Query 011514
Match_columns 484
No_of_seqs 485 out of 1342
Neff 10.4
Searched_HMMs 46136
Date Fri Mar 29 02:12:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011514.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011514hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2814 AraJ Arabinose efflux 100.0 1.8E-35 3.9E-40 277.4 42.3 373 7-471 12-388 (394)
2 PRK03545 putative arabinose tr 100.0 8.9E-35 1.9E-39 285.6 42.4 366 10-470 11-381 (390)
3 PRK11551 putative 3-hydroxyphe 100.0 5.2E-34 1.1E-38 282.0 39.9 351 10-437 17-371 (406)
4 PRK11663 regulatory protein Uh 100.0 1.7E-33 3.7E-38 279.9 39.7 393 11-472 26-427 (434)
5 TIGR02332 HpaX 4-hydroxyphenyl 100.0 8.1E-34 1.7E-38 280.0 34.6 382 7-442 7-401 (412)
6 TIGR00900 2A0121 H+ Antiporter 100.0 1.6E-33 3.5E-38 274.2 36.1 351 12-437 3-364 (365)
7 PRK03633 putative MFS family t 100.0 1.3E-32 2.7E-37 269.4 40.9 369 3-469 1-372 (381)
8 PRK11646 multidrug resistance 100.0 1.1E-32 2.4E-37 270.8 40.3 371 11-467 13-386 (400)
9 PRK10489 enterobactin exporter 100.0 6.8E-33 1.5E-37 274.7 38.8 354 7-441 16-378 (417)
10 COG2271 UhpC Sugar phosphate p 100.0 1.2E-33 2.6E-38 261.1 30.5 370 7-437 24-410 (448)
11 PRK09705 cynX putative cyanate 100.0 1E-32 2.2E-37 270.8 38.8 353 25-472 26-384 (393)
12 PRK09556 uhpT sugar phosphate 100.0 1.7E-33 3.6E-38 282.7 33.9 361 14-435 35-411 (467)
13 PRK10642 proline/glycine betai 100.0 2.5E-32 5.5E-37 275.5 42.6 370 7-437 15-405 (490)
14 PRK09874 drug efflux system pr 100.0 2.1E-32 4.6E-37 270.7 41.0 379 5-468 11-397 (408)
15 PRK14995 methyl viologen resis 100.0 1.3E-32 2.9E-37 277.7 38.0 380 4-436 2-413 (495)
16 TIGR00893 2A0114 d-galactonate 100.0 4.6E-33 1E-37 273.9 33.5 378 19-464 5-394 (399)
17 PRK05122 major facilitator sup 100.0 2.8E-32 6.1E-37 268.9 38.5 372 5-472 12-392 (399)
18 TIGR01299 synapt_SV2 synaptic 100.0 1E-32 2.2E-37 283.7 36.6 398 12-470 171-735 (742)
19 PRK10213 nepI ribonucleoside t 100.0 1.3E-31 2.9E-36 262.6 42.8 335 20-442 32-371 (394)
20 PRK11195 lysophospholipid tran 100.0 6.8E-32 1.5E-36 264.6 37.9 373 8-468 3-379 (393)
21 TIGR00903 2A0129 major facilit 100.0 5.8E-32 1.3E-36 261.5 36.7 352 20-466 3-362 (368)
22 TIGR00891 2A0112 putative sial 100.0 2.6E-32 5.6E-37 269.7 34.9 376 7-441 11-395 (405)
23 PRK10091 MFS transport protein 100.0 2E-31 4.4E-36 260.9 40.7 349 7-442 2-356 (382)
24 PRK09952 shikimate transporter 100.0 3E-31 6.6E-36 263.8 42.2 392 7-470 21-434 (438)
25 TIGR00899 2A0120 sugar efflux 100.0 1.3E-31 2.8E-36 262.0 38.9 364 14-468 3-373 (375)
26 PRK10406 alpha-ketoglutarate t 100.0 3.7E-31 8E-36 263.2 42.5 379 10-470 24-425 (432)
27 PRK15402 multidrug efflux syst 100.0 2.1E-31 4.5E-36 263.2 40.2 345 14-437 19-371 (406)
28 PRK10054 putative transporter; 100.0 8E-32 1.7E-36 264.3 36.4 358 1-442 1-364 (395)
29 PRK12307 putative sialic acid 100.0 7E-32 1.5E-36 268.5 36.1 359 7-437 17-384 (426)
30 PRK03699 putative transporter; 100.0 3.7E-31 8.1E-36 260.1 39.6 352 5-442 4-360 (394)
31 PRK11273 glpT sn-glycerol-3-ph 100.0 5.7E-31 1.2E-35 263.2 41.1 361 47-466 59-432 (452)
32 PRK10504 putative transporter; 100.0 8.7E-31 1.9E-35 263.9 41.7 379 7-437 9-416 (471)
33 PF05977 MFS_3: Transmembrane 100.0 6.6E-31 1.4E-35 261.9 39.9 378 6-466 8-391 (524)
34 TIGR00890 2A0111 Oxalate/Forma 100.0 2.3E-31 5E-36 260.1 35.7 351 24-460 19-373 (377)
35 PRK12382 putative transporter; 100.0 5.9E-31 1.3E-35 258.8 38.5 366 6-467 13-387 (392)
36 TIGR00897 2A0118 polyol permea 100.0 1.7E-30 3.6E-35 256.1 41.7 376 6-469 11-401 (402)
37 PF07690 MFS_1: Major Facilita 100.0 3.9E-32 8.5E-37 263.1 28.9 343 13-427 1-352 (352)
38 PRK15075 citrate-proton sympor 100.0 1.3E-30 2.9E-35 259.3 40.6 362 5-437 12-395 (434)
39 TIGR00711 efflux_EmrB drug res 100.0 2.3E-31 4.9E-36 269.5 35.6 375 9-436 3-410 (485)
40 TIGR00710 efflux_Bcr_CflA drug 100.0 1.9E-30 4E-35 254.7 40.6 351 6-432 3-357 (385)
41 TIGR00887 2A0109 phosphate:H+ 100.0 3.3E-31 7.2E-36 268.4 36.2 387 9-436 17-454 (502)
42 PRK10077 xylE D-xylose transpo 100.0 8.8E-32 1.9E-36 271.9 31.4 380 9-434 13-424 (479)
43 TIGR00881 2A0104 phosphoglycer 100.0 1.6E-31 3.5E-36 261.4 30.7 366 17-442 4-377 (379)
44 TIGR00879 SP MFS transporter, 100.0 2.1E-31 4.6E-36 269.0 30.7 414 16-472 36-473 (481)
45 PRK11652 emrD multidrug resist 100.0 8E-30 1.7E-34 250.9 40.8 352 1-435 1-359 (394)
46 TIGR00895 2A0115 benzoate tran 100.0 5.9E-31 1.3E-35 259.3 32.7 370 11-433 20-397 (398)
47 PRK10473 multidrug efflux syst 100.0 1.4E-29 2.9E-34 249.1 42.2 346 8-440 3-352 (392)
48 PRK15403 multidrug efflux syst 100.0 6.8E-30 1.5E-34 252.0 39.7 343 15-436 23-373 (413)
49 PRK10133 L-fucose transporter; 100.0 1.1E-29 2.3E-34 251.9 41.2 347 9-437 27-408 (438)
50 PRK15011 sugar efflux transpor 100.0 1.5E-29 3.2E-34 248.6 41.2 373 5-469 12-391 (393)
51 PLN00028 nitrate transmembrane 100.0 5E-30 1.1E-34 257.4 37.8 377 8-468 36-432 (476)
52 COG2223 NarK Nitrate/nitrite t 100.0 1.8E-30 3.9E-35 240.6 31.0 380 6-467 12-399 (417)
53 TIGR00712 glpT glycerol-3-phos 100.0 7.9E-30 1.7E-34 254.1 37.0 365 47-470 57-434 (438)
54 TIGR00902 2A0127 phenyl propri 100.0 1.8E-29 3.9E-34 247.0 38.6 364 10-466 6-376 (382)
55 TIGR00892 2A0113 monocarboxyla 100.0 9E-30 1.9E-34 254.2 33.2 359 27-448 38-407 (455)
56 cd06174 MFS The Major Facilita 100.0 4.4E-29 9.6E-34 241.4 37.1 341 12-465 3-348 (352)
57 PRK03893 putative sialic acid 100.0 2.7E-29 5.9E-34 254.9 36.6 370 7-441 19-432 (496)
58 TIGR00898 2A0119 cation transp 100.0 3.8E-30 8.3E-35 261.6 30.2 366 45-472 118-498 (505)
59 TIGR00885 fucP L-fucose:H+ sym 100.0 1.4E-28 3.1E-33 241.8 40.0 348 9-437 4-382 (410)
60 TIGR00894 2A0114euk Na(+)-depe 100.0 3.9E-30 8.5E-35 258.6 29.4 363 45-469 70-450 (465)
61 PRK11043 putative transporter; 100.0 4E-28 8.6E-33 239.5 42.1 342 9-436 7-357 (401)
62 PRK11102 bicyclomycin/multidru 100.0 1.2E-28 2.6E-33 241.2 38.0 331 21-430 4-343 (377)
63 KOG2615 Permease of the major 100.0 1.9E-30 4.2E-35 235.3 22.8 360 25-442 42-420 (451)
64 PRK11010 ampG muropeptide tran 100.0 5.6E-28 1.2E-32 243.0 42.5 378 8-470 12-404 (491)
65 PRK09528 lacY galactoside perm 100.0 1E-28 2.2E-33 245.1 34.0 380 7-466 9-400 (420)
66 PRK15034 nitrate/nitrite trans 100.0 1E-27 2.2E-32 233.4 40.0 371 7-467 33-452 (462)
67 TIGR00883 2A0106 metabolite-pr 100.0 1.3E-28 2.9E-33 242.1 34.2 350 18-437 3-376 (394)
68 TIGR00889 2A0110 nucleoside tr 100.0 4.1E-28 9E-33 239.4 37.6 379 12-472 6-406 (418)
69 PRK06814 acylglycerophosphoeth 100.0 2.1E-28 4.6E-33 271.7 37.4 378 7-436 10-396 (1140)
70 PRK11128 putative 3-phenylprop 100.0 1.1E-27 2.4E-32 234.4 37.8 336 16-437 12-356 (382)
71 PRK11902 ampG muropeptide tran 100.0 3.8E-27 8.3E-32 232.3 41.5 368 14-471 5-392 (402)
72 TIGR00896 CynX cyanate transpo 100.0 3.6E-28 7.7E-33 235.8 33.4 332 23-442 15-354 (355)
73 KOG0569 Permease of the major 100.0 1.6E-27 3.5E-32 230.7 36.3 384 43-473 53-458 (485)
74 TIGR00886 2A0108 nitrite extru 100.0 4.3E-28 9.3E-33 236.3 32.3 344 9-422 2-365 (366)
75 PRK08633 2-acyl-glycerophospho 100.0 1.8E-27 3.8E-32 265.3 39.0 360 6-435 7-383 (1146)
76 TIGR00882 2A0105 oligosacchari 100.0 4E-27 8.7E-32 231.8 36.7 375 8-462 2-388 (396)
77 TIGR00901 2A0125 AmpG-related 100.0 3.2E-27 6.9E-32 229.2 33.0 319 24-420 4-355 (356)
78 KOG2532 Permease of the major 100.0 4.6E-28 9.9E-33 237.5 25.5 366 44-468 66-446 (466)
79 TIGR00792 gph sugar (Glycoside 100.0 1.9E-26 4.1E-31 230.3 33.5 348 18-441 9-384 (437)
80 COG0738 FucP Fucose permease [ 100.0 3.6E-25 7.7E-30 204.1 35.4 349 8-437 13-385 (422)
81 TIGR02718 sider_RhtX_FptX side 100.0 1.1E-24 2.5E-29 213.9 41.3 373 10-463 3-385 (390)
82 KOG1330 Sugar transporter/spin 100.0 5.8E-28 1.3E-32 225.6 15.7 368 4-441 29-417 (493)
83 TIGR00924 yjdL_sub1_fam amino 100.0 4.1E-25 8.9E-30 221.1 36.6 391 5-436 7-443 (475)
84 KOG3764 Vesicular amine transp 99.9 1.6E-27 3.5E-32 217.7 14.1 355 11-442 24-434 (464)
85 PRK10207 dipeptide/tripeptide 99.9 2.8E-24 6E-29 215.2 35.8 386 1-433 7-438 (489)
86 PF03825 Nuc_H_symport: Nucleo 99.9 9.3E-24 2E-28 204.9 37.7 354 13-444 7-371 (400)
87 TIGR01301 GPH_sucrose GPH fami 99.9 3E-23 6.5E-28 203.6 41.0 415 9-473 5-475 (477)
88 KOG0252 Inorganic phosphate tr 99.9 4.4E-26 9.5E-31 212.0 17.4 422 11-471 44-500 (538)
89 PF11700 ATG22: Vacuole efflux 99.9 7.4E-23 1.6E-27 202.3 39.7 354 50-472 69-471 (477)
90 KOG0254 Predicted transporter 99.9 4.6E-24 1E-28 216.3 28.5 352 51-436 89-457 (513)
91 PF01306 LacY_symp: LacY proto 99.9 1.4E-22 3E-27 192.8 35.9 386 5-470 4-401 (412)
92 KOG2504 Monocarboxylate transp 99.9 1.2E-23 2.5E-28 209.1 28.6 363 51-458 81-472 (509)
93 KOG2533 Permease of the major 99.9 7E-24 1.5E-28 208.4 26.2 276 44-333 74-364 (495)
94 PRK10429 melibiose:sodium symp 99.9 2.2E-22 4.8E-27 202.2 35.6 355 13-441 11-397 (473)
95 PF00083 Sugar_tr: Sugar (and 99.9 4.9E-29 1.1E-33 249.9 -14.0 410 15-474 7-441 (451)
96 COG2807 CynX Cyanate permease 99.9 1.1E-21 2.3E-26 178.5 34.9 344 11-442 11-365 (395)
97 PRK09669 putative symporter Ya 99.9 1E-21 2.2E-26 196.1 36.0 347 16-441 17-392 (444)
98 COG2270 Permeases of the major 99.9 1.6E-22 3.5E-27 187.9 27.3 376 26-471 33-431 (438)
99 PRK09584 tppB putative tripept 99.9 1.6E-21 3.4E-26 196.5 36.2 380 7-430 20-438 (500)
100 PRK09848 glucuronide transport 99.9 1.8E-21 3.9E-26 194.7 35.6 354 11-441 11-392 (448)
101 TIGR00805 oat sodium-independe 99.9 2.6E-23 5.6E-28 213.9 22.4 298 16-329 41-415 (633)
102 KOG0255 Synaptic vesicle trans 99.9 3.8E-22 8.2E-27 203.4 30.7 338 48-435 115-467 (521)
103 KOG0253 Synaptic vesicle trans 99.9 6.8E-22 1.5E-26 178.7 27.4 371 47-475 109-525 (528)
104 TIGR00806 rfc RFC reduced fola 99.9 2.7E-21 5.8E-26 184.8 30.8 404 3-463 22-442 (511)
105 KOG2816 Predicted transporter 99.9 1.8E-21 4E-26 190.1 30.2 374 10-444 20-400 (463)
106 PF13347 MFS_2: MFS/sugar tran 99.9 2.1E-21 4.6E-26 192.9 29.9 326 47-442 33-389 (428)
107 PF06609 TRI12: Fungal trichot 99.9 1.3E-20 2.7E-25 187.6 34.1 362 23-436 59-467 (599)
108 TIGR00788 fbt folate/biopterin 99.9 2E-20 4.3E-25 186.9 29.5 373 11-438 29-415 (468)
109 COG2211 MelB Na+/melibiose sym 99.9 3.6E-19 7.7E-24 171.2 34.1 358 13-442 17-401 (467)
110 TIGR01272 gluP glucose/galacto 99.9 1.3E-19 2.8E-24 171.1 29.5 263 107-442 10-295 (310)
111 PRK11462 putative transporter; 99.9 1.2E-18 2.5E-23 174.1 37.6 349 15-441 16-391 (460)
112 PRK15462 dipeptide/tripeptide 99.9 1.8E-18 4E-23 170.7 35.0 384 6-431 7-435 (493)
113 PTZ00207 hypothetical protein; 99.9 4.5E-18 9.8E-23 170.6 37.0 373 47-466 58-549 (591)
114 PF03209 PUCC: PUCC protein; 99.8 3.5E-17 7.5E-22 153.2 37.8 357 46-469 10-398 (403)
115 KOG2325 Predicted transporter/ 99.8 1.3E-19 2.9E-24 174.4 20.8 396 6-442 32-455 (488)
116 KOG4686 Predicted sugar transp 99.8 6.8E-20 1.5E-24 160.1 12.8 353 47-472 75-446 (459)
117 COG3104 PTR2 Dipeptide/tripept 99.7 1.3E-14 2.8E-19 138.7 27.9 384 6-431 19-451 (498)
118 KOG2563 Permease of the major 99.7 3.5E-14 7.7E-19 133.3 25.1 342 27-437 63-422 (480)
119 PF03137 OATP: Organic Anion T 99.6 2.4E-17 5.3E-22 165.4 -0.1 407 13-437 8-515 (539)
120 PF03092 BT1: BT1 family; Int 99.6 8.7E-13 1.9E-17 130.3 27.7 379 47-473 21-417 (433)
121 PRK10054 putative transporter; 99.6 1.8E-13 3.8E-18 134.5 20.6 171 245-463 6-176 (395)
122 PF05631 DUF791: Protein of un 99.5 6E-12 1.3E-16 116.4 26.3 274 14-329 40-325 (354)
123 TIGR00889 2A0110 nucleoside tr 99.5 5.6E-13 1.2E-17 131.8 19.5 184 12-199 212-410 (418)
124 TIGR00880 2_A_01_02 Multidrug 99.5 1.1E-13 2.3E-18 114.7 10.7 133 57-193 4-140 (141)
125 PRK10642 proline/glycine betai 99.5 1.2E-12 2.6E-17 132.4 20.4 169 19-199 261-437 (490)
126 KOG3626 Organic anion transpor 99.5 9E-13 1.9E-17 132.7 18.5 276 47-329 128-477 (735)
127 TIGR00924 yjdL_sub1_fam amino 99.5 9.4E-13 2E-17 132.2 18.4 173 245-464 9-187 (475)
128 TIGR01299 synapt_SV2 synaptic 99.5 1.7E-12 3.6E-17 134.8 20.4 139 53-196 597-738 (742)
129 PF07690 MFS_1: Major Facilita 99.5 2.5E-12 5.4E-17 124.4 19.0 165 253-464 3-167 (352)
130 PRK11646 multidrug resistance 99.5 2.8E-12 6.1E-17 126.2 19.6 148 249-435 13-160 (400)
131 TIGR00900 2A0121 H+ Antiporter 99.5 3E-12 6.5E-17 124.4 18.3 151 251-442 4-159 (365)
132 PF01770 Folate_carrier: Reduc 99.5 6.9E-10 1.5E-14 105.8 33.0 370 5-426 2-392 (412)
133 PRK15462 dipeptide/tripeptide 99.5 4.3E-12 9.3E-17 125.7 18.7 175 244-465 7-185 (493)
134 PRK10489 enterobactin exporter 99.4 3.5E-12 7.7E-17 126.5 17.3 184 239-470 10-198 (417)
135 PRK09874 drug efflux system pr 99.4 8.6E-12 1.9E-16 123.4 19.7 170 18-195 229-402 (408)
136 PF06963 FPN1: Ferroportin1 (F 99.4 9.1E-10 2E-14 106.9 32.9 376 8-428 2-410 (432)
137 TIGR00710 efflux_Bcr_CflA drug 99.4 6.4E-12 1.4E-16 123.2 18.5 166 254-467 13-178 (385)
138 PRK10207 dipeptide/tripeptide 99.4 8.4E-12 1.8E-16 125.4 18.7 160 244-442 12-174 (489)
139 PRK12382 putative transporter; 99.4 1E-11 2.2E-16 122.2 18.8 153 246-437 15-175 (392)
140 PRK11663 regulatory protein Uh 99.4 1.2E-11 2.6E-16 123.3 19.4 154 248-442 25-178 (434)
141 PRK03545 putative arabinose tr 99.4 1.2E-11 2.7E-16 121.5 19.2 151 267-465 30-180 (390)
142 PRK05122 major facilitator sup 99.4 5.8E-12 1.3E-16 124.3 16.8 160 245-437 14-175 (399)
143 COG2814 AraJ Arabinose efflux 99.4 2.3E-11 5.1E-16 115.2 19.6 177 246-470 13-189 (394)
144 PRK09528 lacY galactoside perm 99.4 3.6E-12 7.7E-17 126.6 14.9 161 29-197 244-409 (420)
145 PRK10504 putative transporter; 99.4 1.4E-11 3E-16 124.3 19.3 156 246-442 10-165 (471)
146 PRK10213 nepI ribonucleoside t 99.4 2E-11 4.4E-16 119.9 19.8 138 264-442 38-175 (394)
147 PRK10091 MFS transport protein 99.4 2E-11 4.4E-16 119.6 18.8 169 246-462 3-171 (382)
148 TIGR02332 HpaX 4-hydroxyphenyl 99.4 3.5E-11 7.6E-16 119.0 20.2 134 263-436 25-158 (412)
149 PRK03633 putative MFS family t 99.4 3.2E-11 6.8E-16 118.2 19.2 152 245-436 5-156 (381)
150 PRK11195 lysophospholipid tran 99.4 2.6E-11 5.6E-16 119.1 18.5 149 245-436 2-150 (393)
151 TIGR00886 2A0108 nitrite extru 99.4 4.3E-11 9.3E-16 116.6 19.8 149 248-436 3-152 (366)
152 PRK09584 tppB putative tripept 99.4 3.4E-11 7.3E-16 121.7 19.4 160 244-442 19-181 (500)
153 TIGR00891 2A0112 putative sial 99.4 2.9E-11 6.2E-16 119.4 18.6 150 248-437 14-163 (405)
154 PRK11043 putative transporter; 99.4 4.3E-11 9.3E-16 118.1 19.6 164 261-471 18-183 (401)
155 PRK14995 methyl viologen resis 99.4 3.8E-11 8.2E-16 121.7 19.5 171 248-466 8-179 (495)
156 PRK15011 sugar efflux transpor 99.4 5.2E-11 1.1E-15 117.1 20.0 163 18-193 226-392 (393)
157 PRK11551 putative 3-hydroxyphe 99.4 4.2E-11 9.1E-16 118.4 19.2 160 18-189 230-394 (406)
158 PRK10473 multidrug efflux syst 99.4 5.5E-11 1.2E-15 117.0 19.9 152 246-437 3-154 (392)
159 TIGR00711 efflux_EmrB drug res 99.4 3.2E-11 6.9E-16 122.3 18.5 153 249-442 5-157 (485)
160 PRK03699 putative transporter; 99.4 5.3E-11 1.1E-15 117.2 19.5 156 247-442 8-163 (394)
161 cd06174 MFS The Major Facilita 99.3 5.1E-11 1.1E-15 114.9 17.6 168 9-187 176-348 (352)
162 TIGR00899 2A0120 sugar efflux 99.3 8E-11 1.7E-15 115.0 18.9 169 252-467 3-174 (375)
163 TIGR00890 2A0111 Oxalate/Forma 99.3 3.9E-11 8.4E-16 117.1 16.1 164 10-183 207-374 (377)
164 PRK11102 bicyclomycin/multidru 99.3 6.1E-11 1.3E-15 116.0 17.4 139 263-442 8-146 (377)
165 TIGR00893 2A0114 d-galactonate 99.3 4.1E-11 8.9E-16 117.6 16.1 151 266-464 14-164 (399)
166 COG2271 UhpC Sugar phosphate p 99.3 3E-11 6.5E-16 113.1 14.0 177 248-472 31-210 (448)
167 TIGR00892 2A0113 monocarboxyla 99.3 2.6E-11 5.6E-16 121.5 14.3 165 9-185 242-415 (455)
168 TIGR00897 2A0118 polyol permea 99.3 1.7E-10 3.7E-15 113.8 19.7 153 245-437 12-169 (402)
169 PRK15402 multidrug efflux syst 99.3 1.9E-10 4.2E-15 113.7 20.1 157 261-465 28-184 (406)
170 TIGR00895 2A0115 benzoate tran 99.3 9.4E-11 2E-15 115.3 17.4 140 262-442 33-172 (398)
171 PLN00028 nitrate transmembrane 99.3 3.3E-10 7.2E-15 114.1 21.4 131 265-436 55-185 (476)
172 TIGR00902 2A0127 phenyl propri 99.3 2.1E-10 4.5E-15 112.4 19.4 166 7-186 204-374 (382)
173 PRK15034 nitrate/nitrite trans 99.3 6.1E-10 1.3E-14 109.3 22.1 148 246-433 34-186 (462)
174 PRK11652 emrD multidrug resist 99.3 2.5E-10 5.4E-15 112.4 18.6 151 251-442 13-163 (394)
175 PRK15403 multidrug efflux syst 99.3 3.1E-10 6.8E-15 112.2 19.3 156 261-464 31-186 (413)
176 KOG0637 Sucrose transporter an 99.3 5E-11 1.1E-15 112.4 12.7 399 8-442 32-476 (498)
177 TIGR00903 2A0129 major facilit 99.3 3.1E-10 6.6E-15 110.1 18.6 161 262-471 7-168 (368)
178 PF05977 MFS_3: Transmembrane 99.3 1.1E-09 2.3E-14 110.2 22.6 168 9-187 219-390 (524)
179 PRK03893 putative sialic acid 99.3 3.8E-10 8.2E-15 114.7 19.8 151 247-437 21-171 (496)
180 PRK09705 cynX putative cyanate 99.3 5.4E-10 1.2E-14 109.9 20.2 178 9-199 206-389 (393)
181 PRK12307 putative sialic acid 99.3 1.9E-10 4E-15 114.6 17.0 150 248-437 20-169 (426)
182 TIGR00712 glpT glycerol-3-phos 99.2 3.5E-10 7.5E-15 113.0 18.4 166 247-460 28-197 (438)
183 TIGR00806 rfc RFC reduced fola 99.2 7.8E-10 1.7E-14 106.8 18.5 161 264-470 43-204 (511)
184 TIGR00881 2A0104 phosphoglycer 99.2 8E-11 1.7E-15 115.0 12.2 140 257-436 6-146 (379)
185 TIGR00769 AAA ADP/ATP carrier 99.2 4.2E-07 9.1E-12 89.6 37.9 288 7-323 6-343 (472)
186 TIGR00879 SP MFS transporter, 99.2 2E-10 4.3E-15 115.9 15.3 163 25-196 301-475 (481)
187 TIGR00882 2A0105 oligosacchari 99.2 4.7E-10 1E-14 110.6 16.9 178 245-467 1-181 (396)
188 TIGR00885 fucP L-fucose:H+ sym 99.2 1.3E-09 2.8E-14 107.5 19.8 149 248-436 5-156 (410)
189 PRK09556 uhpT sugar phosphate 99.2 3.6E-10 7.8E-15 113.8 15.7 133 264-436 47-184 (467)
190 PF11700 ATG22: Vacuole efflux 99.2 3E-09 6.6E-14 105.8 20.7 178 7-196 280-472 (477)
191 KOG3762 Predicted transporter 99.2 3.3E-10 7.1E-15 109.0 12.7 156 242-437 367-523 (618)
192 PRK11273 glpT sn-glycerol-3-ph 99.2 2.8E-09 6.1E-14 106.9 19.8 122 267-429 50-176 (452)
193 PRK10077 xylE D-xylose transpo 99.1 8.4E-10 1.8E-14 111.7 15.7 142 54-196 309-462 (479)
194 PRK10406 alpha-ketoglutarate t 99.1 6.7E-09 1.4E-13 103.5 21.7 148 255-434 31-184 (432)
195 TIGR00883 2A0106 metabolite-pr 99.1 9.1E-10 2E-14 108.1 15.3 158 10-178 221-388 (394)
196 PRK09952 shikimate transporter 99.1 5.7E-09 1.2E-13 104.2 20.9 167 17-194 259-435 (438)
197 PRK11902 ampG muropeptide tran 99.1 3.7E-09 8E-14 104.4 19.3 172 252-469 5-182 (402)
198 KOG1330 Sugar transporter/spin 99.1 5.7E-11 1.2E-15 112.4 5.8 178 247-471 34-211 (493)
199 PRK11128 putative 3-phenylprop 99.1 4.7E-09 1E-13 102.8 19.5 162 8-183 205-371 (382)
200 KOG3764 Vesicular amine transp 99.1 4.9E-10 1.1E-14 103.9 11.5 147 278-471 102-249 (464)
201 PRK10133 L-fucose transporter; 99.1 7.8E-09 1.7E-13 102.9 21.2 146 249-434 29-177 (438)
202 TIGR00880 2_A_01_02 Multidrug 99.1 9.5E-10 2.1E-14 90.8 10.9 132 290-468 6-137 (141)
203 PF02487 CLN3: CLN3 protein; 99.1 1E-07 2.2E-12 91.1 25.7 320 54-433 62-394 (402)
204 COG3104 PTR2 Dipeptide/tripept 99.1 1.9E-09 4.1E-14 103.7 13.6 183 243-472 18-209 (498)
205 TIGR00894 2A0114euk Na(+)-depe 99.1 2.7E-09 5.8E-14 107.5 14.8 128 276-442 70-199 (465)
206 TIGR00887 2A0109 phosphate:H+ 99.1 1.2E-08 2.6E-13 103.7 19.5 124 279-435 53-176 (502)
207 KOG3098 Uncharacterized conser 99.1 5.1E-07 1.1E-11 87.9 29.3 322 57-431 56-409 (461)
208 PRK11010 ampG muropeptide tran 99.1 1.4E-07 3E-12 95.4 26.8 166 17-194 231-405 (491)
209 TIGR00898 2A0119 cation transp 99.0 9.1E-09 2E-13 104.9 18.1 137 58-197 362-500 (505)
210 TIGR00896 CynX cyanate transpo 99.0 7.3E-09 1.6E-13 100.4 16.5 133 263-437 17-149 (355)
211 TIGR02718 sider_RhtX_FptX side 99.0 1.9E-08 4.1E-13 98.9 18.6 167 10-185 210-385 (390)
212 TIGR00901 2A0125 AmpG-related 99.0 1.6E-08 3.5E-13 98.1 17.9 165 264-468 6-177 (356)
213 TIGR00805 oat sodium-independe 99.0 3.3E-09 7.1E-14 109.9 13.6 165 263-437 49-235 (633)
214 KOG2615 Permease of the major 99.0 2.7E-09 5.9E-14 98.5 11.1 116 280-435 66-181 (451)
215 PF03825 Nuc_H_symport: Nucleo 99.0 5E-08 1.1E-12 95.2 20.0 180 8-195 207-399 (400)
216 PRK08633 2-acyl-glycerophospho 99.0 1.5E-08 3.2E-13 113.9 18.5 162 10-182 234-401 (1146)
217 PRK06814 acylglycerophosphoeth 99.0 2E-08 4.4E-13 112.5 19.3 157 242-437 7-171 (1140)
218 PRK15075 citrate-proton sympor 99.0 2.6E-08 5.7E-13 99.3 17.8 156 248-435 17-178 (434)
219 TIGR01301 GPH_sucrose GPH fami 99.0 3.4E-08 7.4E-13 97.8 17.8 196 248-468 6-217 (477)
220 COG2270 Permeases of the major 99.0 2.4E-08 5.1E-13 94.1 15.5 176 7-194 251-431 (438)
221 COG2223 NarK Nitrate/nitrite t 98.9 2E-08 4.3E-13 94.6 14.3 132 268-437 35-166 (417)
222 TIGR00792 gph sugar (Glycoside 98.9 1.8E-08 3.9E-13 100.7 15.2 148 8-166 222-376 (437)
223 PF01306 LacY_symp: LacY proto 98.9 1.5E-07 3.3E-12 90.4 20.7 183 8-198 220-407 (412)
224 KOG3810 Micronutrient transpor 98.9 8.4E-08 1.8E-12 87.5 16.5 356 63-472 54-424 (433)
225 PTZ00207 hypothetical protein; 98.9 1.6E-07 3.4E-12 95.2 20.4 125 270-435 50-180 (591)
226 KOG2532 Permease of the major 98.9 2.1E-08 4.6E-13 99.2 12.9 154 274-471 65-219 (466)
227 COG0738 FucP Fucose permease [ 98.9 2.2E-07 4.9E-12 87.1 18.1 147 254-436 20-166 (422)
228 KOG0569 Permease of the major 98.8 3.6E-07 7.8E-12 89.7 18.8 149 50-199 304-462 (485)
229 PRK09848 glucuronide transport 98.8 1E-07 2.2E-12 95.6 14.5 151 7-166 227-384 (448)
230 KOG2504 Monocarboxylate transp 98.8 1.5E-07 3.3E-12 94.4 14.9 172 8-192 298-476 (509)
231 PF06609 TRI12: Fungal trichot 98.8 3.4E-07 7.4E-12 92.3 17.1 127 267-435 65-191 (599)
232 PF13347 MFS_2: MFS/sugar tran 98.7 3.1E-07 6.7E-12 91.5 16.5 148 7-166 224-380 (428)
233 COG0477 ProP Permeases of the 98.7 1.3E-06 2.8E-11 82.3 18.5 161 13-181 7-175 (338)
234 TIGR00926 2A1704 Peptide:H+ sy 98.7 5E-06 1.1E-10 85.9 23.9 134 54-188 26-179 (654)
235 KOG4686 Predicted sugar transp 98.7 9.9E-07 2.2E-11 78.4 15.4 148 7-167 263-411 (459)
236 PF13000 Acatn: Acetyl-coenzym 98.7 1.4E-05 3.1E-10 77.2 24.5 389 11-437 3-468 (544)
237 TIGR01272 gluP glucose/galacto 98.7 1.6E-06 3.4E-11 82.1 18.1 157 9-177 141-301 (310)
238 KOG3574 Acetyl-CoA transporter 98.7 6.7E-06 1.4E-10 76.3 20.5 361 7-437 30-432 (510)
239 PRK10429 melibiose:sodium symp 98.6 7.3E-07 1.6E-11 89.9 15.8 152 253-437 13-170 (473)
240 KOG0254 Predicted transporter 98.6 2.1E-06 4.6E-11 87.5 18.7 112 283-434 90-201 (513)
241 PRK09669 putative symporter Ya 98.6 5.2E-07 1.1E-11 90.3 14.0 149 256-437 19-173 (444)
242 KOG3762 Predicted transporter 98.6 7.8E-07 1.7E-11 86.2 12.3 163 13-187 376-543 (618)
243 PF06813 Nodulin-like: Nodulin 98.6 3.2E-06 7E-11 76.1 15.5 116 47-165 33-152 (250)
244 TIGR00788 fbt folate/biopterin 98.5 4.9E-06 1.1E-10 83.6 17.2 175 248-471 28-211 (468)
245 KOG4332 Predicted sugar transp 98.5 1.5E-06 3.3E-11 76.6 11.1 327 17-420 46-390 (454)
246 PRK11462 putative transporter; 98.5 6.1E-06 1.3E-10 82.8 16.8 151 254-437 17-173 (460)
247 KOG0253 Synaptic vesicle trans 98.5 7.2E-07 1.6E-11 82.3 8.9 126 61-192 391-519 (528)
248 COG2807 CynX Cyanate permease 98.5 1.5E-05 3.3E-10 73.9 17.2 167 10-189 210-383 (395)
249 KOG0255 Synaptic vesicle trans 98.4 1.7E-06 3.7E-11 88.5 12.2 121 275-435 111-231 (521)
250 KOG2533 Permease of the major 98.4 6.8E-06 1.5E-10 81.8 15.5 155 275-470 74-229 (495)
251 PF05631 DUF791: Protein of un 98.4 0.00019 4.2E-09 67.1 23.9 152 275-472 62-219 (354)
252 PF03219 TLC: TLC ATP/ADP tran 98.4 0.0014 3.1E-08 65.3 31.3 235 65-319 73-355 (491)
253 PF06813 Nodulin-like: Nodulin 98.4 2.1E-05 4.6E-10 70.8 16.2 163 268-472 23-185 (250)
254 COG2211 MelB Na+/melibiose sym 98.3 5.5E-06 1.2E-10 80.8 12.0 151 7-166 235-392 (467)
255 KOG0252 Inorganic phosphate tr 98.3 5.5E-06 1.2E-10 79.0 11.1 123 279-433 81-203 (538)
256 PF12832 MFS_1_like: MFS_1 lik 98.3 3.5E-06 7.6E-11 60.9 7.4 70 13-90 5-74 (77)
257 TIGR00926 2A1704 Peptide:H+ sy 98.3 4.4E-05 9.5E-10 79.0 17.8 173 261-467 2-180 (654)
258 PF03209 PUCC: PUCC protein; 98.3 7.6E-05 1.6E-09 71.0 17.4 169 11-187 211-394 (403)
259 KOG2325 Predicted transporter/ 98.2 7.2E-05 1.6E-09 73.3 16.2 153 246-436 34-191 (488)
260 PF05978 UNC-93: Ion channel r 98.1 9.8E-05 2.1E-09 61.4 13.3 104 57-165 43-146 (156)
261 PF06779 DUF1228: Protein of u 98.1 2E-05 4.4E-10 57.4 7.9 75 21-103 5-79 (85)
262 PF00083 Sugar_tr: Sugar (and 98.0 9.6E-08 2.1E-12 95.9 -7.7 113 282-433 46-161 (451)
263 KOG1237 H+/oligopeptide sympor 98.0 0.0064 1.4E-07 62.1 26.5 132 54-186 76-240 (571)
264 COG3202 ATP/ADP translocase [E 98.0 0.021 4.4E-07 55.8 31.1 249 52-325 62-364 (509)
265 KOG3880 Predicted small molecu 97.9 4.8E-05 1E-09 68.6 8.4 136 53-197 64-205 (409)
266 PF12832 MFS_1_like: MFS_1 lik 97.9 0.00011 2.5E-09 53.0 8.6 71 250-322 4-74 (77)
267 TIGR00939 2a57 Equilibrative N 97.9 0.0074 1.6E-07 59.7 23.9 52 378-429 376-427 (437)
268 PF03092 BT1: BT1 family; Int 97.9 0.00058 1.3E-08 67.8 16.0 160 267-470 10-176 (433)
269 KOG2563 Permease of the major 97.8 0.00082 1.8E-08 64.5 15.5 160 246-437 41-203 (480)
270 KOG2816 Predicted transporter 97.8 0.00066 1.4E-08 67.3 15.4 131 292-472 72-202 (463)
271 PF05978 UNC-93: Ion channel r 97.6 0.0076 1.6E-07 50.2 15.7 107 289-435 44-150 (156)
272 KOG1479 Nucleoside transporter 97.5 0.08 1.7E-06 50.9 23.0 50 378-427 347-396 (406)
273 COG0477 ProP Permeases of the 97.2 0.02 4.4E-07 53.3 16.8 137 260-436 16-158 (338)
274 PF00854 PTR2: POT family; In 97.2 0.0059 1.3E-07 59.5 13.1 105 82-187 2-119 (372)
275 PF01770 Folate_carrier: Reduc 97.2 0.035 7.6E-07 53.8 17.8 164 261-470 18-183 (412)
276 PF06779 DUF1228: Protein of u 97.0 0.0077 1.7E-07 44.0 8.6 77 260-338 6-82 (85)
277 TIGR00769 AAA ADP/ATP carrier 97.0 0.088 1.9E-06 52.5 18.9 177 246-436 7-191 (472)
278 PF03137 OATP: Organic Anion T 96.9 0.00016 3.6E-09 73.4 -0.7 176 260-436 16-203 (539)
279 KOG0637 Sucrose transporter an 96.8 0.0024 5.1E-08 61.5 5.5 161 246-431 32-200 (498)
280 KOG3626 Organic anion transpor 96.7 0.0078 1.7E-07 62.1 9.0 197 264-473 114-347 (735)
281 KOG3098 Uncharacterized conser 96.6 0.073 1.6E-06 52.5 14.7 150 9-164 241-408 (461)
282 PRK03612 spermidine synthase; 96.3 0.44 9.6E-06 48.5 18.9 145 12-166 18-167 (521)
283 KOG2601 Iron transporter [Inor 96.3 0.14 3.1E-06 48.2 13.5 76 8-90 27-102 (503)
284 PRK03612 spermidine synthase; 96.2 0.6 1.3E-05 47.6 19.2 150 251-435 19-170 (521)
285 PF02487 CLN3: CLN3 protein; 96.0 0.21 4.6E-06 48.4 14.1 109 50-166 280-393 (402)
286 PF00854 PTR2: POT family; In 95.7 0.074 1.6E-06 51.9 10.2 86 378-471 37-125 (372)
287 KOG3574 Acetyl-CoA transporter 95.4 0.45 9.8E-06 45.2 13.2 157 245-430 30-189 (510)
288 PF06963 FPN1: Ferroportin1 (F 95.1 0.9 1.9E-05 44.9 15.0 129 47-176 289-424 (432)
289 PF07672 MFS_Mycoplasma: Mycop 94.2 4.1 8.9E-05 36.8 16.1 50 140-189 2-60 (267)
290 KOG4332 Predicted sugar transp 91.7 0.86 1.9E-05 41.2 7.5 55 271-326 61-115 (454)
291 KOG1237 H+/oligopeptide sympor 91.6 3.4 7.4E-05 42.5 13.0 175 251-444 42-227 (571)
292 KOG4830 Predicted sugar transp 91.3 0.13 2.8E-06 45.8 2.1 147 245-427 200-348 (412)
293 KOG3097 Predicted membrane pro 91.0 14 0.00031 34.8 18.4 97 61-162 68-175 (390)
294 PF07857 DUF1632: CEO family ( 90.6 13 0.00028 33.7 15.4 32 261-292 193-228 (254)
295 TIGR00939 2a57 Equilibrative N 90.0 4.4 9.5E-05 40.3 11.8 111 52-164 308-428 (437)
296 PF01733 Nucleoside_tran: Nucl 89.8 0.12 2.5E-06 49.0 0.6 52 378-429 252-303 (309)
297 PF03219 TLC: TLC ATP/ADP tran 85.9 42 0.00092 34.0 17.6 176 246-435 24-205 (491)
298 KOG3880 Predicted small molecu 84.1 4.9 0.00011 37.3 7.4 74 88-165 326-399 (409)
299 KOG2881 Predicted membrane pro 80.9 27 0.00059 31.4 10.5 23 303-325 260-282 (294)
300 KOG1479 Nucleoside transporter 76.0 26 0.00057 34.1 9.9 127 28-164 263-399 (406)
301 PF13000 Acatn: Acetyl-coenzym 75.9 24 0.00052 35.4 9.7 83 249-332 3-90 (544)
302 COG5336 Uncharacterized protei 71.5 36 0.00079 25.9 7.5 39 405-444 37-75 (116)
303 PF01733 Nucleoside_tran: Nucl 69.0 1.9 4E-05 40.8 0.5 149 9-164 144-304 (309)
304 PF02990 EMP70: Endomembrane p 68.8 1.4E+02 0.0031 30.5 16.6 23 289-312 304-326 (521)
305 KOG3097 Predicted membrane pro 65.9 73 0.0016 30.2 9.9 28 297-325 73-100 (390)
306 COG5336 Uncharacterized protei 65.4 23 0.00049 27.0 5.4 41 50-90 41-82 (116)
307 COG3202 ATP/ADP translocase [E 54.0 2.5E+02 0.0054 28.4 16.4 43 394-436 168-210 (509)
308 KOG3810 Micronutrient transpor 51.6 60 0.0013 31.1 6.9 98 51-152 271-370 (433)
309 KOG2601 Iron transporter [Inor 50.9 2.5E+02 0.0054 27.4 11.9 73 249-322 30-102 (503)
310 TIGR02840 spore_YtaF putative 43.7 2.3E+02 0.0049 24.9 14.2 48 278-326 153-202 (206)
311 COG4262 Predicted spermidine s 41.6 3.3E+02 0.0072 26.3 14.3 55 378-434 109-163 (508)
312 PF02694 UPF0060: Uncharacteri 37.7 85 0.0018 24.0 4.7 51 282-333 54-104 (107)
313 PF06783 UPF0239: Uncharacteri 37.1 86 0.0019 22.8 4.4 20 170-189 23-42 (85)
314 PRK02237 hypothetical protein; 33.9 1.4E+02 0.003 23.0 5.3 50 283-333 57-106 (109)
315 PRK09664 tryptophan permease T 31.1 5.4E+02 0.012 25.5 16.2 19 381-399 201-219 (415)
316 PRK13629 threonine/serine tran 30.9 5.6E+02 0.012 25.7 17.7 32 138-169 18-49 (443)
317 PF11947 DUF3464: Protein of u 28.5 1.6E+02 0.0034 24.5 5.2 49 107-159 97-145 (153)
318 TIGR00814 stp serine transport 27.7 6E+02 0.013 25.0 18.0 34 138-171 2-35 (397)
319 COG2962 RarD Predicted permeas 24.9 5.7E+02 0.012 23.8 9.8 56 280-338 97-152 (293)
320 COG1288 Predicted membrane pro 23.9 5.3E+02 0.011 25.7 8.5 33 395-428 406-438 (481)
321 PRK11469 hypothetical protein; 23.9 4.7E+02 0.01 22.5 17.5 53 278-330 130-182 (188)
322 PF01988 VIT1: VIT family; In 23.4 5.1E+02 0.011 22.7 9.0 16 260-275 142-157 (213)
323 PF04341 DUF485: Protein of un 23.3 3.1E+02 0.0068 20.3 6.3 50 245-294 15-64 (91)
324 COG1268 BioY Uncharacterized c 23.2 2E+02 0.0043 24.7 5.2 22 59-80 90-111 (184)
325 PF02694 UPF0060: Uncharacteri 22.9 1.6E+02 0.0034 22.6 3.9 49 54-102 57-105 (107)
326 PRK02237 hypothetical protein; 22.1 2E+02 0.0042 22.2 4.3 50 53-102 58-107 (109)
327 PF11947 DUF3464: Protein of u 21.5 4.7E+02 0.01 21.7 6.7 33 393-425 113-145 (153)
328 COG4125 Predicted membrane pro 20.8 3.4E+02 0.0073 21.9 5.5 53 16-79 16-68 (149)
329 PF11511 RhodobacterPufX: Intr 20.7 2.8E+02 0.006 19.2 4.3 31 169-199 30-60 (67)
330 COG4262 Predicted spermidine s 20.1 8.1E+02 0.018 23.8 15.7 81 54-135 46-132 (508)
No 1
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.8e-35 Score=277.39 Aligned_cols=373 Identities=16% Similarity=0.165 Sum_probs=307.7
Q ss_pred hhHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHH
Q 011514 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (484)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~ 86 (484)
+..+..+.++.|.......+..+.+|++.+|+ +++....|+..+.|.++..+++|+...+.||+.||++++.
T Consensus 12 ~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl--------~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~ 83 (394)
T COG2814 12 WLALLALALAAFAIGTTEFVPVGLLPPIAADL--------GVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLG 83 (394)
T ss_pred hHHHHHHHHHHHHHHhHHHHHHhchHHHHHHc--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHH
Confidence 45567778888888899999999999999887 6677788999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhH-
Q 011514 87 PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAAR- 165 (484)
Q Consensus 87 ~~~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~- 165 (484)
...++.++.+++++++| ++.++++|++.|+.. |.+.+...++..|..|+++|++++++...+.+++.++|..+|.
T Consensus 84 ~l~lFi~~n~l~alAp~---f~~Ll~aR~~~g~a~-G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ 159 (394)
T COG2814 84 LLALFIVSNLLSALAPS---FAVLLLARALAGLAH-GVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTF 159 (394)
T ss_pred HHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHH
Confidence 99999999999999999 999999999999765 8888999999999999999999999999999999888876665
Q ss_pred ---hhhhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHHHHHHh
Q 011514 166 ---FLSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLL 242 (484)
Q Consensus 166 ---~l~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (484)
.+|||.+|+..+.++++..+..+..+| |++.+++ ...+.++.++ .
T Consensus 160 ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP--~~~~~~~-----------------------------~~~~~~~~~~-~ 207 (394)
T COG2814 160 LGQLFGWRATFLAIAVLALLALLLLWKLLP--PSEISGS-----------------------------LPGPLRTLLR-L 207 (394)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHhCC--CccCCCC-----------------------------CCcchhHHHH-H
Confidence 469999999999999999999999999 2211111 1123344444 4
Q ss_pred hccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHH
Q 011514 243 RSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFA 322 (484)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~ 322 (484)
.++|.++...+..++...+++..++|+..++++..|++.+..++.+..++++..+++ .+.|++.|| +.++.+.....+
T Consensus 208 l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn-~~gGrl~dr-~~~~~l~~~~~l 285 (394)
T COG2814 208 LRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGN-LLGGRLADR-GPRRALIAALLL 285 (394)
T ss_pred hcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHH-HHHhhhccc-cchhHHHHHHHH
Confidence 567889999999999999999999999999999999999999999999999999999 888999999 888888888777
Q ss_pred HHHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcc
Q 011514 323 ACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQ 402 (484)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 402 (484)
.++.++.+.+..+.... ......+.++.........+....+.
T Consensus 286 ~a~~~l~l~~~~~~~~~-------------------------------------~~~~~~~wg~a~~~~~~~~~~~~a~~ 328 (394)
T COG2814 286 LALALLALTFTGASPAL-------------------------------------ALALLFLWGFAFSPALQGLQTRLARL 328 (394)
T ss_pred HHHHHHHHHHhcchHHH-------------------------------------HHHHHHHHHHHhhhhhhHHHHHhccc
Confidence 77777776665543320 13333345666555555566666663
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHHHHHHhccC
Q 011514 403 VGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSHT 471 (484)
Q Consensus 403 ~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (484)
. ||.++.+.+++....++|..+|..++|.++|+. ++.. ...+.++..+++..+.....++
T Consensus 329 ~-p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~-g~~~-------~~~~~a~l~~~a~~~~~~~~~~ 388 (394)
T COG2814 329 A-PDAADLAGSLNVAAFNLGIALGAALGGLVLDAL-GYAA-------TGWVGAALLLLALLLALLSARK 388 (394)
T ss_pred C-CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-chHH-------HHHHHHHHHHHHHHHHHHHHhc
Confidence 3 588999999999999999999999999999995 6655 4466666666666665544443
No 2
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=8.9e-35 Score=285.58 Aligned_cols=366 Identities=14% Similarity=0.134 Sum_probs=277.6
Q ss_pred HHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHH
Q 011514 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLT 89 (484)
Q Consensus 10 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~ 89 (484)
++.+.+..++.........+.+|.+.+|+ +.+..+.|+..+.+.+++.+++++.|.++||+|||+++..+.+
T Consensus 11 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~~--------~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 82 (390)
T PRK03545 11 VVTLALAAFIFNTTEFVPVGLLSDIAQSF--------HMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFV 82 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHcchHHHHhHc--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHH
Confidence 44445555554444455667788887766 5666778999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHh---
Q 011514 90 LSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF--- 166 (484)
Q Consensus 90 ~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~--- 166 (484)
+..++.++++++++ ++.+++.|+++|++. +...+...+++.|++|+|+|++++++.+...++|..+||.+++.
T Consensus 83 ~~~~~~~~~~~~~~---~~~l~~~r~~~G~~~-~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~ 158 (390)
T PRK03545 83 LFIASHVLSALAWN---FTVLLISRIGIAFAH-AIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQ 158 (390)
T ss_pred HHHHHHHHHHHhcc---HHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 99999999999999 899999999999755 66778899999999999999999999999999999999988865
Q ss_pred -hhhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHHHHHHhhcc
Q 011514 167 -LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSS 245 (484)
Q Consensus 167 -l~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (484)
.+||+.|++.+++.++..+.....+||+++++++ +.++ .+...++
T Consensus 159 ~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~~---------------------------------~~~~-~~~~~~~ 204 (390)
T PRK03545 159 YLGWRTTFLAIGGGALITLLLLIKLLPLLPSEHSG---------------------------------SLKS-LPLLFRR 204 (390)
T ss_pred HhcHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCcc---------------------------------hHHH-HHHHHhC
Confidence 5899999999988777766666666664321100 1112 2235566
Q ss_pred chhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHH
Q 011514 246 VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACI 325 (484)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~ 325 (484)
|.++......++.........++.+.|+++..|+++.+.+...+..+++..+++ ++.+++.||+++|... .+..+...
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~-~~~g~l~dr~~~~~~~-~~~~~~~~ 282 (390)
T PRK03545 205 PALVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGS-VLFSRLGNRHPSGFLL-IAIALLLV 282 (390)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHH-HHHHHHhhccchhHHH-HHHHHHHH
Confidence 777666665555555555566778888888889999999999999999999998 7779999999887654 44444434
Q ss_pred HHHHH-hhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccC
Q 011514 326 NMFIC-SISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVG 404 (484)
Q Consensus 326 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p 404 (484)
+...+ ...++.+. +.....+.|++.....+...+.+.+..|
T Consensus 283 ~~~~l~~~~~~~~~--------------------------------------~~~~~~l~g~~~~~~~~~~~~~~~~~~~ 324 (390)
T PRK03545 283 CLLLLLPAANSEWH--------------------------------------LSVLSIFWGIAIMCIGLAMQVKVLKLAP 324 (390)
T ss_pred HHHHHHHHhchHHH--------------------------------------HHHHHHHHHHHHhcchHHHHHHHHHhCC
Confidence 33332 33333333 1334446677766666777778888776
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHHHHHHhcc
Q 011514 405 PNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSH 470 (484)
Q Consensus 405 ~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (484)
+++++++|..+...++|..+||.+.|.+.|+. +.+. .+.+.+.+.+++.+......+
T Consensus 325 -~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~-g~~~-------~~~~~~~~~~~~~~~~~~~~~ 381 (390)
T PRK03545 325 -DATDVAMALFSGIFNIGIGAGALLGNQVSLHL-GLSS-------IGYVGAALALAALVWSILIFR 381 (390)
T ss_pred -CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ChhH-------HHHHHHHHHHHHHHHHHHHcc
Confidence 68899999999999999999999999999986 6554 456666666666666555444
No 3
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=5.2e-34 Score=281.96 Aligned_cols=351 Identities=15% Similarity=0.130 Sum_probs=270.0
Q ss_pred HHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHH
Q 011514 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLT 89 (484)
Q Consensus 10 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~ 89 (484)
+...+...+++.++.....+..|.+.+++ +.+..+.|++.+.+.++..++.++.|+++||+|||+++..+.+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 88 (406)
T PRK11551 17 IGLCFLVALLEGLDLQSAGVAAPRMAQEF--------GLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVA 88 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHH
Confidence 34445667777888888888888888776 4556678999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHh---
Q 011514 90 LSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF--- 166 (484)
Q Consensus 90 ~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~--- 166 (484)
+..++.+++.++++ ++.+++.|++.|++. +...+...+++.|++|+++|++++++.+....+|..+++.++..
T Consensus 89 ~~~~~~~~~~~~~~---~~~~~~~~~l~G~~~-~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~ 164 (406)
T PRK11551 89 LFGLFSLATAQAWD---FPSLLVARLLTGVGL-GGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAG 164 (406)
T ss_pred HHHHHHHHHHHhcc---HHHHHHHHHHHHhhH-HHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 99999999999998 888999999999755 66678899999999999999999999999999999999988755
Q ss_pred -hhhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHHHHHHhhcc
Q 011514 167 -LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSS 245 (484)
Q Consensus 167 -l~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (484)
.+||..|++.+++.++..+...+++||++++.+++++ + +++.+..+..++. .++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~---------------~---------~~~~~~~~~~~~~-~~~ 219 (406)
T PRK11551 165 DAAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGA---------------G---------KQRAPVLRALFGE-GRA 219 (406)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCc---------------c---------hhhhhhHHHHhhh-hhh
Confidence 4799999998877666666666778887653322100 0 0000001111110 111
Q ss_pred chhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHH
Q 011514 246 VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACI 325 (484)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~ 325 (484)
+..+......++..........+.|.|+++ .|+++.+.+...+..+++..++. ++.+++.||+++|+.+..+.....+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~-~~~g~l~dr~g~~~~~~~~~~~~~~ 297 (406)
T PRK11551 220 TATLLLWISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGS-LLIGALMDRLRPRRVVLLIYAGILA 297 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHH-HHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 223333333444444555667788999887 49999999999999999999998 7779999999999988877666666
Q ss_pred HHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCC
Q 011514 326 NMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGP 405 (484)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~ 405 (484)
++..+...++.+. ......+.+++.....+...++..|.+|+
T Consensus 298 ~~~~~~~~~~~~~--------------------------------------~~~~~~~~g~~~~~~~~~~~~~~~~~~p~ 339 (406)
T PRK11551 298 SLAALAAAPSFAG--------------------------------------MLLAGFAAGLFVVGGQSVLYALAPLFYPT 339 (406)
T ss_pred HHHHHHhcCcHHH--------------------------------------HHHHHHHHHHHHHhHHHHHHHHHHHHcch
Confidence 6665555554433 13334456666666778888999999999
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 011514 406 NEQGKAQGCISGISSFANIVSPLIFSPLTALF 437 (484)
Q Consensus 406 ~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~ 437 (484)
++||++.|+.+....++..++|.+.|.+.++.
T Consensus 340 ~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~ 371 (406)
T PRK11551 340 QVRGTGVGAAVAVGRLGSMAGPLLAGQLLALG 371 (406)
T ss_pred hhhhhhhhHHHHhhhHHHHHHhhhHhhhhccC
Confidence 99999999999999999999999999999864
No 4
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=1.7e-33 Score=279.90 Aligned_cols=393 Identities=11% Similarity=0.054 Sum_probs=272.5
Q ss_pred HHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHH
Q 011514 11 SHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTL 90 (484)
Q Consensus 11 ~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~ 90 (484)
...++..+...+......+.+|.+.+++ +.+..+.|++.+.+.++..+++++.|+++||+|||+++..+.++
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~ 97 (434)
T PRK11663 26 ITMYLGYALFYFTRKSFNAAMPEMLADL--------GLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIA 97 (434)
T ss_pred HHHHHHHHHHHHhhhhHHHhhHHHHHhc--------CCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHH
Confidence 3445555666666667778888887765 55667789999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHh----
Q 011514 91 SIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF---- 166 (484)
Q Consensus 91 ~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~---- 166 (484)
.+++.++++++++ ++.+++.|++.|++. +...+...+++.|++|+++|++++++.+...++|..++|.+++.
T Consensus 98 ~~~~~~~~~~~~~---~~~l~~~~~l~g~~~-g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~ 173 (434)
T PRK11663 98 TGIINILFGFSSS---LWAFALLWVLNAFFQ-GWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALH 173 (434)
T ss_pred HHHHHHHHHHHhH---HHHHHHHHHHHHHHH-HccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 9999999999999 888899999999755 55567889999999999999999999999999999999987765
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHHHHH-Hhhcc
Q 011514 167 LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLIC-LLRSS 245 (484)
Q Consensus 167 l~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 245 (484)
.+||+.|++.+++.++..+...+.+||+|++...+++.++. .+ .++..+ +.+++..+.++.++ ...++
T Consensus 174 ~gw~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-------~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~ 242 (434)
T PRK11663 174 YGWRYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWR-------HD-ALELAQ---QQEGAGLSRKEILTKYVLLN 242 (434)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCccccc-------cc-ccccch---hccccCCChhhhHHHHHhcC
Confidence 48999999988777666666666678876433211100000 00 000000 00001112333222 24566
Q ss_pred chhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhh--cchHHH-HHhHHH
Q 011514 246 VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPIL--GEAKLL-SLGLFA 322 (484)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--g~~~~~-~~~~~~ 322 (484)
+.++...+..++.........+++|.|+++.+|++..+.+...+...++..++. ++.++++||+ ++|+.. ......
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~-~~~g~l~dr~~~~~r~~~~~~~~~~ 321 (434)
T PRK11663 243 PYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGA-LVAGWGSDKLFNGNRGPMNLIFAAG 321 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH-HHHhhhHHHhccCCccHHHHHHHHH
Confidence 778877777777776777788899999988889999999999999999999998 7779999998 333322 111111
Q ss_pred HHHHHHHHh-hccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhc
Q 011514 323 ACINMFICS-ISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSK 401 (484)
Q Consensus 323 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 401 (484)
..+....+. ....... . ........+++.............|
T Consensus 322 ~~~~~~~~~~~~~~~~~----------~---------------------------~~~~~~~~g~~~~~~~~~~~~~~~~ 364 (434)
T PRK11663 322 ILLSVGSLWLMPFASYV----------M---------------------------QAACFFTIGFFVFGPQMLIGMAAAE 364 (434)
T ss_pred HHHHHHHHHHcccccHH----------H---------------------------HHHHHHHHHHHHhhHHHHHHHHHHh
Confidence 111111111 1111111 0 0111122333222222233456678
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHHHHHHhccCC
Q 011514 402 QVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSHTP 472 (484)
Q Consensus 402 ~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (484)
..|+++||++.|+.+...++|..++|.+.|.+.|+. +++. .|.+.+++.+++.+..++..+++
T Consensus 365 ~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~-g~~~-------~f~~~~~~~~~~~~~~~~~~~~~ 427 (434)
T PRK11663 365 CSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIW-HWTG-------FFVVISIAAGISALLLLPFLNAQ 427 (434)
T ss_pred cccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhc-ccHH-------HHHHHHHHHHHHHHHHHHHHhhh
Confidence 899999999999999999999999999999999986 5554 45666666555555444443333
No 5
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=8.1e-34 Score=280.01 Aligned_cols=382 Identities=12% Similarity=0.061 Sum_probs=271.1
Q ss_pred hhHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHH
Q 011514 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (484)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~ 86 (484)
++.+..+++..+++.++........|.+.+|+ +.+..+.|++.+++.+++.+++++.|+++||+|||+++..
T Consensus 7 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~--------~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~ 78 (412)
T TIGR02332 7 RRLIIFLFILFIFSFLDRINIGFAGLTMGKDL--------GLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAG 78 (412)
T ss_pred hHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhc--------CCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHH
Confidence 45566667777777888888888888666555 5666788999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHh
Q 011514 87 PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF 166 (484)
Q Consensus 87 ~~~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~ 166 (484)
+.++.+++.++++++++ ++.+++.|+++|++. +...|....++.|++|+++|++++++++...++|..+++.+++.
T Consensus 79 ~~~~~~~~~~~~~~~~~---~~~l~~~r~l~G~~~-~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~ 154 (412)
T TIGR02332 79 IMVLWGIASTATMFATG---PESLYLLRILVGIAE-AGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGY 154 (412)
T ss_pred HHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHH-hhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999 889999999999865 66678888999999999999999999999999999999988764
Q ss_pred ----------hhhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCC-CCCCCcccccccccCCCCCCCCccCcccCCCCch
Q 011514 167 ----------LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDD-DLTRPIITEETEGVNQNESNSPVKIPVCKKIPSI 235 (484)
Q Consensus 167 ----------l~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (484)
.+||+.|++.++..++..++.++++||+|++.+.. +++++......+ .++.+.+.++ ...+++....
T Consensus 155 l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~ 232 (412)
T TIGR02332 155 ILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWLDEEDKKALKEMID-NDQLTLEQPE-GAFAHAAMPQ 232 (412)
T ss_pred HHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcccCCCCCHHHHHHHHHHHH-hccccccccc-cccccccccH
Confidence 38999999988888777777777789987543210 000000000000 0000000000 0000111111
Q ss_pred HHHHHHhhccchhHHHHHHHHHHhchhhhhHHHHHHHHhhh-cCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchH
Q 011514 236 RDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQ-FHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAK 314 (484)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ 314 (484)
++.++.++ ++.++...+..++.........+++|.|+++. .|++..+.+.+.....++..++. ++.++++||+++|+
T Consensus 233 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~-l~~g~l~dr~~~r~ 310 (412)
T TIGR02332 233 RSMLREIF-TPAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGM-IWWSRHSDRLKERK 310 (412)
T ss_pred HHHHHHhc-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHH-HHHHHHhcccCccH
Confidence 22233344 46677777777777777888899999999873 46788888888899999999998 77799999998766
Q ss_pred H-HHHhHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhh
Q 011514 315 L-LSLGLFAACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATP 393 (484)
Q Consensus 315 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 393 (484)
. .........+++.+.....+... ......+.+.+.....+
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------~~~~~~~~~~g~~~~~~ 352 (412)
T TIGR02332 311 HHTALPYLFAAAGWLLASATDHNLI--------------------------------------QLLGIIMASMGSFSAMA 352 (412)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCHHH--------------------------------------HHHHHHHHHHHhhhhhh
Confidence 4 33333333333322222211111 01111122222222333
Q ss_pred HHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 011514 394 SFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGA 442 (484)
Q Consensus 394 ~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~ 442 (484)
.......+..|+++|+++.|+.+...++|++++|.+.|.+.|..+++..
T Consensus 353 ~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~ 401 (412)
T TIGR02332 353 IFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATGSFNS 401 (412)
T ss_pred HHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCch
Confidence 3445556778999999999999999999999999999999998644554
No 6
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=100.00 E-value=1.6e-33 Score=274.15 Aligned_cols=351 Identities=15% Similarity=0.155 Sum_probs=281.3
Q ss_pred HHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHHH
Q 011514 12 HLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLS 91 (484)
Q Consensus 12 ~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~ 91 (484)
.++...++..++.++..+.+|.+..+. +.+..+.|++.+++.++..++++++|+++||+|||+++..+.++.
T Consensus 3 ~l~~~~~~~~~~~~~~~~~~~~~~~~~--------~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~ 74 (365)
T TIGR00900 3 LLFAAQLISLIGTAITQVALPLYVLAG--------TGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIR 74 (365)
T ss_pred ehHHHHHHHHHHHHHHHHHHHHHHHHh--------hccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHH
Confidence 456788899999999999999998876 455667899999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcc-----chhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHh
Q 011514 92 IIPLAILAYRR-----SISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF 166 (484)
Q Consensus 92 ~i~~~~~~~~~-----~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~ 166 (484)
.++..+..+.+ + ++.+++.|++.|++. +...+...+++.|+.|+++|++++++.+....+|.++||.+++.
T Consensus 75 ~~~~~~~~~~~~~~~~~---~~~~~~~~~l~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~ 150 (365)
T TIGR00900 75 AVLVAVLPFVALLGGLN---IWQVYVLAGILAIAQ-AFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGL 150 (365)
T ss_pred HHHHHHHHHHHHcCCCc---HHHHHHHHHHHHHHH-HHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 88888888776 7 888999999999755 77778999999999999999999999999999999999988876
Q ss_pred ----hhhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHHHHHHh
Q 011514 167 ----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLL 242 (484)
Q Consensus 167 ----l~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (484)
.+||+.|++.++..++..+..+. ++++++++++++ + ..++..++.++..+..
T Consensus 151 l~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-----------------~------~~~~~~~~~~~~~~~~ 206 (365)
T TIGR00900 151 MYATLGIKWAIWVDAVGFAISALLIVS-VRIPELAASEIQ-----------------A------LSNAVLRDTREGIKFV 206 (365)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHh-cccccCCCcccc-----------------c------cchhHHHHHHhHHHHH
Confidence 48999999887666555444433 322111110100 0 0000011233445557
Q ss_pred hccchhHHHHHHHHHHhchhhhhH-HHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHH
Q 011514 243 RSSVTLSQAAVVAFFSGLSEGGMQ-ASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLF 321 (484)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~ 321 (484)
+++|.++......++......... .+.|.|.++.+|.++.+.+......+++..++. ++.+++.||.++++.+..+..
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~ 285 (365)
T TIGR00900 207 LKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGA-LLLGLLGRYFKRMALMTGAIF 285 (365)
T ss_pred HcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHH-HHHHHHHHHhchhHHHHHHHH
Confidence 788888888777777776666655 788999988789999999999999999998888 666899999999998888777
Q ss_pred HHHHHHHHHhhccc-hhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHh
Q 011514 322 AACINMFICSISWS-AWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVS 400 (484)
Q Consensus 322 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 400 (484)
+.+++.....+.++ .+. .....++.+++.+...+...++..
T Consensus 286 ~~~~~~~~~~~~~~~~~~--------------------------------------~~~~~~~~g~~~~~~~~~~~~~~~ 327 (365)
T TIGR00900 286 VIGLAILVVGLTPPNFPL--------------------------------------FLVLWFAIGVGYGPINVPQGTLLQ 327 (365)
T ss_pred HHHHHHHHHHhhchhHHH--------------------------------------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777666665543 332 144555778888888899999999
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 011514 401 KQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 437 (484)
Q Consensus 401 ~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~ 437 (484)
|.+|+++||++.|+.+...+++..++|.+.|.+.|..
T Consensus 328 ~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~ 364 (365)
T TIGR00900 328 RRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHL 364 (365)
T ss_pred HhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 9999999999999999999999999999999999864
No 7
>PRK03633 putative MFS family transporter protein; Provisional
Probab=100.00 E-value=1.3e-32 Score=269.36 Aligned_cols=369 Identities=15% Similarity=0.112 Sum_probs=273.7
Q ss_pred CcchhhHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchh
Q 011514 3 MEKEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKA 82 (484)
Q Consensus 3 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~ 82 (484)
|++++|+++.++.+.++..++.+...|.+|.+.+++ +.+..+.|++.+.+.++..+++++.|+++||+|||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~--------~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~ 72 (381)
T PRK03633 1 MSTYTRPVLLLLCGLLLLTLAIAVLNTLVPLWLAQE--------HLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNR 72 (381)
T ss_pred CcHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHc--------CCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 567788999999999999999999999999999876 445567899999999999999999999999999999
Q ss_pred HhHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHH
Q 011514 83 MLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTL 162 (484)
Q Consensus 83 ~l~~~~~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~ 162 (484)
.+..+.++.+++..+++++++ ++.+++.|+++|++. +...|...+.+.|..++++|+++++..+...++|..+||.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~l~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 148 (381)
T PRK03633 73 SYYLASLIFAAGCAGLGLMVG---FWSWLAWRFVAGIGC-AMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQL 148 (381)
T ss_pred HHHHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999 889999999999765 6666777888889999999999999999999999999999
Q ss_pred hhHhhhh---HHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHHHH
Q 011514 163 AARFLST---TSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLI 239 (484)
Q Consensus 163 l~~~l~~---~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (484)
+++.+.. +...+..+...... +...+ .+.++++++++ +..+.++
T Consensus 149 ~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~-----------------------------~~~~~~~-- 195 (381)
T PRK03633 149 LVSKVSTELMSVLPWVTGLVLAAI-LPLLF-TRILNQQAENH-----------------------------DSTSIWP-- 195 (381)
T ss_pred HHhcccccccchHHHHHHHHHHHH-HHHHH-hcccCCCCCCC-----------------------------CCCCHHH--
Confidence 9887532 22222222222211 11111 22211110000 0012222
Q ss_pred HHhhccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHh
Q 011514 240 CLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLG 319 (484)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~ 319 (484)
..++|..+......+...........++|.|.++. |.++.+.+.+.+...+...+++ +..+++.||+++|+.+..+
T Consensus 196 --~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~-g~s~~~~g~~~~~~~~~~~~~~-~~~g~l~dr~~~~~~l~~~ 271 (381)
T PRK03633 196 --MLKLRQARLGVNGCIISGIVLGSLYGLMPLYLNHQ-GMSDASIGFWMALLVSAGILGQ-WPIGRLADRFGRLLVLRVQ 271 (381)
T ss_pred --HHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHH-hhhHHHHHHcCcHHHHHHH
Confidence 33455555444334444445556677889999875 9999999999898888888988 6679999999999988888
Q ss_pred HHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHH
Q 011514 320 LFAACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIV 399 (484)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 399 (484)
.....++..... ..... .....+.+.+.....|...+.+
T Consensus 272 ~~~~~~~~~~~~--~~~~~---------------------------------------~~~~~l~g~~~~~~~p~~~~~~ 310 (381)
T PRK03633 272 VFVVILGSIAML--SQAAM---------------------------------------APALFILGAAGFTLYPVAMAWA 310 (381)
T ss_pred HHHHHHHHHHHh--hhHHH---------------------------------------HHHHHHHHHHHHhHHHHHHHHH
Confidence 777766655442 11111 2223345555556778888989
Q ss_pred hcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHHHHHHhc
Q 011514 400 SKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMS 469 (484)
Q Consensus 400 ~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (484)
.|..|+++++...+..+...++|..+||.+.|.+.|+. +... .|.+.+.+.++..+..++.+
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~-g~~~-------~f~~~~~~~l~~~~~~~~~~ 372 (381)
T PRK03633 311 CEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNY-SDNL-------LFIMIASVSFIYLLMLLRKA 372 (381)
T ss_pred HccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CccH-------HHHHHHHHHHHHHHHHHhcc
Confidence 99999888888888888899999999999999999986 5544 45666666655555444443
No 8
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=100.00 E-value=1.1e-32 Score=270.85 Aligned_cols=371 Identities=14% Similarity=0.101 Sum_probs=277.6
Q ss_pred HHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHH
Q 011514 11 SHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTL 90 (484)
Q Consensus 11 ~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~ 90 (484)
..++...++...+.....|.++.+.++.. +.+..+.|++.+...++..+.+++.|+++||+|||+++..+.++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~ 85 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQL-------GWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLM 85 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------CCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHH
Confidence 66778889999999999999998875543 56677889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHhh---
Q 011514 91 SIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL--- 167 (484)
Q Consensus 91 ~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l--- 167 (484)
.+++.+.+.+.++ ++.+++.|+++|++. +...|...+++.|+.|+|+|++++++.+...++|..+||.+++.+
T Consensus 86 ~~~~~~~~~~~~~---~~~l~~~~~l~g~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~~ 161 (400)
T PRK11646 86 RAAGFATMAIAHE---PWLLWLSCILSGLGG-TLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQY 161 (400)
T ss_pred HHHHHHHHHHhcc---HHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999988 888899999999754 667788899999999999999999999999999999999988864
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHHHHHHhhccch
Q 011514 168 STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVT 247 (484)
Q Consensus 168 ~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (484)
+||+.|++.+...++..+...+..||.++.+.+ ++.++.++...++|.
T Consensus 162 g~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~--------------------------------~~~~~~~~~~~~~~~ 209 (400)
T PRK11646 162 DFRLVCATGAVLFVLAAAFNAWLLPAYKLSTVR--------------------------------TPVREGMTRVLRDKR 209 (400)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhCCcccccccc--------------------------------hhhHHHHHHHHcCch
Confidence 899999988877666655555556653211000 011222333556676
Q ss_pred hHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHH
Q 011514 248 LSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINM 327 (484)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~ 327 (484)
++...+..+...........+.|.|.++..+ ++.+.+.+.+..++..........++..||.+.++.+..+..+.+++.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~ 288 (400)
T PRK11646 210 FVTYVLTLTGYYMLAVQVMLMLPIMVNDIAG-SPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSM 288 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhHHhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHH
Confidence 6655544444433333445678999888744 777888888887777776664554444455666666667777777776
Q ss_pred HHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCc
Q 011514 328 FICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNE 407 (484)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~ 407 (484)
..+...++.+. +.....+.+.+.+...|...+...+.+|+++
T Consensus 289 ~~l~~~~~~~~--------------------------------------~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~ 330 (400)
T PRK11646 289 FPIGMVSNLQQ--------------------------------------LFTLICLFYIGSIIAEPARETLSASLADARA 330 (400)
T ss_pred HHHHHhhhHHH--------------------------------------HHHHHHHHHHHHHHHHccHHHHHHhcCCccc
Confidence 66665554433 1333345667777778888899999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHHHHHH
Q 011514 408 QGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLM 467 (484)
Q Consensus 408 ~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (484)
||+++|+.+....+|..+||.++|.+.|+.+++.. ....+...+++.+++......
T Consensus 331 ~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 386 (400)
T PRK11646 331 RGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQ----PELPWMMLGIIGLITLLALYW 386 (400)
T ss_pred chhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCC----cchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998633221 122445555555554444433
No 9
>PRK10489 enterobactin exporter EntS; Provisional
Probab=100.00 E-value=6.8e-33 Score=274.71 Aligned_cols=354 Identities=14% Similarity=0.108 Sum_probs=274.2
Q ss_pred hhHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHH
Q 011514 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (484)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~ 86 (484)
+|.+..++...++..++.++..+.+|.+.++. +.+..+.|++.+.+.++..+++++.|+++||+|||+++..
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~ 87 (417)
T PRK10489 16 HPAFRAVFIARFISIFGLGLLGVAVPVQIQMM--------TGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILL 87 (417)
T ss_pred CCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH--------HCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEe
Confidence 45666777788899999999999999998876 3345678999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHh-----ccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHH
Q 011514 87 PLTLSIIPLAILAY-----RRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGT 161 (484)
Q Consensus 87 ~~~~~~i~~~~~~~-----~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~ 161 (484)
+..+.+++.+..+. .++ ++.+++.|++.|++. +...+...+++.|+.|+++|+++.++.+...++|..+||
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 163 (417)
T PRK10489 88 ARGTCGLGFIGLALNAFLPEPS---LLAIYLLGLWDGFFG-SLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISP 163 (417)
T ss_pred hHHHHHHHHHHHHHHHHcCCCc---HHHHHHHHHHHHHHH-HHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHH
Confidence 88887777665542 345 678889999999754 666678899999999999999999999999999999999
Q ss_pred HhhHh----hhhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHH
Q 011514 162 LAARF----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRD 237 (484)
Q Consensus 162 ~l~~~----l~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (484)
.+++. .+|++.|++.++..++..+. ...+||++++++++ ++..++.++
T Consensus 164 ~l~g~l~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~---------------------------~~~~~~~~~ 215 (417)
T PRK10489 164 ALGGLLIAAGGVAWNYGLAAAGTFITLLP-LLRLPALPPPPQPR---------------------------EHPLRSLLA 215 (417)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHH-HHhCCCCCCCCccc---------------------------ccchHHHHH
Confidence 98876 37899998887666555443 44567654322111 001112334
Q ss_pred HHHHhhccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHH
Q 011514 238 LICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLS 317 (484)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~ 317 (484)
.++..+++|.++...+..++... ......+.|.|.++.+|.++.+.+.+.+..+++..++. ++.+++.||.++++.+.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~-~~~~~l~~~~~~~~~l~ 293 (417)
T PRK10489 216 GFRFLLASPVVGGIALLGGLLTM-ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGA-LTSGWLAHSARPGLLML 293 (417)
T ss_pred HHHHHHcChHHHHHHHHHHHHHH-HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHH-HHHHHhhhccCcchHHH
Confidence 45556677776665555444332 34567788999999889999999999999999888888 67799999977777777
Q ss_pred HhHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHH
Q 011514 318 LGLFAACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRS 397 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 397 (484)
.+..+..++.+.+.+.++.+. ......+.+++.+...+...+
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~--------------------------------------~~~~~~~~g~~~~~~~~~~~~ 335 (417)
T PRK10489 294 LSTLGSFLAVGLFGLMPMWIL--------------------------------------AVLCLALFGYLSAISSLLQYT 335 (417)
T ss_pred HHHHHHHHHHHHHHccchHHH--------------------------------------HHHHHHHHHHHHHHHHHHHHH
Confidence 777777777666655544333 134444667777777777788
Q ss_pred HHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 011514 398 IVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKG 441 (484)
Q Consensus 398 ~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~ 441 (484)
++++..|++.||+++|+.+...++|..+||.+.|.+.+.. +..
T Consensus 336 ~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~-g~~ 378 (417)
T PRK10489 336 LLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMM-TPV 378 (417)
T ss_pred HHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHh-chh
Confidence 9999999999999999999999999999999999999986 443
No 10
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.2e-33 Score=261.10 Aligned_cols=370 Identities=14% Similarity=0.097 Sum_probs=287.9
Q ss_pred hhHHHHHHHHHHHHHHHHHh----hHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchh
Q 011514 7 IKTLSHLFVTVFLWGFATMM----VVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKA 82 (484)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~----~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~ 82 (484)
+|..+-++.+.++...++.. ..-..|.+.+|. +.+..+.|++.+.+.+.+.++..+.|.++||.+.|+
T Consensus 24 ~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~--------~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~ 95 (448)
T COG2271 24 KRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDG--------GLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRY 95 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhc--------CCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCce
Confidence 44445556666666665544 445566666553 466678899999999999999999999999999999
Q ss_pred HhHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHH
Q 011514 83 MLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTL 162 (484)
Q Consensus 83 ~l~~~~~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~ 162 (484)
.+..++++.++..++++++++ ++.+.+..+++|.+. |.-.|.+...++.|++++|||+..++++.+.++|..+.|.
T Consensus 96 fm~~gLilsai~nil~Gfs~s---~~~~~~l~~lng~fQ-g~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~ 171 (448)
T COG2271 96 FMAFGLILSAIVNILFGFSPS---LFLFAVLWVLNGWFQ-GMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPL 171 (448)
T ss_pred eehHHHHHHHHHHHHHhhhhH---HHHHHHHHHHHHHHh-cCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHH
Confidence 999999999999999999999 899999999999877 6666889999999999999999999999999999888887
Q ss_pred hh--Hh----hhhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchH
Q 011514 163 AA--RF----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIR 236 (484)
Q Consensus 163 l~--~~----l~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (484)
+. +. .+||..|++.++++++..++.++..+|+|+...-++-+ +.+.+..+.. +++.+++..+.+
T Consensus 172 ~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie-------~~~~d~~e~~---~~~~~~~~ls~~ 241 (448)
T COG2271 172 VALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIE-------EYRGDPLEIY---EEEKENEGLTAW 241 (448)
T ss_pred HHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCHH-------HhhcCchhhh---hhhccCCCccHH
Confidence 77 54 27999999999999999999999999998765432100 0000000000 111111112333
Q ss_pred -HHHHHhhccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhh--cch
Q 011514 237 -DLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPIL--GEA 313 (484)
Q Consensus 237 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--g~~ 313 (484)
...+.+.+||.+|.+.+..++.....++...+.|.|+.|..|+|..++++..+.+-.+++.+. ++.|+++||+ |||
T Consensus 242 ~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~-Ll~GwlSDklfkgrR 320 (448)
T COG2271 242 QIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGT-LLAGWLSDKLFKGRR 320 (448)
T ss_pred HHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHH-HHHHHHHHHhccccc
Confidence 345668899999999999999999999999999999999999999999999999999999999 7789999985 555
Q ss_pred HHH-HHhHHHHHHHHHHHhhccch--hhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhh
Q 011514 314 KLL-SLGLFAACINMFICSISWSA--WVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVF 390 (484)
Q Consensus 314 ~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 390 (484)
... ++.++...++...+...++. +. ..+....+|+....
T Consensus 321 ~p~~~i~~~~i~~~~~~~w~~~~~~~~l--------------------------------------~~~~l~~iGf~IyG 362 (448)
T COG2271 321 GPMALIFMLLITASLVLYWLAPNGSYLL--------------------------------------DAILLFIIGFLIYG 362 (448)
T ss_pred chHHHHHHHHHHHHHHHHHcCCCccHHH--------------------------------------HHHHHHHHHHHHhh
Confidence 554 34444455555555555543 22 13344456666555
Q ss_pred hhhHHHHHHhcccCCCchhHHHHHHHHHHHH-HHHHHHHHHHHHHHhh
Q 011514 391 ATPSFRSIVSKQVGPNEQGKAQGCISGISSF-ANIVSPLIFSPLTALF 437 (484)
Q Consensus 391 ~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~l-g~~~gp~i~g~l~~~~ 437 (484)
..-..-....|.+|++..|++.|+...+.++ |...+....|.+.|.+
T Consensus 363 PqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~ 410 (448)
T COG2271 363 PQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTW 410 (448)
T ss_pred HHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecC
Confidence 5556666778999999999999999999999 8888888888888763
No 11
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=100.00 E-value=1e-32 Score=270.75 Aligned_cols=353 Identities=11% Similarity=0.035 Sum_probs=261.0
Q ss_pred HhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHHHHHHHHHHHhccch
Q 011514 25 MMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSI 104 (484)
Q Consensus 25 ~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~i~~~~~~~~~~~ 104 (484)
....|.+|.+.+|+ +.+..+.|++.+.+.++..+++++.|+++||+|||+++..+..+.+++.+.++++++
T Consensus 26 ~~~~~~lp~i~~~~--------~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~- 96 (393)
T PRK09705 26 TSVGPLLPQLRQAS--------GMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQ- 96 (393)
T ss_pred hccchhHHHHHHHh--------CCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcc-
Confidence 55678899888776 566677899999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHh-----hhhHHHHHHHHHH
Q 011514 105 SFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF-----LSTTSAFQAATIV 179 (484)
Q Consensus 105 ~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~-----l~~~~~f~~~~~~ 179 (484)
++.+++.|+++|++. +...+...+++.|++| ++|+++++.+..+...|..+|+.+++. .+||..+...++.
T Consensus 97 --~~~ll~~r~l~Gig~-~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~ 172 (393)
T PRK09705 97 --SALLLSSALLGGVGI-GIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALP 172 (393)
T ss_pred --hHHHHHHHHHHHhHH-HHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 888999999999865 6666788899999987 789999999998888888888777655 2799887766544
Q ss_pred HHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHHHHHHhhccchhHHHHHHHHHHh
Q 011514 180 SMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSG 259 (484)
Q Consensus 180 ~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (484)
.++.. ..++...+.+++++++ + + + +.++ ..++++.+...+..++..
T Consensus 173 ~~~~~-~~~~~~~~~~~~~~~~------------------~------~--~---~~~~----~l~~~~~~~l~~~~~~~~ 218 (393)
T PRK09705 173 AVVAL-FAWWWQSAREVASSHK------------------T------T--T---TPVR----VVFTPRAWTLGVYFGLIN 218 (393)
T ss_pred HHHHH-HHHHHHhcCCCccccC------------------C------C--c---CCcc----cccCHhHHHHHHHHHHHH
Confidence 43332 2222222211110000 0 0 0 0011 223455565666666666
Q ss_pred chhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhhccchhhH
Q 011514 260 LSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVI 339 (484)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (484)
..+....++.|.|+++ +|++..+.+...+..+++..+++ ++.+++.||.++|+....+..+..++...+...+....
T Consensus 219 ~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~-~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~- 295 (393)
T PRK09705 219 GGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGA-LLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLP- 295 (393)
T ss_pred HHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHH-HHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHH-
Confidence 6777788899999987 69999999999999999999998 77799999999999888887777776665543332211
Q ss_pred HHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccC-CCchhHHHHHHHHH
Q 011514 340 KIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVG-PNEQGKAQGCISGI 418 (484)
Q Consensus 340 ~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p-~~~~g~~~g~~~~~ 418 (484)
.....+.+++.+...|.......+..+ ++++|+.+|+.+..
T Consensus 296 --------------------------------------~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 337 (393)
T PRK09705 296 --------------------------------------VLWAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGI 337 (393)
T ss_pred --------------------------------------HHHHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHH
Confidence 111224566666667776666666664 57899999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHHHHHHhccCC
Q 011514 419 SSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSHTP 472 (484)
Q Consensus 419 ~~lg~~~gp~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (484)
.+++..++|.+.|++.|..++++. .|.+.+++.+.........++++
T Consensus 338 ~~~~~~~gp~~~G~l~~~~g~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 384 (393)
T PRK09705 338 GFIIAGLAPWFSGVLRSISGNYLM-------DWAFHALCVVGLMIITLRFAPAR 384 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhCCchH-------HHHHHHHHHHHHHHHHHHhcccc
Confidence 999999999999999999744443 44555555555555545454444
No 12
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=1.7e-33 Score=282.69 Aligned_cols=361 Identities=12% Similarity=0.052 Sum_probs=256.8
Q ss_pred HHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHHHHH
Q 011514 14 FVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSII 93 (484)
Q Consensus 14 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~i 93 (484)
++..++..+......+..|.+.+|+ +.+..+.|++.+.+.+++.+++++.|+++||+|||+++..+.++.++
T Consensus 35 ~~~~~~~y~~r~~~~~~~~~i~~~~--------~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~ 106 (467)
T PRK09556 35 FIGYLTMYLIRKNFKAAQNDMISTY--------GLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAI 106 (467)
T ss_pred HHHHHHHHHHhcChhhhhHHHHHhc--------CCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHH
Confidence 3344444555566777888887766 55566789999999999999999999999999999999888888777
Q ss_pred HHHHHHh-----ccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHhh-
Q 011514 94 PLAILAY-----RRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL- 167 (484)
Q Consensus 94 ~~~~~~~-----~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l- 167 (484)
.....+. +++ ++.+++.|+++|++. +...|...++++|++|+++|++++++.+...++|..+++.+...+
T Consensus 107 ~~~~~~~~~~~~~~~---~~~l~~~r~l~G~~~-~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~ 182 (467)
T PRK09556 107 CMLGFGASLGSGSVS---LGLMIALWALSGFFQ-STGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGA 182 (467)
T ss_pred HHHHHHHHHhcccch---HHHHHHHHHHHHHHH-hccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHH
Confidence 7766655 577 889999999999755 556688999999999999999999999999999999998776431
Q ss_pred ------hhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHHH-HH
Q 011514 168 ------STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDL-IC 240 (484)
Q Consensus 168 ------~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 240 (484)
+||..|.+.+++.++..+..++..+|+|++.+..++++.. .+..+ .+++ ..+++..+.++. .+
T Consensus 183 ~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~----~~~~~-~~~~-----~~~~~~~~~~~~~~~ 252 (467)
T PRK09556 183 NYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWGKAEEIF----GEPIS-EEDK-----ETESTDMTKWQIFVE 252 (467)
T ss_pred HhhccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCCChhhcc----cCccc-hhhh-----ccccccCcHHHHHHH
Confidence 4888888888777776666666667765432211110000 00000 0000 000011112222 23
Q ss_pred HhhccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhH
Q 011514 241 LLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGL 320 (484)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~ 320 (484)
...++|.++...+..++......+...+.|.|+++.+|++..+.+...+...++..++. ++.|+++||+++|+......
T Consensus 253 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~-~~~G~lsDr~g~r~~~~~~~ 331 (467)
T PRK09556 253 YVLKNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGS-LLWGWLSDLANGRRALVACI 331 (467)
T ss_pred HHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHCCCchHHHHH
Confidence 35678889988888888877777888899999999899999999999888888888888 77799999999988765544
Q ss_pred HHHHHHHHHHh--hccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHH
Q 011514 321 FAACINMFICS--ISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSI 398 (484)
Q Consensus 321 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 398 (484)
....++..... ...+.+. .....++.|.+...........
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~--------------------------------------~~~~~~~~G~~~~~~~~~~~~~ 373 (467)
T PRK09556 332 ALALIIFTLGVYQHATSEYM--------------------------------------YLASLFALGFLVFGPQLLIGVA 373 (467)
T ss_pred HHHHHHHHHHHHHhcCcHHH--------------------------------------HHHHHHHHHHHHhhHHHHHHHH
Confidence 43333322221 1122212 1122223443322222233456
Q ss_pred HhcccCCCchhHHHHHHHHHHHH-HHHHHHHHHHHHHH
Q 011514 399 VSKQVGPNEQGKAQGCISGISSF-ANIVSPLIFSPLTA 435 (484)
Q Consensus 399 ~~~~~p~~~~g~~~g~~~~~~~l-g~~~gp~i~g~l~~ 435 (484)
..|..|++.+|++.|+.+...++ |..++|.+.|.+.|
T Consensus 374 ~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~ 411 (467)
T PRK09556 374 AVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIAD 411 (467)
T ss_pred HHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhc
Confidence 67999999999999999999997 77999999999999
No 13
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=2.5e-32 Score=275.53 Aligned_cols=370 Identities=15% Similarity=0.096 Sum_probs=252.1
Q ss_pred hhHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHH-HHHHHHHHHHHHHhhhhhcccccCchhHhH
Q 011514 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGF-QQAIIGLGTLVMMPVIGNLSDQYGRKAMLT 85 (484)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~-~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~ 85 (484)
++......++.+++.++..++....|.+.+++. ++.++ .. .....+ ..++..++..++++++|+++||+|||+++.
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~-~~~~~-~~-~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~ 91 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGVYGFVAYALGKVFF-PGADP-SV-QMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILA 91 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CCCCc-HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHH
Confidence 445566678899999999998888887776653 22222 11 111122 358888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccchhhH-----HHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHH
Q 011514 86 LPLTLSIIPLAILAYRRSISFF-----YAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCG 160 (484)
Q Consensus 86 ~~~~~~~i~~~~~~~~~~~~~~-----~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig 160 (484)
.+.++.+++.+++++++++... ..+++.|+++|++. |...+...++++|++|+++|+++.++...+..+|..+|
T Consensus 92 ~~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~-g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg 170 (490)
T PRK10642 92 ITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSV-GGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLG 170 (490)
T ss_pred HHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHh-HhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHH
Confidence 9999999999999999994211 24889999999866 66678899999999999999999999998888888877
Q ss_pred HHhhH------------hhhhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcc
Q 011514 161 TLAAR------------FLSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPV 228 (484)
Q Consensus 161 ~~l~~------------~l~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (484)
+.+.. ..|||++|++.+++.++ .++....+||+|+..+.+++.+ +.+++ .. .
T Consensus 171 ~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~-~~~~~~~~~esp~~~~~~~~~~-----------~~~~~-~~---~ 234 (490)
T PRK10642 171 AGVVVLISTIVGEANFLDWGWRIPFFIALPLGII-GLYLRHALEETPAFQQHVDKLE-----------QGDRE-GL---Q 234 (490)
T ss_pred HHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHH-HHHHHHcCCCChhHHHHHHhhh-----------hhccc-cc---c
Confidence 75432 25899999997755544 4444566888876432110000 00000 00 0
Q ss_pred cCCCCchHHHHHHhhccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhh
Q 011514 229 CKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAP 308 (484)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 308 (484)
+++..++++.++. ..+.+.......++....++....+.|.|+++.+|++..+.+.......++..++. ++.++++|
T Consensus 235 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~-~~~g~l~d 311 (490)
T PRK10642 235 DGPKVSFKEIATK--HWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQ-PVMGLLSD 311 (490)
T ss_pred ccccCCHHHHHHH--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 0111234443221 11222222233344455666778899999988889988877777677777777777 67799999
Q ss_pred hhcchHHHHHhHHHHHHHHHH-Hhh--ccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHH
Q 011514 309 ILGEAKLLSLGLFAACINMFI-CSI--SWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFS 385 (484)
Q Consensus 309 ~~g~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 385 (484)
|+|||+.+..+.....+.... +.. ..+... +.....+.+
T Consensus 312 r~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------~~~~~~~~g 353 (490)
T PRK10642 312 RFGRRPFVILGSVALFVLAIPAFILINSNVIGL--------------------------------------IFAGLLMLA 353 (490)
T ss_pred HhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHH--------------------------------------HHHHHHHHH
Confidence 999999887776543322221 211 111122 122223444
Q ss_pred HhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 011514 386 VLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 437 (484)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~ 437 (484)
++.+........+..+.+|++.||++.|..+....+++.++|.+.+.+.+..
