAWFGRLGAAFGAGLIAG 145
>sp|Q9R1U7|S22A8_RAT Solute carrier family 22 member 8 OS=Rattus norvegicus GN=Slc22a8
PE=2 SV=1
Length = 536
Score = 35.8 bits (81), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 57 QAIIGLGTLVMMPVIGNLSDQYGRKAMLT 85
Q+I G LV PVIG LSD++GRK +LT
Sbjct: 126 QSIFMAGILVGGPVIGELSDRFGRKPILT 154
>sp|P33449|BMR1_BACSU Multidrug resistance protein 1 OS=Bacillus subtilis (strain 168)
GN=bmr PE=3 SV=2
Length = 389
Score = 35.4 bits (80), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 30/145 (20%), Positives = 62/145 (42%), Gaps = 12/145 (8%)
Query: 3 MEKEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGL 62
MEK+ TL+ L +F+ +V+P + ++E L+ G+ A +
Sbjct: 1 MEKKNITLTILLTNLFIAFLGIGLVIPVTPTI--------MNELHLSGTAVGYMVACFAI 52
Query: 63 GTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCE 122
L++ P+ G D++GRK M+ + L + + +++ + L ++A
Sbjct: 53 TQLIVSPIAGRWVDRFGRKIMIVIGLLFFSVSEFLFGIGKTVEMLFISRMLGGISAAFIM 112
Query: 123 GSINCLALAYVADNISERQRASAFG 147
+ A++AD + + R A G
Sbjct: 113 PGVT----AFIADITTIKTRPKALG 133
>sp|P57538|Y466_BUCAI Uncharacterized transporter BU466 OS=Buchnera aphidicola subsp.
Acyrthosiphon pisum (strain APS) GN=BU466 PE=3 SV=1
Length = 390
Score = 35.0 bits (79), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 76/185 (41%), Gaps = 20/185 (10%)
Query: 23 ATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKA 82
M++P ++ M L G ++ +L G I G+ ++ G LSD++ RK
Sbjct: 22 GMFMILPILSKYGM--LLDGGNK-----FLIGLSMGIYGISQVIFQIPFGILSDKFNRKK 74
Query: 83 MLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQR 142
++ L L + I I A SI + L G+I+ + +A+++D I E R
Sbjct: 75 IILLGLFMFFIGNIISASIHSI------WGLIIGRFFQGSGAISGVCMAFLSDLIREENR 128
Query: 143 ASAFGILLGVLSASF----VCGTLAARFLSTTSAFQAA---TIVSMLAAAYMRVFLKDDV 195
+ + + SF V G + + S F + +IV M+ + F K ++
Sbjct: 129 VKSIAAIGVSFAISFLIAVVSGPIIVHYFGFFSIFWISAFLSIVCMIIVCFFVPFSKKNI 188
Query: 196 PNDDD 200
+
Sbjct: 189 LKQNK 193
>sp|A2BWM0|ARGC_PROM5 N-acetyl-gamma-glutamyl-phosphate reductase OS=Prochlorococcus
marinus (strain MIT 9515) GN=argC PE=3 SV=1
Length = 351
Score = 34.7 bits (78), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 63/146 (43%), Gaps = 19/146 (13%)
Query: 174 QAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSP-VKIPVCKKI 232
Q I S AA Y R DDDDL + + E N++ S + + P C
Sbjct: 108 QWKRIYSNEAAKYKR----------DDDDLCKEAVYGLPEINNKDISKARLIACPGCYPT 157
Query: 233 PSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQAS-FLYF------LKAQFHFNKNQFA 285
++ LI L + ++ ++ SG S GG ++S L F L A N +
Sbjct: 158 SALIPLIPFLSQGIIDNEGIIIDSKSGTSGGGRESSQKLLFSECGDGLSAYGLINHRHTS 217
Query: 286 DLMLIAG-LAGTISQLLFMPLLAPIL 310
++ IA ++G +LLF P L P++
Sbjct: 218 EIEQIASFISGNDIELLFTPHLLPMI 243
>sp|Q7ZWG6|PCFT_DANRE Proton-coupled folate transporter OS=Danio rerio GN=slc46a1 PE=2
SV=1
Length = 481
Score = 34.3 bits (77), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 391 ATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPL--TALFLSKGAPFNF 446
+TP RS +SK V P EQG ++ + ++VS +F+ L L KG PF F
Sbjct: 391 STPVLRSKLSKLVDPAEQGALFASVACVEGLCSLVSSGVFNALYPATLHFMKGFPFVF 448
>sp|P47661|Y422_MYCGE Uncharacterized protein MG422 OS=Mycoplasma genitalium (strain ATCC
33530 / G-37 / NCTC 10195) GN=MG422 PE=4 SV=1
Length = 835
Score = 33.9 bits (76), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 10/98 (10%)
Query: 325 INMFICSISWSAWVIKI--FFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPY--- 379
IN F S+ +S W IK FFN K +L I K+I +LLLK +K + + P
Sbjct: 285 INSFTFSLIFSGWKIKWRSFFNFYRKRILEKKIVSKRIKTRILLLKEIKKMDLLSPKLLV 344
Query: 380 ATTAFSVLVV---FATPS--FRSIVSKQVGPNEQGKAQ 412
T S+ +V FA ++ I+S + GPN K Q
Sbjct: 345 ETIDESINLVNKIFANIQNLYQEIISLKSGPNLNWKYQ 382
>sp|O88909|S22A8_MOUSE Solute carrier family 22 member 8 OS=Mus musculus GN=Slc22a8 PE=2
SV=2
Length = 537
Score = 33.5 bits (75), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 57 QAIIGLGTLVMMPVIGNLSDQYGRKAMLT 85
Q++ G LV PV G LSD++GRK +LT
Sbjct: 126 QSVFMAGILVGGPVFGELSDRFGRKPILT 154
>sp|Q8CPR4|LTAA_STAES Probable glycolipid permease LtaA OS=Staphylococcus epidermidis
(strain ATCC 12228) GN=ltaA PE=3 SV=1
Length = 397
Score = 33.5 bits (75), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 9/37 (24%), Positives = 22/37 (59%)
Query: 393 PSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLI 429
P++ + ++ + PNEQ + G + + F +++ PL+
Sbjct: 319 PAWNTFMAGHINPNEQEETWGVFNSVQGFGSMIGPLV 355
>sp|Q5HQE8|LTAA_STAEQ Probable glycolipid permease LtaA OS=Staphylococcus epidermidis
(strain ATCC 35984 / RP62A) GN=ltaA PE=3 SV=1
Length = 397
Score = 33.5 bits (75), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 9/37 (24%), Positives = 22/37 (59%)
Query: 393 PSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLI 429
P++ + ++ + PNEQ + G + + F +++ PL+
Sbjct: 319 PAWNTFMAGHINPNEQEETWGVFNSVQGFGSMIGPLV 355
>sp|P37498|YYBF_BACSU Uncharacterized MFS-type transporter YybF OS=Bacillus subtilis
(strain 168) GN=yybF PE=3 SV=1
Length = 404
Score = 33.5 bits (75), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 63/125 (50%), Gaps = 12/125 (9%)
Query: 66 VMMPVIGNLSDQYGRKAMLTLP-LTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGS 124
V M V G+LS+ +GRK ++ + L S++ LA A+ S F+ LRT+ + G
Sbjct: 63 VSMLVFGSLSEVWGRKPIMGISMLAASVLCLAS-AFSPS---FHTLLVLRTIQGVALAG- 117
Query: 125 INCLALAYVADNISERQRASAFGIL-----LGVLSASFVCGTLAARFLSTTSAFQAATIV 179
+ +A+AY+ + I SA G+ +G + V G L + +L+ A ++
Sbjct: 118 LPSIAMAYLGEEIEPGSLGSAMGLYISGNAIGAVFGRIVSGLL-SEYLNWHMAMGTIGVI 176
Query: 180 SMLAA 184
S++A+
Sbjct: 177 SLIAS 181
>sp|F4IKF6|SPNS3_ARATH Probable sphingolipid transporter spinster homolog 3 OS=Arabidopsis
thaliana GN=At2g22730 PE=3 SV=1
Length = 510
Score = 33.1 bits (74), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 130/318 (40%), Gaps = 45/318 (14%)
Query: 40 CPGLDECSLA------IYLSGFQQAIIG----LGTLVMMPVIGNLSDQYGRKAMLTLPLT 89
C +C+LA LS F+ ++ +G L+ P+ +L+ + + +
Sbjct: 81 CNDKGKCTLATGIQGHFNLSNFEDGVLSSSFMVGLLIASPIFASLAKR-------LIGVG 133
Query: 90 LSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGIL 149
L++ +A+L S +F++ L + V E S LA ++ DN + Q+A+ G+
Sbjct: 134 LTVWTIAVLGCGSSFAFWFI--VLCRMFVGVGEASFISLAAPFIDDNAPQEQKAAWLGLF 191
Query: 150 LGVLSA----SFVCGTLAARFLSTTSAFQAATIVSMLAAAYMRVFLK-------DDVPND 198