T Consensus 354 ~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~ 405 (490)
T PRK10642 354 VILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVEST 405 (490)
T ss_pred HHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5444555556677788999999999999877777788889999999998764
No 14
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=100.00 E-value=2.1e-32 Score=270.67 Aligned_cols=379 Identities=16% Similarity=0.186 Sum_probs=285.0
Q ss_pred chhhHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHh
Q 011514 5 KEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAML 84 (484)
Q Consensus 5 ~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l 84 (484)
+|+|....++++.++...+.+...|.+|.+.++. |.++.+....+.|++.+++.++..++++++|+++||+|||+.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~ 87 (408)
T PRK09874 11 NWKRNLTVAWLGCFLTGAAFSLVMPFLPLYVEQL---GVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIML 87 (408)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHh---CCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHH
Confidence 3677788888999999999999999999999886 5544343344679999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhh
Q 011514 85 TLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAA 164 (484)
Q Consensus 85 ~~~~~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~ 164 (484)
..+.+..+++.+++.+.++ ++.+++.|++.|+++ +. .+...+++.|..|+++|++++++......+|..++|.++
T Consensus 88 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 162 (408)
T PRK09874 88 LRSALGMGIVMVLMGLAQN---IWQFLILRALLGLLG-GF-VPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAG 162 (408)
T ss_pred HHHHHHHHHHHHHHHHHhh---HHHHHHHHHHHHHhh-hh-HHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999888888 888999999999754 44 477888999999999999999999999999999999888
Q ss_pred Hh----hhhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHHHHH
Q 011514 165 RF----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLIC 240 (484)
Q Consensus 165 ~~----l~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (484)
+. .+||+.|++.+++.++..+...+.+||++++.+++ +..+.++..+
T Consensus 163 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~ 213 (408)
T PRK09874 163 GLLADSYGLRPVFFITASVLFLCFLVTLFCIRENFQPVSKK-----------------------------EMLHMREVVT 213 (408)
T ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccCcccccch-----------------------------hhhHHHHHHH
Confidence 75 48999999998887777777767677754321111 0011223233
Q ss_pred HhhccchhHH-HHHHHHHHhchhhhhHHHHHHHHhhhcCcChh---hHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHH
Q 011514 241 LLRSSVTLSQ-AAVVAFFSGLSEGGMQASFLYFLKAQFHFNKN---QFADLMLIAGLAGTISQLLFMPLLAPILGEAKLL 316 (484)
Q Consensus 241 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~ 316 (484)
.+ ++++.+. .....+...........+.+.|..+..+.... ..+.+....+++..++. ...+++.||+++|+.+
T Consensus 214 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~-~~~g~l~dr~g~~~~~ 291 (408)
T PRK09874 214 SL-KNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSA-PRLGKLGDRIGPEKIL 291 (408)
T ss_pred hC-cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhccccchhH
Confidence 23 3444433 33333444444455667788888776332221 23455556667777777 6669999999999998
Q ss_pred HHhHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHH
Q 011514 317 SLGLFAACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFR 396 (484)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 396 (484)
..+..+..++.+.....++.+. +.....+.+++.+...+...
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~--------------------------------------~~~~~~~~g~~~~~~~~~~~ 333 (408)
T PRK09874 292 ITALIFSVLLLIPMSFVQTPLQ--------------------------------------LGILRFLLGAADGALLPAVQ 333 (408)
T ss_pred HHHHHHHHHHHHHHHHhccHHH--------------------------------------HHHHHHHHHhhhHhhHHHHH
Confidence 8888777766666555554444 13344567888888888888
Q ss_pred HHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHHHHHHh
Q 011514 397 SIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMM 468 (484)
Q Consensus 397 ~~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (484)
+...+..|++++|+.++..+....+|..+||.+.|.+.+.. +++. .|.+.+++.+++.+..++.
T Consensus 334 ~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~-g~~~-------~f~~~~~~~l~~~~~~~~~ 397 (408)
T PRK09874 334 TLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANY-GFRA-------VFLVTAGVVLFNAVYSWNS 397 (408)
T ss_pred HHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhc-chhH-------HHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999875 5544 4566666666655555443
No 15
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=100.00 E-value=1.3e-32 Score=277.73 Aligned_cols=380 Identities=16% Similarity=0.083 Sum_probs=293.4
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhH
Q 011514 4 EKEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAM 83 (484)
Q Consensus 4 ~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~ 83 (484)
.+++..+..++++.++..++..++...+|.+.+|+ +.+..+.+|+.+.+.++...+.+++|+++||+|||++
T Consensus 2 ~~~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l--------~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~ 73 (495)
T PRK14995 2 FRQWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTL--------GASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRL 73 (495)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------CCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 34455677888899999999999999999998877 4444566899999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcC-CccchhHHHHHHHHHHHhHHhHHHH
Q 011514 84 LTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNI-SERQRASAFGILLGVLSASFVCGTL 162 (484)
Q Consensus 84 l~~~~~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~ig~~ 162 (484)
+..+.++..++.+++++++| ++.++++|+++|++. +...|.....+.+.+ |+++|++++++......+|..+||.
T Consensus 74 l~~~~~~~~~~~~~~~~a~~---~~~li~~r~l~G~g~-~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~ 149 (495)
T PRK14995 74 LMLGGTLFGLASLAAAFSPT---ASWLIATRALLAIGA-AMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPL 149 (495)
T ss_pred HHHHHHHHHHHHHHHHHcCC---HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999 899999999999865 666677777776765 6899999999999999999999999
Q ss_pred hhHhh----hhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccc---------cccccCCCCCCCCc-----
Q 011514 163 AARFL----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITE---------ETEGVNQNESNSPV----- 224 (484)
Q Consensus 163 l~~~l----~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~----- 224 (484)
+++.+ +||+.|++...+.++..++..+.+||++++++++.|..+.... ...+..+.......
T Consensus 150 lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 229 (495)
T PRK14995 150 VGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTL 229 (495)
T ss_pred HHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHH
Confidence 99874 8999999998888887777777788865433222111111000 00000000000000
Q ss_pred ----------cCcccCCCCchHHHHHHhhccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHH
Q 011514 225 ----------KIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLA 294 (484)
Q Consensus 225 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 294 (484)
...+.+..++..+ .+ ++++|.+....+..++......+...+.|.|+++.+|+++.+.|..+....++
T Consensus 230 ~~~~~~l~~f~~~e~~~~~p~~~-~~-lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~ 307 (495)
T PRK14995 230 LTGALLLGLFIRTQLAASRPMID-MR-LFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVA 307 (495)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcC-HH-HhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 0000111112222 12 45678887777777777777777788999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhhcc---chhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHh
Q 011514 295 GTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISW---SAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILK 371 (484)
Q Consensus 295 ~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 371 (484)
..++. .+.|++.||+|+|+.+..+..+..++...+.... +.+.
T Consensus 308 ~~~~~-~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~--------------------------------- 353 (495)
T PRK14995 308 SGFSG-PIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQWQ--------------------------------- 353 (495)
T ss_pred HHHHH-HHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCchHH---------------------------------
Confidence 99988 7779999999999988888887777766554332 1222
Q ss_pred hhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 011514 372 SIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 436 (484)
Q Consensus 372 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~ 436 (484)
......+.|++.+...+.......+.+|++++|.+.++.++..++|+.+|+.+.|.+++.
T Consensus 354 -----~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~~ 413 (495)
T PRK14995 354 -----AWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLSR 413 (495)
T ss_pred -----HHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 133455778888888888888889999999999999999999999999999999999875
No 16
>TIGR00893 2A0114 d-galactonate transporter.
Probab=100.00 E-value=4.6e-33 Score=273.88 Aligned_cols=378 Identities=16% Similarity=0.133 Sum_probs=271.5
Q ss_pred HHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHHHHHHHHHH
Q 011514 19 LWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAIL 98 (484)
Q Consensus 19 ~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~i~~~~~ 98 (484)
+..++.....+..|.+.+++ +.+..+.|++.+++.++..++.++.|+++||+|||+++..+.++.+++..++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~--------g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~ 76 (399)
T TIGR00893 5 INYLDRANLSFAAPMLQEDL--------GLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQ 76 (399)
T ss_pred HHHHHHHhhhHhHHHHHHhh--------CCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHH
Confidence 34455566666677766555 4455677999999999999999999999999999999999999999999999
Q ss_pred HhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHh----hhhHHHHH
Q 011514 99 AYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF----LSTTSAFQ 174 (484)
Q Consensus 99 ~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~----l~~~~~f~ 174 (484)
+++++ ++.+++.|++.|++. +...+...+++.|++|+|+|++++++.+...++|..+||.+++. .+||+.|+
T Consensus 77 ~~~~~---~~~~~~~~~l~g~~~-~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~ 152 (399)
T TIGR00893 77 AFAGA---YVSLYILRVLLGAAE-APFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFI 152 (399)
T ss_pred HHHcC---HHHHHHHHHHHHHHH-HhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHH
Confidence 99998 899999999999765 77778999999999999999999999999999999999988875 48999999
Q ss_pred HHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHHHHHHhhccchhHHHHHH
Q 011514 175 AATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVV 254 (484)
Q Consensus 175 ~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (484)
+.+++.++..+...+..||++++++..+++++....+. .. ++. +.+++.+++..+ .+...++|+++...+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 223 (399)
T TIGR00893 153 IEGVLGIIWGVLWLKFIPDPPQKAKWLTEEEKYIVVGG---LL-AEQ-QGKGPSTPKKYQ----IKELLKDRRVWGLALG 223 (399)
T ss_pred HHHHHHHHHHHHhhheecCCCCccccCCHHHHhhcchh---hc-ccc-ccccccCCCccc----hHHHhcCHHHHHHHHH
Confidence 98888777777666667776543322111100000000 00 000 000011111112 2235667888888888
Q ss_pred HHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchH--HHHHhHHHHH----HHHH
Q 011514 255 AFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAK--LLSLGLFAAC----INMF 328 (484)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~--~~~~~~~~~~----~~~~ 328 (484)
.++..........+.|.|+++.+|.++.+.+...+...+...++. ++.+++.||+++|+ .......... ....
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (399)
T TIGR00893 224 QFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGM-ILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLL 302 (399)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHH-HHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHH
Confidence 888888888889999999999889999999999999999998888 77799999999886 1111111111 1111
Q ss_pred HHhhc--cchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCC
Q 011514 329 ICSIS--WSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPN 406 (484)
Q Consensus 329 ~~~~~--~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~ 406 (484)
..... +..+. .......+.+.....+...++.+|..|++
T Consensus 303 ~~~~~~~~~~~~---------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (399)
T TIGR00893 303 MFATNYVNIPYA---------------------------------------ALALVALGFFGLGAGAIGWALISDNAPGN 343 (399)
T ss_pred HHHhccchhHHH---------------------------------------HHHHHHHHHhchhhhhHHHHHHHhhcChh
Confidence 11111 11111 22222233333336788899999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHHH
Q 011514 407 EQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQ 464 (484)
Q Consensus 407 ~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (484)
+||++.|+.+...++++.++|.+.|.+.|..+++.. .+.+.+++.+++.+.
T Consensus 344 ~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~-------~~~~~~~~~~~~~~~ 394 (399)
T TIGR00893 344 IAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAG-------ALMVVAALALIGALS 394 (399)
T ss_pred HHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhH-------HHHHHHHHHHHHHHH
Confidence 999999999999999999999999999997622443 345555555544443
No 17
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=100.00 E-value=2.8e-32 Score=268.89 Aligned_cols=372 Identities=11% Similarity=0.118 Sum_probs=270.1
Q ss_pred chhhHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHh
Q 011514 5 KEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAML 84 (484)
Q Consensus 5 ~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l 84 (484)
|++|++..+++..++..++.++..|.+|.+.++.+ +.+..+.|++.+++.++..+++++.|+++||+|||+++
T Consensus 12 ~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~-------g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l 84 (399)
T PRK05122 12 RLTLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQL-------GFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAV 84 (399)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------CccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchH
Confidence 45778888999999999999999999999875543 45566789999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhc---cch--hhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhH
Q 011514 85 TLPLTLSIIPLAILAYR---RSI--SFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVC 159 (484)
Q Consensus 85 ~~~~~~~~i~~~~~~~~---~~~--~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~i 159 (484)
..+.++.+++.+.+.++ ++. ..++.+++.|+++|++. +...+...+++.|+.|+|+|++++++.+.....|..+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~-~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~ 163 (399)
T PRK05122 85 VFGLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGE-SLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAI 163 (399)
T ss_pred HHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhH-HhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHH
Confidence 99999888877665543 221 12567899999999755 6667788899999999999999999999999999999
Q ss_pred HHHhhHh----hhhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCch
Q 011514 160 GTLAARF----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSI 235 (484)
Q Consensus 160 g~~l~~~----l~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (484)
||.+++. .+|+..+++..++..+..+.. ...|++++ ++ +++.+.
T Consensus 164 g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~----------------------------~~~~~~ 211 (399)
T PRK05122 164 GAPLGVLLYHWGGLAGLGLLIMLLALLGLLLA-RPRPAVPP---VK----------------------------GERLPF 211 (399)
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHHHHHHH-hcCCCCCC---CC----------------------------ccchhH
Confidence 9888775 478988877665543332221 11121110 00 000112
Q ss_pred HHHHHHhhccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHH
Q 011514 236 RDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKL 315 (484)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~ 315 (484)
++.++. .+.......+..+.......+.+.|.++. |++ +.+...+..+++..++. +..+++.||+++|+.
T Consensus 212 ~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~-~~~g~l~~r~~~~~~ 281 (399)
T PRK05122 212 RRVLGR------VWPYGMGLALASIGFGTIATFITLYYAAR-GWD--GAALALTLFGVAFVGAR-LLFGNLINRLGGLRV 281 (399)
T ss_pred HHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHc-ccc--cchHHHHHHHHHHHHHH-HHHHHHHHHhccHHH
Confidence 222211 11112222333344455667778887764 653 34566677777778887 667999999999998
Q ss_pred HHHhHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHH
Q 011514 316 LSLGLFAACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSF 395 (484)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 395 (484)
+..+..+..++...+...++.+. ......+.|++.+...+..
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------~~~~~~l~G~~~~~~~~~~ 323 (399)
T PRK05122 282 AIVSLLVEILGLLLLWLAPSPWM--------------------------------------ALIGAALTGFGFSLVFPAL 323 (399)
T ss_pred HHHHHHHHHHHHHHHHHhccHHH--------------------------------------HHHHHHHHHHhHHHHHHHH
Confidence 88888887777776666554443 1344557788888788887
Q ss_pred HHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHHHHHHhccCC
Q 011514 396 RSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSHTP 472 (484)
Q Consensus 396 ~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (484)
.....+..|+++||++.|+.+...++|..++|.+.|.+.+.. +++. .+.+.+++.+++.+.....++++
T Consensus 324 ~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~-g~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 392 (399)
T PRK05122 324 GVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWF-GYPS-------IFLAAALAALLGLALTWLLYRRA 392 (399)
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHH-------HHHHHHHHHHHHHHHHHHhcccc
Confidence 788889999999999999999999999999999999999875 5444 44566666666665555554443
No 18
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=1e-32 Score=283.69 Aligned_cols=398 Identities=15% Similarity=0.124 Sum_probs=278.6
Q ss_pred HHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHHH
Q 011514 12 HLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLS 91 (484)
Q Consensus 12 ~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~ 91 (484)
.+.++.+...+....+.+.+|.+..++ +.+..+.|++.+++.++.+++++++|+++||+|||+.++++.++.
T Consensus 171 i~~l~~~~~g~d~~~is~ilp~i~~~~--------gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~ 242 (742)
T TIGR01299 171 VLGLALMADGVEVFVVGFVLPSAEKDL--------CIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVN 242 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 334444555566666778888887766 445567799999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHh-----
Q 011514 92 IIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF----- 166 (484)
Q Consensus 92 ~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~----- 166 (484)
+++.++++++++ ++.++++|++.|++. +...|...+++.|++|+++|++.+++......+|.++++.++..
T Consensus 243 ~i~~ll~afa~s---~~~llv~R~l~G~g~-g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~ 318 (742)
T TIGR01299 243 GFFAFFSSFVQG---YGFFLFCRLLSGFGI-GGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHY 318 (742)
T ss_pred HHHHHHHHHHhh---HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999 889999999999866 66668999999999999999999999999999999998876532
Q ss_pred ------------hhhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCC-------C--------
Q 011514 167 ------------LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQN-------E-------- 219 (484)
Q Consensus 167 ------------l~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~-------~-------- 219 (484)
.+||+.+++.++.. +..++..+++||+|++...+++.+++.....+....+ .
T Consensus 319 G~~~~~g~~~~~~gWR~l~~i~~lp~-ll~ll~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~ 397 (742)
T TIGR01299 319 GWSFQMGSAYQFHSWRVFVIVCAFPC-VFAIGALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHI 397 (742)
T ss_pred cchhccccccccccHHHHHHHHHHHH-HHHHHHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHH
Confidence 25899888877554 4445566779999986433322222211110000000 0
Q ss_pred ---CCCC-----c-cCcc--c----CC---CCchHHHHHHhhcc---chhHHHHHHHHHHhchhhhhHHHHHHHHhhh--
Q 011514 220 ---SNSP-----V-KIPV--C----KK---IPSIRDLICLLRSS---VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQ-- 276 (484)
Q Consensus 220 ---~~~~-----~-~~~~--~----~~---~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 276 (484)
+..+ . .... . +. .......++.++++ ++.+.+.+..++..+.+++...++|..+++.
T Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~~~yygl~~w~P~~~~~~~~ 477 (742)
T TIGR01299 398 KTIHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEVREITIKLMGVWFTLSFGYYGLSVWFPDMIKHLQA 477 (742)
T ss_pred HHhhhhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000 0 0000 0 00 00001112223332 3345566677778888889999999765431
Q ss_pred --c-----------------CcCh--------------------------------------------------------
Q 011514 277 --F-----------------HFNK-------------------------------------------------------- 281 (484)
Q Consensus 277 --~-----------------g~~~-------------------------------------------------------- 281 (484)
+ +++.
T Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~ 557 (742)
T TIGR01299 478 DDYAALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFE 557 (742)
T ss_pred HHHHhhhccccccchhccccccchhhhhccccccccchhhcccccccccccccccccceeeccccchhhhccchhhhhcc
Confidence 0 0000
Q ss_pred -------------------------------------hhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHH
Q 011514 282 -------------------------------------NQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAAC 324 (484)
Q Consensus 282 -------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~ 324 (484)
........+.+++.+++. ++.++++||+|||+++..+.++.+
T Consensus 558 ~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~-il~g~L~Dr~GRr~~l~~~~~lsa 636 (742)
T TIGR01299 558 NTDFEEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGN-IVSALLMDKIGRLRMLAGSMVLSC 636 (742)
T ss_pred ccchhhhhhhhhhhhhccccccCCccCccCCccchhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCHHHHHHHHHHHH
Confidence 011233445567777777 778999999999999999999998
Q ss_pred HHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccC
Q 011514 325 INMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVG 404 (484)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p 404 (484)
++++++++..+... +++..++.+++.+...+...++++|.+|
T Consensus 637 i~~ll~~~~~s~~~--------------------------------------ll~~~~l~g~~~~~~~~~~~a~~aEl~P 678 (742)
T TIGR01299 637 ISCFFLSFGNSESA--------------------------------------MIALLCLFGGLSIAAWNALDVLTVELYP 678 (742)
T ss_pred HHHHHHHHHccHHH--------------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 88888777665443 1333345566666777888999999999
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHHHHHHhcc
Q 011514 405 PNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSH 470 (484)
Q Consensus 405 ~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (484)
++.|++++|+.+....+|.+++|.++|.+.+. +... ++++.+++.+++.++..++++
T Consensus 679 t~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~--~~~~-------pf~i~a~~lll~~ll~~~LPE 735 (742)
T TIGR01299 679 SDKRATAFGFLNALCKAAAVLGILIFGSFVGI--TKAA-------PILFASAALACGGLLALKLPD 735 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhHH-------HHHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999988875 2222 456666666666666666643
No 19
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=100.00 E-value=1.3e-31 Score=262.60 Aligned_cols=335 Identities=11% Similarity=0.129 Sum_probs=253.6
Q ss_pred HHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHHHHHHHHHHH
Q 011514 20 WGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILA 99 (484)
Q Consensus 20 ~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~i~~~~~~ 99 (484)
.........+.+|.+.+++ +.+..+.|+..+.+.++..+++++.|+++||+|||+++..+.++.+++.+++.
T Consensus 32 ~~~~~~~~~~~l~~~~~~~--------g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~ 103 (394)
T PRK10213 32 LIIVEFLPVSLLTPMAQDL--------GISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVS 103 (394)
T ss_pred HHHHHHHHHhhHHHHHHHc--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHH
Confidence 3334445566788877665 56667789999999999999999999999999999999999999999999999
Q ss_pred hccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHh----hhhHHHHHH
Q 011514 100 YRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF----LSTTSAFQA 175 (484)
Q Consensus 100 ~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~----l~~~~~f~~ 175 (484)
++++ ++.+++.|+++|++. +...|...+++.|++|+|+|++++++.....++|..+||.+++. ++||+.|++
T Consensus 104 ~~~~---~~~l~~~r~l~G~~~-g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~ 179 (394)
T PRK10213 104 FANS---FSLLLIGRACLGLAL-GGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNA 179 (394)
T ss_pred HHCh---HHHHHHHHHHHHHhh-HHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHH
Confidence 9998 899999999999765 66778999999999999999999999999999999999988876 489999999
Q ss_pred HHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHHHHHHhhccchhHHHHHHH
Q 011514 176 ATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVA 255 (484)
Q Consensus 176 ~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (484)
.+++.++..+......||+++++++ ..++.+ ...++|.++...+..
T Consensus 180 ~~~l~~~~~l~~~~~~p~~~~~~~~------------------------------~~~~~~----~~l~~~~~~~~~~~~ 225 (394)
T PRK10213 180 AAVMGVLCIFWIIKSLPSLPGEPSH------------------------------QKQNTF----RLLQRPGVMAGMIAI 225 (394)
T ss_pred HHHHHHHHHHHHHHHCCCCCccccc------------------------------chhHHH----HHhcCHHHHHHHHHH
Confidence 8877766555555556664321100 001111 245567777666655
Q ss_pred HHHhchhhhhHHHH-HHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhhcc
Q 011514 256 FFSGLSEGGMQASF-LYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISW 334 (484)
Q Consensus 256 ~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 334 (484)
++.........++. |.|.+ .+|+++.+.+..+...+++..++. ++.+++.||.+++.............+.+....+
T Consensus 226 ~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~g~~~~~~~~~~iig~-~~~~~l~~r~~~~~l~~~~~~~~~~~~~l~~~~~ 303 (394)
T PRK10213 226 FMSFAGQFAFFTYIRPVYMN-LAGFGVDGLTLVLLSFGIASFVGT-SLSSFILKRSVKLALAGAPLVLAVSALVLTLWGS 303 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHH-hcCCChhHHHHHHHHHHHHHHHHH-HHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhh
Confidence 55555555555665 55554 569999999999999999999998 7779999995444333333333333344433333
Q ss_pred chhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHH
Q 011514 335 SAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGC 414 (484)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~ 414 (484)
+.+. +.....+.|++.+...+...+.+++..| +++++..+.
T Consensus 304 ~~~~--------------------------------------~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 344 (394)
T PRK10213 304 DKIV--------------------------------------ATGVAIIWGLTFALVPVGWSTWITRSLA-DQAEKAGSI 344 (394)
T ss_pred hHHH--------------------------------------HHHHHHHHHHHHHhhhHHHHHHHHHHCc-ccHHHHHHH
Confidence 3333 1334557788888888888888998887 667788888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 011514 415 ISGISSFANIVSPLIFSPLTALFLSKGA 442 (484)
Q Consensus 415 ~~~~~~lg~~~gp~i~g~l~~~~~~~~~ 442 (484)
.....++|..+||.++|.++|.. +...
T Consensus 345 ~~~~~~lg~~~G~~l~G~l~~~~-g~~~ 371 (394)
T PRK10213 345 QVAVIQLANTCGAAIGGYALDNI-GLTS 371 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcc-Chhh
Confidence 88899999999999999999975 5443
No 20
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=100.00 E-value=6.8e-32 Score=264.62 Aligned_cols=373 Identities=12% Similarity=0.118 Sum_probs=268.4
Q ss_pred hHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHH
Q 011514 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLP 87 (484)
Q Consensus 8 ~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~ 87 (484)
|+++.++.+.++..++..+.....+...+|+ +.+....+++.+.+.+++.+..|++|+++||+|||++++.+
T Consensus 3 ~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~--------~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~ 74 (393)
T PRK11195 3 KGFYAIMAAQFFSALADNALLFAAIALLKEL--------HYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIA 74 (393)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--------CCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHH
Confidence 3567788899999998877777777776665 33345679999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHhh
Q 011514 88 LTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL 167 (484)
Q Consensus 88 ~~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l 167 (484)
.++.+++.+.+.+..+ . ++.|+++|++. +...|+..+++.|++|+|+|++++++.+...++|.++||.+++.+
T Consensus 75 ~~~~~~~~~~~~~~~~---~---~~~r~l~G~~~-a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l 147 (393)
T PRK11195 75 NGIKLLGCLLMLFGIH---P---LLAYGLVGIGA-AAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGAL 147 (393)
T ss_pred HHHHHHHHHHHHHHHH---H---HHHHHHHHHHH-HHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999888877666 3 67899999755 788899999999999999999999999999999999999999875
Q ss_pred ---hhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHHHHHHhhc
Q 011514 168 ---STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRS 244 (484)
Q Consensus 168 ---~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (484)
.|+.++.+.+...++. .+..+.+||++++++++++ +..+..++.++..+.+++
T Consensus 148 ~~~~~~~~~~i~~~~~~~~-~~~~~~l~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~l~~ 203 (393)
T PRK11195 148 ADPHAEAALAVCALIYLLA-ALFNLFIPRLGARRPGQSW-----------------------NPIALLRDFFHACRVLWR 203 (393)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHhcCCCCcccccccCC-----------------------CHHHHHHHHHHHHHHHHh
Confidence 3455555555333333 3344567776533211100 000001122233344667
Q ss_pred cchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHH
Q 011514 245 SVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAAC 324 (484)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~ 324 (484)
+|.++......++............|.|+++.+|.++.+.|...+..+++..+++ +..+++.||.++++.+..+.. .+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~-~~~~~l~~~~~~~~~~~~g~~-~~ 281 (393)
T PRK11195 204 DKLGRFSLAGTTLFWGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGA-GAAARLVTLETVLRVLPAGIL-MG 281 (393)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHH-HHHHHHhcCCcccchHHHHHH-HH
Confidence 7776665555555555555566677888998899999999999999999999998 777999999888887776643 33
Q ss_pred HHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccC
Q 011514 325 INMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVG 404 (484)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p 404 (484)
+....+.+.++.+. ......+.|++.+...+..++..++..|
T Consensus 282 ~~~~~~~~~~~~~~--------------------------------------~~~~~~~~G~~~g~~~~~~~~~~q~~~~ 323 (393)
T PRK11195 282 LVVLLMALQHSLLP--------------------------------------AYPLLILIGALGGFFVVPMNALLQHRGH 323 (393)
T ss_pred HHHHHHHHHhHHHH--------------------------------------HHHHHHHHHHhhhhhhhhHHHHHHhhCc
Confidence 33333333333222 1334446777777777878888888766
Q ss_pred CCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHHHHHHh
Q 011514 405 PNE-QGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMM 468 (484)
Q Consensus 405 ~~~-~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (484)
++. +|++.++.+..++++..++..+.+.+... +... .+.+.++..++++...+..
T Consensus 324 ~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~~--~~~~-------~~~~~~~~~~~~~~~~~~~ 379 (393)
T PRK11195 324 VLVGAGHSIAVQNFNENLAMLLMLGLYSLLVKL--GVPV-------VAVIVGFGLLVALAMALLW 379 (393)
T ss_pred ccccchhHHHHHhHHHHHHHHHHHHHHHHHHHc--CCCH-------HHHHHHHHHHHHHHHHHHH
Confidence 554 79999999999999999999999866433 4444 3344444444544444433
No 21
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=100.00 E-value=5.8e-32 Score=261.45 Aligned_cols=352 Identities=14% Similarity=0.032 Sum_probs=254.6
Q ss_pred HHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHHHHHHHHHHH
Q 011514 20 WGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILA 99 (484)
Q Consensus 20 ~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~i~~~~~~ 99 (484)
.......+.|.+|.+.+|+ +.+..+.|++.+.+.+++.+++++.|+++||+|||+++..+......+.....
T Consensus 3 ~~~~~~~~~~~lp~i~~~~--------~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~ 74 (368)
T TIGR00903 3 SQAIWVTFSPVLSLVAEDI--------DVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLL 74 (368)
T ss_pred hhHHHHHHHhhHHHHHHHh--------CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHH
Confidence 3445667888999998877 55667789999999999999999999999999999987766655555544333
Q ss_pred hccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHhh----hhHHHHHH
Q 011514 100 YRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL----STTSAFQA 175 (484)
Q Consensus 100 ~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l----~~~~~f~~ 175 (484)
..++ ++.+++.|+++|++. +.. +.....++|++|+|+|++++++.+.+..+|..+++.++..+ +||+.|++
T Consensus 75 ~~~~---~~~l~~~R~l~G~g~-~~~-~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~ 149 (368)
T TIGR00903 75 DPFN---YEWLLACQLLAALGQ-PFL-LNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIP 149 (368)
T ss_pred Hhcc---HHHHHHHHHHHHhHh-HHH-HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHH
Confidence 3367 899999999999765 554 45667779999999999999999999999999999888764 99999999
Q ss_pred HHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHHHHHHhhccchhHHHHHHH
Q 011514 176 ATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVA 255 (484)
Q Consensus 176 ~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (484)
.+++.++..++.++.+||+|++++++ .+ . ++..+.++.+.++|.++...+..
T Consensus 150 ~~~l~~~~~~~~~~~lp~~p~~~~~~----------------~~-------~-----~~~~~~~~~ll~~~~~~~~~~~~ 201 (368)
T TIGR00903 150 IAAVAAAGIILVLAALPALPFQAAEG----------------FG-------F-----KDAVKEFGALAGRKDLWIIGAIL 201 (368)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCC----------------cc-------h-----HHHHHHHHHHHcChhHHHHHHHH
Confidence 88888888888888899976543211 00 0 00011234466789999999999
Q ss_pred HHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcc---hHH-HHHhHHHHHHHHHHHh
Q 011514 256 FFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGE---AKL-LSLGLFAACINMFICS 331 (484)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~---~~~-~~~~~~~~~~~~~~~~ 331 (484)
++.......+.+++|.|+++. |++.. .+.......+.+.++. ++++||..| |+. ......+.++....+.
T Consensus 202 ~~~~~~~~~~~~wlp~~L~~~-g~s~~-~~~~~~l~~~~g~~g~----~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~ 275 (368)
T TIGR00903 202 GFGVALFDNLAIWLEAALRPA-GLEDI-AGDAVALAILAGLIGV----AVIPDRVARAGLRSIYIRAAALLIAAFFLALA 275 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHC-CCChH-HHHHHHHHHHHHHHHH----HHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999774 78865 5666666666555554 566666543 333 2223333344443444
Q ss_pred hccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHH
Q 011514 332 ISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKA 411 (484)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~ 411 (484)
...+... ......+.+++.....+..+++.+|.+|++.||++
T Consensus 276 ~~~~~~~--------------------------------------~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~ 317 (368)
T TIGR00903 276 FELNRLA--------------------------------------LFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKA 317 (368)
T ss_pred HccccHH--------------------------------------HHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcc
Confidence 3333222 12233345555666667788899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHHHHH
Q 011514 412 QGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSL 466 (484)
Q Consensus 412 ~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (484)
.|+.+..+++++.++|.+.+.+.. +... .|.+.++..+++.+...
T Consensus 318 ~G~~~~~g~~~~~~~~~~~~~~~~---~~~~-------~f~~~~~~~~i~~~~~~ 362 (368)
T TIGR00903 318 AGAIGFTSRAISVALALAAMLFIS---SAEA-------YFTFLAILITIAFAIAL 362 (368)
T ss_pred cchhhHHHHHHHHHHHHHHHHHhc---CHHH-------HHHHHHHHHHHHHHHHH
Confidence 999999999999999999988773 2111 34555555555555543
No 22
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=100.00 E-value=2.6e-32 Score=269.74 Aligned_cols=376 Identities=14% Similarity=0.170 Sum_probs=267.1
Q ss_pred hhHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHH
Q 011514 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (484)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~ 86 (484)
++.+...++..+.+.++.....+..|.+.+++ +.+..+.|++.+.+.++..+++++.|.++||+|||+++..
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--------~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~ 82 (405)
T TIGR00891 11 WNAFSAAWLGWLLDAFDFFLVALVLAEVAGEF--------GLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVT 82 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------CCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence 45566778888999999999999999988776 4455667999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHh
Q 011514 87 PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF 166 (484)
Q Consensus 87 ~~~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~ 166 (484)
+.++.+++.++++++++ ++.+++.|++.|++. +...+...+++.|+.|+++|++++++.+....+|..+++.+++.
T Consensus 83 ~~~~~~~~~~~~~~~~~---~~~l~~~~~l~G~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~ 158 (405)
T TIGR00891 83 SIVLFSAGTLACGFAPG---YITMFIARLVIGIGM-GGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSL 158 (405)
T ss_pred HHHHHHHHHHHHHHhcc---HHHHHHHHHHHHhhh-hhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999 888999999999765 66668899999999999999999999999999999999988765
Q ss_pred h----h--hHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHHHHH
Q 011514 167 L----S--TTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLIC 240 (484)
Q Consensus 167 l----~--~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (484)
+ + ||+.|++.++..++ .++....+||++++++++++.++..+ +.++..+.++ ..+ +..++.....+
T Consensus 159 l~~~~~~~w~~~f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~----~~~~~~~~~~~ 230 (405)
T TIGR00891 159 VVPVWGDGWRALFFISILPIIF-ALWLRKNIPEAEDWKEKHAGKALVRT-MVDILYGGEH--RIA----NIVMTLAAAMV 230 (405)
T ss_pred HHHhcCccHHHHHHHHHHHHHH-HHHHHHhCCCChhHHHHhhhhhhhhh-HHHHHhccch--hhh----hhhhhhhHHhh
Confidence 3 4 99999887644444 34444557776543222111000000 0000000000 000 00000000000
Q ss_pred H-hhcc-chhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHH
Q 011514 241 L-LRSS-VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSL 318 (484)
Q Consensus 241 ~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~ 318 (484)
. ..++ +.+........+..........+.|.|+++.+|++..+.+.+.+..+++..++. ++.+++.||+++|+.+..
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~-~~~g~l~dr~g~~~~~~~ 309 (405)
T TIGR00891 231 QSAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGG-CVFGFLGDWLGRRKAYVC 309 (405)
T ss_pred hhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCchhhhHH
Confidence 0 1111 112222333333344444566788999988889999999999999999999998 777999999999998877
Q ss_pred hHHHHHHHHH-HHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHH
Q 011514 319 GLFAACINMF-ICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRS 397 (484)
Q Consensus 319 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 397 (484)
+.....+... ......+.+. ......+.+.......+...+
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~--------------------------------------~~~~~~~~~~~~~~~~~~~~~ 351 (405)
T TIGR00891 310 SLLAGQLLIIPVFAIGANVAV--------------------------------------LGLGLFFQQMLVQGIWGILPK 351 (405)
T ss_pred HHHHHHHHHHHHHHhCCchHH--------------------------------------HHHHHHHHHHHHccchhhHHH
Confidence 7665533322 2222222222 122223445555555667778
Q ss_pred HHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 011514 398 IVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKG 441 (484)
Q Consensus 398 ~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~ 441 (484)
.++|.+|+++||+++|+.+...+++..++|.+.|.+.|..++++
T Consensus 352 ~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~ 395 (405)
T TIGR00891 352 HLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYG 395 (405)
T ss_pred HHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 88999999999999999999999999999999999999874344
No 23
>PRK10091 MFS transport protein AraJ; Provisional
Probab=100.00 E-value=2e-31 Score=260.86 Aligned_cols=349 Identities=13% Similarity=0.139 Sum_probs=261.5
Q ss_pred hhHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHH
Q 011514 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (484)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~ 86 (484)
++.++.+....+....+.....|.+|.+.+|+ +.+..+.|+..+.+.++..++++++|+++||+|||+++..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--------g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~ 73 (382)
T PRK10091 2 KKVILSLALGTFGLGMAEFGIMGVLTELAHDV--------GISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLF 73 (382)
T ss_pred cchHHHHHHHHHHHHhhHHHHHhChHHHHHHc--------CCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHH
Confidence 34677888889999999999999999998776 4455667999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHh
Q 011514 87 PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF 166 (484)
Q Consensus 87 ~~~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~ 166 (484)
+.++.+++.++++++++ ++.+++.|++.|++. +...+....++.|+.|+++|+++++....+..+|..+||.+++.
T Consensus 74 ~~~~~~~~~~l~~~~~~---~~~l~~~r~l~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~ 149 (382)
T PRK10091 74 LVALCVIGNAMFTLSSS---YLMLAIGRLVSGFPH-GAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTY 149 (382)
T ss_pred HHHHHHHHHHHHHHhCc---HHHHHHHHHHHHhhh-HHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHH
Confidence 99999999999999999 899999999999755 66667788899999999999999999999999999999888765
Q ss_pred ----hhhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHHHHHHh
Q 011514 167 ----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLL 242 (484)
Q Consensus 167 ----l~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (484)
.+||++|++.+++..+..+..++.+||.+++++. +.++.++.
T Consensus 150 l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~~~~~~---------------------------------~~~~~~~~- 195 (382)
T PRK10091 150 LSQEFSWRYTFLLIAVFNIAVLASIYFWVPDIRDEAKG---------------------------------GLREQFHF- 195 (382)
T ss_pred HhhhccHHHHHHHHHHHHHHHHHHHHHhCCCCCccccc---------------------------------CHHHHHHH-
Confidence 4899999999988777766666667775321100 01112222
Q ss_pred hccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHH
Q 011514 243 RSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFA 322 (484)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~ 322 (484)
.+++..+......++..........+.+.|+++.+|+++.+.+.+.+..+++..++. ++.+++.||+++++.+..+..+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~-~~~g~l~~r~~~~~~~~~~~~~ 274 (382)
T PRK10091 196 LRSPAPWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGN-LLSGRLSGRYSPLRIAAVTDFI 274 (382)
T ss_pred hcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHh-HHHheeccccCchhHHHHHHHH
Confidence 334555544444444433444445567778887789999999999999999999998 7779999999999998888877
Q ss_pred HHHHHHHHhhc-cchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHH-HHHh
Q 011514 323 ACINMFICSIS-WSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFR-SIVS 400 (484)
Q Consensus 323 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~ 400 (484)
.+++.+.+... ++.+. ......+.+.+.....+... ....
T Consensus 275 ~~i~~~~~~~~~~~~~~--------------------------------------~~~~~~~~~~g~~~~~~~~~~~~~~ 316 (382)
T PRK10091 275 IVLALLMLFFFGGMKTA--------------------------------------SLIFAFICCAGLFALSAPLQILLLQ 316 (382)
T ss_pred HHHHHHHHHHHHhhHHH--------------------------------------HHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 77776555432 22222 02222233343333333333 3444
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 011514 401 KQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGA 442 (484)
Q Consensus 401 ~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~ 442 (484)
+..|++.++.+. .+...++|+.+||.+.|.+.|...+++.
T Consensus 317 ~~~~~~~~~~~~--~~~~~~~g~~~Gp~~~G~l~~~~~~~~~ 356 (382)
T PRK10091 317 NAKGGELLGAAG--GQIAFNLGSAIGAYCGGMMLTLGLAYNY 356 (382)
T ss_pred hCCcchHHHHHH--HHHHHHHHHHHHHHHhHHHHHcccCcch
Confidence 444555555543 4677899999999999999997546655
No 24
>PRK09952 shikimate transporter; Provisional
Probab=100.00 E-value=3e-31 Score=263.84 Aligned_cols=392 Identities=13% Similarity=0.098 Sum_probs=260.6
Q ss_pred hhHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHH
Q 011514 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (484)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~ 86 (484)
+|.....+++.+++.++......+.|.+..+.+.++.++. ..........++..+++.+++++.|+++||+|||+++..
T Consensus 21 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l~~ 99 (438)
T PRK09952 21 RRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRMLML 99 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHHHH
Confidence 4455666778888999888887777765554322222221 211111223345667788999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccchhh-----HHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHH
Q 011514 87 PLTLSIIPLAILAYRRSISF-----FYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGT 161 (484)
Q Consensus 87 ~~~~~~i~~~~~~~~~~~~~-----~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~ 161 (484)
+.++.+++.+++++++++.. .+.+++.|+++|++. |...|....++.|+.|+++|++..+..+.+..+|.++++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~-g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~ 178 (438)
T PRK09952 100 TVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAV-GGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLST 178 (438)
T ss_pred HHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhh-cccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999421 125888999999866 666678899999999999999999999999999988886
Q ss_pred HhhH------------hhhhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCccc
Q 011514 162 LAAR------------FLSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVC 229 (484)
Q Consensus 162 ~l~~------------~l~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (484)
.+.. ..+||.+|++.++..++ .+......||++++.+++++ .++ .+
T Consensus 179 ~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~-~~~l~~~~~es~~~~~~~~~--------------~~~-------~~ 236 (438)
T PRK09952 179 GLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLI-ALWVRNGMEESAEFEQQQHE--------------QAA-------AK 236 (438)
T ss_pred HHHHHHHHhCCHHHhhccChHHHHHHHHHHHHH-HHHHHHhCCCChhHHHHHhh--------------ccc-------cc
Confidence 5543 25899999988765443 33344456676543221100 000 00
Q ss_pred CCCCchHHHHHHhhccchhHHHH-HHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhh
Q 011514 230 KKIPSIRDLICLLRSSVTLSQAA-VVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAP 308 (484)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 308 (484)
++ .+. .+.++++|+.+... ...++..+..+...++.|.|.++.+|++...........+....++. ++.++++|
T Consensus 237 ~~-~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~-~~~g~l~D 311 (438)
T PRK09952 237 KR-IPV---IEALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTI-PCFAWLAD 311 (438)
T ss_pred cc-CCH---HHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 00 111 11233445444443 34444555666677889999988889988765555556666666776 66799999
Q ss_pred hhcchHHHHHhHHHHHHHHHHHhh---ccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHH
Q 011514 309 ILGEAKLLSLGLFAACINMFICSI---SWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFS 385 (484)
Q Consensus 309 ~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 385 (484)
|++||+.+..+..+..++...+.. ..+... .+.....+.+
T Consensus 312 r~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------------~~~~~~~l~~ 354 (438)
T PRK09952 312 RFGRRRVYITGALIGTLSAFPFFMALEAQSIFW-------------------------------------IVFFSIMLAN 354 (438)
T ss_pred HhCchHHHHHHHHHHHHHHHHHHHHHHcCChHH-------------------------------------HHHHHHHHHH
Confidence 999999887776655444332221 111111 0122233445
Q ss_pred HhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHH-HHHHHHHHHHHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHHH
Q 011514 386 VLVVFATPSFRSIVSKQVGPNEQGKAQGCISGIS-SFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQ 464 (484)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~-~lg~~~gp~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (484)
++.+...+..+++..|.+|++.|+++.|+.+... .+++.++|.+.+.+.+...+ ++.. .+...+++.+++.+.
T Consensus 355 ~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~-~~~~-----~~~~~~~~~~i~~v~ 428 (438)
T PRK09952 355 IAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGG-SWHS-----VAIYLLAGCLISAMT 428 (438)
T ss_pred HHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCC-CchH-----HHHHHHHHHHHHHHH
Confidence 6666677778899999999999999999876665 48999999999999986422 2211 344555555555555
Q ss_pred HHHhcc
Q 011514 465 SLMMSH 470 (484)
Q Consensus 465 ~~~~~~ 470 (484)
.+..++
T Consensus 429 ~~~~~~ 434 (438)
T PRK09952 429 ALLMKD 434 (438)
T ss_pred HHHccc
Confidence 555543
No 25
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=100.00 E-value=1.3e-31 Score=262.01 Aligned_cols=364 Identities=14% Similarity=0.114 Sum_probs=267.3
Q ss_pred HHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhH-HHHHHHH
Q 011514 14 FVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLT-LPLTLSI 92 (484)
Q Consensus 14 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~-~~~~~~~ 92 (484)
.+..++..++.++..|.+|.+.++.+ +.+..+.|++.+.+.+...+.+++.|.++||+||||.++ .+.+...
T Consensus 3 ~~~~~~~~~~~~~~~~~l~~~l~~~~-------g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~ 75 (375)
T TIGR00899 3 LLVAFLTGIAGALQFPTLSLFLSEEV-------RARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAA 75 (375)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHHccc-------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHH
Confidence 34578888999999999999875432 555677899999999999999999999999999988765 4566667
Q ss_pred HHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHH--HHHHHHHHHhHHhHHHHhhHh----
Q 011514 93 IPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASA--FGILLGVLSASFVCGTLAARF---- 166 (484)
Q Consensus 93 i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~--~~~~~~~~~~g~~ig~~l~~~---- 166 (484)
++.++++++++ ++.+++.|++.|.+. +...|...++..|+.|+++|++. .+......++|..+||.+++.
T Consensus 76 ~~~~~~~~~~~---~~~l~~~~~~~g~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~ 151 (375)
T TIGR00899 76 LACLLFAWNRN---YFLLLVLGVLLSSFA-STANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALG 151 (375)
T ss_pred HHHHHHHhcch---HHHHHHHHHHHHhhh-hhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHh
Confidence 77888889988 788888999988654 56678888899999887777754 578888888999999988775
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHHHHHHhhccc
Q 011514 167 LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSV 246 (484)
Q Consensus 167 l~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (484)
.+||++|++.+.+.++..+..++.+||+|+++++++ +..+.++ ..++|
T Consensus 152 ~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~----~~~~~ 199 (375)
T TIGR00899 152 FGFTVMFLTAALAFVLCGVLVWLFLPSYPRGAPGAL----------------------------TRLEVRG----LLASR 199 (375)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHhCCCcccCccccc----------------------------Ccchhhh----hhcCc
Confidence 489999999988777777777777888654322110 0001111 33445
Q ss_pred hhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHH
Q 011514 247 TLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACIN 326 (484)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~ 326 (484)
.++......++............|.|+++.+|.++.+.+...........++. +..+++.||+++|+.+..+.....+.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~-~~~g~l~~r~g~~~~~~~~~~~~~~~ 278 (375)
T TIGR00899 200 DTRLLFVACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFM-LLAGYLIKRFGKRRLMLLAALAGVAF 278 (375)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH-HhHHHHHHHhcchhHHHHHHHHHHHH
Confidence 55555554554444445556678889888889999998888777766666666 67799999999999887776665555
Q ss_pred HHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCC
Q 011514 327 MFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPN 406 (484)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~ 406 (484)
.......++.+. ......+.+++.+...+....+.+|..|+
T Consensus 279 ~~~~~~~~~~~~--------------------------------------~~~~~~~~g~~~g~~~~~~~~~~~~~~~~- 319 (375)
T TIGR00899 279 YTGLAADNSLWA--------------------------------------LLMLQLLNAIFIGILAGIGMLYFQDLMPG- 319 (375)
T ss_pred HHHHHHHHHHHH--------------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHhCcc-
Confidence 444433333333 13333456666777777778888888874
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHHHHHHh
Q 011514 407 EQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMM 468 (484)
Q Consensus 407 ~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (484)
+++++.|+.+...++|..++|.+.|.+.+.. +++. .+.+.+++.+++.+...+.
T Consensus 320 ~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~-g~~~-------~~~~~~~~~~~~~~~~~~~ 373 (375)
T TIGR00899 320 RAGAATTLYTNTGRVGWIIAGSVGGILAERW-SYHA-------VYWFAIVMLIVALFCLLLI 373 (375)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cchh-------HHHHHHHHHHHHHHHHhee
Confidence 6679999999999999999999999999876 5544 4566666666655555443
No 26
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=3.7e-31 Score=263.15 Aligned_cols=379 Identities=12% Similarity=0.039 Sum_probs=252.6
Q ss_pred HHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHH
Q 011514 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLT 89 (484)
Q Consensus 10 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~ 89 (484)
+....++.+++.++...+....|.+.+++...+.+ ..+..+.+...+...++..++++++|+++||+|||+++..+.+
T Consensus 24 ~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~ 101 (432)
T PRK10406 24 IVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNT--TTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVC 101 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 33445668888899888777777777665311112 2222344555666777777999999999999999999999999
Q ss_pred HHHHHHHHHHhccchh-----hHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhh
Q 011514 90 LSIIPLAILAYRRSIS-----FFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAA 164 (484)
Q Consensus 90 ~~~i~~~~~~~~~~~~-----~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~ 164 (484)
+.+++.+++++++++. ....+++.|+++|++. |...|...++++|+.|+++|+++.+..+.....|..+++.+.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~-g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~ 180 (432)
T PRK10406 102 MMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSV-GGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVV 180 (432)
T ss_pred HHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhh-hhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998842 1246889999999765 667789999999999999999999998888888877777543
Q ss_pred H------------hhhhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCC
Q 011514 165 R------------FLSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKI 232 (484)
Q Consensus 165 ~------------~l~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (484)
. ..|||.+|++.++..++. +.....+||++++++++ .++.
T Consensus 181 ~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~-~~~~~~~~e~~~~~~~~---------------------------~~~~ 232 (432)
T PRK10406 181 VVLQQTLEDAELREWGWRIPFALGAVLAVVA-LWLRRQLDETSQQETRA---------------------------LKEA 232 (432)
T ss_pred HHHHHhCCHHHHhccchHHHHHHHHHHHHHH-HHHHhcCCCCchHHHhh---------------------------hccc
Confidence 2 358999999887666544 33344466654321110 0011
Q ss_pred CchHHHHHHhhccchhHHHHHHHHH-HhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 011514 233 PSIRDLICLLRSSVTLSQAAVVAFF-SGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILG 311 (484)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g 311 (484)
.+.++ +.++|+.+...+..++ .....+...+++|.|+++.+|++..+.+...+...+...+++ .+.++++||++
T Consensus 233 ~~~~~----l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~-~~~G~l~Dr~g 307 (432)
T PRK10406 233 GSLKG----LWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQ-PLIGALSDKIG 307 (432)
T ss_pred ccHHH----HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcC
Confidence 13344 4445665555444333 355566778899999988889999888888888888888888 55699999999
Q ss_pred chHHHHHhHHHHHHHHHHHh--hc--cchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHh
Q 011514 312 EAKLLSLGLFAACINMFICS--IS--WSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVL 387 (484)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 387 (484)
||+.+..+..+..+...... .. .+... ......+....
T Consensus 308 rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------~~~~~~~~~~~ 349 (432)
T PRK10406 308 RRTSMLCFGSLAALFTVPILSALQNVSSPYA--------------------------------------AFGLVMCALLI 349 (432)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHcCCcHHH--------------------------------------HHHHHHHHHHH
Confidence 99877665554333222111 11 11111 01111112222
Q ss_pred hhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHHHHH
Q 011514 388 VVFATPSFRSIVSKQVGPNEQGKAQGCISGISSF-ANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSL 466 (484)
Q Consensus 388 ~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~l-g~~~gp~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (484)
.+...+....+.+|.+|++.|+++.|+.+...+. .+...|.+.+.+ +..+.+.. .++..++..+++.+..+
T Consensus 350 ~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l-~~~g~~~~-------~~~~~~~~~~i~~~~~~ 421 (432)
T PRK10406 350 VSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSL-KSIGMETA-------FFWYVTLMAVVAFLVSL 421 (432)
T ss_pred HHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHH-HHhCCCcH-------HHHHHHHHHHHHHHHHH
Confidence 2333445667889999999999999999987765 344577777744 54422222 23444445555555545
Q ss_pred Hhcc
Q 011514 467 MMSH 470 (484)
Q Consensus 467 ~~~~ 470 (484)
.+++
T Consensus 422 ~l~~ 425 (432)
T PRK10406 422 MLHR 425 (432)
T ss_pred Hhhh
Confidence 4433
No 27
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=100.00 E-value=2.1e-31 Score=263.23 Aligned_cols=345 Identities=12% Similarity=0.087 Sum_probs=266.7
Q ss_pred HHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHHHHH
Q 011514 14 FVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSII 93 (484)
Q Consensus 14 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~i 93 (484)
.+..++..++.++..|.+|.+.+++ +.+..+.++..+.+.++..+++++.|+++||+|||+++..+....++
T Consensus 19 ~l~~~~~~~~~~~~~~~~~~~~~~~--------~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~ 90 (406)
T PRK15402 19 VLFEFATYIANDMIQPGMLAVVEDF--------NAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFIL 90 (406)
T ss_pred HHHHHHHHhhhhhHhcchHHHHHHh--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHH
Confidence 4444555567788899999988776 44556778999999999999999999999999999999999999999
Q ss_pred HHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHh----hhh
Q 011514 94 PLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF----LST 169 (484)
Q Consensus 94 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~----l~~ 169 (484)
+.+++.++++ ++.+++.|+++|++. +...+...+++.|.+|+++|.+..++......+|..+||.+++. .+|
T Consensus 91 ~~~~~~~~~~---~~~l~~~~~l~G~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w 166 (406)
T PRK15402 91 TCLAILLAQS---IEQFTLLRFLQGIGL-CFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPW 166 (406)
T ss_pred HHHHHHHHcc---HHHHHHHHHHHHhHh-hhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCc
Confidence 9999999998 888899999999755 66667889999999999999999999988888888999988765 489
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHHHHHHhhccchhH
Q 011514 170 TSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLS 249 (484)
Q Consensus 170 ~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (484)
|+.|++.+++.++..+..++..||++++++++ .+.++..+..+...++|.++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~~~~~~~ 218 (406)
T PRK15402 167 RGMFVLFAALAALSFFGLWRAMPETAGRVGEK----------------------------LSLKELGRDYKLVLKNRRFV 218 (406)
T ss_pred cHHHHHHHHHHHHHHHHHHHhCCCCCcccccc----------------------------ccHHHHHHHHHHHHcCcHHH
Confidence 99999988887777666666677654321110 00012233345567788888
Q ss_pred HHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHH
Q 011514 250 QAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFI 329 (484)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~ 329 (484)
...+..++............|.|+++.+|+++.+.+........+..++. ++.+++.||+++|+.+..+..+..++...
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~-~~~g~l~~r~~~~~~~~~~~~~~~~g~~~ 297 (406)
T PRK15402 219 AGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGN-LTLARLTSRRPLRSLIRMGLWPMVAGLLL 297 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 77776666665555666778888888889999998888777777777777 67799999999999988888777776666
Q ss_pred Hhhcc----chhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCC
Q 011514 330 CSISW----SAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGP 405 (484)
Q Consensus 330 ~~~~~----~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~ 405 (484)
+.... ..+. | ......+.+++.+...+........ .++
T Consensus 298 ~~~~~~~~~~~~~------------------------~-------------~~~~~~~~g~g~~~~~~~~~~~~~~-~~~ 339 (406)
T PRK15402 298 AALATVISSHAYL------------------------W-------------LTAGLSLYAFGIGLANAGLYRLTLF-SSD 339 (406)
T ss_pred HHHHHHcccccHH------------------------H-------------HHHHHHHHHHHHHHHhhhHHHHHhh-hcc
Confidence 55432 1111 0 1334456777777766666665543 345
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 011514 406 NEQGKAQGCISGISSFANIVSPLIFSPLTALF 437 (484)
Q Consensus 406 ~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~ 437 (484)
+++|++.+..+..+.++..+|+.+.+.+++..
T Consensus 340 ~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~ 371 (406)
T PRK15402 340 VSKGTVSAAMGMLSMLIFTVGIELSKHAYLGG 371 (406)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHhcccCC
Confidence 89999999999999999999999999998864
No 28
>PRK10054 putative transporter; Provisional
Probab=100.00 E-value=8e-32 Score=264.29 Aligned_cols=358 Identities=15% Similarity=0.175 Sum_probs=276.5
Q ss_pred CCCcchhhHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCc
Q 011514 1 MGMEKEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGR 80 (484)
Q Consensus 1 m~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Gr 80 (484)
|+.+. +|.++.+....++...+.+...|.+|.+.++.+ +.+..+.|++.+.+.++..+.+++.|+++||+||
T Consensus 1 ~~~~~-~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~-------g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~ 72 (395)
T PRK10054 1 MNLSL-RRSTSALLASSLLLTIGRGATLPFMTIYLSRQY-------SLSVDLIGYAMTIALTIGVVFSLGFGILADKFDK 72 (395)
T ss_pred CCCCC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCc
Confidence 54444 567788888999999999999999999886543 5566778999999999999999999999999999
Q ss_pred hhHhHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHH
Q 011514 81 KAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCG 160 (484)
Q Consensus 81 k~~l~~~~~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig 160 (484)
|+++..+.+...++.++.+++++ ++.+++.|.+.|.+. +...+...++..|..|+++|++++++.....++|..+|
T Consensus 73 k~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~ig 148 (395)
T PRK10054 73 KRYMLLAITAFASGFIAIPLVNN---VTLVVLFFALINCAY-SVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVG 148 (395)
T ss_pred chhHHHHHHHHHHHHHHHHHHhH---HHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988 777788888888543 56667889999999999999999999999999999999
Q ss_pred HHhhHhh---hhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHH
Q 011514 161 TLAARFL---STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRD 237 (484)
Q Consensus 161 ~~l~~~l---~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (484)
|.+++.+ +|+.+|++.+++.++..+...+.+||++++++++ + ++ . ++
T Consensus 149 p~l~~~l~~~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~~-------------------------~--~~--~-~~ 198 (395)
T PRK10054 149 PPLGTLLVMQSINLPFWLAAICSAFPLVFIQIWVQRSEKAIATE-------------------------T--GS--V-WS 198 (395)
T ss_pred HHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhccccccccc-------------------------h--hh--h-hh
Confidence 9998874 7999999888777776666666566654322111 0 00 0 11
Q ss_pred HHHHhhccchhHHHHHHHHHHhchhhhhHHHHHHHHhhh--cCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHH
Q 011514 238 LICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQ--FHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKL 315 (484)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~ 315 (484)
.+...++|.++...+..++..+.......+.+.|..+. .+.+....+.............+ ...+++.||.++|+.
T Consensus 199 -~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~ 276 (395)
T PRK10054 199 -PSVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQ-YSVGRRLNAANIRPL 276 (395)
T ss_pred -hhhhccCceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeeh-hHHHHHHccCCchhH
Confidence 12255678887777777776666655556666666433 35556666777777777666666 556899999999999
Q ss_pred HHHhHHHHHHHHHHHhhcc-chhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhH
Q 011514 316 LSLGLFAACINMFICSISW-SAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPS 394 (484)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 394 (484)
+..+..+..++...+.+.. +.+. ......+.+++.....|.
T Consensus 277 l~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------~~~~~~~~~~g~~~~~p~ 318 (395)
T PRK10054 277 MTAGTLCFVIGLVGFIFSGNSLLL--------------------------------------WGMSAAVFTVGEIIYAPG 318 (395)
T ss_pred HHHHHHHHHHHHHHHHHcchHHHH--------------------------------------HHHHHHHHHHHHHHHHhh
Confidence 8888877777776665542 2332 133455777888877888
Q ss_pred HHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 011514 395 FRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGA 442 (484)
Q Consensus 395 ~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~ 442 (484)
..+.+.+..|++.++++++..+ ...+|..+||.++|.++|+. ++..
T Consensus 319 ~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~-g~~~ 364 (395)
T PRK10054 319 EYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTL-PPWS 364 (395)
T ss_pred HHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHc-Chhh
Confidence 8899999999999999998765 67789999999999999987 5543
No 29
>PRK12307 putative sialic acid transporter; Provisional
Probab=100.00 E-value=7e-32 Score=268.49 Aligned_cols=359 Identities=13% Similarity=0.107 Sum_probs=256.7
Q ss_pred hhHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHH
Q 011514 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (484)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~ 86 (484)
++.+...++..+.+.++.....+.+|.+.+++ +.+..+.+++.+++.++..+++++.|+++||+|||+++..
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--------~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~ 88 (426)
T PRK12307 17 KNALFSAWLGYVFDGFDFMLIFYIMYLIKADL--------GLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMW 88 (426)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHh--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHH
Confidence 44566677778888888888889999888776 4445567999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHh
Q 011514 87 PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF 166 (484)
Q Consensus 87 ~~~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~ 166 (484)
+.++.+++.++++++++ ++.+++.|+++|++. +...+....++.|++|+|+|+++.++...+.++|.++++.+.+.
T Consensus 89 ~~~~~~~~~~~~~~~~~---~~~l~~~r~l~G~g~-g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~ 164 (426)
T PRK12307 89 SIVAYSVGTGLSGLASG---VIMLTLSRFIVGMGM-AGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPS 164 (426)
T ss_pred HHHHHHHHHHHHHHHhH---HHHHHHHHHHHHHHH-hhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHH
Confidence 99999999999999999 899999999999765 66667899999999999999999999999999999999877754
Q ss_pred ----hhhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHHHHHHh
Q 011514 167 ----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLL 242 (484)
Q Consensus 167 ----l~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (484)
.+||++|++... ..+..+......||++++++++.+ +++++. + ...+..+...+..
T Consensus 165 l~~~~~w~~~f~i~~~-~~~~~~~~~~~~p~~~~~~~~~~~-------------~~~~~~---~---~~~~~~~~~~~~~ 224 (426)
T PRK12307 165 FAEAYGWRAAFFVGLL-PVLLVIYIRARAPESKEWEEAKLS-------------GKGKHS---Q---SAWSVFSLSMKGL 224 (426)
T ss_pred HcccCCHHHHHHHHHH-HHHHHHHHHHHCCCChHHHHhhhh-------------cccccc---c---cchhhhhHHHHHH
Confidence 589999987553 323222222223443321111100 000000 0 0000111123335
Q ss_pred hccchhHHHHHHHH---HHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHh
Q 011514 243 RSSVTLSQAAVVAF---FSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLG 319 (484)
Q Consensus 243 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~ 319 (484)
.+++.++....... ...........++|.|+++. |+++.+.+...+...++..++. ++.+++.||++||+....+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~g~-~~~g~l~dr~~~~~~~~~~ 302 (426)
T PRK12307 225 FNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAGE-GFDTGVVSNLMTAAAFGTVLGN-IVWGLCADRIGLKKTFSIG 302 (426)
T ss_pred HhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhccHHHHHHH
Confidence 55566554333222 22222233566889988875 9999999998898899898888 7779999999999988888
Q ss_pred HHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHH--hhhhhhhHHHH
Q 011514 320 LFAACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSV--LVVFATPSFRS 397 (484)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~~~~~~~ 397 (484)
..+..+..+.......... ......+.+. ......+....
T Consensus 303 ~~~~~~~~~~~~~~~~~~~--------------------------------------~~~~~~~~~~~~~~~~~~~~~~~ 344 (426)
T PRK12307 303 LLMSFLFIFPLFRIPQDNY--------------------------------------LLLGACLFGLMATNVGVGGLVPK 344 (426)
T ss_pred HHHHHHHHHHHHHHccccH--------------------------------------HHHHHHHHHHHHhcccHhHHHHH
Confidence 7776655544433222111 0111112222 22223345567
Q ss_pred HHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 011514 398 IVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 437 (484)
Q Consensus 398 ~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~ 437 (484)
.+.|.+|+++||++.|+.+...++++.++|.+.|.+.+..
T Consensus 345 ~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~ 384 (426)
T PRK12307 345 FLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITM 384 (426)
T ss_pred HHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcc
Confidence 7889999999999999999999999999999999999876
No 30
>PRK03699 putative transporter; Provisional
Probab=100.00 E-value=3.7e-31 Score=260.08 Aligned_cols=352 Identities=13% Similarity=0.111 Sum_probs=268.5
Q ss_pred chhhHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHh
Q 011514 5 KEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAML 84 (484)
Q Consensus 5 ~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l 84 (484)
+++|..+..++..++.........+.+|.+.+++ +.+..+.|++.+.+.++..+++++.|+++||+|||+.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~--------~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~ 75 (394)
T PRK03699 4 NRIKLTWISFLSYALTGALVIVTGMVMGPIAEYF--------NLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQL 75 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHh--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 3455666777778888787788888899988776 55666789999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhh
Q 011514 85 TLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAA 164 (484)
Q Consensus 85 ~~~~~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~ 164 (484)
..+.++.+++.++++++++ ++.+++.|+++|++. +...+...+++.|++|+++|+++++..+...++|..++|.+.
T Consensus 76 ~~~~~~~~i~~~l~~~~~~---~~~~~~~~~l~G~~~-g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 151 (394)
T PRK03699 76 IFGFALMILAVAGLMFSHS---LALFSIAMFVLGVVS-GITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIA 151 (394)
T ss_pred HHHHHHHHHHHHHHHHcch---HHHHHHHHHHHHHhh-HhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999988 888899999999755 666678899999999999999999999888888888888776
Q ss_pred Hh-----hhhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHHHH
Q 011514 165 RF-----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLI 239 (484)
Q Consensus 165 ~~-----l~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (484)
+. .+||++|.+.+++.++..++.++ ++.|+.+++++ +++. + ..++
T Consensus 152 ~~l~~~~~gw~~~f~~~~~~~~~~~~~~~~--~~~p~~~~~~~----------------~~~~----~------~~~~-- 201 (394)
T PRK03699 152 AYLLARSIEWYWVYACIGLVYVAIFILTLF--SEFPALGKHAP----------------KADK----P------VAKE-- 201 (394)
T ss_pred HHHHhccccHHHHHHHHHHHHHHHHHHHHh--cCCccccccCc----------------cccC----c------cccc--
Confidence 53 48999999888766655444332 22222111100 0000 0 0000
Q ss_pred HHhhccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHh
Q 011514 240 CLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLG 319 (484)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~ 319 (484)
..++.++...+..++..........+.|.|+++.+|+|+.+.+.+.+...++..++. ++.+++.||+++|+.+...
T Consensus 202 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~-~~~g~l~dr~~~~~~l~~~ 277 (394)
T PRK03699 202 ---KWGIGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGM-WIFSFIVRFFDLQRILTVL 277 (394)
T ss_pred ---cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHH-HHHHHHHHHhchhhHHHHH
Confidence 012445555566666666677788899999998889999999999999999888988 7779999999999988777
Q ss_pred HHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHH
Q 011514 320 LFAACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIV 399 (484)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 399 (484)
..+..+...++...++.+. ........|++.+...+...+..
T Consensus 278 ~~~~~~~~~~~~~~~~~~~--------------------------------------~~~~~~~~G~~~~~~~~~~~~~~ 319 (394)
T PRK03699 278 AGLALVLMYLFVNTDDPSH--------------------------------------LLYAILGLGFFSSAIYTTIITLG 319 (394)
T ss_pred HHHHHHHHHHHHHcCCchH--------------------------------------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 7666666555554444333 13344466776777777777777
Q ss_pred hcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 011514 400 SKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGA 442 (484)
Q Consensus 400 ~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~ 442 (484)
.+..| +++++..|......++|..++|.+.|.+.|.. +...
T Consensus 320 ~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~-g~~~ 360 (394)
T PRK03699 320 SQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAHF-GLQA 360 (394)
T ss_pred HHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHh-Cchh
Confidence 77776 45678889999999999999999999999986 5554
No 31
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=100.00 E-value=5.7e-31 Score=263.24 Aligned_cols=361 Identities=13% Similarity=0.062 Sum_probs=247.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHHHHHHHHHHHhccch-hhHHHHHHHHHHhhhhccchh
Q 011514 47 SLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSI-SFFYAYYALRTLTAMVCEGSI 125 (484)
Q Consensus 47 ~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~i~~~~~~~~~~~-~~~~~l~~~r~l~G~~~~g~~ 125 (484)
+.+..+.|+..+.+.++..+++++.|+++||+|||++++.+.++.+++.+++++.+.. ..++.+++.|++.|++. +..
T Consensus 59 g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~-g~~ 137 (452)
T PRK11273 59 GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQ-GMG 137 (452)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHHHHH-hcc
Confidence 5566778999999999999999999999999999999999999999999988876411 11677889999999765 556
Q ss_pred hHhhhHHHhhcCCccchhHHHHHHHHHHHhHH-hHHHHhhHh----hhhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCC
Q 011514 126 NCLALAYVADNISERQRASAFGILLGVLSASF-VCGTLAARF----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDD 200 (484)
Q Consensus 126 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~-~ig~~l~~~----l~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~ 200 (484)
.|.....+.|++|+++|++++++.+.+.++|. +.+|+++.. .+||+.|++.+++.++..++..+++||++++...
T Consensus 138 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~ 217 (452)
T PRK11273 138 WPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFAMMRDTPQSCGL 217 (452)
T ss_pred chHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCC
Confidence 67777889999999999999999999999886 456654322 3899999998888777777777778887654321
Q ss_pred CCCCCCcccccccccCCCCCCCCccCcccCCCCchHHHH-HHhhccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCc
Q 011514 201 DDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLI-CLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHF 279 (484)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 279 (484)
+++.+. + .+..++.++ + +++..+.++.+ +...+++.++...+..++..........++|.|+++..|+
T Consensus 218 ~~~~~~----~---~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~ 286 (452)
T PRK11273 218 PPIEEY----K---NDYPDDYNE---K-HEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHF 286 (452)
T ss_pred CChhhh----h---hcccccccc---c-cCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 111000 0 000000000 0 00111233322 3356788888888887777777777888999999998899
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHhhhhh--cchHHH-HHhHHHHHHHHHHHhhcc--chhhHHHhhhhHHHHHHHHh
Q 011514 280 NKNQFADLMLIAGLAGTISQLLFMPLLAPIL--GEAKLL-SLGLFAACINMFICSISW--SAWVIKIFFNKVFKLLLLSF 354 (484)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--g~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~f 354 (484)
+..+.+.......++..++. ++.++++||+ +||+.. .....+..++...+.... +.+.
T Consensus 287 s~~~~~~~~~~~~~~~~~g~-~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~---------------- 349 (452)
T PRK11273 287 ALDKSSWAYFLYEYAGIPGT-LLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTV---------------- 349 (452)
T ss_pred CHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChHH----------------
Confidence 99998888888888888888 7779999998 444332 222222233332222211 1111
Q ss_pred hhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHHHHHH-HHHHHHHH
Q 011514 355 ITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIV-SPLIFSPL 433 (484)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~-gp~i~g~l 433 (484)
........+.......+....+..|.+|++.||++.|+.+...++|+.+ +|.+.|.+
T Consensus 350 ----------------------~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l 407 (452)
T PRK11273 350 ----------------------DMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYT 407 (452)
T ss_pred ----------------------HHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHH
Confidence 0112223333322223334456679999999999999999999998765 79999999
Q ss_pred HHhhhcCCCCcccCchHHHHHHHHHHHHHHHHH
Q 011514 434 TALFLSKGAPFNFPGFSIMCIGLASMVAFIQSL 466 (484)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (484)
.|+. +++. .|.+.+++.+++++...
T Consensus 408 ~~~~-g~~~-------~f~~~~~~~~~~~~~~~ 432 (452)
T PRK11273 408 VDFF-GWDG-------GFMVMIGGSILAVILLI 432 (452)
T ss_pred HHHh-cchH-------HHHHHHHHHHHHHHHHH
Confidence 9987 5554 44555555555555444
No 32
>PRK10504 putative transporter; Provisional
Probab=100.00 E-value=8.7e-31 Score=263.93 Aligned_cols=379 Identities=13% Similarity=0.086 Sum_probs=283.9
Q ss_pred hhHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHH
Q 011514 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (484)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~ 86 (484)
++.++.++.+.++..++.....+.+|.+.+++ +.+..+.|++.+.+.++..++.+++|+++||+|||++++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~--------g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~ 80 (471)
T PRK10504 9 RWQLWIVAFGFFMQSLDTTIVNTALPSMAQSL--------GESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFT 80 (471)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHh--------CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHH
Confidence 45677788888999999999999999999876 4555667899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHh
Q 011514 87 PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF 166 (484)
Q Consensus 87 ~~~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~ 166 (484)
+.++.+++.+++.++++ ++.+++.|+++|++. +...|...+++.|.+|+++|+++.+......++|..+||.+++.
T Consensus 81 ~~~~~~~~~~~~~~~~~---~~~l~~~~~l~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~ 156 (471)
T PRK10504 81 AIVLFTLGSLFCALSGT---LNELLLARVLQGVGG-AMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGL 156 (471)
T ss_pred HHHHHHHHHHHHHHhCC---HHHHHHHHHHHHhhh-HHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 99999999999999888 888899999999765 66778899999999999999999999999999999999988876
Q ss_pred ----hhhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccc---------cccccCCCCCCCCc---------
Q 011514 167 ----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITE---------ETEGVNQNESNSPV--------- 224 (484)
Q Consensus 167 ----l~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~--------- 224 (484)
.+||+.|++......+..+......|+++....+ .|....... ..++.+........
T Consensus 157 l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (471)
T PRK10504 157 LVEYASWHWIFLINIPVGIIGAIATLMLMPNYTMQTRR-FDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGV 235 (471)
T ss_pred HHhhccHHHHHHHHHHHHHHHHHHHHHhCCCccccCCC-CChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHH
Confidence 4899999998877777666666656654322211 111000000 00000000000000
Q ss_pred ------cCcccCCCCchHHHHHHhhccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHH
Q 011514 225 ------KIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTIS 298 (484)
Q Consensus 225 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 298 (484)
..++.+..++..+ .+ +++||.++......++..........+.|+|+++.+|.++.+.++......++..++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~-~~-l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~ 313 (471)
T PRK10504 236 VALLLYLLHARNNNRALFS-LK-LFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGM 313 (471)
T ss_pred HHHHHHHHHHhcCCCCccC-HH-HhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 0000000011111 11 567788888888888877777777778999999878999999998888877777777
Q ss_pred HHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhhccc-hhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccch
Q 011514 299 QLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWS-AWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQV 377 (484)
Q Consensus 299 ~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 377 (484)
. .+.+++.||+|+|+.+..+..+.++...++.+... .+. +. .
T Consensus 314 ~-~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~------------~ 356 (471)
T PRK10504 314 K-RIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALLGWY------------------------YL------------L 356 (471)
T ss_pred H-HHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccccccH------------------------HH------------H
Confidence 6 66699999999999998888877776665554321 111 00 0
Q ss_pred hhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 011514 378 PYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 437 (484)
Q Consensus 378 ~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~ 437 (484)
.....+.|++.+...+..+....+.+|++.+|+++|+.++.+.+|..+|+.+.|.+.+..
T Consensus 357 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~ 416 (471)
T PRK10504 357 PFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLF 416 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 223345567777778888889999999999999999999999999999999999999886
No 33
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=100.00 E-value=6.6e-31 Score=261.94 Aligned_cols=378 Identities=16% Similarity=0.195 Sum_probs=305.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhH
Q 011514 6 EIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLT 85 (484)
Q Consensus 6 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~ 85 (484)
++|.+..++.+.++..++..+....++.++.+. +-|+...|++.++..++.++.+++.|.++||++|||+++
T Consensus 8 r~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~l--------t~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili 79 (524)
T PF05977_consen 8 RNRNFRRLWIAQLISNLGDWMQTVALAWLVTQL--------TGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILI 79 (524)
T ss_pred cCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------hCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHH
Confidence 457888999999999999999999999998876 445567899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhc--cchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHh
Q 011514 86 LPLTLSIIPLAILAYR--RSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLA 163 (484)
Q Consensus 86 ~~~~~~~i~~~~~~~~--~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l 163 (484)
.+.++.++..+..++. .+....+.+++.-++.|++. +...|+.++++.|..|+|+..+++++.+...+++.++||.+
T Consensus 80 ~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~-a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPal 158 (524)
T PF05977_consen 80 LSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGS-AFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPAL 158 (524)
T ss_pred HHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchH
Confidence 9998877665544432 12122688899999999754 88889999999999999999999999999999999999999
Q ss_pred hHhh----hhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHHHH
Q 011514 164 ARFL----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLI 239 (484)
Q Consensus 164 ~~~l----~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (484)
+|.+ |-.+.|.+.++..++..... ...+.++++++. +.++..+++++.+
T Consensus 159 gG~Lva~~G~~~~f~inalsfl~~i~~l-~~~~~~~~~~~~--------------------------~~e~~~~~l~~G~ 211 (524)
T PF05977_consen 159 GGILVAFFGAAAAFLINALSFLISILAL-LRWKPPPPPSSL--------------------------PRERFFSALREGL 211 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcccccccccc--------------------------chhhhhhhHHHHH
Confidence 9873 66888888886555443333 333332211111 1122345678888
Q ss_pred HHhhccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHh
Q 011514 240 CLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLG 319 (484)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~ 319 (484)
+..+++|.+...++..++..+........+|.+.++.+|.++...|++++..+++++++. ++.+++.+|+++++++..+
T Consensus 212 ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Ga-l~~~~l~~~~~~~~lv~~~ 290 (524)
T PF05977_consen 212 RYVRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGA-LLLPRLRRRLSSRRLVLLA 290 (524)
T ss_pred HHHhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHH-HHHHHhhcccCcchhhHHH
Confidence 889989988888877777777777778889999999999999999999999999999999 6679999999999998889
Q ss_pred HHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHH
Q 011514 320 LFAACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIV 399 (484)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 399 (484)
.+..+++++.+++.++.+. .....++.|++........++.+
T Consensus 291 ~~~~a~~~~~lal~~~~~~--------------------------------------~~~~l~l~G~~~~~~~~~~~t~~ 332 (524)
T PF05977_consen 291 SLLFALALLLLALSPSFWL--------------------------------------ALIALFLAGAAWIIANSSLNTLV 332 (524)
T ss_pred HHHHHHHHHHHhcchHHHH--------------------------------------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888888888887776 24455577888888888899999
Q ss_pred hcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHHHHH
Q 011514 400 SKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSL 466 (484)
Q Consensus 400 ~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (484)
++.+|++.||++++++++....+..+|..+.|.+.+.. +... .+.+++++.+++.....
T Consensus 333 Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~-g~~~-------al~~a~~~lll~~~~~~ 391 (524)
T PF05977_consen 333 QLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHF-GVRT-------ALLIAGAALLLSALIAL 391 (524)
T ss_pred HHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHH-------HHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999986 5443 34555555555444443
No 34
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=100.00 E-value=2.3e-31 Score=260.11 Aligned_cols=351 Identities=15% Similarity=0.098 Sum_probs=263.8
Q ss_pred HHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHHHHHHHHHHHhccc
Q 011514 24 TMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRS 103 (484)
Q Consensus 24 ~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~i~~~~~~~~~~ 103 (484)
.....+..|.+.+++ +.+..+.|++.+++.++..+++++.|.++||+|||+++..+.++.+++.++++++++
T Consensus 19 ~~~~~~~~~~~~~~~--------~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~ 90 (377)
T TIGR00890 19 VYTWTLLAPPLGRYF--------GVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADS 90 (377)
T ss_pred HhhhhhHHHHHHHHh--------CCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHH
Confidence 345567778777666 556677899999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHh----hhhHHHHHHHHHH
Q 011514 104 ISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF----LSTTSAFQAATIV 179 (484)
Q Consensus 104 ~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~----l~~~~~f~~~~~~ 179 (484)
++.+++.|++.|++. +...+.....+.|+.| |+|+++.++.....++|..+++.+.+. .+||+.|++.+++
T Consensus 91 ---~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~ 165 (377)
T TIGR00890 91 ---LAALYLTYGLASAGV-GIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGII 165 (377)
T ss_pred ---HHHHHHHHHHHhHHH-HHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 889999999999755 5555677788888887 679999999999999998765444433 3799999999988
Q ss_pred HHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHHHHHHhhccchhHHHHHHHHHHh
Q 011514 180 SMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSG 259 (484)
Q Consensus 180 ~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (484)
.++..+..++.+||+++++++++ ++ .+++..+ .+...++|.++...+..++..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~----------------~~-------~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 218 (377)
T TIGR00890 166 FLLVIVLGAFLIGYPPGQLIKTN----------------IE-------VSVKDYT----VWEMLRTPQFWVLYLSFFLNA 218 (377)
T ss_pred HHHHHHHHHHheecCchhccccC----------------cc-------cchhhhh----HHHHHcCccHHHHHHHHHHHh
Confidence 88877777776766543221110 00 0000011 122456677776666666665
Q ss_pred chhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhhccchhhH
Q 011514 260 LSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVI 339 (484)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (484)
........+.+.|.++ +|.+..+.+...+...+...+++ +..+++.||++||+.+..+..+..++.+.+...++....
T Consensus 219 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (377)
T TIGR00890 219 VSGLLLIGLYKPYGQS-LGLSDGFLVLAVSISSIFNGGGR-PFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDV 296 (377)
T ss_pred HHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhH
Confidence 5555556667777655 58888888899999999999988 777999999999999888888888877766655432210
Q ss_pred HHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHH
Q 011514 340 KIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGIS 419 (484)
Q Consensus 340 ~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~ 419 (484)
. ......+.+++.+...+...++..|.+|+++|+++.|+.+...
T Consensus 297 ----------~--------------------------~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 340 (377)
T TIGR00890 297 ----------L--------------------------FLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAK 340 (377)
T ss_pred ----------H--------------------------HHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHH
Confidence 0 0222335566666666677788899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCcccCchHHHHHHHHHHH
Q 011514 420 SFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMV 460 (484)
Q Consensus 420 ~lg~~~gp~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (484)
++|..++|.+.|.+.+.. ++.. .|.+.+++.++
T Consensus 341 ~~g~~~~~~~~g~l~~~~-g~~~-------~f~~~~~~~~~ 373 (377)
T TIGR00890 341 AVAGIFGGLIASHALTEI-GFEY-------TFIVTGAFALT 373 (377)
T ss_pred HHHHHHHHHHHHHHHhhh-chhh-------HHHHHHHHHHH
Confidence 999999999999999876 5554 44555555444
No 35
>PRK12382 putative transporter; Provisional
Probab=100.00 E-value=5.9e-31 Score=258.81 Aligned_cols=366 Identities=14% Similarity=0.139 Sum_probs=261.4
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhH
Q 011514 6 EIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLT 85 (484)
Q Consensus 6 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~ 85 (484)
+++.+..+.+..++..++.++..|.+|.+.++.+ +.+..+.|++.+.+.++..++++++|+++||+||||++.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~l-------g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~ 85 (392)
T PRK12382 13 ANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDL-------GFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSAL 85 (392)
T ss_pred ccccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhc-------CCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHH
Confidence 4667778888889999999999999998875443 555677899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH---hccc--hhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHH
Q 011514 86 LPLTLSIIPLAILA---YRRS--ISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCG 160 (484)
Q Consensus 86 ~~~~~~~i~~~~~~---~~~~--~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig 160 (484)
.+.+...++.+.+. ..++ ...++.+++.|+++|++. +...+...+++.|+.|+|+|++++++.+.+.+.|..+|
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~-~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g 164 (392)
T PRK12382 86 QGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGE-SQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAG 164 (392)
T ss_pred HHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHH
Confidence 99887776654332 2211 112788999999999755 66667888999999999999999999999999999999
Q ss_pred HHhhHh----hhhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchH
Q 011514 161 TLAARF----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIR 236 (484)
Q Consensus 161 ~~l~~~----l~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (484)
|.+++. .+||..+.+..+..++.... ....||+++ ++ +++++.+
T Consensus 165 ~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~----------------------------~~~~~~~ 212 (392)
T PRK12382 165 APLGLLLHSHFGFAALALTTMVLPLLAWAF-NGTVRKVPA---HA----------------------------GERPSLW 212 (392)
T ss_pred HHHHHHHHhccChHHHHHHHHHHHHHHHHH-HHhccCCCC---Cc----------------------------ccCchHH
Confidence 988875 47887766554333222211 111222111 00 0001222
Q ss_pred HHHHHhhccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHH
Q 011514 237 DLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLL 316 (484)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~ 316 (484)
+..+.+++ +. +..++..........+.|.|+++. |++. .+......+++..+++ +..+++.||+++|+.+
T Consensus 213 ~~~~~~~~-~~-----~~~~l~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~-~~~g~l~~r~g~~~~~ 282 (392)
T PRK12382 213 SVVGLIWK-PG-----LGLALQGVGFAVIGTFVSLYFASK-GWAM--AGFTLTAFGGAFVLMR-VLFGWMPDRFGGVKVA 282 (392)
T ss_pred HHHHHHHH-hH-----HHHHHHHHHHhHHHHHHHHHHHhc-CCch--hHHHHHHHHHHHHHHH-HHHHHHHHhcCCCeeh
Confidence 32222221 11 122223334445566778888764 6654 3555666677777777 6679999999999998
Q ss_pred HHhHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHH
Q 011514 317 SLGLFAACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFR 396 (484)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 396 (484)
..+..+..++...+.+.++.+. ......+.+++.+...+...
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~--------------------------------------~~~~~~l~g~~~~~~~~~~~ 324 (392)
T PRK12382 283 IVSLLVETVGLLLLWLAPTAWV--------------------------------------ALAGAALTGAGCSLIFPALG 324 (392)
T ss_pred HHHHHHHHHHHHHHHHcccHHH--------------------------------------HHHHHHHHHHHHHhHHHHHH
Confidence 8888888887777666554433 13344567777777788888
Q ss_pred HHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHHHHHH
Q 011514 397 SIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLM 467 (484)
Q Consensus 397 ~~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (484)
+...+..|+++||++.|+.+....++..++|.+.|.+.|+. +++. .|.+.+++.+++....+.
T Consensus 325 ~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~-g~~~-------~~~~~~~~~~~~~~~~~~ 387 (392)
T PRK12382 325 VEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSF-GYPS-------VFLAGAISAVLGIIVTIL 387 (392)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchH-------HHHHHHHHHHHHHHHHHh
Confidence 88899999999999999999999999999999999999986 5554 445665555555555443
No 36
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=100.00 E-value=1.7e-30 Score=256.05 Aligned_cols=376 Identities=12% Similarity=0.130 Sum_probs=267.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhH
Q 011514 6 EIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLT 85 (484)
Q Consensus 6 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~ 85 (484)
++|.+....++.++...+.+...+.++.+.+|+ +.+..+.|++.+.+.++..+++++.|+++||+||||++.
T Consensus 11 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--------g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~ 82 (402)
T TIGR00897 11 IPLNLLWGYIGVVVFMTGDGLEQGWLSPFLKAL--------GLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMM 82 (402)
T ss_pred CCchhhHHHHHHHHHHHhhhhHHHhHHHHHHHh--------CCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHH
Confidence 577888899999999999988888888888765 455567899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH---hc-cchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHH-hHH
Q 011514 86 LPLTLSIIPLAILA---YR-RSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASF-VCG 160 (484)
Q Consensus 86 ~~~~~~~i~~~~~~---~~-~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~-~ig 160 (484)
.+..+.+++.+++. .. ++ ++.+++.|++.|++. +...+...+.+.|..|+|+|++++|+.+...++|. ++|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~i~G~g~-~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g 158 (402)
T TIGR00897 83 IGLLLWCVGHAAFIVFGLGHAN---YPLILLFYGIRGLGY-PLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFG 158 (402)
T ss_pred HHHHHHHHHHHHHHHHhccCcc---HHHHHHHHHHHHcch-HHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988876553 22 45 677889999999755 55556778889999999999999999999999996 688
Q ss_pred HHhhHh----hhhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchH
Q 011514 161 TLAARF----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIR 236 (484)
Q Consensus 161 ~~l~~~----l~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (484)
|.+++. .||+..++.......+..++..+..+|.+++++++ + +++.++.+
T Consensus 159 ~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~--------~~~~~~~~ 212 (402)
T TIGR00897 159 SYYSSYAIPAFGEMNTLWSALAFVLTGGVIALFSNKDIFTPQHMQ------------------T--------REKFSELG 212 (402)
T ss_pred HHHHHhcccccchHHHHHHHHHHHHHHHHHHHhccCCCCCccccc------------------C--------CcchhhHH
Confidence 888764 46665555444333333333444444432211100 0 00011222
Q ss_pred HHHHHhhccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHH
Q 011514 237 DLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLL 316 (484)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~ 316 (484)
+..+.+.++|.++...+..++.........++.|.|.++ +|+++.+.+.......++..++. +..++++||+++|+..
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~ig~-~~~g~l~dr~~~~~~~ 290 (402)
T TIGR00897 213 KAATILFTNPNVLLGGMVRIINTIGLFGFAVFLPMFVAE-LGFSTSEWLQIWGTFFFTNIVFN-VIFGIVGDKLGWMNTV 290 (402)
T ss_pred HHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhHHHHHHHHHHHHHHHHH-HHHHHHHHhhcchhHH
Confidence 334456778888887777777777777888899999876 69999998888888889899998 6679999999988765
Q ss_pred H-HhHHHHHHHHHHHhhc-----cchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhh
Q 011514 317 S-LGLFAACINMFICSIS-----WSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVF 390 (484)
Q Consensus 317 ~-~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 390 (484)
. .+.....+....+... ++.+. ......+.|.+.+.
T Consensus 291 ~~~~~l~~~~~~~~l~~~~~~~~~~~~~--------------------------------------~~~~~~~~G~~~~~ 332 (402)
T TIGR00897 291 RWFGGVGCGIFTLALYYIPQHFGHSFAV--------------------------------------ALIIAIALGIFLAG 332 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCcHHH--------------------------------------HHHHHHHHHHHHHH
Confidence 3 2333333322222211 11222 12333455555554
Q ss_pred hhhHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHHHHHHhc
Q 011514 391 ATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMS 469 (484)
Q Consensus 391 ~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (484)
..+ ......+. ++++||++.|+.+...++++.++|.+.|.+.|.. +... .+.+.+++.+++.....+.|
T Consensus 333 ~~~-~~~~~~~~-~~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~-g~~~-------~~~~~a~~~~i~~~~~~~~~ 401 (402)
T TIGR00897 333 YVP-LAAVFPTL-APKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFF-GAIG-------VVWIFAALYVVSAFLTAFIR 401 (402)
T ss_pred HHH-HHHHHHhh-CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-chHH-------HHHHHHHHHHHHHHHHHHhc
Confidence 444 34555565 4578999999999999999999999999999986 4333 44566666666555555443
No 37
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=100.00 E-value=3.9e-32 Score=263.13 Aligned_cols=343 Identities=24% Similarity=0.313 Sum_probs=265.9
Q ss_pred HHHHHHHHHHHHHhhHhhHHH-HHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHHH
Q 011514 13 LFVTVFLWGFATMMVVPAITD-VTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLS 91 (484)
Q Consensus 13 l~~~~~~~~~~~~~~~~~l~~-~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~ 91 (484)
+++..++..++.....+.+|. +.+++ +.+..+.|++.+++.++..+++++.|+++||+|||+++..+.++.
T Consensus 1 L~l~~~~~~~~~~~~~~~~~~~~~~~~--------~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~ 72 (352)
T PF07690_consen 1 LFLAFFLSGFGFSIISPALPLYLAEEL--------GLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLF 72 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HHHCCS--------TTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHcc--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhh
Confidence 356778888999999999994 44332 445556799999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHhh----
Q 011514 92 IIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL---- 167 (484)
Q Consensus 92 ~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l---- 167 (484)
+++.++..++++ .+.+++.|++.|++. +...+...+++.|++|+|+|++++++.+...++|.++||.+++.+
T Consensus 73 ~~~~~~~~~~~~---~~~~~~~~~l~g~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~ 148 (352)
T PF07690_consen 73 ALGSLLLAFASN---FWLLLIARFLLGIGS-GFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYF 148 (352)
T ss_dssp HHHHHHHHHHCC---HHHHHHHHHHHHHHH-HHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHC
T ss_pred hhHHHHhhhhhh---HHHHhhhcccccccc-ccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhcc
Confidence 999666666677 678999999999765 777789999999999999999999999999999999999999874
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHHHHHHhhccch
Q 011514 168 STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVT 247 (484)
Q Consensus 168 ~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (484)
+||++|++.+++.++..++...++++++++++++++.++. .+++++.++.++.++++|.