+ + +V G + S AF ++ M A + +K + + N+
Sbjct: 192 YMCIPSGVALGYVYGGYVGKHFSWRYAFWGEAVL-MAPFAVLGFLMKPLQLKGSETLKNN 250
Query: 199 DDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSI-RDLICLLRSSVTLSQAAVVAFF 257
+ + I ++ E V+ S S V K +D+ L + V VV
Sbjct: 251 NRLQVDNEIEHDQFE-VSIETSKSSYANAVFKSFTGFAKDMKVLYKEKVF-----VVNVL 304
Query: 258 SGLSEGGMQASFLYF-LKAQFHFNKNQFADLM-----LIAGLAGTISQLLFMPLLAPILG 311
+S + ++ Y+ KA ++ K + AD++ +I G+ GT+S + + +
Sbjct: 305 GYVSYNFVIGAYSYWGPKAGYNIYKMKNADMIFGAVTIICGIVGTLSGGFILDRVTATIP 364
Query: 312 EA-KLLSLGLFAACINMF 328
A KLLS F + F
Sbjct: 365 NAFKLLSGATFLGAVFCF 382
>sp|Q6GBD5|NORA_STAAS Quinolone resistance protein NorA OS=Staphylococcus aureus (strain
MSSA476) GN=norA PE=3 SV=1
Length = 388
Score = 32.7 bits (73), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 74/169 (43%), Gaps = 15/169 (8%)
Query: 3 MEKEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGL 62
M K+I L + +FL +V+P + V + L GL L + ++ F L
Sbjct: 1 MNKQIFVL---YFNIFLIFLGIGLVIP-VLPVYLKDL--GLTGSDLGLLVAAFA-----L 49
Query: 63 GTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCE 122
+++ P G L+D+ G+K ++ + L L ++ + ++ ++ L + +
Sbjct: 50 SQMIISPFGGTLADKLGKKLIICIGLIL----FSVSEFMFAVGHNFSVLMLSRVIGGMSA 105
Query: 123 GSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLSTTS 171
G + +AD Q+A FG + ++++ F+ G F++ S
Sbjct: 106 GMVMPGVTGLIADISPSHQKAKNFGYMSAIINSGFILGPGIGGFMAEVS 154
>sp|Q6GIU7|NORA_STAAR Quinolone resistance protein NorA OS=Staphylococcus aureus (strain
MRSA252) GN=norA PE=3 SV=1
Length = 388
Score = 32.7 bits (73), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 74/169 (43%), Gaps = 15/169 (8%)
Query: 3 MEKEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGL 62
M K+I L + +FL +V+P + V + L GL L + ++ F L
Sbjct: 1 MNKQIFVL---YFNIFLIFLGIGLVIP-VLPVYLKDL--GLTGSDLGLLVAAFA-----L 49
Query: 63 GTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCE 122
+++ P G L+D+ G+K ++ + L L ++ + ++ ++ L + +
Sbjct: 50 SQMIISPFGGTLADKLGKKLIICIGLIL----FSVSEFMFAVGHNFSVLMLSRVIGGMSA 105
Query: 123 GSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLSTTS 171
G + +AD Q+A FG + ++++ F+ G F++ S
Sbjct: 106 GMVMPGVTGLIADVSPSHQKAKNFGYMSAIINSGFILGPGIGGFMAEVS 154
>sp|Q5HHX4|NORA_STAAC Quinolone resistance protein NorA OS=Staphylococcus aureus (strain
COL) GN=norA PE=3 SV=1
Length = 388
Score = 32.7 bits (73), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 74/169 (43%), Gaps = 15/169 (8%)
Query: 3 MEKEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGL 62
M K+I L + +FL +V+P + V + L GL L + ++ F L
Sbjct: 1 MNKQIFVL---YFNIFLIFLGIGLVIP-VLPVYLKDL--GLTGSDLGLLVAAFA-----L 49
Query: 63 GTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCE 122
+++ P G L+D+ G+K ++ + L L ++ + ++ ++ L + +
Sbjct: 50 SQMIISPFGGTLADKLGKKLIICIGLIL----FSVSEFMFAVGHNFSVLMLSRVIGGMSA 105
Query: 123 GSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLSTTS 171
G + +AD Q+A FG + ++++ F+ G F++ S
Sbjct: 106 GMVMPGVTGLIADISPSHQKAKNFGYMSAIINSGFILGPGIGGFMAEVS 154
>sp|P0A0J6|NORA_STAAW Quinolone resistance protein NorA OS=Staphylococcus aureus (strain
MW2) GN=norA PE=3 SV=1
Length = 388
Score = 32.7 bits (73), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 74/169 (43%), Gaps = 15/169 (8%)
Query: 3 MEKEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGL 62
M K+I L + +FL +V+P + V + L GL L + ++ F L
Sbjct: 1 MNKQIFVL---YFNIFLIFLGIGLVIP-VLPVYLKDL--GLTGSDLGLLVAAFA-----L 49
Query: 63 GTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCE 122
+++ P G L+D+ G+K ++ + L L ++ + ++ ++ L + +
Sbjct: 50 SQMIISPFGGTLADKLGKKLIICIGLIL----FSVSEFMFAVGHNFSVLMLSRVIGGMSA 105
Query: 123 GSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLSTTS 171
G + +AD Q+A FG + ++++ F+ G F++ S
Sbjct: 106 GMVMPGVTGLIADISPSHQKAKNFGYMSAIINSGFILGPGIGGFMAEVS 154
>sp|P0A0J7|NORA_STAAU Quinolone resistance protein NorA OS=Staphylococcus aureus GN=norA
PE=3 SV=1
Length = 388
Score = 32.7 bits (73), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 74/169 (43%), Gaps = 15/169 (8%)
Query: 3 MEKEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGL 62
M K+I L + +FL +V+P + V + L GL L + ++ F L
Sbjct: 1 MNKQIFVL---YFNIFLIFLGIGLVIP-VLPVYLKDL--GLTGSDLGLLVAAFA-----L 49
Query: 63 GTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCE 122
+++ P G L+D+ G+K ++ + L L ++ + ++ ++ L + +
Sbjct: 50 SQMIISPFGGTLADKLGKKLIICIGLIL----FSVSEFMFAVGHNFSVLMLSRVIGGMSA 105
Query: 123 GSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLSTTS 171
G + +AD Q+A FG + ++++ F+ G F++ S
Sbjct: 106 GMVMPGVTGLIADISPSHQKAKNFGYMSAIINSGFILGPGIGGFMAEVS 154
>sp|P0A0J5|NORA_STAAN Quinolone resistance protein NorA OS=Staphylococcus aureus (strain
N315) GN=norA PE=3 SV=1
Length = 388
Score = 32.7 bits (73), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 74/169 (43%), Gaps = 15/169 (8%)
Query: 3 MEKEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGL 62
M K+I L + +FL +V+P + V + L GL L + ++ F L
Sbjct: 1 MNKQIFVL---YFNIFLIFLGIGLVIP-VLPVYLKDL--GLTGSDLGLLVAAFA-----L 49
Query: 63 GTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCE 122
+++ P G L+D+ G+K ++ + L L ++ + ++ ++ L + +
Sbjct: 50 SQMIISPFGGTLADKLGKKLIICIGLIL----FSVSEFMFAVGHNFSVLMLSRVIGGMSA 105
Query: 123 GSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLSTTS 171
G + +AD Q+A FG + ++++ F+ G F++ S
Sbjct: 106 GMVMPGVTGLIADISPSHQKAKNFGYMSAIINSGFILGPGIGGFMAEVS 154
>sp|P0A0J4|NORA_STAAM Quinolone resistance protein NorA OS=Staphylococcus aureus (strain
Mu50 / ATCC 700699) GN=norA PE=3 SV=1
Length = 388
Score = 32.7 bits (73), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 74/169 (43%), Gaps = 15/169 (8%)
Query: 3 MEKEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGL 62
M K+I L + +FL +V+P + V + L GL L + ++ F L
Sbjct: 1 MNKQIFVL---YFNIFLIFLGIGLVIP-VLPVYLKDL--GLTGSDLGLLVAAFA-----L 49
Query: 63 GTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCE 122
+++ P G L+D+ G+K ++ + L L ++ + ++ ++ L + +
Sbjct: 50 SQMIISPFGGTLADKLGKKLIICIGLIL----FSVSEFMFAVGHNFSVLMLSRVIGGMSA 105
Query: 123 GSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLSTTS 171
G + +AD Q+A FG + ++++ F+ G F++ S
Sbjct: 106 GMVMPGVTGLIADISPSHQKAKNFGYMSAIINSGFILGPGIGGFMAEVS 154
>sp|A6QLW8|S22A7_BOVIN Solute carrier family 22 member 7 OS=Bos taurus GN=SLC22A7 PE=2