T Consensus 149 ~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~ 207 (352)
T PF07690_consen 149 GWRWAFLISAILSLIAAILFILFLPEPPPPRERESPKESE---------------------SKKPKPLKPGFKSLFKNPV 207 (352)
T ss_dssp HHCCHHHHHHHHHHHHHHHHHCCC---STTTT--SSTTTT-----------------------HHHCCCH-CTHHHHHHC
T ss_pred ccccccccccchhhhhhhhHhhhhhhcccccccccccccc---------------------cccccccccccccccccch
Confidence 7999999999888888775555566655544332110000 0011111222333666677
Q ss_pred hHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcC-hhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHH
Q 011514 248 LSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFN-KNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACIN 326 (484)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~ 326 (484)
++......++..+.......+.|.|+++.+|++ ..+.+......++...++. ++.+++.||+++++..........+.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~ 286 (352)
T PF07690_consen 208 LWILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGS-LLAGRLSDRFGRRRRLLIAILLLILG 286 (352)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHH-HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCcHHHHHHHHHHHHHH
Confidence 765555666666677778889999988888999 7888999999999999998 77799999999888777777666666
Q ss_pred HHHHhhccch---hhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhccc
Q 011514 327 MFICSISWSA---WVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQV 403 (484)
Q Consensus 327 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 403 (484)
...+...... .. ......+.|++.+...+...+...+.+
T Consensus 287 ~~~~~~~~~~~~~~~--------------------------------------~~~~~~~~g~~~~~~~~~~~~~~~~~~ 328 (352)
T PF07690_consen 287 ALGLLLLPFSSSPVW--------------------------------------LIIALFLIGFGFGIVFPILFSLIQELV 328 (352)
T ss_dssp HHHHCCSHHHCHHHH--------------------------------------HHHHHHHHHHHHHHHCHHHHHHHHCCC
T ss_pred HHHHHHHHHhhhHHH--------------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 6655544332 22 134555788888889999999999999
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHH
Q 011514 404 GPNEQGKAQGCISGISSFANIVSP 427 (484)
Q Consensus 404 p~~~~g~~~g~~~~~~~lg~~~gp 427 (484)
|++++|++.|+.+...+++..+||
T Consensus 329 ~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 329 PPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCC
Confidence 999999999999999999999987
No 38
>PRK15075 citrate-proton symporter; Provisional
Probab=100.00 E-value=1.3e-30 Score=259.30 Aligned_cols=362 Identities=13% Similarity=0.028 Sum_probs=242.2
Q ss_pred chhhHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHH-HHHHHHHHHHHHHHhhhhhcccccCchhH
Q 011514 5 KEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSG-FQQAIIGLGTLVMMPVIGNLSDQYGRKAM 83 (484)
Q Consensus 5 ~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g-~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~ 83 (484)
.|++....++++.+++.++.....+..|.+.+|+ +.++.+......+ .......+...+++++.|+++||+|||+.
T Consensus 12 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~ 88 (434)
T PRK15075 12 SKARAILRVTSGNFLEMFDFFLFGFYATAIAKTF---FPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKG 88 (434)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---CCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHH
Confidence 3456677788899999999999999999998887 4433333211111 12233344556788999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhccchhh-----HHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHh
Q 011514 84 LTLPLTLSIIPLAILAYRRSISF-----FYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFV 158 (484)
Q Consensus 84 l~~~~~~~~i~~~~~~~~~~~~~-----~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ 158 (484)
++.+.++..++.+++++++++.. ...+++.|+++|++. +...+....+++|++|+++|++++++.+...++|..
T Consensus 89 l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~-g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~ 167 (434)
T PRK15075 89 LIVTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSA-GVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVV 167 (434)
T ss_pred HHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccc-cccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHH
Confidence 99999999999999999998321 114689999999765 666677889999999999999999999988888777
Q ss_pred HHHHhhHh------------hhhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccC
Q 011514 159 CGTLAARF------------LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKI 226 (484)
Q Consensus 159 ig~~l~~~------------l~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (484)
+|+.+++. .+||++|++..... ..........||+++..+++ +
T Consensus 168 ~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~-~~~~~~~~~~~e~~~~~~~~------------------~------ 222 (434)
T PRK15075 168 FAALLGYLLNQWLSPAQMAEWGWRIPFLIGCLIV-PFIFLIRRSLEETEEFLARK------------------H------ 222 (434)
T ss_pred HHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHH-HHHHHHHHhcCCCHHHHHhh------------------h------
Confidence 77665543 48999998765332 22222222223321100000 0
Q ss_pred cccCCCCchHHHHHHhhccchhHHH-HHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHH
Q 011514 227 PVCKKIPSIRDLICLLRSSVTLSQA-AVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPL 305 (484)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (484)
+.+.++.++...++++.+.. ....++..........+.|.|+++.+|++..+.+.......++..++. ++.++
T Consensus 223 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~g~ 296 (434)
T PRK15075 223 -----RPSMREIFRSLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWL-PIGGA 296 (434)
T ss_pred -----ccccccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 00111112223333333322 233333444555677889999998889999988888888888888888 67799
Q ss_pred hhhhhcchHHHHHhHHHHHHHHH-HHhh-ccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHH
Q 011514 306 LAPILGEAKLLSLGLFAACINMF-ICSI-SWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTA 383 (484)
Q Consensus 306 l~~~~g~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (484)
++||++||+....+..+..+... .... ...... + .......+
T Consensus 297 l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~------------~~~~~~~~ 340 (434)
T PRK15075 297 LSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSF------------------------A------------RMLAVELW 340 (434)
T ss_pred HHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCch------------------------H------------HHHHHHHH
Confidence 99999999987765544332211 1111 111111 0 00112223
Q ss_pred HHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHH-HHHHHHHHHHHHHHhh
Q 011514 384 FSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSF-ANIVSPLIFSPLTALF 437 (484)
Q Consensus 384 ~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~l-g~~~gp~i~g~l~~~~ 437 (484)
.+++.+...+....+..|..|++.|+++.|+.+..... ++.++|.+.|.+.|..
T Consensus 341 ~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~ 395 (434)
T PRK15075 341 LSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVT 395 (434)
T ss_pred HHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhc
Confidence 44555555666667889999999999999997665554 5888999999999986
No 39
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=100.00 E-value=2.3e-31 Score=269.45 Aligned_cols=375 Identities=11% Similarity=0.090 Sum_probs=288.6
Q ss_pred HHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHH
Q 011514 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPL 88 (484)
Q Consensus 9 ~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~ 88 (484)
....++++.++..++..+..+.+|.+.+++ +.+..+.|++.+.+.++..++.++.|+++||+|||+.+..+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~--------g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~ 74 (485)
T TIGR00711 3 LTIVLMLGTFMAVLDSTIVNVAIPTIAGDL--------GSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLIST 74 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--------CCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHH
Confidence 455667788889999999999999998776 334456699999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHh--
Q 011514 89 TLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF-- 166 (484)
Q Consensus 89 ~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~-- 166 (484)
++..++.++++++++ ++.+++.|+++|++. +...+...+++.|++|+++|++++++......+|..+||.+++.
T Consensus 75 ~~~~~~~~~~~~~~~---~~~l~~~~~~~G~~~-~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 150 (485)
T TIGR00711 75 FAFTLGSLLCGVAPN---LELMIIFRVIQGFGG-GPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWII 150 (485)
T ss_pred HHHHHHHHHHhCcCC---HHHHHHHHHHHHhhh-hhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhc
Confidence 999999999999999 889999999999765 67778999999999999999999999999999999999998876
Q ss_pred --hhhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCccc---------ccccccCCCCCCCCcc----------
Q 011514 167 --LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIIT---------EETEGVNQNESNSPVK---------- 225 (484)
Q Consensus 167 --l~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~---------- 225 (484)
.+||+.|++.+.+.++..+...+..||+++.++++.|..+... ....+.++.++.++..
T Consensus 151 ~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (485)
T TIGR00711 151 ENYHWRWIFLINVPIGIIVVVVAFFILPRDKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLV 230 (485)
T ss_pred cCcCceehhhhhhHHHHHHHHHHHHHcCCccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHH
Confidence 4899999998888877777777777775443222211100000 0000000111100000
Q ss_pred ------CcccCCCCchHHHHHHhhccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHH
Q 011514 226 ------IPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQ 299 (484)
Q Consensus 226 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 299 (484)
..+.+++++..+ .+ ..++|.++...+..++..+.......+.|.|+++.+|+++.+.+.......++..++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~ 308 (485)
T TIGR00711 231 AIIAFVVWELTDDNPLVD-LR-LFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSS 308 (485)
T ss_pred HHHHHHHHHHcCCCCccC-HH-HHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence 000011111111 11 4566777777777788777778888899999999999999999999999999888888
Q ss_pred HHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhhc--cc--hhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhcc
Q 011514 300 LLFMPLLAPILGEAKLLSLGLFAACINMFICSIS--WS--AWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFM 375 (484)
Q Consensus 300 ~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 375 (484)
++.+++.||+++|+.+..+..+.+++...+.+. .+ .+.
T Consensus 309 -~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~------------------------------------- 350 (485)
T TIGR00711 309 -PIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDTPFLA------------------------------------- 350 (485)
T ss_pred -HHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCCCHHH-------------------------------------
Confidence 777999999999999988888888877776532 11 111
Q ss_pred chhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 011514 376 QVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 436 (484)
Q Consensus 376 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~ 436 (484)
......+.|++.+...+.......+..|++++|++.|+.+..+.+|+.+|+.+.|.+.++
T Consensus 351 -~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 351 -IALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 133345677888877777777778889999999999999999999999999999999875
No 40
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=100.00 E-value=1.9e-30 Score=254.74 Aligned_cols=351 Identities=16% Similarity=0.125 Sum_probs=269.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhH
Q 011514 6 EIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLT 85 (484)
Q Consensus 6 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~ 85 (484)
+++....+....++...+..+..|.+|.+.+++ +.+..+.|++.+.+.++..+++++.|+++||+|||+.+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~--------g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~ 74 (385)
T TIGR00710 3 AKAFALLLGCLSILGPLGIDMYLPAFPEIAADL--------STPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLL 74 (385)
T ss_pred chHHHHHHHHHHHHHHHHHHHhcccHHHHHHHh--------CCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHH
Confidence 344555555566777788899999999998776 445567799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhH
Q 011514 86 LPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAAR 165 (484)
Q Consensus 86 ~~~~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~ 165 (484)
.+.++.+++.+++.++++ ++.+++.|++.|++. +...+...+++.|++|+++|++++++.+....+|..+||.+++
T Consensus 75 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 150 (385)
T TIGR00710 75 LGLFIFALSSLGLALSNN---IETLLVLRFVQAFGA-SAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGG 150 (385)
T ss_pred HHHHHHHHHHHHHHHHcc---HHHHHHHHHHHHcch-hHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998 888999999999755 6677889999999999999999999999999999999998887
Q ss_pred h----hhhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHHHHHH
Q 011514 166 F----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICL 241 (484)
Q Consensus 166 ~----l~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (484)
. .+||..|++.+++..+..+..++..||++++++++ +.++..+..+.
T Consensus 151 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~ 201 (385)
T TIGR00710 151 YILVWLSWHAIFAFLSLAGILLSALIFFILPETLPYEARI-----------------------------QISTYFETFLL 201 (385)
T ss_pred HHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcccC-----------------------------CHHHHHHHHHH
Confidence 6 48999999988777777766666677654322111 00111222344
Q ss_pred hhccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHH
Q 011514 242 LRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLF 321 (484)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~ 321 (484)
..++|+++...+...+..........+.|.++++.+|+++.+.+.+.....++..++. ++.+++.||+++|+.+..+..
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~-~~~g~l~~~~~~~~~~~~~~~ 280 (385)
T TIGR00710 202 LLKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGG-FLNGRFIKKWGAKSLLRMGLI 280 (385)
T ss_pred HHcCchhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCHHHHHHHHHH
Confidence 6677887777766666666666677778888888889999999999999999888888 777999999999998888777
Q ss_pred HHHHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhc
Q 011514 322 AACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSK 401 (484)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 401 (484)
+..++...+........ ...+ .......+.+++.+...+.......|
T Consensus 281 ~~~~~~~~~~~~~~~~~---------------------~~~~------------~~~~~~~~~g~~~~~~~~~~~~~~~~ 327 (385)
T TIGR00710 281 LFAVSAVLLEITAILGL---------------------GSWA------------MIIGPMMFVGIGNSMISSIAMAYALE 327 (385)
T ss_pred HHHHHHHHHHHHHHhcc---------------------chHH------------HHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 76666555543221110 0000 01233446677777778888888888
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 011514 402 QVGPNEQGKAQGCISGISSFANIVSPLIFSP 432 (484)
Q Consensus 402 ~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~ 432 (484)
..| ++++++.++.+.....++.+.+.+.+.
T Consensus 328 ~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~~ 357 (385)
T TIGR00710 328 DFP-HVAGTASALFGTLRLVLGAIVGYLVSL 357 (385)
T ss_pred cCc-ccchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 877 679999999998887766666655653
No 41
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=3.3e-31 Score=268.38 Aligned_cols=387 Identities=13% Similarity=0.105 Sum_probs=250.4
Q ss_pred HHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHH
Q 011514 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPL 88 (484)
Q Consensus 9 ~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~ 88 (484)
......++.+.+.++........|.+..+.. .++...+..+.+++.+.+.++..++++++|+++||+|||+.+..+.
T Consensus 17 ~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~ 93 (502)
T TIGR00887 17 AIVIAGVGFFTDSYDLFCISLVTKMLGYVYY---HGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMEL 93 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHH
Confidence 3445566778888888888888887665432 1223455667799999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccchh---hHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhH
Q 011514 89 TLSIIPLAILAYRRSIS---FFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAAR 165 (484)
Q Consensus 89 ~~~~i~~~~~~~~~~~~---~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~ 165 (484)
++..++.++++++++.. .++.++++|+++|++. +...+....+++|++|+++|+++.++.+....+|.++|+.++.
T Consensus 94 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~-g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~ 172 (502)
T TIGR00887 94 IIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGI-GGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVAL 172 (502)
T ss_pred HHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHH-hhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888876421 1478899999999866 6666889999999999999999999999999999988887654
Q ss_pred h---------------------------hhhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCC-Cccc---cccc-
Q 011514 166 F---------------------------LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTR-PIIT---EETE- 213 (484)
Q Consensus 166 ~---------------------------l~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~-~~~~---~~~~- 213 (484)
. .+||+++.+.++..++ .++..+++||+|++...+++.+ +..+ ...+
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i-~~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~ 251 (502)
T TIGR00887 173 IVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALL-ALYFRLTIPETPRYTADVAKDVEQAASDMSAVLQV 251 (502)
T ss_pred HHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHH-HHHHHHhCCCCHHHHHHhCcchHHHHHHHHHHhcc
Confidence 2 2699999877755544 4444567999998633222211 1111 0000
Q ss_pred c-cCCCCCCCCccCcccCCCCchHHHHHHhhccchhHHH---HHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHH---
Q 011514 214 G-VNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQA---AVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFAD--- 286 (484)
Q Consensus 214 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--- 286 (484)
+ .++.++.++.+++.++...++++.++...+++..... ....+...+.+++...+.|.++++. |++..+.+.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~~-G~~~~~~~~~~~ 330 (502)
T TIGR00887 252 KIEAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSAI-GYSPPAATNNAY 330 (502)
T ss_pred ccccCcccccchhccccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHH-cCCCCccchhHH
Confidence 0 0000000000000011112344433322122221211 2222333334445555678878654 876543211
Q ss_pred ---------HHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhh
Q 011514 287 ---------LMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVIKIFFNKVFKLLLLSFITR 357 (484)
Q Consensus 287 ---------~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 357 (484)
......++.+++. ++.+++.||+|||+.+..+..+..+++.++......... + ..
T Consensus 331 ~~~~~~~~~~~~~~~~~~i~g~-~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~~----~---~~-------- 394 (502)
T TIGR00887 331 EELYKTAVGNLIIALAGTVPGY-WVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLST----H---GF-------- 394 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhcch----h---HH--------
Confidence 1222233344455 777999999999999888877776666555433211000 0 00
Q ss_pred hhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 011514 358 KQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 436 (484)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~ 436 (484)
+........++.....+..+.+..|.+|++.|+++.|+.+.++.++++++|.+.+.+.+.
T Consensus 395 -------------------~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~ 454 (502)
T TIGR00887 395 -------------------LAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQH 454 (502)
T ss_pred -------------------HHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhcc
Confidence 011111111222234556677789999999999999999999999999999999999885
No 42
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=8.8e-32 Score=271.93 Aligned_cols=380 Identities=13% Similarity=0.111 Sum_probs=253.1
Q ss_pred HHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHH
Q 011514 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPL 88 (484)
Q Consensus 9 ~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~ 88 (484)
......++.+.+.++...+.+..|.+.+++..+-..+.+.+..+.|++.+++.++..++++++|+++||+|||+++..+.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~ 92 (479)
T PRK10077 13 ITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAA 92 (479)
T ss_pred HHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 34455666777888888888888888776643334455777888999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhc---------cchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhH
Q 011514 89 TLSIIPLAILAYR---------RSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVC 159 (484)
Q Consensus 89 ~~~~i~~~~~~~~---------~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~i 159 (484)
++..++.+..++. ++.+.++.+++.|+++|++. |...|...++++|++|+++|++++++.+....+|..+
T Consensus 93 ~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~-g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~ 171 (479)
T PRK10077 93 VLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGV-GLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLV 171 (479)
T ss_pred HHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhH-hHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHH
Confidence 9999998887763 23333567889999999765 7777899999999999999999999999999999998
Q ss_pred HHHhhHh------------hhhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCc
Q 011514 160 GTLAARF------------LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIP 227 (484)
Q Consensus 160 g~~l~~~------------l~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (484)
++.++.. .+||++|++.++..++..+ ..+++||+|++..++++.++......+..... +..
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~-~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~---~~~--- 244 (479)
T PRK10077 172 VYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLM-LLYFVPETPRYLMSRGKQEQAEGILRKIMGNT---LAT--- 244 (479)
T ss_pred HHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHH-HHHcCCCCcHHHHHcCCHHHHHHHHHHHcCCh---hHH---
Confidence 8876542 4899999998876666544 45668998754222111111000000000000 000
Q ss_pred ccCCCCchHHHHHH-hhccchhH-----HHH----HHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHH
Q 011514 228 VCKKIPSIRDLICL-LRSSVTLS-----QAA----VVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTI 297 (484)
Q Consensus 228 ~~~~~~~~~~~~~~-~~~~~~~~-----~~~----~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 297 (484)
+..++.++..+. ..+.+..+ ... ...+...........+.|.+.++ .|.+..+........++...+
T Consensus 245 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~-~g~~~~~~~~~~~~~~~~~~i 321 (479)
T PRK10077 245 --QALQEIKHSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKT-LGASTDIALLQTIIVGVINLT 321 (479)
T ss_pred --HHHHHHHHHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHH-cCCCCchHHHHHHHHHHHHHH
Confidence 000001111000 00000100 001 01111111122233445665554 588877767776777777788
Q ss_pred HHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccch
Q 011514 298 SQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQV 377 (484)
Q Consensus 298 ~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 377 (484)
+. ++.+++.||+|||+.+..+..+.+++.+.+........ ...+ .
T Consensus 322 ~~-~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~---------------------~~~~-------------~ 366 (479)
T PRK10077 322 FT-VLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQA---------------------PGIV-------------A 366 (479)
T ss_pred HH-HHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCc---------------------ccHH-------------H
Confidence 87 77799999999999999999888887776653321110 0000 0
Q ss_pred hhHHHHHHHhhhh-hhhHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011514 378 PYATTAFSVLVVF-ATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLT 434 (484)
Q Consensus 378 ~~~~~~~g~~~~~-~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~ 434 (484)
.....+.+.+.+. ..|..+.+++|.+|+++|+++.|+.+..+++++++++.+.+.+.
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~ 424 (479)
T PRK10077 367 LLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMD 424 (479)
T ss_pred HHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 2222233333332 34677899999999999999999999999999999988877655
No 43
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=100.00 E-value=1.6e-31 Score=261.39 Aligned_cols=366 Identities=14% Similarity=0.062 Sum_probs=264.1
Q ss_pred HHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHHHHHHHH
Q 011514 17 VFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLA 96 (484)
Q Consensus 17 ~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~i~~~ 96 (484)
.+...+......+..|.+.+++ +.+..+.|++.+++.++..++.++.|+++||+|||+.+..+.++.+++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~--------g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 75 (379)
T TIGR00881 4 YAAYYLVRKNFALAMPYLVEEI--------GLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNL 75 (379)
T ss_pred hhHHHHhHHhhhhhhHHHHHHh--------CCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHH
Confidence 3455556666677777777665 44556779999999999999999999999999999999999999999999
Q ss_pred HHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHH-HhhHh----hhhHH
Q 011514 97 ILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGT-LAARF----LSTTS 171 (484)
Q Consensus 97 ~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~-~l~~~----l~~~~ 171 (484)
+++++++ ++.+++.|++.|++. +...+...+++.|+.|+++|++++++.+....+|..++| .++.. .+||+
T Consensus 76 ~~~~~~~---~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 151 (379)
T TIGR00881 76 FFGFSTS---LWVMAALWALNGIFQ-GMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHW 151 (379)
T ss_pred HHHHhhh---HHHHHHHHHHHHhhc-cccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchh
Confidence 9999998 889999999999755 666788999999999999999999999999999999999 45443 48999
Q ss_pred HHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHHHHHHhhccchhHHH
Q 011514 172 AFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQA 251 (484)
Q Consensus 172 ~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (484)
.|++.+++.++..+..++..||++++++.++++++. +++.+++. ++.+++.+..+...+...++|.++..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (379)
T TIGR00881 152 VFIVPGIIAIIVSLICFLLLRDSPQSCGLPPAEEMP--------NEEPDGDA--EKKEEELTKKQIFLQYVLLNKVLWYI 221 (379)
T ss_pred HHHHHHHHHHHHHHHHheeeCCCccccccCccccCc--------cccccccc--ccccccccchHHHHHHHHhcchHHHH
Confidence 999988777777777777777766543221110000 00000000 00011111222334446677888888
Q ss_pred HHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcc-hHHHH-HhH-HHHHHHHH
Q 011514 252 AVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGE-AKLLS-LGL-FAACINMF 328 (484)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~-~~~~~-~~~-~~~~~~~~ 328 (484)
.+..++..........+.|.|+++.+|+++.+.+...+...++..++. ++.+++.||..+ |+... ... ....++..
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~ 300 (379)
T TIGR00881 222 SLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGT-LLAGWLSDKLFNGRRGPLAVFFMALIIVSLL 300 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhH-HHHHHHHHHHcCCcchHHHHHHHHHHHHHHH
Confidence 888888887888888899999999889999999999999999998888 777999998633 33222 111 11222222
Q ss_pred HHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCch
Q 011514 329 ICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQ 408 (484)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~ 408 (484)
.......... .+ ........+.......+.......|..|+++|
T Consensus 301 ~~~~~~~~~~-----------------------~~-------------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 344 (379)
T TIGR00881 301 VYWLNPAANP-----------------------LM-------------DLICLFALGFLVYGPQMLIGVIASELAPKKAA 344 (379)
T ss_pred HHhcCcchhH-----------------------HH-------------HHHHHHHHHHHHhhhhHHHHHHHHHhcCcchh
Confidence 2222111111 00 12223344444444555566788999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 011514 409 GKAQGCISGISSFANIVSPLIFSPLTALFLSKGA 442 (484)
Q Consensus 409 g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~ 442 (484)
|++.|+.+...+++..++|.+.|.+.|.. +++.
T Consensus 345 g~~~g~~~~~~~~g~~~~~~~~g~l~~~~-g~~~ 377 (379)
T TIGR00881 345 GTAAGFVGFFAYLGGILAGLPLGYLADGF-GWAG 377 (379)
T ss_pred HHHHHHHHHhhhhhhhhhhhhHHHHHHhh-cccc
Confidence 99999999999999999999999999986 5543
No 44
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=100.00 E-value=2.1e-31 Score=268.95 Aligned_cols=414 Identities=14% Similarity=0.088 Sum_probs=265.6
Q ss_pred HHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHHHHHHH
Q 011514 16 TVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPL 95 (484)
Q Consensus 16 ~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~i~~ 95 (484)
+.++..++.....+.+|....++.-....+.+.+..+.|++.+++.++..++++++|+++||+|||+++..+.++..++.
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~ 115 (481)
T TIGR00879 36 GGLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGA 115 (481)
T ss_pred HHHhcccccchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHH
Confidence 33445556667777777777665211112234556788999999999999999999999999999999999999999999
Q ss_pred HHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhh---Hh----hh
Q 011514 96 AILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAA---RF----LS 168 (484)
Q Consensus 96 ~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~---~~----l~ 168 (484)
+++.+..+...++.+++.|+++|++. +...+...++++|++|+++|++++++.+....+|..+++.++ .. .+
T Consensus 116 ~~~~~~~~~~~~~~~~~~r~l~G~~~-~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~ 194 (481)
T TIGR00879 116 ILMGLAAFALSVEMLIVGRVLLGIGV-GIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLG 194 (481)
T ss_pred HHHHHhccccchHHHHHHHHHHHhhh-hHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCcc
Confidence 99876655333568899999999755 677788999999999999999999999999999999999988 33 58
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCc-c----------CcccCCCCchHH
Q 011514 169 TTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPV-K----------IPVCKKIPSIRD 237 (484)
Q Consensus 169 ~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----------~~~~~~~~~~~~ 237 (484)
||++|++.++..++ .+...+++||+++....+++.++......+..+..+++... + .+.+...+..++
T Consensus 195 w~~~f~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (481)
T TIGR00879 195 WRIPLGLQLIPAGL-LFLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQPSWGS 273 (481)
T ss_pred HHHHHHHHHHHHHH-HHHHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhccccHHH
Confidence 99999996654444 44455668887653211111111000000000000000000 0 000000111222
Q ss_pred HHHHhh--ccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHH
Q 011514 238 LICLLR--SSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKL 315 (484)
Q Consensus 238 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~ 315 (484)
.++... +++.++...+..+...........+.|.+.++ .|++..+.+.......++..++. ++.+++.||+++|+.
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~-~~~g~l~d~~~~~~~ 351 (481)
T TIGR00879 274 LFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFEN-AGVSTDHAFLVSIIVGAVNFAFT-FVAIFLVDRFGRRPL 351 (481)
T ss_pred HHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHH-cCCCchHHHHHHHHHHHHHHHHH-HHHHHHHHHhcchHH
Confidence 111111 12223333333333333334455566666655 59999888888888888888888 777999999999999
Q ss_pred HHHhHHHHHHHHHHHhhc---cchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHh-hhhh
Q 011514 316 LSLGLFAACINMFICSIS---WSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVL-VVFA 391 (484)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~ 391 (484)
+..+..+.+++.+.+... ..... + +..... ......+...+ ....
T Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~----------------~~~~~~--------------~~~~~~~~~~~~~~~~ 400 (481)
T TIGR00879 352 LLIGAAGMAICLFVLGILGASFVTGS-S----------------KSSGNV--------------AIVFILLFIAFFAMGW 400 (481)
T ss_pred HHHHHHHHHHHHHHHHHHhhcccCCc-c----------------cchhHH--------------HHHHHHHHHHHHHccc
Confidence 888877777776666521 11100 0 000000 01111122222 2223
Q ss_pred hhHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHHHHHHhccC
Q 011514 392 TPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSHT 471 (484)
Q Consensus 392 ~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (484)
.+....+..|..|+++|+++.|+.+...+++++++|.+.+.+.+.. ++... |.+.+++.+++.+......++
T Consensus 401 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~-~~~~~-------f~~~~~~~~~~~i~~~~~~~~ 472 (481)
T TIGR00879 401 GPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESI-GVGGV-------FIFFGGLNVLGLIFVYFFLPE 472 (481)
T ss_pred cCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-Cccce-------ehhHHHHHHHHHHHHheeccc
Confidence 4666677799999999999999999999999999999999999875 55443 355555555555555444444
Q ss_pred C
Q 011514 472 P 472 (484)
Q Consensus 472 ~ 472 (484)
+
T Consensus 473 ~ 473 (481)
T TIGR00879 473 T 473 (481)
T ss_pred C
Confidence 3
No 45
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=100.00 E-value=8e-30 Score=250.93 Aligned_cols=352 Identities=15% Similarity=0.099 Sum_probs=264.3
Q ss_pred CCCcchhhHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCc
Q 011514 1 MGMEKEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGR 80 (484)
Q Consensus 1 m~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Gr 80 (484)
|+.++.+|.+.......++..+......|.+|.+.+++ +.+..+.|++.+.+.++..++++++|+++||+||
T Consensus 1 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~--------~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~gr 72 (394)
T PRK11652 1 MKRQRNVNLLFMLVLLVAVGQMAQTIYVPAIADMARDL--------NVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGR 72 (394)
T ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHh--------CCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCC
Confidence 54455566677777777777788889999999998776 5556677999999999999999999999999999
Q ss_pred hhHhHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHH
Q 011514 81 KAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCG 160 (484)
Q Consensus 81 k~~l~~~~~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig 160 (484)
|+.+..+.....++.+++.++++ ++.+++.|++.|++. +...+....+..|..++++|+++++..+.+..++..+|
T Consensus 73 r~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 148 (394)
T PRK11652 73 RPVILVGMSIFILGTLVALFAHS---LTVLIAASAIQGLGT-GVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLA 148 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHcc---HHHHHHHHHHHHhhh-hHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988 888999999999755 56667788899999999999999999999999999999
Q ss_pred HHhhHh----hhhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchH
Q 011514 161 TLAARF----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIR 236 (484)
Q Consensus 161 ~~l~~~----l~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (484)
|.+++. .+||++|++.++...+..+...+..||+++.++++ ++.+
T Consensus 149 ~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------~~~~ 197 (394)
T PRK11652 149 PLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPETRPADARR-------------------------------TRVL 197 (394)
T ss_pred HHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCccCccccch-------------------------------hHHH
Confidence 988876 48999999988777666665566677754322111 0123
Q ss_pred HHHHHhhccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHH
Q 011514 237 DLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLL 316 (484)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~ 316 (484)
+.++...++|.++...+..+........+....+.+.++.+|+++.+.+........+..++. .+.+++.||.+++...
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~-~~~~~l~~~~~~~~~~ 276 (394)
T PRK11652 198 ASYRTLLSNRRFNCYLLMLIGTLAGIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGA-WFAGRPNKRFSTLMWQ 276 (394)
T ss_pred HHHHHHHcChHHHHHHHHHHHHHHHHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 444456677777766655555555555566677888888889999998988877777777777 6668899988733322
Q ss_pred HHhH-HHHHHHHHHHhhc--cchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhh
Q 011514 317 SLGL-FAACINMFICSIS--WSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATP 393 (484)
Q Consensus 317 ~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 393 (484)
.... ....+........ .+.+. ......+.+++.+...|
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------~~~~~~~~~~g~~~~~~ 318 (394)
T PRK11652 277 SVICCLLAGLLMWIPGWFGVMNVWT--------------------------------------LLVPAALFFFGAGMLFP 318 (394)
T ss_pred HHHHHHHHHHHHHHHHHhccccHHH--------------------------------------HHHHHHHHHHHHHHHHH
Confidence 2111 1111211111111 11222 13344567788888889
Q ss_pred HHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011514 394 SFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTA 435 (484)
Q Consensus 394 ~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~ 435 (484)
...+...+..| +++|++.++.+....+|..+++.+.+.+.+
T Consensus 319 ~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~ 359 (394)
T PRK11652 319 LATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLPQ 359 (394)
T ss_pred HHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 99998888887 688999999999999999999998887654
No 46
>TIGR00895 2A0115 benzoate transport.
Probab=100.00 E-value=5.9e-31 Score=259.29 Aligned_cols=370 Identities=15% Similarity=0.121 Sum_probs=260.7
Q ss_pred HHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHH
Q 011514 11 SHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTL 90 (484)
Q Consensus 11 ~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~ 90 (484)
...++..+...+......+..|.+.+++ +.+..+.|++.+.+.++..++.++.|+++||+|||+.+..+.++
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~ 91 (398)
T TIGR00895 20 ILSFLIMLMDGYDLAAMGFAAPAISAEW--------GLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILL 91 (398)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHhhcc--------CCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHH
Confidence 3334455556666667777788777655 44556779999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHh----
Q 011514 91 SIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF---- 166 (484)
Q Consensus 91 ~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~---- 166 (484)
..++.++..+.++ ++.+++.|++.|++. +...+...+++.|+.|+++|++++++.+....+|..+||.+++.
T Consensus 92 ~~~~~~~~~~~~~---~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 167 (398)
T TIGR00895 92 FSVFTLLCALATN---VTQLLILRFLAGLGL-GGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPV 167 (398)
T ss_pred HHHHHHHHHHccc---hHHHHHHHHHHhccc-ccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhc
Confidence 9999999999988 888899999999755 66678899999999999999999999999999999999988876
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccc-cCCCCCCCCccCcccCCCCchHHHHHHhhcc
Q 011514 167 LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEG-VNQNESNSPVKIPVCKKIPSIRDLICLLRSS 245 (484)
Q Consensus 167 l~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (484)
.+|+..|++.+++..+..+.....+||+++...++++ ++.....++. ....++.++..++.+++.+..++..+.++++
T Consensus 168 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (398)
T TIGR00895 168 FGWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSKRP-ETVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQG 246 (398)
T ss_pred ccceeehhhhhhHHHHHHHHHHHhCCCCChHHHhcCH-HHHHHHHHHHHHhccccccccccccccccchhhHHHHHHhcc
Confidence 4899999988767777777777778887653222111 1000000000 0000000000000001111122222223322
Q ss_pred ---chhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHH
Q 011514 246 ---VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFA 322 (484)
Q Consensus 246 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~ 322 (484)
+..+...+..++..........+.|.+ .+.+|+++.+.+...+...++..++. ++.+++.||+++|+........
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~ 324 (398)
T TIGR00895 247 KTARITVLLWLLYFMLLVGVYFLTNWLPKL-MVELGFSLSLAATGGALFNFGGVIGS-IIFGWLADRLGPRVTALLLLLG 324 (398)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHhhcchHHHHHHHHHH
Confidence 233334444445555556667778844 45569999999999999999999998 7779999999988544433333
Q ss_pred HHHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcc
Q 011514 323 ACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQ 402 (484)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 402 (484)
......+.....+.+. .....++.+++.+...+...++..|.
T Consensus 325 ~~~~~~~~~~~~~~~~--------------------------------------~~~~~~~~g~~~~~~~~~~~~~~~~~ 366 (398)
T TIGR00895 325 AVFAVLVGSTLFSPTL--------------------------------------LLLLGAIAGFFVNGGQSGLYALMALF 366 (398)
T ss_pred HHHHHHHHHHhhCHHH--------------------------------------HHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 3333222221223222 13445577888888889999999999
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 011514 403 VGPNEQGKAQGCISGISSFANIVSPLIFSPL 433 (484)
Q Consensus 403 ~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l 433 (484)
+|+++||++.|+.+....+|..+||.+.|.+
T Consensus 367 ~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 367 YPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 9999999999999999999999999999875
No 47
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=100.00 E-value=1.4e-29 Score=249.14 Aligned_cols=346 Identities=16% Similarity=0.131 Sum_probs=255.7
Q ss_pred hHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHH
Q 011514 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLP 87 (484)
Q Consensus 8 ~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~ 87 (484)
|.+.......+....+.....+.+|.+.++. +.+..+.|+..+.+.++..+++++.|+++||+|||+.+..+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~--------~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~ 74 (392)
T PRK10473 3 RFLLCSFALVLLYPAGIDMYLVGLPRIAADL--------NASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPG 74 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHHHHHHHh--------CCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHH
Confidence 4566677778888888889999999998876 44556779999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHh-
Q 011514 88 LTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF- 166 (484)
Q Consensus 88 ~~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~- 166 (484)
.++..++..++..+++ .+.+++.|+++|++. +...+...+++.|.+|+++|+++.++.+....+|..++|.+++.
T Consensus 75 ~~~~~i~~~~~~~~~~---~~~~~~~~~l~g~~~-~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l 150 (392)
T PRK10473 75 AALFIIASLLCSLAET---SSLFLAGRFLQGIGA-GCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLI 150 (392)
T ss_pred HHHHHHHHHHHHHhCc---HHHHHHHHHHHHhhh-hHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998 788899999999755 66667899999999999999999999999999999999988865
Q ss_pred ---hhhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHHHHHHhh
Q 011514 167 ---LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLR 243 (484)
Q Consensus 167 ---l~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (484)
.+||+.|++.+.+..+..++....+||++++++++ +....++ .+...
T Consensus 151 ~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~-~~~~~ 200 (392)
T PRK10473 151 MLKFPWQSLFYTMAAMGILVLLLSLFILKETRPARAPA-----------------------------ASSKPRE-NSESL 200 (392)
T ss_pred HhCcChHHHHHHHHHHHHHHHHHHHHHcCCCCCcccCC-----------------------------ccchHHH-HHHHH
Confidence 48999999998888777777777777764332111 0000111 11234
Q ss_pred ccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHH
Q 011514 244 SSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAA 323 (484)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~ 323 (484)
+++.++...+...+.......+..+.|.+.++.+|+++.+.+...+..++..+++. +..+++.||+++|+.+..+..+.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~-~~~~~l~~r~g~~~~~~~~~~~~ 279 (392)
T PRK10473 201 LNRFFLSRLVITTLSVTVILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVS-FSTPFALGIFKPRTLMLTSQVLF 279 (392)
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCHHHHHHHHHHHH
Confidence 45555544444444333444455667888888889999999999999999999998 67799999999999998888877
Q ss_pred HHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhccc
Q 011514 324 CINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQV 403 (484)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 403 (484)
.++.+.+......+. ......+.+.+.+...+.. ...+..
T Consensus 280 ~~~~~~~~~~~~~~~--------------------------------------~~~~~~l~~~g~~~~~~~~--~~~~~~ 319 (392)
T PRK10473 280 LAAGITLALSPSHAV--------------------------------------SLFGITLICAGFSVGFGVA--MSQALG 319 (392)
T ss_pred HHHHHHHHHHHHHHH--------------------------------------HHHHHHHHHHHHHHHhHHH--HHHHhc
Confidence 777666655443322 0222223333333333322 223445
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 011514 404 GPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSK 440 (484)
Q Consensus 404 p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~ 440 (484)
|.++|+ |..+....+++.+++.+.+++.+.. ++
T Consensus 320 ~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~~~-g~ 352 (392)
T PRK10473 320 PFSLRA---GVASSTLGIAQVCGSSLWIWLAAVL-GI 352 (392)
T ss_pred cCcccc---cHHHHHHHHHHHHHHHHHHHHHHHh-cc
Confidence 554443 4445556778888888888888876 44
No 48
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=100.00 E-value=6.8e-30 Score=252.00 Aligned_cols=343 Identities=13% Similarity=0.080 Sum_probs=252.3
Q ss_pred HHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHHHHHH
Q 011514 15 VTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIP 94 (484)
Q Consensus 15 ~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~i~ 94 (484)
+..++..++..+..|.+|.+.+++ +.+....++..+++.++..++++++|+++||+|||+++..+.++.+++
T Consensus 23 ~~~~~~~~~~~~~~p~l~~i~~~~--------~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~ 94 (413)
T PRK15403 23 LYDFAAYLTTDLIQPGIINVVRDF--------NADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLA 94 (413)
T ss_pred HHHHHHHHHHHhhccCHHHHHHHh--------CCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHH
Confidence 334555567789999999988776 444556688999999999999999999999999999999999999999
Q ss_pred HHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHh----hhhH
Q 011514 95 LAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF----LSTT 170 (484)
Q Consensus 95 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~----l~~~ 170 (484)
.+++.++++ ++.++++|+++|++. +...+...+++.|++|+++|++++++......+|..+||.+++. .+||
T Consensus 95 ~~~~~~a~~---~~~l~~~r~l~Gi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~ 170 (413)
T PRK15403 95 CAATLFTTS---MTQFLIARFIQGTSI-CFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWK 170 (413)
T ss_pred HHHHHHcCC---HHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH
Confidence 999999999 889999999999865 55556778889999999999999999999999999999988875 4899
Q ss_pred HHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHHHHHHhhccchhHH
Q 011514 171 SAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQ 250 (484)
Q Consensus 171 ~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (484)
+.|++.+++.++..+..++.+||++++++++ ...++..+..+...+||.++.
T Consensus 171 ~~f~~~~~~~~i~~~~~~~~lp~~~~~~~~~----------------------------~~~~~~~~~~~~ll~~~~~~~ 222 (413)
T PRK15403 171 VLFAIIAVMGLIAFVGLLLAMPETVKRGAVP----------------------------FSAKSVLRDFRNVFRNRLFLT 222 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCccccCCC----------------------------CChHHHHHHHHHHHcCHHHHH
Confidence 9999999887777766666688865321110 000111223444677888888
Q ss_pred HHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHH
Q 011514 251 AAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFIC 330 (484)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~ 330 (484)
..+..++.......+..+.|.++++.+|+++.+.++.......+..++. .+.+++.+|..+++.......+..++..++
T Consensus 223 ~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~-~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~ 301 (413)
T PRK15403 223 GAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVAN-AIVARFVKDPTEPRFIWRAVPIQLVGLALL 301 (413)
T ss_pred HHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHhccCCchhHHHHHHHHHHHHHHHH
Confidence 8877777777777777788999999999999999998877777777777 444555444333333322222222232222
Q ss_pred hh----ccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCC
Q 011514 331 SI----SWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPN 406 (484)
Q Consensus 331 ~~----~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~ 406 (484)
.. ..+.+. + ......+.+.+.+...|...+..-. -.+.
T Consensus 302 ~~~~~~~~~~~~------------------------~-------------~~~~~~l~~~G~~~~~p~~~~~al~-~~~~ 343 (413)
T PRK15403 302 IVGNLLWPHVWL------------------------W-------------SVLGTSLYAFGIGLIFPTLFRFTLF-SNNL 343 (413)
T ss_pred HHHHHHccccHH------------------------H-------------HHHHHHHHHHHHHHHhHHHHHHHhc-cCCC
Confidence 11 111111 0 1334456677777777777753322 2223
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 011514 407 EQGKAQGCISGISSFANIVSPLIFSPLTAL 436 (484)
Q Consensus 407 ~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~ 436 (484)
.+|++.++.+.....+...++...|++.++
T Consensus 344 ~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~ 373 (413)
T PRK15403 344 PKGTVSASLNMVILMVMAVSVEIGRWLWFN 373 (413)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 479999999999999999999999998876
No 49
>PRK10133 L-fucose transporter; Provisional
Probab=100.00 E-value=1.1e-29 Score=251.93 Aligned_cols=347 Identities=14% Similarity=0.098 Sum_probs=259.7
Q ss_pred HHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHH
Q 011514 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPL 88 (484)
Q Consensus 9 ~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~ 88 (484)
.+..+....++..+......+.+|.+.+++ +.+..+.|+..+.+.+++.+++++.|+++||+|||+++..+.
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~--------~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~ 98 (438)
T PRK10133 27 PFALLCSLFFLWAVANNLNDILLPQFQQAF--------TLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGL 98 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHH
Confidence 345556666777788888888999886665 555677899999999999999999999999999999999999
Q ss_pred HHHHHHHHHH---HhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhH
Q 011514 89 TLSIIPLAIL---AYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAAR 165 (484)
Q Consensus 89 ~~~~i~~~~~---~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~ 165 (484)
.+.+++.+++ .++++ ++.++++|+++|++. +...+..++++.|+.|+++|.+.++..+....+|..+||.++.
T Consensus 99 ~~~~~~~~l~~~~~~a~~---~~~ll~~r~l~G~g~-g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~ 174 (438)
T PRK10133 99 FLYALGAALFWPAAEIMN---YTLFLVGLFIIAAGL-GCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQ 174 (438)
T ss_pred HHHHHHHHHHHHHHhcCC---HHHHHHHHHHHHHHH-HHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999876 46778 889999999999755 7777889999999888777777899999999999999987754
Q ss_pred h------------------------------hhhHHHHHHHH-HHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccc
Q 011514 166 F------------------------------LSTTSAFQAAT-IVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEG 214 (484)
Q Consensus 166 ~------------------------------l~~~~~f~~~~-~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~ 214 (484)
. .+||.+|+... +..++..+......||.+++++++
T Consensus 175 ~l~~~~~~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~~~~~------------- 241 (438)
T PRK10133 175 SLILSNVPHQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNHSD------------- 241 (438)
T ss_pred HHHhcCCcccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccc-------------
Confidence 2 24566665433 233233222233334321110000
Q ss_pred cCCCCCCCCccCcccCCCCchHHHHHHhhccchhHHHHHHHHHHhchhhhhHHHHHHHH-hhhcCcChhhHHHHHHHHHH
Q 011514 215 VNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFL-KAQFHFNKNQFADLMLIAGL 293 (484)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~ 293 (484)
++..+..+..+.+.++|.++...+..++..........+.+.|+ ++.+|+++.+.+..+....+
T Consensus 242 ---------------~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~ 306 (438)
T PRK10133 242 ---------------AKQGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMV 306 (438)
T ss_pred ---------------ccccchhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHH
Confidence 00001111122355677777776767777777777777888885 56789999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhh
Q 011514 294 AGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSI 373 (484)
Q Consensus 294 ~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 373 (484)
+..+++ +..+++.||+++|+++..+..+..+.+.+..+.++.+.
T Consensus 307 ~~~vG~-~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~----------------------------------- 350 (438)
T PRK10133 307 CFFIGR-FTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHVG----------------------------------- 350 (438)
T ss_pred HHHHHH-HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChHH-----------------------------------
Confidence 999999 77799999999999988887776666555544433222
Q ss_pred ccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 011514 374 FMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 437 (484)
Q Consensus 374 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~ 437 (484)
.....+.+++.+..+|..++...+..|+ +.+++.++.. ....++.++|.+.|.+.|..
T Consensus 351 ----~~~~~l~glg~~~i~P~~~s~a~~~~~~-~~~~as~l~~-~~~~g~~~~~~i~G~l~~~~ 408 (438)
T PRK10133 351 ----LIALTLCSAFMSIQYPTIFSLGIKNLGQ-DTKYGSSFIV-MTIIGGGIVTPVMGFVSDAA 408 (438)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHcccch-hhccchhHHh-HHhccchHHHHHHHHHHHhc
Confidence 3445578999999999999999999874 5678888776 45578899999999999875
No 50
>PRK15011 sugar efflux transporter B; Provisional
Probab=100.00 E-value=1.5e-29 Score=248.57 Aligned_cols=373 Identities=13% Similarity=0.106 Sum_probs=253.9
Q ss_pred chhhHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHh
Q 011514 5 KEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAML 84 (484)
Q Consensus 5 ~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l 84 (484)
+-+...+.+++..++..++.++..|.+|.+.++.+ +.+..+.|++.+...+...+.+++.|.++||+||||.+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~-------~~s~~~~g~~~~~~~~~~~~~~~~~~~~~dr~g~r~~~ 84 (393)
T PRK15011 12 SFDLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEV-------HARPAMVGFFFTGSAVIGILVSQFLAGRSDKRGDRKSL 84 (393)
T ss_pred hccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHH
Confidence 33556677788899999999999999999886543 45556779988776664455555555559999999875
Q ss_pred -HHHHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccch--hHHHHHHHHHHHhHHhHHH
Q 011514 85 -TLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQR--ASAFGILLGVLSASFVCGT 161 (484)
Q Consensus 85 -~~~~~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~g~~ig~ 161 (484)
..+.+..+++..+.+++++ ++.+++.+.+.|... +...|...+++.|+.++++| +...++.+...++|.++||
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~ 160 (393)
T PRK15011 85 IVFCCLLGVLACTLFAWNRN---YFVLLFVGVFLSSFG-STANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGP 160 (393)
T ss_pred HHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHH-HhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhh
Confidence 4566666677778888888 676665555555344 45667888889998876655 3456788889999999999
Q ss_pred HhhHh----hhhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHH
Q 011514 162 LAARF----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRD 237 (484)
Q Consensus 162 ~l~~~----l~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (484)
.+++. .|||.+|+..++..++..+..++.+||++++++++. ++ .+..+
T Consensus 161 ~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~-----------~~~~~- 212 (393)
T PRK15011 161 PLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPSMRKELPLAT----------------GT-----------LEAPR- 212 (393)
T ss_pred HHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhcCccCCCCcccc----------------cc-----------ccccc-
Confidence 98875 499999999988887777777777888653322110 00 00000
Q ss_pred HHHHhhccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHH
Q 011514 238 LICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLS 317 (484)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~ 317 (484)
.+++..+......+........+..+.|.|+++.+|+++.+.+.+.+......+++. ++.++++||+++|+.+.
T Consensus 213 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~-~~~G~l~dr~g~~~~~~ 286 (393)
T PRK15011 213 -----RNRRDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTM-LIAGYFAKRLGKRFLMR 286 (393)
T ss_pred -----cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhChHHHHH
Confidence 011222223333333334445566789999988889999998988877777676666 77799999999999877
Q ss_pred HhHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHH
Q 011514 318 LGLFAACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRS 397 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 397 (484)
.+.....+.+......++.+. ......+.+++.+...+....
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~--------------------------------------~l~~~~l~~~~~g~~~~~~~~ 328 (393)
T PRK15011 287 VAAVAGVCFYAGMLMAHSPAI--------------------------------------LLGLQLLNAIYIGILGGIGML 328 (393)
T ss_pred HHHHHHHHHHHHHHHHhhHHH--------------------------------------HHHHHHHHHHHHHHHHHHHHH
Confidence 666555444433333333222 022222333344444445556
Q ss_pred HHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHHHHHHhc
Q 011514 398 IVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMS 469 (484)
Q Consensus 398 ~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (484)
..+|..| +++|++.++.+...++|..++|.+.|.+.|.. +++. .+.+.+++.+++.+..+..+
T Consensus 329 ~~~~~~p-~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~-g~~~-------~~~~~~~~~~~~~~~~~~~~ 391 (393)
T PRK15011 329 YFQDLMP-GQAGSATTLYTNTSRVGWIIAGSLAGIVAEIW-NYHA-------VFWFALVMIIATLFCLLRIK 391 (393)
T ss_pred HHHHhCC-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHH-------HHHHHHHHHHHHHHHHHhhc
Confidence 6778887 56999999999999999999999999999975 5444 44555666666666555554
No 51
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=100.00 E-value=5e-30 Score=257.35 Aligned_cols=377 Identities=13% Similarity=0.076 Sum_probs=249.4
Q ss_pred hHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHH
Q 011514 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLP 87 (484)
Q Consensus 8 ~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~ 87 (484)
+.+...+...++..++.....|.+|.+.+++ +.+..+.|++.+.+.+++.+++++.|+++||+|||+++..+
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--------gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~ 107 (476)
T PLN00028 36 RAFHLSWISFFTCFVSTFAAAPLLPIIRDNL--------NLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFL 107 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHH
Confidence 3444445556666666667778888887766 45556778889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhH--
Q 011514 88 LTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAAR-- 165 (484)
Q Consensus 88 ~~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~-- 165 (484)
.++.+++.++++++++ ++.+++.|++.|++. +... ....+++|++|+++|++++++.....++|..+++.+..
T Consensus 108 ~~~~~~~~~~~~~~~s---~~~l~~~r~l~G~~~-~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i 182 (476)
T PLN00028 108 LMLTAPAVFCMSLVSS---ATGFIAVRFFIGFSL-ATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLV 182 (476)
T ss_pred HHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHH-HhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998 788889999999765 4443 45678999999999999999998777666666543332
Q ss_pred -----------hhhhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCc
Q 011514 166 -----------FLSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPS 234 (484)
Q Consensus 166 -----------~l~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (484)
..+||+.|++.+++.++..+..+++.++.|+.+.++ . + +++ +.++.+
T Consensus 183 ~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~~~~~~----------~-~--~~~---------~~~~~~ 240 (476)
T PLN00028 183 FPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLGQDLPDGNYRE----------L-K--KSG---------TMPKDS 240 (476)
T ss_pred HHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHcCcCCCCchhh----------H-H--hcC---------cccccc
Confidence 137999999999888777666655443333211000 0 0 000 000011
Q ss_pred hHHHHHHhhccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchH
Q 011514 235 IRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAK 314 (484)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ 314 (484)
..+.++...++++.+...+..++.........++.|.|+.+.+|++..+.+.+.+..+++..++. ++.|+++||+++|+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~-~~~G~lsDr~~~r~ 319 (476)
T PLN00028 241 FSKVLRYGVTNYRTWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFAR-PAGGYLSDVAARRF 319 (476)
T ss_pred HHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHHhc
Confidence 22233335566777766666555555555667788999988889999999999999999999998 77799999997651
Q ss_pred -------HHHHhHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHh
Q 011514 315 -------LLSLGLFAACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVL 387 (484)
Q Consensus 315 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 387 (484)
.......+.++..+.+....+.+. ......+.+++
T Consensus 320 ~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~--------------------------------------~~~~~~l~~~~ 361 (476)
T PLN00028 320 GMRGRLWALWIVQTLGGVFCIWLGRANSLGA--------------------------------------AIVVMILFSIF 361 (476)
T ss_pred CcchhHHHHHHHHHHHHHHHHHhcccchHHH--------------------------------------HHHHHHHHHHH
Confidence 222333333333333333333222 12223344444
Q ss_pred hhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHHHHHH
Q 011514 388 VVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLM 467 (484)
Q Consensus 388 ~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (484)
.+...+...++..+.. ++++|++.|+.+....+|.+++|.+.+ .+..+++.. .|.+.+++.+++.+..+.
T Consensus 362 ~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~g~lg~~i~~~l~~--~~~~~~y~~-------~f~~~~~~~~i~~~~~~~ 431 (476)
T PLN00028 362 VQAACGATFGIVPFVS-RRSLGVISGLTGAGGNVGAVLTQLLFF--TGSSYSTET-------GISLMGVMIIACTLPVAF 431 (476)
T ss_pred HHHhhhhhcccCcccC-hhhchhhhhhhhccccHHHHHHHHHHH--hcCCccHhh-------HHHHHHHHHHHHHHHHHh
Confidence 4444444555555554 478999999987777666666665543 111112222 456666666666555554
Q ss_pred h
Q 011514 468 M 468 (484)
Q Consensus 468 ~ 468 (484)
.
T Consensus 432 ~ 432 (476)
T PLN00028 432 I 432 (476)
T ss_pred e
Confidence 4
No 52
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.8e-30 Score=240.64 Aligned_cols=380 Identities=14% Similarity=0.098 Sum_probs=297.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhH
Q 011514 6 EIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLT 85 (484)
Q Consensus 6 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~ 85 (484)
.+|++++-.....+......+..|+.+.+.. +.++|..+.+++.++..+...+..++.|.+.||+|.|+...
T Consensus 12 ~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~--------~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~ 83 (417)
T COG2223 12 ARRNLWLSTLAFDVGFMVWTLFSPLGVFIKS--------DFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTI 83 (417)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhcc--------ccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHH
Confidence 4566666666666666666666666666643 44788888999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhH----HhHHH
Q 011514 86 LPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSAS----FVCGT 161 (484)
Q Consensus 86 ~~~~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g----~~ig~ 161 (484)
.+.++..+..+..+++.+++.++.+++.+++.|+++ +.+ ....+++++++|+|++|.++|+.. ..|+| ..++|
T Consensus 84 ~s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~G-asF-av~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P 160 (417)
T COG2223 84 LSMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLGLAG-ASF-AVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAP 160 (417)
T ss_pred HHHHHHHHHHHHHHHHccCCchHHHHHHHHHHhccc-cee-hcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHH
Confidence 999999999999999988665679999999999754 444 689999999999999999999998 66666 55677
Q ss_pred HhhHhhh---hHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchH-H
Q 011514 162 LAARFLS---TTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIR-D 237 (484)
Q Consensus 162 ~l~~~l~---~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 237 (484)
.+....+ |+....+..+..++..+..++...|.|+.++.. ++.+ .
T Consensus 161 ~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~-------------------------------~~~~~~ 209 (417)
T COG2223 161 LVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASV-------------------------------KPQLPA 209 (417)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccc-------------------------------cccchh
Confidence 7777777 999988888888888888888888877653322 0111 4
Q ss_pred HHHHhhccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHH
Q 011514 238 LICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLS 317 (484)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~ 317 (484)
.++...++|+.|.+.+.++....++.++..++|.|+++.+|.++.++|.......+.+.+.+ .++|+++||+|.+|...
T Consensus 210 ~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~R-p~GG~LsDR~Gg~rv~~ 288 (417)
T COG2223 210 QLKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALAR-PLGGWLSDRIGGRRVTL 288 (417)
T ss_pred HHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHH-hccchhhhhccchhHHH
Confidence 45557889999999999999999999999999999999999999999999999999999999 77899999999999998
Q ss_pred HhHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHH
Q 011514 318 LGLFAACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRS 397 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 397 (484)
.....++++........+.... +...++ ........++..+..+...+.
T Consensus 289 ~~f~~~~~~~~~l~~~~~~~~~------------------~~~~~~-------------~~~~~l~l~~~~G~GnGsvfk 337 (417)
T COG2223 289 AVFVGMALAAALLSLFLTGFGH------------------GGSFVV-------------FVAVFLALFVFAGLGNGSVFK 337 (417)
T ss_pred HHHHHHHHHHHHHHcccccccc------------------CcchHH-------------HHHHHHHHHHHhccCcchhee
Confidence 8888888887777665421110 000000 022233444555555556666
Q ss_pred HHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHHHHHH
Q 011514 398 IVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLM 467 (484)
Q Consensus 398 ~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (484)
++....| ++.|.+.|+....+.+|++.-|...|..++.++++.. .|.+...+.+++....+.
T Consensus 338 ~Ip~if~-~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~-------~f~~~~~~~~~a~v~~~~ 399 (417)
T COG2223 338 MIPVIFP-KETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTG-------AFMLLLAFYLVALVLTWA 399 (417)
T ss_pred echHHHH-hhhhHHHHHHHHhccccccchhHHHHHHHHhcccHHH-------HHHHHHHHHHHHHHHHHH
Confidence 6666666 5889999999999999999999999999999854443 455555566665555443
No 53
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=100.00 E-value=7.9e-30 Score=254.05 Aligned_cols=365 Identities=13% Similarity=0.083 Sum_probs=246.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHHHHHHHHHHHhccch-hhHHHHHHHHHHhhhhccchh
Q 011514 47 SLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSI-SFFYAYYALRTLTAMVCEGSI 125 (484)
Q Consensus 47 ~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~i~~~~~~~~~~~-~~~~~l~~~r~l~G~~~~g~~ 125 (484)
+.+..+.|++.+++.++..++.++.|+++||+|||+.+..+.++.+++.++.++.++. ..++.+.+.|++.|++. +..
T Consensus 57 g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~-g~~ 135 (438)
T TIGR00712 57 GFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQ-GMG 135 (438)
T ss_pred CCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHh-hcc
Confidence 4555677999999999999999999999999999999999999999998887765321 12667788999999755 656
Q ss_pred hHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHh-----hhhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCC
Q 011514 126 NCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF-----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDD 200 (484)
Q Consensus 126 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~-----l~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~ 200 (484)
.+.....+.|++|+++|++++++.+...++|..++|.+.+. .+||..|++.+++.++..+..++.+||++++.+.
T Consensus 136 ~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~ 215 (438)
T TIGR00712 136 WPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMRDTPQSCGL 215 (438)
T ss_pred hHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCC
Confidence 67788999999999999999999999999998888765432 4899999999988888777777778887654321
Q ss_pred CCCCCCcccccccccCCCCCCCCccCcccCCCCchHHH-HHHhhccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCc
Q 011514 201 DDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDL-ICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHF 279 (484)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 279 (484)
++.++. +.+.. ++..+ +.+++ .+.++. .+...+++.++...+..++.........++.|.|+++..|+
T Consensus 216 ~~~~~~-------~~~~~-~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~ 284 (438)
T TIGR00712 216 PPIEEY-------RNDYP-DDYNE--KAEQE-LTAKEIFMQYVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHF 284 (438)
T ss_pred CCchhc-------ccccc-ccccc--ccccc-cchHHHHHHHHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCC
Confidence 110000 00000 00000 00001 112222 22356778888887777777767777888999999998899
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHH---HHHHHHhhcc--chhhHHHhhhhHHHHHHHHh
Q 011514 280 NKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAAC---INMFICSISW--SAWVIKIFFNKVFKLLLLSF 354 (484)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~---~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~f 354 (484)
++.+.+.......+...++. ++.+++.||+++++....+..... ++...+...+ +.+.
T Consensus 285 s~~~~~~~~~~~~~~~~ig~-~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------- 347 (438)
T TIGR00712 285 ALDKSSWAYFLYEYAGIPGT-LLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLV---------------- 347 (438)
T ss_pred ChhhHHHHHHHHHHHHHHHH-HHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHH----------------
Confidence 99999999888888888888 777999999964332222222211 1112111111 1111
Q ss_pred hhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHHHH-HHHHHHHHHH
Q 011514 355 ITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFAN-IVSPLIFSPL 433 (484)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~-~~gp~i~g~l 433 (484)
........+.+.............|..|+++||++.|+.+...++++ .++|.+.|.+
T Consensus 348 ----------------------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l 405 (438)
T TIGR00712 348 ----------------------DMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYT 405 (438)
T ss_pred ----------------------HHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHH
Confidence 01112223332222222223456789999999999999999988874 6899999999
Q ss_pred HHhhhcCCCCcccCchHHHHHHHHHHHHHHHHHHhcc
Q 011514 434 TALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSH 470 (484)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (484)
.|+. +++. .+.+..+..+++.+......+
T Consensus 406 ~~~~-g~~~-------~~~~~~~~~~~~~~~~~~~~~ 434 (438)
T TIGR00712 406 VDFF-GWDG-------GFMVMIGGSILAVILLIVVMI 434 (438)
T ss_pred HHhc-cchH-------HHHHHHHHHHHHHHHHHHHHh
Confidence 9986 5444 344444444444444444333
No 54
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=100.00 E-value=1.8e-29 Score=247.00 Aligned_cols=364 Identities=12% Similarity=-0.008 Sum_probs=272.9
Q ss_pred HHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHH-
Q 011514 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPL- 88 (484)
Q Consensus 10 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~- 88 (484)
...+.+..+....+.++..|.+|.+.+|. +.+..+.|++.+++.+...++++++|+++||+|||+......
T Consensus 6 ~~~l~~~~~~~~~~~~~~~p~l~~~l~~~--------g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~ 77 (382)
T TIGR00902 6 FRWLALGFFGYFCAYGIFLPFFPAWLKGI--------GLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLA 77 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHc--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 34567778888888999999999999876 556678899999999999999999999999999854332211
Q ss_pred HHHHHHH-HHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHh-
Q 011514 89 TLSIIPL-AILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF- 166 (484)
Q Consensus 89 ~~~~i~~-~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~- 166 (484)
....+.. ..+..+++ ++.+++.|.++|.+. +...|...++..|+ +++|+++.+......++|.++||.+++.
T Consensus 78 ~~~~l~~~~~~~~~~~---~~~l~~~~~l~~~~~-~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l 151 (382)
T TIGR00902 78 LASAIFAAAFSAGAHN---AWLLFIAIGLFALFF-SAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGL 151 (382)
T ss_pred HHHHHHHHHHHHhhhh---HHHHHHHHHHHHHHH-ccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHH
Confidence 1111122 23446677 888899999999765 44567888887665 4788999999999999999999988876
Q ss_pred ---hhhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHHHHHHhh
Q 011514 167 ---LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLR 243 (484)
Q Consensus 167 ---l~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (484)
.|||..|++.... .+..+.. +.++|+++++++++ + +..++.++ .+...
T Consensus 152 ~~~~g~~~~f~~~~~~-~~~~~~~-~~~~~~~~~~~~~~-----------------~------~~~~~~~~----~~~~l 202 (382)
T TIGR00902 152 IGMFDEQNILAILTAG-LAFMLIG-FLIKPTIPPKDAIP-----------------E------DESQGDSA----FIALL 202 (382)
T ss_pred HHHcChhHHHHHHHHH-HHHHHHH-HHcCCCCCCCcccc-----------------c------cccccchh----HHHHH
Confidence 4899998887644 2222222 33444321111110 0 00001112 22366
Q ss_pred ccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHH
Q 011514 244 SSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAA 323 (484)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~ 323 (484)
|+|+++...+..++.......+.++.|.|+++ .|.++.+.|.+.....+..++.. ...+++.||+|+|+.+.++....
T Consensus 203 ~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~-~~~~~l~~r~g~~~~l~~~~~~~ 280 (382)
T TIGR00902 203 KNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIF-AFSNKLFQNCSARDLLLISAIAC 280 (382)
T ss_pred cChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHH-HHhHHHHhhCCHHHHHHHHHHHH
Confidence 77889888888888888888899999999987 69999999999888777777776 77799999999999999999999
Q ss_pred HHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhccc
Q 011514 324 CINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQV 403 (484)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 403 (484)
.+....+.+.++.+. +.....+.++..+...+....++++.
T Consensus 281 ~~~~~~~~~~~~~~~--------------------------------------~~~~q~l~g~~~~~~~~~~~~~i~~~- 321 (382)
T TIGR00902 281 VGRWAIIGAIEAFPL--------------------------------------IFLLQILHCGTFAVCHLAAMRYIAAQ- 321 (382)
T ss_pred HHHHHHHHhHhhHHH--------------------------------------HHHHHHHHHHHHHHHHHHHHHHHHhC-
Confidence 999888887776665 24456688888899999999999988
Q ss_pred CCCchhHHHHHHH-HHHHHHHHHHHHHHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHHHHH
Q 011514 404 GPNEQGKAQGCIS-GISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSL 466 (484)
Q Consensus 404 p~~~~g~~~g~~~-~~~~lg~~~gp~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (484)
|++++++.+++++ ....+|..++|.++|.++|+. +. . .|...+++.+++.+...
T Consensus 322 ~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~-g~-~-------~~~~~~~~~~~~~~~~~ 376 (382)
T TIGR00902 322 PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTL-GA-G-------TFVFMAIIAAAAFFLIP 376 (382)
T ss_pred CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cH-H-------HHHHHHHHHHHHHHHHH
Confidence 9999999999987 457799999999999999986 43 2 45666666665554433
No 55
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.98 E-value=9e-30 Score=254.23 Aligned_cols=359 Identities=10% Similarity=0.056 Sum_probs=251.7
Q ss_pred hHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHHHHHHHHHHHhccchhh
Q 011514 27 VVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISF 106 (484)
Q Consensus 27 ~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~i~~~~~~~~~~~~~ 106 (484)
....+|.+.+++ +.+..+.+++.+.+.++..++.++.|+++||+|||++++.+.++.+++.++++++++
T Consensus 38 ~~~~~~~i~~~~--------g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~--- 106 (455)
T TIGR00892 38 VTVFFKELQQIF--------QATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSN--- 106 (455)
T ss_pred hhhhHHHHHHHh--------CcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhh---
Confidence 344566666555 455566789999999999999999999999999999999999999999999999988
Q ss_pred HHHHHH-HHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHh----hhhHHHHHHHHHHHH
Q 011514 107 FYAYYA-LRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF----LSTTSAFQAATIVSM 181 (484)
Q Consensus 107 ~~~l~~-~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~----l~~~~~f~~~~~~~~ 181 (484)
++.+++ .|++.|++. +...+...+++.|+++ ++|+++.++.+.+..+|..++|.+++. .+||++|++.+++.+
T Consensus 107 ~~~l~~~~~~l~G~~~-~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~ 184 (455)
T TIGR00892 107 VIELYLTAGFITGLGL-AFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLL 184 (455)
T ss_pred HHHHHHHHHHHHHhcc-hhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHH
Confidence 666654 578999755 5444566788889885 799999999999999999999887765 489999999998777
Q ss_pred HHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHHH--HHHhhccchhHHHHHHHHHHh
Q 011514 182 LAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDL--ICLLRSSVTLSQAAVVAFFSG 259 (484)
Q Consensus 182 i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 259 (484)
+..+..++..|+.+.++..+.+.+ +....+...+ +. ..++..+..++. ++ ..++|.++......++..
T Consensus 185 ~~~v~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~ 254 (455)
T TIGR00892 185 HCCVCGALMRPVGPSQRVSKSKSK-----EGLPPDGSTK--KL--SKKSTAEKINRFLDFS-LFTHRGFLVYLSGNVIMF 254 (455)
T ss_pred HHHHHHHHhCCCCccccccccccc-----ccCCCCCccc--cc--cccchhhhhhhhcchH-HhcCchHHHHHHHHHHHH
Confidence 665554444443221111000000 0000000000 00 000000011111 12 456788887777777777
Q ss_pred chhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhh--cchHHHHH--hHHHHHHHHHHHhhccc
Q 011514 260 LSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPIL--GEAKLLSL--GLFAACINMFICSISWS 335 (484)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--g~~~~~~~--~~~~~~~~~~~~~~~~~ 335 (484)
........++|.|.++ .|++..+.+.+.+..+++..+++ +..+++.||. ++++.... +....+++.+.....++
T Consensus 255 ~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~-~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~ 332 (455)
T TIGR00892 255 LGFFAPIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDIFAR-PSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGD 332 (455)
T ss_pred HHccchHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhch
Confidence 7777778889999887 59999999999999999998888 6668999873 33433332 23333333334434444
Q ss_pred hhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHH
Q 011514 336 AWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCI 415 (484)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~ 415 (484)
.+. +.....+.|++.+...+...+.+.+.+|++++|++.|+.
T Consensus 333 ~~~--------------------------------------~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~ 374 (455)
T TIGR00892 333 YTG--------------------------------------LVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLV 374 (455)
T ss_pred HHH--------------------------------------HHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHH
Confidence 333 134455778888888888899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCc
Q 011514 416 SGISSFANIVSPLIFSPLTALFLSKGAPFNFPG 448 (484)
Q Consensus 416 ~~~~~lg~~~gp~i~g~l~~~~~~~~~~~~~~~ 448 (484)
+...++|+.+||.++|.+.+..+++...+...+
T Consensus 375 ~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~ 407 (455)
T TIGR00892 375 TIVECCAVLIGPPLAGRLVDATKNYKYIFYASG 407 (455)
T ss_pred HHHHHHHHHccccceeeeehhcCCcchHHHHhh
Confidence 999999999999999999998645655443333
No 56
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.98 E-value=4.4e-29 Score=241.43 Aligned_cols=341 Identities=22% Similarity=0.319 Sum_probs=288.5
Q ss_pred HHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHHH
Q 011514 12 HLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLS 91 (484)
Q Consensus 12 ~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~ 91 (484)
.+....+...++.....+..|.+.++. +.+..+.+++.+...++..++.++.|+++||+|||+.+..+..+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~ 74 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLAEDL--------GLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLF 74 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHHHHc--------CCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHH
Confidence 455677788888899999999998776 444557799999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHhh----
Q 011514 92 IIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL---- 167 (484)
Q Consensus 92 ~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l---- 167 (484)
.++.+...+.++ ++.+++.|++.|++. +...+...+++.|+.|+|+|++.+++.+...++|..+||.+++.+
T Consensus 75 ~~~~~~~~~~~~---~~~~~~~~~l~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 150 (352)
T cd06174 75 ALGSLLLAFASS---LWLLLVGRFLLGLGG-GALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESL 150 (352)
T ss_pred HHHHHHHHHhcc---HHHHHHHHHHHHccc-ccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999988 889999999999755 677789999999999999999999999999999999999888764
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHHHHHHhhccch
Q 011514 168 STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVT 247 (484)
Q Consensus 168 ~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (484)
+||+.+++.+.+.++..+...+ .+ |.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~-~~-----------------------------------------------------~~ 176 (352)
T cd06174 151 GWRWLFLILAILGLLLALLLLF-LL-----------------------------------------------------RL 176 (352)
T ss_pred hHHHHHHHHHHHHHHHHHHHHH-HH-----------------------------------------------------HH
Confidence 6999999988777766655544 22 33
Q ss_pred hHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchH-HHHHhHHHHHHH
Q 011514 248 LSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAK-LLSLGLFAACIN 326 (484)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~-~~~~~~~~~~~~ 326 (484)
++...+..++..........+.|.+.++.+|.++.+.+.......++..++. .+.+++.||+++|+ .+..+..+..++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~ 255 (352)
T cd06174 177 LLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGA-LLGGLLSDRLGRRRLLLLIGLLLAALG 255 (352)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 5556667777777888888899999999889999999999999999999998 77799999999999 888898888888
Q ss_pred HHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCC
Q 011514 327 MFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPN 406 (484)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~ 406 (484)
.......++.+. ......+.+++.+...+...++..|..|++
T Consensus 256 ~~~~~~~~~~~~--------------------------------------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 297 (352)
T cd06174 256 LLLLALAPSLAL--------------------------------------LLVALLLLGFGLGFAFPALLTLASELAPPE 297 (352)
T ss_pred HHHHHHhccHHH--------------------------------------HHHHHHHHHHHHhccchhHHHHHHhhcCHH
Confidence 888877665444 245566788888999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHHHH
Q 011514 407 EQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQS 465 (484)
Q Consensus 407 ~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (484)
+|++.+|+.+...+++..++|.+.|.+.+.. +++. .+.+.+++.+++.+..
T Consensus 298 ~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~-~~~~-------~~~~~~~~~~i~~i~~ 348 (352)
T cd06174 298 ARGTASGLFNTFGSLGGALGPLLAGLLLDTG-GYGG-------VFLILAALALLAALLL 348 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-Ccch-------HHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999864 5544 4466666665555444
No 57
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.98 E-value=2.7e-29 Score=254.86 Aligned_cols=370 Identities=14% Similarity=0.180 Sum_probs=255.9
Q ss_pred hhHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHH
Q 011514 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (484)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~ 86 (484)
++.+..+++..+++.++.....+.+|.+.+++ +.+..+.+++.+.+.++..++.++.|+++||+|||+.+..
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--------~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~ 90 (496)
T PRK03893 19 WKAFSAAWLGYLLDGFDFVLITLVLTEVQGEF--------GLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVI 90 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHH
Confidence 34566778888888999999999999888776 4555677999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHh
Q 011514 87 PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF 166 (484)
Q Consensus 87 ~~~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~ 166 (484)
+.++.+++.++++++++ ++.+++.|++.|++. +...+...+++.|.+|+++|+++++......++|..++|.+++.
T Consensus 91 ~~~~~~~~~~~~~~~~~---~~~l~~~~~l~G~~~-~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 166 (496)
T PRK03893 91 SIVLFSVGTLACGFAPG---YWTLFIARLVIGMGM-AGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSL 166 (496)
T ss_pred HHHHHHHHHHHHHHHhH---HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988 888999999999755 56667889999999999999999999999999999999988876
Q ss_pred ----hhhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHH-----
Q 011514 167 ----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRD----- 237 (484)
Q Consensus 167 ----l~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 237 (484)
.+||+.|++..+ ..+..+.....+||+++.++++++.++. ++ ..+...+.......
T Consensus 167 l~~~~~w~~~f~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~-----------~~---~~~~~~~~~~~~~~~~~~~ 231 (496)
T PRK03893 167 VVPVWGWRALFFIGIL-PIIFALWLRKNLPEAEDWKEKHAGKAPV-----------RT---MVDILYRGEHRIINILLTL 231 (496)
T ss_pred HhccCCHHHHHHHHHH-HHHHHHHHHHhCCCchhhhhhccccccc-----------hh---HHHHHhcchhHHHHHHHHH
Confidence 489999987543 3333333344456654322111000000 00 00000000000000
Q ss_pred --------HHH-------------------------Hhh--ccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChh
Q 011514 238 --------LIC-------------------------LLR--SSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKN 282 (484)
Q Consensus 238 --------~~~-------------------------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 282 (484)
... ... +.+.........+...........++|.|+++.+|++..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~ 311 (496)
T PRK03893 232 AAAAALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPH 311 (496)
T ss_pred HHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHH
Confidence 000 000 000011111111111111223567899999877899999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhH
Q 011514 283 QFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISV 362 (484)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~ 362 (484)
+.+.+.+...++..++. ++.+++.||+++|+.+..+..+..+..+..........
T Consensus 312 ~~g~~~~~~~~~~~~g~-~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------ 366 (496)
T PRK03893 312 TVANVLFFSGFGAAVGC-CVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANV------------------------ 366 (496)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHH------------------------
Confidence 99999999999999988 77799999999999887776665555443333222111
Q ss_pred HHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 011514 363 HVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKG 441 (484)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~ 441 (484)
+. ......+.+.......+...+++++.+|+++||+++|+.+....+|..+||.+.|.+.|.. ++.
T Consensus 367 ~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~-g~~ 432 (496)
T PRK03893 367 WV------------LGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRL-DLG 432 (496)
T ss_pred HH------------HHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccC-ChH
Confidence 00 0111112222222334556678889999999999999999999999999999999999876 444
No 58
>TIGR00898 2A0119 cation transport protein.
Probab=99.98 E-value=3.8e-30 Score=261.60 Aligned_cols=366 Identities=18% Similarity=0.146 Sum_probs=254.3
Q ss_pred CchhH---HHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhc
Q 011514 45 ECSLA---IYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVC 121 (484)
Q Consensus 45 ~~~~~---~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 121 (484)
|++++ ..+.|+..+++.++.++++++.|+++||+|||+++..+.++.+++.++.+++++ ++.+++.|++.|++.
T Consensus 118 e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~---~~~~~~~r~l~G~~~ 194 (505)
T TIGR00898 118 EWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPN---YTVFLVFRLLVGMGI 194 (505)
T ss_pred EecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHccc---HHHHHHHHHHHHhhc
Confidence 34555 678899999999999999999999999999999999999999999999999999 899999999999765
Q ss_pred cchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHhh-hhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCC
Q 011514 122 EGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL-STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDD 200 (484)
Q Consensus 122 ~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l-~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~ 200 (484)
+...+...+++.|++|+++|+++.++.+....+|.+++|.++..+ +||+.|++.++..++..+.. +++||+|++...
T Consensus 195 -~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~wr~~~~~~~i~~~~~~~~~-~~~~esp~~l~~ 272 (505)
T TIGR00898 195 -GGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPDWRWLQLAVSLPTFLFFLLS-WFVPESPRWLIS 272 (505)
T ss_pred -cchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH-HhcCCChHHHHH
Confidence 666688999999999999999999999999999999999988764 79999999987776665554 679999875433
Q ss_pred CCCCCCccccccc-----ccCCCCCC-CC--ccC-cccCCCCchHHHHHHhhccchhHHHHHHHHHHhchhhhhHHHHHH
Q 011514 201 DDLTRPIITEETE-----GVNQNESN-SP--VKI-PVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLY 271 (484)
Q Consensus 201 ~~~~~~~~~~~~~-----~~~~~~~~-~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (484)
+++.++.....++ +....++. .. .++ ...++..+. +.++++|.++...+...+.++.........+.
T Consensus 273 ~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (505)
T TIGR00898 273 QGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSF----LDLFRTPNLRKTTLCLMMLWFTTAFSYYGLVL 348 (505)
T ss_pred CCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcH----HHHhCChHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3222221111000 00000000 00 000 000111123 33566677766665555444443333333333
Q ss_pred HHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhhccch--hhHHHhhhhHHHH
Q 011514 272 FLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSA--WVIKIFFNKVFKL 349 (484)
Q Consensus 272 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 349 (484)
+..+ ++.+... .....++..+++. ++.+++.||+|||+.+..+..+.+++++.+.+.++. +.
T Consensus 349 ~~~~-~~~~~~~---~~~~~~~~~i~~~-~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~----------- 412 (505)
T TIGR00898 349 DLGN-LGGNIYL---DLFISGLVELPAK-LITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFL----------- 412 (505)
T ss_pred cccc-cCCChHH---HHHHHHHHHHHHH-HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHH-----------
Confidence 3333 3544332 2334455566666 667999999999999999888888887777665543 22
Q ss_pred HHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHH
Q 011514 350 LLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLI 429 (484)
Q Consensus 350 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i 429 (484)
......+.+++.+...+..+.+..|.+|++.|+++.|+.+....+|++++|.+
T Consensus 413 ---------------------------~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i 465 (505)
T TIGR00898 413 ---------------------------RTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFL 465 (505)
T ss_pred ---------------------------HHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHH
Confidence 12233345556666778888999999999999999999999999999999999
Q ss_pred HHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHHHHHHhccCC
Q 011514 430 FSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSHTP 472 (484)
Q Consensus 430 ~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (484)
.+ +.+. +... .+.+.+++.+++.+...++++++
T Consensus 466 ~~-~~~~--~~~~-------~~~~~~~~~~~~~~~~~~lpet~ 498 (505)
T TIGR00898 466 VY-LGEK--WLFL-------PLVLFGGLALLAGILTLFLPETK 498 (505)
T ss_pred HH-HHHH--HHhh-------HHHHHHHHHHHHHHHHHcCcCCC
Confidence 98 4433 2222 34555555555555555555443
No 59
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.98 E-value=1.4e-28 Score=241.76 Aligned_cols=348 Identities=15% Similarity=0.113 Sum_probs=264.1
Q ss_pred HHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHH
Q 011514 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPL 88 (484)
Q Consensus 9 ~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~ 88 (484)
.+..++...++.++..++..|.+|.+.+++ +.+..+.|++.+.+.+++.+++++.|++.||+|||+.+..+.
T Consensus 4 ~~~~~~~~f~~~G~~~~~~~~l~~~~~~~~--------~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~ 75 (410)
T TIGR00885 4 PFALITSLFALWGFANDITNPMVPQFQQAF--------TLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGL 75 (410)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHh--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHH
Confidence 456677778888888899999999997766 556677899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHhh-
Q 011514 89 TLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL- 167 (484)
Q Consensus 89 ~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l- 167 (484)
++.+++.+++..+...+.++.+++.|++.|++. +...+...+++.+..|+++|++..++.+...++|..+||.++..+
T Consensus 76 ~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~ 154 (410)
T TIGR00885 76 FLYALGAFLFWPAAEIMNYTLFLVGLFILTAGL-GFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLI 154 (410)
T ss_pred HHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhH-HHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999988655421112788999999999755 777788999999999999999999999999999999999876543
Q ss_pred -----------------------------hhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCC
Q 011514 168 -----------------------------STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQN 218 (484)
Q Consensus 168 -----------------------------~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (484)
+||++|++.+.+.++..+... +.++++.+++++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~-~~~~p~~~~~~~----------------- 216 (410)
T TIGR00885 155 LSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIM-LTKMPALNHSDA----------------- 216 (410)
T ss_pred hcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCCCCcccc-----------------
Confidence 499999988876665544432 233221111000
Q ss_pred CCCCCccCcccCCCCchHHHHHHhhccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhc-CcChhhHHHHHHHHHHHHHH
Q 011514 219 ESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQF-HFNKNQFADLMLIAGLAGTI 297 (484)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~ 297 (484)
+ + .+.++..+...++|.++...+..+++...+....++++.|.++.. +.+....+...+.......+
T Consensus 217 --------~--~--~~~~~~~~~~~~~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~v 284 (410)
T TIGR00885 217 --------K--Q--ISFSASLSRLARIRHYREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFI 284 (410)
T ss_pred --------c--c--ccchhhHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHH
Confidence 0 0 011111223566788887788888888787778888999987642 33444444455555566778
Q ss_pred HHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccch
Q 011514 298 SQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQV 377 (484)
Q Consensus 298 ~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 377 (484)
++ ++++++.||+++|+.+.++..+..+.+++..+.++...
T Consensus 285 GR-~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~~~~~--------------------------------------- 324 (410)
T TIGR00885 285 SR-FIGTWLISYLAAHKVLMAYAIIGMALCLGSIFAGGHVG--------------------------------------- 324 (410)
T ss_pred HH-HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChHH---------------------------------------
Confidence 88 88899999999999988888888887777776655444
Q ss_pred hhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 011514 378 PYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 437 (484)
Q Consensus 378 ~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~ 437 (484)
.+...+.+++.+..+|...+...+..+++.+....++.... +|+.+.|++.|.+.|..
T Consensus 325 ~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~~--~Gga~~p~l~G~~~d~~ 382 (410)
T TIGR00885 325 LYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMAI--IGGGIVPPLQGFIIDMK 382 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHH--hccchHHHHHHHHHHHh
Confidence 45556778888888999999999999976654455555544 99999999999999964
No 60
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.98 E-value=3.9e-30 Score=258.60 Aligned_cols=363 Identities=12% Similarity=0.058 Sum_probs=251.8
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHHHHHHHHHHHhc--cchhhHHHHHHHHHHhhhhcc
Q 011514 45 ECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYR--RSISFFYAYYALRTLTAMVCE 122 (484)
Q Consensus 45 ~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~i~~~~~~~~--~~~~~~~~l~~~r~l~G~~~~ 122 (484)
|.+.+..+.|++.+.+.+++.+++++.|+++||+|||+++..+.++.+++.+++.++ .+ ++.+++.|+++|++.
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~---~~~l~~~r~~~G~~~- 145 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGG---IALVVFCRVIQGLAQ- 145 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcC---chHHHHHHHHHHHhc-
Confidence 567888899999999999999999999999999999999999999999988887554 45 677899999999755
Q ss_pred chhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHhh-----hhHHHHHHHHHHHHHHHHHHHHHcccCCCC
Q 011514 123 GSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL-----STTSAFQAATIVSMLAAAYMRVFLKDDVPN 197 (484)
Q Consensus 123 g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l-----~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~ 197 (484)
+...|....+++|++|+++|++++++...+..+|..++|.+++.+ +||.+|++.+++.++..+..+...||+|+.
T Consensus 146 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~ 225 (465)
T TIGR00894 146 GSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSI 225 (465)
T ss_pred ccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCccc
Confidence 777789999999999999999999999999999999999887652 899999999888777766666666666543
Q ss_pred CCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHHHHHHhhccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhc
Q 011514 198 DDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQF 277 (484)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (484)
+++.++++ .+..++..+++ .+..+...++++ ..+++.++...+..++.......+.+++|.|+++.+
T Consensus 226 ~~~~~~~~------~~~i~~~~~~~---~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~ 292 (465)
T TIGR00894 226 HPCISKFE------KKYINSSLQGQ---KGSTRQSLPIKA----IPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVL 292 (465)
T ss_pred CCCCCHHH------HHHHHhhcccc---cCCCCCCCCHHH----HhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 32211100 00000000000 000111123333 667788999998888888888888999999999999
Q ss_pred CcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHH--------HHHhHHHH--HHHHHHHhhcc-chhhHHHhhhhH
Q 011514 278 HFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKL--------LSLGLFAA--CINMFICSISW-SAWVIKIFFNKV 346 (484)
Q Consensus 278 g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~--------~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~ 346 (484)
|++..+.+...+...++..++. ++.|+++||+++|+. +..+.... .+..+...... +...
T Consensus 293 g~s~~~~g~~~~~~~~~~~i~~-~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 363 (465)
T TIGR00894 293 RVSGKENGLLSSLPYLFAWLCS-IFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYL-------- 363 (465)
T ss_pred CcChHHhHHHHHHHHHHHHHHH-HHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHH--------
Confidence 9999999999999999888888 777999998754321 11111111 11111111111 1111
Q ss_pred HHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHH
Q 011514 347 FKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVS 426 (484)
Q Consensus 347 ~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~g 426 (484)
......+.+.+.+...+.......+..| +.+|.+.|+.+..+.++..++
T Consensus 364 ------------------------------~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~l~~~i~ 412 (465)
T TIGR00894 364 ------------------------------TIIILTLANAVSSGPLAGVLINSLDLAP-RFLGFIKGITGLPGFIGGLIA 412 (465)
T ss_pred ------------------------------HHHHHHHHHHHhhhhhhhhhhchhhcCh-hHHHHHHHHHHHHHHHHHHHH
Confidence 0222223333344444445555556666 589999999999999999999
Q ss_pred HHHHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHHHHHHhc
Q 011514 427 PLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMS 469 (484)
Q Consensus 427 p~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (484)
|.+.|.+.+.. +.. .| ...|.+.++..+++.+......
T Consensus 413 p~l~g~~~~~~-~~~-~~---~~~f~~~~~~~~i~~i~~~~~~ 450 (465)
T TIGR00894 413 STLAGNILSQD-SKN-VW---LIVFLIMAFVNILCVIFYLIFG 450 (465)
T ss_pred HHhhheeeCCC-Cch-HH---HHHHHHHHHHHHHHHHHeeeee
Confidence 99999887642 111 01 1145556555666555544433
No 61
>PRK11043 putative transporter; Provisional
Probab=99.97 E-value=4e-28 Score=239.45 Aligned_cols=342 Identities=15% Similarity=0.076 Sum_probs=253.4
Q ss_pred HHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHH
Q 011514 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPL 88 (484)
Q Consensus 9 ~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~ 88 (484)
.+..+.+..++..++.+++.|.+|.+.+++ +.+..+.|+..+++.++..++++++|+++||+|||+.+..+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~p~~~~i~~~~--------~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~ 78 (401)
T PRK11043 7 FLVYLAGLSMLGFLATDMYLPAFKAIQADL--------QTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGL 78 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHH--------CCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHH
Confidence 334444455666777889999999888776 555667899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHh--
Q 011514 89 TLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF-- 166 (484)
Q Consensus 89 ~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~-- 166 (484)
.+..++.+++.++++ ++.+++.|+++|++. +...+...+++.|++|++++++..+.......+|..++|.+++.
T Consensus 79 ~~~~~~~~~~~~~~~---~~~l~~~~~l~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~ 154 (401)
T PRK11043 79 SLFALGSLGMLWVES---AAQLLVLRFVQAVGV-CSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLL 154 (401)
T ss_pred HHHHHHHHHHHHhcC---HHHHHHHHHHHHhhh-HHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999 888999999999755 55556778899999999999999999888888888888888765
Q ss_pred --hhhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHHHHHHhhc
Q 011514 167 --LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRS 244 (484)
Q Consensus 167 --l~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (484)
.+||+.|++.+++.++..+..++ ++|++++++++ +.++..+...+
T Consensus 155 ~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--------------------------------~~~~~~~~~~~ 201 (401)
T PRK11043 155 NHFGWQAIFATLFAITLLLILPTLR-LKPSKKARKQS--------------------------------QDALTFKQLLK 201 (401)
T ss_pred hcCChHHHHHHHHHHHHHHHHHHHH-cCCCCCccccc--------------------------------hHHHHHHHHHc
Confidence 48999999888777766555443 55443211110 00112233455
Q ss_pred cchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHH
Q 011514 245 SVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAAC 324 (484)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~ 324 (484)
+|.++...+...+.......+..+.|.+.++ +|+++.+.+.......++..++. +..+++.||+++|+..........
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~g~~~~~~~~~~~~g~-~~~~~l~~r~~~~~~~~~~~~~~~ 279 (401)
T PRK11043 202 SKTYLGNVLIFAACSAAFFAWLTGSPFILEQ-MGYSPADIGLSYVPQTIAFLVGG-YGCRAALQKWGGEQLLPWLLVLFA 279 (401)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHhHHHHHH-cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCHHHHHHHHHHHHH
Confidence 6666655544444444555666778888876 59999999988877777777777 777899999998887655554444
Q ss_pred HHHHHH---hhc--cchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHH
Q 011514 325 INMFIC---SIS--WSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIV 399 (484)
Q Consensus 325 ~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 399 (484)
++...+ ... +..+. ......+.+.+.+...+...+..
T Consensus 280 ~~~~~~~~~~~~~~~~~~~--------------------------------------~~~~~~~~~~~~~~~~~~~~~~~ 321 (401)
T PRK11043 280 VSVIAIWLASLLSHPSLVP--------------------------------------LLIPFCVMAAANGAIYPIVVAQA 321 (401)
T ss_pred HHHHHHHHHHHhccCcHHH--------------------------------------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 433322 111 11111 12334456777777888887777
Q ss_pred hcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 011514 400 SKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 436 (484)
Q Consensus 400 ~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~ 436 (484)
.+..| +++|++.|+.+..+..+...++.+.|.+.+.
T Consensus 322 ~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~ 357 (401)
T PRK11043 322 LRPFP-QATGKAAALQNTLQLGLCFLASLLVSALIST 357 (401)
T ss_pred hhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 77776 6899999999999999999999999988763
No 62
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.97 E-value=1.2e-28 Score=241.24 Aligned_cols=331 Identities=13% Similarity=0.140 Sum_probs=244.4
Q ss_pred HHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHHHHHHHHHHHh
Q 011514 21 GFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAY 100 (484)
Q Consensus 21 ~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~i~~~~~~~ 100 (484)
.++.++..|.+|.+.+++ +.+..+.|++.+++.++..++.+++|+++||+|||+.+..+.++.+++..++.+
T Consensus 4 ~~~~~~~~p~~~~~~~~~--------~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~ 75 (377)
T PRK11102 4 PLAIDMYLPALPVIAADF--------GVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACAL 75 (377)
T ss_pred chHHHHHhccHHHHHHHh--------CCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHH
Confidence 356678889999999876 555667899999999999999999999999999999999999999999999999
Q ss_pred ccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHh----hhhHHHHHHH
Q 011514 101 RRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF----LSTTSAFQAA 176 (484)
Q Consensus 101 ~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~----l~~~~~f~~~ 176 (484)
.++ ++.+++.|++.|++. +...+...+++.|+.|+|+|++++++.+....+|..++|.+++. .+||+.|++.
T Consensus 76 ~~~---~~~~~~~~~l~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~ 151 (377)
T PRK11102 76 AQT---IDQLIYMRFLHGLAA-AAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVL 151 (377)
T ss_pred Hcc---HHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHH
Confidence 998 788899999999755 66667899999999999999999999999999999999988765 4899999998
Q ss_pred HHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHHHHHHhhccchhHHHHHHHH
Q 011514 177 TIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAF 256 (484)
Q Consensus 177 ~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (484)
+.+..+..+...+.+||++++++++ +.+.++..+..+...++|..+...+..+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (377)
T PRK11102 152 ALAAILAAALVFFFIPETLPKERRQ---------------------------PFHLRTTIRNFASLFRHKRVLGYMLASG 204 (377)
T ss_pred HHHHHHHHHHHHHhCCccCcccccC---------------------------CCChHHHHHHHHHHHcChHHHHHHHHHH
Confidence 8787777777767777764322111 0000011122333556677666666655
Q ss_pred HHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhh---c
Q 011514 257 FSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSI---S 333 (484)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~---~ 333 (484)
+.......+..+.|.+..+.+|+++.+.+.......++..++. +..+++.||+|+|+.+..+..+..+..+.+.. .
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~-~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (377)
T PRK11102 205 FSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMT-IINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALL 283 (377)
T ss_pred HHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555555566667778888789999999999999999988888 77799999999999888777654433222211 1
Q ss_pred c-chhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHH
Q 011514 334 W-SAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQ 412 (484)
Q Consensus 334 ~-~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~ 412 (484)
+ ..+. ......+...+.+...+.......|..| +++|++.
T Consensus 284 ~~~~~~--------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~ 324 (377)
T PRK11102 284 DLGFWA--------------------------------------LVVGVAAFVGCVSMISSNAMAVILDEFP-HMAGTAS 324 (377)
T ss_pred hhhHHH--------------------------------------HHHHHHHHHHHHHHhhHHHHHHHhcccc-ccchHHH
Confidence 1 1111 0222223333444445555566777766 8899999
Q ss_pred HHHHHHHH-HHHHHHHHHH
Q 011514 413 GCISGISS-FANIVSPLIF 430 (484)
Q Consensus 413 g~~~~~~~-lg~~~gp~i~ 430 (484)
+..+.... ++..+++.+.
T Consensus 325 ~~~~~~~~~~g~~~g~~~~ 343 (377)
T PRK11102 325 SLAGTLRFGIGAIVGALLS 343 (377)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 98776643 4555555443
No 63
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.97 E-value=1.9e-30 Score=235.34 Aligned_cols=360 Identities=17% Similarity=0.231 Sum_probs=254.6
Q ss_pred HhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHHHHHHHHHHHhccch
Q 011514 25 MMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSI 104 (484)
Q Consensus 25 ~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~i~~~~~~~~~~~ 104 (484)
+-..|.....++++.....++.+.+....|++.+.+.+.+.++++.+|.++||+|||+++.++++..+++..+.+.++|
T Consensus 42 ~~L~~~~~~~V~~F~~a~~~~~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~- 120 (451)
T KOG2615|consen 42 SSLYPFVVFMVRDFNIAIGEPDGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRN- 120 (451)
T ss_pred cchhHHHHHhhHHHHHhhCCcccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHH-
Confidence 4444455555555422122333456778999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHhhhh------HHHHHH---
Q 011514 105 SFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLST------TSAFQA--- 175 (484)
Q Consensus 105 ~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~------~~~f~~--- 175 (484)
+..+.++|++.|++- |... ...++++|+.++|+|+.+++.++..+++|.++||++|+++.. +.+|..
T Consensus 121 --F~afv~aR~l~Gi~k-gnl~-v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~ 196 (451)
T KOG2615|consen 121 --FAAFVLARFLGGIFK-GNLS-VIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCL 196 (451)
T ss_pred --HHHHHHHHHhhhhcc-CchH-HHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHH
Confidence 866677799999865 7774 799999999999999999999999999999999999998644 233333
Q ss_pred -HHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHHHHHHhhccc-------h
Q 011514 176 -ATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSV-------T 247 (484)
Q Consensus 176 -~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~ 247 (484)
..++...-.....+++||+-+.+++.++.++..+..+++ .+.... +...... ..+|+ .
T Consensus 197 ~v~i~a~~~v~~~~~~lpETL~~rk~~~~~~~~~~~~~~~---~~~~~~----------~~~~~v~-~lrn~p~~~~i~~ 262 (451)
T KOG2615|consen 197 LVFILAAGDVTFFPWFLPETLPLRKRNDEHSTLQEAADDR---LALLKF----------ARIFKVA-ALRNPPLLDFISV 262 (451)
T ss_pred HHHHHHHHHHHHHHHhCCccccchhhcccccchhhhhhhh---hhhcch----------hhhhhhh-hhcCccccchHHH
Confidence 222222223334456999976655441111111111100 000000 0000000 11111 1
Q ss_pred hHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhc--chHHHHHhHHHHHH
Q 011514 248 LSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILG--EAKLLSLGLFAACI 325 (484)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g--~~~~~~~~~~~~~~ 325 (484)
+....+..+.+...+..+....+.+.++.+|+++.+.|.+++..++.+.+.+..+ .+..+|.+ .+-.+..++.++.-
T Consensus 263 ~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~-~~~l~~~~~~~~a~l~~~l~~~vP 341 (451)
T KOG2615|consen 263 LRIFGLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLAL-VPILPRYKGNIKAVLLFSLLLIVP 341 (451)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHhhcCccCCChhhheeeeehhhHHHHHHHHhc-cccccccccchhhHHHHHHHHHHH
Confidence 2233445555555555666666666678899999999999999999999999555 44455544 44555666666666
Q ss_pred HHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCC
Q 011514 326 NMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGP 405 (484)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~ 405 (484)
.++++........ +.....+..+..+...+.....+.+..|+
T Consensus 342 ~~llls~~~~~~~--------------------------------------l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~ 383 (451)
T KOG2615|consen 342 AFLLLSLARTPVV--------------------------------------LYLGSTLKSFSTASVVTCLTSLVHKYGPQ 383 (451)
T ss_pred HHHHHhccccchh--------------------------------------hhHHHHHHHHHHHHhhHHHHHHHHhcCCc
Confidence 6666766666554 24455577888888899999999999999
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 011514 406 NEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGA 442 (484)
Q Consensus 406 ~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~ 442 (484)
++||++.|+..+.+.++.++||.+.|.+..+..+.+.
T Consensus 384 ~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~Ws~~~~~ 420 (451)
T KOG2615|consen 384 SQRGTLNGIFRSLGALARAIGPLVSGVIFSWSQGAQP 420 (451)
T ss_pred ccchHHHHHHHHHHHHHHHhhhhhhheeEEEecCCCc
Confidence 9999999999999999999999999999988644444
No 64
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.97 E-value=5.6e-28 Score=243.00 Aligned_cols=378 Identities=12% Similarity=0.067 Sum_probs=263.6
Q ss_pred hHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhccccc-----Cchh
Q 011514 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQY-----GRKA 82 (484)
Q Consensus 8 ~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-----Grk~ 82 (484)
|+...++...+..++......+.+|.+.++. +.+..+.|.. +...... +..+++|+++||+ ||||
T Consensus 12 ~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~~--------g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr 81 (491)
T PRK11010 12 PNSAILLILGFASGLPLALTSGTLQAWMTVE--------NIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRR 81 (491)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--------CCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCch
Confidence 3455666677778888889999999998775 3344455664 3334443 5789999999999 9998
Q ss_pred H-hHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHH
Q 011514 83 M-LTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGT 161 (484)
Q Consensus 83 ~-l~~~~~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~ 161 (484)
. +..+.+..+++...+++.+..+.++.+.+.+++.|++. +...+...+++.|++|+|+|+++.++...+..+|.++++
T Consensus 82 ~~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~-a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~ 160 (491)
T PRK11010 82 GWLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCS-ASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSG 160 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHH
Confidence 6 66777888888887777644333778888999999765 667778999999999999999999999999999999998
Q ss_pred HhhHh-----hhhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchH
Q 011514 162 LAARF-----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIR 236 (484)
Q Consensus 162 ~l~~~-----l~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (484)
.++.. .|||.+|++.+++.++..+..+ ..||++++++++ + + ..++..
T Consensus 161 ~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~-~~~e~~~~~~~~------------------~------~---~~~~~~ 212 (491)
T PRK11010 161 GLALWLADRYLGWQGMYWLMAALLIPCIIATL-LAPEPTDTIPVP------------------K------T---LEQAVV 212 (491)
T ss_pred HHHHHHHhcccCHHHHHHHHHHHHHHHHHHHH-hcCCCccccccc------------------c------c---hhhhHH
Confidence 66543 4899999998877766654444 477754321110 0 0 000111
Q ss_pred HHHHHhhccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHH-HHHHHHHHHHHHHhhhhhcchHH
Q 011514 237 DLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAG-LAGTISQLLFMPLLAPILGEAKL 315 (484)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~g~~~~ 315 (484)
+.++.+.+++..+...+..++..........+.+.|+.+.+|++..+.+......+ ++.+++. ++.+++.||+++|+.
T Consensus 213 ~~l~~~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~-ll~G~L~dr~g~~~~ 291 (491)
T PRK11010 213 APLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGA-LYGGILMQRLSLFRA 291 (491)
T ss_pred HHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhHHHH
Confidence 12233445566666665556666666666777888887778999999999875444 5666776 888999999999887
Q ss_pred HHHhHHHHHHHHHHH---hhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhh
Q 011514 316 LSLGLFAACINMFIC---SISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFAT 392 (484)
Q Consensus 316 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 392 (484)
+..+..+.++..+.+ ....+... . +.....+..+..+...
T Consensus 292 l~i~~~l~~l~~l~~~~l~~~~~~~~----------~---------------------------l~~~~~l~~~~~g~~~ 334 (491)
T PRK11010 292 LMIFGILQGVSNAGYWLLSITDKNLY----------S---------------------------MGAAVFFENLCGGMGT 334 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccHH----------H---------------------------HHHHHHHHHHHHHHHH
Confidence 766555444433222 22211111 0 0122223334444455
Q ss_pred hHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHHHHHHhcc
Q 011514 393 PSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSH 470 (484)
Q Consensus 393 ~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (484)
+...+...+..+++.+++.+|+.+....+|..+++.+.|.+.|.. ++.. .|.+.+++.+.+.+.....++
T Consensus 335 ~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~-G~~~-------~f~~~~~~~l~~l~~~~~~~~ 404 (491)
T PRK11010 335 AAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAH-GWPT-------FYLFSVAAAVPGLLLLLVCRQ 404 (491)
T ss_pred HHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHH-------HHHHHHHHHHHHHHHHHHHHh
Confidence 666788889999999999999999999999999999999999976 5443 456666667766666655543
No 65
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.97 E-value=1e-28 Score=245.05 Aligned_cols=380 Identities=11% Similarity=0.032 Sum_probs=253.8
Q ss_pred hhHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHH
Q 011514 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (484)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~ 86 (484)
++.++.+....++..++.+...|.+|.+.++.. +.+..+.|++.+++.++..++++++|+++||+|||+++.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-------g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~ 81 (420)
T PRK09528 9 NPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDIN-------GLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLW 81 (420)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHH
Confidence 566777778888888988999999999987743 5666788999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHH---hccch--hhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHH
Q 011514 87 PLTLSIIPLAILA---YRRSI--SFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGT 161 (484)
Q Consensus 87 ~~~~~~i~~~~~~---~~~~~--~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~ 161 (484)
+..+.++...... .++.. .......+.++..|... ....+....+..+. ++++++.++......++|..+||
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~g~~~g~~~~~~~~g~~i~~ 158 (420)
T PRK09528 82 IISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGF-LAGAGAIEAYIERV--SRRSGFEYGRARMWGSLGWALCA 158 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh-ccchhhhhhHHHHH--HhhccccchhhHHhhhHHHHHHH
Confidence 7666554433221 11110 00112233344444222 22222333333222 34667788888888999999999
Q ss_pred HhhHhh---hhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHHH
Q 011514 162 LAARFL---STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDL 238 (484)
Q Consensus 162 ~l~~~l---~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (484)
.+++.+ +|+.+|++.+++.++..+..++..||++++.+.+ + + +++ +++..+.++.
T Consensus 159 ~~~g~l~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------------~-~~~-------~~~~~~~~~~ 216 (420)
T PRK09528 159 FIAGILFNINPQINFWLGSGSALILLVLLFFAKPDAPSTAKVA-N-------------A-LGA-------NASAVSLKDA 216 (420)
T ss_pred HHHHHHHhcCchHhHHHHHHHHHHHHHHHhcccccccchhhhc-c-------------c-hhc-------ccccccHHHH
Confidence 998875 7899999888777666655555444433221110 0 0 000 0011122332
Q ss_pred HHHhhccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhc---CcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHH
Q 011514 239 ICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQF---HFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKL 315 (484)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~ 315 (484)
. ...++|.++...+..+.............|.|+.+.+ +.+..+.+.+.+...+...++. +..+++.||+++|+.
T Consensus 217 ~-~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~g~l~dr~g~~~~ 294 (420)
T PRK09528 217 L-ALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIM-FFAPFIINRIGAKNA 294 (420)
T ss_pred H-HHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCcchh
Confidence 2 2455676665555444444444455556777766543 4566677888888888888887 777999999999999
Q ss_pred HHHhHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHH
Q 011514 316 LSLGLFAACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSF 395 (484)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 395 (484)
+..+..+..++..+..+.++.+. +.....+.+.+.+...+..
T Consensus 295 ~~~~~~l~~~~~~l~~~~~~~~~--------------------------------------~~~~~~l~g~~~~~~~~~~ 336 (420)
T PRK09528 295 LLLAGTIMAVRIIGSGFATGPLE--------------------------------------VSILKLLHAFEVPFLLVGV 336 (420)
T ss_pred hHHHHHHHHHHHHHHHhcccHHH--------------------------------------HHHHHHHHHHHHHHHHHHH
Confidence 98888888888777777666555 1333335566666666677
Q ss_pred HHHHhcccCCCchhHHHHH-HHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHHHHH
Q 011514 396 RSIVSKQVGPNEQGKAQGC-ISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSL 466 (484)
Q Consensus 396 ~~~~~~~~p~~~~g~~~g~-~~~~~~lg~~~gp~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (484)
..++.+..|++.+++..+. .++...+|..++|.+.|++.|.. +++. .|.+.+++.++......
T Consensus 337 ~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~-G~~~-------~f~~~~~~~~i~~~~~~ 400 (420)
T PRK09528 337 FKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSI-GFQG-------TYLILGGIVLLFTLISV 400 (420)
T ss_pred HHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhh-CchH-------HHHHHHHHHHHHHHHHH
Confidence 7888899999999988766 67788999999999999999986 5554 44555555444443333
No 66
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.97 E-value=1e-27 Score=233.44 Aligned_cols=371 Identities=13% Similarity=0.087 Sum_probs=262.8
Q ss_pred hhHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHH
Q 011514 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (484)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~ 86 (484)
+|+++...++.++......+..|..+.+.++ +.+++..+.+++.+++.++..++.++.|.+.||+|.|+++..
T Consensus 33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~-------~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~ 105 (462)
T PRK15034 33 RRNLWISVSCLLLAFCVWMLFSAVTVNLNKI-------GFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVF 105 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-------hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHH
Confidence 4667777777777777777888877776542 236777788999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhc-----cchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHH-
Q 011514 87 PLTLSIIPLAILAYR-----RSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCG- 160 (484)
Q Consensus 87 ~~~~~~i~~~~~~~~-----~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig- 160 (484)
+.++.++..+..+++ ++ ++.+++.|++.|++ +...+.....+++++|+++||+++|+.....++|..++
T Consensus 106 ~~ll~~i~~~~~~~a~~~~~~s---~~~lli~r~l~Gig--g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~ 180 (462)
T PRK15034 106 STAILIIPCVWLGIAVQNPNTP---FGIFIVIALLCGFA--GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQ 180 (462)
T ss_pred HHHHHHHHHHHHHHHHcccCCC---HHHHHHHHHHHHHH--HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHH
Confidence 999999999999986 67 89999999999985 44557899999999999999999999976666666544
Q ss_pred ---HHhhH------------------hhhhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCC
Q 011514 161 ---TLAAR------------------FLSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNE 219 (484)
Q Consensus 161 ---~~l~~------------------~l~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (484)
|.+.+ ..+||.++++..++.++..++.++..+|.++. +
T Consensus 181 ~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~~--~------------------- 239 (462)
T PRK15034 181 LVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIASS--R------------------- 239 (462)
T ss_pred HHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCcccc--c-------------------
Confidence 43221 23477777777767766666666655543321 1
Q ss_pred CCCCccCcccCCCCchHHHHHHhhccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHH
Q 011514 220 SNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQ 299 (484)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 299 (484)
.+.++..+ ..|+|+.|...+.+++....+.++..++|.|.++.+ +.........+..+...+.+
T Consensus 240 -------------~~~~~~~~-vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~--~~~~~l~~~~l~~l~~~l~r 303 (462)
T PRK15034 240 -------------ASIADQLP-VLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQF--PDVNILRLAFFGPFIGAIAR 303 (462)
T ss_pred -------------cCHHHHHH-HhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc--ChHHHHHHHHHHHHHHHHHH
Confidence 12344333 667789999999998888888888889999998865 33332333344456677777
Q ss_pred HHHHHHhhhhhcchHHHHHhHHHHHHHHHHHh-hccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchh
Q 011514 300 LLFMPLLAPILGEAKLLSLGLFAACINMFICS-ISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVP 378 (484)
Q Consensus 300 ~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 378 (484)
.++|+++||+|+++++.++.....+...... ..+.... ...+. ..
T Consensus 304 -plgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~~~---------------------~~~~~------------~~ 349 (462)
T PRK15034 304 -SVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGTGS---------------------GNFIA------------FY 349 (462)
T ss_pred -HhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhccccc---------------------cHHHH------------HH
Confidence 6779999999999999888876666553322 2221100 00000 02
Q ss_pred hHHHHHHHhhhhhhhHHHHHHhcccCC---------------------CchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 011514 379 YATTAFSVLVVFATPSFRSIVSKQVGP---------------------NEQGKAQGCISGISSFANIVSPLIFSPLTALF 437 (484)
Q Consensus 379 ~~~~~~g~~~~~~~~~~~~~~~~~~p~---------------------~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~ 437 (484)
.......++.+..+.....++.+.+|+ ++.|.+.|+....+.+|+++-|.+.|...+.+
T Consensus 350 ~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~ 429 (462)
T PRK15034 350 AVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMT 429 (462)
T ss_pred HHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHc
Confidence 222233344444455555555555553 16788999999999999999999999999987
Q ss_pred hcCCCCcccCchHHHHHHHHHHHHHHHHHH
Q 011514 438 LSKGAPFNFPGFSIMCIGLASMVAFIQSLM 467 (484)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (484)
+++.. .+....+..+++..+.+.
T Consensus 430 g~~~~-------~~~~~~~~~~~~~~~~w~ 452 (462)
T PRK15034 430 GSPVG-------AMKVFLIFYIVCVLLTWL 452 (462)
T ss_pred CCcHH-------HHHHHHHHHHHHHHHHHH
Confidence 55554 345555556665555543
No 67
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.97 E-value=1.3e-28 Score=242.13 Aligned_cols=350 Identities=13% Similarity=0.048 Sum_probs=245.2
Q ss_pred HHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHHHHHHHHH
Q 011514 18 FLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAI 97 (484)
Q Consensus 18 ~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~i~~~~ 97 (484)
+.+.++.....+..+.+.++... +.++.+.+........+...++..+++++.|+++||+|||+++..+.++..++.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~ 81 (394)
T TIGR00883 3 AVEWFDFYLYGFAAVLVFHTFFP-PSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLL 81 (394)
T ss_pred chhHHHHHHHHHHHHHHHHHhcC-CCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 34556666666666666666532 12233332222223344455666788999999999999999999999999999999
Q ss_pred HHhccchhh-----HHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHh------
Q 011514 98 LAYRRSISF-----FYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF------ 166 (484)
Q Consensus 98 ~~~~~~~~~-----~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~------ 166 (484)
+++++++.. .+.+++.|+++|++. +...+...+++.|+.|+++|++..+..+.+..+|.++++.++..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~r~l~G~~~-~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~ 160 (394)
T TIGR00883 82 IGLLPSYATIGIWAPILLLLARLIQGFSL-GGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLG 160 (394)
T ss_pred HhhCCChhhhHHHHHHHHHHHHHHHHhhc-cccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999988421 135789999999755 66667899999999999999999999999999999999876532
Q ss_pred ------hhhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHHHHH
Q 011514 167 ------LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLIC 240 (484)
Q Consensus 167 ------l~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (484)
.+||++|++.+++.++.. ......||+++.+++++ +.++...+.++
T Consensus 161 ~~~~~~~~w~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~--- 212 (394)
T TIGR00883 161 DDALLEWGWRIPFLVSAVLVLIGL-YLRRNLEETPVFEKAQE------------------------KHKKKRGPIRE--- 212 (394)
T ss_pred HHHhhccchHHHHHHHHHHHHHHH-HHHHhcCCChhHHHHHh------------------------ccccccCCHHH---
Confidence 479999988776554443 33344566543322110 00011122333
Q ss_pred Hhhccc--hhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHH
Q 011514 241 LLRSSV--TLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSL 318 (484)
Q Consensus 241 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~ 318 (484)
..+++ .++......++..........+.|.|.++.+|.++.+.+.......+...++. ++.+++.||+|+|+.+..
T Consensus 213 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~g~l~dr~g~~~~~~~ 290 (394)
T TIGR00883 213 -TLTKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITI-PLSGALSDRIGRRPVLII 290 (394)
T ss_pred -HHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHH-HHHHHHHHHhchHHHHHH
Confidence 22223 35555666666666667778889999988889999999999888888888888 677999999999997765
Q ss_pred hHHHHHHHH-HH-Hhhc--cchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhH
Q 011514 319 GLFAACINM-FI-CSIS--WSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPS 394 (484)
Q Consensus 319 ~~~~~~~~~-~~-~~~~--~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 394 (484)
...+..+.. .. .... .+.+. ......+.+++.+...+.
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------~~~~~~~~g~~~~~~~~~ 332 (394)
T TIGR00883 291 FTVLAALLAVPLLMALLDSGSFTL--------------------------------------FFFLVLGLALIGGMYTGP 332 (394)
T ss_pred HHHHHHHHHHHHHHHHhcCCchHH--------------------------------------HHHHHHHHHHHHHHHhhh
Confidence 444333222 22 1121 12222 133344666777778888
Q ss_pred HHHHHhcccCCCchhHHHHHH-HHHHHHHHHHHHHHHHHHHHhh
Q 011514 395 FRSIVSKQVGPNEQGKAQGCI-SGISSFANIVSPLIFSPLTALF 437 (484)
Q Consensus 395 ~~~~~~~~~p~~~~g~~~g~~-~~~~~lg~~~gp~i~g~l~~~~ 437 (484)
.++.+.|.+|+++|+++.|+. +....+|..++|.+.|.+.|+.
T Consensus 333 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~ 376 (394)
T TIGR00883 333 MGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMT 376 (394)
T ss_pred HHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHc
Confidence 899999999999999999985 4556688889999999999986
No 68
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.97 E-value=4.1e-28 Score=239.42 Aligned_cols=379 Identities=12% Similarity=0.107 Sum_probs=260.9
Q ss_pred HHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCc-hhHhHHHHHH
Q 011514 12 HLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGR-KAMLTLPLTL 90 (484)
Q Consensus 12 ~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Gr-k~~l~~~~~~ 90 (484)
-+....|+...+.++..|.++.+.++.. +.+..+.|++.+++.++..++++++|.++||+|| |+++.++.+.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~-------g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~ 78 (418)
T TIGR00889 6 KLKFMSFLQWFIWGSWLVTLGSYMSKTL-------HFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFA 78 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHH
Confidence 3566778888899999999999887643 5666788999999999999999999999999965 7788888888
Q ss_pred HHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHH----h----hcCCccchhHHHHHHHHHHHhHHhHHHH
Q 011514 91 SIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYV----A----DNISERQRASAFGILLGVLSASFVCGTL 162 (484)
Q Consensus 91 ~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i----~----~~~~~~~r~~~~~~~~~~~~~g~~ig~~ 162 (484)
..+...+..+.++ ++.+++.|++.|++. +...+...+.. . |..+...|.|..| .+|..+||.
T Consensus 79 ~~~~~~~~~~~~~---~~~~~~~~~l~~~~~-~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~ 148 (418)
T TIGR00889 79 GALLLFFAAQVTT---PAGMFPVLLANSLAY-MPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMW 148 (418)
T ss_pred HHHHHHHHHHhcC---HHHHHHHHHHHHHHH-ccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHH
Confidence 8888888888888 788888999988754 44445554443 2 3333345555555 367888888
Q ss_pred hhHhhhh---HHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHHHH
Q 011514 163 AARFLST---TSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLI 239 (484)
Q Consensus 163 l~~~l~~---~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (484)
+++.++. +.+|++.+++.++..++ .+.+||+++.+++++ .+ .++ ..+...
T Consensus 149 l~g~l~~~~~~~~f~~~~~~~~~~~~~-~~~~~e~~~~~~~~~-----------------------~~-~~~--~~~~~~ 201 (418)
T TIGR00889 149 AVSLLDIELSNIQLYITAGSSALLGVF-ALTLPDIPVAKSTAK-----------------------MS-IKV--MLGLDA 201 (418)
T ss_pred HHHHhcccchhHHHHHHHHHHHHHHHH-HhcCCCCCCCccccc-----------------------cC-HHH--HhhhhH
Confidence 8876543 23577777666665544 456787643221110 00 000 000112
Q ss_pred HHhhccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcCh--------hhHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 011514 240 CLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNK--------NQFADLMLIAGLAGTISQLLFMPLLAPILG 311 (484)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g 311 (484)
+...|+|.++...+..++..........+.+.|.++. |.++ .+.+...+...+..+++. +..+++.||+|
T Consensus 202 ~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~-~~~g~l~dr~g 279 (418)
T TIGR00889 202 FILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHEF-GRNPEFADSFVVKNASIWMSLSQFSEIFFI-LTIPFFLKRFG 279 (418)
T ss_pred HHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHHh-cccccccchhhhhhHHHHHHHHHHHHHHHH-HHHHHHHHHhC
Confidence 2356778877777777776666666667778888764 5443 566888888888888888 77799999999
Q ss_pred chHHHHHhHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhh
Q 011514 312 EAKLLSLGLFAACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFA 391 (484)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 391 (484)
+|+.+..+.++..++...+......+. ..+ .+.....+.+++.+..
T Consensus 280 ~r~~l~~~~~~~~v~~~l~~~~~~~~~----------------------~~~------------~l~l~~~l~g~~~~~~ 325 (418)
T TIGR00889 280 IKKVMLLSLVAWALRFGFFAYGDPEYF----------------------GYA------------LLFLSMIVYGCAFDFF 325 (418)
T ss_pred cHHHHHHHHHHHHHHHHHHHHcCcchh----------------------hHH------------HHHHHHHHHHHHHHHH
Confidence 999999999888887766655322110 000 0133455677777777
Q ss_pred hhHHHHHHhcccCCCchhHHHHHHH-HHHHHHHHHHHHHHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHHHHH-Hhc
Q 011514 392 TPSFRSIVSKQVGPNEQGKAQGCIS-GISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSL-MMS 469 (484)
Q Consensus 392 ~~~~~~~~~~~~p~~~~g~~~g~~~-~~~~lg~~~gp~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 469 (484)
.+....++.|..|+++||+++|+.+ ....+|..+||.++|.++|+.++... +.+. ..|.+.+++.+++.+... ..+
T Consensus 326 ~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~-~~~~-~~f~~~~~~~~i~~~l~~~~~~ 403 (418)
T TIGR00889 326 NISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGT-FDWQ-TMWLFFAGYIAILAVLFMIFFK 403 (418)
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccC-CchH-HHHHHHHHHHHHHHHHHHHHhC
Confidence 8888889999999999999999997 56889999999999999998633110 0011 144555555444444444 344
Q ss_pred cCC
Q 011514 470 HTP 472 (484)
Q Consensus 470 ~~~ 472 (484)
++.
T Consensus 404 ~~~ 406 (418)
T TIGR00889 404 YSH 406 (418)
T ss_pred Ccc
Confidence 433
No 69
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.97 E-value=2.1e-28 Score=271.73 Aligned_cols=378 Identities=11% Similarity=0.058 Sum_probs=263.6
Q ss_pred hhHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHH
Q 011514 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (484)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~ 86 (484)
.+.+..++...++..++.++....++.+....+ ..+.........++..+++.++++++++++|.++||+|||+++..
T Consensus 10 ~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~ 87 (1140)
T PRK06814 10 SRRFAPLFWTQFFGAFNDNFLKNALVILILYGL--SGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKI 87 (1140)
T ss_pred ccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHh--ccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHH
Confidence 345566777777777776655444333322211 111112233467899999999999999999999999999997643
Q ss_pred ---HHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHh
Q 011514 87 ---PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLA 163 (484)
Q Consensus 87 ---~~~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l 163 (484)
..+...+..+.....++ ++.++++|+++|++. +...|+..+++.|++++++|++++++.+++.++|.++||.+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~s---~~~l~~~~~l~gi~~-a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l 163 (1140)
T PRK06814 88 LKFAEIGIAALAIYGFHLNS---VPLLFAALFLMGIHS-ALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTII 163 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHhh---HHHHHHHHHHHHHHH-HhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHH
Confidence 22222222233333467 899999999999755 77779999999999999999999999999999999999999
Q ss_pred hHhh----hhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHHHH
Q 011514 164 ARFL----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLI 239 (484)
Q Consensus 164 ~~~l----~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (484)
++.+ +|+..|.... +..+..++..+.+|++++..+... ...+..++..+.+
T Consensus 164 ~g~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~ 218 (1140)
T PRK06814 164 GGLATISGNFVILVALLM-GIAVLGWLASLFIPKTGNAAPDLK------------------------IDRNIIRSTITLL 218 (1140)
T ss_pred HHHHHhccccHHHHHHHH-HHHHHHHHHHhhCCCCCCCCCCCe------------------------eccchHHHHHHHH
Confidence 9874 7888884444 434444445555776643322110 0000111234456
Q ss_pred HHhhccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHh
Q 011514 240 CLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLG 319 (484)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~ 319 (484)
+.+.++|.++...+..++.++.......++|.|+++.+|.++.+.|.+.+..+++.++++ ++.+++.|+..+++.+..+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~-~~~g~l~~~~~~~~~~~~~ 297 (1140)
T PRK06814 219 KYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGS-FLASKLSEGRITLLYVPIG 297 (1140)
T ss_pred HHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHH-HHHHHHhCCceeeeeehHH
Confidence 678888999988888888887878888899999999999999999999999999999998 6779999887766665555
Q ss_pred HHHHHHHHHHHhhccc--hhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHH
Q 011514 320 LFAACINMFICSISWS--AWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRS 397 (484)
Q Consensus 320 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 397 (484)
.++.++..+.+.+... ... .......+.|....+. | .+.+..+++|++.+...+...+
T Consensus 298 ~~~~~~~~~~l~~~~~~~~~~------~~~~~~~~~~~~~~~~--~------------~~~~~~~~~g~~~~~~~~~~~~ 357 (1140)
T PRK06814 298 ALLMGLFGLDLAFASSSVPAE------PAQLKSILVFLSKRHG--W------------RILIDLFGLAAAGGLYIVPLFA 357 (1140)
T ss_pred HHHHHHHHHHHHhcccccccc------cccccchhhhhccccc--H------------HHHHHHHHHHHHHHHhHHHHHH
Confidence 5555444443333200 000 0000000111000000 0 0134455678888888888999
Q ss_pred HHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 011514 398 IVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 436 (484)
Q Consensus 398 ~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~ 436 (484)
++++.+|++.+|+++|+.++...++..+++.+.|.+.+.
T Consensus 358 ~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~ 396 (1140)
T PRK06814 358 ALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQAL 396 (1140)
T ss_pred HHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999998864
No 70
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.97 E-value=1.1e-27 Score=234.42 Aligned_cols=336 Identities=12% Similarity=0.001 Sum_probs=248.6
Q ss_pred HHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCch----hHhHHHHHHH
Q 011514 16 TVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRK----AMLTLPLTLS 91 (484)
Q Consensus 16 ~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk----~~l~~~~~~~ 91 (484)
..+....+.++..|.+|.+.+|+ +.+..+.|++.+++.++..++++++|+++||+||| +.+.+.....
T Consensus 12 ~~~~~~~~~g~~~p~l~~~l~~~--------g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~ 83 (382)
T PRK11128 12 SYFGYFFAYGVFLPFWSVWLKGQ--------GYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF 83 (382)
T ss_pred HHHHHHHHHHHHhhhHHHHHHhc--------CCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH
Confidence 35566677899999999999876 55667889999999999999999999999999994 3333222221
Q ss_pred HHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHh----h
Q 011514 92 IIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF----L 167 (484)
Q Consensus 92 ~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~----l 167 (484)
........++ +|.+++.|++.|++. +...|...+++.|+ +++|+++.+..+...++|..+||.+++. +
T Consensus 84 --~~~~~~~~~~---~~~l~i~~~l~g~~~-~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~ 155 (382)
T PRK11128 84 --AVAFWFGAHS---FWLLFVAIGLFNLFF-SPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWF 155 (382)
T ss_pred --HHHHHHhccc---HHHHHHHHHHHHHHH-cccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHc
Confidence 2223344567 788889999999755 55667788888877 4568888888888889999999999886 4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHHHHHHhhccch
Q 011514 168 STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVT 247 (484)
Q Consensus 168 ~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (484)
|||.+|+..++...+..+ ..+..||++++++++ + +.++..++ ++.+.++|.
T Consensus 156 g~~~~f~~~~~~~~~~~~-~~~~~~~~~~~~~~~------------------~------~~~~~~~~----~~~i~~~~~ 206 (382)
T PRK11128 156 GEQAILWILTAGVASMLL-GQLLRPTIMPQGESR------------------Q------QESAGWPA----WKALLKEPT 206 (382)
T ss_pred ChhHHHHHHHHHHHHHHH-HHHccCCCCCccccc------------------c------ccccccch----HHHHHcChh
Confidence 899999887754444333 333344432211110 0 00001112 233677888
Q ss_pred hHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHH
Q 011514 248 LSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINM 327 (484)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~ 327 (484)
++...+..++..........+.|.|.++ .|.++.+.|.+.+...+...+.. +..+++.||+++++.+..+....++..
T Consensus 207 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~-~~~g~l~~r~~~~~~l~~~~~~~~~~~ 284 (382)
T PRK11128 207 VWRFLLCVSLLQGSHAAYYGFSAIYWQA-AGYSASTIGYLWSLGVVAEVLIF-AFSNRLFRRWSARDLLLLSAICGVVRW 284 (382)
T ss_pred HHHHHHHHHHHHHHhHhHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHH
Confidence 8888887777777777788888999876 59999999999888888777777 777999999999999988888888887
Q ss_pred HHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCc
Q 011514 328 FICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNE 407 (484)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~ 407 (484)
+.+...++.+. +....++.+++.+...+....+..+. ++++
T Consensus 285 ~~~~~~~~~~~--------------------------------------~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~ 325 (382)
T PRK11128 285 GLMGSTTALPW--------------------------------------LIVIQILHCGTFTVCHLAAMRYIAAR-PGSE 325 (382)
T ss_pred HHHHhhhhHHH--------------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHC-CHhh
Confidence 77766665555 24445577888887888888888876 5667
Q ss_pred hhHHHHHHH-HHHHHHHHHHHHHHHHHHHhh
Q 011514 408 QGKAQGCIS-GISSFANIVSPLIFSPLTALF 437 (484)
Q Consensus 408 ~g~~~g~~~-~~~~lg~~~gp~i~g~l~~~~ 437 (484)
+++.++..+ ....+|..+||.++|.++|..
T Consensus 326 ~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~ 356 (382)
T PRK11128 326 VIRLQALYSALAMGGSIAIMTVLSGFLYQHL 356 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 799999887 445677799999999999986
No 71
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.97 E-value=3.8e-27 Score=232.26 Aligned_cols=368 Identities=13% Similarity=0.087 Sum_probs=254.6
Q ss_pred HHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhccccc-----Cchh-HhHHH
Q 011514 14 FVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQY-----GRKA-MLTLP 87 (484)
Q Consensus 14 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-----Grk~-~l~~~ 87 (484)
+...+..++..+...+.+|.+.++. +.+.++.|++..+... .+..+++|+++||+ |||| .+..+
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~l~~~--------g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~ 74 (402)
T PRK11902 5 LLLGFASGLPLALTSGTLQAWMTVE--------GLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLT 74 (402)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHc--------CCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHH
Confidence 3445566778889999999999887 6666778988666664 68899999999999 8875 68888
Q ss_pred HHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHh-
Q 011514 88 LTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF- 166 (484)
Q Consensus 88 ~~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~- 166 (484)
.++.+++..+..+.++...++.+++..++.+.+. +...++..+++.|+.|+|+|+++.++...+.++|.++|+.++..
T Consensus 75 ~~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l 153 (402)
T PRK11902 75 QVGLAASIAAMAFCPPHAALWPLAGLAVLVAFLS-ASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWL 153 (402)
T ss_pred HHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 8888888888888744333677777777777544 67778999999999999999999999999999999998876644
Q ss_pred ----hhhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHHHHHHh
Q 011514 167 ----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLL 242 (484)
Q Consensus 167 ----l~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (484)
.|||.+|++.+++.++..+. .+..||++++++++ ++..++.++.++.+
T Consensus 154 ~~~~~gw~~~f~i~a~~~l~~~l~-~~~~~e~~~~~~~~---------------------------~~~~~~~~~~~~~l 205 (402)
T PRK11902 154 ADRVLGWGNTYLLMAGLMLAGALT-TLWAPEPEVPARPP---------------------------RSLGEAVVGPLRDF 205 (402)
T ss_pred HhcccCHHHHHHHHHHHHHHHHHH-HHhcCCCccccccc---------------------------chhHHHHHHHHHHH
Confidence 38999999988776655443 45577754332111 00001233445557
Q ss_pred hccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHH-HHHHHHHHHHHhhhhhcchHHHHHhHH
Q 011514 243 RSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLA-GTISQLLFMPLLAPILGEAKLLSLGLF 321 (484)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~g~~~~~~~~~~ 321 (484)
++||.++...+..++..........+.+.++.+.+|+++.+.+.+....+.. ..++. ++.+++.||+++|+.+..+..
T Consensus 206 ~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~-~~~g~l~~r~g~~~~l~~~~~ 284 (402)
T PRK11902 206 FSRRGAWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGA-LAGGTLMVRLGLYRSLMLFGV 284 (402)
T ss_pred HhCcCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHH-HHHHHHHHHHhHHHHHHHHHH
Confidence 7888888777766666655444444555667777799999999988776654 56666 778999999999888776666
Q ss_pred HHHHHHHHH---hhcc-chhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHH----HHHHHhhhhhhh
Q 011514 322 AACINMFIC---SISW-SAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYAT----TAFSVLVVFATP 393 (484)
Q Consensus 322 ~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~g~~~~~~~~ 393 (484)
+..+..+.+ ...+ +.+. +.... +..+++.+...+
T Consensus 285 ~~~l~~l~~~~~~~~~~~~~~--------------------------------------~~~~~~~~~~~~g~~~~~~~~ 326 (402)
T PRK11902 285 LQAVSNLGYWVLAVTPKHLWT--------------------------------------MALAIGIENLCGGMGTAAFVA 326 (402)
T ss_pred HHHHHHHHHHHHHhcCCcHHH--------------------------------------HHHHHHHHHHHHHHHHHHHHH
Confidence 555443332 2332 2222 01111 233444455555
Q ss_pred HHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHHHHHHhccC
Q 011514 394 SFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSHT 471 (484)
Q Consensus 394 ~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (484)
....++++..| ++..+..+....++...++.++|.++|.. ++.. .|...+++.+++.+..++.+++
T Consensus 327 ~~~~~~~~~~~----~~~~~~~~~~~~l~~~~~~~~~G~l~~~~-G~~~-------~f~~~~~~~~~~~~~~~~~~~~ 392 (402)
T PRK11902 327 LLMALCNRSFS----ATQYALLSALASVGRVYVGPTSGYLVEAY-GWPG-------FYLMTVVIALPGLALLWLMRGT 392 (402)
T ss_pred HHHHhcCCCCc----HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHH-------HHHHHHHHHHHHHHHHHHHhhh
Confidence 55666666665 44456666667788877778999999987 6544 4566666666666665555544
No 72
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.97 E-value=3.6e-28 Score=235.75 Aligned_cols=332 Identities=13% Similarity=0.054 Sum_probs=247.9
Q ss_pred HHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHHHHHHHHHHHhcc
Q 011514 23 ATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRR 102 (484)
Q Consensus 23 ~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~i~~~~~~~~~ 102 (484)
......|.+|.+.+++ +.+..+.|++.+.+.++..+++++.|+++||+|||+.+..+.+...++.+.+ ..+
T Consensus 15 ~~~~~~~~lp~l~~~~--------~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~ 85 (355)
T TIGR00896 15 ALTSVGPLLPQIRSAL--------GMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAP 85 (355)
T ss_pred ccccCcccHHHHHHHh--------CCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-Hhc
Confidence 3456788999998877 5566778999999999999999999999999999999999998888888777 667
Q ss_pred chhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHhh------hhHHHHHHH
Q 011514 103 SISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL------STTSAFQAA 176 (484)
Q Consensus 103 ~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l------~~~~~f~~~ 176 (484)
+ .+.+++.|++.|++. +...+.....+.|+.| ++|+++++..+...++|..+++.+++.+ +||..|...
T Consensus 86 ~---~~~l~~~~~~~g~g~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~ 160 (355)
T TIGR00896 86 G---TALLFAGTALIGVGI-AIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWW 160 (355)
T ss_pred c---HHHHHHHHHHHHHHH-HHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHH
Confidence 7 788899999999765 5555677788888886 6899999999999999999888776542 388888776
Q ss_pred HHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHHHHHHhhccchhHHHHHHHH
Q 011514 177 TIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAF 256 (484)
Q Consensus 177 ~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (484)
+...++.. ...+||.+++++++ ++ ....+.++ ..++|..+...+..+
T Consensus 161 ~~~~~~~~---~~~~~~~~~~~~~~------------------~~--------~~~~~~~~----~~~~~~~~~~~~~~~ 207 (355)
T TIGR00896 161 ALPALLAL---LAWIPQVRRRVAAN------------------QT--------TTRLTPVR----IWRSPLAWQVTVFFG 207 (355)
T ss_pred HHHHHHHH---HHHhhhhccccCCC------------------CC--------CCCCCCch----hhcCHhHHHHHHHHH
Confidence 64433322 22345443221110 00 00011122 345566666666666
Q ss_pred HHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhh-cchHHHHHhHHHHHHHHHHHhhccc
Q 011514 257 FSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPIL-GEAKLLSLGLFAACINMFICSISWS 335 (484)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~ 335 (484)
+..........+.|.|+++ .|++..+.+...+...++.++++ +..+++.||+ ++|+.+..+..+.+++.+.+.+..+
T Consensus 208 ~~~~~~~~~~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~-~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (355)
T TIGR00896 208 LQSGLYYSLIGWLPAILIS-HGASAATAGSLLALMQLAQAASA-LLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPM 285 (355)
T ss_pred HHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHH-HhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhh
Confidence 6666677778899999987 49999999999999999999998 7779999999 4566666777777777666655443
Q ss_pred hhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccC-CCchhHHHHH
Q 011514 336 AWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVG-PNEQGKAQGC 414 (484)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p-~~~~g~~~g~ 414 (484)
... .....+.|++.+...|...+.+.+..+ ++++++..++
T Consensus 286 ~~~---------------------------------------~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~ 326 (355)
T TIGR00896 286 HGL---------------------------------------WAWALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAM 326 (355)
T ss_pred hHH---------------------------------------HHHHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHH
Confidence 333 223346788888888887777665554 5677999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 011514 415 ISGISSFANIVSPLIFSPLTALFLSKGA 442 (484)
Q Consensus 415 ~~~~~~lg~~~gp~i~g~l~~~~~~~~~ 442 (484)
.+...+++..++|.+.|.+.|+.+++..
T Consensus 327 ~~~~~~~~~~~gp~~~G~l~~~~g~~~~ 354 (355)
T TIGR00896 327 AQSIGYLLAALGPLFVGVLHDISGNWLM 354 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccCC
Confidence 9999999999999999999999855543
No 73
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.97 E-value=1.6e-27 Score=230.67 Aligned_cols=384 Identities=18% Similarity=0.156 Sum_probs=264.5
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhcc
Q 011514 43 LDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCE 122 (484)
Q Consensus 43 ~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 122 (484)
.++.+.+. .-+.+.+++.+|.+++++..|.++||+|||..+.++.++..++.+++.++...+.+.+++++|++.|+..
T Consensus 53 ~s~~~~~~-lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~- 130 (485)
T KOG0569|consen 53 LSDSTLDL-LWSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLAC- 130 (485)
T ss_pred CChHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHh-
Confidence 34444444 4478899999999999999999999999999999999999988888887766555899999999999866
Q ss_pred chhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHh------hhhHHHHHHHHHHHHHHHHHHHHHcccCCC
Q 011514 123 GSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF------LSTTSAFQAATIVSMLAAAYMRVFLKDDVP 196 (484)
Q Consensus 123 g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~------l~~~~~f~~~~~~~~i~~~~~~~~lpe~~~ 196 (484)
|.......-|+.|..|++.||......+.+..+|.++|..++.- -.|++.+....+.+++..+ ...++||+|+
T Consensus 131 gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~-~l~~~PESPk 209 (485)
T KOG0569|consen 131 GLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLA-LLPFLPESPK 209 (485)
T ss_pred HHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHH-HHhcCCCCcc
Confidence 77777899999999999999999999999999999999665532 3588888888866655544 4556999998
Q ss_pred CCCC-CCCCCCccccc---ccccCCCCCCCC------ccCcccCCCCchHHHHHHhhccchhHH----HHHHHHHHhchh
Q 011514 197 NDDD-DDLTRPIITEE---TEGVNQNESNSP------VKIPVCKKIPSIRDLICLLRSSVTLSQ----AAVVAFFSGLSE 262 (484)
Q Consensus 197 ~~~~-~~~~~~~~~~~---~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 262 (484)
+.-. ++|+++++... ....+++++.+. .++..+++..++++ +.+++.++. .+...+...+..
T Consensus 210 ~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~----~~~~~~lR~~~~i~~~v~~~qq~sG 285 (485)
T KOG0569|consen 210 YLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQ----LLKNPTLRRPLLIGIVVSFAQQFSG 285 (485)
T ss_pred hHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHH----HhcCcchhHHHHHHHHHHHHHHhcC
Confidence 7433 33333333221 111111111100 01111123335556 334444333 333333333333
Q ss_pred h-hhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhhccchhhHHH
Q 011514 263 G-GMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVIKI 341 (484)
Q Consensus 263 ~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (484)
. ....+....+++ .|++..++-+.....+....+.. +++.++.||.|||++++.+..++.+..+++.........
T Consensus 286 i~ai~~Yst~i~~~-aG~~~~~a~~an~~~g~v~~~~t-~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~-- 361 (485)
T KOG0569|consen 286 INAIFFYSTSIFKT-AGFTPEEAQYANLGIGIVNLLST-LVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNS-- 361 (485)
T ss_pred cceeHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHH--
Confidence 2 334344444554 49999999999999999999998 888999999999999999999988887776544321110
Q ss_pred hhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhh-hhhhhHHHHHHhcccCCCchhHHHHHHHHHHH
Q 011514 342 FFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLV-VFATPSFRSIVSKQVGPNEQGKAQGCISGISS 420 (484)
Q Consensus 342 ~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 420 (484)
. ..+.++. .+...+++.... -+..|..+-+.+|.+|++.|..+++....++.
T Consensus 362 ~--------------~~~~~y~-------------~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w 414 (485)
T KOG0569|consen 362 F--------------GSWLSYL-------------CIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNW 414 (485)
T ss_pred h--------------hhHHHHH-------------HHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHH
Confidence 0 0000000 122222333333 33578888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHHHHHHhccCCC
Q 011514 421 FANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSHTPA 473 (484)
Q Consensus 421 lg~~~gp~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (484)
+.+++-...+..+.+.. +. . .|+...+...+..+..++.-+|+|
T Consensus 415 ~~~fiv~~~fp~l~~~~-g~-~-------~filF~i~~~~~~i~~~~~lPETk 458 (485)
T KOG0569|consen 415 LSNFIVGFAFPPLQNVI-GP-Y-------VFILFVIPLAIFLIYLYRYLPETK 458 (485)
T ss_pred HHHHHHHHHHHHHHHHh-cc-h-------hhHHHHHHHHHHHHHHHHhCcccC
Confidence 99999999999998887 33 2 455555555555555555555544
No 74
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.97 E-value=4.3e-28 Score=236.33 Aligned_cols=344 Identities=17% Similarity=0.169 Sum_probs=245.3
Q ss_pred HHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHH
Q 011514 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPL 88 (484)
Q Consensus 9 ~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~ 88 (484)
..+..++..++...+.....|.+|.+.++.+ +.+..+.|++.+.+.++..+++++.|+++||+|||+.+..+.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~ 74 (366)
T TIGR00886 2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDL-------GLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSL 74 (366)
T ss_pred chHHHHHHHHHHHHHHHHhHHhhhHHHHHHh-------CCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHH
Confidence 3456777777888888888999996443332 556667899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcc-chhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHh-
Q 011514 89 TLSIIPLAILAYRR-SISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF- 166 (484)
Q Consensus 89 ~~~~i~~~~~~~~~-~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~- 166 (484)
++..++.+++++++ + ++.+++.|+++|+++ +.. +...++++|++|+++|+++.++.....++|..+++.++..
T Consensus 75 ~~~~i~~~~~~~~~~~---~~~~~~~~~~~g~~~-~~~-~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l 149 (366)
T TIGR00886 75 LLLAIPCLWAGLAVQS---YSVLLLLRLFIGIAG-GSF-ASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPI 149 (366)
T ss_pred HHHHHHHHHHHHHhhh---HHHHHHHHHHHHHhc-hhh-HhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 99999999999998 8 888899999999764 544 5678999999999999999999997777776666655432
Q ss_pred -------------hhhHHHH-HHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCC
Q 011514 167 -------------LSTTSAF-QAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKI 232 (484)
Q Consensus 167 -------------l~~~~~f-~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (484)
.+||+.| ...+++..+..++.....+|++++++++++.+ ..++.. . .+.
T Consensus 150 ~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~----~--~~~ 212 (366)
T TIGR00886 150 IGSLIFGAGLPAHLAWGWAFVIVPAGILLLPALLIFFVGADTPPGKPATGKLS-----------FKGARW----S--VGT 212 (366)
T ss_pred HHHHHhcccccccccccchhHHHHHHHHHHHHHHHHHhcccCCcccccchhcc-----------cccccc----c--ccc
Confidence 2699999 44455555555555555676654322110000 000000 0 001
Q ss_pred CchHHHHHHhhccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcc
Q 011514 233 PSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGE 312 (484)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~ 312 (484)
+..++..+ ..++|+++...+..++..........+.|.|+++.+|+++.+.+.+.....+...++. ++.+++.||+|+
T Consensus 213 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~g~l~~r~g~ 290 (366)
T TIGR00886 213 GALGDQLK-VFRDRHTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLAR-PLGGAISDRLGG 290 (366)
T ss_pred hhHHHHHH-HHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHh-hccchHHHhhcc
Confidence 11112222 4456777777777666666667788899999999999999999988888888888888 777999999999
Q ss_pred hHHHHHhHHHHHHHHHHHhhccc----hhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhh
Q 011514 313 AKLLSLGLFAACINMFICSISWS----AWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLV 388 (484)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 388 (484)
|+....+......+...+..... .+. ......+...+.
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------~~~~~~~~~~~~ 332 (366)
T TIGR00886 291 ARKLLMSFLGVAMGAFLVVLGLVSPLSLAV--------------------------------------FIVLFVALFFFS 332 (366)
T ss_pred chhHHHHHHHHHHHHHHHHhcCCCcchHHH--------------------------------------HHHHHHHHHHHh
Confidence 88777766665555544443222 111 022222344445
Q ss_pred hhhhhHHHHHHhcccCCCchhHHHHHHHHHHHHH
Q 011514 389 VFATPSFRSIVSKQVGPNEQGKAQGCISGISSFA 422 (484)
Q Consensus 389 ~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg 422 (484)
+...+...+...+..| +++|++.|+.+...++|
T Consensus 333 g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 333 GAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred ccccchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 5555666677777777 79999999999988765
No 75
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.97 E-value=1.8e-27 Score=265.26 Aligned_cols=360 Identities=15% Similarity=0.119 Sum_probs=265.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhH
Q 011514 6 EIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLT 85 (484)
Q Consensus 6 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~ 85 (484)
+.+.+..+++..++..++.......+..+....+ +. +.+....+++.+++.++..++++++|+++||+|||++++
T Consensus 7 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~ 81 (1146)
T PRK08633 7 KIIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAY--DG---SEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIR 81 (1146)
T ss_pred hhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHc--Cc---ccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHH
Confidence 3556667777777777666544444433333322 22 223456799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh---ccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHH
Q 011514 86 LPLTLSIIPLAILAY---RRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTL 162 (484)
Q Consensus 86 ~~~~~~~i~~~~~~~---~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~ 162 (484)
.+.++..+..++..+ .++ ++.+++.|+++|++. +...++..++++|++|+++|++++++.+.+.++|.++||.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~---~~~l~~~r~l~G~~~-~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~ 157 (1146)
T PRK08633 82 IVKLFEVGLTLLIVLAYYLGW---FWLAFAVTFLLGAQS-AIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTA 157 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHcc---HHHHHHHHHHHHHHH-HhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHH
Confidence 988776666555443 456 889999999999755 7777899999999999999999999999999999999999
Q ss_pred hhHhhh-------------hHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCccc
Q 011514 163 AARFLS-------------TTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVC 229 (484)
Q Consensus 163 l~~~l~-------------~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (484)
+++.+. |++.+.+..+...+..++..+.+||+++....+. + ....
T Consensus 158 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~-----~~~~ 215 (1146)
T PRK08633 158 LFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFAYRLPKVPAAAPEVF-----------------D-----KKKY 215 (1146)
T ss_pred HHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHHhcCcCCCCCCcccc-----------------c-----cccc
Confidence 988742 2333333333333333344445677654332210 0 0000
Q ss_pred CCCCchHHHHHHhhccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChh-hHHHHHHHHHHHHHHHHHHHHHHhhh
Q 011514 230 KKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKN-QFADLMLIAGLAGTISQLLFMPLLAP 308 (484)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~ 308 (484)
......++.++.++++|.++...+..++..........++|.|+++.+|++.. +.+++.+..+++.+++. ++.+++.|
T Consensus 216 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~-~~~g~l~~ 294 (1146)
T PRK08633 216 LFPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGS-LLAGRLSG 294 (1146)
T ss_pred ccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHH-HHHHHHhC
Confidence 01112344455677788888777777777767777788899999998999998 88999999999888888 77799999
Q ss_pred hhcchHHHHHhHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhh
Q 011514 309 ILGEAKLLSLGLFAACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLV 388 (484)
Q Consensus 309 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 388 (484)
|+++++.+.++.++.+++.+.+.+..+.+. ..+..++.+++.
T Consensus 295 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------~~~~~~~~g~~~ 336 (1146)
T PRK08633 295 RHIELGLVPLGALGLALSLFLLPTAPSLAS--------------------------------------VLVLFFLFGFSA 336 (1146)
T ss_pred CceEccchhHHHHHHHHHHHHHHHhhhHHH--------------------------------------HHHHHHHHHHHH
Confidence 999988888887777777776665554433 244455778888
Q ss_pred hhhhhHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011514 389 VFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTA 435 (484)
Q Consensus 389 ~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~ 435 (484)
++..+...+++.+..|++.||+++|+.+++..++..+++.+++.+..
T Consensus 337 ~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~ 383 (1146)
T PRK08633 337 GLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSG 383 (1146)
T ss_pred HHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888889999999999999999999999999999888887776654
No 76
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.97 E-value=4e-27 Score=231.79 Aligned_cols=375 Identities=11% Similarity=0.057 Sum_probs=259.4
Q ss_pred hHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHH
Q 011514 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLP 87 (484)
Q Consensus 8 ~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~ 87 (484)
|.++.+....++...+.+...|.+|.+.++.. +.+..+.|++.+++.++..++++++|+++||+|||+.++.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~ 74 (396)
T TIGR00882 2 TNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVN-------GLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWI 74 (396)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHH
Confidence 45677777888889999999999999987643 55567789999999999999999999999999999999887
Q ss_pred HHHHHHHHHHH---Hhccch--hhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHH
Q 011514 88 LTLSIIPLAIL---AYRRSI--SFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTL 162 (484)
Q Consensus 88 ~~~~~i~~~~~---~~~~~~--~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~ 162 (484)
....+++.... .+.+.. .......+.|++.|++. +...+....+..|..+ ++++.++......++|..+||.
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~g~~ 151 (396)
T TIGR00882 75 ISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVF-SAGAGAIEAYIEKVSR--NSNFEYGKARMFGCVGWALCAS 151 (396)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh-ccchhhHHHHHHHhhh--hcccccchhhhhcccHHHHHHH
Confidence 76665544322 222210 11344566788888654 5556677777777543 3455677888888999999999
Q ss_pred hhHh---hhhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHHHH
Q 011514 163 AARF---LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLI 239 (484)
Q Consensus 163 l~~~---l~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (484)
+++. .+||.+|++.+.+.++..++.+...||++++++.+ +..+ + +++.++.++ .
T Consensus 152 ~~g~l~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~--~-----~~~~~~~~~-~ 208 (396)
T TIGR00882 152 IAGILFSIDPQIVFWLGSGFALILMLLLMFAKPKAPSSATVA---------------NALG--A-----NASAFSLKL-A 208 (396)
T ss_pred HHhhhhccCchHHHHHHHHHHHHHHHHHHHhCCCCchhhhhh---------------cccc--c-----ccCCCCHHH-H
Confidence 9886 48999999988887777666555444443221110 0000 0 000111222 2
Q ss_pred HHhhccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhc---CcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHH
Q 011514 240 CLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQF---HFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLL 316 (484)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~ 316 (484)
+...++|.++...+..+...........+.+.|.++.+ +.+..+.|...+...+...+.. ...+++.||+++|+.+
T Consensus 209 ~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~-~~~g~l~~r~g~~~~l 287 (396)
T TIGR00882 209 LELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIM-FCAPLIINRIGAKNAL 287 (396)
T ss_pred HHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHH-HHHHHHHHHhccchhH
Confidence 33566777776666665555555556667788887765 4556667888888888888887 6669999999999999
Q ss_pred HHhHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHH
Q 011514 317 SLGLFAACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFR 396 (484)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 396 (484)
.++..+.++........++.+. +.....+.+.+.........
T Consensus 288 ~~~~~l~~l~~~~~~~~~~~~~--------------------------------------~~~~~~l~g~~~~~~~~~~~ 329 (396)
T TIGR00882 288 LIAGTIMSVRIIGSSFATTALE--------------------------------------VVILKMLHAFEVPFLLVGCF 329 (396)
T ss_pred HHHHHHHHHHHHHHHhcCChHH--------------------------------------HHHHHHHHHHHHHHHHHHHH
Confidence 8888888877776666555554 12233355555554444555
Q ss_pred HHHhcccCCCchhHHHHH-HHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHH
Q 011514 397 SIVSKQVGPNEQGKAQGC-ISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAF 462 (484)
Q Consensus 397 ~~~~~~~p~~~~g~~~g~-~~~~~~lg~~~gp~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (484)
.+..+..|++.+++..+. .+....+|+.++|.+.|.+.|.. +++. .|.+.+++.++..
T Consensus 330 ~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~-G~~~-------~f~~~~~~~~i~~ 388 (396)
T TIGR00882 330 KYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSI-GFQG-------AYLVLGCIVLLFT 388 (396)
T ss_pred HHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhc-ccHH-------HHHHHHHHHHHHH
Confidence 667777888888887766 67889999999999999999986 6554 3455555444433
No 77
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.96 E-value=3.2e-27 Score=229.23 Aligned_cols=319 Identities=15% Similarity=0.069 Sum_probs=235.7
Q ss_pred HHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhccccc-----CchhH-hHHHHHHHHHHHHH
Q 011514 24 TMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQY-----GRKAM-LTLPLTLSIIPLAI 97 (484)
Q Consensus 24 ~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-----Grk~~-l~~~~~~~~i~~~~ 97 (484)
.+...+.+|.+.+|. +.+..+.|+..+. .+...+ .+++|+++||+ ||||. ++.+.+..++....
T Consensus 4 ~~~~~~~~~~~~~~~--------g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~ 73 (356)
T TIGR00901 4 LGLVGNTLPYWLRSK--------NVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLI 73 (356)
T ss_pred chhHHhHHHHHHHHc--------CCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHH
Confidence 356678889888876 5556677887655 555554 89999999998 89887 56778888888777
Q ss_pred HHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHh----hh-----
Q 011514 98 LAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF----LS----- 168 (484)
Q Consensus 98 ~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~----l~----- 168 (484)
.++.++....+.+....++.+.+. +...+...+++.|++|+|+|+++.++...+.++|.++++.+++. .+
T Consensus 74 l~~~~~~~~l~~l~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~ 152 (356)
T TIGR00901 74 LSFLVPSTDLPLLAGLAFLIAFFS-ATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGL 152 (356)
T ss_pred HHcCCcchhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhccccccc
Confidence 777755444667777777888544 66678899999999999999999999999999999999988864 46
Q ss_pred ---hHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHHHHHHhhcc
Q 011514 169 ---TTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSS 245 (484)
Q Consensus 169 ---~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (484)
||.+|++.++..++..+..++..||++++++++ +++.++.++.++.++++
T Consensus 153 ~~~wr~~f~i~ai~~l~~~~~~~~~~~e~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~ 205 (356)
T TIGR00901 153 ITLWGYIFFWTALLILPGLLVTLFLAKEPQEDASVP---------------------------KPLTQAVLKPIREFFQR 205 (356)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHhccCCCcccccc---------------------------hhHHHHHHHHHHHHHHh
Confidence 999999998777665555555566643211100 00001223344445666
Q ss_pred ch---hHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHH-HHHHHHHHHHHhhhhhcchHHHHHhHH
Q 011514 246 VT---LSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLA-GTISQLLFMPLLAPILGEAKLLSLGLF 321 (484)
Q Consensus 246 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~g~~~~~~~~~~ 321 (484)
|. ++...+..++.........++.|.|+++ +|+++.+.+......+.. ..++. ++.+++.||+|+|+.+..+.+
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~-~~~g~l~~r~g~~~~l~~~~~ 283 (356)
T TIGR00901 206 KNMIQALLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGG-LIGGIIMQPLNILYALLLFGI 283 (356)
T ss_pred cCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHH-HHHHHHHhhhhHHHHHHHHHH
Confidence 64 6666666677777777888899999988 799999999888877754 45555 788999999999998888877
Q ss_pred HHHHHHHHHhhcc-c----------hhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhh
Q 011514 322 AACINMFICSISW-S----------AWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVF 390 (484)
Q Consensus 322 ~~~~~~~~~~~~~-~----------~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 390 (484)
+.++....+.+.. + .+. +.....+.+++.+.
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------~~~~~~l~~~~~~~ 325 (356)
T TIGR00901 284 VQALTNAGFVWLASNGHHDGITFPHLLM--------------------------------------LFLTITLEAVTGGL 325 (356)
T ss_pred HHHHHHHHHHHHHhcCcccccccchHHH--------------------------------------HHHHHHHHHHHhHH
Confidence 7766655444321 1 111 13344466888889
Q ss_pred hhhHHHHHHhcccCCCchhHHHHHHHHHHH
Q 011514 391 ATPSFRSIVSKQVGPNEQGKAQGCISGISS 420 (484)
Q Consensus 391 ~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 420 (484)
..+...++.+|.+|+++||+.+|+.++..+
T Consensus 326 ~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 326 GTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 999999999999999999999999988765
No 78
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.96 E-value=4.6e-28 Score=237.50 Aligned_cols=366 Identities=15% Similarity=0.125 Sum_probs=273.6
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccc
Q 011514 44 DECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEG 123 (484)
Q Consensus 44 ~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g 123 (484)
+++..+..+.|++.+.++.|+++++.+.|+++||+|-|+++..+.++.++++++.+.+.+.+. +.+++.|+++|++ .|
T Consensus 66 ~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~-~~~~~~R~lqGl~-~g 143 (466)
T KOG2532|consen 66 GEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGF-YLLLVLRFLQGLG-QG 143 (466)
T ss_pred ceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHhHHH-Hh
Confidence 467788899999999999999999999999999999999999999999999999999877553 4779999999975 48
Q ss_pred hhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHh-----hhhHHHHHHHHHHHHHHHHHHHHHcccCCCCC
Q 011514 124 SINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF-----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPND 198 (484)
Q Consensus 124 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~-----l~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~ 198 (484)
...|+...+.++|.|++||++..++..++..+|.+++..++|. +||+.+|++.++++++..++...+..|+|.++
T Consensus 144 ~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h 223 (466)
T KOG2532|consen 144 VLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSKH 223 (466)
T ss_pred HHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCcccC
Confidence 8889999999999999999999999999999999988877765 59999999999999888887777777777654
Q ss_pred CCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHHHHHHhhccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcC
Q 011514 199 DDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFH 278 (484)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 278 (484)
+.-.+ .|.+..++...+ .+..++...++++ +.+++.+|...+..+........+..+.|.|+++.+|
T Consensus 224 ~~is~------~El~~I~~~k~~---~~~~~~~~vP~~~----i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~ 290 (466)
T KOG2532|consen 224 PNISE------KELKYIEKGKSE---AHVKKKPPVPYKA----ILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLG 290 (466)
T ss_pred CCCCH------HHHHHHHhcccc---cccCCCCCCCHHH----HHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhC
Confidence 32100 000000000000 0000012335555 7788999999999999999999999999999999999
Q ss_pred cChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcc---------hHHHHHhHHHHHHHHHHHhhccchhhHHHhhhhHHHH
Q 011514 279 FNKNQFADLMLIAGLAGTISQLLFMPLLAPILGE---------AKLLSLGLFAACINMFICSISWSAWVIKIFFNKVFKL 349 (484)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (484)
+|..+.|++.++..+...+.. ++.|.++||..+ |..-.++....++.++.+++.+.....
T Consensus 291 f~v~~~G~~salP~l~~~~~k-~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~---------- 359 (466)
T KOG2532|consen 291 FDVRETGFLSALPFLAMAIVK-FVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRL---------- 359 (466)
T ss_pred CChhhhhHHHHHHHHHHHHHH-HHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcch----------
Confidence 999999999999999999998 788999998754 223355666667777777766642220
Q ss_pred HHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHh-hhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHH
Q 011514 350 LLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVL-VVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPL 428 (484)
Q Consensus 350 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~ 428 (484)
........+.+ .+...+..+.-..+.. |++.+.++|+.+....++.+++|.
T Consensus 360 ---------------------------~a~~~l~~~~~~~g~~~~Gf~~~~~~~a-pq~a~~l~g~~~~~~~~~~~~~P~ 411 (466)
T KOG2532|consen 360 ---------------------------LAVILLTIAIGLSGFNISGFYKNHQDIA-PQHAGFVMGIINFVGALAGFIAPL 411 (466)
T ss_pred ---------------------------HHHHHHHHHHHHcccchhhhHhhhhhcc-chHHHHHHHHHHHHHHHHHHHHHH
Confidence 01111122222 2222333333333334 489999999999999999999999
Q ss_pred HHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHHHHHHh
Q 011514 429 IFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMM 468 (484)
Q Consensus 429 i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (484)
+.|.+....-..++.. +|++.+++.+++.+.....
T Consensus 412 ~vg~~~~~~t~~eW~~-----VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 412 LVGIIVTDNTREEWRI-----VFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred heeeEeCCCCHHHHHH-----HHHHHHHHHHHhchheeEe
Confidence 9999984210112222 6777777777766554443
No 79
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.96 E-value=1.9e-26 Score=230.26 Aligned_cols=348 Identities=14% Similarity=0.104 Sum_probs=255.5
Q ss_pred HHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccc----cCchh-HhHHHHHHHH
Q 011514 18 FLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQ----YGRKA-MLTLPLTLSI 92 (484)
Q Consensus 18 ~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr----~Grk~-~l~~~~~~~~ 92 (484)
+......++..+.++.+..+.+ ++++.+.|++.++..+..++..|+.|.++|| +|||| .++.+....+
T Consensus 9 ~~~~~~~~~~~~~l~~~~~~~~-------g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~ 81 (437)
T TIGR00792 9 FGNNFIFAIVSTYLLFFYTDVL-------GLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFS 81 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHcc-------CCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHH
Confidence 3444555666666777766543 6677888999999999999999999999998 67754 5678888888
Q ss_pred HHHHHHHhccchh---hHHHHHHHHHHhhhhccchhhHhhhHHHhhcC-CccchhHHHHHHHHHHHhHHhHHHHhhH---
Q 011514 93 IPLAILAYRRSIS---FFYAYYALRTLTAMVCEGSINCLALAYVADNI-SERQRASAFGILLGVLSASFVCGTLAAR--- 165 (484)
Q Consensus 93 i~~~~~~~~~~~~---~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~ig~~l~~--- 165 (484)
++.+++...++.+ ..+.+++.+++.+++. +...+...++..|.+ ++++|++..++.+....+|..+++.+.+
T Consensus 82 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~ 160 (437)
T TIGR00792 82 IVLVLLFTTPDFSATGKLVYAYITYILLGLFY-SFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLV 160 (437)
T ss_pred HHHHHHHhCCCCCcchHHHHHHHHHHHHHHHH-HhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888887766531 2456677788888654 444456788889987 4789999999998888887665543321
Q ss_pred --------hhhhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHH
Q 011514 166 --------FLSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRD 237 (484)
Q Consensus 166 --------~l~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (484)
..+||..+.+.+++..+..+...+..||++++.+++ ++++.+.++
T Consensus 161 ~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~---------------------------~~~~~~~~~ 213 (437)
T TIGR00792 161 SYFGGGDDKFGWFMFALVLALIGVVSLIICFFGTKERYSEIPKN---------------------------IEKKLSLKQ 213 (437)
T ss_pred HHhCCCcccccHHHHHHHHHHHHHHHHHHHHcCCEecCCCCCcc---------------------------cccCCCHHH
Confidence 247999999988888877777767677754211110 011124566
Q ss_pred HHHHhhccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHH
Q 011514 238 LICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLS 317 (484)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~ 317 (484)
.++.+.++|.++...+..++..........+.+.|.++.++ ++.+.+.+.....++.+++. ++.+++.||+|+|+.+.
T Consensus 214 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~-~~~~~l~~r~g~~~~~~ 291 (437)
T TIGR00792 214 IFKALFKNDQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGV-LLFPRLVKKFGRKILFA 291 (437)
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCcHHHHH
Confidence 67778888998888888887777776666666777776666 55566777777778888887 66799999999999998
Q ss_pred HhHHHHHHHHHHHhhccc-hhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHH
Q 011514 318 LGLFAACINMFICSISWS-AWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFR 396 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 396 (484)
.+..+.+++.+.+.+..+ .+. ......+.+++.+...+..+
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~--------------------------------------~~~~~~~~g~~~~~~~~~~~ 333 (437)
T TIGR00792 292 GGILLMVLGYLIFFFAGSNLPL--------------------------------------ILVLIILAGFGQNFVTGLVW 333 (437)
T ss_pred HHHHHHHHHHHHHHHcchhHHH--------------------------------------HHHHHHHHHHHHHHHHHHHH
Confidence 888887777766655432 222 13344466777888888888
Q ss_pred HHHhcccC-------CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 011514 397 SIVSKQVG-------PNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKG 441 (484)
Q Consensus 397 ~~~~~~~p-------~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~ 441 (484)
++.+|..| ++.+|.++|+.+....++..+++.+.|.+.+.. ++.
T Consensus 334 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~-G~~ 384 (437)
T TIGR00792 334 ALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGII-GYV 384 (437)
T ss_pred HHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCC
Confidence 88888765 566899999999999999999999999999986 543
No 80
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.96 E-value=3.6e-25 Score=204.05 Aligned_cols=349 Identities=16% Similarity=0.133 Sum_probs=280.6
Q ss_pred hHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHH
Q 011514 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLP 87 (484)
Q Consensus 8 ~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~ 87 (484)
-.+..+....++.++......+.+|.+.+.+ +++..+.+++...+..++.+++++.|.+.+|+|+|+-++.+
T Consensus 13 ~~~v~~t~lFfl~G~~~~l~diLip~l~~~f--------~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lg 84 (422)
T COG0738 13 LAFVLLTSLFFLWGFITCLNDILIPHLKEVF--------DLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLG 84 (422)
T ss_pred eHHHHHHHHHHHHHHHhhcchhhHHHHHHHh--------CccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHH
Confidence 3444555556777788888899999888776 77788899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHhh
Q 011514 88 LTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL 167 (484)
Q Consensus 88 ~~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l 167 (484)
+.++++++.++.-+.+...+..++++-++.|.+. +...++++.+++...|+++..+.+++.+..+++|.++||.+++.+
T Consensus 85 L~l~avg~~lF~pAa~~~~y~~FL~~lFila~Gi-~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~l 163 (422)
T COG0738 85 LLLYAVGAALFWPAASSKSYGFFLVALFILASGI-GLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSL 163 (422)
T ss_pred HHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhh-HHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 9999999999975544444788899999999655 888889999999999999999999999999999999999988752
Q ss_pred -----------------------hhHHHHHHHHHHHHHHHHHHHH-HcccCCCCCCCCCCCCCcccccccccCCCCCCCC
Q 011514 168 -----------------------STTSAFQAATIVSMLAAAYMRV-FLKDDVPNDDDDDLTRPIITEETEGVNQNESNSP 223 (484)
Q Consensus 168 -----------------------~~~~~f~~~~~~~~i~~~~~~~-~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (484)
.++.+|...+....+..+.... ..||.++..+++
T Consensus 164 ils~~~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~~~~~---------------------- 221 (422)
T COG0738 164 ILSGVALTMSAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVAAPSL---------------------- 221 (422)
T ss_pred HHhhhhhccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCcccccc----------------------
Confidence 2467777776554444333322 122222221111
Q ss_pred ccCcccCCCCchHHHHHHhhccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHH
Q 011514 224 VKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFM 303 (484)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (484)
.+.++. ....++++|.++...+..|++...+....++++.|+.+..|.+..+.+...+..-.+.++++ +++
T Consensus 222 ------~~~~~~--~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGR-Fig 292 (422)
T COG0738 222 ------GASGSA--GLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGR-FIG 292 (422)
T ss_pred ------cccccc--hHHHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHH-HHH
Confidence 011110 23337788999999999999999999999999999999879999999999999999999999 777
Q ss_pred HHhhhhhcchHHHHHhHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHH
Q 011514 304 PLLAPILGEAKLLSLGLFAACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTA 383 (484)
Q Consensus 304 ~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (484)
.++.+|+...+.+.....+..+.++...+.++.+. ++...+
T Consensus 293 ~~lm~~~~~~k~Laf~a~~~ill~~~~~l~~g~v~---------------------------------------~~~l~~ 333 (422)
T COG0738 293 SALMSRIKPEKYLAFYALIAILLLLAVALIGGVVA---------------------------------------LYALFL 333 (422)
T ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHHHHHhcChHH---------------------------------------HHHHHH
Confidence 88888999999988888887777777778887666 777789
Q ss_pred HHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 011514 384 FSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 437 (484)
Q Consensus 384 ~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~ 437 (484)
.|++.+..+|...+...+..| ++.. ..|..-...-+|+++-|.+.|++.|..
T Consensus 334 ig~F~simfPTIfslal~~l~-~~ts-~~s~~l~maivGGAiiP~l~G~i~d~~ 385 (422)
T COG0738 334 IGLFNSIMFPTIFSLALKNLG-EHTS-VGSGLLVMAIVGGAIIPPLQGVIADMF 385 (422)
T ss_pred HHHHhHHHHHHHHHHHHhccC-cccc-ccceeeeeheecchHHHHHHHHHHHhh
Confidence 999999999999999999999 4433 344445566678899999999999987
No 81
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.96 E-value=1.1e-24 Score=213.90 Aligned_cols=373 Identities=12% Similarity=0.093 Sum_probs=249.6
Q ss_pred HHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHH--HHHHHHHHHHHHhhhhh-cccccCchhHhHH
Q 011514 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQ--QAIIGLGTLVMMPVIGN-LSDQYGRKAMLTL 86 (484)
Q Consensus 10 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~--~s~~~l~~~~~~~~~G~-l~Dr~Grk~~l~~ 86 (484)
...+....+..++..++..|.+|.+.+|. +.+..+.|++ .++..+...+.+|+++. .+||+||||..++
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~~--------g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~ 74 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLRED--------GAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVL 74 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHc--------CCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHH
Confidence 44556667888888999999999999887 4555677886 46778889899999955 7999999998755
Q ss_pred HHHH-HHHHHHHHH-hccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhh
Q 011514 87 PLTL-SIIPLAILA-YRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAA 164 (484)
Q Consensus 87 ~~~~-~~i~~~~~~-~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~ 164 (484)
...+ ......... +........+++..-++.+.+. ....+...++..|..++++++...+....+..+|.++|+...
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~ 153 (390)
T TIGR02718 75 PMQCLVSACLASLALVGPDVAGAGWAVGLLACASLAS-ATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGT 153 (390)
T ss_pred HHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 5433 232222222 2111111223334444444333 556677888888988888888888888888888999888654
Q ss_pred H----hhhhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHHHHH
Q 011514 165 R----FLSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLIC 240 (484)
Q Consensus 165 ~----~l~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (484)
+ ..+||.+|++.+.+..+..+..++..||++++++++ ++ ..++ .+
T Consensus 154 ~~l~~~~gw~~~f~~~a~l~~~~~~~~~~~~~~~~~~~~~~---------------------------~~---~~~~-~~ 202 (390)
T TIGR02718 154 LVLFGKFGQRPAFLLVACVPLASLVCVLWLKDRAVASPEAP---------------------------LA---RRAS-LF 202 (390)
T ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCCCcCccccc---------------------------hh---hHHH-HH
Confidence 4 469999999999887776666544333322111000 00 1111 23
Q ss_pred HhhccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhH
Q 011514 241 LLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGL 320 (484)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~ 320 (484)
...|+|.++......++..........+.+.|++|. |+++++.|......+....+.+.+..+++.||+|+|+.+..+.
T Consensus 203 ~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~-G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~ 281 (390)
T TIGR02718 203 RFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVDA-GWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGV 281 (390)
T ss_pred HHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHhc-CCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 356677788777777888777788888899999885 9999999999888876555554477899999999999888776
Q ss_pred HHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHh
Q 011514 321 FAACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVS 400 (484)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 400 (484)
.+.++...........+.. ...+. +.....+.++..+...+...+...
T Consensus 282 ~~~~~~~~~~~~~~~~~~~--------------------~~~~~------------~~~~~~~~~~~~g~~~~~~~~~~~ 329 (390)
T TIGR02718 282 GLAGSLALLWFAQAAFWLA--------------------PGIAV------------AWSCSAFGSLITGITSVAIYTAFM 329 (390)
T ss_pred HHHHHHHHHHHHHHHcccC--------------------CcHHH------------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6553332222111111000 00000 011222334556666777777777
Q ss_pred cccCC-CchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHH
Q 011514 401 KQVGP-NEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFI 463 (484)
Q Consensus 401 ~~~p~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (484)
+..++ +++|+.++..+...++|..++|.++|.++|.. +++. .|.+.+++.+++..
T Consensus 330 ~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~-G~~~-------~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 330 RFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRF-GYAG-------GFLSGTVLAVLAIL 385 (390)
T ss_pred HHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccHH-------HHHHHHHHHHHHHH
Confidence 77766 88999999999999999999999999999986 5544 44555555555443
No 82
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.95 E-value=5.8e-28 Score=225.61 Aligned_cols=368 Identities=14% Similarity=0.164 Sum_probs=254.8
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhH
Q 011514 4 EKEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAM 83 (484)
Q Consensus 4 ~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~ 83 (484)
++..+...++++...+...+.+.+..+++...+.+ +++....|++++++.+.+.+++|+.|+++|||+||++
T Consensus 29 ~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~f--------ni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v 100 (493)
T KOG1330|consen 29 KSPTLTLVILCLVNLMNYADRYTIAGVLKEVQTYF--------NISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRV 100 (493)
T ss_pred ccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhc--------CCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceE
Confidence 34456677888899999999888888777776555 4445566999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHh
Q 011514 84 LTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLA 163 (484)
Q Consensus 84 l~~~~~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l 163 (484)
+..|..++.++.++.+++.. +|++.++|.+.|+ +.+...|.++++++|.+|+++|++.+++++.+..+|..+|.+.
T Consensus 101 ~~vG~~iW~~Av~~~~fs~~---Fwq~~l~R~~vGi-GeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vv 176 (493)
T KOG1330|consen 101 IAVGIFIWTLAVFASGFSNH---FWQVLLCRGFVGI-GEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVV 176 (493)
T ss_pred EeeHHHHHHHHHHHHHHHHH---HHHHHHHHHHhcc-chhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEe
Confidence 99999999999999999977 9999999999997 5688889999999999999999999999999999998888777
Q ss_pred hHhh-----hhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHHH
Q 011514 164 ARFL-----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDL 238 (484)
Q Consensus 164 ~~~l-----~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (484)
+... .||+.|+..++++++..++..++++|+++...++.+ . +..........+++
T Consensus 177 gs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~~~----------------~---~~~~~~~~ts~~kD- 236 (493)
T KOG1330|consen 177 GSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPERGARDEVD----------------G---ENKMVKPFTSVWKD- 236 (493)
T ss_pred eeeeccCccceEEEEEeehHHHHHHHHHHHhhccCcccccccccc----------------c---CCcCCCCccchHHH-
Confidence 6552 499999999999999999999999998765333210 0 00001111223334
Q ss_pred HHHhhccchhHHHHHHHHHHhchhhhhHHHHHHHHh---hhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhc----
Q 011514 239 ICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLK---AQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILG---- 311 (484)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g---- 311 (484)
.+.+.++|.+....+......+..+.+.-+.|.+.. +..|++..+..++..+...++.++. +.++.++||+.
T Consensus 237 l~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGv-l~Ggiisd~~~~~~~ 315 (493)
T KOG1330|consen 237 LKVLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGV-LFGGIISDKLSRIFP 315 (493)
T ss_pred HHHHHccCceeeehHHHHHHHHhccccchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhh-eehHHHHHHHHHhcc
Confidence 333555566555555555555555554445554333 3335666665566666666677776 77788888743
Q ss_pred chHHHHHhHHHHHHHH-------HHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHH
Q 011514 312 EAKLLSLGLFAACINM-------FICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAF 384 (484)
Q Consensus 312 ~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (484)
+........+..+.+. .+......... + ..+..+++
T Consensus 316 ~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~------------------------~-------------~~~il~~~ 358 (493)
T KOG1330|consen 316 NSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSM------------------------I-------------FGLILFLV 358 (493)
T ss_pred cccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHH------------------------H-------------HHHHHHHH
Confidence 2122222222222221 11111111111 0 02222233
Q ss_pred HHhhhhhhh-HHHHHHhcccCCCchhHHHHHHHHHHHHHHH-HHHHHHHHHHHhhhcCC
Q 011514 385 SVLVVFATP-SFRSIVSKQVGPNEQGKAQGCISGISSFANI-VSPLIFSPLTALFLSKG 441 (484)
Q Consensus 385 g~~~~~~~~-~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~-~gp~i~g~l~~~~~~~~ 441 (484)
|......+. ...-+..+.+|+++|.+++++...+..+.+- -+|.+.|.+.|+..+++
T Consensus 359 g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~l~g~~ 417 (493)
T KOG1330|consen 359 GETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDKLRGYK 417 (493)
T ss_pred HHHHHhcccccccceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHHHhhCCC
Confidence 333222222 2334667889999999999999888776554 45559999999876655
No 83
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.95 E-value=4.1e-25 Score=221.14 Aligned_cols=391 Identities=10% Similarity=-0.037 Sum_probs=261.8
Q ss_pred chhhHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccc-cCchhH
Q 011514 5 KEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQ-YGRKAM 83 (484)
Q Consensus 5 ~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr-~Grk~~ 83 (484)
+++|.++.++...+...+++....+.+|.|.++. .+.+.+..+.|++.+.+.++..++.+++|+++|| +|||++
T Consensus 7 ~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~-----~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~ 81 (475)
T TIGR00924 7 GHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQ-----AGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKT 81 (475)
T ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHH
Confidence 4567788889999999999999999999998753 1236666788999999999999999999999999 899999
Q ss_pred hHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccc---hhHHHHHHHHHHHhHHhHH
Q 011514 84 LTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQ---RASAFGILLGVLSASFVCG 160 (484)
Q Consensus 84 l~~~~~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~---r~~~~~~~~~~~~~g~~ig 160 (484)
+..+.++.+++.++.+++++ .+.+++.|++.|++. |...|...++++|++|+++ |++++++.....++|..+|
T Consensus 82 l~~~~~~~~~g~~~~~~~~~---~~~~~~~~~l~g~g~-g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig 157 (475)
T TIGR00924 82 MVLGGIVLMLGHFMLAMSIY---PDLIFYGLGTIAVGS-GLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFIS 157 (475)
T ss_pred HHHHHHHHHHHHHHHHhccc---HhHHHHHHHHHHhcc-ccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHH
Confidence 99999999999999999888 778888999999755 7777889999999998754 8889999999999999999
Q ss_pred HHhhHh----hhhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCC-CCCcccccccc--------------cCCCCCC
Q 011514 161 TLAARF----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDL-TRPIITEETEG--------------VNQNESN 221 (484)
Q Consensus 161 ~~l~~~----l~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~-~~~~~~~~~~~--------------~~~~~~~ 221 (484)
|.+++. .+|++.|.+.++..++. ++.+...++..++.+++++ .++........ .....+.
T Consensus 158 ~~l~g~l~~~~g~~~~f~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (475)
T TIGR00924 158 PLLAGVIAENYGYHVGFNLAAVGMVIG-LLTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLALLAALALVFFCAWLMHHV 236 (475)
T ss_pred HHHHHHHHHhcChHHHHHHHHHHHHHH-HHHHHHcccccccCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 998876 38999999887544443 3333333432211111000 00000000000 0000000
Q ss_pred CCccC-------------cccCCCCchHHHHHHhhccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhh----H
Q 011514 222 SPVKI-------------PVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQ----F 284 (484)
Q Consensus 222 ~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~----~ 284 (484)
..... ......+...+ ....+.+.+..+.+...+++..+....+.++.+.++..+.+... .
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~ 314 (475)
T TIGR00924 237 VIANILLMTVTLAVIIFFFRLAFKPRLDA--VARNKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPV 314 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCH--HHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECH
Confidence 00000 00000000000 00011123444555566666677777777888877764443222 5
Q ss_pred HHHHHHHHHHHHHHHHHHHH---Hhhhh-hcchHHH--HHhHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhh
Q 011514 285 ADLMLIAGLAGTISQLLFMP---LLAPI-LGEAKLL--SLGLFAACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRK 358 (484)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~---~l~~~-~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~ 358 (484)
+++.+..++..++.++++.. ++.|| .+.+... .+|.++.++++..+.+...... ...
T Consensus 315 ~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~-----------------~~~ 377 (475)
T TIGR00924 315 IWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFAD-----------------AGG 377 (475)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcC-----------------CCC
Confidence 78888888888888855532 33333 2223333 6677777777776654210000 000
Q ss_pred hhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 011514 359 QISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 436 (484)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~ 436 (484)
..++|+ ++...++.+++.....|..+++..+..|++.||+++|+......+|..+++.+.+...+.
T Consensus 378 ~~s~~~------------~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~ 443 (475)
T TIGR00924 378 LTSPWF------------MVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVP 443 (475)
T ss_pred ccCHHH------------HHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 111121 255666899999999999999999999999999999999999999999988888766543
No 84
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.95 E-value=1.6e-27 Score=217.75 Aligned_cols=355 Identities=17% Similarity=0.151 Sum_probs=267.4
Q ss_pred HHHHHHHHHHHHHHHhhHhhHHHHHHHHhC------------------------------------------CCCCCchh
Q 011514 11 SHLFVTVFLWGFATMMVVPAITDVTMMALC------------------------------------------PGLDECSL 48 (484)
Q Consensus 11 ~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~------------------------------------------~g~~~~~~ 48 (484)
..+..+.+.+.+-...+.|.+|.+..|..+ .+..+.+.
T Consensus 24 viv~ialllDnmL~~vivPiiP~~L~d~~~~p~~~~~~~~is~~~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~~~~~ 103 (464)
T KOG3764|consen 24 VIVSIALLLDNMLYTVIVPIIPGYLYDIQAEPTIIQPFFPISTAPIPPGSMSSFSSLNISTESTNASAGKSPAEAISLDR 103 (464)
T ss_pred EEEehhhhccCccceeeeccCccHHHHhccCCccCccccccccCCCCCccccceecccCCccccccccccCchhccCccc
Confidence 345677788888889999999999988742 00122344
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHh
Q 011514 49 AIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCL 128 (484)
Q Consensus 49 ~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~ 128 (484)
+.+++|++.+...+.+++.+|+.|.+.||+|+|..+++|......+++++++.++ +++++++|.+||++. ++...+
T Consensus 104 e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~s---y~~l~vAR~LQgvgs-A~~~ts 179 (464)
T KOG3764|consen 104 ENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNS---YPMLFVARSLQGVGS-AFADTS 179 (464)
T ss_pred cccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcch---hHHHHHHHHHhhhhH-HHHHhh
Confidence 5568899999999999999999999999999999999999999999999999999 899999999999755 777789
Q ss_pred hhHHHhhcCCcc-chhHHHHHHHHHHHhHHhHHHHhhHhh----hhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCC
Q 011514 129 ALAYVADNISER-QRASAFGILLGVLSASFVCGTLAARFL----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDL 203 (484)
Q Consensus 129 ~~~~i~~~~~~~-~r~~~~~~~~~~~~~g~~ig~~l~~~l----~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~ 203 (484)
..++++|.+|+| +|++++|+...+.++|.++||..||.+ |.+.+|.+.+++.++...+.++.++.++.++++.
T Consensus 180 glamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~~~~-- 257 (464)
T KOG3764|consen 180 GLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDPDST-- 257 (464)
T ss_pred hHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCcccc--
Confidence 999999999965 589999999999999999999999874 8899999999999888888777666544433221
Q ss_pred CCCcccccccccCCCCCCCCccCcccCCCCchHHHHHHhhccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhh
Q 011514 204 TRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQ 283 (484)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 283 (484)
.+..++++ +.++|..+.........+.........++.+..|.+..+..+
T Consensus 258 --------------------------~~~~~~~~----Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~ 307 (464)
T KOG3764|consen 258 --------------------------EQGTPMWS----LLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWE 307 (464)
T ss_pred --------------------------ccCccHHH----HHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcc
Confidence 12223444 556677777777666677777778888999888888866668
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHH--HHhHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhh
Q 011514 284 FADLMLIAGLAGTISQLLFMPLLAPILGEAKLL--SLGLFAACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQIS 361 (484)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~ 361 (484)
.|..+.-..+...++. -+.+.+.||++..+.+ ..+++...+.+...++.++...
T Consensus 308 ~G~~fLp~~~~y~ig~-~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~~----------------------- 363 (464)
T KOG3764|consen 308 VGLAFLPASLSYAIGT-NLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSIAQ----------------------- 363 (464)
T ss_pred eeeeecccccchhccC-chHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhHHH-----------------------
Confidence 8888888888888998 5559999999954433 3344444444444444444322
Q ss_pred HHHHHHHHHhhhccchhhHHHHHHHhhhh----hhhHHHHHHhcccCCC---chhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011514 362 VHVLLLKILKSIFMQVPYATTAFSVLVVF----ATPSFRSIVSKQVGPN---EQGKAQGCISGISSFANIVSPLIFSPLT 434 (484)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~----~~~~~~~~~~~~~p~~---~~g~~~g~~~~~~~lg~~~gp~i~g~l~ 434 (484)
+++.....+++.+. ..|... +..+....+ ..|.+.++......+|.++||.++|.+.
T Consensus 364 ---------------L~vp~~~l~~~i~~~dasl~P~l~-~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv 427 (464)
T KOG3764|consen 364 ---------------LWVPNFGLGFGIGLADASLIPTLG-YLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLV 427 (464)
T ss_pred ---------------HhhhhHHHHHHHHHHHHHHhhhhH-HhcchhhccccceeeeHHHHHHHHHHHhhhccccccchhe
Confidence 12222223333333 333333 222333223 6789999999999999999999999999
Q ss_pred HhhhcCCC
Q 011514 435 ALFLSKGA 442 (484)
Q Consensus 435 ~~~~~~~~ 442 (484)
+.. +.++
T Consensus 428 ~~i-GF~w 434 (464)
T KOG3764|consen 428 EAI-GFEW 434 (464)
T ss_pred eeh-hHHH
Confidence 886 6554
No 85
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.95 E-value=2.8e-24 Score=215.20 Aligned_cols=386 Identities=10% Similarity=0.041 Sum_probs=248.9
Q ss_pred CCCcchhhHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccc-cC
Q 011514 1 MGMEKEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQ-YG 79 (484)
Q Consensus 1 m~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr-~G 79 (484)
|++++.+|.++.++...+...+++....+.++.|.++.+ +.+....+++.+.+.....+..++.|+++|| +|
T Consensus 7 ~~~~~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~l-------g~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G 79 (489)
T PRK10207 7 MGLLQQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQL-------GFSQEQAFITFGAFAALVYGLISIGGYVGDHLLG 79 (489)
T ss_pred cchhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-------CCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccc
Confidence 444555788888888999999999999999999987654 3334455788888888888888899999999 99
Q ss_pred chhHhHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCcc--chhHHHHHHHHHHHhHH
Q 011514 80 RKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISER--QRASAFGILLGVLSASF 157 (484)
Q Consensus 80 rk~~l~~~~~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~g~ 157 (484)
|||.++.+.++..++.+.++++.+. ...++++|+++|++. |...|...+++.|.+|++ +|++++++...+.++|.
T Consensus 80 ~r~~~~~g~~~~~~g~~~~~~~~~~--~~ll~~~~~l~~ig~-g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~ 156 (489)
T PRK10207 80 TKRTIVLGAIVLAIGYFMTGMSLLK--PDLIFIALGTIAVGN-GLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGS 156 (489)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhccc--hhHHHHHHHHHHhcc-ccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHH
Confidence 9999999999999999999988762 123457899999755 777788999999999876 45778999999999999
Q ss_pred hHHHHhhHh----hhhHHHHHHHHHHHHHHHHHHHHHcccCCCCCC--C-C--CCCCCcccc---------cccccCCCC
Q 011514 158 VCGTLAARF----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDD--D-D--DLTRPIITE---------ETEGVNQNE 219 (484)
Q Consensus 158 ~ig~~l~~~----l~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~--~-~--~~~~~~~~~---------~~~~~~~~~ 219 (484)
.+||.+++. +|||+.|++.++ ..+..++.+...++..++.+ . + .|.++.... ......+..