SV=1
Length = 547
Score = 32.3 bits (72), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 52/120 (43%), Gaps = 14/120 (11%)
Query: 45 ECSLAIYLSGFQQAIIGL---GTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYR 101
E L G +AI G LV V G LSD++GR+ +L + S+ L
Sbjct: 132 EWDLVCEQKGLNKAISTFFFAGVLVGAEVYGYLSDRFGRRRLLLVAYVSSL----ALGLA 187
Query: 102 RSISFFYAYYAL-RTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCG 160
+ S Y +A+ RTLT M G + + + + R R A GVLS++F G
Sbjct: 188 SAASVSYIMFAITRTLTGMALAG-FTIIVMPLELEWLDVRHRTVA-----GVLSSTFWTG 241
>sp|Q921Y4|MFSD5_MOUSE Major facilitator superfamily domain-containing protein 5 OS=Mus
musculus GN=Mfsd5 PE=2 SV=1
Length = 450
Score = 32.3 bits (72), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 256 FFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAK- 314
+F L+ +QA +LY L +HF + Q A ++ + GLA T+ L L LG K
Sbjct: 49 YFLALAADWLQAPYLYKLYQHYHFLEGQIA-ILYVCGLASTVLFGLVASSLVDWLGRKKS 107
Query: 315 --LLSLGLFAACIN 326
L SL CI
Sbjct: 108 CVLFSLTYSLCCIT 121
>sp|P46499|YLX3_CAEEL Uncharacterized protein F23F12.3 OS=Caenorhabditis elegans
GN=F23F12.3/F23F12.1 PE=3 SV=3
Length = 522
Score = 32.3 bits (72), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 10/100 (10%)
Query: 46 CSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSIS 105
C Y S + I +G LV V G+L D +GRK + + +++ II + S
Sbjct: 89 CGTKAYDSAWIATIQFIGALVGALVYGHLGDHFGRKPVSFVGISIGIIFGVASGFAPSWE 148
Query: 106 FFYAYYALRTLTAMVCEGSINCLAL---AYVADNISERQR 142
F + +C S+ C+ + AY+ + I QR
Sbjct: 149 VF-------AVLLFICGTSVACIMIVFYAYILEFIEPEQR 181
>sp|D2BX50|MDTG_DICD5 Multidrug resistance protein MdtG OS=Dickeya dadantii (strain
Ech586) GN=mdtG PE=3 SV=1
Length = 408
Score = 32.3 bits (72), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Query: 13 LFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIG 72
LFVT + AT V P +T + + L D + ++SG AI G+ L+ P +G
Sbjct: 221 LFVTTLIIQVATGSVAPILT-LYVRELAGQTDNLA---FISGAIAAIPGVSALLSAPRLG 276
Query: 73 NLSDQYGRKAMLTLPLTLSIIPLAILAYRRS 103
L D+ G + +L L LS++ L +A+ +S
Sbjct: 277 KLGDKIGPERILVAMLILSVLLLIPMAFVQS 307
>sp|O31563|YFIU_BACSU Uncharacterized MFS-type transporter YfiU OS=Bacillus subtilis
(strain 168) GN=yfiU PE=3 SV=1
Length = 518
Score = 32.0 bits (71), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 62 LGTLVMMPVIGNLSDQYGRKAMLTLPLTL 90
LG V +P++G LSD+YGRK + + + L
Sbjct: 59 LGLSVSVPIVGKLSDRYGRKKLFLIEVCL 87
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.328 0.138 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 153,960,013
Number of Sequences: 539616
Number of extensions: 5894408
Number of successful extensions: 19857
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 100
Number of HSP's that attempted gapping in prelim test: 19734
Number of HSP's gapped (non-prelim): 204
length of query: 484
length of database: 191,569,459
effective HSP length: 121
effective length of query: 363
effective length of database: 126,275,923
effective search space: 45838160049
effective search space used: 45838160049
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 63 (28.9 bits)