T Consensus 157 ~~g~~l~g~l~~~~gw~~~F~i~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~ 235 (489)
T PRK10207 157 LISLSLAPVIADKFGYSVTYNLCGA-GLIIALLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHNV 235 (489)
T ss_pred HHHHHHHHHHHHhhChHHHHHHHHH-HHHHHHHHHHHcchhhcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhh
Confidence 998888776 589999998764 44444444443443221111 0 0 010010000 000000000
Q ss_pred CCCCcc------------CcccCCCCchHHHHHHhhccchhHHHHH--HHHHHhchhhhhHHHHHHHHhhhcCcCh----
Q 011514 220 SNSPVK------------IPVCKKIPSIRDLICLLRSSVTLSQAAV--VAFFSGLSEGGMQASFLYFLKAQFHFNK---- 281 (484)
Q Consensus 220 ~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~---- 281 (484)
+..... ...+++. + ...|+|.+....+ ...+++..+......++.|.++..+.+.
T Consensus 236 ~~~~~~~~~~~~i~~~~f~~~~~~~-~------~~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~ 308 (489)
T PRK10207 236 EVANLVLIVLSIVVTIIFFREAFKL-D------KTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFS 308 (489)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhcC-C------HHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhccccccceE
Confidence 000000 0000000 0 1223344333322 2344445555555677777775333221
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchH-------HHHHhHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHh
Q 011514 282 NQFADLMLIAGLAGTISQLLFMPLLAPILGEAK-------LLSLGLFAACINMFICSISWSAWVIKIFFNKVFKLLLLSF 354 (484)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 354 (484)
...+.+.+...+..++.. .+.+++.||+++|+ .+.+|+.+.+++++.+........
T Consensus 309 i~~~~~~~~n~~~iii~~-pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~---------------- 371 (489)
T PRK10207 309 INPVSFQALNPFWVVVAS-PILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFA---------------- 371 (489)
T ss_pred ECHHHHHhHhHHHHHHHH-HHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhc----------------
Confidence 112445555556666676 44578999998886 366777777766654321100000
Q ss_pred hhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 011514 355 ITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPL 433 (484)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l 433 (484)
-.++..++|+ +.....+.+++.....|...+.+.+..|++.+|.++|+.+...++|+.+|..+.+..
T Consensus 372 ~~~~~~s~~~------------~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~ 438 (489)
T PRK10207 372 DAQGLTSPWF------------IVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFT 438 (489)
T ss_pred CCCCccCHHH------------HHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0000111221 144555889999999999999999999999999999999999999999988877654
No 86
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.95 E-value=9.3e-24 Score=204.87 Aligned_cols=354 Identities=20% Similarity=0.231 Sum_probs=259.1
Q ss_pred HHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccC-chhHhHHHHHHH
Q 011514 13 LFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYG-RKAMLTLPLTLS 91 (484)
Q Consensus 13 l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~G-rk~~l~~~~~~~ 91 (484)
+....|+..+..+...|.++.+.++. +.+..++|.+.++..+..+++++++|.++||++ +||.+.+..++.
T Consensus 7 Ls~~~f~~f~~~G~~~p~~~~~L~~~--------G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~ 78 (400)
T PF03825_consen 7 LSLMYFLYFFAYGAFLPYLPLYLESR--------GFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLS 78 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHH
Confidence 45556777778889999999999876 566678899999999999999999999999986 577887888888
Q ss_pred HHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHh-----hHh
Q 011514 92 IIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLA-----ARF 166 (484)
Q Consensus 92 ~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l-----~~~ 166 (484)
++........++ ++.+++.-++..++. ....|...++..+..+ +++.-.|......++|.+++... .+.
T Consensus 79 ~~~~~~~~~~~~---f~~~~~~~~l~~~~~-~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~ 152 (400)
T PF03825_consen 79 ALALLLLAFSSS---FWWLFVIMLLFSFFF-SPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGY 152 (400)
T ss_pred HHHHHHHHHhcc---HHHHHHHHHHHHHHH-ccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhh
Confidence 887777777788 666677776767544 5566788888888775 44555666777777777666432 222
Q ss_pred hhh---HHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHHHHHHhh
Q 011514 167 LST---TSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLR 243 (484)
Q Consensus 167 l~~---~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (484)
.++ ...+++.+...++..... +.+|+.|+++++++ ..+....++.++ +.
T Consensus 153 ~~~~~~~~~~~i~~~~~~ll~~~~-l~lp~~~~~~~~~~--------------------------~~~~~~~~~~~~-ll 204 (400)
T PF03825_consen 153 LGISGTSLIFYIAAILSLLLAGFA-LFLPKTPPKRSAKE--------------------------SVKKLLGLDALK-LL 204 (400)
T ss_pred hccccccHHHHHHHHHHHHHHHHH-HhCCCCccccccCC--------------------------CcccccchHHHH-Hh
Confidence 222 245555554444433333 44787763332220 001112223333 56
Q ss_pred ccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHH
Q 011514 244 SSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAA 323 (484)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~ 323 (484)
|+|++....+..++.......++++.+.|+++.-|.+....+...+...+..++.. ...+++.+|+|.++++.++....
T Consensus 205 k~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f-~~~~~~~~r~g~~~ll~~a~~~~ 283 (400)
T PF03825_consen 205 KNPRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFF-FFSGRFLKRFGIKWLLLLALVAY 283 (400)
T ss_pred cCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHH-HHHHHHHHhcCHHHHHHHHHHHH
Confidence 77888888888899998999999999999999844777777877777666666665 77899999999999999999999
Q ss_pred HHHHHHHhhcc-chhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcc
Q 011514 324 CINMFICSISW-SAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQ 402 (484)
Q Consensus 324 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 402 (484)
++-..+++... +.+.. +++ ......+.|...+........++.+.
T Consensus 284 ~vR~~l~a~~~~~~~~~----------------------~~~------------~~l~q~lhG~tf~~~~~a~~~yi~~~ 329 (400)
T PF03825_consen 284 AVRWLLYAYFSDPWPFI----------------------VAL------------QLLGQLLHGLTFGLFHAASVRYIDRI 329 (400)
T ss_pred HHHHHHHHHhcCCcHHH----------------------HHH------------HHHHHhhhhHHHHHHHHHHHHHHHHh
Confidence 99999988873 33330 000 01122357888899999999999999
Q ss_pred cCCCchhHHHHHHHHH-HHHHHHHHHHHHHHHHHhhhcCCCCc
Q 011514 403 VGPNEQGKAQGCISGI-SSFANIVSPLIFSPLTALFLSKGAPF 444 (484)
Q Consensus 403 ~p~~~~g~~~g~~~~~-~~lg~~~gp~i~g~l~~~~~~~~~~~ 444 (484)
+|++.|++++++++.. ..+|..+|..++|+++|+. +.+..+
T Consensus 330 ~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~-g~~~~~ 371 (400)
T PF03825_consen 330 APPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAF-GARGMF 371 (400)
T ss_pred CCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHh-cchhhh
Confidence 9999999999998876 6799999999999999997 555433
No 87
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.94 E-value=3e-23 Score=203.63 Aligned_cols=415 Identities=13% Similarity=0.094 Sum_probs=279.2
Q ss_pred HHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhccc----ccCchhHh
Q 011514 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSD----QYGRKAML 84 (484)
Q Consensus 9 ~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~D----r~Grk~~l 84 (484)
.+..+....+-..++.....+.++.|.++. +.+..+.+++..+..+..++.+|+.|.++| |+||||.+
T Consensus 5 ~li~~~~~~~Giq~~~~l~~~~l~~yl~~l--------g~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~ 76 (477)
T TIGR01301 5 KLLRVASVAAGVQFGWALQLSLLTPYVQEL--------GIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPF 76 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--------CCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHH
Confidence 445556666666788889999999988765 455577899999999999999999999999 59999988
Q ss_pred HH-HHHHHHHHHHHHHhccchhh--------------HHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccch--hHHHH
Q 011514 85 TL-PLTLSIIPLAILAYRRSISF--------------FYAYYALRTLTAMVCEGSINCLALAYVADNISERQR--ASAFG 147 (484)
Q Consensus 85 ~~-~~~~~~i~~~~~~~~~~~~~--------------~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r--~~~~~ 147 (484)
+. +.....++..+++++++... .+...++-.+..++. ....+...++++|.+|+++| +.+++
T Consensus 77 il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~-n~~~~p~rALiaDl~p~~~~~~~~a~~ 155 (477)
T TIGR01301 77 IAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVAN-NMLQGPCRAFLADLTGGDARRTRIANA 155 (477)
T ss_pred HHHHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHH-HHHHHHHHHhcccccCchhHHHHHHHH
Confidence 76 46777777788888766210 012222222333233 44556789999999998765 57999
Q ss_pred HHHHHHHhHHhHHHHhhHhh-------------------hhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcc
Q 011514 148 ILLGVLSASFVCGTLAARFL-------------------STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPII 208 (484)
Q Consensus 148 ~~~~~~~~g~~ig~~l~~~l-------------------~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~ 208 (484)
+.+...++|.++|+.+++.. +.|..|++.+++.++..+...+..||.+..++++.+.+
T Consensus 156 ~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~--- 232 (477)
T TIGR01301 156 YFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFINS--- 232 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchhh---
Confidence 99999999999999988753 34778999998888888888888999765332210000
Q ss_pred cccccccCCCCCCCCccCcccCCCCchHHHHHHhhc-cchhHHHHHHHHHHhchhhhhHHHHHHHHh-hhcCcChhh---
Q 011514 209 TEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRS-SVTLSQAAVVAFFSGLSEGGMQASFLYFLK-AQFHFNKNQ--- 283 (484)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~--- 283 (484)
+. + +. +..+....+++.++.+++ +|.++.+++..++.+++...+..+.+.|+. +.++-++.+
T Consensus 233 -----~~---~--~~---~~~~~~~~~~~i~~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~ 299 (477)
T TIGR01301 233 -----EA---A--PP---SKHGEEAFFGELFGAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAK 299 (477)
T ss_pred -----hc---c--cc---cccchhhhHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhH
Confidence 00 0 00 000111234555555443 577889999999999999988888887765 455543321
Q ss_pred -------HHHHHHHHHHHHHHHHHHHHHHhhhhhcc-hHHHHHhHHHHHHHHHHHhhccchhh-HHHhhhhHHHHHHHHh
Q 011514 284 -------FADLMLIAGLAGTISQLLFMPLLAPILGE-AKLLSLGLFAACINMFICSISWSAWV-IKIFFNKVFKLLLLSF 354 (484)
Q Consensus 284 -------~~~~~~~~~~~~~~~~~~~~~~l~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~f 354 (484)
-.+.....++...+.+ ++..++.+|+|+ |+....+.++.++++....+...... .+..+.+ . ..
T Consensus 300 y~~gvr~G~~~l~~~s~~~~i~s-~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~---~--~~- 372 (477)
T TIGR01301 300 YDDGVRAGAFGLMLNSVVLGITS-IGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGD---G--ES- 372 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhcccccccc---c--cc-
Confidence 1233344445555555 566899999985 66768888888777777664432000 0000000 0 00
Q ss_pred hhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCC--CchhHHHHHHHHHHHHHHHHHHHHHHH
Q 011514 355 ITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGP--NEQGKAQGCISGISSFANIVSPLIFSP 432 (484)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~--~~~g~~~g~~~~~~~lg~~~gp~i~g~ 432 (484)
..+...+.. .++....+.|+..+..+..-++++++..|+ +..|..+|+.|.+..+.+.+.....|.
T Consensus 373 -~~~~~~~~~-----------~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~ 440 (477)
T TIGR01301 373 -LPPPTGIKA-----------SALIVFAILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGP 440 (477)
T ss_pred -cCcchhhHH-----------HHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHH
Confidence 000000000 024555688899999999999999999995 566999999999999999999999999
Q ss_pred HHHhhhcCCCCcccCchHHHHHHHHHHHHHHHHHHhccCCC
Q 011514 433 LTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSHTPA 473 (484)
Q Consensus 433 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (484)
+.+.. +.+... .+.+.++..+++.+..+++-++++
T Consensus 441 ~~~~~-g~~~~~-----~~~~~gv~~~~aa~~~~~~~~~~~ 475 (477)
T TIGR01301 441 WDQLF-GGGNLP-----AFVVGAVAAFVSGLLALILLPRPR 475 (477)
T ss_pred HHHHc-CCCCee-----HHHHHHHHHHHHHHHHHHhCCCCC
Confidence 77776 433333 678888888888887777665554
No 88
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.94 E-value=4.4e-26 Score=212.04 Aligned_cols=422 Identities=14% Similarity=0.091 Sum_probs=283.9
Q ss_pred HHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHH
Q 011514 11 SHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTL 90 (484)
Q Consensus 11 ~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~ 90 (484)
.+.-++.|.+.++...+.++.|.+...+.+...+.-+.+.-..+.+..+..+|.+++++++|+++||+|||+++...+++
T Consensus 44 ~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liI 123 (538)
T KOG0252|consen 44 IIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELII 123 (538)
T ss_pred HHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHH
Confidence 33345667888888888878777766654322222345666778999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccch----hhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHh
Q 011514 91 SIIPLAILAYRRSI----SFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF 166 (484)
Q Consensus 91 ~~i~~~~~~~~~~~----~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~ 166 (484)
..+++++++++... ...+++.+.|++.|++. |.-+|...+..+|...+++||...+...+..+.|.+.|..++-.
T Consensus 124 mIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGI-GGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~I 202 (538)
T KOG0252|consen 124 MIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGI-GGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALI 202 (538)
T ss_pred HHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccc-cCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHH
Confidence 99999988876442 45689999999999877 77779999999999999999999999888888888877765533
Q ss_pred -------------------hhhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCccccccccc-C-CCCCCCCcc
Q 011514 167 -------------------LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGV-N-QNESNSPVK 225 (484)
Q Consensus 167 -------------------l~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~ 225 (484)
.-||..+.+.++.+ +..+.....+||+++.+...++..+.-..+..+. . +.+++++..
T Consensus 203 v~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa-~~~ly~Rl~M~Et~~Y~al~~~~~~~a~~d~~k~~~~~~~~~~~~~ 281 (538)
T KOG0252|consen 203 VSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPA-LLVLYFRLKMPETARYTALVSKKLKQAAGDMKKVLSVDIEAESTAE 281 (538)
T ss_pred HHHHHhccCCCCCCchHHHHHHHHHHHHHHHHH-HHHHHhhhcCCcchhHHHHhhcCHhhhhhccccccccccchhhccc
Confidence 14999998888554 4445556679999876522111100000000000 0 000000111
Q ss_pred CcccCCCCchHHHHHHhh--ccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHH--------HHHHHHHHH
Q 011514 226 IPVCKKIPSIRDLICLLR--SSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFAD--------LMLIAGLAG 295 (484)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--------~~~~~~~~~ 295 (484)
.......++.+...+.+. +-+.+.......|+...+++....+....++.. |+.+.+... ...+....+
T Consensus 282 ~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~i-g~~~~~~~~~~~~~vA~~~~iia~~~ 360 (538)
T KOG0252|consen 282 SDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSAI-GVIPSANTYHELFKVAEGNLIIAVCS 360 (538)
T ss_pred cCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccHHHHHHHhh-ccCCCcchHHHHHHHHHHHHHHHHHc
Confidence 111111112222222222 236677778888888888888777777766654 665544322 222333333
Q ss_pred HHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhcc
Q 011514 296 TISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFM 375 (484)
Q Consensus 296 ~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 375 (484)
.+....+...++|++||+++.+.++.++.+..+.++...+... ....
T Consensus 361 ~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~~~---------------------------------~~~G 407 (538)
T KOG0252|consen 361 TVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQLE---------------------------------NTIG 407 (538)
T ss_pred cCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCccccc---------------------------------ccCc
Confidence 3322244567899999999999999999999888887765211 0000
Q ss_pred chhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCchHHHHHH
Q 011514 376 QVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIG 455 (484)
Q Consensus 376 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~~~~~~~~~~~~~~ 455 (484)
..+...+...++....+.....+.+|.+|.+.||+..|+....+..|+++|...++++.++- ..+....+-.+++.+
T Consensus 408 f~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~---yp~~~g~~~v~~i~~ 484 (538)
T KOG0252|consen 408 FVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHN---YPPNIGVRNVFIILA 484 (538)
T ss_pred eeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhcc---CCccccchHHHHHHH
Confidence 01222223334455556666678889999999999999999999999999999999988852 122233444778888
Q ss_pred HHHHHHHHHHHHhccC
Q 011514 456 LASMVAFIQSLMMSHT 471 (484)
Q Consensus 456 ~~~~~~~~~~~~~~~~ 471 (484)
.+.+++.+..+.+++.
T Consensus 485 ~~~~~gi~~T~l~pEt 500 (538)
T KOG0252|consen 485 GCMLLGILFTLLIPET 500 (538)
T ss_pred HHHHHhHheeEEeecc
Confidence 8888877777766643
No 89
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.94 E-value=7.4e-23 Score=202.26 Aligned_cols=354 Identities=14% Similarity=0.129 Sum_probs=262.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHh-HHHHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHh
Q 011514 50 IYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAML-TLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCL 128 (484)
Q Consensus 50 ~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l-~~~~~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~ 128 (484)
....++..++..+...+..|+.|.++|+-|+||.+ .....+..+++.++.+.+.. .++...+.-++.-++. +.....
T Consensus 69 ~s~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~-~~~~~~~l~iia~v~~-~~~~vf 146 (477)
T PF11700_consen 69 SSLWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPG-QWWLALVLFIIANVGY-EASNVF 146 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcc-hHHHHHHHHHHHHHHH-HHHHHH
Confidence 34567889999999999999999999999876654 45556666677777765221 1333333333333322 444567
Q ss_pred hhHHHhhcCCccch--------------------------hHHHHHHHHHHHhHHhHHHHhhHh------------hhhH
Q 011514 129 ALAYVADNISERQR--------------------------ASAFGILLGVLSASFVCGTLAARF------------LSTT 170 (484)
Q Consensus 129 ~~~~i~~~~~~~~r--------------------------~~~~~~~~~~~~~g~~ig~~l~~~------------l~~~ 170 (484)
.++++.|..+++++ ++..+.-.+...+|.++.-.+.-. .+-|
T Consensus 147 yna~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r 226 (477)
T PF11700_consen 147 YNAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIR 226 (477)
T ss_pred HHHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhh
Confidence 89999999998888 888888777777877665544322 1248
Q ss_pred HHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHHHHHHhhccchhHH
Q 011514 171 SAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQ 250 (484)
Q Consensus 171 ~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (484)
..+.+.++..++..+...+++||.|+.++.+. .........++.++.++..++.|.+..
T Consensus 227 ~~~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~---------------------~~~~~~~g~~~l~~t~k~~~~~~~~~~ 285 (477)
T PF11700_consen 227 VAFLIVALWWLVFSIPLFLWLPDRPGPRPLPS---------------------GSSYLRFGFKRLWRTFKEIRKLRQLFL 285 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCc---------------------chhHHHHHHHHHHHHHHHHHhChHHHH
Confidence 88889998888888888888998876322210 000001112244555667788899999
Q ss_pred HHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcch--HHHHHhHHHHHHHHH
Q 011514 251 AAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEA--KLLSLGLFAACINMF 328 (484)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~--~~~~~~~~~~~~~~~ 328 (484)
.++..+++.-+......+...|.++.+|++..+...+.....+.++++. ++.+++.||+|.| +++..+.....+..+
T Consensus 286 fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga-~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~ 364 (477)
T PF11700_consen 286 FLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGA-LLFGWLQDRFGPKTKRTLLISLILWIIIPL 364 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCchhHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999 7779999999998 777777666533333
Q ss_pred HHhh--------ccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHh
Q 011514 329 ICSI--------SWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVS 400 (484)
Q Consensus 329 ~~~~--------~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 400 (484)
.-.+ ..+.+. ..+...+.|+..+...+..+++.+
T Consensus 365 ~g~~G~~~~~~g~~~~~~--------------------------------------f~~~a~~~G~~~G~~qs~sRs~~~ 406 (477)
T PF11700_consen 365 YGLFGFWPSFFGLKSPWE--------------------------------------FWVLAVLIGLFMGGIQSASRSLFS 406 (477)
T ss_pred HHHHHhhhcccCcccHHH--------------------------------------HHHHHHHHHHHhhhHHHHHHHHHH
Confidence 2222 233333 245566889999999999999999
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHHHHHHhccCC
Q 011514 401 KQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSHTP 472 (484)
Q Consensus 401 ~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (484)
+..|+++.++.+|++...+...+.+||.+.|.+.+.+++.+. .+....++.++++++..+.+.++
T Consensus 407 ~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~-------g~~~l~~lf~~gl~ll~~v~~~~ 471 (477)
T PF11700_consen 407 RLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRY-------GFLFLLVLFLIGLILLFFVDVEK 471 (477)
T ss_pred HhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchh-------HHHHHHHHHHHHHHHHhhccchh
Confidence 999999999999999999999999999999999999855555 34555566666666666555444
No 90
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.93 E-value=4.6e-24 Score=216.31 Aligned_cols=352 Identities=17% Similarity=0.129 Sum_probs=238.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhh
Q 011514 51 YLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLAL 130 (484)
Q Consensus 51 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~ 130 (484)
.+.+++.+...++..+++++.|+++|++|||+.++++.+.+.++.+++++++| +++++++|++.|++. |.......
T Consensus 89 ~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~---~~~l~~GR~l~G~g~-G~~~~~~p 164 (513)
T KOG0254|consen 89 VRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPS---WYQLIVGRILTGLGV-GGASVLAP 164 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhh---HHHHHHHHHHhccch-hhhhhcch
Confidence 35689999999999999999999999999999999999999999999999999 999999999999866 66667899
Q ss_pred HHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHhh-----hhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCC
Q 011514 131 AYVADNISERQRASAFGILLGVLSASFVCGTLAARFL-----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTR 205 (484)
Q Consensus 131 ~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l-----~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~ 205 (484)
.|++|..|++.||...+..+....+|..+|..++... +||.++.+..+.+++..+. .+++||+|++..++++.+
T Consensus 165 iy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pesp~~L~~~g~~~ 243 (513)
T KOG0254|consen 165 VYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPESPRWLIEKGRLE 243 (513)
T ss_pred hhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCCChHHHHHcCChH
Confidence 9999999999999999999999999999997777665 7999999988777777666 778999998765543333
Q ss_pred CcccccccccCCCCCCCCc-----c-----CcccCCCC-chHHHHHHhhccchhHHHHHHHHHHhchhhhhHHHHHHHHh
Q 011514 206 PIITEETEGVNQNESNSPV-----K-----IPVCKKIP-SIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLK 274 (484)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~-----~-----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (484)
++......-....+++... . +......+ ..++.++...+++......+..+....+......+.+.+++
T Consensus 244 ~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~ 323 (513)
T KOG0254|consen 244 EAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFK 323 (513)
T ss_pred HHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHH
Confidence 3322211111100000000 0 00000001 12222221111223333444444444444556666677666
Q ss_pred hhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHh
Q 011514 275 AQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVIKIFFNKVFKLLLLSF 354 (484)
Q Consensus 275 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 354 (484)
.. |.+... .......+....++. +++..+.||+|||+.++.+...+.++.++++........
T Consensus 324 ~~-g~~~~~-~~~~~~~~~v~~~~t-~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~--------------- 385 (513)
T KOG0254|consen 324 SA-GLKSDT-FLASIILGVVNFLGT-LVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALY--------------- 385 (513)
T ss_pred hc-CCCCch-HHHHHHHHHHHHHHH-HHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhcc---------------
Confidence 65 666443 334444555555665 665899999999999999999999988877654322110
Q ss_pred hhh-hhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 011514 355 ITR-KQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPL 433 (484)
Q Consensus 355 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l 433 (484)
+. ......... +...+...........|..+.+.+|.+|.+.|+++.++...++...+.+-......+
T Consensus 386 -~~~~~~~~~~~~----------~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~ 454 (513)
T KOG0254|consen 386 -YPNSSKGAGWLA----------IVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFI 454 (513)
T ss_pred -CCCcccchhHHH----------HHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 000000000 022222333344445666778889999999999999999999998887766655555
Q ss_pred HHh
Q 011514 434 TAL 436 (484)
Q Consensus 434 ~~~ 436 (484)
.+.
T Consensus 455 ~~~ 457 (513)
T KOG0254|consen 455 TEA 457 (513)
T ss_pred HHh
Confidence 544
No 91
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.93 E-value=1.4e-22 Score=192.79 Aligned_cols=386 Identities=15% Similarity=0.126 Sum_probs=260.3
Q ss_pred chhhHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHh
Q 011514 5 KEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAML 84 (484)
Q Consensus 5 ~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l 84 (484)
.++++.+.+....++..+..+...|.+|..+++.. +++.+++|.+.++..+..++.+|+.|.++||.|.||-+
T Consensus 4 ~~~~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~-------GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~L 76 (412)
T PF01306_consen 4 FKNKNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVA-------GLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHL 76 (412)
T ss_dssp CHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHH
T ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHcccc-------CCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHH
Confidence 34667788888888888999999999999998643 77888999999999999999999999999999976654
Q ss_pred HHHHH--H-HHHHHHHHHhccch--hhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhH
Q 011514 85 TLPLT--L-SIIPLAILAYRRSI--SFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVC 159 (484)
Q Consensus 85 ~~~~~--~-~~i~~~~~~~~~~~--~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~i 159 (484)
+.... . .........+.+-. +.+...+++-+..|+.. ....|+..+++.+.. ++.+.-.|-.....++|.++
T Consensus 77 l~~i~~l~~l~~pff~~v~~pll~~n~~lg~iig~i~l~~~f-~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai 153 (412)
T PF01306_consen 77 LWFIAILLLLFGPFFIYVFGPLLQSNFWLGAIIGGIYLGLVF-NAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAI 153 (412)
T ss_dssp HHHHHHHHHTCHHHHHHTHHHHHHTT-HHHHHHTTTTTTTTT-TTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHH
Confidence 43322 2 22223332332210 11223333344445433 333467777777765 45566778888899999999
Q ss_pred HHHhhHhh---hhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchH
Q 011514 160 GTLAARFL---STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIR 236 (484)
Q Consensus 160 g~~l~~~l---~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (484)
+..++|.+ +-+..||+.....++..++..+..|+.+++.+..+ ....+++..+.+
T Consensus 154 ~s~~~G~L~~i~p~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~ 211 (412)
T PF01306_consen 154 ASLLAGILFNINPNIIFWIASAAAIILLLLLLLLKPDVPPQAEVAD----------------------ALGAKKDKVSLK 211 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS---SSSSS-SST----------------------TSSS------HH
T ss_pred HHHHhheeeeeCccHHHHHHHHHHHHHHHHHHHcCCcCchhhhhhc----------------------ccccCCCCCcHH
Confidence 99998874 34667887765555555444443344333222110 001112222455
Q ss_pred HHHHHhhccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhc---CcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcch
Q 011514 237 DLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQF---HFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEA 313 (484)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~ 313 (484)
+..+ +.|+|++|.+.+........+..+....+.|.+..+ +.+....|++.+...+...+.. .+.+++.+|+|.|
T Consensus 212 ~~~~-l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m-~~~p~li~rig~k 289 (412)
T PF01306_consen 212 DVLS-LFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMM-FFSPWLINRIGAK 289 (412)
T ss_dssp HHHH-HTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH-HH
T ss_pred HHHH-HhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHH-HHHHHHHHhcChH
Confidence 5443 567789988887777766677777766777776653 3344557888887777777776 7789999999999
Q ss_pred HHHHHhHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhh
Q 011514 314 KLLSLGLFAACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATP 393 (484)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 393 (484)
+.++++..++.+-....++.++.+. +...-.+.++-.+....
T Consensus 290 ~~Lllag~i~~iRi~~~~~~~~~~~--------------------------------------i~~~klLH~~e~~l~lv 331 (412)
T PF01306_consen 290 NLLLLAGVIMAIRIIGSGFATNPWV--------------------------------------ISLIKLLHALEFPLLLV 331 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHT--SHHH--------------------------------------HHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhhhcchHH--------------------------------------HHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998887 24455577888888888
Q ss_pred HHHHHHhcccCCCchhHHHHHH-HHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHHHHHHhcc
Q 011514 394 SFRSIVSKQVGPNEQGKAQGCI-SGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSH 470 (484)
Q Consensus 394 ~~~~~~~~~~p~~~~g~~~g~~-~~~~~lg~~~gp~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (484)
...-++++..|++..++.+.+. +...+++..+.+.+.|.++|+. |.+. .|.+.+.+.+...+...+..+
T Consensus 332 a~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~-G~~~-------tylimg~iv~~~~li~~f~l~ 401 (412)
T PF01306_consen 332 AAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRI-GFQH-------TYLIMGLIVLPFTLISAFTLK 401 (412)
T ss_dssp HHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHH-HHHH-------HHHHHHHHHHHHHHHHHHHS-
T ss_pred HHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhc-CcHH-------HHHHHHHHHHHHHHHheeeec
Confidence 8889999999999999999885 6888999999999999999998 5443 445655555554444444333
No 92
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.93 E-value=1.2e-23 Score=209.10 Aligned_cols=363 Identities=16% Similarity=0.155 Sum_probs=268.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHHHHHHHHHHHhccchhhHHHHHH-HHHHhhhhccchhhHhh
Q 011514 51 YLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYA-LRTLTAMVCEGSINCLA 129 (484)
Q Consensus 51 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~i~~~~~~~~~~~~~~~~l~~-~r~l~G~~~~g~~~~~~ 129 (484)
.+++|+.++......+.+|+.+.+.||+|.|++.+.|.++..++.++..++++ +|.+++ .-++.|++. +......
T Consensus 81 ~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~---i~~l~lt~gvi~G~G~-~~~~~pa 156 (509)
T KOG2504|consen 81 SQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFATS---LWQLYLTFGVIGGLGL-GLIYLPA 156 (509)
T ss_pred cHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhh---HHHHHHHHHHHhhccc-hhhhcch
Confidence 34689999999999999999999999999999999999999999999999999 666555 456777655 6665567
Q ss_pred hHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHh----hhhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCC-CC
Q 011514 130 LAYVADNISERQRASAFGILLGVLSASFVCGTLAARF----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDD-LT 204 (484)
Q Consensus 130 ~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~----l~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~-~~ 204 (484)
...+..++ +++|+.+.|+...+.++|.++-|.+... .|||+.+++.+.+.+-........-|.+++.++.+. +.
T Consensus 157 iviv~~YF-~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~~~~~~ 235 (509)
T KOG2504|consen 157 VVILGTYF-EKKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRPLSPPKKPNEEKDL 235 (509)
T ss_pred hhhhhhHh-HHHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCchhhhhh
Confidence 77777666 5899999999999999998877766654 599999999888876666666665554433322100 00
Q ss_pred CC------------cccccccccCCCC---CCCCc--cCcccCCCCchHHHH----HHhhccchhHHHHHHHHHHhchhh
Q 011514 205 RP------------IITEETEGVNQNE---SNSPV--KIPVCKKIPSIRDLI----CLLRSSVTLSQAAVVAFFSGLSEG 263 (484)
Q Consensus 205 ~~------------~~~~~~~~~~~~~---~~~~~--~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 263 (484)
+. ......+.....+ .+.+. +.+.+....+.+... ..+.++|.++...+...+...++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~ 315 (509)
T KOG2504|consen 236 RNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFN 315 (509)
T ss_pred ccccccccccccccccccccCCCCCCcccccchhhhhhCCccccccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHH
Confidence 00 0000000000000 00000 000000000111111 235677899999999999999999
Q ss_pred hhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhc--chHHHHHhHHHHHHHHHHHhhccchhhHHH
Q 011514 264 GMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILG--EAKLLSLGLFAACINMFICSISWSAWVIKI 341 (484)
Q Consensus 264 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (484)
....++|.|..+ .|++..+.+.++++.++..+++. ++.|++.|+.. ++....++.+..+++....++.++.+.
T Consensus 316 ~p~~~l~~~~~~-~g~~~~~aa~l~Siigi~~i~gR-i~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~~--- 390 (509)
T KOG2504|consen 316 VPFVYLPSYAKS-LGLSSNDAAFLLSIIGVSDIIGR-IILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATTYVG--- 390 (509)
T ss_pred HHHHHHHHHHhh-cCCChhhhHHHHHHHHHhhhhhh-hhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhccHHH---
Confidence 999999999995 49999999999999999999999 66699999876 455667777777777777777777665
Q ss_pred hhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHH
Q 011514 342 FFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSF 421 (484)
Q Consensus 342 ~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~l 421 (484)
+.....++|+..+.........+.+.++.++-..++|+...++.+
T Consensus 391 -----------------------------------l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi 435 (509)
T KOG2504|consen 391 -----------------------------------LIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGI 435 (509)
T ss_pred -----------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHH
Confidence 356666888888888887778999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCcccCchHHHHHHHHH
Q 011514 422 ANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLAS 458 (484)
Q Consensus 422 g~~~gp~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (484)
+..+||++.|.+.|.++++...++..+....+.+.+.
T Consensus 436 ~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~ 472 (509)
T KOG2504|consen 436 GALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLL 472 (509)
T ss_pred HHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHH
Confidence 9999999999999998778887766665555444333
No 93
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.93 E-value=7e-24 Score=208.41 Aligned_cols=276 Identities=16% Similarity=0.054 Sum_probs=211.6
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccc
Q 011514 44 DECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEG 123 (484)
Q Consensus 44 ~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g 123 (484)
+|.+....+.|.+.+++.++++++.++.|.+.||++-.+.+....+..++-.++....+| ++.+++.|++.|++- +
T Consensus 74 edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s---~~~~ialr~llGl~e-s 149 (495)
T KOG2533|consen 74 EDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHS---FPGLIALRFLLGLFE-S 149 (495)
T ss_pred cccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhh---hHHHHHHHHHHHHHh-c
Confidence 344556667899999999999999999999999999888888888888888877777888 899999999999865 6
Q ss_pred hhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHh----------hhhHHHHHHHHHHHHHHHHHHHHHccc
Q 011514 124 SINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF----------LSTTSAFQAATIVSMLAAAYMRVFLKD 193 (484)
Q Consensus 124 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~----------l~~~~~f~~~~~~~~i~~~~~~~~lpe 193 (484)
...|....+++.|+.+++|+..++++.+..++|.++|++++.. .|||+.|++.+++.++..+++++++|+
T Consensus 150 ~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~ 229 (495)
T KOG2533|consen 150 GGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPD 229 (495)
T ss_pred ccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecC
Confidence 6779999999999999999999999999999999999988754 389999999999999999999999999
Q ss_pred CCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHHHHHHhhccchhHHHHHHHHHHhchhhhhHHHHHHHH
Q 011514 194 DVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFL 273 (484)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (484)
.|.+..-.+++++....++.+.++. ... .++ .+.+ .++...++|.+|...++.++.....+++.+++|.|+
T Consensus 230 ~P~~~~fl~~~ek~~~~~~~~~~~~------~~~-~~~-~~~~-~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l 300 (495)
T KOG2533|consen 230 NPSKAWFLTDEEKELVVERLRESPS------GGI-ENK-FKWK-GFKEALKDPGVWPFSLCYFFLKLVNYGFSYWLPLYL 300 (495)
T ss_pred ChhhccccchHHHHHHHHHHHhccC------CCc-ccc-cCHH-HHHHHHhchhHHHHHHHHHHHhhccccHHHHHHHHH
Confidence 9875422111100000000000000 000 000 1222 233466789999999999999999999999999999
Q ss_pred hhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhh----hcchHHHHHhHHH-HHHHHHHHhhc
Q 011514 274 KAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPI----LGEAKLLSLGLFA-ACINMFICSIS 333 (484)
Q Consensus 274 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~g~~~~~~~~~~~-~~~~~~~~~~~ 333 (484)
++..|++..+...+.....++++++. ++++.++|| ..+|........+ ..++...+...
T Consensus 301 ~~~~~~s~~~a~~ls~~~~~~g~v~~-i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g~~~l~~~ 364 (495)
T KOG2533|consen 301 KSNGGYSELQANLLSTPYDVGGIVGL-ILAGYLSDRLKTIFARRLLFIVFLCLYAIIGAISLLAA 364 (495)
T ss_pred HcCCCcChHHhccccchHHhhhHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99667999999999999999999998 777999999 4445444444433 33443444333
No 94
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.93 E-value=2.2e-22 Score=202.21 Aligned_cols=355 Identities=11% Similarity=0.059 Sum_probs=246.2
Q ss_pred HHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhccc----ccCc-hhHhHHH
Q 011514 13 LFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSD----QYGR-KAMLTLP 87 (484)
Q Consensus 13 l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~D----r~Gr-k~~l~~~ 87 (484)
.-++.+...+..+...+.++.|.++.. ++++...|.+..+..+..++..|++|.++| |+|| |+.++.+
T Consensus 11 yg~g~~~~~~~~~~~~~~l~~yyt~v~-------Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g 83 (473)
T PRK10429 11 YGFGAFGKDFAIGIVYMYLMYYYTDVV-------GLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIG 83 (473)
T ss_pred hccchhHHhHHHHHHHHHHHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhh
Confidence 345556667777778888888887654 677788999999999999999999999999 5698 5566678
Q ss_pred HHHHHHHHHHHHhccch---hhHHHHHHHHHHhhhhccchhhHhhhHHHhhcC-CccchhHHHHHHHHHHHhHHhHHHHh
Q 011514 88 LTLSIIPLAILAYRRSI---SFFYAYYALRTLTAMVCEGSINCLALAYVADNI-SERQRASAFGILLGVLSASFVCGTLA 163 (484)
Q Consensus 88 ~~~~~i~~~~~~~~~~~---~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~ig~~l 163 (484)
....+++..++...++. ..++.+++..++.+++. ........++.+|.+ +++||.+..++.....++|..+++.+
T Consensus 84 ~i~~~i~~~llf~~p~~~~~~~~~~~~~~~~l~~~~~-t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~ 162 (473)
T PRK10429 84 TLANSVVLFLLFSAHLFEGTAQYVFVCVTYILWGMTY-TIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGF 162 (473)
T ss_pred hHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHHHH-HHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888887666554422 12344555555656544 445556888999999 58999999998777777765554433
Q ss_pred hHh-----------hhhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCC
Q 011514 164 ARF-----------LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKI 232 (484)
Q Consensus 164 ~~~-----------l~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (484)
... .+|+....+.+++..+..+..++..||.++.++.+ ..++++
T Consensus 163 ~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~~~~~~~-------------------------~~~~~~ 217 (473)
T PRK10429 163 TLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEVYSSDNQV-------------------------SAEGSH 217 (473)
T ss_pred HHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCceecCCccccc-------------------------cccccC
Confidence 221 24555555666555555555555566643221110 001122
Q ss_pred CchHHHHHHhhccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcc
Q 011514 233 PSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGE 312 (484)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~ 312 (484)
.+.++.++.+++||.++..+...++..........+.++|.+...+ ++...+.+....++..+++. ++.+++.||+|+
T Consensus 218 ~~~~~~~~~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~-~~~~~~~~~~~~~i~~ii~~-~~~~~l~~r~gk 295 (473)
T PRK10429 218 LTLKDIVALIYKNDQLSCLLGMALAYNIASNIINGFAIYYFTYVIG-DADLFPYYLSYAGAANLVTL-ILFPRLVKSLSR 295 (473)
T ss_pred CCHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhheeeEEEEECC-CHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCc
Confidence 3577777778889999888888888877777777777767666544 55566777776667777887 666999999999
Q ss_pred hHHHHHhHHHHHHHHHHHhh---ccc--hhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHh
Q 011514 313 AKLLSLGLFAACINMFICSI---SWS--AWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVL 387 (484)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 387 (484)
|+.+..+..+..++.+.+.. ... .+. ..+...+.+++
T Consensus 296 k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------~~i~~~l~g~~ 337 (473)
T PRK10429 296 RILWAGASIFPVLSCGVLLLMGLAAPHNALL--------------------------------------IVIAGILLNIG 337 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCchhHHH--------------------------------------HHHHHHHHHHH
Confidence 99988777765555444332 111 111 13344467777
Q ss_pred hhhhhhHHHHHHhcccC-------CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 011514 388 VVFATPSFRSIVSKQVG-------PNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKG 441 (484)
Q Consensus 388 ~~~~~~~~~~~~~~~~p-------~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~ 441 (484)
.+...+...++++|.++ .+..|..+|..+....++..+++.+.|.+.+.. +++
T Consensus 338 ~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~-Gy~ 397 (473)
T PRK10429 338 TALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLI-GYV 397 (473)
T ss_pred HHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCC
Confidence 88888888888998866 344566999999999999999999999999876 553
No 95
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.92 E-value=4.9e-29 Score=249.87 Aligned_cols=410 Identities=16% Similarity=0.174 Sum_probs=255.7
Q ss_pred HHHHHHHHHHHhhHhhHHHHHHHHhC---CCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHHH
Q 011514 15 VTVFLWGFATMMVVPAITDVTMMALC---PGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLS 91 (484)
Q Consensus 15 ~~~~~~~~~~~~~~~~l~~~~~~~~~---~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~ 91 (484)
++.+..+++.....+..+.......+ ...++.+.+..+.++..+...++..+++++.|.++||+|||+.+..+.++.
T Consensus 7 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~ 86 (451)
T PF00083_consen 7 LGGFLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLM 86 (451)
T ss_pred HHHHHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhccccccccccccccccccccccccccc
Confidence 34467777777666555544422211 111112224567799999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcc---chhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHh--
Q 011514 92 IIPLAILAYRR---SISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF-- 166 (484)
Q Consensus 92 ~i~~~~~~~~~---~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~-- 166 (484)
.++.++.++++ + ++.+.++|++.|++. |...+....++.|..|+++|++..++.+....+|.+++..++..
T Consensus 87 ~i~~~~~~~~~~~~~---~~~~~~~R~~~G~~~-g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~ 162 (451)
T PF00083_consen 87 IIGSILIAFAPSYNN---FWMLLIGRFLIGFGI-GGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVS 162 (451)
T ss_pred ccccccccccccccc---ccccccccccccccc-cccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999 7 899999999999866 66667999999999999999999999999999998888776543
Q ss_pred --h---hhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCC---CCCCcc---CcccCCCCch
Q 011514 167 --L---STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNE---SNSPVK---IPVCKKIPSI 235 (484)
Q Consensus 167 --l---~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~---~~~~~~~~~~ 235 (484)
. +||..+...++..++..+ ...++||+|++...+++.+++.+...+..+++. +.++.. ++.++++.+.
T Consensus 163 ~~~~~~~Wr~~~~~~~~~~l~~~~-~~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (451)
T PF00083_consen 163 YYSDNWGWRILLIFGAIPSLLVLL-LRFFLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASW 241 (451)
T ss_pred cccccccccccccccccccccccc-cccccccccceecccccccccccccccccccccccccccccccccccccccceee
Confidence 2 399999888877665544 446799999987666655555544333111111 111111 1111111223
Q ss_pred HHHHHHhhccchhHHHHHHHHHHhchh-hhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchH
Q 011514 236 RDLICLLRSSVTLSQAAVVAFFSGLSE-GGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAK 314 (484)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ 314 (484)
++.++....++++...........+.. .....+.+...+ ..|.+.. -......++...++. +.+.++.||+|||+
T Consensus 242 ~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~-~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~GRr~ 317 (451)
T PF00083_consen 242 RDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFE-NAGISNS--FLATLILGLVNFLGT-LLAIFLIDRFGRRK 317 (451)
T ss_pred eecccccccccccccccccccccccccccccccccccccc-ccccccc--ccccccccccccccc-cccccccccccccc
Confidence 332211110122222222222222222 223333444443 3466655 112223333344444 55568999999999
Q ss_pred HHHHhHHHHHHHHHHHh--h--ccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHH-Hhhh
Q 011514 315 LLSLGLFAACINMFICS--I--SWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFS-VLVV 389 (484)
Q Consensus 315 ~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~ 389 (484)
++..+....+++.+.+. . ..+... .... . ......+.. ....
T Consensus 318 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~-----------~--~i~~~~l~~~~~~~ 364 (451)
T PF00083_consen 318 LLIIGLLLMAICSLILGIIFFLGVSSSS--------------------WWSI-----------L--SIVFLALFFAFFSL 364 (451)
T ss_pred cccccccccccccccccccccccccccc--------------------cccc-----------c--cceeeeeccccccc
Confidence 99888888777766664 1 111100 0000 0 011111222 2222
Q ss_pred hhhhHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHHHHHHhc
Q 011514 390 FATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMS 469 (484)
Q Consensus 390 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (484)
...+..+.+..|.+|++.|+++.|+....+.+++.++|.+...+.+.. +... .+.+.+.+.++..+..+...
T Consensus 365 g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~-~~~~-------~~~i~~~~~~i~~i~~~~~l 436 (451)
T PF00083_consen 365 GWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNL-GGWG-------VFLIFAGVCLIAIIFVYFFL 436 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccc-cccc-------cchhhHHHHHHHHhheeEEE
Confidence 445667788899999999999999999999999999999988887765 3122 23444444444444444444
Q ss_pred cCCCC
Q 011514 470 HTPAS 474 (484)
Q Consensus 470 ~~~~~ 474 (484)
+|++.
T Consensus 437 pET~g 441 (451)
T PF00083_consen 437 PETKG 441 (451)
T ss_pred eeCCC
Confidence 44443
No 96
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.92 E-value=1.1e-21 Score=178.46 Aligned_cols=344 Identities=16% Similarity=0.147 Sum_probs=268.5
Q ss_pred HHHHHHHHHHHHHH----HhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHH
Q 011514 11 SHLFVTVFLWGFAT----MMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (484)
Q Consensus 11 ~~l~~~~~~~~~~~----~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~ 86 (484)
+.+..+..+..++. ..+.|.++.+.+|. +.+....|+++++..+...+.+|...+++.|+|.++.+..
T Consensus 11 ~~li~gIvlia~NLR~~itsvgPLL~~Ir~~~--------gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~ 82 (395)
T COG2807 11 LLLLAGIVLIAFNLRPAITSVGPLLDEIRQDL--------GLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFL 82 (395)
T ss_pred hHHHHHHHHHHhccchhhhhhhhhHHHHHHHh--------cccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHH
Confidence 34444444444443 45667777776555 7788889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhh--
Q 011514 87 PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAA-- 164 (484)
Q Consensus 87 ~~~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~-- 164 (484)
++++.+++.++-... + .+.++.+-.+.|.+. +..+....+.+-+.+| ++-+..++++....++|..+++.+.
T Consensus 83 ~Llli~~G~~iR~~~-~---~~~L~~gt~l~G~gI-av~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavp 156 (395)
T COG2807 83 ALLLIAAGILIRSLG-G---LPLLFLGTLLAGAGI-AVINVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAALAVP 156 (395)
T ss_pred HHHHHHHHHHHHhcc-c---HHHHHHHHHHHHhhH-HHHHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHHHHhhhhhH
Confidence 999999999998887 4 578889999999654 7777788999999997 6779999999999999888776554
Q ss_pred --Hhh-hhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHHHHHH
Q 011514 165 --RFL-STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICL 241 (484)
Q Consensus 165 --~~l-~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (484)
... +||.....-+..+++.++. ++|...+++..+ ...+..+..+
T Consensus 157 la~~~~gW~~aL~~WAl~allAl~~---WlPq~~r~~~~~--------------------------~~~~~~~~~~---- 203 (395)
T COG2807 157 LAQHSGGWRGALGFWALLALLALLI---WLPQALREQAAS--------------------------IATKLVSVRK---- 203 (395)
T ss_pred HHHhhccHHHHHHHHHHHHHHHHHH---Hhhhcccccccc--------------------------cccccccccc----
Confidence 333 7999888877666655443 345532221111 0001111112
Q ss_pred hhccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhc-chHHHHHhH
Q 011514 242 LRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILG-EAKLLSLGL 320 (484)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g-~~~~~~~~~ 320 (484)
++++|.-|.+.+...+.++.++....|+|.++.|. |+|+.+.|.+.+...+.....+ +..+.+.+|.+ +|+......
T Consensus 204 vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~-G~sa~~aG~llsl~~l~~~~~~-ll~P~la~R~~n~r~~~~~~~ 281 (395)
T COG2807 204 VWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILIDR-GLSAAEAGSLLSLMQLAQLPTA-LLIPLLARRSKNQRPLVVLAL 281 (395)
T ss_pred cccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHHc-CCCHHHhhhHHHHHHHHHHHHH-HHHHHHHHHhcccchHHHHHH
Confidence 56789999999999999999999999999999998 9999999999999999999999 77799999765 466666677
Q ss_pred HHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHh
Q 011514 321 FAACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVS 400 (484)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 400 (484)
.++.++.+.+.+.+.... ...++++|.+.+..+|...+.+.
T Consensus 282 ~~~l~G~~G~~~~P~~~~---------------------------------------~lw~~llG~G~G~~F~laL~li~ 322 (395)
T COG2807 282 LLMLVGLVGLLLAPGQLP---------------------------------------ILWALLLGLGQGGAFPLALTLIL 322 (395)
T ss_pred HHHHHHHHHHHHhhhhHH---------------------------------------HHHHHHHhCccchHHHHHHHHHH
Confidence 777788777766655443 22256899999999999888888
Q ss_pred cccC-CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 011514 401 KQVG-PNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGA 442 (484)
Q Consensus 401 ~~~p-~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~ 442 (484)
+..+ +++.++-.|+.+.++++-..+||.+.|++.|.+++...
T Consensus 323 ~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~ 365 (395)
T COG2807 323 LRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSA 365 (395)
T ss_pred hhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHH
Confidence 7765 45677889999999999999999999999999866655
No 97
>PRK09669 putative symporter YagG; Provisional
Probab=99.92 E-value=1e-21 Score=196.13 Aligned_cols=347 Identities=12% Similarity=0.037 Sum_probs=233.3
Q ss_pred HHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccc----cCchh-HhHHHHHH
Q 011514 16 TVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQ----YGRKA-MLTLPLTL 90 (484)
Q Consensus 16 ~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr----~Grk~-~l~~~~~~ 90 (484)
+.+............++.+.++.. +++....|.+.++..+...+..|+.|.++|| +|||| .++.+.+.
T Consensus 17 g~~~~~~~~~~~~~~l~~~~t~~~-------gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~ 89 (444)
T PRK09669 17 GDTACNLVWQTVMLFLAYFYTDVF-------GLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIP 89 (444)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHhc-------CCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHH
Confidence 333334334444555666665543 7788899999999999999999999999998 78754 55577777
Q ss_pred HHHHHHHHHhccch---hhHHHHHHHHHHhhhhccchhhHhhhHHHhhcC-CccchhHHHHHHHHHHHhHHhHHHHhhH-
Q 011514 91 SIIPLAILAYRRSI---SFFYAYYALRTLTAMVCEGSINCLALAYVADNI-SERQRASAFGILLGVLSASFVCGTLAAR- 165 (484)
Q Consensus 91 ~~i~~~~~~~~~~~---~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~ig~~l~~- 165 (484)
.+++..+....++. ...+.+++..++.+.+. ........++.+|+. ++++|++..++......+|..+++.+..
T Consensus 90 ~~i~~~l~f~~p~~~~~~~~~~~~~~~~l~~~~~-t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~p 168 (444)
T PRK09669 90 FGVVCLLTFYTPDFGATGKIIYACVTYILLSLVY-TAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALP 168 (444)
T ss_pred HHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHH-HhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777666555542 22345556666666544 344445778999998 4688999989888888888777664332
Q ss_pred ---h-------hhhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCch
Q 011514 166 ---F-------LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSI 235 (484)
Q Consensus 166 ---~-------l~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (484)
. .+|+..+.+.+++..+..+..++..+|.++++++ ++.+.
T Consensus 169 l~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~~~~~~~e~~~~~~~------------------------------~~~~~ 218 (444)
T PRK09669 169 LVDILGKGDEQKGYFYAMMVMGLLGVVLFFCCFFMTKERYTPEVD------------------------------NSSSV 218 (444)
T ss_pred HHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHhCCeEEecCCCCc------------------------------CCCCH
Confidence 1 2577777777766666665555555553221100 11234
Q ss_pred HHHHHHhhccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHH
Q 011514 236 RDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKL 315 (484)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~ 315 (484)
++.++...+||.++......++............++|.++..+. ++..+.+.....+..+++. ++.+++.||+|+|+.
T Consensus 219 ~~~~~~~~~n~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~~-~~~~~~~~~~~~i~~ii~~-~~~~~l~~r~gk~~~ 296 (444)
T PRK09669 219 WKDLKLLLGNSQWRIMFIFNVVLLTAVVTRGGATLYYVNYVLLR-PDLATLFLVTGMIAGLFGA-LLSERLLGKFDRVRA 296 (444)
T ss_pred HHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhhheeeeeecCC-HHHHHHHHHHHHHHHHHHH-HHHHHHHHHhChHHH
Confidence 55566678889988888777776666655555556665555443 3333444444445555555 666899999999999
Q ss_pred HHHhHHHHHHHHHHHhhc-c-chhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhh
Q 011514 316 LSLGLFAACINMFICSIS-W-SAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATP 393 (484)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 393 (484)
...+..+..+....+.+. . +.+. +.....+.+++.+...+
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------~~~~~~i~g~~~~~~~~ 338 (444)
T PRK09669 297 FKWTIVAFVILSALIFFIPPSNVWL--------------------------------------IFALNILFNFIQNLTTP 338 (444)
T ss_pred HHHHHHHHHHHHHHHHHhCcchHHH--------------------------------------HHHHHHHHHHHHHHHHH
Confidence 887776655433322222 2 2222 13444577888888889
Q ss_pred HHHHHHhcccC-------CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 011514 394 SFRSIVSKQVG-------PNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKG 441 (484)
Q Consensus 394 ~~~~~~~~~~p-------~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~ 441 (484)
..+++++|..+ ++..|..+|..+....+|..+|+.+.|.+.+.. +++
T Consensus 339 ~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~-Gy~ 392 (444)
T PRK09669 339 LQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWV-DYV 392 (444)
T ss_pred HHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCC
Confidence 99999998875 234567889999999999999999999999986 664
No 98
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.92 E-value=1.6e-22 Score=187.87 Aligned_cols=376 Identities=13% Similarity=0.088 Sum_probs=280.8
Q ss_pred hhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhH-hHHHHHHHHHHHHHHHhccch
Q 011514 26 MVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAM-LTLPLTLSIIPLAILAYRRSI 104 (484)
Q Consensus 26 ~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~-l~~~~~~~~i~~~~~~~~~~~ 104 (484)
....++|.|.++....+..+...+....|...++..+...+.+|+.|.++|+.|+||. +-....+..++..+..+.++.
T Consensus 33 vtt~ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~ 112 (438)
T COG2270 33 VTTFIFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPG 112 (438)
T ss_pred eeeehhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCC
Confidence 4456778888777543333434455577999999999999999999999999997655 446666777777777777663
Q ss_pred hhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhh------H-------------
Q 011514 105 SFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAA------R------------- 165 (484)
Q Consensus 105 ~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~------~------------- 165 (484)
..++..++.-.+..++. .......++++.|..++++-++..+.-.....+|..+--... +
T Consensus 113 s~~~~~l~~~il~~i~~-~~s~Vfyds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~ 191 (438)
T COG2270 113 SYLLLLLLFLILASIGF-EFSNVFYDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLP 191 (438)
T ss_pred chHHHHHHHHHHHHHhc-chhheehhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccC
Confidence 33566666677777655 444567999999999988877776655555555544332221 1
Q ss_pred ---hhhhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHHHHHHh
Q 011514 166 ---FLSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLL 242 (484)
Q Consensus 166 ---~l~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (484)
...-|..+.+.++..++..+..++..||.++..... .+...+..+++++.++..
T Consensus 192 ~~~~~~~ri~~~l~A~W~li~~iPm~~~v~~~~~~~~~~-----------------------~~~l~~g~k~L~~t~k~i 248 (438)
T COG2270 192 PADGEDVRITGLLAALWWLLFALPMILNVHDAEKISSPP-----------------------PTALRNGFKELKSTFKEI 248 (438)
T ss_pred ccccccchhHHHHHHHHHHHHHhHHHhcccccccccccc-----------------------hHHHHHHHHHHHHHHHHH
Confidence 012378888888888888888887777766432110 001111223455667778
Q ss_pred hccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHH
Q 011514 243 RSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFA 322 (484)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~ 322 (484)
++++.+...++..+++.-+.....++...|....+|++..+...+.....+.+++++ ++.|++.||+|.|+++..++.+
T Consensus 249 ~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~-ii~g~Ld~rfg~k~vl~~~lvi 327 (438)
T COG2270 249 RGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGA-IIAGFLDERFGSKPVLMIGLVI 327 (438)
T ss_pred hcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCceeehHHHHH
Confidence 889999999999999999999999999999998999999999999999999999999 7779999999999999888888
Q ss_pred HHHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcc
Q 011514 323 ACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQ 402 (484)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 402 (484)
..+.++...+...... ......+.|.+.+......+++..+.
T Consensus 328 ~~~~~~~~~~~~~~~~--------------------------------------f~i~gll~g~s~G~~qA~SRSy~~~l 369 (438)
T COG2270 328 LSIAALYLIFLEGELD--------------------------------------FWILGLLVGTSLGGAQASSRSYLARL 369 (438)
T ss_pred HHHHHHHHHHccccHH--------------------------------------HHHHHHHHHHhcchHHHHHHHHHHHh
Confidence 7777666666555444 25556689999999999999999999
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHHHHHHhccC
Q 011514 403 VGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSHT 471 (484)
Q Consensus 403 ~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (484)
+|+++.++.+|+++..+..++.+||...+.+.+.+++.+. .+....++..++.....+.+.+
T Consensus 370 vp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~-------g~~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 370 VPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRA-------GVLSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred CCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhh-------HHHHHHHHHHhhHhhEEeecCC
Confidence 9999999999999999999999999999999999865554 2344545555555554444444
No 99
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.92 E-value=1.6e-21 Score=196.46 Aligned_cols=380 Identities=11% Similarity=0.022 Sum_probs=226.6
Q ss_pred hhHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccc-cCchhHhH
Q 011514 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQ-YGRKAMLT 85 (484)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr-~Grk~~l~ 85 (484)
+|.++.++...+...++.....+.++.+.++.+ +.+....+++.+.+........+++|+++|| +|||+.+.
T Consensus 20 p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~l-------g~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~ 92 (500)
T PRK09584 20 PKAFYLIFSIELWERFGYYGLQGIMAVYLVKQL-------GMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIM 92 (500)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHH
Confidence 456788888889999999888899999986654 3333445666666665555666789999999 59999999
Q ss_pred HHHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccc--hhHHHHHHHHHHHhHHhHHHHh
Q 011514 86 LPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQ--RASAFGILLGVLSASFVCGTLA 163 (484)
Q Consensus 86 ~~~~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~--r~~~~~~~~~~~~~g~~ig~~l 163 (484)
.+.++.+++..+++++++. .+.+.+.|+++|++. |...|...+++.|++|+++ |++++++...+.++|..+||.+
T Consensus 93 ~g~~~~~ig~~l~~~~~~~--~~~l~~~~~l~gig~-g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i 169 (500)
T PRK09584 93 LGAIVLAIGYALVAWSGHD--AGIVYMGMATIAVGN-GLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLA 169 (500)
T ss_pred HHHHHHHHHHHHHHHhccc--HHHHHHHHHHHHHhh-hcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHH
Confidence 9999999999999887531 456678899999755 6666788899999998543 4568888899999999999988
Q ss_pred hHh----hhhHHHHHHHHHHHHHHH---HHHHHHcccCCCCCCCC-CCCCCcccc--------cccccCCCCCCCCccCc
Q 011514 164 ARF----LSTTSAFQAATIVSMLAA---AYMRVFLKDDVPNDDDD-DLTRPIITE--------ETEGVNQNESNSPVKIP 227 (484)
Q Consensus 164 ~~~----l~~~~~f~~~~~~~~i~~---~~~~~~lpe~~~~~~~~-~~~~~~~~~--------~~~~~~~~~~~~~~~~~ 227 (484)
++. .|||+.|.+.++...+.. +.....++|.++..+++ .|..+.... ........+. +....
T Consensus 170 ~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 247 (500)
T PRK09584 170 TPWLAAKYGWSVAFALSVVGMLITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIVGVVALIAIATWLLHNQ--EIARM 247 (500)
T ss_pred HHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhHHHhccCCCCCCccccchhhHHHHHHHHHHHHHHHHHHHhcc--hHHHH
Confidence 876 489999998875444433 23333444432211111 011000000 0000000000 00000
Q ss_pred ccCC------CCchHHHH--HHhhccchhHHHHHHHHHHhchhhhhHHHHHHHHh----hh-----cCcChhhHHHHHHH
Q 011514 228 VCKK------IPSIRDLI--CLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLK----AQ-----FHFNKNQFADLMLI 290 (484)
Q Consensus 228 ~~~~------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-----~g~~~~~~~~~~~~ 290 (484)
.... ....++.. +...+ ++.+..+. .++....+.......+.++. +. .|+. ...+++.+.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~-i~~~~~~s~ 324 (500)
T PRK09584 248 ALGVVALGIVVIFGKEAFAMKGAAR-RKMIVAFI-LMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIA-VEPEQYQAL 324 (500)
T ss_pred HHHHHHHHHHHHHHHHHhhcCHHHH-HHHHHHHH-HHHHHHHHHHHHHHhccHHHHHHHHhccccccceE-ECHHHHHHH
Confidence 0000 00000000 00111 22222221 12222223333333333322 21 1211 124566666
Q ss_pred HHHHHHHHHHHH---HHHhhhhhcchHHHHHhHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHH
Q 011514 291 AGLAGTISQLLF---MPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLL 367 (484)
Q Consensus 291 ~~~~~~~~~~~~---~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~ 367 (484)
.++..++..++. .+++.||.+..+.+.+++.+.+++++.+........ .++.++.|+
T Consensus 325 n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~-----------------~~~~vs~~~--- 384 (500)
T PRK09584 325 NPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFAN-----------------DAGIVSVNW--- 384 (500)
T ss_pred hHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcC-----------------CCCccCHHH---
Confidence 666666665332 245555666667888899999998888765533110 000111111
Q ss_pred HHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHH
Q 011514 368 KILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIF 430 (484)
Q Consensus 368 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~ 430 (484)
......+.+++.....|...+++.+..|++.||+++|.......+|+.++..+.
T Consensus 385 ---------~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~ 438 (500)
T PRK09584 385 ---------LIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVA 438 (500)
T ss_pred ---------HHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 255666889999999999999999999999999999977666665555554444
No 100
>PRK09848 glucuronide transporter; Provisional
Probab=99.91 E-value=1.8e-21 Score=194.69 Aligned_cols=354 Identities=11% Similarity=-0.015 Sum_probs=232.9
Q ss_pred HHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhccccc----CchhHh-H
Q 011514 11 SHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQY----GRKAML-T 85 (484)
Q Consensus 11 ~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~----Grk~~l-~ 85 (484)
....++.+...+..++..+.++.|.++.. +++..+.|.+.+...+...+..|++|+++||. ||||.. .
T Consensus 11 ~~yg~g~~~~~~~~~~~~~~l~~y~~~~~-------gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~ 83 (448)
T PRK09848 11 VGYSLGDVANNFAFAMGALFLLSYYTDVA-------GVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLL 83 (448)
T ss_pred HhhccchHHhHHHHHHHHHHHHHHHHHHc-------CCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHH
Confidence 33345666677777778888888877654 56677889999999999999999999999996 777654 5
Q ss_pred HHHHHHHHHHHHHHhcc-ch---hhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCC-ccchhHHHHHHHHH-----HHh
Q 011514 86 LPLTLSIIPLAILAYRR-SI---SFFYAYYALRTLTAMVCEGSINCLALAYVADNIS-ERQRASAFGILLGV-----LSA 155 (484)
Q Consensus 86 ~~~~~~~i~~~~~~~~~-~~---~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~-----~~~ 155 (484)
.+.+...+...+....+ .. ...+..+....+.+++. +...+...++..|..+ +++|.+..+....+ ..+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~ 162 (448)
T PRK09848 84 FGTAPLMIFSVLVFWVPTDWSHSSKVVYAYLTYMGLGLCY-SLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCL 162 (448)
T ss_pred HHHHHHHHHHHHHHhCcCCCCcchHHHHHHHHHHHHHHHH-HHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 55554554444432112 11 11233344445566544 4555566777777765 46788877665543 234
Q ss_pred HHhHHHHhhHhhh------hHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCccc
Q 011514 156 SFVCGTLAARFLS------TTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVC 229 (484)
Q Consensus 156 g~~ig~~l~~~l~------~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (484)
+..++|.++...+ |.....+.+++..+..+......||+++.+++
T Consensus 163 ~~~~~p~i~~~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~e~~~~~~~----------------------------- 213 (448)
T PRK09848 163 AFLIGPSIKNSSPEEMVSVYHFWTIVLAIAGMVLYFICFKSTRENVVRIVA----------------------------- 213 (448)
T ss_pred HHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCcEeccCCCcc-----------------------------
Confidence 5666776665432 11111222223333333333334544221110
Q ss_pred CCCCchHHHHHHhhccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 011514 230 KKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPI 309 (484)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 309 (484)
+++.++.++.+++||.++...+..++............|+|.++.+|.++...+.......++..++. .+.+++.||
T Consensus 214 --~~~~~~~~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~r 290 (448)
T PRK09848 214 --QPSLKISLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASA-PLVPGMVAR 290 (448)
T ss_pred --CCCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 12345556668899999988888888887777777788888988888776654443333345555666 666999999
Q ss_pred hcchHHHHHhHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhh
Q 011514 310 LGEAKLLSLGLFAACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVV 389 (484)
Q Consensus 310 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 389 (484)
+|+|+.+..+..+..++.+.+.+.+.... |. ......+.+++.+
T Consensus 291 ~g~~~~~~~g~~~~~i~~~~~~~~~~~~~------------------------~~------------~~~~~~l~g~G~~ 334 (448)
T PRK09848 291 IGKKNTFLIGALLGTCGYLLFFWVSVWSL------------------------PV------------ALVALAIASIGQG 334 (448)
T ss_pred hCcHHHHHHHHHHHHHHHHHHHHcCchhH------------------------HH------------HHHHHHHHHHHHH
Confidence 99999999998888877776655432111 00 1333446788888
Q ss_pred hhhhHHHHHHhcccCCC-------chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 011514 390 FATPSFRSIVSKQVGPN-------EQGKAQGCISGISSFANIVSPLIFSPLTALFLSKG 441 (484)
Q Consensus 390 ~~~~~~~~~~~~~~p~~-------~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~ 441 (484)
...+...++..|..|++ ++|..+|+.+....+|..+|+.+.|.+.+.. +++
T Consensus 335 ~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~-G~~ 392 (448)
T PRK09848 335 VTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLS-GYI 392 (448)
T ss_pred HHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCC
Confidence 88888888888888754 4699999999999999999999999998875 543
No 101
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.91 E-value=2.6e-23 Score=213.90 Aligned_cols=298 Identities=13% Similarity=0.155 Sum_probs=216.6
Q ss_pred HHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHHHHHHH
Q 011514 16 TVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPL 95 (484)
Q Consensus 16 ~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~i~~ 95 (484)
..+...+..+...+.++.+.+++ +++..+.|++.+.+.++++++.++.|+++||+|||+.+.++.++.+++.
T Consensus 41 ~~~~~~~~~g~~~~~l~~iek~F--------~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ 112 (633)
T TIGR00805 41 AQLQGLLYNGLVNSSLTTIERRF--------KLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGS 112 (633)
T ss_pred HHHHHHHHHHHHHhhchhhhhhh--------CCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHH
Confidence 44444555567777777776665 5556677999999999999999999999999999999999999999999
Q ss_pred HHHHhccc------------------------------------------------hhhHHHHHHHHHHhhhhccchhhH
Q 011514 96 AILAYRRS------------------------------------------------ISFFYAYYALRTLTAMVCEGSINC 127 (484)
Q Consensus 96 ~~~~~~~~------------------------------------------------~~~~~~l~~~r~l~G~~~~g~~~~ 127 (484)
+++++.+- ...+..++++|+++|++. +...+
T Consensus 113 ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~-~~~~~ 191 (633)
T TIGR00805 113 FLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGA-TPIFP 191 (633)
T ss_pred HHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccC-Ccchh
Confidence 99887630 002456789999999765 77778
Q ss_pred hhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHhh--------------------------hhHHHHHHHHHHHH
Q 011514 128 LALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL--------------------------STTSAFQAATIVSM 181 (484)
Q Consensus 128 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l--------------------------~~~~~f~~~~~~~~ 181 (484)
...+++.|++|+++|++++++......+|..+|+++++.+ +|+..|++.+++.+
T Consensus 192 ~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~ 271 (633)
T TIGR00805 192 LGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVAL 271 (633)
T ss_pred cCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999888652 27778888887777
Q ss_pred HHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHHHHHHhhccchhHHHHHHHHHHhch
Q 011514 182 LAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLS 261 (484)
Q Consensus 182 i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (484)
+..+.. +.+|++.++...+.+.+... .+..++.+++ ..........+..+..+.+.+||.++...+..++....
T Consensus 272 l~~v~l-~~~p~~lp~~~~~~~~~~~~---~~~~~~~~~~--~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~ 345 (633)
T TIGR00805 272 LTSIPF-FFFPKALPKEGKRVNVDVHE---TEKLEKSEDK--SRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLA 345 (633)
T ss_pred HHHHHH-HhCccccCCcccccchhhhh---hhcccccccc--cchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 766544 45666543221110000000 0000000000 00000011122334455688899999999999999999
Q ss_pred hhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHH-HHHHHHHHHHHhhhhhc--chHHHHHhHHHHHHHHHH
Q 011514 262 EGGMQASFLYFLKAQFHFNKNQFADLMLIAGLA-GTISQLLFMPLLAPILG--EAKLLSLGLFAACINMFI 329 (484)
Q Consensus 262 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~g--~~~~~~~~~~~~~~~~~~ 329 (484)
..++.+++|.|+++.+|+++.+++.+.....+. .+++. +++|+++||++ .|+.+..+..+..++.+.
T Consensus 346 ~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~-~l~G~l~~r~~~~~~~~~~~~~~~~~~~~~~ 415 (633)
T TIGR00805 346 FNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGY-LIGGFIMKKFKLNVKKAAYFAICLSTLSYLL 415 (633)
T ss_pred HHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHH-hhhhheeeeecccHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998877764 45555 88899999987 456777777666665443
No 102
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.91 E-value=3.8e-22 Score=203.45 Aligned_cols=338 Identities=19% Similarity=0.131 Sum_probs=232.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhH
Q 011514 48 LAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINC 127 (484)
Q Consensus 48 ~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~ 127 (484)
.+.....+..+++.+|.+++++++|.++||+|||++++.+.++..++.++.++++| ++.+++.|++.|++.++. ..
T Consensus 115 ~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~---~~~~~~~Rfl~G~~~~~~-~~ 190 (521)
T KOG0255|consen 115 DSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPN---YWMFLIFRFLSGFFGSGP-LT 190 (521)
T ss_pred CcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCc---HHHHHHHHHHHHhhccch-hH
Confidence 34567788999999999999999999999999999999999999999999999999 899999999999877444 46
Q ss_pred hhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHhh--hhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCC
Q 011514 128 LALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL--STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTR 205 (484)
Q Consensus 128 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l--~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~ 205 (484)
....+++|+.++++|+.+..+ ......+..+++..++++ +||+.+++..+...+..++ ++..||+|++...+++.+
T Consensus 191 ~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~~Wr~~~~~~~~~~~~~~~~-~~l~~Es~rwl~~~g~~~ 268 (521)
T KOG0255|consen 191 VGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITRDWRWLFWIISIPSGLFLLL-WFLPPESPRWLLSKGRID 268 (521)
T ss_pred HhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HHccCcChHHHHHcCchH
Confidence 899999999999999999999 666666667776666654 7999999999777776655 666779999876665554
Q ss_pred CcccccccccCCC---CCC---CCcc--Cccc-----CCCCchHHHHHHhhccchhHHHHHHHHHHhchhhhhHHHHHHH
Q 011514 206 PIITEETEGVNQN---ESN---SPVK--IPVC-----KKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYF 272 (484)
Q Consensus 206 ~~~~~~~~~~~~~---~~~---~~~~--~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (484)
++....++..+.+ .+. .+.. .... ++.....+ +.+.++++...+...+.++.......-++..
T Consensus 269 ~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l~~~~~l~~~~~~~~~~~~~~~~~y~gl~~~ 344 (521)
T KOG0255|consen 269 EAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLD----LFRTPRLRYRTLYLLFIWFVFSLVYYGLSLN 344 (521)
T ss_pred HHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhh----hhcCHHHHHHHHHHHHHHHHHhHHHHhhhhh
Confidence 4443322211100 000 0000 0000 01112222 4444544444444444443333323223333
Q ss_pred HhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHH
Q 011514 273 LKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVIKIFFNKVFKLLLL 352 (484)
Q Consensus 273 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (484)
... +|.+.. ......+....... ...+...|+.|||.....+..+..++++..++......
T Consensus 345 ~~~-lg~~~~---~~~~~~~~~~~p~~-~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 405 (521)
T KOG0255|consen 345 VSG-LGGNIY---LNFTLSGLVELPAY-FRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLG-------------- 405 (521)
T ss_pred hhh-cCchHH---HHHHHHHHHHhhHH-HHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccch--------------
Confidence 322 343332 33333334444444 55578899999999999999999999988887664332
Q ss_pred HhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 011514 353 SFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSP 432 (484)
Q Consensus 353 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~ 432 (484)
. ++ ......+..++.+........+..|.+|+..|+.+.+..+....++.+++|.+.-.
T Consensus 406 ------~-~~--------------~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~ 464 (521)
T KOG0255|consen 406 ------G-WL--------------HWILPLLGKFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLL 464 (521)
T ss_pred ------h-HH--------------HHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 00 02333344455555666668899999999999999999999999999999998754
Q ss_pred HHH
Q 011514 433 LTA 435 (484)
Q Consensus 433 l~~ 435 (484)
...
T Consensus 465 ~~~ 467 (521)
T KOG0255|consen 465 LRQ 467 (521)
T ss_pred Hhh
Confidence 443
No 103
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.91 E-value=6.8e-22 Score=178.75 Aligned_cols=371 Identities=15% Similarity=0.062 Sum_probs=247.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhh
Q 011514 47 SLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSIN 126 (484)
Q Consensus 47 ~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~ 126 (484)
+.+..+..++......+..+++-.||..+|++|||+.+....+...+...+.+.++| +..+.+.|.+.|.+. |. .
T Consensus 109 ~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~spn---f~~L~~f~~l~~~g~-gg-~ 183 (528)
T KOG0253|consen 109 GPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGASPN---FASLCVFRALWGFGV-GG-L 183 (528)
T ss_pred chhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCCCC---eehhhHHHHHHhccC-CC-c
Confidence 566667789999999999999999999999999999999999999999999999999 889999999999766 44 5
Q ss_pred HhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHh----hhhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCC
Q 011514 127 CLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDD 202 (484)
Q Consensus 127 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~----l~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~ 202 (484)
|...++-.|..|..+|....-.. ..+.+|.+....+.-. +||||...... ..+..+....+++||+|+..-.++
T Consensus 184 pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~gwr~~l~~~~-~pl~~~a~f~~w~~ESpRf~~~~G 261 (528)
T KOG0253|consen 184 PVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLFTSS-TPLMFAARFLVWVYESPRFYLAKG 261 (528)
T ss_pred cHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH-hHHHHHHHHHhhcccCcchhhhcC
Confidence 78889999999998988877666 8888888887766633 69999888877 444444555567999998765555
Q ss_pred CCCCccccccc-----------------ccCCCCCCC--Ccc---CcccCCCCchHHHHHHhhccchhHHHHHHHHHHhc
Q 011514 203 LTRPIITEETE-----------------GVNQNESNS--PVK---IPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGL 260 (484)
Q Consensus 203 ~~~~~~~~~~~-----------------~~~~~~~~~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (484)
+..++.+..++ ..+++++++ .++ +..++...+..+.+..-.+ +.........|...+
T Consensus 262 ~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke~rg~~~nLlsp~lr-kttlllw~iwfgnaf 340 (528)
T KOG0253|consen 262 DDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKEVRGGTTNLLSPKLR-KTTLLLWRIWFGNAF 340 (528)
T ss_pred ChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhccccccccchHhhcChHHH-HHHHHHHHHHHhhHH
Confidence 54444331110 111111111 011 1112222333333222111 222223333333333
Q ss_pred hhhhhHHH-----------------HHHHHhhhcC--cChhhHHHH-HHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhH
Q 011514 261 SEGGMQAS-----------------FLYFLKAQFH--FNKNQFADL-MLIAGLAGTISQLLFMPLLAPILGEAKLLSLGL 320 (484)
Q Consensus 261 ~~~~~~~~-----------------~~~~~~~~~g--~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~ 320 (484)
.+++..-. .|.+.+-... .+..+ -+. ..+..+....+. ++.+++.||+|||+.+..++
T Consensus 341 syyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~-dYrdllitslaefPGl-LIt~~iverlGRKkTMal~l 418 (528)
T KOG0253|consen 341 SYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAK-DYRDLLITSLAEFPGL-LITGVIVERLGRKKTMALSL 418 (528)
T ss_pred HHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchh-HHHHHHHHHHhhCCch-hHHHHHHHHhcchhHHHHHH
Confidence 33332222 2222222110 11111 121 223445555565 88899999999999999999
Q ss_pred HHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHh
Q 011514 321 FAACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVS 400 (484)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 400 (484)
+++++..+.+....+... .....+..-++....+...+.+..
T Consensus 419 ~~f~iflfll~~c~~rn~--------------------------------------~tvllf~arafisg~fqvaYvYtP 460 (528)
T KOG0253|consen 419 ILFGIFLFLLTTCKTRNA--------------------------------------YTVLLFTARAFISGAFQVAYVYTP 460 (528)
T ss_pred HHHHHHHHHHHHhcCcch--------------------------------------hHHHHHHHHHHHhchheEEEEecC
Confidence 999888877766554433 122223445566667777888999
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHHHHHHhccCCCCC
Q 011514 401 KQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSHTPASS 475 (484)
Q Consensus 401 ~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (484)
|.+|+..|+++.|..+....+|+++.|.++ ...+. +... +..+.+.+++++.+...+++-+++.+
T Consensus 461 EVyPTavRatgvGtcSsmaRIggI~~p~iA-~~~e~--s~sl-------~i~vy~~~~ilagIavcffPiEtkGR 525 (528)
T KOG0253|consen 461 EVYPTAVRATGVGTCSSMARIGGIFSPVIA-MRAEL--STSL-------PIFVYGALFILAGIAVCFFPIETKGR 525 (528)
T ss_pred cccchhhhhcchhhhhhHHhhhhhhhhHHH-HHhcc--ceee-------hHHHHHHHHHHHHHHheeeeeccCCC
Confidence 999999999999999999999999999998 33332 3333 34677777777777777777766543
No 104
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.91 E-value=2.7e-21 Score=184.83 Aligned_cols=404 Identities=10% Similarity=0.009 Sum_probs=252.2
Q ss_pred CcchhhHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHH-HHHHHHHHHHHHHHHHhhhhhcccccCch
Q 011514 3 MEKEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYL-SGFQQAIIGLGTLVMMPVIGNLSDQYGRK 81 (484)
Q Consensus 3 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~-~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk 81 (484)
|+.|++....+|+.-|+..+=.+ ..-..|.+.+|+ +++..+ .|.+.+++..+++++.++.|.++||+|.|
T Consensus 22 ~~~W~~~~~~lC~fGF~~e~R~n-~s~a~p~L~~el--------glT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K 92 (511)
T TIGR00806 22 LKSWRVLVLYLCFYGFMAQFRPG-ESFITPYLLTVL--------NFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYK 92 (511)
T ss_pred hcchhHHHHHHHHHHHHHHhhch-HHHHHHHHHHHc--------CCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCch
Confidence 34566655555555555443221 111333444333 555566 79999999999999999999999999999
Q ss_pred hHhHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHH
Q 011514 82 AMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGT 161 (484)
Q Consensus 82 ~~l~~~~~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~ 161 (484)
+++..+.+..++..++++++++ ++.+.+.|++.|++- +... +...++.+++|+++|+++.++..++..+|.++++
T Consensus 93 ~vL~l~~l~Wsl~t~L~~fa~S---l~~L~i~R~llGvaE-A~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~ 167 (511)
T TIGR00806 93 PVLVLQALSFVCVWLLLLLGTS---VWHMQLMEVFYSVTM-AARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSS 167 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHH-HHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999 899999999999754 7776 8999999999999999999999999999999999
Q ss_pred HhhHh---hhhHHHHH---HHHHHHHHHHHHHHHHcccCCCCCC--CCCCCCCcccccccccCCCCCCCCccCcccCCCC
Q 011514 162 LAARF---LSTTSAFQ---AATIVSMLAAAYMRVFLKDDVPNDD--DDDLTRPIITEETEGVNQNESNSPVKIPVCKKIP 233 (484)
Q Consensus 162 ~l~~~---l~~~~~f~---~~~~~~~i~~~~~~~~lpe~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (484)
++++. +|||.-+. +.. .+....++..+++|..++..- ++++.++....+.+...+.+.....+....+...
T Consensus 168 ~L~qll~s~gWr~y~~Ln~Isl-~s~~~a~~~a~~LP~~~~sl~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (511)
T TIGR00806 168 VLGQLLVTLGWISYSTLNIISL-VFMTFSVFLALFLKRPKRSLFFNRLEDVRGALPCELDQMVPGPGGKLEDYLGTCRDS 246 (511)
T ss_pred HHHHHHHhcCchhHHHHHHHHH-HHHHHHHHHHHhCCCCchhhhhccccccccccccccccCCCCCccccchhhhhhhhH
Confidence 88876 47875433 333 233333444466885544211 1100000000000000000000000000001111
Q ss_pred c---hHHHHHHhhccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 011514 234 S---IRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPIL 310 (484)
Q Consensus 234 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 310 (484)
. +..-++...+|+.+....+-..+...++....++.....++..+-.+...|..-.+..+.+.+.. +..|++-.++
T Consensus 247 ~~~~l~~~~~~~y~n~~vl~WSlWwa~a~~g~~qv~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a-~~ag~~~~~w 325 (511)
T TIGR00806 247 FLVRMLSELVTIYRNPQLLLWSLWWVFNSAGYYLITYYVHTLWGTLDESLNKYNGAVDAASTLLGAITS-FIAGFVNIRW 325 (511)
T ss_pred HHHHHHHHHHHHhcCcchhhhhHHHHHHhhHHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHH-HHHHhhcCCc
Confidence 1 22223334567887777777777666666666666554444423112234667777777777777 6668876655
Q ss_pred cchH--HHHHhHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhh
Q 011514 311 GEAK--LLSLGLFAACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLV 388 (484)
Q Consensus 311 g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 388 (484)
.+.. .+.+...+.+..++++...++.|. .....+++...+
T Consensus 326 ~~~~~l~l~v~s~~~~gll~~m~~t~~Iw~--------------------------------------~Y~~yvlf~~~y 367 (511)
T TIGR00806 326 ARWSKLLIAVVSAIQAGLVFWMSQSHDIWV--------------------------------------LYVTYVLFRGIY 367 (511)
T ss_pred hhhHHHHHHHHHHHHHHHhhhhhcccchHH--------------------------------------HHHHHHHHHHHH
Confidence 4422 333344455556677777777777 123344667777
Q ss_pred hhhhhHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh-h--cCCCCcccCchHHHHHHHHHHHHHH
Q 011514 389 VFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF-L--SKGAPFNFPGFSIMCIGLASMVAFI 463 (484)
Q Consensus 389 ~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (484)
....+.....+++....+.-|-++|+++++.-+-+.+-..+. .|.. . +...-|...+.-|.+.+++.++...
T Consensus 368 ~flitia~~~iA~~L~~~~~aLvFGiNtfvAl~LQtilT~iV---vd~~gl~l~i~~Qf~vY~~yf~~~~~i~~~~~~ 442 (511)
T TIGR00806 368 QFLVPIATFQIASSLSKELCALVFGINTFVATALKTIITAVV---SDKRGLGLQVRKQFRIYSVYFLVLSIICFFGAG 442 (511)
T ss_pred HHHHHHHHHHHHHHhcccceEEEEecHHHHHHHHHHheEEEE---EcccccCCCceeEEEehhhHHHHHHHHHHHHHH
Confidence 888888888888888888889999999988776665544332 2221 0 1122233334445555555555444
No 105
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.91 E-value=1.8e-21 Score=190.09 Aligned_cols=374 Identities=33% Similarity=0.535 Sum_probs=278.5
Q ss_pred HHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchh-HHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHH
Q 011514 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSL-AIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPL 88 (484)
Q Consensus 10 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~-~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~ 88 (484)
...+....++..++.++..+..........|...++.+. +....+.-.....+...+.++..|.++||+|||..+....
T Consensus 20 ~~~~~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~grk~~L~~~~ 99 (463)
T KOG2816|consen 20 MRHLEPLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRYGRKVVLLLPL 99 (463)
T ss_pred hhHHHHHHHHHHHHHHhcCcchhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhhhhhhhHHHHH
Confidence 455566777788888877766666555544333333222 2223344334457888999999999999999999999999
Q ss_pred HHHHHHHHHHHhccchhhHHHHHHHHHHhhhhc-cchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHhh
Q 011514 89 TLSIIPLAILAYRRSISFFYAYYALRTLTAMVC-EGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL 167 (484)
Q Consensus 89 ~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~-~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l 167 (484)
....+..+...+... |. ++ +.|+.+ -+.......++++|.+.+++|....++.+.....+..++|.+++.+
T Consensus 100 ~~~~l~~~~~~~~~~----~~-~~---~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~ 171 (463)
T KOG2816|consen 100 FGTILPALCLLFQGY----WF-FL---LLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYL 171 (463)
T ss_pred HHHHHhHHHHHHHHH----HH-hh---hcccccchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 999998888877652 22 22 333322 1345567899999999999999999999999999999999999874
Q ss_pred ----hhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHHHHHHhh
Q 011514 168 ----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLR 243 (484)
Q Consensus 168 ----~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (484)
+.-.+|.++.+..++..++..+++||+.+++++++. ...+....+....+..+..+...+ ..
T Consensus 172 ~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~-~~ 237 (463)
T KOG2816|consen 172 VKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDA-------------TLRELTPGSLDSSHVADAFQSLTK-VG 237 (463)
T ss_pred HHhcCchHHHHHHHHHHHHHHHHHhhccccccCccccccc-------------cccccCCCcccchhhhhhhhhhcc-cC
Confidence 667889999999999999999999999876655410 000000000000111111111111 33
Q ss_pred ccchhHHHHHHHHHHhchhhh-hHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHH
Q 011514 244 SSVTLSQAAVVAFFSGLSEGG-MQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFA 322 (484)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~ 322 (484)
++|..+.+.+..+........ .....+.|++..++|++.+.+.+.+..+....+.+.+..+.+.+.++.++.+..|+..
T Consensus 238 ~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~ 317 (463)
T KOG2816|consen 238 PDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLS 317 (463)
T ss_pred CCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHH
Confidence 445555555555554444433 3324578899999999999999999999999999988888999999999999999999
Q ss_pred HHHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcc
Q 011514 323 ACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQ 402 (484)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 402 (484)
..+.....++.++.|+ ++.............|...+..+..
T Consensus 318 ~~~~~~~~af~~~~w~---------------------------------------~~~~~v~~~~~~~~~pa~~s~~s~~ 358 (463)
T KOG2816|consen 318 EFLQLLLFAFATETWM---------------------------------------MFAAGVVVALAGIVFPAIRAFASIL 358 (463)
T ss_pred HHHHHHHHHHhccchh---------------------------------------hhHHHHHHHhhcchhHHHHhHHHhh
Confidence 9999999999999998 7777778888888999999999999
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCc
Q 011514 403 VGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPF 444 (484)
Q Consensus 403 ~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~~~ 444 (484)
++++++|+++++...+..+.+.++|.+.+.++..+.....+.
T Consensus 359 v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~~t~~~~~~~ 400 (463)
T KOG2816|consen 359 VSPEEQGKVFGIISGIEGLSGVVSPALYGNIFALTLDDLPGF 400 (463)
T ss_pred cccccccchhhHHHHHHHHhhhhhHHHHHHHHHHHHHhcccc
Confidence 999999999999999999999999999999998875555443
No 106
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.90 E-value=2.1e-21 Score=192.92 Aligned_cols=326 Identities=15% Similarity=0.127 Sum_probs=252.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhhccc----ccCchhH-hHHHHHHHHHHHHHHHhc-c-ch---hhHHHHHHHHHH
Q 011514 47 SLAIYLSGFQQAIIGLGTLVMMPVIGNLSD----QYGRKAM-LTLPLTLSIIPLAILAYR-R-SI---SFFYAYYALRTL 116 (484)
Q Consensus 47 ~~~~~~~g~~~s~~~l~~~~~~~~~G~l~D----r~Grk~~-l~~~~~~~~i~~~~~~~~-~-~~---~~~~~l~~~r~l 116 (484)
++++...|++..+..+..++..|+.|.++| |+||||. ++.+....+++..++... + +. ....++.+..++
T Consensus 33 gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~~~~~~~~l 112 (428)
T PF13347_consen 33 GLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLVWLFVFYIL 112 (428)
T ss_pred CCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHHHHHHHHHH
Confidence 677788899999999999999999999999 7998665 557888888888888766 4 21 123344666666
Q ss_pred hhhhccchhhHhhhHHHhhcCC-ccchhHHHHHHHHHHHhHHhHHHHhhHh----h-------hhHHHHHHHHHHHHHHH
Q 011514 117 TAMVCEGSINCLALAYVADNIS-ERQRASAFGILLGVLSASFVCGTLAARF----L-------STTSAFQAATIVSMLAA 184 (484)
Q Consensus 117 ~G~~~~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~ig~~l~~~----l-------~~~~~f~~~~~~~~i~~ 184 (484)
..++. ........++.+|.++ +++|.+..+..+....+|.++...+... + +|++...+.+++..+..
T Consensus 113 ~~~~~-t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~ 191 (428)
T PF13347_consen 113 FDIAY-TFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFF 191 (428)
T ss_pred HHHhh-hhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHh
Confidence 67655 4445568899999997 5799999999988888887644433322 1 58888888888888888
Q ss_pred HHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHHHHHHhhccchhHHHHHHHHHHhchhhh
Q 011514 185 AYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGG 264 (484)
Q Consensus 185 ~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (484)
+...+..||.+++.++ ++++.+.++.++.+++||.++...+..++.......
T Consensus 192 ~i~~~~~ke~~~~~~~----------------------------~~~~~~~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~ 243 (428)
T PF13347_consen 192 LITFFFVKERSVEVTE----------------------------QEKKISLRDSLRSLFRNRPFRILLLAFFLQWLAFAL 243 (428)
T ss_pred hhhhheeeeccccccc----------------------------cccccccccchhhhcccchHHHHHHHHHHHHhhhhh
Confidence 8888888882221111 112234556666688899999999999999888888
Q ss_pred hHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhhcc--chhhHHHh
Q 011514 265 MQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISW--SAWVIKIF 342 (484)
Q Consensus 265 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 342 (484)
.....++|.++..|.+ ...+.+.....+...++. ++.++++||+|+|+.+..+..+.+++.+.+.+.+ +.+.
T Consensus 244 ~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~-~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 317 (428)
T PF13347_consen 244 MNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGS-PLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPGSPWL---- 317 (428)
T ss_pred hhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHH-HHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhhhHHH----
Confidence 8889999999988877 455777777888888887 5559999999999999999999888888777665 4444
Q ss_pred hhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCC-------CchhHHHHHH
Q 011514 343 FNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGP-------NEQGKAQGCI 415 (484)
Q Consensus 343 ~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~-------~~~g~~~g~~ 415 (484)
..+...+.+++.+.......++..|..+. ++.|..+|+.
T Consensus 318 ----------------------------------~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~ 363 (428)
T PF13347_consen 318 ----------------------------------VLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVN 363 (428)
T ss_pred ----------------------------------HHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhh
Confidence 25556688888888888889999988763 4568999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 011514 416 SGISSFANIVSPLIFSPLTALFLSKGA 442 (484)
Q Consensus 416 ~~~~~lg~~~gp~i~g~l~~~~~~~~~ 442 (484)
+....++..+++.+.|.+.+.. +++.
T Consensus 364 ~~~~k~~~~la~~i~g~~l~~~-Gy~~ 389 (428)
T PF13347_consen 364 SFFIKIGQGLAGAIVGLLLALV-GYDA 389 (428)
T ss_pred hhhhHHHHHHHHHHHHHHHHHh-CcCC
Confidence 9999999999999999999886 5543
No 107
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.90 E-value=1.3e-20 Score=187.61 Aligned_cols=362 Identities=14% Similarity=0.085 Sum_probs=242.9
Q ss_pred HHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHHHHHHHHHHHhcc
Q 011514 23 ATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRR 102 (484)
Q Consensus 23 ~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~i~~~~~~~~~ 102 (484)
........++.+.+|. |.++ + ..|+.+...++..++.++.|+++|.+|||.+++.+.++..+|.++++.++
T Consensus 59 ~~~~~a~~l~~I~~di---G~~~-~-----~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~ 129 (599)
T PF06609_consen 59 VLVLPASILPYINADI---GGSD-N-----WSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQ 129 (599)
T ss_pred HHhccHHHHHHHHHhc---CCCc-c-----chHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCC
Confidence 3344456677777666 5443 2 25888889999999999999999999999999999999999999999999
Q ss_pred chhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHhh----hhHHHHHHHHH
Q 011514 103 SISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL----STTSAFQAATI 178 (484)
Q Consensus 103 ~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l----~~~~~f~~~~~ 178 (484)
| ...++++..+.|++. |... .....++|..|.|.|....+......-.....+|.++..+ +|||.|++.++
T Consensus 130 ~---~~~~iag~~l~Gvga-G~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i 204 (599)
T PF06609_consen 130 N---MNTFIAGMVLYGVGA-GVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFII 204 (599)
T ss_pred c---HHHHHHHHHHHHHhh-HHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHH
Confidence 9 888899999999754 5554 5677799999999998887777665555555667666543 79999999998
Q ss_pred HHHHHHHHHHHH-cccCCCCCCCCCC-CCC-ccccc------------------ccccC-CCCCCCCcc-----------
Q 011514 179 VSMLAAAYMRVF-LKDDVPNDDDDDL-TRP-IITEE------------------TEGVN-QNESNSPVK----------- 225 (484)
Q Consensus 179 ~~~i~~~~~~~~-lpe~~~~~~~~~~-~~~-~~~~~------------------~~~~~-~~~~~~~~~----------- 225 (484)
+..+.++...++ .|++++..+.++. .++ ..+.| ..... ..++++.+-
T Consensus 205 ~~~i~~vl~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~L 284 (599)
T PF06609_consen 205 WSGIALVLIFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLL 284 (599)
T ss_pred HHHHHHHHHHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHH
Confidence 877776655443 3333221111110 011 11100 01111 122222221
Q ss_pred ------CcccCCCCchHHHHHHhhccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChh---hHHHHHHHHHHHHH
Q 011514 226 ------IPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKN---QFADLMLIAGLAGT 296 (484)
Q Consensus 226 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~ 296 (484)
+.....++++.. .+.++++|.+...+++.++....+.....++|......++-++. +.++.....+++..
T Consensus 285 v~F~~wE~~~~~~~Pl~P-~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~ 363 (599)
T PF06609_consen 285 VAFVVWEWFGAPKDPLFP-HRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSC 363 (599)
T ss_pred HHHHHhhhhccCCCCcCC-HHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHH
Confidence 111111122211 22233345666666777777777777778888888877776653 45677777788777
Q ss_pred HHHHHHHHHhhhhhcc-hHHHHHhHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhcc
Q 011514 297 ISQLLFMPLLAPILGE-AKLLSLGLFAACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFM 375 (484)
Q Consensus 297 ~~~~~~~~~l~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 375 (484)
++. .+.+.+..++++ |+.++++..++.+.+..++....... +.
T Consensus 364 ~g~-~i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~~~~~n~--------------------~~--------------- 407 (599)
T PF06609_consen 364 AGA-VILGLLFSKIRHIKWQLIFGSVLMTAFCGAMAAVRPDNK--------------------NA--------------- 407 (599)
T ss_pred HHH-HHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHccCCCc--------------------ch---------------
Confidence 777 555888887776 55556676666655555544322111 00
Q ss_pred chhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 011514 376 QVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 436 (484)
Q Consensus 376 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~ 436 (484)
.....++.+++.+..........+-..|+++.|.+.|+..+++.+|+.+|..++..++..
T Consensus 408 -~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~I~~n 467 (599)
T PF06609_consen 408 -AIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNAIFTN 467 (599)
T ss_pred -HHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 133344667777777777777888889999999999999999999999999998877643
No 108
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.89 E-value=2e-20 Score=186.95 Aligned_cols=373 Identities=13% Similarity=0.034 Sum_probs=235.9
Q ss_pred HHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccC-----chhHhH
Q 011514 11 SHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYG-----RKAMLT 85 (484)
Q Consensus 11 ~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~G-----rk~~l~ 85 (484)
..+....+..++. +.....++.+.++.+ +++..+.+...+...++..+- +++|.++||++ ||+.++
T Consensus 29 ~~~~~~y~~qGl~-~l~~~~~~~~l~~~l-------g~s~~~i~~~~sl~~lpw~~K-~l~g~l~D~~~i~G~rRr~~l~ 99 (468)
T TIGR00788 29 AIGLQVLFVKGIA-GLMRLPLSPMLTDDL-------GLDGARYQRLVGLSSLGWALK-PFAGVMSDTFPLFGYTKRWYLV 99 (468)
T ss_pred HHHHHHHHHhhHH-HHhhhhhhHHHHHhc-------CCCHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCCCCccchHHHH
Confidence 3444455666666 555555666665433 566677788899999998884 55999999997 677777
Q ss_pred HHHHHH-HHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHH---HHHHHHHHhHHhHHH
Q 011514 86 LPLTLS-IIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAF---GILLGVLSASFVCGT 161 (484)
Q Consensus 86 ~~~~~~-~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~---~~~~~~~~~g~~ig~ 161 (484)
++.++. .+.....+..++. .....+..++.+++. +...++..++..|..+ |++.... +......++|.++|+
T Consensus 100 ~~~~l~~~~~~~~l~~~~~~--~~~~~~~~~l~~~~~-a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~ 175 (468)
T TIGR00788 100 LSGLLGSAILYGLLPGKVSS--AKVAAAFIFLAALAK-ALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISS 175 (468)
T ss_pred HHHHHHHHHHHHhcccccch--HHHHHHHHHHHHHHH-HHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHH
Confidence 777666 3444444443441 233344778888654 6777899999999998 5544433 333333457888888
Q ss_pred HhhHh----hhhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHH
Q 011514 162 LAARF----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRD 237 (484)
Q Consensus 162 ~l~~~----l~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (484)
.+++. .+|+..|++.+.+.++. .....++||++.....+.+++ +............+...+..++
T Consensus 176 ~l~G~l~~~~~~~~~f~~~a~l~ll~-~~~~~~~~E~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~ 244 (468)
T TIGR00788 176 LLGGPLLDKTLTRILFLITAALLLLQ-LFVSNLSKERRAFVRPRIGTY----------LEMNMALLTLGVLANVKVQILG 244 (468)
T ss_pred HHHHHHHHhcCcchHHHHHHHHHHHH-HHHHHhccccccccccccccc----------chhhhhhhhhhHHHHHHHHHHH
Confidence 77776 47999999988777766 444566788642111110000 0000000000000000111233
Q ss_pred HHHHhhccchhHHHHHHHHH-HhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHH
Q 011514 238 LICLLRSSVTLSQAAVVAFF-SGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLL 316 (484)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~ 316 (484)
..+ ..++|.++...+..++ +........... .+.++.+|+++.+.|......+++.+++. .+.+++.+|++.|+.+
T Consensus 245 l~~-~l~~~~i~~~l~fifl~~~~~~~~~~~~f-~~~~~~lG~s~~~~G~~~~~~~v~~i~g~-~~~~~~~~~~~~r~~l 321 (468)
T TIGR00788 245 LRG-AIQLLEIAKPLIFIFLSYANLPGASGSVF-CATTQCLPGGPSFSGMSKVVGNLGSLCGV-GGYDRFLKTFPYRLLF 321 (468)
T ss_pred HHH-HHhcHHHHHHHHHHHHHHhhcCCCCceeE-EEEcccCCCCcchhhhHHHHHHHHHHHHH-HHHHHHHhhCCHHHHH
Confidence 333 3456777765555555 222222211111 13335579999999999999999999888 6668888999999999
Q ss_pred HHhHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHH
Q 011514 317 SLGLFAACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFR 396 (484)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 396 (484)
.++.++.+++..........+... . ..+....+.....+.+++.+.......
T Consensus 322 ~~~~~l~~~~~~~~~~l~~~~~~~-------------------~---------gi~~~~~~~~~~~l~~~~~g~~~~~~~ 373 (468)
T TIGR00788 322 GVTTLLYTLSSLFDLILVKRWNLA-------------------F---------GISDEVFVLGDSIIAEVLAQLKFMPFL 373 (468)
T ss_pred HHHHHHHHHHHhCceeeeeccccc-------------------c---------CCCCeeeeeehhHHHHHHHHHHHccHH
Confidence 999888887765543222111100 0 000000013344567777788888889
Q ss_pred HHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 011514 397 SIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFL 438 (484)
Q Consensus 397 ~~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~ 438 (484)
.++++..|++.+|+.+++.+++.++|..+++.++|.+.++.+
T Consensus 374 ~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 374 VLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred HHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 999999999999999999999999999999999999999873
No 109
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.88 E-value=3.6e-19 Score=171.18 Aligned_cols=358 Identities=14% Similarity=0.073 Sum_probs=272.7
Q ss_pred HHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccc----cCchh-HhHHH
Q 011514 13 LFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQ----YGRKA-MLTLP 87 (484)
Q Consensus 13 l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr----~Grk~-~l~~~ 87 (484)
--.+.+...+........+..+.+|. .++++...|.+..+.-+-.++..|+.|.++|| +||+| .++.+
T Consensus 17 Yg~gd~~~~~~~~~~~~yLl~fYTdv-------~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g 89 (467)
T COG2211 17 YGLGDFASNFAFGIVVLYLLFFYTDV-------FGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWG 89 (467)
T ss_pred hcchhhHHHHHHHHHHHHHHHHHhcc-------cCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHH
Confidence 34455555566666666666666554 47888899999999999999999999999995 78754 56678
Q ss_pred HHHHHHHHHHHHhccch---hhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCC-ccchhHHHHHHHHHHHhHHhHHHHh
Q 011514 88 LTLSIIPLAILAYRRSI---SFFYAYYALRTLTAMVCEGSINCLALAYVADNIS-ERQRASAFGILLGVLSASFVCGTLA 163 (484)
Q Consensus 88 ~~~~~i~~~~~~~~~~~---~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~ig~~l 163 (484)
.+..++.+.++..+++. ......++...+.+++- ...+....++.+|+++ ++||.+..++-+...++|..+...+
T Consensus 90 ~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~Y-T~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~ 168 (467)
T COG2211 90 AIPFAIVAVLLFITPDFSMTGKLIYALVTYMLLGLGY-TLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVL 168 (467)
T ss_pred hHHHHHHHHHHHcCCCcccCcchHHHHHHHHHHHHHH-HheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88889998888888752 23455666777777655 4444568888999986 7899999999999998886554322
Q ss_pred -----hH------hhhhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCC
Q 011514 164 -----AR------FLSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKI 232 (484)
Q Consensus 164 -----~~------~l~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (484)
.. ..||+..-.+.+++..+..+.+++..+|...+..+. +...+
T Consensus 169 ~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~--------------------------~~~~~ 222 (467)
T COG2211 169 FPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVVETQPT--------------------------KTGVK 222 (467)
T ss_pred HHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccC--------------------------ccccc
Confidence 21 247788888888888888888888888866533221 01123
Q ss_pred CchHHHHHHhhccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcc
Q 011514 233 PSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGE 312 (484)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~ 312 (484)
.++++.+..+++||.++..++..++...+.....+...+|.+..+|.++..............+++. ++.+++++|+|+
T Consensus 223 ~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~-~~~p~L~~~~gk 301 (467)
T COG2211 223 LKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGL-ILWPRLVKKFGK 301 (467)
T ss_pred ccHHHHHHHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHH-HhHHHHHHHhch
Confidence 4566667778899999999998888888888888889999999989888887666666666555555 666999999999
Q ss_pred hHHHHHhHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhh
Q 011514 313 AKLLSLGLFAACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFAT 392 (484)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 392 (484)
|++...+.++.+++.+.+.+.+.... ..+++..++.+++.+...
T Consensus 302 k~~~~~~~~~~~i~~~~~~f~~~~~~------------------------------------~l~~~~~~i~~~g~~~~~ 345 (467)
T COG2211 302 KKLFLIGLLLLAVGYLLLYFTPAGSV------------------------------------VLIVVALIIAGVGTGIAN 345 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCcch------------------------------------HHHHHHHHHHHHHhhccc
Confidence 99999999999999888887763322 001444457788889999
Q ss_pred hHHHHHHhcccC-------CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 011514 393 PSFRSIVSKQVG-------PNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGA 442 (484)
Q Consensus 393 ~~~~~~~~~~~p-------~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~ 442 (484)
+..+++++|.++ .+..|..+|....+..+|.+++..+.|++.+.. |+..
T Consensus 346 ~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~-Gyv~ 401 (467)
T COG2211 346 PLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAI-GYVP 401 (467)
T ss_pred cccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCC
Confidence 999999998764 345688999999999999999999999999987 5543
No 110
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.87 E-value=1.3e-19 Score=171.13 Aligned_cols=263 Identities=12% Similarity=0.097 Sum_probs=197.2
Q ss_pred HHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHh--------------------
Q 011514 107 FYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF-------------------- 166 (484)
Q Consensus 107 ~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~-------------------- 166 (484)
++.++++-++.|.+. +...+..++++++..++|++++.+++.+.++++|.++||.+++.
T Consensus 10 ~~~~l~~~f~~g~G~-~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~~~ 88 (310)
T TIGR01272 10 YVLFLGALFVLASGL-TILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANAEA 88 (310)
T ss_pred HHHHHHHHHHHHhhH-HHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhHHH
Confidence 788899999999654 88889999999999999999999999999999999999998874
Q ss_pred hhhHHHHHHHHHHHHHHHHHHH-HHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHHHHHHhhcc
Q 011514 167 LSTTSAFQAATIVSMLAAAYMR-VFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSS 245 (484)
Q Consensus 167 l~~~~~f~~~~~~~~i~~~~~~-~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (484)
..|+++|++.+.+..+..+... ..+||.+++++++ ..+ ++..+.++ ..++
T Consensus 89 ~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~~~~~~----------------~~~---------~~~~~~~~----~~~~ 139 (310)
T TIGR01272 89 AKVHTPYLLLAGALAVLAIIFAFLPLPELQEADVAR----------------VSS---------GDTTQKTS----AFQF 139 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCCCcccccc----------------ccc---------ccccchhh----HHhh
Confidence 2578999866655444443332 2234322111000 000 00000111 3445
Q ss_pred chhHHHHHHHHHHhchhhhhHHHHHHHHhhh--cCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHH
Q 011514 246 VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQ--FHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAA 323 (484)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~ 323 (484)
|.++...+..+++.....+...+.+.|+++. +|+++.+.+...+....+.++++ ++.+++.||+++++.+..+..+.
T Consensus 140 ~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr-~~~~~l~~r~g~~~~l~~~~~l~ 218 (310)
T TIGR01272 140 THLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGR-FIGSAVMPMISQGRYLAFNAFLA 218 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCHHHHHHHHHHHH
Confidence 7777777888888888899999999999864 69999999999999999999998 88899999999999888887777
Q ss_pred HHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhccc
Q 011514 324 CINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQV 403 (484)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 403 (484)
.++.++....+.... .+...+.+++.+..+|...+...+..
T Consensus 219 ~~~~~l~~~~~~~~~---------------------------------------~~~~~l~g~~~s~i~P~~~s~a~~~~ 259 (310)
T TIGR01272 219 VLLSIGAALTHGYVA---------------------------------------MWFVLALGLFNSIMFPTIFSLALNAL 259 (310)
T ss_pred HHHHHHHHHcCCHHH---------------------------------------HHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 776655544443323 33445788999999999999999888
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 011514 404 GPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGA 442 (484)
Q Consensus 404 p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~ 442 (484)
|+ +.+++.++. ....+|+.++|.+.|.+.|.. +.+.
T Consensus 260 ~~-~~~~asai~-~~~~~Gg~i~P~l~G~lad~~-g~~~ 295 (310)
T TIGR01272 260 GR-HTSQGSGIL-CLAIVGGAIVPLLQGSLADCL-GIQL 295 (310)
T ss_pred hh-hhhhhHHHH-HHHHhcchHHHHHHHHHHHhc-cchH
Confidence 84 466777775 677899999999999999976 5544
No 111
>PRK11462 putative transporter; Provisional
Probab=99.87 E-value=1.2e-18 Score=174.11 Aligned_cols=349 Identities=11% Similarity=0.001 Sum_probs=228.1
Q ss_pred HHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccc----cCchhH-hHHHHH
Q 011514 15 VTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQ----YGRKAM-LTLPLT 89 (484)
Q Consensus 15 ~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr----~Grk~~-l~~~~~ 89 (484)
++.+.......+....+..+..|.. ++++...|.+..+.-+-.++..|+.|.++|| +||||. ++.+.+
T Consensus 16 ~g~~~~~~~~~~~~~~l~~fyt~~~-------Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i 88 (460)
T PRK11462 16 MGDAASHIIFDNVMLYMMFFYTDIF-------GIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGAL 88 (460)
T ss_pred cchhhhhHHHHHHHHHHHHHHHHhh-------CCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHH
Confidence 3444445555555556666665543 7788889999999999999999999999996 688665 456777
Q ss_pred HHHHHHHHHHhccch---hhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCC-ccchhHHHHHHHHHHHhHHhHHHHhhH
Q 011514 90 LSIIPLAILAYRRSI---SFFYAYYALRTLTAMVCEGSINCLALAYVADNIS-ERQRASAFGILLGVLSASFVCGTLAAR 165 (484)
Q Consensus 90 ~~~i~~~~~~~~~~~---~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~ig~~l~~ 165 (484)
..+++..++...++. .....+.+..++..++. ........++.+|.++ +|||++..++...+..+|..+++.+..
T Consensus 89 ~~~i~~~llf~~p~~s~~~~~~y~~~~~~~~~~~~-t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~ 167 (460)
T PRK11462 89 PFGIVCVLAYSTPDLSMNGKMIYAAITYTLLTLLY-TVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMM 167 (460)
T ss_pred HHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHH-HHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 778777776655532 12334455555556544 4444568889999987 789999999999999888777765532
Q ss_pred h----h-------hhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCc
Q 011514 166 F----L-------STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPS 234 (484)
Q Consensus 166 ~----l-------~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (484)
. + +|+....+.+++..+.....+...+|.++.++ ++.+
T Consensus 168 plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~i~~~~~kE~~~~~~-------------------------------~~~~ 216 (460)
T PRK11462 168 PLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCFFTTKERVEAPP-------------------------------TTTS 216 (460)
T ss_pred HHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHhcceeccCCCc-------------------------------cCCC
Confidence 1 2 45655556565555555554444444321110 1123
Q ss_pred hHHHHHHhhccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchH
Q 011514 235 IRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAK 314 (484)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ 314 (484)
.++.++...+||.++......++.............+|.+...|. +...+.+.....+..+++. .+.+++.||+++|+
T Consensus 217 ~~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~-~~~~~~~l~~~~i~~iig~-~l~~~l~~r~gkk~ 294 (460)
T PRK11462 217 MREDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGT-PEVFVAFLTTYCVGNLIGS-ALAKPLTDWKCKVT 294 (460)
T ss_pred HHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCC-hHHHHHHHHHHHHHHHHHH-HHHHHHHHHhChHH
Confidence 566677788888888777666666666666666666666666554 3344566677777777777 77799999999988
Q ss_pred HHHHhHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhH
Q 011514 315 LLSLGLFAACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPS 394 (484)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 394 (484)
....+..+..+....+.+.+..... . .....++.+++.+...+.
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~---------~---------------------------~~~~~~l~g~~~~~~~~l 338 (460)
T PRK11462 295 IFWWTNALLAVISLAMFFVPMQASI---------T---------------------------MFVFIFVIGVLHQLVTPI 338 (460)
T ss_pred HHHHHHHHHHHHHHHHHHhchhHHH---------H---------------------------HHHHHHHHHHHHHHHHHH
Confidence 8765544433323333222221110 0 022223445555666666
Q ss_pred HHHHHhcccC-------CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 011514 395 FRSIVSKQVG-------PNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKG 441 (484)
Q Consensus 395 ~~~~~~~~~p-------~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~ 441 (484)
.+++..|..+ .+..|..++..+....+|..+++.+.|.+.+.. |+.
T Consensus 339 ~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~-Gy~ 391 (460)
T PRK11462 339 QWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYG-GYD 391 (460)
T ss_pred HHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCC
Confidence 6777777665 344566678888999999999999999999875 554
No 112
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.86 E-value=1.8e-18 Score=170.67 Aligned_cols=384 Identities=11% Similarity=0.035 Sum_probs=225.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhccccc-CchhHh
Q 011514 6 EIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQY-GRKAML 84 (484)
Q Consensus 6 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-Grk~~l 84 (484)
.+|.++.++...+...++.......+|.|+++.+ +.+..+.+.+.+.+.....++.++.|+++||+ ||||.+
T Consensus 7 ~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~l-------gls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~i 79 (493)
T PRK15462 7 QPRAIYYVVALQIWEYFSFYGMRALLILYLTNQL-------KYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAV 79 (493)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHH
Confidence 4667778888888889998888889999987643 44556678889999999999999999999999 999999
Q ss_pred HHHHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCcc--chhHHHHHHHHHHHhHHhHHHH
Q 011514 85 TLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISER--QRASAFGILLGVLSASFVCGTL 162 (484)
Q Consensus 85 ~~~~~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~ig~~ 162 (484)
.++.++..++.++++..++......+...++..| . |...+...++++|.+|++ +|.+++++.....++|..++|.
T Consensus 80 liG~il~~lg~lll~~~~~~~~~~~l~l~li~iG--~-G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~ 156 (493)
T PRK15462 80 MLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCG--Y-GLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPI 156 (493)
T ss_pred HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHh--c-ccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHH
Confidence 9999999999877765432111112222333334 2 455567788999999875 6999999999999999999999
Q ss_pred hhHhh----hhHHHHHHHHHHHHHHHHHHHHHcccCCCCC-CCCCCCCCccccccccc----CCCCCC-CCccCcccCCC
Q 011514 163 AARFL----STTSAFQAATIVSMLAAAYMRVFLKDDVPND-DDDDLTRPIITEETEGV----NQNESN-SPVKIPVCKKI 232 (484)
Q Consensus 163 l~~~l----~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~-~~~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~ 232 (484)
+.+.+ ||++.|.+.++.. +..+..+...++...+. ..+++..+......... -..... .-......++.
T Consensus 157 l~g~L~~~~Gw~~~F~iaaigm-~l~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (493)
T PRK15462 157 ACGYAQEEYSWAMGFGLAAVGM-IAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLVLLVATPALITVLFWKEW 235 (493)
T ss_pred HHHHHHhhhChHHHHHHHHHHH-HHHHHHHHHhhhhhccCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98874 8999999876543 33333333222111110 00000000000000000 000000 00000000000
Q ss_pred Cc-------------hHHHH-HHh--hccchh---HHHHHHHHHHhchhhhhHHHHHHHHhhhc-----CcChhhHHHHH
Q 011514 233 PS-------------IRDLI-CLL--RSSVTL---SQAAVVAFFSGLSEGGMQASFLYFLKAQF-----HFNKNQFADLM 288 (484)
Q Consensus 233 ~~-------------~~~~~-~~~--~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----g~~~~~~~~~~ 288 (484)
.. +.... +.. .+++++ ..+.+...+++..+....+.+..|.++.. |++- ..+++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~er~r~~~~~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~i-p~~~~q 314 (493)
T PRK15462 236 SVYALIVATIIGLGVLAKIYRKAENQKQRKELGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVNRDMFGYTV-PTAMFQ 314 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccchhcceee-CHHHHH
Confidence 00 00000 000 011222 22333344444445555556666666542 3332 246778
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhcc--h-----HHHHHhHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhh
Q 011514 289 LIAGLAGTISQLLFMPLLAPILGE--A-----KLLSLGLFAACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQIS 361 (484)
Q Consensus 289 ~~~~~~~~~~~~~~~~~l~~~~g~--~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~ 361 (484)
+...+..++.++++ .++=.|.++ | .-..+|+++.+++++.+.+...... +++.++
T Consensus 315 slNp~~ii~l~P~~-a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~-----------------~~~~~s 376 (493)
T PRK15462 315 SINAFAVMLCGVFL-AWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSA-----------------MYGHSS 376 (493)
T ss_pred hHhHHHHHHHHHHH-HHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcC-----------------CCCCcC
Confidence 88888888887555 334333311 1 1256777788888777754322111 001122
Q ss_pred HHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHH-HHHHHHHHHHHH
Q 011514 362 VHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGIS-SFANIVSPLIFS 431 (484)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~-~lg~~~gp~i~g 431 (484)
.++ ++....+.+++.-...|...+.+++..|++.+|+.+|...... .+|+.++..+.+
T Consensus 377 ~~w------------l~~~~~~~t~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~g~~~~ 435 (493)
T PRK15462 377 LPL------------MVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGVIAD 435 (493)
T ss_pred HHH------------HHHHHHHHHHHHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222 1455567889999999999999999999999999999985532 444444444443
No 113
>PTZ00207 hypothetical protein; Provisional
Probab=99.86 E-value=4.5e-18 Score=170.62 Aligned_cols=373 Identities=12% Similarity=0.049 Sum_probs=241.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHHHHHHHHHHHhc------cchhhHHHHHHHHHHhhhh
Q 011514 47 SLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYR------RSISFFYAYYALRTLTAMV 120 (484)
Q Consensus 47 ~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~i~~~~~~~~------~~~~~~~~l~~~r~l~G~~ 120 (484)
+.+..+.+++.++.. .....+++.|+++||+|||+++.++.++..+++++++++ .+ ++.+.+.|++.|++
T Consensus 58 gls~~~l~~i~svg~-~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s---~~~l~l~r~l~G~G 133 (591)
T PTZ00207 58 NLTQRDLSTITTVGI-AVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGS---VVRLSVYNGLMTLG 133 (591)
T ss_pred CcCHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCc---HHHHHHHHHHHHHH
Confidence 344445566666533 334567789999999999999999999999999999987 46 88999999999975
Q ss_pred ccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhH-HHHhhHhh--hhHHHHHHHHHHHHHHHHHHHHHcccCCCC
Q 011514 121 CEGSINCLALAYVADNISERQRASAFGILLGVLSASFVC-GTLAARFL--STTSAFQAATIVSMLAAAYMRVFLKDDVPN 197 (484)
Q Consensus 121 ~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~i-g~~l~~~l--~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~ 197 (484)
. +...+.....+.+++| ++||++.|+.....++|..+ +++..+.+ +|+..|++.+++..+..++...++++++..
T Consensus 134 ~-~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~~~~~~fl~l~vl~~vv~ll~~~~vr~p~~~ 211 (591)
T PTZ00207 134 C-MLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFSDNTSAYFFFLMSFALVVGILAIVFMRLPPFH 211 (591)
T ss_pred H-HHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhheeCCcch
Confidence 5 6666778888999996 78999999999999999864 56555554 788888888888888877777777766532
Q ss_pred CC--CC---CCCCCc-----------------cc--------------------------------------c-------
Q 011514 198 DD--DD---DLTRPI-----------------IT--------------------------------------E------- 210 (484)
Q Consensus 198 ~~--~~---~~~~~~-----------------~~--------------------------------------~------- 210 (484)
.. ++ +++++. .. .
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~v~~~lll~~p 291 (591)
T PTZ00207 212 LTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLPLQGALVAYLKLGSNFKVGFAVTVIVLTVIFP 291 (591)
T ss_pred hhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 11 00 111110 00 0
Q ss_pred ---------cccccC-C--CCCCCC-c-----c-Ccc------cC-CCCchHHHHHHhhccchhHHHHHHHHHHhchhhh
Q 011514 211 ---------ETEGVN-Q--NESNSP-V-----K-IPV------CK-KIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGG 264 (484)
Q Consensus 211 ---------~~~~~~-~--~~~~~~-~-----~-~~~------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (484)
+....+ + .++.+. + . .+. .+ ..+...+.+....++..+|.++...++.......
T Consensus 292 ~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~t~~q~l~~~d~Wll~~~~~cg~g~gl~ 371 (591)
T PTZ00207 292 FMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDVDYIAPQFQETFIEGLKTARLWCLLWSIFCCVGAHFV 371 (591)
T ss_pred HHhhhHHHhccCCcCCCccccccccccccccccccccccccccccCCCCCCcchHHHHHhchhHHHHHHHHHHhhCchhe
Confidence 000000 0 000000 0 0 000 00 0011112344455678899999999998877777
Q ss_pred hHHHHHHHHhhhcCcChhh--HHHHHHHHHHHHHHHHHHHHHHhhh----hh-----cchHHHHHhHHHHHHHHHHHhhc
Q 011514 265 MQASFLYFLKAQFHFNKNQ--FADLMLIAGLAGTISQLLFMPLLAP----IL-----GEAKLLSLGLFAACINMFICSIS 333 (484)
Q Consensus 265 ~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~----~~-----g~~~~~~~~~~~~~~~~~~~~~~ 333 (484)
....+.+..+..-|.+.++ ...+.++.++.+.++. +.+|.++. |. .|.-.+.+..+ +.++.+++.+.
T Consensus 372 ~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GR-l~~g~~~~~~~~~~~~~r~prt~~l~~~~~-~~~~~lll~~~ 449 (591)
T PTZ00207 372 IIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGR-LCMSYFEIWSQKRRAEDRVPITIALFIPSV-CIITMLTLFLT 449 (591)
T ss_pred eeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhH-HHHHHHHHHHHhhccccccchhHHHHHHHH-HHHHHHHHHHH
Confidence 7777777666543652322 2226788888888888 76677662 21 11112333333 55555555554
Q ss_pred cchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHH
Q 011514 334 WSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQG 413 (484)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g 413 (484)
.+... +.+..++.|++.|...+.....++|.+. ++-|+-+-
T Consensus 450 ~p~~~--------------------------------------L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN 490 (591)
T PTZ00207 450 LPKAA--------------------------------------LPLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYN 490 (591)
T ss_pred CCccH--------------------------------------hHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhh
Confidence 43122 2556668999999999999999999999 88898888
Q ss_pred HHHHHHHHHHHHH-HHHHHHHHHhhhcCCCCcc-----cCchHHHHHHHHHHHHHHHHH
Q 011514 414 CISGISSFANIVS-PLIFSPLTALFLSKGAPFN-----FPGFSIMCIGLASMVAFIQSL 466 (484)
Q Consensus 414 ~~~~~~~lg~~~g-p~i~g~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 466 (484)
+.....-+|..+- -.++|.+||.-...+.... -....|++.+++...+.+...
T Consensus 491 ~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~ 549 (591)
T PTZ00207 491 FCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITST 549 (591)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHh
Confidence 8888888887766 6788889987531111100 112356666666655555443
No 114
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.85 E-value=3.5e-17 Score=153.17 Aligned_cols=357 Identities=14% Similarity=0.085 Sum_probs=257.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHhhhhhcccccC-----chhHhH-HHHHHHHHHHHHHHhc-----c--------chhh
Q 011514 46 CSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYG-----RKAMLT-LPLTLSIIPLAILAYR-----R--------SISF 106 (484)
Q Consensus 46 ~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~G-----rk~~l~-~~~~~~~i~~~~~~~~-----~--------~~~~ 106 (484)
.+++....+.+.++..+.+. ..+.+|..||+.+ ||..++ .|.+....+..+.+++ . .+..
T Consensus 10 L~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~~g 88 (403)
T PF03209_consen 10 LGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFWLG 88 (403)
T ss_pred hccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccHHH
Confidence 37788888888888888766 5899999999998 776554 6666666665555542 2 1111
Q ss_pred HHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHhh-h----hHH--HHHHHHHH
Q 011514 107 FYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL-S----TTS--AFQAATIV 179 (484)
Q Consensus 107 ~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l-~----~~~--~f~~~~~~ 179 (484)
.......-.+.|++. ........++++|..|||+|+++.++.....-+|.+++..+.+.+ . .|. .+...+++
T Consensus 89 ~~~a~l~F~l~G~G~-~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~a~i 167 (403)
T PF03209_consen 89 LALAALAFLLYGLGV-HASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGVALI 167 (403)
T ss_pred HHHHHHHHHHHHhhH-hHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHH
Confidence 234445566778755 555567999999999999999999999999999999998887763 1 122 22223323
Q ss_pred HHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHHHHHHhhccchhHHHHHHHHHHh
Q 011514 180 SMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSG 259 (484)
Q Consensus 180 ~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (484)
.++..++..+ -.|++..+..+ ..+++++++++.++.+..+|..++.....++..
T Consensus 168 ~~~l~~ia~w-g~E~r~~~~~~-------------------------~~~~~~~~f~~a~~~~~~~~~a~~f~~fl~l~t 221 (403)
T PF03209_consen 168 ALLLNLIALW-GQEPRRSRRAA-------------------------AAERPRPPFREAWRQVWASPQARRFFVFLFLGT 221 (403)
T ss_pred HHHHHHHHHH-hcccCCccccc-------------------------CCCCCCccHHHHHHHHHhCCChhHHHHHHHHHH
Confidence 2222222222 23332222111 112344577788888889999999999999988
Q ss_pred chhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHh-hhhhcchHHHHHhHHHHHHHHHHHhhc---cc
Q 011514 260 LSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLL-APILGEAKLLSLGLFAACINMFICSIS---WS 335 (484)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~ 335 (484)
+++..-...+-+|--+.+|++..|...+....+.+..++. ...+++ .+|.++++...++.....+++..+... .+
T Consensus 222 ~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~-~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~ 300 (403)
T PF03209_consen 222 LAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGM-LLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGS 300 (403)
T ss_pred HHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 8888888889999999999999999999999999988887 444554 447888888888888877776665443 33
Q ss_pred hhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHH
Q 011514 336 AWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCI 415 (484)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~ 415 (484)
.+. +....+++|++.+.......+...+..++++.|...|..
T Consensus 301 ~~~--------------------------------------~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~W 342 (403)
T PF03209_consen 301 PWL--------------------------------------FRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAW 342 (403)
T ss_pred chH--------------------------------------HHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHH
Confidence 444 255666899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCchHHHHHHHHHHHHHHHHHHhc
Q 011514 416 SGISSFANIVSPLIFSPLTALFLSKG--APFNFPGFSIMCIGLASMVAFIQSLMMS 469 (484)
Q Consensus 416 ~~~~~lg~~~gp~i~g~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (484)
...+.++..++..++|.+.|...... .+....+.+|.+-++..+.+.+...++.
T Consensus 343 GaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll~~l~ 398 (403)
T PF03209_consen 343 GAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVLLGRLD 398 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999998752221 1333445567777777777666655543
No 115
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.84 E-value=1.3e-19 Score=174.38 Aligned_cols=396 Identities=17% Similarity=0.207 Sum_probs=257.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCc-hhHh
Q 011514 6 EIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGR-KAML 84 (484)
Q Consensus 6 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Gr-k~~l 84 (484)
.+|.+++..+..++.....+++.|....|.++. |.+.+....|++.++..++.+++++.+|.++.|.++ |+.+
T Consensus 32 ~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~l------D~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pl 105 (488)
T KOG2325|consen 32 NWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKL------DPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPL 105 (488)
T ss_pred chHhHHHHHHHHHHHhhhheEEEeecchhhhhc------CCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCH
Confidence 367788888999999999999999999999774 113334567999999999999999999999999997 8999
Q ss_pred HHHHHHHHHHHHHH-Hhccchh-hHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHH
Q 011514 85 TLPLTLSIIPLAIL-AYRRSIS-FFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTL 162 (484)
Q Consensus 85 ~~~~~~~~i~~~~~-~~~~~~~-~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~ 162 (484)
+.|.++..++.+++ .+..-.+ ..+.++++|++.|++. +.. ....+|+++....++|.|+++....+..+|.++||.
T Consensus 106 i~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~-~n~-a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~ 183 (488)
T KOG2325|consen 106 IVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGV-GNF-AVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPT 183 (488)
T ss_pred HHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCc-ccH-HHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHH
Confidence 99999999999998 4432222 4689999999999754 555 479999999999999999999999999999999998
Q ss_pred hhHhh------h-----------hHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCcc
Q 011514 163 AARFL------S-----------TTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVK 225 (484)
Q Consensus 163 l~~~l------~-----------~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (484)
++..+ | +..+-|+.+++.++..+...++++|.++...+++...+ +++ +.+
T Consensus 184 ~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~~~~~~~~~------------~~~-~~~ 250 (488)
T KOG2325|consen 184 IQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGIIDKKKRSV------------EEE-KSD 250 (488)
T ss_pred HHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccCccccccccc------------hhh-ccc
Confidence 87653 1 25678888889999988888889998776544311000 000 000
Q ss_pred CcccCCCCchHHHHHHhhccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHH----HHHHHHHHHHHHHHH
Q 011514 226 IPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFAD----LMLIAGLAGTISQLL 301 (484)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~~~~~~~~~~~~~~~ 301 (484)
.+.. +..+. + .+..+.+++..+...+......+..+......++++.+++-. .+++.++...... +
T Consensus 251 ~~~~-~~~~~-d-------~~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~~~gi~~~~~g~ls~~~~-l 320 (488)
T KOG2325|consen 251 IEKV-KKPKL-D-------WVAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVLYNGITLSISGILSVILL-L 320 (488)
T ss_pred hhhh-ccCCh-h-------HHHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHHhhhhHHHHHHHHHHHHH-H
Confidence 0000 00011 1 123344555555566666666777777777778888777443 3344444444333 2
Q ss_pred HHHHhh-hhhcchHHHHHhHHHHHHHHHHHhhc--cch-hhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccch
Q 011514 302 FMPLLA-PILGEAKLLSLGLFAACINMFICSIS--WSA-WVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQV 377 (484)
Q Consensus 302 ~~~~l~-~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 377 (484)
...... .++.+|+.+..+.+.......+.... ... ....++.. -....+ .-.-|+..+.....+. .+
T Consensus 321 ~~~f~~l~~i~~r~~~~~g~l~~f~~~~i~~yp~~~~s~pv~~~~~~----~~~~~~----~~y~wc~~~~~v~~~~-~l 391 (488)
T KOG2325|consen 321 LYIFTRLGKIDKRRIILLGFLIFFLSYYIFTYPWGFYSGPVQPYNTT----YAGCDF----EEYSWCDTTTAVPLIL-YL 391 (488)
T ss_pred HHHHHHhhhhccceeeeehHHHHHHhhheeeeecccccccccccccc----ccCcCc----ccchhhccCcccChhh-he
Confidence 212222 23344555555533333333222111 110 00000000 000000 0011111110000000 01
Q ss_pred hhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 011514 378 PYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGA 442 (484)
Q Consensus 378 ~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~ 442 (484)
....+++|.+.........+..+|...|.+++..+|+.+..+..+..++|.+...++... ++.+
T Consensus 392 ~~~i~~~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~-g~~~ 455 (488)
T KOG2325|consen 392 ISFIVVFGIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLS-GPRP 455 (488)
T ss_pred eehhheeccccccccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhc-CccH
Confidence 223345666666677788899999999999999999999999999999999999999886 6665
No 116
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.83 E-value=6.8e-20 Score=160.08 Aligned_cols=353 Identities=12% Similarity=0.055 Sum_probs=234.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhhcccc-cCchhHhHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchh
Q 011514 47 SLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQ-YGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSI 125 (484)
Q Consensus 47 ~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr-~Grk~~l~~~~~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~ 125 (484)
++......++.++|.....+...+.|++.|| +|-|..-++-+....++.++++...-.+.+|.+..+|++.|++++...
T Consensus 75 ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlA 154 (459)
T KOG4686|consen 75 NIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLA 154 (459)
T ss_pred ccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHHHHHHHHhhheeeccCchhhh
Confidence 5555566788999999999999999999997 577766666666666777766654333348999999999999876555
Q ss_pred hHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHH----HHhhHhh------------hhHHHHH-HHHHHHHHHHHHHH
Q 011514 126 NCLALAYVADNISERQRASAFGILLGVLSASFVCG----TLAARFL------------STTSAFQ-AATIVSMLAAAYMR 188 (484)
Q Consensus 126 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig----~~l~~~l------------~~~~~f~-~~~~~~~i~~~~~~ 188 (484)
.+.+.|..-|+..+|.+.++|+......+|..+- |.+.... |-...+- ..+...++.++..-
T Consensus 155 -VaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~~~~~~~ghT~LG~~l~~~~~tc~~slical~lg 233 (459)
T KOG4686|consen 155 -VAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMGRMFPGVGHTLLGLWLCFEVKTCKQSLICALSLG 233 (459)
T ss_pred -hhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 5789999999999999999999999888886543 2222221 1111111 11111222211111
Q ss_pred HHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHHHHHHhhccchhHHHHHHHHHHhchhhhhHHH
Q 011514 189 VFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQAS 268 (484)
Q Consensus 189 ~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (484)
.-|++.+..-+ .++.. ..++.+..+.++ -.|.+|.+.++.+++..+...+.+.
T Consensus 234 --~~D~rAerilh----------------~e~g~---~Ge~pkLtdv~~------f~ppfw~~~iicv~yyva~fPFi~l 286 (459)
T KOG4686|consen 234 --LSDDRAERILH----------------LEEGF---LGEEPKLTDVNT------FYPPFWVLVIICVLYYVAWFPFITL 286 (459)
T ss_pred --hhhhHHHHHHh----------------hhcCc---ccCCcccccccc------cCccHHHHHHHHHHHHHHHHHHhhh
Confidence 11111110000 00000 000111111111 2377888888889998888899999
Q ss_pred HHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHH-HHHHHHHHhhccchhhHHHhhhhHH
Q 011514 269 FLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFA-ACINMFICSISWSAWVIKIFFNKVF 347 (484)
Q Consensus 269 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (484)
-|.++++++|+|+.+++.+.+.......+.+ .+.|.++||.|++.....+..+ ...+-..+.++.-. .
T Consensus 287 g~~fF~~rfGlS~~~a~~i~s~vy~Isav~s-pvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft~ls-P--------- 355 (459)
T KOG4686|consen 287 GPMFFQKRFGLSAVSAGNILSTVYGISAVLS-PVFGAISDKYGFNLWWVASACILTLLGHSGLFFTFLS-P--------- 355 (459)
T ss_pred hHHHHHHhhCCChhhccchhhhhhhhhhhhh-hhHHHhHhhhcceehhHHHHHHHHHHHhhhHHhhhcc-H---------
Confidence 9999999999999999999998888888888 5559999999997765544433 33333333222111 1
Q ss_pred HHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHH
Q 011514 348 KLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSP 427 (484)
Q Consensus 348 ~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp 427 (484)
...+.+.|..........+..+...+|+++.|+++|..+.++++|-.+.|
T Consensus 356 ------------------------------y~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~ 405 (459)
T KOG4686|consen 356 ------------------------------YTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIP 405 (459)
T ss_pred ------------------------------HHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHh
Confidence 23445777877777777888999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHHHHHHhccCC
Q 011514 428 LIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSHTP 472 (484)
Q Consensus 428 ~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (484)
.+.|.+.|.-+++.. ....|+..+...+....+.+...++.
T Consensus 406 Iiag~i~d~~g~y~~----le~ffl~~~~~aL~svgil~~~N~kq 446 (459)
T KOG4686|consen 406 IIAGFIADGDGSYDN----LEAFFLIIGLMALTSVGILFYLNKKQ 446 (459)
T ss_pred hhhheeecCCCchhh----HHHHHHHHHHHHHHHHHHHhheeccc
Confidence 999999998644432 22234444445555555555555443
No 117
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.71 E-value=1.3e-14 Score=138.66 Aligned_cols=384 Identities=13% Similarity=0.050 Sum_probs=236.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhccccc-CchhHh
Q 011514 6 EIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQY-GRKAML 84 (484)
Q Consensus 6 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-Grk~~l 84 (484)
..|.++.++...+-..+++.-....+..|++.....| .+.+...+.-+.+.|..-.-+...+.|+++||+ |+|+.+
T Consensus 19 ~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~g---Lg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI 95 (498)
T COG3104 19 QPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDG---LGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTI 95 (498)
T ss_pred CCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhcccc---CCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHH
Confidence 3677889999999999999877777778877765322 455555556667777766667788899999996 999999
Q ss_pred HHHHHHHHHHHHHHHhcc--chhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCcc--chhHHHHHHHHHHHhHHhHH
Q 011514 85 TLPLTLSIIPLAILAYRR--SISFFYAYYALRTLTAMVCEGSINCLALAYVADNISER--QRASAFGILLGVLSASFVCG 160 (484)
Q Consensus 85 ~~~~~~~~i~~~~~~~~~--~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~ig 160 (484)
.+|.++..+|.++.+... + ...++++-.+.+++. |..-|...+++.|.+|++ +|...+++..++.++|.+++
T Consensus 96 ~lGail~~iGh~~L~~~~~~~---~~gl~i~L~~I~iG~-Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~ 171 (498)
T COG3104 96 VLGAILMAIGHLVLAISSVSG---PGGLYIGLALIIVGT-GLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIA 171 (498)
T ss_pred HHHHHHHHHHHHHHhcccccc---ccHHHHHHHHHHhcc-ccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHH
Confidence 999999999999999884 5 566777888888644 888899999999999854 47788889999999999999
Q ss_pred HHhhHhh----hhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCC-----CCcccccc--------c---ccCCCCC
Q 011514 161 TLAARFL----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLT-----RPIITEET--------E---GVNQNES 220 (484)
Q Consensus 161 ~~l~~~l----~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~-----~~~~~~~~--------~---~~~~~~~ 220 (484)
|.+.+.+ ||+..|.++++-..+.+ +.+...|........+.+. ........ . .....++
T Consensus 172 p~i~~~~~~~~g~~~gF~~aavGm~~gl-~~f~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 250 (498)
T COG3104 172 PIITGLLAINYGWHVGFGLAAVGMIIGL-VIFLLGRRHVKGIGGVPDPNPLSFNFLLPVLGGLVVMILAALLTLLLNQNT 250 (498)
T ss_pred HHHHHHHHHhhCHHHHHHHHHHHHHHHH-HHHHHccchhcCCCCCCCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9887764 78888888885444443 3333333222111111000 00000000 0 0000000
Q ss_pred CCCcc------------CcccCCCCchHHHHHHhhccchhHHHHHHHHHHhchhhhhHHHHHHHHhhh-----cCcChhh
Q 011514 221 NSPVK------------IPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQ-----FHFNKNQ 283 (484)
Q Consensus 221 ~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~ 283 (484)
-.... .+..+..+...+ .+|-.....+++...+++..+....+.+..|..+. +|++. .
T Consensus 251 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~e----r~r~~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~v-p 325 (498)
T COG3104 251 FSGVLLVISILIAIIYFAEAFRSPKVFDE----RRRLLAAIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGFEV-P 325 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCccHHH----HHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHhhcccccceec-C
Confidence 00000 000000000001 00111122333444444444444445555555443 23322 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhcch-------HHHHHhHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHhhh
Q 011514 284 FADLMLIAGLAGTISQLLFMPLLAPILGEA-------KLLSLGLFAACINMFICSISWSAWVIKIFFNKVFKLLLLSFIT 356 (484)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 356 (484)
.++..+...+.-++.++++ .++..|.+++ .-..+++.++..+++++........ -+
T Consensus 326 ~~~fQslNp~~Iii~~pI~-a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~----------------~~ 388 (498)
T COG3104 326 PAWFQSLNPFFIILFSPIL-AALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFG----------------GP 388 (498)
T ss_pred HHHHHhhCHHHHHHHHHHH-HHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhc----------------CC
Confidence 3677788888777777555 4444443222 2344556666666665544311000 00
Q ss_pred hhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHH
Q 011514 357 RKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFS 431 (484)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g 431 (484)
++..++|++ +...++.+++.-+..|...+++.+..|+...+..++........++.++..+.+
T Consensus 389 ~~~~s~~~l------------il~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~ 451 (498)
T COG3104 389 SGLVSVWWL------------VLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAG 451 (498)
T ss_pred CCCcCHHHH------------HHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecc
Confidence 123344433 445568889999999999999999999988888888888877777777766665
No 118
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.67 E-value=3.5e-14 Score=133.34 Aligned_cols=342 Identities=12% Similarity=-0.022 Sum_probs=229.9
Q ss_pred hHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHHHHHHHHHHHhccch--
Q 011514 27 VVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSI-- 104 (484)
Q Consensus 27 ~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~i~~~~~~~~~~~-- 104 (484)
....+..+.+++. | +....-|..-+|.+.+....+++-|+.|++|-|...+++..+-.++..+-..+...
T Consensus 63 ~ya~i~n~~~~~Y--g------s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v 134 (480)
T KOG2563|consen 63 QYAPINNYVNSFY--G------SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFV 134 (480)
T ss_pred eehhHHHHHHHHh--c------chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccc
Confidence 3345556666664 3 22344588889999999999999999999999999999999999999887766443
Q ss_pred -hhHH--HHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHh----------hhhHH
Q 011514 105 -SFFY--AYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF----------LSTTS 171 (484)
Q Consensus 105 -~~~~--~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~----------l~~~~ 171 (484)
+.++ ....+..+.+... -.....-.....-|+++++|..+..+-..++.+|..+|.++... ..|..
T Consensus 135 ~~~f~~~l~~~Gq~iaa~Aq-~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~~~~~~~~~~~ 213 (480)
T KOG2563|consen 135 PPLFRRPLTHTGQSIAAAAQ-PFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLF 213 (480)
T ss_pred cccchhhhhHHhHHHHHHhh-hHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCCCCcchhHHHH
Confidence 2244 6667777777533 44433334566778999999999999888888887777665533 23433
Q ss_pred --HHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHHHHHHhhccchhH
Q 011514 172 --AFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLS 249 (484)
Q Consensus 172 --~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (484)
.|+....+..+.+.+..+..++.|+.++... ....+..++.+..+..++|+++.
T Consensus 214 ~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s------------------------~~~~~~~~f~~si~~~~~n~~F~ 269 (480)
T KOG2563|consen 214 FTLFLGVECLAALLLALVLFVFTKKPPTPPSAS------------------------QAALQDASFPKSIKSCFKNRQFI 269 (480)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchh------------------------HhhhhcCcHHHHHHHHHcCccHH
Confidence 3554444544444455454555444332210 00011234666666688889988
Q ss_pred HHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcch-HHHHHhHHHHHHHHH
Q 011514 250 QAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEA-KLLSLGLFAACINMF 328 (484)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~-~~~~~~~~~~~~~~~ 328 (484)
...+++.+....+.+..+.+..-+... |++....|+......+++++++ .+++.+.||.+.- ...++......++..
T Consensus 270 il~~~ygi~~g~F~~l~~~l~~~l~~s-gY~~~~aG~ig~l~iv~Gmlga-~~~gii~Dktk~fk~~~~v~~~~~~v~~~ 347 (480)
T KOG2563|consen 270 ILAICYGIGLGLFNSLSTLLNLALCPS-GYEGVFAGYIGALMIVAGMLGA-LASGIIADKTKKFKLTTLVLYLFALVGTL 347 (480)
T ss_pred HHHHHHhhhHHHHHHHHHHhhhccccc-cCCccccchhHHHHHHHHHHHH-HHHHhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 888777776666666666555444444 7777788888888888999998 8889999998764 444444444444422
Q ss_pred HHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCch
Q 011514 329 ICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQ 408 (484)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~ 408 (484)
.+......+. . ...+.....++|++.....|....+..|..-|..-
T Consensus 348 ~l~~~t~~~~---------------------~-------------~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E 393 (480)
T KOG2563|consen 348 MLLTCTLFLG---------------------D-------------SVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAE 393 (480)
T ss_pred HHHHhhccCC---------------------c-------------eEehhhhHHHHHHhhcCCCCcceeeeeeeccccCC
Confidence 2221111110 0 00023445577888888889888888888877888
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 011514 409 GKAQGCISGISSFANIVSPLIFSPLTALF 437 (484)
Q Consensus 409 g~~~g~~~~~~~lg~~~gp~i~g~l~~~~ 437 (484)
++..|+.+..+++-+++-..+.+...+..
T Consensus 394 ~tSsGll~~~gq~f~~~~~~~~~~~~~~~ 422 (480)
T KOG2563|consen 394 GTSSGLLNLSGQIFGVILVFIMGILAEDL 422 (480)
T ss_pred cccceeEEeehhHHHHHHHHHHHHHhhcc
Confidence 89999999999988888888888887765
No 119
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.64 E-value=2.4e-17 Score=165.43 Aligned_cols=407 Identities=14% Similarity=0.162 Sum_probs=2.4
Q ss_pred HHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHHHH
Q 011514 13 LFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSI 92 (484)
Q Consensus 13 l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~ 92 (484)
+++..++.....+.....+..+-+.+ +++..+.|++.+.+-++..+..++..++.+|..|-|.+-.|.++.+
T Consensus 8 ~~~~~~~q~~~~g~~~~~lttiErRF--------~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~ 79 (539)
T PF03137_consen 8 LCLLGLFQMMVSGYVNSSLTTIERRF--------GLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMG 79 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHH
Confidence 34444455444455555555554443 8888899999999999999999999999999888888889999999
Q ss_pred HHHHHHHhcc----c-------------------------------------------hhhHHHHHHHHHHhhhhccchh
Q 011514 93 IPLAILAYRR----S-------------------------------------------ISFFYAYYALRTLTAMVCEGSI 125 (484)
Q Consensus 93 i~~~~~~~~~----~-------------------------------------------~~~~~~l~~~r~l~G~~~~g~~ 125 (484)
++++++++-+ . ...++.++++.++.|+++ ...
T Consensus 80 ~g~~l~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~-~pl 158 (539)
T PF03137_consen 80 LGSLLFALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGA-TPL 158 (539)
T ss_dssp ------------------------------------------------------------------------SSS-----
T ss_pred HHHHHHhccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccc-cCC
Confidence 9988877521 0 012467889999999755 778
Q ss_pred hHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHhh--------------------------hhHHHHHHHHHH
Q 011514 126 NCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL--------------------------STTSAFQAATIV 179 (484)
Q Consensus 126 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l--------------------------~~~~~f~~~~~~ 179 (484)
++...+|+-|.+++++-+..+|+..+...+|..+|-++|+.. .|..-|.+.+.+
T Consensus 159 ~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~ 238 (539)
T PF03137_consen 159 YTLGITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGIL 238 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccceeeeeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999888887651 145556667766
Q ss_pred HHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCC-CCCCccCcccCCCCchHHHHHHhhccchhHHHHHHHHHH
Q 011514 180 SMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNE-SNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFS 258 (484)
Q Consensus 180 ~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (484)
.++..+.... .|+..+..++..+.++....+.++.++.+ ++++......+..+++....+.+.+||.+....+.....
T Consensus 239 ~~l~aipl~~-FPk~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~ 317 (539)
T PF03137_consen 239 LFLSAIPLFF-FPKKLPGTSERQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFE 317 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHc-CCccCCCcccccchhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHH
Confidence 6665555544 45443333111111111000000000000 000000111122334445556688899999999999999
Q ss_pred hchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhc--chHHHHHhHHHHHHHHHH---Hhhc
Q 011514 259 GLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILG--EAKLLSLGLFAACINMFI---CSIS 333 (484)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g--~~~~~~~~~~~~~~~~~~---~~~~ 333 (484)
.+...++.++.|-|++..++.++.+++.+.....+.+.....+++|++.+|++ .|..+........+..+. ..+.
T Consensus 318 ~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~~~~~~~~ 397 (539)
T PF03137_consen 318 SFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVILYSPLFFL 397 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHHHHHHHHee
Confidence 99999999999999999999999999998888877666666689999999875 455555555544444333 1110
Q ss_pred --cchhh----HHHh-------hhhHHHHH------HHHhhhhh--hhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhh
Q 011514 334 --WSAWV----IKIF-------FNKVFKLL------LLSFITRK--QISVHVLLLKILKSIFMQVPYATTAFSVLVVFAT 392 (484)
Q Consensus 334 --~~~~~----~~~~-------~~~~~~~~------~~~f~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 392 (484)
++... ..|. .......+ .-..+.++ .... ...+.......++..+..+...
T Consensus 398 ~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C--------~~~~~~Fl~~~~~~~~~~~~~~ 469 (539)
T PF03137_consen 398 GCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDC--------CNKLIPFLILLFILSFFTFMSQ 469 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCccc--------ccccHHHHHHHHHHHHHHHhcc
Confidence 11000 0000 00000000 00000000 0000 0000111222223334444455
Q ss_pred hHHHHHHhcccCCCchhHHHHHHHHHHH-HHHHHHHHHHHHHHHhh
Q 011514 393 PSFRSIVSKQVGPNEQGKAQGCISGISS-FANIVSPLIFSPLTALF 437 (484)
Q Consensus 393 ~~~~~~~~~~~p~~~~g~~~g~~~~~~~-lg~~~gp~i~g~l~~~~ 437 (484)
.......-+.+|+++|+.+.|+...+.+ +|.+-||.++|.+.|..
T Consensus 470 ~p~~~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~t 515 (539)
T PF03137_consen 470 VPSTLITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDST 515 (539)
T ss_dssp ----------------------------------------------
T ss_pred cchheeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhhh
Confidence 5555666789999999999999987755 67899999999999873
No 120
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.60 E-value=8.7e-13 Score=130.28 Aligned_cols=379 Identities=15% Similarity=0.152 Sum_probs=220.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhhccccc-----CchhHhHHHHHHHHHHHHHHHhccch-hhHHHHHHHHHHhhhh
Q 011514 47 SLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQY-----GRKAMLTLPLTLSIIPLAILAYRRSI-SFFYAYYALRTLTAMV 120 (484)
Q Consensus 47 ~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-----Grk~~l~~~~~~~~i~~~~~~~~~~~-~~~~~l~~~r~l~G~~ 120 (484)
+.++.+.....+...++..+ .|++|.++|.+ .||+-++++.++.+++...++..++. .......+.-++..++
T Consensus 21 ~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~la~~g 99 (433)
T PF03092_consen 21 GLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVLLFLASFG 99 (433)
T ss_pred CCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHH
Confidence 44555556667777777654 78899999976 35566777888777766666654431 1133444444555543
Q ss_pred ccchhhHhhhHHHhhcCC--ccchhHHHHHHHHHHHhHHhHHHHhhHhh----hhHHHHHHHHHHHHHHHHHHHHHcccC
Q 011514 121 CEGSINCLALAYVADNIS--ERQRASAFGILLGVLSASFVCGTLAARFL----STTSAFQAATIVSMLAAAYMRVFLKDD 194 (484)
Q Consensus 121 ~~g~~~~~~~~~i~~~~~--~~~r~~~~~~~~~~~~~g~~ig~~l~~~l----~~~~~f~~~~~~~~i~~~~~~~~lpe~ 194 (484)
. .....++.+.+.|... +++|+...+.......+|.+++..++|.+ +++..|.+.+++..+..+...+..+|.
T Consensus 100 ~-a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~~~~~e~ 178 (433)
T PF03092_consen 100 Y-AFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIVALFLLEER 178 (433)
T ss_pred H-HHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHHHHHhhhhc
Confidence 3 5666789999999884 44578888888888999999998888774 568888888878777776666666662
Q ss_pred CCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHHHHHHhhccchhHHHHH-HHHHHhchhhhhHHHHHHHH
Q 011514 195 VPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAV-VAFFSGLSEGGMQASFLYFL 273 (484)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 273 (484)
+..++.+ ....+++... ......++..++.++ ..++|.++...+ ..++............-.+.
T Consensus 179 ~~~~~~~-------------~~~~~~~~~~-~~~~~~~~~~~~l~~-~~~~~~i~~~~~~~~~~~~~~~~~~~a~~fy~~ 243 (433)
T PF03092_consen 179 KVRPADE-------------VFSFGKEEVP-CLFGSFREQLSELWR-ALQQRAIWQPILFFIFFFNLPPSISSASSFYFQ 243 (433)
T ss_pred cccccch-------------hhcccccccc-hhhHHHHHHHHHHHH-HHhhhHHHHHHHHHHHHHHhccCCCCccEEEEE
Confidence 2111110 0000000000 000001112223233 334466665555 33333322222111111122
Q ss_pred hhhcC---cChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhhccchhh--HHHhhhhHHH
Q 011514 274 KAQFH---FNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWV--IKIFFNKVFK 348 (484)
Q Consensus 274 ~~~~g---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 348 (484)
.+..+ +++...+.+..+..++..++..+. .+...+..-|+++....++.++..+.-...-..+. .+.
T Consensus 244 ~~~~~gp~fs~~f~~~~~~vg~~~~l~g~~~y-~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi------- 315 (433)
T PF03092_consen 244 TDALGGPHFSPSFYGTLSIVGSIASLLGILLY-RKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGI------- 315 (433)
T ss_pred eccccccccCHHHHHHHHHHHHHHHHHHHHHH-HHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCc-------
Confidence 33345 888888888866667777776444 55555556677776666555443332111111110 000
Q ss_pred HHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHH
Q 011514 349 LLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPL 428 (484)
Q Consensus 349 ~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~ 428 (484)
++. .....-..+..+......-......+|..|+...|+.+++..++.++|..++..
T Consensus 316 -------~d~----------------~f~lgd~~l~~~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~ 372 (433)
T PF03092_consen 316 -------PDQ----------------WFALGDTILEEVIGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSST 372 (433)
T ss_pred -------CCe----------------EEEEEhHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 000 001223345555556666667778899999999999999999999999999999
Q ss_pred HHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHHHHHHhccCCC
Q 011514 429 IFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSHTPA 473 (484)
Q Consensus 429 i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (484)
++..+.+..+-.+..|.-.....++..++.++.+.+...++++.+
T Consensus 373 lg~~l~~~~~vt~~~f~~l~~lili~~~~~ll~l~ll~lLp~~~~ 417 (433)
T PF03092_consen 373 LGAFLMELFGVTRDDFSNLWLLILICSVIQLLPLPLLFLLPPQKR 417 (433)
T ss_pred HHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHHHHHcCCCch
Confidence 999999887422323322233445555555666666666666443
No 121
>PRK10054 putative transporter; Provisional
Probab=99.58 E-value=1.8e-13 Score=134.54 Aligned_cols=171 Identities=12% Similarity=0.109 Sum_probs=136.7
Q ss_pred cchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHH
Q 011514 245 SVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAAC 324 (484)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~ 324 (484)
+|.++.+.+..++...+.....+++|.|+++.+|++..+.|+..+...+...+.+ +..|+++||+|+|+.+..+..+..
T Consensus 6 ~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~-~~~G~l~Dr~g~k~~~~~~~~~~~ 84 (395)
T PRK10054 6 RRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFS-LGFGILADKFDKKRYMLLAITAFA 84 (395)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHhhcCcchhHHHHHHHHH
Confidence 3567777788888888888889999999999899999999999999999999988 667999999999999999888888
Q ss_pred HHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccC
Q 011514 325 INMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVG 404 (484)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p 404 (484)
++.+.+.+.++.+. ......+.+.+.+...+...++..|..|
T Consensus 85 ~~~~~~~~~~~~~~--------------------------------------~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 126 (395)
T PRK10054 85 SGFIAIPLVNNVTL--------------------------------------VVLFFALINCAYSVFSTVLKAWFADNLS 126 (395)
T ss_pred HHHHHHHHHhHHHH--------------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 88877777666544 1222234455556667788899999999
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHH
Q 011514 405 PNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFI 463 (484)
Q Consensus 405 ~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (484)
+++|+++.|+.+...++|..++|.+.+.+.+. +++. .|.+.+++.++..+
T Consensus 127 ~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~~--g~~~-------~f~~~~~~~~i~~i 176 (395)
T PRK10054 127 STSKTKIFSLNYTMLNIGWTVGPPLGTLLVMQ--SINL-------PFWLAAICSAFPLV 176 (395)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--ccCc-------HHHHHHHHHHHHHH
Confidence 99999999999999999999999999998753 5554 34555555444433
No 122
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.55 E-value=6e-12 Score=116.44 Aligned_cols=274 Identities=13% Similarity=0.076 Sum_probs=179.6
Q ss_pred HHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHHHHH
Q 011514 14 FVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSII 93 (484)
Q Consensus 14 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~i 93 (484)
.....+...+..+..|.+-.+.++. +.+..+++.+........++.+++.|.++||+|||+.-+.-+++.++
T Consensus 40 l~vY~La~~aDWLQGpY~Y~LY~~y--------g~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~ 111 (354)
T PF05631_consen 40 LLVYLLAMAADWLQGPYLYALYESY--------GFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSL 111 (354)
T ss_pred HHHHHHHHHHHHhhcchhHHHHHHc--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Confidence 3344556677788888766655554 44445668888899999999999999999999999999999999999
Q ss_pred HHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHH-hhcC----CccchhHHHHHHH-HHHHhHHhHHHHhhHh-
Q 011514 94 PLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYV-ADNI----SERQRASAFGILL-GVLSASFVCGTLAARF- 166 (484)
Q Consensus 94 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i-~~~~----~~~~r~~~~~~~~-~~~~~g~~ig~~l~~~- 166 (484)
+++. -..++ ++.++++|++.|+.. .....+-.++. .|.- |++..+..++... ..+++-.+.+.+++..
T Consensus 112 scl~-k~~~~---~~~L~~GRvlgGiaT-SLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l 186 (354)
T PF05631_consen 112 SCLT-KHSSN---YPVLLLGRVLGGIAT-SLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVL 186 (354)
T ss_pred HHHH-Hhccc---cHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHH
Confidence 9964 44577 899999999999865 55555666664 4432 2333344444333 2223333333344433
Q ss_pred ---h--hhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHHHHHH
Q 011514 167 ---L--STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICL 241 (484)
Q Consensus 167 ---l--~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (484)
. |-..||.....+..+..+++...-+|...+..++ .+..++.++..+.
T Consensus 187 ~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~~~~~---------------------------~~~~~~~~~a~~~ 239 (354)
T PF05631_consen 187 ADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENYGDTSSS---------------------------SSLSGSFREAWRA 239 (354)
T ss_pred HHHhCCCCcchHHHHHHHHHHHHHHHHhcccccCCCcccc---------------------------cchHHHHHHHHHH
Confidence 2 2378999988888777777766566654332211 1122356667777
Q ss_pred hhccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHH
Q 011514 242 LRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLF 321 (484)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~ 321 (484)
+.++|+++.+.+...++....+.+...+++-++.. + +..-.|.+++......++++.+.....+++......+.....
T Consensus 240 i~~d~ril~LG~~qslFE~smy~FVflWtPaL~~~-~-~~~P~GlIFssFM~a~MlGS~lf~~l~s~~~~~e~~l~~v~~ 317 (354)
T PF05631_consen 240 ILSDPRILLLGLIQSLFEGSMYLFVFLWTPALDPD-D-EELPLGLIFSSFMVAMMLGSSLFSRLLSKSLRPESLLRYVFA 317 (354)
T ss_pred HHcCchhHHHHHHHHHHHHHHHHheeeeeceecCC-C-CCCCchHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 88889999888888888777776555544444421 1 233469999999999999995553345555554455544455
Q ss_pred HHHHHHHH
Q 011514 322 AACINMFI 329 (484)
Q Consensus 322 ~~~~~~~~ 329 (484)
+.++++.+
T Consensus 318 ~aa~~l~~ 325 (354)
T PF05631_consen 318 VAAVSLAI 325 (354)
T ss_pred HHHHHHHH
Confidence 44444443
No 123
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.53 E-value=5.6e-13 Score=131.82 Aligned_cols=184 Identities=13% Similarity=0.109 Sum_probs=141.5
Q ss_pred HHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCC---chhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHH
Q 011514 12 HLFVTVFLWGFATMMVVPAITDVTMMALCPGLDE---CSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPL 88 (484)
Q Consensus 12 ~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~---~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~ 88 (484)
.+.+..++............+.+.++. +.++ .+.+....|...++..++..++.++.|+++||+|||+++..+.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~ 288 (418)
T TIGR00889 212 IFFFFSMLLGAPLQITNIFGNGFLHEF---GRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSL 288 (418)
T ss_pred eHHHHHHHHHhHHHHHHHhHHHHHHHh---cccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHH
Confidence 344455555444455556667777664 3221 1234456799999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcc-chhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHH-HHHHhHHhHHHHhhHh
Q 011514 89 TLSIIPLAILAYRR-SISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILL-GVLSASFVCGTLAARF 166 (484)
Q Consensus 89 ~~~~i~~~~~~~~~-~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~ig~~l~~~ 166 (484)
++.+++..+..... +....+.+++.+++.|++. +...+....++.|..|+++|++++++.+ ...++|..+||.++|.
T Consensus 289 ~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~-~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~ 367 (418)
T TIGR00889 289 VAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAF-DFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGV 367 (418)
T ss_pred HHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 99998887777643 2112456677899999754 6666788899999999999999999997 6788999999999876
Q ss_pred h----------hhHHHHHHHHHHHHHHHHHHHHHcccCCCCCC
Q 011514 167 L----------STTSAFQAATIVSMLAAAYMRVFLKDDVPNDD 199 (484)
Q Consensus 167 l----------~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~ 199 (484)
+ ||+..|.+.+++.++..++..+++||+.+..+
T Consensus 368 l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~~~~~ 410 (418)
T TIGR00889 368 MVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSHNAIK 410 (418)
T ss_pred HHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence 3 48899999988888888888888998755433
No 124
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.51 E-value=1.1e-13 Score=114.69 Aligned_cols=133 Identities=22% Similarity=0.309 Sum_probs=115.1
Q ss_pred HHHHHHHHHHHHhhhhhcccccCchhHhHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhc
Q 011514 57 QAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADN 136 (484)
Q Consensus 57 ~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~ 136 (484)
.+.+.++..+++++.|++.||+|||+.+..+.....++.+.....++ .+.+.+.+++.|++. +...+...+++.|.
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~ 79 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSN---ITVLIIARFLQGFGA-AFALVAGAALIADI 79 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHH-HHHHHhHHHHHHHH
Confidence 34557788899999999999999999999999999999998888888 788889999999755 66668899999999
Q ss_pred CCccchhHHHHHHHHHHHhHHhHHHHhhHhh----hhHHHHHHHHHHHHHHHHHHHHHccc
Q 011514 137 ISERQRASAFGILLGVLSASFVCGTLAARFL----STTSAFQAATIVSMLAAAYMRVFLKD 193 (484)
Q Consensus 137 ~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l----~~~~~f~~~~~~~~i~~~~~~~~lpe 193 (484)
.|+++|++..+..+....+|..++|.+++.+ +|++.+++.+.+..+..+...+..||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 80 YPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred CChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 9999999999999999999999999888764 78899998887777777776666665
No 125
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.51 E-value=1.2e-12 Score=132.44 Aligned_cols=169 Identities=15% Similarity=0.111 Sum_probs=114.1
Q ss_pred HHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHHHHHHHHH-
Q 011514 19 LWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAI- 97 (484)
Q Consensus 19 ~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~i~~~~- 97 (484)
............+|.+.++.. + .+....++..+...++..++.+..|+++||+|||+.+..+.+...++...
T Consensus 261 ~~~~~~~~~~~~~p~~l~~~~--g-----~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~ 333 (490)
T PRK10642 261 ATNVTYYMLLTYMPSYLSHNL--H-----YSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPA 333 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHhc--C-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 334445555667787775432 2 22334466777888999999999999999999999988877654433322
Q ss_pred --HHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHhh-----hhH
Q 011514 98 --LAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL-----STT 170 (484)
Q Consensus 98 --~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l-----~~~ 170 (484)
...+++ ...+++++++.|++. +...+....++.|.+|++.|+++.+.......++..++|.+.+.+ +|+
T Consensus 334 ~~~~~~~~---~~~~~~~~~~~g~~~-~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~ 409 (490)
T PRK10642 334 FILINSNV---IGLIFAGLLMLAVIL-NCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLM 409 (490)
T ss_pred HHHHhCCC---HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCch
Confidence 222344 566778888888644 444456778889999999999999975444555556777766653 367
Q ss_pred HHHHHHHHHHHHHHHHHHHHcccCCCCCC
Q 011514 171 SAFQAATIVSMLAAAYMRVFLKDDVPNDD 199 (484)
Q Consensus 171 ~~f~~~~~~~~i~~~~~~~~lpe~~~~~~ 199 (484)
.+++...+..++..+.. +++||+|++..
T Consensus 410 ~~~~~~~~~~~i~~~~~-~~~pes~~~~~ 437 (490)
T PRK10642 410 MPAYYLMVVAVIGLITG-VTMKETANRPL 437 (490)
T ss_pred HHHHHHHHHHHHHHHHH-HHhccccCCCC
Confidence 77766665555554444 45799987644
No 126
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.50 E-value=9e-13 Score=132.69 Aligned_cols=276 Identities=14% Similarity=0.187 Sum_probs=205.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHHHHHHHHHHHhcc-------------------c----
Q 011514 47 SLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRR-------------------S---- 103 (484)
Q Consensus 47 ~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~i~~~~~~~~~-------------------~---- 103 (484)
+++..+.|++.+.+-++..+...+..+..-|..|-|.+-+|.++.+++.+++++-+ +
T Consensus 128 ~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~ 207 (735)
T KOG3626|consen 128 KISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVENPSSSL 207 (735)
T ss_pred CCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhccccCCcccc
Confidence 55566679999999999999999999999999999999999999999999888631 0
Q ss_pred --------------------------hhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHH
Q 011514 104 --------------------------ISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASF 157 (484)
Q Consensus 104 --------------------------~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~ 157 (484)
...+..++++.++.|++. ....+...+|+-|...+++-+..+|+......+|.
T Consensus 208 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~-Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGP 286 (735)
T KOG3626|consen 208 SFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGA-TPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGP 286 (735)
T ss_pred chhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCC-CCCccCCCccccccccccCCcHHHHHHHHHHHhhh
Confidence 002346788999999865 77788999999999999999999999999999999
Q ss_pred hHHHHhhHhh-----------------------hhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccc
Q 011514 158 VCGTLAARFL-----------------------STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEG 214 (484)
Q Consensus 158 ~ig~~l~~~l-----------------------~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~ 214 (484)
++|-++|+++ .|+.-|++.+.+.++..+..++ +|...++..++.+ ..+ .+.
T Consensus 287 aiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~-fPk~lp~~~~~~~---~~~--~~~ 360 (735)
T KOG3626|consen 287 AIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFF-FPKELPKSQKRKR---ARD--LHV 360 (735)
T ss_pred HHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHh-CcccCccccccch---hhh--hcc
Confidence 9998888762 2666788888777777766655 6655443322100 000 000
Q ss_pred cCCCCCCCCccCcccCCCCchHHHHHHhhccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHH
Q 011514 215 VNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLA 294 (484)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 294 (484)
.+++++..+......++.+++....+.+.+||.+....+...+......++.+++|-|++..+|.++..+..+....++.
T Consensus 361 ~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp 440 (735)
T KOG3626|consen 361 LKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVP 440 (735)
T ss_pred cccccccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhh
Confidence 00000001111111122234555566688899999999999999999999999999999999999999999999888888
Q ss_pred HHHHHHHHHHHhhhhhc--chHHHHHhHHHHHHHHHH
Q 011514 295 GTISQLLFMPLLAPILG--EAKLLSLGLFAACINMFI 329 (484)
Q Consensus 295 ~~~~~~~~~~~l~~~~g--~~~~~~~~~~~~~~~~~~ 329 (484)
....+.+++|++.+|++ .|....+.++...+.++.
T Consensus 441 ~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l~l~~ 477 (735)
T KOG3626|consen 441 AAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVLSLLF 477 (735)
T ss_pred hhhhhhhccceeeeeecccHHHHHHHHHHHHHHHHHH
Confidence 88888899999999875 455555555544444433
No 127
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.50 E-value=9.4e-13 Score=132.17 Aligned_cols=173 Identities=14% Similarity=0.118 Sum_probs=141.0
Q ss_pred cchhHHHHHHHHHHhchhhhhHHHHHHHHhhh--cCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhh-hcchHHHHHhHH
Q 011514 245 SVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQ--FHFNKNQFADLMLIAGLAGTISQLLFMPLLAPI-LGEAKLLSLGLF 321 (484)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~g~~~~~~~~~~ 321 (484)
++.++.+....++..+++++...++|.|+++. +|++..+.+...+.......++. +.+|+++|| +|||+.+..+..
T Consensus 9 p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~-~~~G~laDr~~G~~~~l~~~~~ 87 (475)
T TIGR00924 9 PKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLT-SVGWWFGDRVWGTKKTMVLGGI 87 (475)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH-hhHHHHHHhhcchHHHHHHHHH
Confidence 45666777778888889999999999999887 89999999999999999999998 777999999 899999999999
Q ss_pred HHHHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhc
Q 011514 322 AACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSK 401 (484)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 401 (484)
+.+++.+++.+.++.+. +.....+.+++.+...|...+++.+
T Consensus 88 ~~~~g~~~~~~~~~~~~--------------------------------------~~~~~~l~g~g~g~~~~~~~~~~a~ 129 (475)
T TIGR00924 88 VLMLGHFMLAMSIYPDL--------------------------------------IFYGLGTIAVGSGLFKANPSSMVGK 129 (475)
T ss_pred HHHHHHHHHHhcccHhH--------------------------------------HHHHHHHHHhccccccCCHHHHHHH
Confidence 99999888887665444 1334446788888888999999999
Q ss_pred ccCCCc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHHH
Q 011514 402 QVGPNE---QGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQ 464 (484)
Q Consensus 402 ~~p~~~---~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (484)
.+|+++ |++++++.+...++|..+||.+.|.+.+.. +++. .|.+.++..+++.+.
T Consensus 130 ~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~-g~~~-------~f~~~~~~~~~~~l~ 187 (475)
T TIGR00924 130 LYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENY-GYHV-------GFNLAAVGMVIGLLT 187 (475)
T ss_pred hcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhc-ChHH-------HHHHHHHHHHHHHHH
Confidence 998754 888999999999999999999999999875 5544 345544444444333
No 128
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.50 E-value=1.7e-12 Score=134.76 Aligned_cols=139 Identities=23% Similarity=0.132 Sum_probs=115.4
Q ss_pred HHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHH
Q 011514 53 SGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY 132 (484)
Q Consensus 53 ~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~ 132 (484)
..+...+..++.+++.++.|+++||+|||++++.+.++.+++.++.++.++ ...+++.+++.|++. +...+...++
T Consensus 597 ~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s---~~~ll~~~~l~g~~~-~~~~~~~~a~ 672 (742)
T TIGR01299 597 IYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNS---ESAMIALLCLFGGLS-IAAWNALDVL 672 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcc---HHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 345566778999999999999999999999999999999999999999888 666777788888655 4555789999
Q ss_pred HhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHhh---hhHHHHHHHHHHHHHHHHHHHHHcccCCC
Q 011514 133 VADNISERQRASAFGILLGVLSASFVCGTLAARFL---STTSAFQAATIVSMLAAAYMRVFLKDDVP 196 (484)
Q Consensus 133 i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l---~~~~~f~~~~~~~~i~~~~~~~~lpe~~~ 196 (484)
++|++|.++|++++|+..+...+|.++||.+++.+ +...+|++.+++.++..++.. ++||++.
T Consensus 673 ~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~~~~~pf~i~a~~lll~~ll~~-~LPET~~ 738 (742)
T TIGR01299 673 TVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGITKAAPILFASAALACGGLLAL-KLPDTRG 738 (742)
T ss_pred HHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH-hCCCCcc
Confidence 99999999999999999999999999999998754 346678887766666555544 5788654
No 129
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.48 E-value=2.5e-12 Score=124.38 Aligned_cols=165 Identities=19% Similarity=0.317 Sum_probs=131.9
Q ss_pred HHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhh
Q 011514 253 VVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSI 332 (484)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 332 (484)
+..++..+.........|.++.+.+|.++.+.++..+...+...+.+ +..|++.||+|||+.+..+..+.+++.+...+
T Consensus 3 l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~-~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~ 81 (352)
T PF07690_consen 3 LAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFS-PFAGYLSDRFGRRRVLIIGLLLFALGSLLLAF 81 (352)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHH-HHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCCeeeEeehhhhhhhHHHHhhh
Confidence 45556666666677777767777789999999999999999999999 66699999999999999999998888555554
Q ss_pred ccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHH
Q 011514 333 SWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQ 412 (484)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~ 412 (484)
.++.+. +....++.|++.+...+...+++.|..|+++|+++.
T Consensus 82 ~~~~~~--------------------------------------~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~ 123 (352)
T PF07690_consen 82 ASNFWL--------------------------------------LLIARFLLGIGSGFFSPASNALIADWFPPEERGRAF 123 (352)
T ss_dssp HCCHHH--------------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHH
T ss_pred hhhHHH--------------------------------------Hhhhccccccccccccccccccccccchhhhhhhcc
Confidence 444444 255556889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHHH
Q 011514 413 GCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQ 464 (484)
Q Consensus 413 g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (484)
|..+....+|..++|.+++.+.+.. +.+. .+.+.+++.++..+.
T Consensus 124 ~~~~~~~~~g~~~g~~l~~~l~~~~-~~~~-------~~~~~~~~~~~~~il 167 (352)
T PF07690_consen 124 GILSAGFSLGSILGPLLGGFLISYF-GWRW-------AFLISAILSLIAAIL 167 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCHC-HHCC-------HHHHHHHHHHHHHHH
T ss_pred ccccchhhhhhhcccchhhhhhhcc-cccc-------ccccccchhhhhhhh
Confidence 9999999999999999999998765 5544 456666666655543
No 130
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.48 E-value=2.8e-12 Score=126.24 Aligned_cols=148 Identities=11% Similarity=0.080 Sum_probs=127.1
Q ss_pred HHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHH
Q 011514 249 SQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMF 328 (484)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~ 328 (484)
+......++...+.....++++.|+++.+|+++.+.|...+...+...+.+ ++.|+++||+|+|+.+..+..+.+++.+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~-~~~G~l~dr~g~k~~l~~~~~~~~~~~~ 91 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLG-IFGGAIADRFGAKPMIVTGMLMRAAGFA 91 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHH-hhhhHHHHHhCchHHHHHHHHHHHHHHH
Confidence 345566777777778888899999988889999999999999999888888 7779999999999999999999999988
Q ss_pred HHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCch
Q 011514 329 ICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQ 408 (484)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~ 408 (484)
.+...++.+. +.....+.+++.+...|...+.+.+..|+++|
T Consensus 92 ~~~~~~~~~~--------------------------------------l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~ 133 (400)
T PRK11646 92 TMAIAHEPWL--------------------------------------LWLSCILSGLGGTLFDPPRTALVIKLIRPHQR 133 (400)
T ss_pred HHHHhccHHH--------------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHH
Confidence 8877766555 23344467777777888889999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011514 409 GKAQGCISGISSFANIVSPLIFSPLTA 435 (484)
Q Consensus 409 g~~~g~~~~~~~lg~~~gp~i~g~l~~ 435 (484)
+++.|+.+...++|..+||.++|.+.+
T Consensus 134 ~~a~~~~~~~~~~g~~ig~~l~g~l~~ 160 (400)
T PRK11646 134 GRFFSLLMMQDSAGAVIGALLGSWLLQ 160 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999984
No 131
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.46 E-value=3e-12 Score=124.44 Aligned_cols=151 Identities=14% Similarity=0.107 Sum_probs=124.5
Q ss_pred HHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHH
Q 011514 251 AAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFIC 330 (484)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~ 330 (484)
.....++..+........+|.|..+. +.++.+.++..+...++..+.+ +..|+++||+|||+.+..+..+..++....
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~~~-~~s~~~~g~~~~~~~~~~~i~~-~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~ 81 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVLAG-TGSASVLSLAALAGMLPYVVLS-PIAGALADRYDRKKVMIGADLIRAVLVAVL 81 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHH-HhhhHHHHhhchhHHHHHHHHHHHHHHHHH
Confidence 44566666677777788888888875 8999999999999999999998 666999999999999998888877776666
Q ss_pred hhcc-----chhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCC
Q 011514 331 SISW-----SAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGP 405 (484)
Q Consensus 331 ~~~~-----~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~ 405 (484)
.+.. +.+. +.....+.+++.+...+...+++.|..|+
T Consensus 82 ~~~~~~~~~~~~~--------------------------------------~~~~~~l~g~~~~~~~~~~~~~~~~~~~~ 123 (365)
T TIGR00900 82 PFVALLGGLNIWQ--------------------------------------VYVLAGILAIAQAFFTPAYQAMLPDLVPE 123 (365)
T ss_pred HHHHHcCCCcHHH--------------------------------------HHHHHHHHHHHHHHHHHHHHHHHHhcCCH
Confidence 5544 3333 13444577888888899999999999999
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 011514 406 NEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGA 442 (484)
Q Consensus 406 ~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~ 442 (484)
++|+++.|..+....+|..++|.+.+.+.+.. +.+.
T Consensus 124 ~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-g~~~ 159 (365)
T TIGR00900 124 EQLTQANSLSQAVRSLFYIVGPGIGGLMYATL-GIKW 159 (365)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh-hHHH
Confidence 99999999999999999999999999998875 5443
No 132
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.45 E-value=6.9e-10 Score=105.76 Aligned_cols=370 Identities=13% Similarity=0.040 Sum_probs=224.5
Q ss_pred chhhHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHh
Q 011514 5 KEIKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAML 84 (484)
Q Consensus 5 ~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l 84 (484)
+|++....++.-.|+..+ -=.-|.+.+|+.+. .++.++.+++. -+.-...-.++...++...+.|..|.|+++
T Consensus 2 ~w~~~~~llc~~gf~~~f--rPsEPfl~~yL~~~-~kn~T~~qv~~----~i~Pv~tYSyl~~l~~vflltd~l~Ykpvi 74 (412)
T PF01770_consen 2 SWKKITLLLCLFGFFKEF--RPSEPFLTPYLTGP-DKNFTEEQVNN----EIYPVWTYSYLAFLLPVFLLTDYLRYKPVI 74 (412)
T ss_pred CchHHHHHHHHHHHHHhc--CCCCccchHHHcCC-ccCCCHHHHHH----hhhhHHHHHHHHHHHHHHHHHHHhhhhHHH
Confidence 455555555554444332 22233444443321 01333333332 334444556667778899999999999999
Q ss_pred HHHHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhh
Q 011514 85 TLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAA 164 (484)
Q Consensus 85 ~~~~~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~ 164 (484)
+++.+...+...+..+.++ ...+-+..+..|+.. +. ..+..+|+-...|+++-.++.+...++..+|..++.++|
T Consensus 75 il~~~~~i~t~~lll~~~s---v~~mq~~q~~yg~~~-a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lg 149 (412)
T PF01770_consen 75 ILQALSYIITWLLLLFGTS---VLAMQLMQFFYGLAT-AA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLG 149 (412)
T ss_pred HHHHHHHHHHHHHHHHHCc---HHHHHHHHHHHHHHH-HH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999 899999999999755 44 457889999999999999999999999999988888887
Q ss_pred Hhh------hhHHHHHHHHHHHHHHHHHHHHHcccCCCCC---CCCCCCCCcccccccccCCCCCCC-----CccCcccC
Q 011514 165 RFL------STTSAFQAATIVSMLAAAYMRVFLKDDVPND---DDDDLTRPIITEETEGVNQNESNS-----PVKIPVCK 230 (484)
Q Consensus 165 ~~l------~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 230 (484)
-.+ +.+...++......++.+. .+++|.+++.. ++..+..+....+.+..++.+++. +......+
T Consensus 150 Qllvs~~~~sy~~L~~isl~~~~~a~~~-~~fLP~~~~S~~f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (412)
T PF01770_consen 150 QLLVSFGGVSYFQLNYISLASVSLALLI-ALFLPMPKRSLFFHRKPPAEQDANESESDKMNESPESSSSTEKSPSTESSS 228 (412)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHH-HHHcCCCCcccceeccCccccccccccccccccccccccccccCcccccch
Confidence 653 3455555555344444433 45588766532 111111110001111111111110 00001011
Q ss_pred CCCchHHH---HHHhhccchhHHHHHHHHHHhchhhhhHHHHHHHHhhh--cCcChhhHHHHHHHHHHHHHHHHHHHHHH
Q 011514 231 KIPSIRDL---ICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQ--FHFNKNQFADLMLIAGLAGTISQLLFMPL 305 (484)
Q Consensus 231 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (484)
....++.. ++...++|.++...+-..+...++....++.....++. -+-+..-.|.+-....+.+.++. +..|+
T Consensus 229 ~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~atcgy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~a-l~~g~ 307 (412)
T PF01770_consen 229 RKSVLRLLWKDFKSCYSNPRLLLWSLWWAFATCGYYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAA-LLAGY 307 (412)
T ss_pred HHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHH-HHHhH
Confidence 11112222 23345678888777777777767766666665544443 12233335777778888888887 66688
Q ss_pred hhhhhcchHHHH--HhHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHH
Q 011514 306 LAPILGEAKLLS--LGLFAACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTA 383 (484)
Q Consensus 306 l~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (484)
+..++.+..-+. ....+.+..++++...++.|. .....++
T Consensus 308 v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t~~Iwv--------------------------------------~Y~~yIi 349 (412)
T PF01770_consen 308 VKVNWDRWGELALGVFSLLQAGLLFLMSFTGNIWV--------------------------------------CYAGYII 349 (412)
T ss_pred hhcchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHH--------------------------------------HHHHHHH
Confidence 866665544333 333445566666777777776 1223335
Q ss_pred HHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHH
Q 011514 384 FSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVS 426 (484)
Q Consensus 384 ~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~g 426 (484)
+........+.....+++....+.-|-++|+++++..+-+.+-
T Consensus 350 f~~~y~fliTiA~~qIA~~l~~e~yaLVFGiNtf~Al~LQtil 392 (412)
T PF01770_consen 350 FRSLYMFLITIASFQIAKNLSEERYALVFGINTFVALVLQTIL 392 (412)
T ss_pred HHHHHHHHHHHHHHHHHHhccccceeeeeeeHHHHHHHHHHhe
Confidence 5555666777777778888888889999998888776555443
No 133
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.45 E-value=4.3e-12 Score=125.75 Aligned_cols=175 Identities=11% Similarity=0.134 Sum_probs=133.8
Q ss_pred ccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhh-cchHHHHHhHHH
Q 011514 244 SSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPIL-GEAKLLSLGLFA 322 (484)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-g~~~~~~~~~~~ 322 (484)
+++.++..+...+...+.+++...++|.|+++.+|+++.+.+...........++. +++|+++||+ |||+.+.++..+
T Consensus 7 ~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~-ligG~LaDRilGrrr~iliG~il 85 (493)
T PRK15462 7 QPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTP-ILGGFLADKVLGNRMAVMLGALL 85 (493)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHccCcHHHHHHHHHH
Confidence 34667777777778888888999999999999899999999999888888878887 7889999998 999999999999
Q ss_pred HHHHHHHHhhccch-hhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhc
Q 011514 323 ACINMFICSISWSA-WVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSK 401 (484)
Q Consensus 323 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 401 (484)
..++.+++...... .. ......+...+.+...+...++++|
T Consensus 86 ~~lg~lll~~~~~~~~~--------------------------------------~~l~l~li~iG~G~~~~~~~alv~e 127 (493)
T PRK15462 86 MAIGHVVLGASEIHPSF--------------------------------------LYLSLAIIVCGYGLFKSNVSCLLGE 127 (493)
T ss_pred HHHHHHHHHHhhcchhH--------------------------------------HHHHHHHHHHhcccccccHHHHHHH
Confidence 88887766543211 11 0222224445566666777889999
Q ss_pred ccCCC--chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHHHH
Q 011514 402 QVGPN--EQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQS 465 (484)
Q Consensus 402 ~~p~~--~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (484)
.+|++ +|.+++++.....++|+.++|.+.|++.+.. +++. .|.+.++..+++.+..
T Consensus 128 lfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~-Gw~~-------~F~iaaigm~l~li~~ 185 (493)
T PRK15462 128 LYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEY-SWAM-------GFGLAAVGMIAGLVIF 185 (493)
T ss_pred HCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhh-ChHH-------HHHHHHHHHHHHHHHH
Confidence 99875 6999999999999999999999999998865 5544 3455544444444443
No 134
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.44 E-value=3.5e-12 Score=126.53 Aligned_cols=184 Identities=13% Similarity=0.057 Sum_probs=138.6
Q ss_pred HHHhhccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHH
Q 011514 239 ICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSL 318 (484)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~ 318 (484)
++.++++|.++......++..+.........|.+.++. +.++.+.|...+...+...+++ ++.|+++||+|||+.+..
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~s~~~~g~~~~~~~l~~~~~~-~~~G~l~dr~g~~~~l~~ 87 (417)
T PRK10489 10 LSLLKTHPAFRAVFIARFISIFGLGLLGVAVPVQIQMM-TGSTLQVGLSVTLTGGAMFIGL-MVGGVLADRYDRKKLILL 87 (417)
T ss_pred HHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCHHHHHHHHHHHHHHHHHHH-HhhHHHhhhcCCceEEEe
Confidence 34466778888888888888888777888888888775 7799999999999999999998 667999999999998887
Q ss_pred hHHHHHHHHHHHhh-----ccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhh
Q 011514 319 GLFAACINMFICSI-----SWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATP 393 (484)
Q Consensus 319 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 393 (484)
+..+.+++...... .++.+. +.....+.+++.+...+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------l~~~~~~~g~~~~~~~~ 129 (417)
T PRK10489 88 ARGTCGLGFIGLALNAFLPEPSLLA--------------------------------------IYLLGLWDGFFGSLGVT 129 (417)
T ss_pred hHHHHHHHHHHHHHHHHcCCCcHHH--------------------------------------HHHHHHHHHHHHHHHHH
Confidence 77766665554432 122222 13334466777777778
Q ss_pred HHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHHHHHHhcc
Q 011514 394 SFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSH 470 (484)
Q Consensus 394 ~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (484)
...+.+.+.+|+++|+++.++.+...++|..+||.++|.+.+.. ++++ .+.+.++..+++.+..++.++
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~-~~~~-------~~~~~~~~~~~~~~~~~~l~~ 198 (417)
T PRK10489 130 ALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAG-GVAW-------NYGLAAAGTFITLLPLLRLPA 198 (417)
T ss_pred HHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHH-hhHH-------HHHHHHHHHHHHHHHHHhCCC
Confidence 88889999999999999999999999999999999999998875 4444 334444444444444445444
No 135
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.43 E-value=8.6e-12 Score=123.41 Aligned_cols=170 Identities=19% Similarity=0.231 Sum_probs=134.5
Q ss_pred HHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHHHHHHHHH
Q 011514 18 FLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAI 97 (484)
Q Consensus 18 ~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~i~~~~ 97 (484)
+......+...+.++.+..+.. .+. +......|.+.++..++..++.+.+|+++||+|||+.+..+.....++.+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~ 304 (408)
T PRK09874 229 LIIQVATGSIAPILTLYVRELA---GNV-SNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIP 304 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh---ccc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHH
Confidence 3444455566777888877752 221 222234577788888999999999999999999999999998888888877
Q ss_pred HHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHhh----hhHHHH
Q 011514 98 LAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL----STTSAF 173 (484)
Q Consensus 98 ~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l----~~~~~f 173 (484)
..+.++ .+.+.+.+++.|++. +...|...+.+.|..|+++|++.++..+....+|..+||.+++.+ +|+..|
T Consensus 305 ~~~~~~---~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f 380 (408)
T PRK09874 305 MSFVQT---PLQLGILRFLLGAAD-GALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVF 380 (408)
T ss_pred HHHhcc---HHHHHHHHHHHHhhh-HhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHH
Confidence 777777 677788999999755 667788888999999999999999999999999999999998864 789999
Q ss_pred HHHHHHHHHHHHHHHHHcccCC
Q 011514 174 QAATIVSMLAAAYMRVFLKDDV 195 (484)
Q Consensus 174 ~~~~~~~~i~~~~~~~~lpe~~ 195 (484)
++.+++.++..+..++..++++
T Consensus 381 ~~~~~~~l~~~~~~~~~~~~~~ 402 (408)
T PRK09874 381 LVTAGVVLFNAVYSWNSLRRRR 402 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc
Confidence 9999888887777666554433
No 136
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=99.43 E-value=9.1e-10 Score=106.88 Aligned_cols=376 Identities=13% Similarity=0.086 Sum_probs=208.8
Q ss_pred hHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHH
Q 011514 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLP 87 (484)
Q Consensus 8 ~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~ 87 (484)
|..+.++...++...+.-+---..|.++.+... +. =. ..+...-.-.+..++.++..|.+.||..|+++...+
T Consensus 2 ~~~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p---~s-Ll---~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~ 74 (432)
T PF06963_consen 2 RALWRLYLSHFLSTWGDRMWEFAVPLFLISIFP---GS-LL---PVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTS 74 (432)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC---CC-cH---HHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHH
Confidence 456778999999999999988889998887631 11 11 223333445566778899999999999999987766
Q ss_pred HHHHH----HHHHHHH--hcc-c-----hhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcC------CccchhHHHHHH
Q 011514 88 LTLSI----IPLAILA--YRR-S-----ISFFYAYYALRTLTAMVCEGSINCLALAYVADNI------SERQRASAFGIL 149 (484)
Q Consensus 88 ~~~~~----i~~~~~~--~~~-~-----~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~------~~~~r~~~~~~~ 149 (484)
.+..- +++.+.. +.. + ......+++.-.+.|....-.......+.=-||. +++++.+.++.+
T Consensus 75 l~~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~m 154 (432)
T PF06963_consen 75 LVVQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATM 154 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHH
Confidence 55432 2222222 111 1 1112222333333331110111111122223442 355677788888
Q ss_pred HHHHHhHHhHHHHhhHhh----hhHHHHHHHHHHHHHHHHHHHHHcc----cCCCCCCCCCCCCCcccccccccCCCCCC
Q 011514 150 LGVLSASFVCGTLAARFL----STTSAFQAATIVSMLAAAYMRVFLK----DDVPNDDDDDLTRPIITEETEGVNQNESN 221 (484)
Q Consensus 150 ~~~~~~g~~ig~~l~~~l----~~~~~f~~~~~~~~i~~~~~~~~lp----e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (484)
.-.-.+..++||++.|.+ +.+....+.+...++....=++++. ..|.-.+++++.++....+.+ +.+++
T Consensus 155 RRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~L~~~~~~~~~~~~~~~~---~~~~~ 231 (432)
T PF06963_consen 155 RRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFLLARVYNSVPALAVKKRSSESESSSDEE---SSSES 231 (432)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHhcCCCCCcccccccccc---ccccc
Confidence 888888899999888774 4455555555566655544333222 222111111000000000000 00000
Q ss_pred CCccCcc---cCCCCchHHHHHHhhccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHH
Q 011514 222 SPVKIPV---CKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTIS 298 (484)
Q Consensus 222 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 298 (484)
....... .+.....++.++...+++.+...+...+ ..+..-++......|+... |+++...|.+-+...+.++.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~w~~Y~~q~vflas~alal-LY~TVLsf~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~g 309 (432)
T PF06963_consen 232 SSDPSILKRLWNPLRTIIRGWRTYFRQPVFLASFALAL-LYFTVLSFGGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLG 309 (432)
T ss_pred cchhhHHHHHHHHHHHHhccHHHHHhCHHHHHHHHHHH-HHHHHhcCcHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHH
Confidence 0000000 0001112223444555555544444333 3344555677788889888 999999999999999999988
Q ss_pred HHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHh---hccchh-hHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhc
Q 011514 299 QLLFMPLLAPILGEAKLLSLGLFAACINMFICS---ISWSAW-VIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIF 374 (484)
Q Consensus 299 ~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 374 (484)
. ++.+++.+|+|..|.-.++.......+.+.. +.+... . ..+...
T Consensus 310 T-~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~--------------------~~s~~~---------- 358 (432)
T PF06963_consen 310 T-WVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFS--------------------SISAYL---------- 358 (432)
T ss_pred H-HHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCch--------------------hhHHHH----------
Confidence 8 7779999999998877777665443332221 222211 0 000000
Q ss_pred cchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHH
Q 011514 375 MQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPL 428 (484)
Q Consensus 375 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~ 428 (484)
++....+--+|.=..-....-+++|.+|+++||+..|+-+..+++...+--.
T Consensus 359 --l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~ 410 (432)
T PF06963_consen 359 --LLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFV 410 (432)
T ss_pred --HHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 1222333334444455566778899999999999999999999987766443
No 137
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.43 E-value=6.4e-12 Score=123.20 Aligned_cols=166 Identities=14% Similarity=0.078 Sum_probs=127.5
Q ss_pred HHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhhc
Q 011514 254 VAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSIS 333 (484)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 333 (484)
..+.............|.+.++ +|.++.+.++..+...++..+++ ++.|++.||+|||+.+..+..+..++.+.....
T Consensus 13 ~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~g~~~~~~~~~~~~~~-~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~ 90 (385)
T TIGR00710 13 LSILGPLGIDMYLPAFPEIAAD-LSTPASIVQMTLTLYLLGFAAGQ-LLWGPLSDRYGRRPVLLLGLFIFALSSLGLALS 90 (385)
T ss_pred HHHHHHHHHHHhcccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHH-HhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHH
Confidence 3333344444555566665554 69999999999999999999998 777999999999999999998888888888777
Q ss_pred cchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHH
Q 011514 334 WSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQG 413 (484)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g 413 (484)
++.+. +.....+.+++.+...+...+++.|..|+++|+++.|
T Consensus 91 ~~~~~--------------------------------------~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (385)
T TIGR00710 91 NNIET--------------------------------------LLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYS 132 (385)
T ss_pred ccHHH--------------------------------------HHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHH
Confidence 66555 2344457888888888999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHHHHHH
Q 011514 414 CISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLM 467 (484)
Q Consensus 414 ~~~~~~~lg~~~gp~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (484)
..+....++..++|.+.+.+.+.. +++. .+.+.++..++......+
T Consensus 133 ~~~~~~~~g~~~g~~~~~~l~~~~-~~~~-------~~~~~~~~~~~~~~~~~~ 178 (385)
T TIGR00710 133 ILMPVLALAPAVAPLLGGYILVWL-SWHA-------IFAFLSLAGILLSALIFF 178 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHc-CHHH-------HHHHHHHHHHHHHHHHHH
Confidence 999999999999999999988864 4433 344444444444433333
No 138
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.42 E-value=8.4e-12 Score=125.41 Aligned_cols=160 Identities=15% Similarity=0.072 Sum_probs=133.1
Q ss_pred ccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhh-hcchHHHHHhHHH
Q 011514 244 SSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPI-LGEAKLLSLGLFA 322 (484)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~g~~~~~~~~~~~ 322 (484)
++|.++..+...+...+++++...+++.|+++.+|++..+.++....+.....+.. +++|+++|| +|||+++..+..+
T Consensus 12 ~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~-~~~G~laDr~~G~r~~~~~g~~~ 90 (489)
T PRK10207 12 QPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLI-SIGGYVGDHLLGTKRTIVLGAIV 90 (489)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH-hhHHHhhhhccchHHHHHHHHHH
Confidence 34667777778888889999999999999999999999998888888877777776 678999999 9999999999999
Q ss_pred HHHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcc
Q 011514 323 ACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQ 402 (484)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 402 (484)
..++.+.+.+..+... + +.....+.+++.+...|...+++.|.
T Consensus 91 ~~~g~~~~~~~~~~~~----------l---------------------------l~~~~~l~~ig~g~~~~~~~~li~~~ 133 (489)
T PRK10207 91 LAIGYFMTGMSLLKPD----------L---------------------------IFIALGTIAVGNGLFKANPASLLSKC 133 (489)
T ss_pred HHHHHHHHHHhccchh----------H---------------------------HHHHHHHHHhccccccCCHHHHHHHh
Confidence 9999888877654332 0 12344467888888889999999999
Q ss_pred cCCC--chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 011514 403 VGPN--EQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGA 442 (484)
Q Consensus 403 ~p~~--~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~ 442 (484)
+|++ +|+++++......++|..+||.++|++.++. ++++
T Consensus 134 ~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~-gw~~ 174 (489)
T PRK10207 134 YPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKF-GYSV 174 (489)
T ss_pred cCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhh-ChHH
Confidence 9877 4578999999999999999999999999876 5443
No 139
>PRK12382 putative transporter; Provisional
Probab=99.42 E-value=1e-11 Score=122.20 Aligned_cols=153 Identities=15% Similarity=0.053 Sum_probs=121.2
Q ss_pred chhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHH
Q 011514 246 VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACI 325 (484)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~ 325 (484)
+.++......++...........+|.++++.+|.|+.+.|...+...+...+.+ +..|+++||+|||+.+..+.+...+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~-~~~G~l~Dr~g~r~~l~~~~~~~~~ 93 (392)
T PRK12382 15 FSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTR-GYAGRLADQYGAKRSALQGMLACGL 93 (392)
T ss_pred ccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHh-hhhhHHHHhhcchHHHHHHHHHHHH
Confidence 555666666666666677777888888888889999999999999999999999 6669999999999999888777665
Q ss_pred HHHHHh---hcc-----chhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHH
Q 011514 326 NMFICS---ISW-----SAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRS 397 (484)
Q Consensus 326 ~~~~~~---~~~-----~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 397 (484)
+.+... ... +.+. +...-.+.|.+.+...+...+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~--------------------------------------l~~~r~l~G~~~~~~~~~~~~ 135 (392)
T PRK12382 94 AGLAYLLAAILPVSAPFKFAL--------------------------------------LVVGRLILGFGESQLLTGALT 135 (392)
T ss_pred HHHHHHhhhccccchhHHHHH--------------------------------------HHHHHHHHHHHHHHHHHHHHH
Confidence 543322 111 1111 133344778888877888888
Q ss_pred HHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 011514 398 IVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 437 (484)
Q Consensus 398 ~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~ 437 (484)
++.+..|+++|+++.|..+.....+..++|.+++.+.+..
T Consensus 136 ~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~ 175 (392)
T PRK12382 136 WGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHF 175 (392)
T ss_pred HHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 8899999999999999999999999999999999988764
No 140
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.42 E-value=1.2e-11 Score=123.32 Aligned_cols=154 Identities=11% Similarity=0.127 Sum_probs=124.0
Q ss_pred hHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHH
Q 011514 248 LSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINM 327 (484)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~ 327 (484)
+....+..++..+.........|.+.++ +|+++.+.+...+...++..+++ +..|++.||+|+|+.+.++..+..++.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~-~~~G~l~dr~g~r~~~~~~~~~~~~~~ 102 (434)
T PRK11663 25 LITMYLGYALFYFTRKSFNAAMPEMLAD-LGLSRSDIGLLATLFYITYGVSK-FVSGIVSDRSNARYFMGIGLIATGIIN 102 (434)
T ss_pred HHHHHHHHHHHHHhhhhHHHhhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHH-hhhhHHHhhcCCchhHHHHHHHHHHHH
Confidence 3344455555555555666778877766 69999999999999999999998 777999999999999999999999888
Q ss_pred HHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCc
Q 011514 328 FICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNE 407 (484)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~ 407 (484)
++..+.++.+. +.....+.+++.+...+...+++.+.+|+++
T Consensus 103 ~~~~~~~~~~~--------------------------------------l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~ 144 (434)
T PRK11663 103 ILFGFSSSLWA--------------------------------------FALLWVLNAFFQGWGWPVCAKLLTAWYSRTE 144 (434)
T ss_pred HHHHHHhHHHH--------------------------------------HHHHHHHHHHHHHccchHHHHHHHHhCCHHH
Confidence 88877766555 1222335677777777888899999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 011514 408 QGKAQGCISGISSFANIVSPLIFSPLTALFLSKGA 442 (484)
Q Consensus 408 ~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~ 442 (484)
|++++|+.+....+|..++|.+.+.+.+.. +++.
T Consensus 145 rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~-gw~~ 178 (434)
T PRK11663 145 RGGWWAIWNTAHNVGGALIPLVVGAIALHY-GWRY 178 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-cHHH
Confidence 999999999999999999999999998865 5544
No 141
>PRK03545 putative arabinose transporter; Provisional
Probab=99.42 E-value=1.2e-11 Score=121.49 Aligned_cols=151 Identities=11% Similarity=0.132 Sum_probs=120.7
Q ss_pred HHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhhccchhhHHHhhhhH
Q 011514 267 ASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVIKIFFNKV 346 (484)
Q Consensus 267 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (484)
...|.+ .+.+|.++.+.++..+...++..+++ +..+++.||+|||+.+..+..+.+++.+...+.++.+.
T Consensus 30 ~~~~~l-~~~~~~s~~~~g~~~~~~~~~~~~~~-~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~-------- 99 (390)
T PRK03545 30 GLLSDI-AQSFHMQTAQVGLMLTIYAWVVALMS-LPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNFTV-------- 99 (390)
T ss_pred cchHHH-HhHcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccHHH--------
Confidence 345654 45579999999999999998888888 55589999999999999999999999888888877666
Q ss_pred HHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHH
Q 011514 347 FKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVS 426 (484)
Q Consensus 347 ~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~g 426 (484)
+...-.+.|++.+...+...+++.+..|+++|+++.|+.+....++..++
T Consensus 100 ------------------------------l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig 149 (390)
T PRK03545 100 ------------------------------LLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLG 149 (390)
T ss_pred ------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHH
Confidence 13333477777777788889999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHHHH
Q 011514 427 PLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQS 465 (484)
Q Consensus 427 p~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (484)
|.+.+.+.+.. +++. .|.+.+++.++.....
T Consensus 150 ~~l~~~l~~~~-gw~~-------~f~~~~~~~~l~~~~~ 180 (390)
T PRK03545 150 LPLGRVIGQYL-GWRT-------TFLAIGGGALITLLLL 180 (390)
T ss_pred hhHHHHHHHHh-cHHH-------HHHHHHHHHHHHHHHH
Confidence 99999988865 5554 3455555444443333
No 142
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.41 E-value=5.8e-12 Score=124.25 Aligned_cols=160 Identities=15% Similarity=0.093 Sum_probs=127.2
Q ss_pred cchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHH
Q 011514 245 SVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAAC 324 (484)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~ 324 (484)
++++....+..++..+........+|.++++.+|.|+.+.|...+...+...+.+ +..|+++||+|||+++..+....+
T Consensus 14 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~-~~~G~l~Dr~g~r~~l~~~~~~~~ 92 (399)
T PRK05122 14 TLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSR-PHAGRYADTLGPKKAVVFGLCGCA 92 (399)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhc-hhhHhHHhccCCcchHHHHHHHHH
Confidence 4667777788888888888888899999988889999999999999999999999 667999999999999999888776
Q ss_pred HHHHHHhhcc--chhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcc
Q 011514 325 INMFICSISW--SAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQ 402 (484)
Q Consensus 325 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 402 (484)
++........ +.+. ...... +...-++.|++.+...+...++..+.
T Consensus 93 ~~~~~~~~~~~~~~~~----~~~~~~----------------------------l~~~r~l~G~~~~~~~~~~~~~~~~~ 140 (399)
T PRK05122 93 LSGLLYLLAGLLAAWP----VLSLLL----------------------------LLLGRLLLGIGESLAGTGSILWGIGR 140 (399)
T ss_pred HHHHHHHHhhhhhccc----hhHHHH----------------------------HHHHHHHHHhhHHhhcchHHHHHHhh
Confidence 6654443321 1111 000000 13344478888888888888888999
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 011514 403 VGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 437 (484)
Q Consensus 403 ~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~ 437 (484)
.|+++|+++.+........|..+||.+++.+.+..
T Consensus 141 ~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~ 175 (399)
T PRK05122 141 VGALHTGRVISWNGIATYGALAIGAPLGVLLYHWG 175 (399)
T ss_pred cChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcc
Confidence 99999999999999999999999999999998865
No 143
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.41 E-value=2.3e-11 Score=115.18 Aligned_cols=177 Identities=17% Similarity=0.136 Sum_probs=153.1
Q ss_pred chhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHH
Q 011514 246 VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACI 325 (484)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~ 325 (484)
..++.+.++.|.....+......+|...+| +|.+..++|...+.++.+..++. +....+.||++||+++...+.++.+
T Consensus 13 ~~l~aLa~~~F~igttEfv~~gLLp~iA~d-l~vs~~~aG~lis~yAl~~ai~a-p~l~~lt~r~~Rr~lLl~~l~lFi~ 90 (394)
T COG2814 13 LALLALALAAFAIGTTEFVPVGLLPPIAAD-LGVSEGAAGQLITAYALGVALGA-PLLALLTGRLERRRLLLGLLALFIV 90 (394)
T ss_pred HHHHHHHHHHHHHHhHHHHHHhchHHHHHH-cCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHcccchHHHHHHHHHHHHH
Confidence 456677788888888888888999997776 49999999999999999999999 5558999999999999999999999
Q ss_pred HHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCC
Q 011514 326 NMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGP 405 (484)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~ 405 (484)
+.++..+.++.+. +++.|+ +.++..+...+...+...+.+||
T Consensus 91 ~n~l~alAp~f~~----------Ll~aR~----------------------------~~g~a~G~f~~i~~~~a~~lvpp 132 (394)
T COG2814 91 SNLLSALAPSFAV----------LLLARA----------------------------LAGLAHGVFWSIAAALAARLVPP 132 (394)
T ss_pred HHHHHHHhccHHH----------HHHHHH----------------------------HHHHHHHHHHHHHHHHHHHHcCc
Confidence 9999999999888 555555 88899999999999999999999
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHHHHHHhcc
Q 011514 406 NEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSH 470 (484)
Q Consensus 406 ~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (484)
++|+++.++..+...++..+|.+++.++-|.+ +++. .|.+.+.+.+++....+..-+
T Consensus 133 ~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~-GWR~-------~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 133 GKRGRALALVFTGLTLATVLGVPLGTFLGQLF-GWRA-------TFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred cchhhHHHHHHHHHHHHHHHhccHHHHHHHHh-hHHH-------HHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999997 7776 456666666666655554433
No 144
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.41 E-value=3.6e-12 Score=126.60 Aligned_cols=161 Identities=12% Similarity=0.043 Sum_probs=126.2
Q ss_pred hhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHHHHHHHHHHHhccchhhHH
Q 011514 29 PAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFY 108 (484)
Q Consensus 29 ~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~i~~~~~~~~~~~~~~~ 108 (484)
..+|.+..+.. + +.+.+..+.|++.++..++..++.+++|+++||+|||+.+..+.++.+++..+.+++++ .+
T Consensus 244 ~~~~~~~~~~~--~--~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~---~~ 316 (420)
T PRK09528 244 QQFPNFFASFF--A--TPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATG---PL 316 (420)
T ss_pred HHHHHHHHHHH--h--ccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhccc---HH
Confidence 34566665542 1 11333456799999999999999999999999999999999999999999888988888 77
Q ss_pred HHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHH-HHHHHHhHHhHHHHhhHh----hhhHHHHHHHHHHHHHH
Q 011514 109 AYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGI-LLGVLSASFVCGTLAARF----LSTTSAFQAATIVSMLA 183 (484)
Q Consensus 109 ~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~~g~~ig~~l~~~----l~~~~~f~~~~~~~~i~ 183 (484)
.+++.+++.|+.. +...+....++.|..|++.|+...+. .+....+|..+||.+.|. .||+..|...+++.++.
T Consensus 317 ~~~~~~~l~g~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~ 395 (420)
T PRK09528 317 EVSILKLLHAFEV-PFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLF 395 (420)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHH
Confidence 7888899999644 55556778899999999998887655 567788899999988876 48999999888887777
Q ss_pred HHHHHHHcccCCCC
Q 011514 184 AAYMRVFLKDDVPN 197 (484)
Q Consensus 184 ~~~~~~~lpe~~~~ 197 (484)
.++.++.++++++.
T Consensus 396 ~~~~~~~~~~~~~~ 409 (420)
T PRK09528 396 TLISVFTLSGDREL 409 (420)
T ss_pred HHHHHHHhcCCchh
Confidence 76666666654443
No 145
>PRK10504 putative transporter; Provisional
Probab=99.41 E-value=1.4e-11 Score=124.33 Aligned_cols=156 Identities=13% Similarity=0.033 Sum_probs=129.5
Q ss_pred chhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHH
Q 011514 246 VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACI 325 (484)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~ 325 (484)
+.++...+..++............|.+.++ +|.++.+.++..+...++..++. ++.|+++||+|||+.+..+..+..+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~-~~~g~l~d~~g~r~~~~~~~~~~~~ 87 (471)
T PRK10504 10 WQLWIVAFGFFMQSLDTTIVNTALPSMAQS-LGESPLHMHMVIVSYVLTVAVML-PASGWLADRVGVRNIFFTAIVLFTL 87 (471)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhchHHHHHHHHHHHHH
Confidence 456667777777777777888889998876 69999999999888888888888 6779999999999999988888887
Q ss_pred HHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCC
Q 011514 326 NMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGP 405 (484)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~ 405 (484)
+.+...+.++.+. +.....+.|++.+...|...+.+.|.+|+
T Consensus 88 ~~~~~~~~~~~~~--------------------------------------l~~~~~l~g~~~~~~~~~~~~~~~~~~~~ 129 (471)
T PRK10504 88 GSLFCALSGTLNE--------------------------------------LLLARVLQGVGGAMMVPVGRLTVMKIVPR 129 (471)
T ss_pred HHHHHHHhCCHHH--------------------------------------HHHHHHHHHhhhHHHHHHHHHHHHHHcCH
Confidence 7777766665554 24445578888888889999999999999
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 011514 406 NEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGA 442 (484)
Q Consensus 406 ~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~ 442 (484)
++|+++.|..+...++|..++|.+.|.+.+.. +++.
T Consensus 130 ~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~-gw~~ 165 (471)
T PRK10504 130 EQYMAAMTFVTLPGQVGPLLGPALGGLLVEYA-SWHW 165 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhc-cHHH
Confidence 99999999999999999999999999999875 4443
No 146
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.40 E-value=2e-11 Score=119.94 Aligned_cols=138 Identities=13% Similarity=0.064 Sum_probs=116.2
Q ss_pred hhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhhccchhhHHHhh
Q 011514 264 GMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVIKIFF 343 (484)
Q Consensus 264 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (484)
.....+|.+.+ .+|+++.+.+...+...++..+++ +..+++.||+|||+.+..+..+.+++.+...+.++.+.
T Consensus 38 ~~~~~l~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~-~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~----- 110 (394)
T PRK10213 38 LPVSLLTPMAQ-DLGISEGVAGQSVTVTAFVAMFAS-LFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSL----- 110 (394)
T ss_pred HHHhhHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHH-----
Confidence 34445666555 469999999999999999999998 66699999999999999999999988888877766666
Q ss_pred hhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHHHH
Q 011514 344 NKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFAN 423 (484)
Q Consensus 344 ~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~ 423 (484)
+ ...-.+.|++.+...+...+++.|.+|+++|+++.+......+++.
T Consensus 111 -----l----------------------------~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~ 157 (394)
T PRK10213 111 -----L----------------------------LIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIAL 157 (394)
T ss_pred -----H----------------------------HHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHH
Confidence 2 3344478888888889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhcCCC
Q 011514 424 IVSPLIFSPLTALFLSKGA 442 (484)
Q Consensus 424 ~~gp~i~g~l~~~~~~~~~ 442 (484)
.++|.+++.+.+.. +++.
T Consensus 158 ~ig~~l~~~l~~~~-gw~~ 175 (394)
T PRK10213 158 VIAAPLGSFLGELI-GWRN 175 (394)
T ss_pred HHHHHHHHHHHhhc-CHHH
Confidence 99999999998875 5444
No 147
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.39 E-value=2e-11 Score=119.55 Aligned_cols=169 Identities=12% Similarity=0.072 Sum_probs=135.5
Q ss_pred chhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHH
Q 011514 246 VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACI 325 (484)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~ 325 (484)
+.++......+............+|.+.++ +|.+..+.++..+...++..+++ +..|++.||+|||+.+..+..+.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~s~~~~~~~~~~-~~~g~l~dr~g~r~~~~~~~~~~~~ 80 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTELAHD-VGISIPAAGHMISYYALGVVVGA-PIIALFSSRYSLKHILLFLVALCVI 80 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHHHHHH-cCCCHHHHhHHHHHHHHHHHHHH-HHHHHHHccCccHHHHHHHHHHHHH
Confidence 456666777777777777777788876554 69999999999999999999999 6779999999999999999999999
Q ss_pred HHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCC
Q 011514 326 NMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGP 405 (484)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~ 405 (484)
+.++..+.++.+. +...-.+.|++.+...+.....+.+..|+
T Consensus 81 ~~~l~~~~~~~~~--------------------------------------l~~~r~l~G~~~~~~~~~~~~~~~~~~~~ 122 (382)
T PRK10091 81 GNAMFTLSSSYLM--------------------------------------LAIGRLVSGFPHGAFFGVGAIVLSKIIKP 122 (382)
T ss_pred HHHHHHHhCcHHH--------------------------------------HHHHHHHHHhhhHHHHHHHHHHHHHhCCh
Confidence 9988888887766 23344477888787778788888999999
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHH
Q 011514 406 NEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAF 462 (484)
Q Consensus 406 ~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (484)
++|+++.|.......++..++|.+.+.+.+.. +++. .|.+.++..++..
T Consensus 123 ~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-gwr~-------~f~~~~~~~~~~~ 171 (382)
T PRK10091 123 GKVTAAVAGMVSGMTVANLLGIPLGTYLSQEF-SWRY-------TFLLIAVFNIAVL 171 (382)
T ss_pred HHhhHHHHHHHHHHHHHHHHhccHHHHHhhhc-cHHH-------HHHHHHHHHHHHH
Confidence 99999999999999999999999999988764 4443 4455554444433
No 148
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.39 E-value=3.5e-11 Score=119.00 Aligned_cols=134 Identities=9% Similarity=-0.039 Sum_probs=114.1
Q ss_pred hhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhhccchhhHHHh
Q 011514 263 GGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVIKIF 342 (484)
Q Consensus 263 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (484)
.......| .+++.+|++..+.++..+...++..+++ +..+++.||+|||+.+..+..+..++.....+.++.+.
T Consensus 25 ~~~~~~~~-~l~~~~~~s~~~~g~~~s~~~~~~~~~~-~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~---- 98 (412)
T TIGR02332 25 INIGFAGL-TMGKDLGLSATMFGLAATLFYAAYVICG-IPSNIMLAIIGARRWIAGIMVLWGIASTATMFATGPES---- 98 (412)
T ss_pred hhHHHHHH-hhHhhcCCCHHHHHHHHHHHHHHHHHHH-hhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhcCHHH----
Confidence 33444444 6777889999999999999999999999 66699999999999999999999999888888777666
Q ss_pred hhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHHH
Q 011514 343 FNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFA 422 (484)
Q Consensus 343 ~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg 422 (484)
+ ...-.+.|++.+...|....++.|.+|+++|+++.|+.+....+|
T Consensus 99 ------l----------------------------~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g 144 (412)
T TIGR02332 99 ------L----------------------------YLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVT 144 (412)
T ss_pred ------H----------------------------HHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHH
Confidence 2 333347888888888988899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHh
Q 011514 423 NIVSPLIFSPLTAL 436 (484)
Q Consensus 423 ~~~gp~i~g~l~~~ 436 (484)
..++|.+.+.+.+.
T Consensus 145 ~~~~~~~~~~l~~~ 158 (412)
T TIGR02332 145 MALGLILSGYILAL 158 (412)
T ss_pred HHHHHHHHHHHHhC
Confidence 99999999988753
No 149
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.38 E-value=3.2e-11 Score=118.19 Aligned_cols=152 Identities=8% Similarity=-0.001 Sum_probs=130.3
Q ss_pred cchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHH
Q 011514 245 SVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAAC 324 (484)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~ 324 (484)
+|.++.+....++...........+|.+.++. |.|..+.|+..+...++..+++ +..++++||+|||+.+..+..+.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~-~~s~~~~G~~~s~~~l~~~~~~-~~~g~l~dr~g~k~~~~~~~~~~~ 82 (381)
T PRK03633 5 TRPVLLLLCGLLLLTLAIAVLNTLVPLWLAQE-HLPTWQVGVVSSSYFTGNLVGT-LLAGYVIKRIGFNRSYYLASLIFA 82 (381)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHHH
Confidence 35677788888888888888999999998875 9999999999999999999999 667999999999999999999998
Q ss_pred HHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccC
Q 011514 325 INMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVG 404 (484)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p 404 (484)
++.....+.++.+. +....++.|++.+...+...+.+.+..+
T Consensus 83 ~~~~~~~~~~~~~~--------------------------------------l~~~~~l~G~~~~~~~~~~~~~~~~~~~ 124 (381)
T PRK03633 83 AGCAGLGLMVGFWS--------------------------------------WLAWRFVAGIGCAMIWVVVESALMCSGT 124 (381)
T ss_pred HHHHHHHHhccHHH--------------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 88888877776655 2334447788888888887777888889
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 011514 405 PNEQGKAQGCISGISSFANIVSPLIFSPLTAL 436 (484)
Q Consensus 405 ~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~ 436 (484)
+++|+++.|..+...++|..+||.+.+.+.+.
T Consensus 125 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 156 (381)
T PRK03633 125 SRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTE 156 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 99999999999999999999999999988765
No 150
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.38 E-value=2.6e-11 Score=119.10 Aligned_cols=149 Identities=15% Similarity=0.159 Sum_probs=120.7
Q ss_pred cchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHH
Q 011514 245 SVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAAC 324 (484)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~ 324 (484)
+|+++.+.+..++..+.........+...+ .+|.++.+.++..+.+.+...+.. ++.|++.||+|||+++..+..+.+
T Consensus 2 ~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~l~~~l~~-~~~G~laDr~grr~vl~~~~~~~~ 79 (393)
T PRK11195 2 SKGFYAIMAAQFFSALADNALLFAAIALLK-ELHYPDWSQPLLQMFFVLAYIVLA-PFVGAFADSFPKGRVMFIANGIKL 79 (393)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCcHHHHHHHHHHHHHHHHHHH-hhhhHhhhccCCchhhHHHHHHHH
Confidence 356677777777777666555555555554 458888888999999999999998 667999999999999999998887
Q ss_pred HHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccC
Q 011514 325 INMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVG 404 (484)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p 404 (484)
++.+.+....+. ...-.+.|++.+...|...+++.|.+|
T Consensus 80 ~~~~~~~~~~~~-----------------------------------------~~~r~l~G~~~a~~~pa~~a~i~~~~~ 118 (393)
T PRK11195 80 LGCLLMLFGIHP-----------------------------------------LLAYGLVGIGAAAYSPAKYGILTELLP 118 (393)
T ss_pred HHHHHHHHHHHH-----------------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 776655443221 112236788999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 011514 405 PNEQGKAQGCISGISSFANIVSPLIFSPLTAL 436 (484)
Q Consensus 405 ~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~ 436 (484)
+++|+++.|..+....++..+||.++|.+.+.
T Consensus 119 ~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~ 150 (393)
T PRK11195 119 GEKLVKANGWMEGSTIAAILLGTVLGGALADP 150 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999986
No 151
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.37 E-value=4.3e-11 Score=116.55 Aligned_cols=149 Identities=17% Similarity=0.152 Sum_probs=119.3
Q ss_pred hHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHH
Q 011514 248 LSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINM 327 (484)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~ 327 (484)
++...+..+...........+.|.++++.+|+|+.+.++..+...++..++. +..|+++||+|||+.+..+..+..++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~-~~~g~l~dr~g~r~~~~~~~~~~~i~~ 81 (366)
T TIGR00886 3 LFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLR-IILGFLVDKFGPRYTTTLSLLLLAIPC 81 (366)
T ss_pred hHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHH-HHHHHHHHHhCchHHHHHHHHHHHHHH
Confidence 4455556666666666777788877888889999999999999999999999 777999999999999999999999988
Q ss_pred HHHhhcc-chhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCC
Q 011514 328 FICSISW-SAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPN 406 (484)
Q Consensus 328 ~~~~~~~-~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~ 406 (484)
+...+.+ +.+. +.....+.|++.+. .+....++.+..|++
T Consensus 82 ~~~~~~~~~~~~--------------------------------------~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~ 122 (366)
T TIGR00886 82 LWAGLAVQSYSV--------------------------------------LLLLRLFIGIAGGS-FASCMPWISFFFPKK 122 (366)
T ss_pred HHHHHHhhhHHH--------------------------------------HHHHHHHHHHhchh-hHhHHHHHHHhcCHh
Confidence 8887776 5554 13333356666443 455678889999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 011514 407 EQGKAQGCISGISSFANIVSPLIFSPLTAL 436 (484)
Q Consensus 407 ~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~ 436 (484)
+|+++.++.....++|..+++.+.+.+.+.
T Consensus 123 ~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~ 152 (366)
T TIGR00886 123 IQGTALGLAAGWGNMGGGVAQFVMPPIIGS 152 (366)
T ss_pred hhhHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 999999999999999999888888877764
No 152
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.37 E-value=3.4e-11 Score=121.71 Aligned_cols=160 Identities=13% Similarity=0.040 Sum_probs=125.5
Q ss_pred ccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhh-hcchHHHHHhHHH
Q 011514 244 SSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPI-LGEAKLLSLGLFA 322 (484)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~g~~~~~~~~~~~ 322 (484)
+++.++..+...++..+.++....+++.|+++.+|++..+.+...+.......... .+.|+++|| +|||+.+..+..+
T Consensus 19 ~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~-~~~G~LaDr~~G~r~~~~~g~~~ 97 (500)
T PRK09584 19 QPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLV-AIGGWLGDKVLGTKRVIMLGAIV 97 (500)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHhccchHHHHHHHHHH
Confidence 34568888888888888989999999999999999999988777776655444444 567999999 5999999999999
Q ss_pred HHHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcc
Q 011514 323 ACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQ 402 (484)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 402 (484)
..++..++.+..+... . +.....+.+++.+...+...+++.+.
T Consensus 98 ~~ig~~l~~~~~~~~~----------~---------------------------l~~~~~l~gig~g~~~~~~~~l~~~~ 140 (500)
T PRK09584 98 LAIGYALVAWSGHDAG----------I---------------------------VYMGMATIAVGNGLFKANPSSLLSTC 140 (500)
T ss_pred HHHHHHHHHHhcccHH----------H---------------------------HHHHHHHHHHhhhcccCCHHHHHHHh
Confidence 9888877776543222 0 12334467788887888888899999
Q ss_pred cCCCc--hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 011514 403 VGPNE--QGKAQGCISGISSFANIVSPLIFSPLTALFLSKGA 442 (484)
Q Consensus 403 ~p~~~--~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~ 442 (484)
+|+++ +++++++.+...++|..+||.+.|++.+.. +++.
T Consensus 141 f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~-g~~~ 181 (500)
T PRK09584 141 YEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKY-GWSV 181 (500)
T ss_pred cCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhh-CHHH
Confidence 98653 456788999999999999999999999875 5554
No 153
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.37 E-value=2.9e-11 Score=119.40 Aligned_cols=150 Identities=12% Similarity=0.068 Sum_probs=122.2
Q ss_pred hHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHH
Q 011514 248 LSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINM 327 (484)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~ 327 (484)
+....+..+...+.........|.+ ++.+|.++.+.++..+...++..+++ +..|++.||+|||+.+..+..+.+++.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~s~~~~g~~~~~~~~~~~~~~-~~~G~l~Dr~g~r~~~~~~~~~~~~~~ 91 (405)
T TIGR00891 14 FSAAWLGWLLDAFDFFLVALVLAEV-AGEFGLTTVDAASLISAALISRWFGA-LMFGLWGDRYGRRLPMVTSIVLFSAGT 91 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCChhhHHHHHHHHHHHHHHHH-HHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 3444455555555555555556654 55579999999999999999999999 667999999999999999998888888
Q ss_pred HHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCc
Q 011514 328 FICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNE 407 (484)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~ 407 (484)
+...+.++.+. +.....+.|++.+...+...+++.|..|+++
T Consensus 92 ~~~~~~~~~~~--------------------------------------l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~ 133 (405)
T TIGR00891 92 LACGFAPGYIT--------------------------------------MFIARLVIGIGMGGEYGSSAAYVIESWPKHL 133 (405)
T ss_pred HHHHHhccHHH--------------------------------------HHHHHHHHHhhhhhhhHHHHHHHHHhCChhh
Confidence 88877766555 2334447888888888999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 011514 408 QGKAQGCISGISSFANIVSPLIFSPLTALF 437 (484)
Q Consensus 408 ~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~ 437 (484)
|+++.++.+....+|..+++.+.+.+.+..
T Consensus 134 ~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~ 163 (405)
T TIGR00891 134 RNKASGLLISGYAVGAVVAAQVYSLVVPVW 163 (405)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999988764
No 154
>PRK11043 putative transporter; Provisional
Probab=99.37 E-value=4.3e-11 Score=118.14 Aligned_cols=164 Identities=13% Similarity=0.082 Sum_probs=121.4
Q ss_pred hhhhhHHHHHHH--HhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhhccchhh
Q 011514 261 SEGGMQASFLYF--LKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWV 338 (484)
Q Consensus 261 ~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (484)
.+.....+.|.+ +++.+|.++.+.+...+...++..+++ +..|+++||+|||+.+..+..+..++.+...+.++.+.
T Consensus 18 ~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~-~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (401)
T PRK11043 18 GFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQ-LLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQ 96 (401)
T ss_pred HHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH-HhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHH
Confidence 333334444443 455679999999999999999999998 77799999999999999998888888877777666555
Q ss_pred HHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHH
Q 011514 339 IKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGI 418 (484)
Q Consensus 339 ~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~ 418 (484)
+.....+.|++.+...+...+.+.|.+|++++++..+..+..
T Consensus 97 --------------------------------------l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (401)
T PRK11043 97 --------------------------------------LLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPL 138 (401)
T ss_pred --------------------------------------HHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHH
Confidence 133334666776666777778889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHHHHHHhccC
Q 011514 419 SSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSHT 471 (484)
Q Consensus 419 ~~lg~~~gp~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (484)
..++..++|.+.+.+.+.. +.+. .+.+.+++.++..+..+..+++
T Consensus 139 ~~~~~~~g~~i~~~l~~~~-g~~~-------~~~~~~~~~~~~~~~~~~~~~~ 183 (401)
T PRK11043 139 VALSPALAPLLGAWLLNHF-GWQA-------IFATLFAITLLLILPTLRLKPS 183 (401)
T ss_pred HHHHHHHHHHHHHHHHhcC-ChHH-------HHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999999999998865 4443 3444444444444444444443
No 155
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.37 E-value=3.8e-11 Score=121.70 Aligned_cols=171 Identities=15% Similarity=0.071 Sum_probs=132.8
Q ss_pred hHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHH
Q 011514 248 LSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINM 327 (484)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~ 327 (484)
+....+..++...-........|.+.++ +|.+..+.++..+.+.++..... +..|+++||+|||+.+..+..+..++.
T Consensus 8 ~~~~~~~~~~~~ld~tiv~~a~p~i~~~-l~~s~~~~~~~~~~~~l~~~~~~-~~~G~l~D~~Grk~~l~~~~~~~~~~~ 85 (495)
T PRK14995 8 LVIIVLVYIPVAIDATVLHVAAPTLSMT-LGASGNELLWIIDIYSLVMAGMV-LPMGALGDRIGFKRLLMLGGTLFGLAS 85 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCHhHHHHHHHHHHHHHHHHH-HHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 4445556666666666677778887655 59999999999999999888888 666999999999999999999999999
Q ss_pred HHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhccc-CCC
Q 011514 328 FICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQV-GPN 406 (484)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-p~~ 406 (484)
+..+..++.+. + ...-.+.|++.+...|.....+.+.. |++
T Consensus 86 ~~~~~a~~~~~----------l----------------------------i~~r~l~G~g~~~~~~~~~~~l~~~~~~~~ 127 (495)
T PRK14995 86 LAAAFSPTASW----------L----------------------------IATRALLAIGAAMIVPATLAGIRATFTEEK 127 (495)
T ss_pred HHHHHcCCHHH----------H----------------------------HHHHHHHHHHHHHHHHHHHHHHHHHcCCHH
Confidence 99988887776 2 33344788888888887777776654 678
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHHHHH
Q 011514 407 EQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSL 466 (484)
Q Consensus 407 ~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (484)
+|+++.|+......+|..+||.++|.+.++. ++++ .|.+...+.++..+...
T Consensus 128 ~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~-gwr~-------~f~i~~~~~~~~~~l~~ 179 (495)
T PRK14995 128 QRNMALGVWAAVGSGGAAFGPLVGGILLEHF-YWGS-------VFLINVPIVLVVMGLTA 179 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-ChHH-------HHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999875 5544 34554444444443333
No 156
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.37 E-value=5.2e-11 Score=117.15 Aligned_cols=163 Identities=15% Similarity=0.149 Sum_probs=118.5
Q ss_pred HHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHHHHHHHHH
Q 011514 18 FLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAI 97 (484)
Q Consensus 18 ~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~i~~~~ 97 (484)
+............+|.+.++.. +.+..+.|++.+...+..+++.++.|+++||+|||+.+..+.....+....
T Consensus 226 ~~~~~~~~~~~~~~p~~l~~~~-------~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~ 298 (393)
T PRK15011 226 TLMWGTNSLYIINMPLFIINEL-------HLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAG 298 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHc-------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHH
Confidence 3333334445566777776543 334445677777777888888999999999999999888777666665555
Q ss_pred HHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHh----hhhHHHH
Q 011514 98 LAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF----LSTTSAF 173 (484)
Q Consensus 98 ~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~----l~~~~~f 173 (484)
....++ .+.+++.+++.++.. +...+....+..|..|+ +|+++.+..+...++|..+||.+++. .+|+.+|
T Consensus 299 ~~~~~~---~~~~l~~~~l~~~~~-g~~~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~ 373 (393)
T PRK15011 299 MLMAHS---PAILLGLQLLNAIYI-GILGGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVF 373 (393)
T ss_pred HHHHhh---HHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 555666 566677888877543 55555667788898875 69999999998899999999988876 4789999
Q ss_pred HHHHHHHHHHHHHHHHHccc
Q 011514 174 QAATIVSMLAAAYMRVFLKD 193 (484)
Q Consensus 174 ~~~~~~~~i~~~~~~~~lpe 193 (484)
++.+++.++..+..+ +.||
T Consensus 374 ~~~~~~~~~~~~~~~-~~~~ 392 (393)
T PRK15011 374 WFALVMIIATLFCLL-RIKD 392 (393)
T ss_pred HHHHHHHHHHHHHHH-hhcC
Confidence 888767666555554 4565
No 157
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.36 E-value=4.2e-11 Score=118.42 Aligned_cols=160 Identities=19% Similarity=0.157 Sum_probs=119.8
Q ss_pred HHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHHHHHHHHH
Q 011514 18 FLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAI 97 (484)
Q Consensus 18 ~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~i~~~~ 97 (484)
+............+|.+.++. +.+....|...+...++..++.++.|+++||+|||+.+..+.....++.+.
T Consensus 230 ~~~~~~~~~~~~~~p~~~~~~--------g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~ 301 (406)
T PRK11551 230 FFTLIVLYFLLNWLPSLLVGQ--------GLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAA 301 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHhC--------CCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 333333444444567777654 333445688889999999999999999999999999998877777777777
Q ss_pred HHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHhh-----hhHHH
Q 011514 98 LAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL-----STTSA 172 (484)
Q Consensus 98 ~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l-----~~~~~ 172 (484)
..+.++ .+.+.+..++.|++. +...+...+++.|.+|+++|++..++.+....+|..+||.+++.+ +|...
T Consensus 302 ~~~~~~---~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~ 377 (406)
T PRK11551 302 LAAAPS---FAGMLLAGFAAGLFV-VGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGV 377 (406)
T ss_pred HHhcCc---HHHHHHHHHHHHHHH-HhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHH
Confidence 777777 566667777778654 445567889999999999999999999999999999999999875 34555
Q ss_pred HHHHHHHHHHHHHHHHH
Q 011514 173 FQAATIVSMLAAAYMRV 189 (484)
Q Consensus 173 f~~~~~~~~i~~~~~~~ 189 (484)
++......++..+..++
T Consensus 378 ~~~~~~~~~~~~~~~~~ 394 (406)
T PRK11551 378 IGASIPVILVAALAALL 394 (406)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 66555455554444444
No 158
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.36 E-value=5.5e-11 Score=116.98 Aligned_cols=152 Identities=11% Similarity=0.060 Sum_probs=121.4
Q ss_pred chhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHH
Q 011514 246 VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACI 325 (484)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~ 325 (484)
|.+.......+....+.......+|.+.++ +|.++.+.++..+...++..+++ +..|+++||+|||+.+..+.....+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~s~~~~~~~~~~~~~~~~~~~-~~~G~l~Dr~g~r~~l~~~~~~~~i 80 (392)
T PRK10473 3 RFLLCSFALVLLYPAGIDMYLVGLPRIAAD-LNASEAQLHIAFSVYLAGMAAAM-LFAGKIADRSGRKPVAIPGAALFII 80 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHH-HhHhHHHHHhCChHHHHHHHHHHHH
Confidence 444455555555555656666677776665 59999999999999998888888 6679999999999999999988888
Q ss_pred HHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCC
Q 011514 326 NMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGP 405 (484)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~ 405 (484)
+.......++.+. +.....+.|.+.+...+...+++.|..|+
T Consensus 81 ~~~~~~~~~~~~~--------------------------------------~~~~~~l~g~~~~~~~~~~~~~i~~~~~~ 122 (392)
T PRK10473 81 ASLLCSLAETSSL--------------------------------------FLAGRFLQGIGAGCCYVVAFAILRDTLDD 122 (392)
T ss_pred HHHHHHHhCcHHH--------------------------------------HHHHHHHHHhhhhHHHHHHHHHHHHHcCH
Confidence 8888777665544 13333467777777788888999999999
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 011514 406 NEQGKAQGCISGISSFANIVSPLIFSPLTALF 437 (484)
Q Consensus 406 ~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~ 437 (484)
++|+++.|..+....++..++|.+++.+.+..
T Consensus 123 ~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~ 154 (392)
T PRK10473 123 RRRAKVLSLLNGITCIIPVLAPVLGHLIMLKF 154 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 99999999999999999999999998887654
No 159
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.36 E-value=3.2e-11 Score=122.26 Aligned_cols=153 Identities=14% Similarity=0.050 Sum_probs=126.4
Q ss_pred HHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHH
Q 011514 249 SQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMF 328 (484)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~ 328 (484)
..+.+..++..+.........|.+.++ +|.++.+.++..+...++..++. ++.+++.||+|||+.+..+..+..++.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~-~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 82 (485)
T TIGR00711 5 IVLMLGTFMAVLDSTIVNVAIPTIAGD-LGSSLSQVQWVITSYMLANAISI-PLTGWLAKRFGTRRLFLISTFAFTLGSL 82 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCChhhhhHHHHHHHHHHHHHH-HhHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 334445555555555666677776655 69999999999999999999998 7779999999999999999999999988
Q ss_pred HHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCch
Q 011514 329 ICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQ 408 (484)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~ 408 (484)
.....++.+. +.....+.|++.+...+...+++.|.+|+++|
T Consensus 83 ~~~~~~~~~~--------------------------------------l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r 124 (485)
T TIGR00711 83 LCGVAPNLEL--------------------------------------MIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKR 124 (485)
T ss_pred HHhCcCCHHH--------------------------------------HHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHH
Confidence 8888776665 24444578888888899999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 011514 409 GKAQGCISGISSFANIVSPLIFSPLTALFLSKGA 442 (484)
Q Consensus 409 g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~ 442 (484)
+++.++.+....+|..++|.++|.+.++. +.+.
T Consensus 125 ~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-~w~~ 157 (485)
T TIGR00711 125 GRAMAIWGLTVLVAPALGPTLGGWIIENY-HWRW 157 (485)
T ss_pred HHHHHHHHHHHHHHhhhhhccHhHhccCc-Ccee
Confidence 99999999999999999999999998865 5554
No 160
>PRK03699 putative transporter; Provisional
Probab=99.36 E-value=5.3e-11 Score=117.16 Aligned_cols=156 Identities=12% Similarity=0.016 Sum_probs=120.2
Q ss_pred hhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHH
Q 011514 247 TLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACIN 326 (484)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~ 326 (484)
..+...+..++...........+|.+.+ .+|+|..+.+...+...++..+++ ++.+++.||+|||+.+..+..+..++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~g~~~~~i~~-~~~~s~~~~g~~~s~~~~~~~i~~-~~~g~l~dr~g~r~~~~~~~~~~~i~ 85 (394)
T PRK03699 8 LTWISFLSYALTGALVIVTGMVMGPIAE-YFNLPVSSMSNTFTFLNAGILISI-FLNAWLMEIIPLKRQLIFGFALMILA 85 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHH-HhCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 3444444455544444455566777554 569999999999999999989988 77799999999999999999888888
Q ss_pred HHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCC
Q 011514 327 MFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPN 406 (484)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~ 406 (484)
.....+.++.+. +.....+.|++.+...+...+.+.|..|++
T Consensus 86 ~~l~~~~~~~~~--------------------------------------~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~ 127 (394)
T PRK03699 86 VAGLMFSHSLAL--------------------------------------FSIAMFVLGVVSGITMSIGTFLITHVYEGK 127 (394)
T ss_pred HHHHHHcchHHH--------------------------------------HHHHHHHHHHhhHhhccchhHHhhhhcccc
Confidence 888877766555 133344777777777778888899999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 011514 407 EQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGA 442 (484)
Q Consensus 407 ~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~ 442 (484)
+|+++.+..+....++..++|.+.+.+.+...+.+.
T Consensus 128 ~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~ 163 (394)
T PRK03699 128 QRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYW 163 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHH
Confidence 999999999999999999999999888764324443
No 161
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.34 E-value=5.1e-11 Score=114.94 Aligned_cols=168 Identities=23% Similarity=0.251 Sum_probs=141.3
Q ss_pred HHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchh-HhHHH
Q 011514 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKA-MLTLP 87 (484)
Q Consensus 9 ~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~-~l~~~ 87 (484)
.++......+.............|.+.++.. +.+..+.++..+...++..++.++.|++.||+|||+ .+..+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 248 (352)
T cd06174 176 LLLLLALAFFLLSFGYYGLLTYLPLYLQEVL-------GLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIG 248 (352)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 3445555666666777777788888877643 334456789999999999999999999999999999 99999
Q ss_pred HHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHhh
Q 011514 88 LTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL 167 (484)
Q Consensus 88 ~~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l 167 (484)
..+..++.+.....++ .+...+..++.|++. +...+...+++.|..|+++|++.++..+...++|..++|.+.+.+
T Consensus 249 ~~~~~i~~~~~~~~~~---~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l 324 (352)
T cd06174 249 LLLAALGLLLLALAPS---LALLLVALLLLGFGL-GFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLL 324 (352)
T ss_pred HHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHH-hccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999888 778888999999755 666789999999999999999999999999999999999998864
Q ss_pred ----hhHHHHHHHHHHHHHHHHHH
Q 011514 168 ----STTSAFQAATIVSMLAAAYM 187 (484)
Q Consensus 168 ----~~~~~f~~~~~~~~i~~~~~ 187 (484)
+|+..+.+.+++.++..+..
T Consensus 325 ~~~~~~~~~~~~~~~~~~i~~i~~ 348 (352)
T cd06174 325 LDTGGYGGVFLILAALALLAALLL 348 (352)
T ss_pred hcccCcchHHHHHHHHHHHHHHHh
Confidence 78999998887777765554
No 162
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.33 E-value=8e-11 Score=115.02 Aligned_cols=169 Identities=12% Similarity=0.158 Sum_probs=122.9
Q ss_pred HHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHH-HhHHHHHHHHHHH
Q 011514 252 AVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLS-LGLFAACINMFIC 330 (484)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~-~~~~~~~~~~~~~ 330 (484)
.+..++..++.......+|.|+++.+|.++.+.|...+...+...+.+ ...|+++||+|||+.+. .+.....++....
T Consensus 3 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~-~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~ 81 (375)
T TIGR00899 3 LLVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVS-QLLATRSDYQGDRKGLILFCCLLAALACLLF 81 (375)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHhccCCchHHHHHHHHHHHHHHHHH
Confidence 345677777888888999999988889999999999999999999998 55699999999888654 4555555666666
Q ss_pred hhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhH
Q 011514 331 SISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGK 410 (484)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~ 410 (484)
.+.++.+. +.....+.+.+.+...|...++..|..|++.|++
T Consensus 82 ~~~~~~~~--------------------------------------l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~ 123 (375)
T TIGR00899 82 AWNRNYFL--------------------------------------LLVLGVLLSSFASTANPQLFALAREHADRTGREA 123 (375)
T ss_pred HhcchHHH--------------------------------------HHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhh
Confidence 66665544 1222234555555667777888888888777765
Q ss_pred H--HHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHHHHHH
Q 011514 411 A--QGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLM 467 (484)
Q Consensus 411 ~--~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (484)
+ .+......++|..++|.+.+.+.+.. +++. .|.+.+++.++..+..++
T Consensus 124 ~~~~~~~~~~~~~g~~ig~~~~~~l~~~~-~~~~-------~f~~~~~~~~~~~~~~~~ 174 (375)
T TIGR00899 124 VMFSSVMRAQISLAWVIGPPLAFWLALGF-GFTV-------MFLTAALAFVLCGVLVWL 174 (375)
T ss_pred HHHHHHHHHHHhHHHHHhhhHHHHHHHhc-ccHH-------HHHHHHHHHHHHHHHHHH
Confidence 4 67888888999999999999998865 5544 446655555544444433
No 163
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.32 E-value=3.9e-11 Score=117.10 Aligned_cols=164 Identities=16% Similarity=0.224 Sum_probs=122.2
Q ss_pred HHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHH
Q 011514 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLT 89 (484)
Q Consensus 10 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~ 89 (484)
.+.+....+.............+.+.++. +.+..+.+...+...++..++.++.|+++||+|||+.+..+..
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~ 278 (377)
T TIGR00890 207 FWVLYLSFFLNAVSGLLLIGLYKPYGQSL--------GLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFG 278 (377)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHc--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHH
Confidence 33444444444444444445556665544 2334456888999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHh---
Q 011514 90 LSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF--- 166 (484)
Q Consensus 90 ~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~--- 166 (484)
+..++.++..+.++.. ...++...++.|++. +...+...+++.|.+|+++|+++.++.+....+|..++|.+.+.
T Consensus 279 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~-g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~ 356 (377)
T TIGR00890 279 ISAVGMAAMLFIPMLN-DVLFLATVALVFFTW-GGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALT 356 (377)
T ss_pred HHHHHHHHHHHcccch-hHHHHHHHHHHHHHh-ccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9988888887776521 233445566777654 44556678899999999999999999999999999999988876
Q ss_pred -hhhHHHHHHHHHHHHHH
Q 011514 167 -LSTTSAFQAATIVSMLA 183 (484)
Q Consensus 167 -l~~~~~f~~~~~~~~i~ 183 (484)
.||+..|.+.+++.++.
T Consensus 357 ~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 357 EIGFEYTFIVTGAFALTS 374 (377)
T ss_pred hhchhhHHHHHHHHHHHh
Confidence 47899998887665554
No 164
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.32 E-value=6.1e-11 Score=116.03 Aligned_cols=139 Identities=14% Similarity=0.149 Sum_probs=116.6
Q ss_pred hhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhhccchhhHHHh
Q 011514 263 GGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVIKIF 342 (484)
Q Consensus 263 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (484)
......+|.+.++ +|.++.+.+...+...++..++. +..+++.||+|||+.+..+..+..++.....+.++.+.
T Consensus 8 ~~~~p~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~-~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~---- 81 (377)
T PRK11102 8 DMYLPALPVIAAD-FGVSAGSVQMTLSAYILGFAIGQ-LFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQ---- 81 (377)
T ss_pred HHHhccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHH-HhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHH----
Confidence 3445667777766 59999999999999999999998 67799999999999999999998888888877666555
Q ss_pred hhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHHH
Q 011514 343 FNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFA 422 (484)
Q Consensus 343 ~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg 422 (484)
+.....+.+++.+...+...+++.|..|+++|+++.++.+....++
T Consensus 82 ----------------------------------~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 127 (377)
T PRK11102 82 ----------------------------------LIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIA 127 (377)
T ss_pred ----------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 2344447788888888888999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhcCCC
Q 011514 423 NIVSPLIFSPLTALFLSKGA 442 (484)
Q Consensus 423 ~~~gp~i~g~l~~~~~~~~~ 442 (484)
..++|.+.+.+.+.. +.+.
T Consensus 128 ~~~~~~~~~~l~~~~-~~~~ 146 (377)
T PRK11102 128 PLLAPIIGGWLLVWF-SWHA 146 (377)
T ss_pred HHHHHHHHHHHHHHc-ChHH
Confidence 999999999998865 4433
No 165
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.32 E-value=4.1e-11 Score=117.64 Aligned_cols=151 Identities=11% Similarity=0.035 Sum_probs=121.9
Q ss_pred HHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhhccchhhHHHhhhh
Q 011514 266 QASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVIKIFFNK 345 (484)
Q Consensus 266 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (484)
....|. +++.+|.++.+.++..+...++..++. +..|++.||+|||+.+..+..+..++.....+.++.+.
T Consensus 14 ~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~-~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~------- 84 (399)
T TIGR00893 14 SFAAPM-LQEDLGLSAAQYGYVFSAFSWGYVVGQ-FPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVS------- 84 (399)
T ss_pred hHhHHH-HHHhhCCChhhHHHHHHHHHHHHHHHH-HhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHH-------
Confidence 333444 666679999999999999999999999 67799999999999999999888888888877776655
Q ss_pred HHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHHHHHH
Q 011514 346 VFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIV 425 (484)
Q Consensus 346 ~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~ 425 (484)
+.....+.|++.+...+....++.|..|+++|+++.++.+....+|..+
T Consensus 85 -------------------------------~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~ 133 (399)
T TIGR00893 85 -------------------------------LYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGII 133 (399)
T ss_pred -------------------------------HHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHH
Confidence 2444457888888889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHHH
Q 011514 426 SPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQ 464 (484)
Q Consensus 426 gp~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (484)
+|.+.+.+.+.. +++. .|.+.++..++..+.
T Consensus 134 ~~~~~~~l~~~~-~~~~-------~~~~~~~~~~~~~~~ 164 (399)
T TIGR00893 134 GGPLVGWILIHF-SWQW-------AFIIEGVLGIIWGVL 164 (399)
T ss_pred HHHHHHHHHHhC-CchH-------HHHHHHHHHHHHHHH
Confidence 999999988765 4443 345544444443333
No 166
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.32 E-value=3e-11 Score=113.14 Aligned_cols=177 Identities=14% Similarity=0.110 Sum_probs=138.1
Q ss_pred hHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHH
Q 011514 248 LSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINM 327 (484)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~ 327 (484)
+....+.+..+.+....+....|. +.+..++|..|.|.+.+...+...++. ++.|.++||.+.|+.+..++++.++..
T Consensus 31 f~~~fiGYa~fYl~RknF~~a~p~-l~e~~~lsk~~lG~i~s~f~i~YG~sK-f~~G~~sDr~npr~fm~~gLilsai~n 108 (448)
T COG2271 31 FLSIFIGYAAFYLTRKNFNLAMPA-LIEDGGLSKTQLGILGSAFSITYGVSK-FVMGVLSDRSNPRYFMAFGLILSAIVN 108 (448)
T ss_pred HHHHHHHHHHHHHHHHhHhhccHH-HHHhcCCCHHHHHHHHHHHHHHHHHHH-HHhhhhcccCCCceeehHHHHHHHHHH
Confidence 333444444444444445544555 445558999999999999999999999 888999999999999999999999999
Q ss_pred HHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCc
Q 011514 328 FICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNE 407 (484)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~ 407 (484)
+++++.++.+. ..+...+-|.+++...|.+...+++-+|+++
T Consensus 109 il~Gfs~s~~~--------------------------------------~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~e 150 (448)
T COG2271 109 ILFGFSPSLFL--------------------------------------FAVLWVLNGWFQGMGWPPCARTITHWFSRKE 150 (448)
T ss_pred HHHhhhhHHHH--------------------------------------HHHHHHHHHHHhcCCCcHHHHHHHHHcCccc
Confidence 99999886665 2455558899999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHH--HHHHHhhhcCCCCcccCchHHHHHHHHHH-HHHHHHHHhccCC
Q 011514 408 QGKAQGCISGISSFANIVSPLIF--SPLTALFLSKGAPFNFPGFSIMCIGLASM-VAFIQSLMMSHTP 472 (484)
Q Consensus 408 ~g~~~g~~~~~~~lg~~~gp~i~--g~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 472 (484)
||+..++-|+..++|+.+.|++. +.+.++. +.+. .|++.+++.+ ++++..++.|+++
T Consensus 151 RG~~~siWn~shNiGGal~~~~~~la~~~~~~-~w~~-------~f~~pgiiaiival~~~~~~rd~P 210 (448)
T COG2271 151 RGTWWSIWNTSHNIGGALAPLVALLAFFAFHG-GWRA-------AFYFPGIIAIIVALILLFLLRDRP 210 (448)
T ss_pred cCceEEEehhhhhcccchHHHHHHHHHHHhcc-chhH-------HHHHHHHHHHHHHHHHHHHhCCCc
Confidence 99999999999999999999999 7777764 4444 3455555444 4444455555554
No 167
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.31 E-value=2.6e-11 Score=121.47 Aligned_cols=165 Identities=14% Similarity=0.143 Sum_probs=123.5
Q ss_pred HHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhccccc--CchhHhH-
Q 011514 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQY--GRKAMLT- 85 (484)
Q Consensus 9 ~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~--Grk~~l~- 85 (484)
.++......++..++.......+|.+.++. +.+....|++.++..++..++.++.|.++||. ++|+...
T Consensus 242 ~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~--------g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~ 313 (455)
T TIGR00892 242 GFLVYLSGNVIMFLGFFAPIIFLVPYAKDK--------GVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLF 313 (455)
T ss_pred hHHHHHHHHHHHHHHccchHHHHHHHHHHc--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHH
Confidence 344445555555666555566777777654 34455678999999999999999999999984 3343333
Q ss_pred -HHHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhh
Q 011514 86 -LPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAA 164 (484)
Q Consensus 86 -~~~~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~ 164 (484)
.+.+..+++.++....++ .+.+++.+++.|++. +...+...+++.|.+|++++++.+++.+...++|..+||.++
T Consensus 314 ~~~~~~~~l~~ll~~~~~~---~~~~~i~~~~~G~~~-g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~ 389 (455)
T TIGR00892 314 SFALLFNGLTHLLCALAGD---YTGLVIYCIFFGLSF-GSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLA 389 (455)
T ss_pred HHHHHHHHHHHHHHHHhch---HHHHHHHHHHHHHHh-chHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccce
Confidence 334444555566667777 777888999999755 666678899999999999999999999999999999999998
Q ss_pred Hhh-----hhHHHHHHHHHHHHHHHH
Q 011514 165 RFL-----STTSAFQAATIVSMLAAA 185 (484)
Q Consensus 165 ~~l-----~~~~~f~~~~~~~~i~~~ 185 (484)
+.+ +|+..|++.+++.++..+
T Consensus 390 G~l~~~~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 390 GRLVDATKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred eeeehhcCCcchHHHHhhHHHHHHHH
Confidence 863 488888888776655544
No 168
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.31 E-value=1.7e-10 Score=113.82 Aligned_cols=153 Identities=18% Similarity=0.146 Sum_probs=120.0
Q ss_pred cchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHH
Q 011514 245 SVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAAC 324 (484)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~ 324 (484)
+|.+....+..++..........+.+.+.++ +|.++.+.+...+...++..+++ ++.|++.||+|||+.+..+..+..
T Consensus 12 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~i~~-~~~g~l~dr~g~k~~l~~~~~~~~ 89 (402)
T TIGR00897 12 PLNLLWGYIGVVVFMTGDGLEQGWLSPFLKA-LGLSPQQSASAFTLYGIAAAISA-WISGVVAEIIGPLKTMMIGLLLWC 89 (402)
T ss_pred CchhhHHHHHHHHHHHhhhhHHHhHHHHHHH-hCCCHHHhHHHHHHHHHHHHHHH-HHHHHHHHHcCcHHHHHHHHHHHH
Confidence 4666777777777777777777788888866 59999999999999999999999 667999999999999999888877
Q ss_pred HHHHHHh---hc-cchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHh
Q 011514 325 INMFICS---IS-WSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVS 400 (484)
Q Consensus 325 ~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 400 (484)
++.+... .. .+.+. +.....+.|++.+...+...+.+.
T Consensus 90 ~~~~~~~~~~~~~~~~~~--------------------------------------l~~~~~i~G~g~~~~~~~~~~~~~ 131 (402)
T TIGR00897 90 VGHAAFIVFGLGHANYPL--------------------------------------ILLFYGIRGLGYPLFAYSFLVWVV 131 (402)
T ss_pred HHHHHHHHHhccCccHHH--------------------------------------HHHHHHHHHcchHHHHhHHHHHHH
Confidence 7755432 22 22222 122333567776666777778888
Q ss_pred cccCCCchhHHHHHHHHHHHHHH-HHHHHHHHHHHHhh
Q 011514 401 KQVGPNEQGKAQGCISGISSFAN-IVSPLIFSPLTALF 437 (484)
Q Consensus 401 ~~~p~~~~g~~~g~~~~~~~lg~-~~gp~i~g~l~~~~ 437 (484)
+..|+++|++++|+.+...++|. .++|.+.+.+.+..
T Consensus 132 ~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~ 169 (402)
T TIGR00897 132 YNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAF 169 (402)
T ss_pred HhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 99999999999999999999996 58899988888765
No 169
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.31 E-value=1.9e-10 Score=113.68 Aligned_cols=157 Identities=11% Similarity=0.118 Sum_probs=119.4
Q ss_pred hhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhhccchhhHH
Q 011514 261 SEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVIK 340 (484)
Q Consensus 261 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (484)
....+...+|.+. +.+|.++.+.+...+...++..++. ++.|+++||+|||+.+..+.....++.......++.+.
T Consensus 28 ~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~-~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~-- 103 (406)
T PRK15402 28 ANDMIQPGMLAVV-EDFNAGAEWVPTSMTAYLAGGMFLQ-WLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQ-- 103 (406)
T ss_pred hhhhHhcchHHHH-HHhCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccHHH--
Confidence 3444555566655 4569999999999999999999988 66699999999999999998888888777777665555
Q ss_pred HhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHH
Q 011514 341 IFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISS 420 (484)
Q Consensus 341 ~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 420 (484)
+.....+.|.+.+...+...+.+.|.+|+++|++..+.......
T Consensus 104 ------------------------------------l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 147 (406)
T PRK15402 104 ------------------------------------FTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVAL 147 (406)
T ss_pred ------------------------------------HHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHH
Confidence 13333466777777777888889999999999999999998888
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHHHH
Q 011514 421 FANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQS 465 (484)
Q Consensus 421 lg~~~gp~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (484)
++..++|.+.+.+.+.. +++. .+.+.+++.++.....
T Consensus 148 ~~~~~g~~i~~~l~~~~-~w~~-------~~~~~~~~~~~~~~~~ 184 (406)
T PRK15402 148 LAPLLGPLVGAALIHVL-PWRG-------MFVLFAALAALSFFGL 184 (406)
T ss_pred HHHHHHHHHHHHHHHcc-CccH-------HHHHHHHHHHHHHHHH
Confidence 99999999999988864 4444 3455444444444433
No 170
>TIGR00895 2A0115 benzoate transport.
Probab=99.30 E-value=9.4e-11 Score=115.34 Aligned_cols=140 Identities=14% Similarity=0.131 Sum_probs=115.2
Q ss_pred hhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhhccchhhHHH
Q 011514 262 EGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVIKI 341 (484)
Q Consensus 262 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (484)
........|.+. +.+|.++.+.+++.+...++..++. ++.+++.||+|||+.+..+..+..++.+.....++.+.
T Consensus 33 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 107 (398)
T TIGR00895 33 LAAMGFAAPAIS-AEWGLDPVQLGFLFSAGLIGMAFGA-LFFGPLADRIGRKRVLLWSILLFSVFTLLCALATNVTQ--- 107 (398)
T ss_pred HHHHHhhHHHHh-hccCCCHHHHHHHHHHHHHHHHHHH-HHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHccchHH---
Confidence 334444455554 4469999999999999999999988 77799999999999999999888888877777665554
Q ss_pred hhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHH
Q 011514 342 FFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSF 421 (484)
Q Consensus 342 ~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~l 421 (484)
+.....+.+++.+...+...+++.|..|+++|+++.|+.+....+
T Consensus 108 -----------------------------------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 152 (398)
T TIGR00895 108 -----------------------------------LLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPI 152 (398)
T ss_pred -----------------------------------HHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHH
Confidence 244455788888888999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhcCCC
Q 011514 422 ANIVSPLIFSPLTALFLSKGA 442 (484)
Q Consensus 422 g~~~gp~i~g~l~~~~~~~~~ 442 (484)
|..++|.+.+.+.+.. +++.
T Consensus 153 g~~~~~~~~~~l~~~~-g~~~ 172 (398)
T TIGR00895 153 GAAVGGFLAGWLIPVF-GWRS 172 (398)
T ss_pred HHHHHHHHHHHHhhcc-ccee
Confidence 9999999999998865 5544
No 171
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.30 E-value=3.3e-10 Score=114.13 Aligned_cols=131 Identities=15% Similarity=0.121 Sum_probs=99.5
Q ss_pred hHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhhccchhhHHHhhh
Q 011514 265 MQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVIKIFFN 344 (484)
Q Consensus 265 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (484)
.....|. +++.+|++..+.+...+...++..+++ ++.|+++||+|+|+.+..+.++.+++.++.++..+.+.
T Consensus 55 ~~~~~~~-l~~~~gls~~~~g~~~~~~~~~~~~~~-~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~~~------ 126 (476)
T PLN00028 55 AAPLLPI-IRDNLNLTKSDIGNAGIASVSGSIFSR-LAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSATG------ 126 (476)
T ss_pred HHHHHHH-HHHHcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCHHH------
Confidence 3334444 456679999999998888888888888 77799999999999999888888888877777766555
Q ss_pred hHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHHHHH
Q 011514 345 KVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANI 424 (484)
Q Consensus 345 ~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ 424 (484)
+ ....++.|++.+... ....++.+.+|+++||++.|+.+...++|..
T Consensus 127 ----l----------------------------~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~ 173 (476)
T PLN00028 127 ----F----------------------------IAVRFFIGFSLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGG 173 (476)
T ss_pred ----H----------------------------HHHHHHHHHHHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHH
Confidence 1 222335566655443 3456788999999999999999998888888
Q ss_pred HHHHHHHHHHHh
Q 011514 425 VSPLIFSPLTAL 436 (484)
Q Consensus 425 ~gp~i~g~l~~~ 436 (484)
+++.+.+.+.+.
T Consensus 174 ~~~~~~~~i~~~ 185 (476)
T PLN00028 174 VTQLLMPLVFPL 185 (476)
T ss_pred HHHHHHHHHHHH
Confidence 888877766543
No 172
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.30 E-value=2.1e-10 Score=112.44 Aligned_cols=166 Identities=14% Similarity=0.096 Sum_probs=135.1
Q ss_pred hhHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHH
Q 011514 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (484)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~ 86 (484)
+|.++...+..++...+........|.+.+|. +.+..+.|++.+...++..+..++.|++.||+|+|+.+.+
T Consensus 204 ~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~--------g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~ 275 (382)
T TIGR00902 204 NPMNLRFLAAVCLIQGAHAAYYGFSAIYWQAA--------GISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLI 275 (382)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--------CCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHH
Confidence 34455666666777777777778888888764 4444567888999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHH-HHHHhHHhHHHHhhH
Q 011514 87 PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILL-GVLSASFVCGTLAAR 165 (484)
Q Consensus 87 ~~~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~ig~~l~~ 165 (484)
+.+...+...+++++++ .+.+++.+++.|+.. +...+....++.+. |+++|++..++++ ...++|..+||.++|
T Consensus 276 ~~~~~~~~~~~~~~~~~---~~~~~~~q~l~g~~~-~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G 350 (382)
T TIGR00902 276 SAIACVGRWAIIGAIEA---FPLIFLLQILHCGTF-AVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAG 350 (382)
T ss_pred HHHHHHHHHHHHHhHhh---HHHHHHHHHHHHHHH-HHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998 888899999999755 77888899999998 9999999999986 567899999999998
Q ss_pred hh----hhHHHHHHHHHHHHHHHHH
Q 011514 166 FL----STTSAFQAATIVSMLAAAY 186 (484)
Q Consensus 166 ~l----~~~~~f~~~~~~~~i~~~~ 186 (484)
.+ ++ ..|+..+.+.++..++
T Consensus 351 ~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 351 FIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHhccH-HHHHHHHHHHHHHHHH
Confidence 75 43 4566666666554433
No 173
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.29 E-value=6.1e-10 Score=109.35 Aligned_cols=148 Identities=15% Similarity=0.097 Sum_probs=109.0
Q ss_pred chhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHH
Q 011514 246 VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACI 325 (484)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~ 325 (484)
|.++...+..+.............+.+-++.+|+|+.|.+++.++..+...+.+ +..|++.||+|.|+++.++..+..+
T Consensus 34 r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~r-ip~G~l~Dr~G~R~v~~~~~ll~~i 112 (462)
T PRK15034 34 RNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLR-VPYSFMVPIFGGRRWTVFSTAILII 112 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCChHHHHHHHHHHHH
Confidence 455555544444444444444445555554689999999999999999999998 5559999999999999999999888
Q ss_pred HHHHHhhc-----cchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHh
Q 011514 326 NMFICSIS-----WSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVS 400 (484)
Q Consensus 326 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 400 (484)
..+..++. ++.+. + .+...+.|++ +..++.....++
T Consensus 113 ~~~~~~~a~~~~~~s~~~----------l----------------------------li~r~l~Gig-g~~f~~~~~~vs 153 (462)
T PRK15034 113 PCVWLGIAVQNPNTPFGI----------F----------------------------IVIALLCGFA-GANFASSMGNIS 153 (462)
T ss_pred HHHHHHHHHcccCCCHHH----------H----------------------------HHHHHHHHHH-HHhHHHHHHHHH
Confidence 88877765 33333 2 3344466776 557788888999
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 011514 401 KQVGPNEQGKAQGCISGISSFANIVSPLIFSPL 433 (484)
Q Consensus 401 ~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l 433 (484)
+.+|+++||++.|+....+++|..+++.+...+
T Consensus 154 ~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~ 186 (462)
T PRK15034 154 FFFPKAKQGSALGINGGLGNLGVSVMQLVAPLV 186 (462)
T ss_pred HHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 999999999999999777777776665555443
No 174
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.27 E-value=2.5e-10 Score=112.43 Aligned_cols=151 Identities=15% Similarity=0.121 Sum_probs=115.5
Q ss_pred HHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHH
Q 011514 251 AAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFIC 330 (484)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~ 330 (484)
.....++..+........+|.+.++ +|.++.+.+...+...+...++. +..|+++||+|||+.+..+.....++.+..
T Consensus 13 ~~~~~~~~~~~~~~~~p~~~~i~~~-~~~s~~~~~~~~~~~~~~~~~~~-~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~ 90 (394)
T PRK11652 13 LVLLVAVGQMAQTIYVPAIADMARD-LNVREGAVQAVMAAYLLTYGLSQ-LFYGPLSDRVGRRPVILVGMSIFILGTLVA 90 (394)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHH-HhhhhHHHhcCChHHHHHHHHHHHHHHHHH
Confidence 3333444444444445556666554 59999999999999999999998 667999999999999999988888887777
Q ss_pred hhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhH
Q 011514 331 SISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGK 410 (484)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~ 410 (484)
...++.+. +.....+.|++.+...+.......|..+++++++
T Consensus 91 ~~~~~~~~--------------------------------------l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (394)
T PRK11652 91 LFAHSLTV--------------------------------------LIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRH 132 (394)
T ss_pred HHHccHHH--------------------------------------HHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHH
Confidence 66665554 1333346677766667777788888899899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC
Q 011514 411 AQGCISGISSFANIVSPLIFSPLTALFLSKGA 442 (484)
Q Consensus 411 ~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~ 442 (484)
+.+..+....++..++|.+.+.+.+.. +++.
T Consensus 133 ~~~~~~~~~~~~~~~g~~i~~~l~~~~-g~~~ 163 (394)
T PRK11652 133 ANSLLNMGILVSPLLAPLIGGLLTTLF-GWRA 163 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcc-ChHH
Confidence 999999999999999999999988764 4433
No 175
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.27 E-value=3.1e-10 Score=112.22 Aligned_cols=156 Identities=15% Similarity=0.132 Sum_probs=119.8
Q ss_pred hhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhhccchhhHH
Q 011514 261 SEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVIK 340 (484)
Q Consensus 261 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (484)
........+|. ..+.+|.+..+.+...+.+.++..+++ +..|+++||+|||+++..+..+..++.+.....++.+.
T Consensus 31 ~~~~~~p~l~~-i~~~~~~~~~~~~~~~s~~~~~~~~~~-~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~-- 106 (413)
T PRK15403 31 TTDLIQPGIIN-VVRDFNADVSLAPASVSLYLAGGMALQ-WLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQ-- 106 (413)
T ss_pred HHHhhccCHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHH-HhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHH--
Confidence 33344444555 445569999999999999999999998 66799999999999999999988888888888777666
Q ss_pred HhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHH
Q 011514 341 IFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISS 420 (484)
Q Consensus 341 ~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 420 (484)
+ ...-++.|++.+...+.......|.+|++++++..+..+....
T Consensus 107 --------l----------------------------~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (413)
T PRK15403 107 --------F----------------------------LIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVL 150 (413)
T ss_pred --------H----------------------------HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 2 2333366776665566667788899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHHH
Q 011514 421 FANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQ 464 (484)
Q Consensus 421 lg~~~gp~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (484)
++..+||.+++.+.++. +++. .|.+.++..+++.+.
T Consensus 151 ~~~~~g~~lg~~l~~~~-gw~~-------~f~~~~~~~~i~~~~ 186 (413)
T PRK15403 151 VAPIIGPLSGAALMHFV-HWKV-------LFAIIAVMGLIAFVG 186 (413)
T ss_pred HHHHHHHHHHHHHHHhc-CHHH-------HHHHHHHHHHHHHHH
Confidence 99999999999988764 4444 455555555554444
No 176
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=99.27 E-value=5e-11 Score=112.42 Aligned_cols=399 Identities=15% Similarity=0.160 Sum_probs=210.6
Q ss_pred hHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccc----cCchhH
Q 011514 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQ----YGRKAM 83 (484)
Q Consensus 8 ~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr----~Grk~~ 83 (484)
+.+..+....+-..++...-....++|+++. |. +..+.+.+--...+...+.+|+.|..+|| |||||.
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~~l---Gv-----phk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRP 103 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQSL---GV-----PHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRP 103 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHHHc---CC-----Ccccccccccccccccceecccccccccccccccccccc
Confidence 4445555555666677777788888888877 33 33345666666677888999999999995 898876
Q ss_pred hH-HHHHHHHHHHHHHHhccchhh--------------HHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhH-HHH
Q 011514 84 LT-LPLTLSIIPLAILAYRRSISF--------------FYAYYALRTLTAMVCEGSINCLALAYVADNISERQRAS-AFG 147 (484)
Q Consensus 84 l~-~~~~~~~i~~~~~~~~~~~~~--------------~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~-~~~ 147 (484)
++ .+.+..+++.++..++.+... ....+++-.+.=+.. -.....+.+++.|...++++.+ +++
T Consensus 104 fI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~-n~~qgp~ra~L~Dl~~~d~~~~~Ans 182 (498)
T KOG0637|consen 104 FILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVAN-NTLQGPCRALLADLARGDAKKTRANS 182 (498)
T ss_pred hHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhh-hhhhhhHHHHHHHhccChhhhhccch
Confidence 65 566777888888888766311 122333333333322 2444568999999998776666 999
Q ss_pred HHHHHHHhHHhHHHHhhHhhhhH--HHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCcc
Q 011514 148 ILLGVLSASFVCGTLAARFLSTT--SAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVK 225 (484)
Q Consensus 148 ~~~~~~~~g~~ig~~l~~~l~~~--~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (484)
.......+|..+|..++++.+|+ .+|.....+.+.+..+-..+..|-+-....+.+......+..... +. ...+.+
T Consensus 183 ~f~~f~avGnvLGY~~g~y~~~~~~~~Ft~~~~~~~~C~~~~~~~~~~v~L~~i~~~~~l~~~~~~~~s~-~~-~~~~~~ 260 (498)
T KOG0637|consen 183 VFSFFMAVGNVLGYALGSYLGLYKIFPFTLTTACDLYCANLKLCFFLEVTLLLIETSESLWYPQEKPLSP-KG-TTARSK 260 (498)
T ss_pred hHHHHHHhcceeeeecccccCceEEeehHHHHHHHHHHHHHHHHHHHhhhhhheecccccccccccCCCC-Cc-cccccc
Confidence 99999999999999999888774 334443333333332222222111100000000000000000000 00 000000
Q ss_pred CcccCCCCchHHHH-HHhhccchhHHHHHHHHHHhchhhhhHHHHHHHHh-hhcCcChhh---------------H-HHH
Q 011514 226 IPVCKKIPSIRDLI-CLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLK-AQFHFNKNQ---------------F-ADL 287 (484)
Q Consensus 226 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~---------------~-~~~ 287 (484)
..+.....+.+ .....+|.++.+++...+.+++...+.-+...++- +.|+-|+.. . .+-
T Consensus 261 ---~~~~~~~~e~fG~~~~mpr~m~~L~i~~lltW~a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~~~Y~~GV~~G~~G 337 (498)
T KOG0637|consen 261 ---SSKLPFLLEIFGALKVMPRPMRMLLIVTLLTWIAWFPFLLFDTDFMGREVYGGDPKADENSEAKKLYNAGVRMGCLG 337 (498)
T ss_pred ---ccCcchHHHHhchHhhCChhHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhCCCCCCCcchhHHHHHHhccccchHH
Confidence 00000011111 11234577888888888888887776666665543 334443221 1 133
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHH
Q 011514 288 MLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLL 367 (484)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~ 367 (484)
+.++.....+.+ +...++.||+|-|+.+..+.....++..+.....+.+.. ..+.+..
T Consensus 338 L~ins~~lgi~S-~~~~~l~~~~g~r~~y~~~~~~f~~~~~~~gl~~~~~~~-~~~~~~~-------------------- 395 (498)
T KOG0637|consen 338 LMLNSIVLGIYS-LLVEKLSRKFGTRKRYWGGVNAFGLATGLAGLVLNTYVV-LSHRSTA-------------------- 395 (498)
T ss_pred HHHHHHHHHHHH-HHHHHHHHhcCcceEEeehhHHHHHHHHHHhhhhhHHHH-HHHHhhc--------------------
Confidence 456666666777 666899999996555444444344443333333322210 0000000
Q ss_pred HHHhhhccchhhH----HHHHHHhhhhhhhHHHHHHhcccCCC--chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 011514 368 KILKSIFMQVPYA----TTAFSVLVVFATPSFRSIVSKQVGPN--EQGKAQGCISGISSFANIVSPLIFSPLTALFLSKG 441 (484)
Q Consensus 368 ~~~~~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~p~~--~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~ 441 (484)
.+++..+..+.+. ....+.-....+..-++..+....+. .+|...|+.+....+.+.+.....|.+.+..++.+
T Consensus 396 G~~~~~~~~~p~~l~~~y~~~g~~~a~t~~~pf~~~s~~~~~sg~g~G~~~gvln~~I~ipQvivs~~~Gp~~~~~G~~~ 475 (498)
T KOG0637|consen 396 GILSSPLLTVPYGALALYAILGIPLAITFSIPFALASIEIGNSGLGQGLDLGVLNCAIVIPQVLVSLGLGPLDQLFGGGN 475 (498)
T ss_pred ceeecchhcccHHHHHHHHHhCCccccccccccccccccccCccCCCCceeeeeeeeeeehhheeeccccchhhhcCCcc
Confidence 0000000000111 11122222222222233332222222 24667778888888888888888888888875555
Q ss_pred C
Q 011514 442 A 442 (484)
Q Consensus 442 ~ 442 (484)
.
T Consensus 476 ~ 476 (498)
T KOG0637|consen 476 L 476 (498)
T ss_pred h
Confidence 4
No 177
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.27 E-value=3.1e-10 Score=110.12 Aligned_cols=161 Identities=10% Similarity=-0.104 Sum_probs=110.5
Q ss_pred hhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhhccchhhHHH
Q 011514 262 EGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVIKI 341 (484)
Q Consensus 262 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (484)
...+...+|...+ .+|.|+.+.|+..+...++..+++ +..|++.||+|||+++..+......+.......++.+.
T Consensus 7 ~~~~~~~lp~i~~-~~~~s~~~~g~~~s~~~~g~~i~~-~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~--- 81 (368)
T TIGR00903 7 WVTFSPVLSLVAE-DIDVSKEELGLLAITYPAAFLALT-IPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEW--- 81 (368)
T ss_pred HHHHHhhHHHHHH-HhCcCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHH---
Confidence 3345556666555 469999999999999999999999 66699999999888766554444443322222233333
Q ss_pred hhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHH
Q 011514 342 FFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSF 421 (484)
Q Consensus 342 ~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~l 421 (484)
++..|+ +.|++.+. .+.......|..|+++|+++.++.+....+
T Consensus 82 -------l~~~R~----------------------------l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~l 125 (368)
T TIGR00903 82 -------LLACQL----------------------------LAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYL 125 (368)
T ss_pred -------HHHHHH----------------------------HHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHH
Confidence 333333 66777765 445555668999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHHH-HHHhccC
Q 011514 422 ANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQ-SLMMSHT 471 (484)
Q Consensus 422 g~~~gp~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 471 (484)
|..+++.+.+.+.+.. +.+. .|.+.+++.++..+. ....+++
T Consensus 126 G~~l~~~~~~~l~~~~-gWr~-------~f~~~~~l~~~~~~~~~~~lp~~ 168 (368)
T TIGR00903 126 GIIFALAAGLKIYTAG-GLQL-------LIIPIAAVAAAGIILVLAALPAL 168 (368)
T ss_pred HHHHHHHHHHHHHHcc-chHH-------HHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999999998764 5444 445544444443333 3344443
No 178
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.26 E-value=1.1e-09 Score=110.24 Aligned_cols=168 Identities=19% Similarity=0.201 Sum_probs=132.1
Q ss_pred HHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHH
Q 011514 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPL 88 (484)
Q Consensus 9 ~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~ 88 (484)
.+..+....++..+..+.....+|.+.++.+ +.+....|++.+..++|.++++...+++.+|+++++.+..+.
T Consensus 219 ~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l-------~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~ 291 (524)
T PF05977_consen 219 PLRSVLLRSFLFNLFASAVWALLPLFARDVL-------GGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLAS 291 (524)
T ss_pred HHHHHHHHHHHHHHhhhHHHHhhhHHHHHHh-------CCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHH
Confidence 3344444444444555556667888887765 333456799999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHhh-
Q 011514 89 TLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL- 167 (484)
Q Consensus 89 ~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l- 167 (484)
+..+++.+..+++++ .+...+.-++.|.+. ........+.+.+..|++.|||.++++++....+..+|.++.|.+
T Consensus 292 ~~~a~~~~~lal~~~---~~~~~~~l~l~G~~~-~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la 367 (524)
T PF05977_consen 292 LLFALALLLLALSPS---FWLALIALFLAGAAW-IIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLA 367 (524)
T ss_pred HHHHHHHHHHhcchH---HHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999 788888888999655 555567888999999999999999999999888888888877764
Q ss_pred ---hhHHHHHHHHHHHHHHHHHH
Q 011514 168 ---STTSAFQAATIVSMLAAAYM 187 (484)
Q Consensus 168 ---~~~~~f~~~~~~~~i~~~~~ 187 (484)
|-+..+.+.++..++..++.
T Consensus 368 ~~~g~~~al~~a~~~lll~~~~~ 390 (524)
T PF05977_consen 368 DHFGVRTALLIAGAALLLSALIA 390 (524)
T ss_pred HHhCHHHHHHHHHHHHHHHHHHH
Confidence 56777777765544444443
No 179
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.26 E-value=3.8e-10 Score=114.75 Aligned_cols=151 Identities=14% Similarity=0.154 Sum_probs=121.7
Q ss_pred hhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHH
Q 011514 247 TLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACIN 326 (484)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~ 326 (484)
.+....+..++..+.........|.+. +.+|.++.+.+...+...++..++. +..+++.||+|||+.+..+..+.+++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~s~~~~~~~~~~~~~~~~~~~-~~~g~l~dr~g~r~~~~~~~~~~~~~ 98 (496)
T PRK03893 21 AFSAAWLGYLLDGFDFVLITLVLTEVQ-GEFGLTTVQAASLISAAFISRWFGG-LLLGAMGDRYGRRLAMVISIVLFSVG 98 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 344445555555555555555566544 5579999999999999999999888 77799999999999999999888888
Q ss_pred HHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCC
Q 011514 327 MFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPN 406 (484)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~ 406 (484)
.+...+.++.+. +.....+.|++.+...+...+++.|.+|++
T Consensus 99 ~~~~~~~~~~~~--------------------------------------l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~ 140 (496)
T PRK03893 99 TLACGFAPGYWT--------------------------------------LFIARLVIGMGMAGEYGSSATYVIESWPKH 140 (496)
T ss_pred HHHHHHHhHHHH--------------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHcCHH
Confidence 888877666555 244445778888888888899999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 011514 407 EQGKAQGCISGISSFANIVSPLIFSPLTALF 437 (484)
Q Consensus 407 ~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~ 437 (484)
+|+++.++.+....+|..++|.+.+.+.+..
T Consensus 141 ~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 171 (496)
T PRK03893 141 LRNKASGFLISGFSIGAVVAAQVYSLVVPVW 171 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 9999999999999999999999999988754
No 180
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.26 E-value=5.4e-10 Score=109.85 Aligned_cols=178 Identities=12% Similarity=0.047 Sum_probs=126.3
Q ss_pred HHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHH
Q 011514 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPL 88 (484)
Q Consensus 9 ~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~ 88 (484)
..+.+.+..++...+.......+|.+.++. +.+..+.|...+.+.++..++.+..|++.||+|||+.+..+.
T Consensus 206 ~~~~l~~~~~~~~~~~~~~~~~lp~~l~~~--------g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~ 277 (393)
T PRK09705 206 RAWTLGVYFGLINGGYASLIAWLPAFYIEI--------GASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLAL 277 (393)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--------CCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHH
Confidence 344444445555556656666778887664 344456789999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCC-ccchhHHHHHHHHHHHhHHhHHHHhhHhh
Q 011514 89 TLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNIS-ERQRASAFGILLGVLSASFVCGTLAARFL 167 (484)
Q Consensus 89 ~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~ig~~l~~~l 167 (484)
.+..++..+....++. ..... -++.|++. +...|.......|..+ +++|++..+..+....++..+||.+.+.+
T Consensus 278 ~l~~~~~~~~~~~~~~--~~~~~--~~l~g~g~-g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l 352 (393)
T PRK09705 278 VLQLVGFCGFIWLPLQ--LPVLW--AMVCGLGL-GGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVL 352 (393)
T ss_pred HHHHHHHHHHHHccch--HHHHH--HHHHHHhc-cchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8877777665543331 12222 23456544 4445666666677764 67899999999999999999999888875
Q ss_pred -----hhHHHHHHHHHHHHHHHHHHHHHcccCCCCCC
Q 011514 168 -----STTSAFQAATIVSMLAAAYMRVFLKDDVPNDD 199 (484)
Q Consensus 168 -----~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~ 199 (484)
+++..|.+.+...++.......+.||+++++.
T Consensus 353 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (393)
T PRK09705 353 RSISGNYLMDWAFHALCVVGLMIITLRFAPARFPQLW 389 (393)
T ss_pred HHHhCCchHHHHHHHHHHHHHHHHHHHhccccccchh
Confidence 25677777776777666666677777765543
No 181
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.26 E-value=1.9e-10 Score=114.57 Aligned_cols=150 Identities=13% Similarity=0.103 Sum_probs=119.0
Q ss_pred hHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHH
Q 011514 248 LSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINM 327 (484)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~ 327 (484)
+....+..+...+.........|. .++.+|.++.+.+...+...++..+++ +..|++.||+|||+.+..+....+++.
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~s~~~~~~~~~~~~~~~~l~~-~~~g~l~dr~g~r~~l~~~~~~~~~~~ 97 (426)
T PRK12307 20 LFSAWLGYVFDGFDFMLIFYIMYL-IKADLGLTDMEGAFLATAAFIGRPFGG-ALFGLLADKFGRKPLMMWSIVAYSVGT 97 (426)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCChHHHHHHHHHHHHHH
Confidence 344444444444444444444444 455679999999999999999999998 677999999999999999999999988
Q ss_pred HHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCc
Q 011514 328 FICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNE 407 (484)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~ 407 (484)
+...+.++.+. + ...-.+.|++.+...+....++.|..|+++
T Consensus 98 ~~~~~~~~~~~----------l----------------------------~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~ 139 (426)
T PRK12307 98 GLSGLASGVIM----------L----------------------------TLSRFIVGMGMAGEYACASTYAVESWPKHL 139 (426)
T ss_pred HHHHHHhHHHH----------H----------------------------HHHHHHHHHHHhhHHHHHHHHHHHhCCHhH
Confidence 88887776665 2 334447888888888999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 011514 408 QGKAQGCISGISSFANIVSPLIFSPLTALF 437 (484)
Q Consensus 408 ~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~ 437 (484)
|+++.|+......+|..++|.+.+.+.+..
T Consensus 140 r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~ 169 (426)
T PRK12307 140 KSKASAFLVSGFGIGNIIAAYFMPSFAEAY 169 (426)
T ss_pred hhHhhhHHHHHHhHHHHHHHHHHHHHcccC
Confidence 999999999999999999999888877654
No 182
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.25 E-value=3.5e-10 Score=112.98 Aligned_cols=166 Identities=12% Similarity=0.059 Sum_probs=117.0
Q ss_pred hhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHH
Q 011514 247 TLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACIN 326 (484)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~ 326 (484)
.++...+...........+....| ++++. |.++.+.++..+...++..++. +..|++.||+|||+.+..+..+.+++
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~-g~s~~~~g~~~~~~~~~~~~~~-~~~G~l~dr~g~~~~~~~~~~~~~~~ 104 (438)
T TIGR00712 28 VFLGIFFGYAAYYLVRKNFALAMP-YLVEQ-GFSKGELGFALSAISIAYGFSK-FIMGSVSDRSNPRVFLPAGLILSAAV 104 (438)
T ss_pred HHHHHHHHHHHHHHHhccHHhhhH-HHHHc-CCCHhHhHHHHHHHHHHHHHhh-hccchhhhccCCceehHHHHHHHHHH
Confidence 333333333333333333344445 45564 9999999999999999999998 77799999999999998888888887
Q ss_pred HHHHhhccc----hhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcc
Q 011514 327 MFICSISWS----AWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQ 402 (484)
Q Consensus 327 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 402 (484)
.+.....+. .+. +.....+.+++.+...+.....+.|.
T Consensus 105 ~~~~~~~~~~~~~~~~--------------------------------------l~~~~~l~g~~~g~~~~~~~~~i~~~ 146 (438)
T TIGR00712 105 MLLMGFVPWATSSIAI--------------------------------------MFVLLFLNGWFQGMGWPPCGRTMVHW 146 (438)
T ss_pred HHHHhccccccchHHH--------------------------------------HHHHHHHHHHHhhcchHHHHHHHHHh
Confidence 776655421 111 12233366777777778788888999
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCchHHHHHHHHHHH
Q 011514 403 VGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMV 460 (484)
Q Consensus 403 ~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (484)
+|+++||+++|+.+....++..++|.+.+...+...+++. .|.+.+++.++
T Consensus 147 ~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~-------~f~~~~~~~~i 197 (438)
T TIGR00712 147 WSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHA-------ALYFPAICAII 197 (438)
T ss_pred cCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHH-------HHHHHHHHHHH
Confidence 9999999999999999999999999888766553223333 44555554444
No 183
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.22 E-value=7.8e-10 Score=106.83 Aligned_cols=161 Identities=11% Similarity=0.116 Sum_probs=127.7
Q ss_pred hhHHHHHHHHhhhcCcChhh-HHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhhccchhhHHHh
Q 011514 264 GMQASFLYFLKAQFHFNKNQ-FADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVIKIF 342 (484)
Q Consensus 264 ~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (484)
...++...++.+.+|++..+ .|.+++....+..+.. +.+|++.||+|.|+++..+.+...+...+.++..+...
T Consensus 43 ~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~q-Ip~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~---- 117 (511)
T TIGR00806 43 PGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVL-VPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWH---- 117 (511)
T ss_pred chHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHH-HHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHH----
Confidence 44555555777788999999 9999999999999999 77799999999999999999999999999988776555
Q ss_pred hhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHHH
Q 011514 343 FNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFA 422 (484)
Q Consensus 343 ~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg 422 (484)
+ .+.-++.|++.+... ....++.+.+|+++|+++.|..+....+|
T Consensus 118 ------L----------------------------~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG 162 (511)
T TIGR00806 118 ------M----------------------------QLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLG 162 (511)
T ss_pred ------H----------------------------HHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHH
Confidence 3 334448999999888 89999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHHHHHHhcc
Q 011514 423 NIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSH 470 (484)
Q Consensus 423 ~~~gp~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (484)
.++++++.+.+. .+ +... +.. ...+......+++++.+++++
T Consensus 163 ~~Ia~~L~qll~-s~-gWr~---y~~-Ln~Isl~s~~~a~~~a~~LP~ 204 (511)
T TIGR00806 163 VFLSSVLGQLLV-TL-GWIS---YST-LNIISLVFMTFSVFLALFLKR 204 (511)
T ss_pred HHHHHHHHHHHH-hc-Cchh---HHH-HHHHHHHHHHHHHHHHHhCCC
Confidence 999999999944 32 3222 111 234444455556666666653
No 184
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.22 E-value=8e-11 Score=114.96 Aligned_cols=140 Identities=17% Similarity=0.179 Sum_probs=113.6
Q ss_pred HHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhhccch
Q 011514 257 FSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSA 336 (484)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (484)
+.......+....|. +++.+|.+..+.+++.+...++..++. +..|+++||+|||+.+..+..+..++.++..+.++.
T Consensus 6 ~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~-~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~ 83 (379)
T TIGR00881 6 AYYLVRKNFALAMPY-LVEEIGLSKTDLGLLLSSFSIAYGISK-FVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSL 83 (379)
T ss_pred HHHHhHHhhhhhhHH-HHHHhCCCHhHHHHHHHHHHHHHHhhh-hhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhH
Confidence 333444455555564 556679999999999999999999998 677999999999999999999998888888877766
Q ss_pred hhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHH
Q 011514 337 WVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCIS 416 (484)
Q Consensus 337 ~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~ 416 (484)
+. +.....+.|++.+...+...+++.|..|+++|+++.++.+
T Consensus 84 ~~--------------------------------------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 125 (379)
T TIGR00881 84 WV--------------------------------------MAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWN 125 (379)
T ss_pred HH--------------------------------------HHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehh
Confidence 55 2444447788888888999999999999999999999999
Q ss_pred HHHHHHHHHHHH-HHHHHHHh
Q 011514 417 GISSFANIVSPL-IFSPLTAL 436 (484)
Q Consensus 417 ~~~~lg~~~gp~-i~g~l~~~ 436 (484)
....+|..++|. +.+.+.+.
T Consensus 126 ~~~~~g~~~~~~~~~~~~~~~ 146 (379)
T TIGR00881 126 CSHNVGGGLLPPLVLFGIAEL 146 (379)
T ss_pred ccchhHHHHHHHHHHHHHHhc
Confidence 999999999994 55555443
No 185
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=99.22 E-value=4.2e-07 Score=89.57 Aligned_cols=288 Identities=12% Similarity=0.135 Sum_probs=175.6
Q ss_pred hhHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHH-HhhhhhcccccCchhHhH
Q 011514 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVM-MPVIGNLSDQYGRKAMLT 85 (484)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~-~~~~G~l~Dr~Grk~~l~ 85 (484)
.+.+..+.+..|+..+++++.-|.=..+. .+..+.+.....++-+...++..+. .++.+++++|++|++++-
T Consensus 6 ~~k~~~~~l~fF~il~~Y~iLR~lKD~lv-------v~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~ 78 (472)
T TIGR00769 6 LKKFLPLFLMFFCILFNYTILRDTKDTLV-------VTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFY 78 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhee-------ecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHH
Confidence 44555666666666676666655432222 1111112234567777777776666 889999999999999998
Q ss_pred HHHHHHHHHHHHHHhc----cch-h-----------------------hHHHHHHHHHHhhhhccchhhH-hhhHHHhhc
Q 011514 86 LPLTLSIIPLAILAYR----RSI-S-----------------------FFYAYYALRTLTAMVCEGSINC-LALAYVADN 136 (484)
Q Consensus 86 ~~~~~~~i~~~~~~~~----~~~-~-----------------------~~~~l~~~r~l~G~~~~g~~~~-~~~~~i~~~ 136 (484)
.....+.....++++. ++. + ..|..-+..+...+.+ ..... ...++.+|.
T Consensus 79 ~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~-~~vvS~lFW~fandi 157 (472)
T TIGR00769 79 TVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWG-SVVLSLLFWGFANQI 157 (472)
T ss_pred HHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHH-HHHHHHHHHHHHHhc
Confidence 8777777777766654 110 0 0122233333444333 22333 678999999
Q ss_pred CCccchhHHHHHHHHHHHhHHhHHHHhhHhhh------------hH----HHHHHHHHHHHHHHHHHHHHcccCCCCCCC
Q 011514 137 ISERQRASAFGILLGVLSASFVCGTLAARFLS------------TT----SAFQAATIVSMLAAAYMRVFLKDDVPNDDD 200 (484)
Q Consensus 137 ~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~------------~~----~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~ 200 (484)
++.+|-.|..++...+.++|.++|+.+...+. |. ..+.+..+...+ .+.+..++.+....+++
T Consensus 158 ~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~-~~~~~~~l~~~~~~~~~ 236 (472)
T TIGR00769 158 TTIDEAKRFYALFGLGANVALIFSGRTIKYFSKLRASLGPGVDGWHVSLKNLMVIVICSGLA-IILLYWWVNRNVLTDPR 236 (472)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccChHHHHHHHHHHHHHHHHHH-HHHHHHHHHhcccCCcc
Confidence 99999999999999999999999998776643 21 222333323333 33333334332211111
Q ss_pred CCCCCCcccccccccCCCCCCCCccCcccCCCCchHHHHHHhhccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcC
Q 011514 201 DDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFN 280 (484)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 280 (484)
. . +.++ +++.++.+.+..+.++.+.++|.++.+.+...+++......+...-..+++.+ -|
T Consensus 237 ~--~------------~~~~----~~~k~k~k~~~~es~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~-p~ 297 (472)
T TIGR00769 237 S--Y------------NPAL----KEKKVKPKMSTMESLKFLVSSPYILDLALLVIAYGISINLVEVTWKSKLKAQY-PS 297 (472)
T ss_pred c--c------------chhh----ccccCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CC
Confidence 0 0 0000 11112234578888999999999998888888888777777766666666665 34
Q ss_pred hhhH----HHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHH
Q 011514 281 KNQF----ADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAA 323 (484)
Q Consensus 281 ~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~ 323 (484)
+.+. |.+....++...+.+ ++.+++.+|+|-+....+.-++.
T Consensus 298 ~~~~~~f~g~~~~~~gi~tl~~~-l~~~~l~~~~Gw~~~a~i~Pii~ 343 (472)
T TIGR00769 298 PNEYSAFMGDFSTWTGVVSVTMM-LLSGNVIRKYGWLTAALITPLVM 343 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhHHHHHHHHHHHH
Confidence 4443 344455566666666 44489999998877665544443
No 186
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.22 E-value=2e-10 Score=115.90 Aligned_cols=163 Identities=13% Similarity=0.066 Sum_probs=116.7
Q ss_pred HhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHHHHHHHHHHHh---c
Q 011514 25 MMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAY---R 101 (484)
Q Consensus 25 ~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~i~~~~~~~---~ 101 (484)
.......|.+.++. |.+. ...++......++..++.++.|+++||+|||+.+..+..+.+++.++..+ .
T Consensus 301 ~~~~~~~~~~~~~~---g~~~-----~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (481)
T TIGR00879 301 NAIMYYSPTIFENA---GVST-----DHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGAS 372 (481)
T ss_pred eehHHHHHHHHHHc---CCCc-----hHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhc
Confidence 33444556666554 3322 34578888888999999999999999999999999988888887777662 1
Q ss_pred cchh-----hHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHh----hhhHHH
Q 011514 102 RSIS-----FFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF----LSTTSA 172 (484)
Q Consensus 102 ~~~~-----~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~----l~~~~~ 172 (484)
.... ....+....+..+..+ ....+....++.|..|+++|+++.+..+...++|..++|.+.+. .+|++.
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~ 451 (481)
T TIGR00879 373 FVTGSSKSSGNVAIVFILLFIAFFA-MGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGV 451 (481)
T ss_pred ccCCcccchhHHHHHHHHHHHHHHH-ccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccce
Confidence 1110 1222233333333223 33345677788999999999999999999999999999988765 378899
Q ss_pred HHHHHHHHHHHHHHHHHHcccCCC
Q 011514 173 FQAATIVSMLAAAYMRVFLKDDVP 196 (484)
Q Consensus 173 f~~~~~~~~i~~~~~~~~lpe~~~ 196 (484)
|++.++++++..+...++.||+++
T Consensus 452 f~~~~~~~~~~~i~~~~~~~~~~~ 475 (481)
T TIGR00879 452 FIFFGGLNVLGLIFVYFFLPETKG 475 (481)
T ss_pred ehhHHHHHHHHHHHHheecccCCC
Confidence 998888888877777776777553
No 187
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.21 E-value=4.7e-10 Score=110.56 Aligned_cols=178 Identities=8% Similarity=-0.014 Sum_probs=123.2
Q ss_pred cchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHH
Q 011514 245 SVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAAC 324 (484)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~ 324 (484)
+|.++......++..........++|.|+++.+|.++.+.+...+...+...+++ +..|+++||+|||+.+..+....+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~-~~~G~l~Dr~grr~~~~~~~~~~~ 79 (396)
T TIGR00882 1 NTNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQ-PLFGLISDKLGLKKHLLWIISGLL 79 (396)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCcHHHHHHHHHHHH
Confidence 4678888888888888888999999999999899999999999999999999999 666999999999999887666554
Q ss_pred HHHHHHh---hccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhc
Q 011514 325 INMFICS---ISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSK 401 (484)
Q Consensus 325 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 401 (484)
+...... ..+.... + .+ ........+.+++.+...+...++..+
T Consensus 80 ~~~~~~~~~~~~~~~~~--------------~--------~~-----------~~~~~~~~~~g~~~~~~~~~~~~~~~~ 126 (396)
T TIGR00882 80 VLFAPFFIYVFGPLLQS--------------N--------IL-----------VGAIVGGLYLGFVFSAGAGAIEAYIEK 126 (396)
T ss_pred HHHHHHHHHHhhhHHHH--------------H--------HH-----------HHHHHHHHHHHHHhccchhhHHHHHHH
Confidence 4333221 1110000 0 00 001222345566666667777777666
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHHHHHH
Q 011514 402 QVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLM 467 (484)
Q Consensus 402 ~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (484)
..+ +++..+|......++|..++|.++|.+.+. +++. .|.+.+++.++..+..+.
T Consensus 127 ~~~--~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~--~~~~-------~f~~~~~~~~~~~~~~~~ 181 (396)
T TIGR00882 127 VSR--NSNFEYGKARMFGCVGWALCASIAGILFSI--DPQI-------VFWLGSGFALILMLLLMF 181 (396)
T ss_pred hhh--hcccccchhhhhcccHHHHHHHHHhhhhcc--CchH-------HHHHHHHHHHHHHHHHHH
Confidence 433 345677888888999999999999988664 4443 445555544444433333
No 188
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.21 E-value=1.3e-09 Score=107.49 Aligned_cols=149 Identities=11% Similarity=0.037 Sum_probs=119.3
Q ss_pred hHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHH
Q 011514 248 LSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINM 327 (484)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~ 327 (484)
+.......+...+.........|.+ ++.+|.+..+.|++.+...++..+++ +..+++.||+|+|+.+..+..+.+++.
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~-~~~~~~s~~~~g~l~s~~~~g~~i~~-~~~g~l~~r~G~r~~~~~g~~l~~~g~ 82 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQF-QQAFTLTAFQAALVQSAFYGGYFIMA-IPAAIFMKKLSYKAGILLGLFLYALGA 82 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCchHHHHHHHHHHHHHH
Confidence 3444455555555555555667665 66679999999999999999999999 667999999999999999999998888
Q ss_pred HHHhhcc---chhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccC
Q 011514 328 FICSISW---SAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVG 404 (484)
Q Consensus 328 ~~~~~~~---~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p 404 (484)
+++.... +.+. +....++.|.+.+...+..+.++.+..|
T Consensus 83 ~l~~~~~~~~~~~~--------------------------------------~l~~~~l~G~g~g~~~~~~~~~~~~~~~ 124 (410)
T TIGR00885 83 FLFWPAAEIMNYTL--------------------------------------FLVGLFILTAGLGFLETAANPYILVMGP 124 (410)
T ss_pred HHHHHHHhhccHHH--------------------------------------HHHHHHHHHhhHHHHHhhhhHHHHHHCC
Confidence 7764432 2333 1344457889999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 011514 405 PNEQGKAQGCISGISSFANIVSPLIFSPLTAL 436 (484)
Q Consensus 405 ~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~ 436 (484)
++++++..++.+...++|..++|.+.+.+...
T Consensus 125 ~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~ 156 (410)
T TIGR00885 125 ESTATRRLNLAQSFNPFGSIIGMVVAQQLILS 156 (410)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999988643
No 189
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.20 E-value=3.6e-10 Score=113.79 Aligned_cols=133 Identities=10% Similarity=0.007 Sum_probs=106.5
Q ss_pred hhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhh-----ccchhh
Q 011514 264 GMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSI-----SWSAWV 338 (484)
Q Consensus 264 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 338 (484)
.+....|. +.+.+|.+..+.|++.+...++..+++ +..|+++||+|+|+++..+.++.++..+.++. .++.+.
T Consensus 47 ~~~~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~-~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (467)
T PRK09556 47 NFKAAQND-MISTYGLSTTELGMIGLGFSITYGVGK-TLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGL 124 (467)
T ss_pred ChhhhhHH-HHHhcCCCHHHHHHHHHHHHHHHHHHH-hhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccchHHH
Confidence 34445665 445679999999999999999999998 66799999999999998888777766665554 233333
Q ss_pred HHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHH
Q 011514 339 IKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGI 418 (484)
Q Consensus 339 ~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~ 418 (484)
+ ...-.+.|++.+...|...+++.+.+|+++||++.|+.+..
T Consensus 125 ----------l----------------------------~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~ 166 (467)
T PRK09556 125 ----------M----------------------------IALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNIS 166 (467)
T ss_pred ----------H----------------------------HHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecc
Confidence 2 33334778888888899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 011514 419 SSFANIVSPLIFSPLTAL 436 (484)
Q Consensus 419 ~~lg~~~gp~i~g~l~~~ 436 (484)
..+|..+++.+...+.+.
T Consensus 167 ~~lG~~l~~~i~~~~~~~ 184 (467)
T PRK09556 167 HNLGGAGAGGVALWGANY 184 (467)
T ss_pred cchhhhHHHHHHHHHHHh
Confidence 999999999988777664
No 190
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.18 E-value=3e-09 Score=105.78 Aligned_cols=178 Identities=17% Similarity=0.225 Sum_probs=139.5
Q ss_pred hhHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCch--hHh
Q 011514 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRK--AML 84 (484)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk--~~l 84 (484)
.|+....+++.++..-+.+.+......|.++.+ +.+..+...+.-+..+...+++.++|++.||+|.| +++
T Consensus 280 ~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~l-------g~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l 352 (477)
T PF11700_consen 280 LRQLFLFLIAYFLYSDGVNTIISFAGIYATEVL-------GMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTL 352 (477)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHH
Confidence 466777788888888888888888888877554 45555566777778888899999999999999999 888
Q ss_pred HHHHHHHHHHHHHHHh--------ccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhH
Q 011514 85 TLPLTLSIIPLAILAY--------RRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSAS 156 (484)
Q Consensus 85 ~~~~~~~~i~~~~~~~--------~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g 156 (484)
+.+..+..+..+.-.+ .++ -+.+.+.-++.|++. |...+...++.+|..|+++.+..+|++....-..
T Consensus 353 ~~~l~~~~~i~~~g~~G~~~~~~g~~~---~~~f~~~a~~~G~~~-G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~s 428 (477)
T PF11700_consen 353 LISLILWIIIPLYGLFGFWPSFFGLKS---PWEFWVLAVLIGLFM-GGIQSASRSLFSRLIPPGREAEFFGLYAITGKAS 428 (477)
T ss_pred HHHHHHHHHHHHHHHHHhhhcccCccc---HHHHHHHHHHHHHHh-hhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHH
Confidence 8888777555444443 344 577788888999866 7777899999999999999999999999999999
Q ss_pred HhHHHHhhHhh-----hhHHHHHHHHHHHHHHHHHHHHHcccCCC
Q 011514 157 FVCGTLAARFL-----STTSAFQAATIVSMLAAAYMRVFLKDDVP 196 (484)
Q Consensus 157 ~~ig~~l~~~l-----~~~~~f~~~~~~~~i~~~~~~~~lpe~~~ 196 (484)
..+||++-+.+ +.|..+....++.++.+++. ..+++++.
T Consensus 429 s~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll-~~v~~~~g 472 (477)
T PF11700_consen 429 SWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILL-FFVDVEKG 472 (477)
T ss_pred HHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHH-hhccchhh
Confidence 99999988875 25888887776666665555 44665443
No 191
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=99.17 E-value=3.3e-10 Score=108.95 Aligned_cols=156 Identities=20% Similarity=0.195 Sum_probs=125.8
Q ss_pred hhccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHH
Q 011514 242 LRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLF 321 (484)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~ 321 (484)
+..++....+++...+..+......+++--++++. +-.+...|..-... .++-+...++..++.+|+|+.+++..++.
T Consensus 367 ~~~s~~~llff~~av~mG~g~~lv~tFLfWHled~-~~~~~LfGv~~a~~-~~gEI~~~ffs~klI~kiGHv~v~~lgLa 444 (618)
T KOG3762|consen 367 VFASPHILLFFFVAVVMGAGVGLVFTFLFWHLEDL-GGIKTLFGVVSALC-HAGEILFYFFSFKLIEKIGHVNVMYLGLA 444 (618)
T ss_pred HhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhhc-CCcceeeeehhhhh-ccchHHHHHHHHHHHHHhcccceeeehhh
Confidence 34456666666666777777777777777777776 55555557444444 44444444888999999999999999999
Q ss_pred HHHHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhc
Q 011514 322 AACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSK 401 (484)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 401 (484)
+.++-++.+....+.|. ++..-++.|+..+..+...-++++.
T Consensus 445 ~~~~Rf~~~S~L~n~W~--------------------------------------vLPieilqgit~aliWaa~~sY~s~ 486 (618)
T KOG3762|consen 445 CNVGRFLYYSYLQNPWM--------------------------------------VLPIEILQGITHALIWAAIISYASH 486 (618)
T ss_pred HHHHHHHHHHHhcCchh--------------------------------------eeeHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999998 4667778999999999999999999
Q ss_pred ccCCCchhHHHHHHHHH-HHHHHHHHHHHHHHHHHhh
Q 011514 402 QVGPNEQGKAQGCISGI-SSFANIVSPLIFSPLTALF 437 (484)
Q Consensus 402 ~~p~~~~g~~~g~~~~~-~~lg~~~gp~i~g~l~~~~ 437 (484)
..||+.+.+++|+.... ..+|..+|.+++|.+.+.+
T Consensus 487 vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~f 523 (618)
T KOG3762|consen 487 VAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERF 523 (618)
T ss_pred hCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheee
Confidence 99999999999988765 5689999999999999886
No 192
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.16 E-value=2.8e-09 Score=106.88 Aligned_cols=122 Identities=14% Similarity=0.078 Sum_probs=95.7
Q ss_pred HHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhhcc----chhhHHHh
Q 011514 267 ASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISW----SAWVIKIF 342 (484)
Q Consensus 267 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 342 (484)
...| ++.+. |.+..+.+...+...++..+++ +..|+++||+|+|+++..+..+.+++.+.+.+.. +.+.
T Consensus 50 ~~~p-~l~~~-g~s~~~~g~~~~~~~i~~~~~~-~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~---- 122 (452)
T PRK11273 50 LAMP-YLVEQ-GFSRGDLGFALSGISIAYGFSK-FIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAV---- 122 (452)
T ss_pred HhhH-HHHHc-CCCHHHHHHHHHHHHHHHHHHH-hhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHH----
Confidence 3445 45666 9999999999999999999999 6779999999999999999988888887776643 2222
Q ss_pred hhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHHH
Q 011514 343 FNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFA 422 (484)
Q Consensus 343 ~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg 422 (484)
+.....+.|++.+...+.....+.+.+|+++|+++.|+.+....+|
T Consensus 123 ----------------------------------~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 168 (452)
T PRK11273 123 ----------------------------------MFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVG 168 (452)
T ss_pred ----------------------------------HHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhh
Confidence 1333346677777777777788889999999999999999999988
Q ss_pred HHH-HHHH
Q 011514 423 NIV-SPLI 429 (484)
Q Consensus 423 ~~~-gp~i 429 (484)
..+ +|.+
T Consensus 169 ~~~~~~l~ 176 (452)
T PRK11273 169 GGLPPLLF 176 (452)
T ss_pred hhHHHHHH
Confidence 754 4443
No 193
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.15 E-value=8.4e-10 Score=111.68 Aligned_cols=142 Identities=13% Similarity=0.076 Sum_probs=102.9
Q ss_pred HHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHHHHHHHHHHHhcc--chhhHHHHHHHHHHhhhhccchhhHhhhH
Q 011514 54 GFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRR--SISFFYAYYALRTLTAMVCEGSINCLALA 131 (484)
Q Consensus 54 g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~i~~~~~~~~~--~~~~~~~l~~~r~l~G~~~~g~~~~~~~~ 131 (484)
++......+...++.++.|+++||+|||+.++.+.++.+++.++++... +.... ....+.++.+.+......|....
T Consensus 309 ~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 387 (479)
T PRK10077 309 LLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGI-VALLSMLFYVAAFAMSWGPVCWV 387 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccH-HHHHHHHHHHHHHhccccchhHH
Confidence 4555667778889999999999999999999999999888887765432 21111 22223333332222233467889
Q ss_pred HHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhH----------hhhhHHHHHHHHHHHHHHHHHHHHHcccCCC
Q 011514 132 YVADNISERQRASAFGILLGVLSASFVCGTLAAR----------FLSTTSAFQAATIVSMLAAAYMRVFLKDDVP 196 (484)
Q Consensus 132 ~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~----------~l~~~~~f~~~~~~~~i~~~~~~~~lpe~~~ 196 (484)
+++|.+|+++|+++.++......+|.++++.+.. ..+|+..|++.+++.++..++.+++.||+++
T Consensus 388 ~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 462 (479)
T PRK10077 388 LLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKG 462 (479)
T ss_pred HhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHHHHHHHHhccccCCC
Confidence 9999999999999999999999998888754433 3467788888887777777777777787654
No 194
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.14 E-value=6.7e-09 Score=103.54 Aligned_cols=148 Identities=12% Similarity=-0.009 Sum_probs=99.8
Q ss_pred HHHHhchhhhhHHHHHHHHhhhcC---cChhhH---HHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHH
Q 011514 255 AFFSGLSEGGMQASFLYFLKAQFH---FNKNQF---ADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMF 328 (484)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~g---~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~ 328 (484)
.++...-... ..+...++.+.++ .+..+. +..++...++..+++ ++.|+++||+|||+.+..+....+++.+
T Consensus 31 ~~~~~~d~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~-~~~G~l~Dr~Grr~~l~~~~~~~~~~~~ 108 (432)
T PRK10406 31 NLVEWFDFYV-YSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGG-WLFGRIADKHGRKKSMLISVCMMCFGSL 108 (432)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCcHHHHHHHHHHHHHHHH
Confidence 3333333333 3344445555543 444432 333444444455777 7779999999999999999999999998
Q ss_pred HHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCch
Q 011514 329 ICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQ 408 (484)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~ 408 (484)
..++.++...+ ...+...++..| ++.|++.+...|...+++.|..|+++|
T Consensus 109 ~~~~~~~~~~~--~~~~~~~l~~~R----------------------------~l~G~g~g~~~~~~~~~i~e~~p~~~r 158 (432)
T PRK10406 109 VIACLPGYETI--GTWAPALLLLAR----------------------------LFQGLSVGGEYGTSATYMSEVAVEGRK 158 (432)
T ss_pred HHhhcCCchhH--HHHHHHHHHHHH----------------------------HHHHhhhhhhHhhHHHHHHHhCCCCcc
Confidence 88877654320 000111123333 388999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011514 409 GKAQGCISGISSFANIVSPLIFSPLT 434 (484)
Q Consensus 409 g~~~g~~~~~~~lg~~~gp~i~g~l~ 434 (484)
|+..+..+.....|..+++.+...+.
T Consensus 159 g~~~~~~~~~~~~G~~~~~~~~~~~~ 184 (432)
T PRK10406 159 GFYASFQYVTLIGGQLLALLVVVVLQ 184 (432)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999888888888888777655544
No 195
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.14 E-value=9.1e-10 Score=108.10 Aligned_cols=158 Identities=13% Similarity=0.061 Sum_probs=111.0
Q ss_pred HHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHH
Q 011514 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLT 89 (484)
Q Consensus 10 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~ 89 (484)
+.......++...........+|.+.++.. +.+..+.+...+...++..++.++.|+++||+|||+.+.....
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~ 293 (394)
T TIGR00883 221 FLLGLGLVIATTTTFYLITTYLPTYLTQTL-------GLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTV 293 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHH
Confidence 444455555555666666777888886543 2333456788888999999999999999999999998775554
Q ss_pred HHHHHH-H-HHHhc--cchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHH-HHHHHhHHhHHHHhh
Q 011514 90 LSIIPL-A-ILAYR--RSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGIL-LGVLSASFVCGTLAA 164 (484)
Q Consensus 90 ~~~i~~-~-~~~~~--~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~~g~~ig~~l~ 164 (484)
+..+.. . ...+. ++ .+.+....++.|++. +...+...+++.|.+|+++|+++.+.. +....+|..++|.++
T Consensus 294 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~ 369 (394)
T TIGR00883 294 LAALLAVPLLMALLDSGS---FTLFFFLVLGLALIG-GMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIA 369 (394)
T ss_pred HHHHHHHHHHHHHhcCCc---hHHHHHHHHHHHHHH-HHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHH
Confidence 443332 2 22222 33 556666777778644 566678899999999999999999974 566678888999888
Q ss_pred Hhh----h-hHHHHHHHHH
Q 011514 165 RFL----S-TTSAFQAATI 178 (484)
Q Consensus 165 ~~l----~-~~~~f~~~~~ 178 (484)
+.+ + |+..++....
T Consensus 370 g~l~~~~g~~~~~~~~~~~ 388 (394)
T TIGR00883 370 AALVAMTGDWYAIGYYLAA 388 (394)
T ss_pred HHHHHHcCcchhHHHHHHH
Confidence 764 4 6666555543
No 196
>PRK09952 shikimate transporter; Provisional
Probab=99.14 E-value=5.7e-09 Score=104.16 Aligned_cols=167 Identities=16% Similarity=0.142 Sum_probs=107.4
Q ss_pred HHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHHHHHHHH
Q 011514 17 VFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLA 96 (484)
Q Consensus 17 ~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~i~~~ 96 (484)
.+...++........|.+.++.. +.++ .....+.....+...++.+..|+++||+|||+.+..+.++..++.+
T Consensus 259 ~~~~~~~~~~~~~~~~~y~~~~~--g~s~-----~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~ 331 (438)
T PRK09952 259 RLCELLTMYIVTAFALNYSTQNL--GLPR-----ELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAF 331 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc--CCCH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHH
Confidence 33444455555666777765543 2222 2223444455666778888999999999999998888776655544
Q ss_pred HHHh---ccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHH-HHhHHhHHHHhhHhh-----
Q 011514 97 ILAY---RRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGV-LSASFVCGTLAARFL----- 167 (484)
Q Consensus 97 ~~~~---~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~-~~~g~~ig~~l~~~l----- 167 (484)
.... ..+ ..+.+++..++.+++. +...+...++++|.+|.+.|+.+.+..... ..+|..++|.+.+.+
T Consensus 332 ~~~~~~~~~~--~~~~~~~~~~l~~~~~-~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~ 408 (438)
T PRK09952 332 PFFMALEAQS--IFWIVFFSIMLANIAH-DMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFG 408 (438)
T ss_pred HHHHHHHcCC--hHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3322 222 1334444555656543 455567889999999999999888885444 457888888887764
Q ss_pred -hhHHHHHHHHHHHHHHHHHHHHHcccC
Q 011514 168 -STTSAFQAATIVSMLAAAYMRVFLKDD 194 (484)
Q Consensus 168 -~~~~~f~~~~~~~~i~~~~~~~~lpe~ 194 (484)
+|+.++...++..++..+..+ .+||+
T Consensus 409 ~~~~~~~~~~~~~~~i~~v~~~-~~~~~ 435 (438)
T PRK09952 409 GSWHSVAIYLLAGCLISAMTAL-LMKDN 435 (438)
T ss_pred CCchHHHHHHHHHHHHHHHHHH-Hcccc
Confidence 367777777766665555544 46663
No 197
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.14 E-value=3.7e-09 Score=104.36 Aligned_cols=172 Identities=13% Similarity=0.104 Sum_probs=121.7
Q ss_pred HHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhh-----cchH-HHHHhHHHHHH
Q 011514 252 AVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPIL-----GEAK-LLSLGLFAACI 325 (484)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----g~~~-~~~~~~~~~~~ 325 (484)
...++.+..........+|.|+++. |++.++.|.+...... .+.. ++.++++||+ |||| .+..+....++
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~l~~~-g~~~~~ig~~~~~~~~--~~~~-~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l 80 (402)
T PRK11902 5 LLLGFASGLPLALTSGTLQAWMTVE-GLDIQTIGFFSLVGQA--YIFK-FLWAPLMDRYTPPLLGRRRGWLLLTQVGLAA 80 (402)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHH--HHHH-HHHHHHHHcccccCCCcchhHHHHHHHHHHH
Confidence 4456667777777888999999997 9999999988665544 4666 5559999999 6765 67777777777
Q ss_pred HHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCC
Q 011514 326 NMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGP 405 (484)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~ 405 (484)
+...+.+...... +|. +.....+.+...+...+...+++.|..|+
T Consensus 81 ~~~~l~~~~~~~~-----------------------~~~------------l~~~~~~~~~~~~~~~~~~~al~~~~~~~ 125 (402)
T PRK11902 81 SIAAMAFCPPHAA-----------------------LWP------------LAGLAVLVAFLSASQDIVFDAYSTDVLHP 125 (402)
T ss_pred HHHHHHhcCccch-----------------------HHH------------HHHHHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence 7777666532211 000 12233345667777888999999999999
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHHHHHHhc
Q 011514 406 NEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMS 469 (484)
Q Consensus 406 ~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (484)
++|+++.++......+|..+++.+.+.+.+...+.+. .|.+.++..++........+
T Consensus 126 ~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~-------~f~i~a~~~l~~~l~~~~~~ 182 (402)
T PRK11902 126 EERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGN-------TYLLMAGLMLAGALTTLWAP 182 (402)
T ss_pred hhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHH-------HHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999988874323333 34554444444443333343
No 198
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.13 E-value=5.7e-11 Score=112.42 Aligned_cols=178 Identities=11% Similarity=0.126 Sum_probs=136.4
Q ss_pred hhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHH
Q 011514 247 TLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACIN 326 (484)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~ 326 (484)
.+..+.+...+...-.+.....++- .++.+|.++.+.|.+.....+..++.+ .+.|++.||++|++++.+|..+..++
T Consensus 34 ~l~il~~vnlmny~Dr~~iagv~~~-v~~~fni~~s~~Gll~~vf~v~~~i~s-Pl~gyLadryNR~~v~~vG~~iW~~A 111 (493)
T KOG1330|consen 34 TLVILCLVNLMNYADRYTIAGVLKE-VQTYFNISDSELGLLQTVFIVVFMIAS-PLFGYLADRYNRKRVIAVGIFIWTLA 111 (493)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhHH-HHHhcCCCchhccchhHHHHHHHHHHH-HHHHHHHhhcCcceEEeeHHHHHHHH
Confidence 3444444555544444444433333 556679999999999999999999999 66699999999999999999999999
Q ss_pred HHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCC
Q 011514 327 MFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPN 406 (484)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~ 406 (484)
.+..++....|. + .+.=.+.|+|.+...|..+++++|.+|++
T Consensus 112 v~~~~fs~~Fwq----------~----------------------------~l~R~~vGiGeAs~~~ia~s~IaD~f~~~ 153 (493)
T KOG1330|consen 112 VFASGFSNHFWQ----------V----------------------------LLCRGFVGIGEASYSPIAPSLIADSFPDD 153 (493)
T ss_pred HHHHHHHHHHHH----------H----------------------------HHHHHHhccchhhhcccchhHhhhcCcch
Confidence 998888877777 3 33444899999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHHHHHHhccC
Q 011514 407 EQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSHT 471 (484)
Q Consensus 407 ~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (484)
+|++++++.+.....|..+|-..++.+.++...+++.+ ...+++.++..++.....++
T Consensus 154 ~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af-------~~~avl~vi~~~L~~~f~~e 211 (493)
T KOG1330|consen 154 KRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAF-------RGSAVLGVIVGLLVFLFVRE 211 (493)
T ss_pred hhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEE-------EeehHHHHHHHHHHHhhccC
Confidence 99999999999999999999998888888763344433 45555555554444444333
No 199
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.13 E-value=4.7e-09 Score=102.84 Aligned_cols=162 Identities=12% Similarity=0.121 Sum_probs=121.7
Q ss_pred hHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHH
Q 011514 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLP 87 (484)
Q Consensus 8 ~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~ 87 (484)
|.++.+....++...........+|.+.+|. +.+....|...+...++..+..++.|++.||+|+|+.+..+
T Consensus 205 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--------g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~ 276 (382)
T PRK11128 205 PTVWRFLLCVSLLQGSHAAYYGFSAIYWQAA--------GYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLS 276 (382)
T ss_pred hhHHHHHHHHHHHHHHhHhHHHHHHHHHHHC--------CCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
Confidence 3344455555555555555666677777654 33445668888888899999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHH-HHHHhHHhHHHHhhHh
Q 011514 88 LTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILL-GVLSASFVCGTLAARF 166 (484)
Q Consensus 88 ~~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~ig~~l~~~ 166 (484)
.+..+++.++.+..++ .+.+++..++.|++. +...+....++.+. +++++++..+..+ ...++|..+||.++|.
T Consensus 277 ~~~~~~~~~~~~~~~~---~~~~~~~~~l~g~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~ 351 (382)
T PRK11128 277 AICGVVRWGLMGSTTA---LPWLIVIQILHCGTF-TVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGF 351 (382)
T ss_pred HHHHHHHHHHHHhhhh---HHHHHHHHHHHHHHH-HHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998888888888 788888999999754 66677888888887 5667788888876 5567788899999887
Q ss_pred h----hhHHHHHHHHHHHHHH
Q 011514 167 L----STTSAFQAATIVSMLA 183 (484)
Q Consensus 167 l----~~~~~f~~~~~~~~i~ 183 (484)
+ ++ ..++..+.+.++.
T Consensus 352 l~~~~g~-~~~~~~~~~~~~~ 371 (382)
T PRK11128 352 LYQHLGA-GVFWVMALVALPA 371 (382)
T ss_pred HHHhccH-HHHHHHHHHHHHH
Confidence 5 44 4555555555443
No 200
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.13 E-value=4.9e-10 Score=103.94 Aligned_cols=147 Identities=18% Similarity=0.211 Sum_probs=125.3
Q ss_pred CcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhh
Q 011514 278 HFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVIKIFFNKVFKLLLLSFITR 357 (484)
Q Consensus 278 g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 357 (484)
+-+..++|+++....+...+.+ .+.|.+.||+|+|..+.+|+.++..+.+++++..+.+.
T Consensus 102 ~~e~~~iG~LFaskA~~qllvn-p~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~------------------- 161 (464)
T KOG3764|consen 102 DRENTQIGLLFASKALVQLLVN-PFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPM------------------- 161 (464)
T ss_pred cccccchhHHHHHHHHHHHHhc-ccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHH-------------------
Confidence 4566778999999999999999 45599999999999999999999999999999988777
Q ss_pred hhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 011514 358 KQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNE-QGKAQGCISGISSFANIVSPLIFSPLTAL 436 (484)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~-~g~~~g~~~~~~~lg~~~gp~i~g~l~~~ 436 (484)
+++.=.+.|++.+.......+++++.+|+++ ||+++|+.-.+.++|-.+||+++|.+||.
T Consensus 162 -------------------l~vAR~LQgvgsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~ 222 (464)
T KOG3764|consen 162 -------------------LFVARSLQGVGSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEF 222 (464)
T ss_pred -------------------HHHHHHHhhhhHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhh
Confidence 2444558999999999999999999999775 79999999999999999999999999999
Q ss_pred hhcCCCCcccCchHHHHHHHHHHHHHHHHHHhccC
Q 011514 437 FLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSHT 471 (484)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (484)
. |++.|| ++.+++.++...+-++.-+.
T Consensus 223 ~-Gk~aPF-------lVL~~v~Lld~~L~l~vi~p 249 (464)
T KOG3764|consen 223 A-GKSAPF-------LVLAIVLLLDGALQLLVIEP 249 (464)
T ss_pred c-CCcCcH-------HHHHHHHHHHHHHHHheeCc
Confidence 7 888865 77776666666555544333
No 201
>PRK10133 L-fucose transporter; Provisional
Probab=99.13 E-value=7.8e-09 Score=102.95 Aligned_cols=146 Identities=10% Similarity=-0.009 Sum_probs=117.1
Q ss_pred HHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHH
Q 011514 249 SQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMF 328 (484)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~ 328 (484)
....+..+...+.........|.+ ++.+|.++.+.+...+...++..+++ +..+++.||+|+|+++..+..+.+++.+
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~p~i-~~~~~~s~~~~gl~~~~~~~g~~i~~-~~~g~l~dr~G~r~~l~~g~~~~~~~~~ 106 (438)
T PRK10133 29 ALLCSLFFLWAVANNLNDILLPQF-QQAFTLTNFQAGLIQSAFYFGYFIIP-IPAGILMKKLSYKAGIITGLFLYALGAA 106 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 344455566666666667777776 77789999999999999999999999 6779999999999999999999998887
Q ss_pred HHh---hccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCC
Q 011514 329 ICS---ISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGP 405 (484)
Q Consensus 329 ~~~---~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~ 405 (484)
+.. ..++.+. +....++.|++.+...+..+.++.+..|+
T Consensus 107 l~~~~~~a~~~~~--------------------------------------ll~~r~l~G~g~g~~~~~~~~~v~~~~~~ 148 (438)
T PRK10133 107 LFWPAAEIMNYTL--------------------------------------FLVGLFIIAAGLGCLETAANPFVTVLGPE 148 (438)
T ss_pred HHHHHHhcCCHHH--------------------------------------HHHHHHHHHHHHHHHHhhHHHHHHHhCCh
Confidence 652 3444444 23444588999999999999998887776
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011514 406 NEQGKAQGCISGISSFANIVSPLIFSPLT 434 (484)
Q Consensus 406 ~~~g~~~g~~~~~~~lg~~~gp~i~g~l~ 434 (484)
+++++..+..+....+|..++|.+++.+.
T Consensus 149 ~~~~~~~s~~~~~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 149 SSGHFRLNLAQTFNSFGAIIAVVFGQSLI 177 (438)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66667899999999999999999987765
No 202
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.09 E-value=9.5e-10 Score=90.77 Aligned_cols=132 Identities=20% Similarity=0.241 Sum_probs=99.4
Q ss_pred HHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHH
Q 011514 290 IAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKI 369 (484)
Q Consensus 290 ~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 369 (484)
...++..++. ...+++.||+|||+.+..+.....++.+.....++.+.
T Consensus 6 ~~~~~~~~~~-~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------- 53 (141)
T TIGR00880 6 GYALGQLIYS-PLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITV------------------------------- 53 (141)
T ss_pred eehhHHHHHH-hhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHH-------------------------------
Confidence 3455666777 66699999999999998888888887777766555444
Q ss_pred HhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCch
Q 011514 370 LKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGF 449 (484)
Q Consensus 370 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~~~~~~~~ 449 (484)
......+.+++.+...+...++..|..|+++|+++.+..+....++..++|.+.+.+.+.. +++.
T Consensus 54 -------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~------- 118 (141)
T TIGR00880 54 -------LIIARFLQGFGAAFALVAGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFL-GWRA------- 118 (141)
T ss_pred -------HHHHHHHHHHHHHHHHHhHHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhccc-chHH-------
Confidence 1344557788888888889999999999999999999999999999999999999998764 4333
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 011514 450 SIMCIGLASMVAFIQSLMM 468 (484)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~ 468 (484)
.+.+.+...++......+.
T Consensus 119 ~~~~~~~~~~~~~~~~~~~ 137 (141)
T TIGR00880 119 PFLFLAILALAAFILLAFL 137 (141)
T ss_pred HHHHHHHHHHHHHHHHhhc
Confidence 3455544444444444443
No 203
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=99.09 E-value=1e-07 Score=91.12 Aligned_cols=320 Identities=16% Similarity=0.106 Sum_probs=173.3
Q ss_pred HHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHH
Q 011514 54 GFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYV 133 (484)
Q Consensus 54 g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i 133 (484)
|.+.-+-.++.++..+.+.+..+|...+.=.....++..++.++.+++++ .+.-+++-.+.++.. |.--....++
T Consensus 62 ~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~---v~~~l~Gv~las~ss-g~GE~tfL~l- 136 (402)
T PF02487_consen 62 GAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPS---VWVRLLGVVLASLSS-GLGEVTFLSL- 136 (402)
T ss_pred hHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccc---hhHHHHHHHHHhhhh-hhhHHHHHHH-
Confidence 55666677888888888889999988666666677788889999999999 777788888888654 4443344444
Q ss_pred hhcCCccchhHHHHHHHHHHHhHHhHHHHhhHh---h--hhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcc
Q 011514 134 ADNISERQRASAFGILLGVLSASFVCGTLAARF---L--STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPII 208 (484)
Q Consensus 134 ~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~---l--~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~ 208 (484)
+..+++ ...+.++.+.+.+.++|+..-.. + +-|..+.....+.++..+..++.+|+++...+.++.+.+ .
T Consensus 137 t~~y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~~g~s~~~tll~~~~lp~~~~~~~f~~L~~~~~~~~~~~~~~~-~ 211 (402)
T PF02487_consen 137 THFYGK----SSLSAWSSGTGGAGLVGALYYLGLTTLGLSPRTTLLIMLVLPAIFLLSYFFLLPSPPTNRPYQESESE-D 211 (402)
T ss_pred HHhcCc----cccccccCCcChhhHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHhhccccccCCCcccCCC-C
Confidence 445543 34677777777777777643322 2 347777777777766665556666655433221111110 0
Q ss_pred cccccccCCCCCCCCccCcccCCCCchHHHHHHhhcc-chhHHHHHHHHHHhchhhhhHHHHHHHH-hhhcCcChhhHHH
Q 011514 209 TEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSS-VTLSQAAVVAFFSGLSEGGMQASFLYFL-KAQFHFNKNQFAD 286 (484)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~ 286 (484)
+.+++..+. +.+..+.....+.+.++.++..++- +....+.+.++.......+ ..+... .....-...+..+
T Consensus 212 ~~~~~~~~~---~~~~~~~~~~~~~~~~~k~~~~k~Ll~ymiPL~lVY~aEY~InqG---v~~tl~fp~~~~~~r~~Y~~ 285 (402)
T PF02487_consen 212 EAEDDLLES---ETSESKPDSSSKLSFKEKLKRLKPLLWYMIPLFLVYFAEYFINQG---VAPTLLFPNSFFSPRDQYRW 285 (402)
T ss_pred ccccccccc---ccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---hHHHhcCCccCCCHHHHHHH
Confidence 000000000 0000001111122334433322110 1222233333333333333 222221 1221222334455
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHh------hccchhhHHHhhhhHHHHHHHHhhhhhhh
Q 011514 287 LMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICS------ISWSAWVIKIFFNKVFKLLLLSFITRKQI 360 (484)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~f~~~~~~ 360 (484)
+...+.++..+++.-. .-+.-|++.+... +..+-+.++. +.++.|.
T Consensus 286 Y~~~YQ~GVFISRSS~-----~~~rir~lwils~-LQ~~nl~~~~l~s~~~fipsi~i---------------------- 337 (402)
T PF02487_consen 286 YQLLYQLGVFISRSSL-----PFFRIRRLWILSL-LQVINLVFLLLQSWYRFIPSIWI---------------------- 337 (402)
T ss_pred HHHHHHHHHhhhhcce-----eeeehhhHHHHHH-HHHHHHHHHHHHHHHHHhhHHHH----------------------
Confidence 5555555554444221 2222233333222 2222222211 1122222
Q ss_pred hHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 011514 361 SVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPL 433 (484)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l 433 (484)
++..++..|+..|..+......+.+..|+++|..++|......+.|..++..++-.+
T Consensus 338 ----------------vf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 338 ----------------VFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred ----------------HHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 245566778888888888888899999999999999999999998887777665433
No 204
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.08 E-value=1.9e-09 Score=103.70 Aligned_cols=183 Identities=15% Similarity=0.161 Sum_probs=151.5
Q ss_pred hccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcC----cChhhHHHHHHHHHHHHHHHHHHHHHHhhhh-hcchHHHH
Q 011514 243 RSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFH----FNKNQFADLMLIAGLAGTISQLLFMPLLAPI-LGEAKLLS 317 (484)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~g~~~~~~ 317 (484)
.++|.++.++..-+.--+++++....+..|+...++ +|++++...++.++...-+.. +++||++|| +|+|+.+.
T Consensus 18 ~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~-i~GG~laDr~LG~~~tI~ 96 (498)
T COG3104 18 GQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTP-IIGGWLADRVLGTRRTIV 96 (498)
T ss_pred CCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHH-HHHHHHHHHhcchhHHHH
Confidence 356788888889999999999999999999988888 999998888888877777776 888999999 59999999
Q ss_pred HhHHHHHHHHHHHhhcc--chhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHH
Q 011514 318 LGLFAACINMFICSISW--SAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSF 395 (484)
Q Consensus 318 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 395 (484)
.+.++.+++.++++... .... +.+...++..|.|..=|..
T Consensus 97 lGail~~iGh~~L~~~~~~~~~g--------------------------------------l~i~L~~I~iG~Gl~K~Ni 138 (498)
T COG3104 97 LGAILMAIGHLVLAISSVSGPGG--------------------------------------LYIGLALIIVGTGLFKPNI 138 (498)
T ss_pred HHHHHHHHHHHHHhccccccccH--------------------------------------HHHHHHHHHhccccccccH
Confidence 99999999999998874 2222 2555667779999999999
Q ss_pred HHHHhcccCCCc--hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHHHHHHhccCC
Q 011514 396 RSIVSKQVGPNE--QGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSHTP 472 (484)
Q Consensus 396 ~~~~~~~~p~~~--~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (484)
.+++.|.+|+++ |-..+++..+..++|+.++|.+.+++.+.. +++. .|..+++-...+++..+..+++.
T Consensus 139 S~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~-g~~~-------gF~~aavGm~~gl~~f~~~~r~~ 209 (498)
T COG3104 139 SSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINY-GWHV-------GFGLAAVGMIIGLVIFLLGRRHV 209 (498)
T ss_pred HHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhh-CHHH-------HHHHHHHHHHHHHHHHHHccchh
Confidence 999999998653 666788889999999999999999999986 5554 56788888888887777666543
No 205
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.06 E-value=2.7e-09 Score=107.51 Aligned_cols=128 Identities=13% Similarity=0.067 Sum_probs=106.2
Q ss_pred hcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhhcc--chhhHHHhhhhHHHHHHHH
Q 011514 276 QFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISW--SAWVIKIFFNKVFKLLLLS 353 (484)
Q Consensus 276 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 353 (484)
.++++..+.|.+.+...++..+++ +..|++.||+|+|+.+..+.++..++.++..+.. +.+.
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~-~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~--------------- 133 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQ-IPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIAL--------------- 133 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHH-cchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchH---------------
Confidence 568999999999999999999999 7779999999999999988888777766654332 2222
Q ss_pred hhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 011514 354 FITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPL 433 (484)
Q Consensus 354 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l 433 (484)
+...-++.|++.+...|....++.+..|+++|+++.|+.+....+|..++|.+.+.+
T Consensus 134 -----------------------l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l 190 (465)
T TIGR00894 134 -----------------------VVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWL 190 (465)
T ss_pred -----------------------HHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 134445889999999999999999999999999999999999999999999999998
Q ss_pred HHhhhcCCC
Q 011514 434 TALFLSKGA 442 (484)
Q Consensus 434 ~~~~~~~~~ 442 (484)
.+...+.+.
T Consensus 191 ~~~~~gw~~ 199 (465)
T TIGR00894 191 CESWGGWPM 199 (465)
T ss_pred HhccCCCCe
Confidence 876224444
No 206
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.05 E-value=1.2e-08 Score=103.70 Aligned_cols=124 Identities=16% Similarity=0.110 Sum_probs=98.2
Q ss_pred cChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhh
Q 011514 279 FNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRK 358 (484)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~ 358 (484)
.+..+.+.+.+...++..++. ++.+++.||+|||+.+..+.++..++.++..+..+.... .....+
T Consensus 53 ~~~~~~~~~~~~~~ig~~ig~-~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~----~~~~~~--------- 118 (502)
T TIGR00887 53 LPSSVSAAVNGSASIGTLAGQ-LFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPK----SVMATL--------- 118 (502)
T ss_pred chHHHHHHHHHHHHHHHHHHH-HHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccc----hHHHHH---------
Confidence 455566888888899899998 777999999999999999988888887776665431100 000001
Q ss_pred hhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011514 359 QISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTA 435 (484)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~ 435 (484)
...-++.|++.+...+....+++|.+|+++||++.++.+....+|..+++.+...+..
T Consensus 119 -------------------~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~ 176 (502)
T TIGR00887 119 -------------------CFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLA 176 (502)
T ss_pred -------------------HHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444488999999999999999999999999999999999999999999998877654
No 207
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.05 E-value=5.1e-07 Score=87.86 Aligned_cols=322 Identities=13% Similarity=0.073 Sum_probs=192.5
Q ss_pred HHHHHHHHHHHHhhhhhcccccCchhHhHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhc
Q 011514 57 QAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADN 136 (484)
Q Consensus 57 ~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~ 136 (484)
.++-+....++.++.+.+.|+.|.|..+.++......-.+.+-+.++ +.++....+.|++. +..+...-.|++|.
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~N~----y~~yfssallG~Ga-allw~GqG~ylt~~ 130 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFPNS----YYLYFSSALLGFGA-ALLWTGQGGYLTSN 130 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhcch----HHHHHHHHHhhhhH-Hheecccceehhhc
Confidence 66777777888888999999999999999999999988888877766 67789999999754 77677888999999
Q ss_pred CCccchhHHHHHHHHHHHhHHhHHHHhhHhh------------hhH-HH----------HHHHHHHHHHHHHHHH--HHc
Q 011514 137 ISERQRASAFGILLGVLSASFVCGTLAARFL------------STT-SA----------FQAATIVSMLAAAYMR--VFL 191 (484)
Q Consensus 137 ~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l------------~~~-~~----------f~~~~~~~~i~~~~~~--~~l 191 (484)
.++|++.+..++.-+....+.++|...-..+ +.+ .. ..+.+++..+..+... .+.
T Consensus 131 st~~tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~~~ 210 (461)
T KOG3098|consen 131 STRETIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFDFL 210 (461)
T ss_pred CChhhHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhheeec
Confidence 9999999999999999999999887554332 111 11 1111111111111111 111
Q ss_pred ccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHHHHHHhhccchhHHHHHHHHHHhchhhhhHHHHHH
Q 011514 192 KDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLY 271 (484)
Q Consensus 192 pe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (484)
|.+......+ ..+ ....+.++...+. .+++++..+....+..++....+....|.
T Consensus 211 p~~~~~~~~~-----------------------~~~-~~~~~~l~~~~~l-~~~~~ml~L~~~f~~tG~~~Sf~~~iypt 265 (461)
T KOG3098|consen 211 PSKDVVNCKS-----------------------SSE-TSFSELLKLTFKL-LKTPKMLLLFPFFFYTGLETSFWISIYPT 265 (461)
T ss_pred Cccchhhhhh-----------------------hcc-ccHHHHHHHHHHH-hcCHhHHHHHHHHHHHHHHHHHHHhccch
Confidence 1111000000 000 1111223343443 34566666665555555555555555555
Q ss_pred HHhhh--cCcChhh-HHHHHHHHHHHHHHHHHHHHHHhhh---hhcchHHHHHhHHHHHHHHHHHhhccchhh-HHHhhh
Q 011514 272 FLKAQ--FHFNKNQ-FADLMLIAGLAGTISQLLFMPLLAP---ILGEAKLLSLGLFAACINMFICSISWSAWV-IKIFFN 344 (484)
Q Consensus 272 ~~~~~--~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 344 (484)
.+.-. .+.+... .+......+.+..++. ...+.+.| ++|+++++.++..+..+..++.-....... .+
T Consensus 266 ~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g-~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~---- 340 (461)
T KOG3098|consen 266 CISFTRKLGSNTTYLIAIYSIGIGLGEVIGG-LDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLR---- 340 (461)
T ss_pred hhhhhhhccCcchhHHHHHHHHHhHHHHHHH-HHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCC----
Confidence 33322 2333333 3344444555555555 44466665 467788888877776666665543221100 00
Q ss_pred hHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHHHHH
Q 011514 345 KVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANI 424 (484)
Q Consensus 345 ~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~ 424 (484)
+.+.... ...+......+...+.|++.+......+.++.+..| ++|.+++++...-+.++..
T Consensus 341 -----------~t~~~~~------~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~~-~~~~~~fsi~kfyq~~~s~ 402 (461)
T KOG3098|consen 341 -----------PTDSPPL------LFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLYP-DDRAQAFSLFKFYQSVASC 402 (461)
T ss_pred -----------CCccccc------ccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHH
Confidence 0000000 000011123556668899999999999999999995 8888999988888888777
Q ss_pred HHHHHHH
Q 011514 425 VSPLIFS 431 (484)
Q Consensus 425 ~gp~i~g 431 (484)
++-....
T Consensus 403 v~~f~~~ 409 (461)
T KOG3098|consen 403 VAFFFSP 409 (461)
T ss_pred HHhhhhh
Confidence 7655443
No 208
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.05 E-value=1.4e-07 Score=95.43 Aligned_cols=166 Identities=13% Similarity=0.076 Sum_probs=111.1
Q ss_pred HHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHH-HHHHHHHHHHhhhhhcccccCchhHhHHHHHHHHHHH
Q 011514 17 VFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQA-IIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPL 95 (484)
Q Consensus 17 ~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s-~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~i~~ 95 (484)
.++...+........+.+..+.. +.+..+.|+... ...++..++.++.|+++||+|||+.+..+.++.+++.
T Consensus 231 ~~l~~~~~~~~~~~~~~~l~~~~-------G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~ 303 (491)
T PRK11010 231 IVLYKLGDAFAMSLTTTFLIRGV-------GFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSN 303 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 33444444444444455544322 445566788774 5568999999999999999999988777666555544
Q ss_pred HHH---Hhc-cchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHh----h
Q 011514 96 AIL---AYR-RSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF----L 167 (484)
Q Consensus 96 ~~~---~~~-~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~----l 167 (484)
+.+ +.. ++ .+.+...-++..+.. +...+...++..+..+++.+++..++.+...++|..+++.+.|. .
T Consensus 304 l~~~~l~~~~~~---~~~l~~~~~l~~~~~-g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~ 379 (491)
T PRK11010 304 AGYWLLSITDKN---LYSMGAAVFFENLCG-GMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAH 379 (491)
T ss_pred HHHHHHHhcccc---HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 332 333 23 344444455544322 44445678889999999999999999999999998877666665 4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHcccC
Q 011514 168 STTSAFQAATIVSMLAAAYMRVFLKDD 194 (484)
Q Consensus 168 ~~~~~f~~~~~~~~i~~~~~~~~lpe~ 194 (484)
||+..|.+.+++.++..+...+ ++++
T Consensus 380 G~~~~f~~~~~~~l~~l~~~~~-~~~~ 405 (491)
T PRK11010 380 GWPTFYLFSVAAAVPGLLLLLV-CRQT 405 (491)
T ss_pred ChHHHHHHHHHHHHHHHHHHHH-HHhc
Confidence 8999999888777776665554 4554
No 209
>TIGR00898 2A0119 cation transport protein.
Probab=99.04 E-value=9.1e-09 Score=104.88 Aligned_cols=137 Identities=18% Similarity=0.140 Sum_probs=102.6
Q ss_pred HHHHHHHHHHHhhhhhcccccCchhHhHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcC
Q 011514 58 AIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNI 137 (484)
Q Consensus 58 s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~ 137 (484)
....+..+.+.++.++++||+|||+.+..+.++.+++.++..+.++.. .+...+.-++.+.+. +...+....+.+|.+
T Consensus 362 ~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~e~~ 439 (505)
T TIGR00898 362 FISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDL-YFLRTALAVLGKFGI-TSAFQMVYLYTAELY 439 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCc-hHHHHHHHHHHHHHH-HHHHHHHHHHhcccc
Confidence 345566777888899999999999999999999999888888776521 133334444444333 444567889999999
Q ss_pred CccchhHHHHHHHHHHHhHHhHHHHhhHh--hhhHHHHHHHHHHHHHHHHHHHHHcccCCCC
Q 011514 138 SERQRASAFGILLGVLSASFVCGTLAARF--LSTTSAFQAATIVSMLAAAYMRVFLKDDVPN 197 (484)
Q Consensus 138 ~~~~r~~~~~~~~~~~~~g~~ig~~l~~~--l~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~ 197 (484)
|++.|+.++|+.+....+|.+++|.+.+. .++..++.+.+...++..+.. +++||++.+
T Consensus 440 p~~~r~~~~g~~~~~~~ig~~i~p~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lpet~~~ 500 (505)
T TIGR00898 440 PTVVRNLGVGVCSTMARVGSIISPFLVYLGEKWLFLPLVLFGGLALLAGILT-LFLPETKGV 500 (505)
T ss_pred cHHHHhhhHhHHHHHHHHHHHHHhHHHHHHHHHHhhHHHHHHHHHHHHHHHH-HcCcCCCCC
Confidence 99999999999999999999999988873 245667777776666665554 458887543
No 210
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.04 E-value=7.3e-09 Score=100.45 Aligned_cols=133 Identities=14% Similarity=0.094 Sum_probs=103.9
Q ss_pred hhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhhccchhhHHHh
Q 011514 263 GGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVIKIF 342 (484)
Q Consensus 263 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (484)
......+|.+.+ .+|++..+.++..+...++..++. +..+++.||+|+|+.+..+..+..++.+.. ..++.+.
T Consensus 17 ~~~~~~lp~l~~-~~~~s~~~~g~~~s~~~~~~~~~~-~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~---- 89 (355)
T TIGR00896 17 TSVGPLLPQIRS-ALGMSFSVAGLLTALPVLCFAVLA-PLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTAL---- 89 (355)
T ss_pred ccCcccHHHHHH-HhCCCHHHHHHHHHHHHHHHHHHH-HhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHH----
Confidence 334556676555 569999999999999999999999 777999999999999998887777766655 4444443
Q ss_pred hhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHHH
Q 011514 343 FNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFA 422 (484)
Q Consensus 343 ~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg 422 (484)
+.....+.+++.+...+.......|..| ++|+++.|..+....+|
T Consensus 90 ----------------------------------l~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g 134 (355)
T TIGR00896 90 ----------------------------------LFAGTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGG 134 (355)
T ss_pred ----------------------------------HHHHHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHH
Confidence 1333446677777666666777778776 68999999999999999
Q ss_pred HHHHHHHHHHHHHhh
Q 011514 423 NIVSPLIFSPLTALF 437 (484)
Q Consensus 423 ~~~gp~i~g~l~~~~ 437 (484)
..+++.+.+.+.+..
T Consensus 135 ~~i~~~~~~~l~~~~ 149 (355)
T TIGR00896 135 AALAAAATVPLAQHS 149 (355)
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999888764
No 211
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.02 E-value=1.9e-08 Score=98.93 Aligned_cols=167 Identities=10% Similarity=0.016 Sum_probs=112.6
Q ss_pred HHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHH-HHHHHHhhhhhcccccCchhHhHHHH
Q 011514 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGL-GTLVMMPVIGNLSDQYGRKAMLTLPL 88 (484)
Q Consensus 10 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l-~~~~~~~~~G~l~Dr~Grk~~l~~~~ 88 (484)
.+......++...+........+.+.+|. +.+..+.|++...... ...++.++.|++.||+|+|+.+..+.
T Consensus 210 ~~~~~~~~~l~~~~~~~~~~~~~~~l~~~--------G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~ 281 (390)
T TIGR02718 210 AWSLLALALLSAMTAVSGFGLSKLYLVDA--------GWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGV 281 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHhc--------CCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 34445555566666666666777777664 4555677888887764 66677889999999999999998877
Q ss_pred HHHHHHHHHHHhccc---hhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCc-cchhHHHHHHHHHHHhHHhHHHHhh
Q 011514 89 TLSIIPLAILAYRRS---ISFFYAYYALRTLTAMVCEGSINCLALAYVADNISE-RQRASAFGILLGVLSASFVCGTLAA 164 (484)
Q Consensus 89 ~~~~i~~~~~~~~~~---~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~g~~ig~~l~ 164 (484)
.+.++.........+ ......+.....+.++.. +...+...+.+.+..++ +++++.++..+...++|..+||.++
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~ 360 (390)
T TIGR02718 282 GLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLIT-GITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIA 360 (390)
T ss_pred HHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 665333332221111 001233344444545333 45556677777777765 8899999999999999999999998
Q ss_pred Hh----hhhHHHHHHHHHHHHHHHH
Q 011514 165 RF----LSTTSAFQAATIVSMLAAA 185 (484)
Q Consensus 165 ~~----l~~~~~f~~~~~~~~i~~~ 185 (484)
|. .|++..|...+.+.++..+
T Consensus 361 G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 361 GYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHccHHHHHHHHHHHHHHHH
Confidence 86 3678888887766655443
No 212
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.02 E-value=1.6e-08 Score=98.10 Aligned_cols=165 Identities=11% Similarity=0.111 Sum_probs=109.6
Q ss_pred hhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhh-----cchHH-HHHhHHHHHHHHHHHhhccchh
Q 011514 264 GMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPIL-----GEAKL-LSLGLFAACINMFICSISWSAW 337 (484)
Q Consensus 264 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----g~~~~-~~~~~~~~~~~~~~~~~~~~~~ 337 (484)
......|.+.++. |+|..+.+..... .+...+ . ++.+.++||+ ||||. +..+....++....+.+..+..
T Consensus 6 ~~~~~~~~~~~~~-g~s~~~~g~~~~~-~~~~~~-~-~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~ 81 (356)
T TIGR00901 6 LVGNTLPYWLRSK-NVSLKTIGFFSLV-GLPYSL-K-FLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPST 81 (356)
T ss_pred hHHhHHHHHHHHc-CCCHHHHHHHHHH-HHHHHH-H-HHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcch
Confidence 4455677877765 9999999988644 444443 5 5669999997 78776 4566666766666665553321
Q ss_pred hHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHH
Q 011514 338 VIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISG 417 (484)
Q Consensus 338 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~ 417 (484)
. ++. +.....+.+.+.+...+...+++.|.+|+++|+++.|....
T Consensus 82 ~-----------------------l~~------------l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~ 126 (356)
T TIGR00901 82 D-----------------------LPL------------LAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIV 126 (356)
T ss_pred h-----------------------HHH------------HHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHH
Confidence 1 000 12233345666677788889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCC-CcccCchHHHHHHHHHHHHHHHHHHh
Q 011514 418 ISSFANIVSPLIFSPLTALFLSKGA-PFNFPGFSIMCIGLASMVAFIQSLMM 468 (484)
Q Consensus 418 ~~~lg~~~gp~i~g~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (484)
...+|..+++.+.+.+.+..+.... .+.+ ...|.+.+++.++.....++.
T Consensus 127 ~~~~G~~~~~~l~~~l~~~~g~~~~~~~~w-r~~f~i~ai~~l~~~~~~~~~ 177 (356)
T TIGR00901 127 GYRAGMLLSGSLALVLASPEFANTGLITLW-GYIFFWTALLILPGLLVTLFL 177 (356)
T ss_pred HHHHHHHHHHHHHHHHhhhccccccccccc-HHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999887621110 0001 114566666555555444433
No 213
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.02 E-value=3.3e-09 Score=109.90 Aligned_cols=165 Identities=12% Similarity=0.110 Sum_probs=114.4
Q ss_pred hhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhhccchhhHHHh
Q 011514 263 GGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVIKIF 342 (484)
Q Consensus 263 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (484)
.++....-..++++++++..+.|++.+...++..+.. +..+++.||.+|++.+.++.++.+++.+++++.+-... .|.
T Consensus 49 ~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~-i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~-~y~ 126 (633)
T TIGR00805 49 NGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLI-IFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSG-RYS 126 (633)
T ss_pred HHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHH-HHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcC-Ccc
Confidence 3333333345677789999999999999999999998 56699999999999999999999999988876531000 000
Q ss_pred h--------h-hH-HHHHHHHhh------------hhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHh
Q 011514 343 F--------N-KV-FKLLLLSFI------------TRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVS 400 (484)
Q Consensus 343 ~--------~-~~-~~~~~~~f~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 400 (484)
. . .. ...++..-- .++... -+..+..++..-++.|++.+...+...+++.
T Consensus 127 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~ 198 (633)
T TIGR00805 127 YSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHK--------ESLMWLLFLVSQLLRGIGATPIFPLGISYID 198 (633)
T ss_pred ccccccccccccccccccccCCCCCCccccccccccccccC--------CCceehhhHHHHHHHhccCCcchhcCchhhh
Confidence 0 0 00 000000000 000000 0000111244556889999999999999999
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 011514 401 KQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 437 (484)
Q Consensus 401 ~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~ 437 (484)
|.+|+++|++..|+.+....+|..+|+.++|.+.+..
T Consensus 199 d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~ 235 (633)
T TIGR00805 199 DFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIY 235 (633)
T ss_pred ccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999999988764
No 214
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.01 E-value=2.7e-09 Score=98.50 Aligned_cols=116 Identities=16% Similarity=0.123 Sum_probs=96.4
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhh
Q 011514 280 NKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQ 359 (484)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~ 359 (484)
+..-.|++-+.+++...+.+..+ |.++||+|||.++.+|.+..++..++.+...+... +.+.||
T Consensus 66 ~~~yaGflGSsF~ilQ~~sS~~~-G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~a----------fv~aR~----- 129 (451)
T KOG2615|consen 66 SVFYAGFLGSSFSILQFISSPLW-GCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAA----------FVLARF----- 129 (451)
T ss_pred cchhhhhHhhHHHHHHHHhhhhh-hhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHH-----
Confidence 34456788888999999999555 99999999999999999999999888888877633 333344
Q ss_pred hhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011514 360 ISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTA 435 (484)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~ 435 (484)
+.|...+. .....++++|.+++++|+.+++.++...++|.++||.++|++..
T Consensus 130 -----------------------l~Gi~kgn-l~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 130 -----------------------LGGIFKGN-LSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred -----------------------hhhhccCc-hHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 55665554 45678999999999999999999999999999999999999988
No 215
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.99 E-value=5e-08 Score=95.22 Aligned_cols=180 Identities=15% Similarity=0.202 Sum_probs=136.1
Q ss_pred hHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHH
Q 011514 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLP 87 (484)
Q Consensus 8 ~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~ 87 (484)
|.+...++..++...+.+.+....+.|.+|. |. .+....|.+.++..++-++.-...+++..|+|.|+++.++
T Consensus 207 ~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~---gg----~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a 279 (400)
T PF03825_consen 207 PRFLVFLLAAFLIGISHAAYYTFFSIYLQEL---GG----YSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLA 279 (400)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHc---cc----chhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 3445566677777888888888889998876 31 2333457777888888889889999999999999999999
Q ss_pred HHHHHHHHHHHHhc-cchhhH-HHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHH-HHhHHhHHHHhh
Q 011514 88 LTLSIIPLAILAYR-RSISFF-YAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGV-LSASFVCGTLAA 164 (484)
Q Consensus 88 ~~~~~i~~~~~~~~-~~~~~~-~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~-~~~g~~ig~~l~ 164 (484)
.+..++=..+++.. ++.+.. ...+....++|+.- +....+...++.+..|++.|+++.+++.+. .++|..+|..++
T Consensus 280 ~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf-~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~ig 358 (400)
T PF03825_consen 280 LVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTF-GLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIG 358 (400)
T ss_pred HHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHH-HHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHH
Confidence 99999999999987 442111 22333456789754 777789999999999999999999998764 689999999999
Q ss_pred Hhh----------hhHHHHHHHHHHHHHHHHHHHHHcccCC
Q 011514 165 RFL----------STTSAFQAATIVSMLAAAYMRVFLKDDV 195 (484)
Q Consensus 165 ~~l----------~~~~~f~~~~~~~~i~~~~~~~~lpe~~ 195 (484)
|.+ .|...+.+.+.+.++..++.+++.||++
T Consensus 359 G~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~fk~~~ 399 (400)
T PF03825_consen 359 GWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVILFKPKH 399 (400)
T ss_pred HHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhhccCCC
Confidence 874 2345566666666666666666666543
No 216
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.99 E-value=1.5e-08 Score=113.92 Aligned_cols=162 Identities=13% Similarity=0.077 Sum_probs=122.5
Q ss_pred HHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHH-HHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHH
Q 011514 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIY-LSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPL 88 (484)
Q Consensus 10 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~-~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~ 88 (484)
++...+..++...........+|.+..+.+ +.+.. ..|++.+...++.++++++.|+++||+++|+.+.++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~ 306 (1146)
T PRK08633 234 LWLAIIGLSYFWFISQLAQANFPAYAKEVL-------GLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGA 306 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHh-------CCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHH
Confidence 344444444444445556667777776653 23334 6689999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHhh-
Q 011514 89 TLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL- 167 (484)
Q Consensus 89 ~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l- 167 (484)
++.+++.++..+..+ .+.+++..++.|++. +...+...+++.+..|+++|+++++..+....+|..+++.+++.+
T Consensus 307 ~~~~~~~~~~~~~~~---~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~ 382 (1146)
T PRK08633 307 LGLALSLFLLPTAPS---LASVLVLFFLFGFSA-GLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFS 382 (1146)
T ss_pred HHHHHHHHHHHHhhh---HHHHHHHHHHHHHHH-HHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888888888777 677778888888655 666677899999999999999999999999999988888777654
Q ss_pred ----hhHHHHHHHHHHHHH
Q 011514 168 ----STTSAFQAATIVSML 182 (484)
Q Consensus 168 ----~~~~~f~~~~~~~~i 182 (484)
++...+++.+.+.++
T Consensus 383 ~~~~~~~~~~~~~~~~~~~ 401 (1146)
T PRK08633 383 GLGLSPAGLFYLIALVTLI 401 (1146)
T ss_pred HhccCHHHHHHHHHHHHHH
Confidence 234455554444433
No 217
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.98 E-value=2e-08 Score=112.50 Aligned_cols=157 Identities=16% Similarity=0.055 Sum_probs=106.7
Q ss_pred hhccchhHHHHHHHHHHhchhhhhHHHHHHH----HhhhcCcC-hhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHH
Q 011514 242 LRSSVTLSQAAVVAFFSGLSEGGMQASFLYF----LKAQFHFN-KNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLL 316 (484)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~ 316 (484)
+.++++++.++...++..+........++.+ +.+..+.+ ....++..+...+...+.+ ++.|+++||++||+++
T Consensus 7 l~~~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~-~~~G~laDr~~rk~~~ 85 (1140)
T PRK06814 7 LMKSRRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFS-ALAGQLADKYDKAKLA 85 (1140)
T ss_pred hhhccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHh-hhHHhhhhhccHHHHH
Confidence 3455677777777666665544333222222 22221222 2345666777777778888 6779999999999976
Q ss_pred HHhHHH--HHHHHHHHh-hccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhh
Q 011514 317 SLGLFA--ACINMFICS-ISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATP 393 (484)
Q Consensus 317 ~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 393 (484)
.....+ ......... ...+.+. ++...++.|++.+...|
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~s~~~--------------------------------------l~~~~~l~gi~~a~~~p 127 (1140)
T PRK06814 86 KILKFAEIGIAALAIYGFHLNSVPL--------------------------------------LFAALFLMGIHSALFGP 127 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHH--------------------------------------HHHHHHHHHHHHHhhch
Confidence 432222 111111222 2234444 24455588999999999
Q ss_pred HHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 011514 394 SFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 437 (484)
Q Consensus 394 ~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~ 437 (484)
...+++.+.+|++++++++|+.++..++|..+||.++|.+.+..
T Consensus 128 ~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~ 171 (1140)
T PRK06814 128 IKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISG 171 (1140)
T ss_pred HHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999864
No 218
>PRK15075 citrate-proton symporter; Provisional
Probab=98.97 E-value=2.6e-08 Score=99.35 Aligned_cols=156 Identities=13% Similarity=0.048 Sum_probs=108.3
Q ss_pred hHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHH-HHHHH-----HHHHHHHHHHHHhhhhhcchHHHHHhHH
Q 011514 248 LSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLM-LIAGL-----AGTISQLLFMPLLAPILGEAKLLSLGLF 321 (484)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~-----~~~~~~~~~~~~l~~~~g~~~~~~~~~~ 321 (484)
.....+..++...-...+....|...+ .++.++.+.+... +.... ...+++ ++.|++.||+|||+.+..+..
T Consensus 17 ~~~~~~~~~~~~~d~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~-~~~G~l~Dr~Grr~~l~~~~~ 94 (434)
T PRK15075 17 ILRVTSGNFLEMFDFFLFGFYATAIAK-TFFPAGNEFASLMLTFAVFGAGFLMRPLGA-IVLGAYIDRVGRRKGLIVTLS 94 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCCCCchHHHHHHHHHHHHHHHHhhhHH-HHHHHHhhhhchHHHHHHHHH
Confidence 344455556666555666666665544 4587776654332 22111 112455 666999999999999999999
Q ss_pred HHHHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhc
Q 011514 322 AACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSK 401 (484)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 401 (484)
+..++.++.++.++.+... ......+ ...-++.|++.+...+....++.|
T Consensus 95 ~~~~~~~l~~~~~~~~~~~--~~~~~~l----------------------------~~~R~l~G~~~g~~~~~~~~~~~e 144 (434)
T PRK15075 95 IMASGTLLIAFVPGYATIG--LAAPLLV----------------------------LLGRLLQGFSAGVELGGVSVYLAE 144 (434)
T ss_pred HHHHHHHHHHhCCcHHHHH--HHHHHHH----------------------------HHHHHHhhccccccHHHHHHHHHh
Confidence 9999998888877654300 0000001 223337788888888888899999
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011514 402 QVGPNEQGKAQGCISGISSFANIVSPLIFSPLTA 435 (484)
Q Consensus 402 ~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~ 435 (484)
.+|+++|+++.++.+...+++..+++.+++.+..
T Consensus 145 ~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~~ 178 (434)
T PRK15075 145 IATPGRKGFYTSWQSASQQVAVVFAALLGYLLNQ 178 (434)
T ss_pred hCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998888888877654
No 219
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.96 E-value=3.4e-08 Score=97.80 Aligned_cols=196 Identities=10% Similarity=0.020 Sum_probs=127.5
Q ss_pred hHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhh----hhcchHHHHHh-HHH
Q 011514 248 LSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAP----ILGEAKLLSLG-LFA 322 (484)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~g~~~~~~~~-~~~ 322 (484)
+.......+..++.+.....+.+.|+++ +|.++.+.+.......+...+.+ .+.|+++| |+|||+..+.+ ...
T Consensus 6 li~~~~~~~Giq~~~~l~~~~l~~yl~~-lg~~~~~~~~i~~~~~l~~~i~~-Pi~G~lSDr~~sr~GRRrp~il~g~~~ 83 (477)
T TIGR01301 6 LLRVASVAAGVQFGWALQLSLLTPYVQE-LGIPHAWASIIWLCGPLSGLLVQ-PLVGYLSDRCTSRFGRRRPFIAAGAAL 83 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHH-hHeeehhcCCCCCCCChHHHHHHHHHH
Confidence 4445555566667777778888888765 59999999999999999999999 66699999 59999987664 566
Q ss_pred HHHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhh-hhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhc
Q 011514 323 ACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRK-QISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSK 401 (484)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 401 (484)
..+++.++++..+... ...-+. .++ .....+. .+....+..++.....+...+++.|
T Consensus 84 ~~~~l~ll~~~~~~~~----------~~~~~~-~~~~~~~~i~~-----------~~i~~~lld~~~n~~~~p~rALiaD 141 (477)
T TIGR01301 84 VAFAVILIGFAADIGH----------LFGDNL-DKKTKPRAIIV-----------FVVGFWILDVANNMLQGPCRAFLAD 141 (477)
T ss_pred HHHHHHHHHhCchhhh----------hccccc-cccchhHHHHH-----------HHHHHHHHHHHHHHHHHHHHHhccc
Confidence 6667677766554321 000000 000 0000000 1233334556777777888999999
Q ss_pred ccCCCch--hHHHHHHHHHHHHHHHHHHHHHHHH--HHhhhcCC--CCcc----cCchHHHHHHHHHHHHHHHHHHh
Q 011514 402 QVGPNEQ--GKAQGCISGISSFANIVSPLIFSPL--TALFLSKG--APFN----FPGFSIMCIGLASMVAFIQSLMM 468 (484)
Q Consensus 402 ~~p~~~~--g~~~g~~~~~~~lg~~~gp~i~g~l--~~~~~~~~--~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 468 (484)
.+|+++| +.+.+..+...++|+.+|+.+++.. .+.+ +.. .... -....|.+.+++.+++.......
T Consensus 142 l~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~ 217 (477)
T TIGR01301 142 LTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIF-PFTKTEACGVSCANLKSCFLIDIILLAILTYIALSA 217 (477)
T ss_pred ccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhc-ccccccccccccchHHHHHHHHHHHHHHHHHHHeee
Confidence 9998865 6799999999999999999999875 2221 100 0000 11225667777666666655543
No 220
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.96 E-value=2.4e-08 Score=94.15 Aligned_cols=176 Identities=13% Similarity=0.164 Sum_probs=133.0
Q ss_pred hhHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHH
Q 011514 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (484)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~ 86 (484)
++++....++.++..=+.+.+...-..+.. ++.+++..+..++.-..++..+++++++|++.||+|.|+++..
T Consensus 251 ~~~i~~FLiA~~~~~DGv~til~~~~~fg~-------~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~ 323 (438)
T COG2270 251 RKNLVLFLIARFFYIDGVNTILAMGGVFGA-------ADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMI 323 (438)
T ss_pred ccchHHHHHHHHHHHhhHHHHHHHHHHHHH-------HHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehH
Confidence 456666666666666566655555555544 3447777788888888899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHh
Q 011514 87 PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF 166 (484)
Q Consensus 87 ~~~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~ 166 (484)
+.++..+.++...+... -..+.+.-.+.|.+. |.....+.++.++..|+++-++.+|+++.....+..+||.+-+.
T Consensus 324 ~lvi~~~~~~~~~~~~~---~~~f~i~gll~g~s~-G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v 399 (438)
T COG2270 324 GLVILSIAALYLIFLEG---ELDFWILGLLVGTSL-GGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAV 399 (438)
T ss_pred HHHHHHHHHHHHHHccc---cHHHHHHHHHHHHhc-chHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHH
Confidence 99988888877776666 445566667778655 66678999999999999999999999999999999999988877
Q ss_pred h-----hhHHHHHHHHHHHHHHHHHHHHHcccC
Q 011514 167 L-----STTSAFQAATIVSMLAAAYMRVFLKDD 194 (484)
Q Consensus 167 l-----~~~~~f~~~~~~~~i~~~~~~~~lpe~ 194 (484)
+ .-|..+....++..+.++. ...+|++
T Consensus 400 ~t~iTg~~r~g~~~i~vll~iGl~~-L~~v~~~ 431 (438)
T COG2270 400 ITQITGSSRAGVLSIIVLLLIGLLL-LLRVKVP 431 (438)
T ss_pred HHHHhcchhhHHHHHHHHHHhhHhh-EEeecCC
Confidence 5 2366666555444443333 3345554
No 221
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.94 E-value=2e-08 Score=94.59 Aligned_cols=132 Identities=17% Similarity=0.114 Sum_probs=105.2
Q ss_pred HHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhhccchhhHHHhhhhHH
Q 011514 268 SFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVIKIFFNKVF 347 (484)
Q Consensus 268 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (484)
.+...+++.+|+|+.|.+++..+..+.+.+.+ +..+.+.||+|.|+....+.++..+-++.+.+..+.+.
T Consensus 35 ~l~~~i~~~~~LS~~q~~ll~aiPil~GallR-l~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~--------- 104 (417)
T COG2223 35 PLGVFIKSDFGLSEGQKGLLVAIPILVGALLR-LPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPS--------- 104 (417)
T ss_pred HHHhhhccccCCCHHHHHHHHHHHHHHhHHHH-HHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCCc---------
Confidence 34445567889999999999999999999999 55599999999999999999999998888888766542
Q ss_pred HHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHH
Q 011514 348 KLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSP 427 (484)
Q Consensus 348 ~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp 427 (484)
.|. ++....+.|++ +..+......+++.+|||++|.+.|++. .+++|..+..
T Consensus 105 --------------~~~------------ll~~gll~G~~-GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q 156 (417)
T COG2223 105 --------------TWQ------------LLVIGLLLGLA-GASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQ 156 (417)
T ss_pred --------------hHH------------HHHHHHHHhcc-cceehcccccccccCChhhhhHHHHHhc-cccccHHHHH
Confidence 000 13444455554 3455667778899999999999999999 9999988888
Q ss_pred HHHHHHHHhh
Q 011514 428 LIFSPLTALF 437 (484)
Q Consensus 428 ~i~g~l~~~~ 437 (484)
.+...+....
T Consensus 157 ~~~P~v~~~~ 166 (417)
T COG2223 157 LVAPLVAVAF 166 (417)
T ss_pred HHHHHHHHHH
Confidence 8888777765
No 222
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.94 E-value=1.8e-08 Score=100.66 Aligned_cols=148 Identities=16% Similarity=0.163 Sum_probs=107.5
Q ss_pred hHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHH
Q 011514 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLP 87 (484)
Q Consensus 8 ~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~ 87 (484)
|.++.++...++...+........+.+.++.. + +....+++.++..++.+++.+++|+++||+|||+.+..+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~------~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~ 293 (437)
T TIGR00792 222 DQLLILCLAYLFYNLAFNIKNGVQVYYFTYVL--G------DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGG 293 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHcchhheeEeeec--C------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHH
Confidence 44455555556655555554444444443322 1 122456777788999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCC-------ccchhHHHHHHHHHHHhHHhHH
Q 011514 88 LTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNIS-------ERQRASAFGILLGVLSASFVCG 160 (484)
Q Consensus 88 ~~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~-------~~~r~~~~~~~~~~~~~g~~ig 160 (484)
..+.+++.+...+.++. .+.+.+..++.|++. +...+...++++|..| ++++|...++.+....+|..+|
T Consensus 294 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg 370 (437)
T TIGR00792 294 ILLMVLGYLIFFFAGSN--LPLILVLIILAGFGQ-NFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALA 370 (437)
T ss_pred HHHHHHHHHHHHHcchh--HHHHHHHHHHHHHHH-HHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHH
Confidence 98888888777765421 455666777777654 5666788899998875 4567999999999999999999
Q ss_pred HHhhHh
Q 011514 161 TLAARF 166 (484)
Q Consensus 161 ~~l~~~ 166 (484)
+.+.+.
T Consensus 371 ~~i~g~ 376 (437)
T TIGR00792 371 GFLVGL 376 (437)
T ss_pred HHHHHH
Confidence 988776
No 223
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.94 E-value=1.5e-07 Score=90.43 Aligned_cols=183 Identities=11% Similarity=0.065 Sum_probs=140.5
Q ss_pred hHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHH
Q 011514 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLP 87 (484)
Q Consensus 8 ~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~ 87 (484)
|+++.+.+........+.....-.|.|..+++ ++.+.+....|++.++.-+.-++.-.+..++.+|+|.|+.++++
T Consensus 220 ~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f----~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Llla 295 (412)
T PF01306_consen 220 RNFWFFVLFVIGVAAIYDVFDQQFPIYFASFF----QSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLA 295 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS----SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----cccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHH
Confidence 44444444433333344444455777777663 34466777899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHH-HHHHHhHHhHHHHhhHh
Q 011514 88 LTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGIL-LGVLSASFVCGTLAARF 166 (484)
Q Consensus 88 ~~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~~g~~ig~~l~~~ 166 (484)
..+.++=..+++++++ .+.+.+.+.+.|+-. +....+...|+++.+|+|-.++...+. +...++|..+.+.++|.
T Consensus 296 g~i~~iRi~~~~~~~~---~~~i~~~klLH~~e~-~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~ 371 (412)
T PF01306_consen 296 GVIMAIRIIGSGFATN---PWVISLIKLLHALEF-PLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGY 371 (412)
T ss_dssp HHHHHHHHHHHHT--S---HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhcc---hHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHh
Confidence 9999999999999999 899999999999754 666678999999999988877777764 67778888888877776
Q ss_pred ----hhhHHHHHHHHHHHHHHHHHHHHHcccCCCCC
Q 011514 167 ----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPND 198 (484)
Q Consensus 167 ----l~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~ 198 (484)
+|.+..|++.+.+.+...++..+.++++++..
T Consensus 372 lyd~~G~~~tylimg~iv~~~~li~~f~l~~~~~~~ 407 (412)
T PF01306_consen 372 LYDRIGFQHTYLIMGLIVLPFTLISAFTLKKDKKQI 407 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SSSTT
T ss_pred hHhhcCcHHHHHHHHHHHHHHHHHheeeecCCCccc
Confidence 47888999999888888888888888766543
No 224
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=98.91 E-value=8.4e-08 Score=87.47 Aligned_cols=356 Identities=14% Similarity=0.081 Sum_probs=209.4
Q ss_pred HHHHHHhhhhhcccccCchhHhHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccch
Q 011514 63 GTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQR 142 (484)
Q Consensus 63 ~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r 142 (484)
.+++.-.+.=.+.|-.-.|++++.-.+.......+..+.++ .+.+-+.-+..|... +. ..+.++|+-+..+++++
T Consensus 54 SYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~s---V~~mQvlE~FyG~~t-Aa-EIAYysYIYs~Vd~~~Y 128 (433)
T KOG3810|consen 54 SYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPS---VKAMQVLEFFYGPAT-AA-EIAYYSYIYSKVDPEMY 128 (433)
T ss_pred HHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCC---chheeeehhhcChHH-HH-HHhhhheeeeecCHHHH
Confidence 34445555667889998899999988888899999999999 888888899999755 33 35799999999999999
Q ss_pred hHHHHHHHHHHHhHHhHHHHhhHhh------hhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccC
Q 011514 143 ASAFGILLGVLSASFVCGTLAARFL------STTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVN 216 (484)
Q Consensus 143 ~~~~~~~~~~~~~g~~ig~~l~~~l------~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~ 216 (484)
.++.+...+..-.|...|..++-.+ +++..=.+......++.++ ..++|..++..-.+.++++.. ..
T Consensus 129 qrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~-A~fLP~v~rSl~f~~~~~~~~------v~ 201 (433)
T KOG3810|consen 129 KRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLL-ALFLPRVKRSLYFHRLEDKIS------VG 201 (433)
T ss_pred HHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHH-HhhCCCCchhhhhhcccccce------ec
Confidence 9999999999888888887777553 2222222322222233333 345776653321111111110 00
Q ss_pred CCCCCCCccCccc---CCCCchHHHHHHhhccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhc-CcChhhHHHHHHHHH
Q 011514 217 QNESNSPVKIPVC---KKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQF-HFNKNQFADLMLIAG 292 (484)
Q Consensus 217 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~ 292 (484)
+.++..+..+... .....+.+-+....+||++....+-..+...++.....+....-++.- .-.....|..-....
T Consensus 202 ~~e~~~~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~~~~~~vyNG~veAv~t 281 (433)
T KOG3810|consen 202 DLEEMNPQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQILWKEVAPNPANVYNGAVEAVST 281 (433)
T ss_pred cchhcCccchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHHHHHHhhCCCchhhhcCHHHHHHH
Confidence 0011101000000 000011222333557888887777777777777666655555444431 111111244555666
Q ss_pred HHHHHHHHHHHHHhhhhhcchH--HHHHhHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHH
Q 011514 293 LAGTISQLLFMPLLAPILGEAK--LLSLGLFAACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKIL 370 (484)
Q Consensus 293 ~~~~~~~~~~~~~l~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~ 370 (484)
+.+++.. +..|.+.-++.|.. ++..+....+...+.+....+.|.
T Consensus 282 lLGa~~~-~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~-------------------------------- 328 (433)
T KOG3810|consen 282 LLGAIAA-LAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWV-------------------------------- 328 (433)
T ss_pred HHHHHHH-HHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceeh--------------------------------
Confidence 6677776 66677766555543 444555556666666666666666
Q ss_pred hhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh---hcCCCCcccC
Q 011514 371 KSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF---LSKGAPFNFP 447 (484)
Q Consensus 371 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~---~~~~~~~~~~ 447 (484)
.-...+++........+.....+++....|.-|-.+|++.++.-+-+.+-..+ +.|.. .....-+...
T Consensus 329 ------~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~~gLvFGiNTFvAl~lQsilT~i---Vvd~~g~~L~ir~Q~~~Y 399 (433)
T KOG3810|consen 329 ------CYAGYVLFRVIYQLTITIATFQIARNLSSELFGLVFGINTFVALILQSILTLI---VVDDRGLGLDIRTQFVVY 399 (433)
T ss_pred ------hhhhHHHHHhhHhhhhhHHHHHHHHhhhhhhheeeeehHHHHHHHHHHhheEE---EEcccccCCCcceeEEEE
Confidence 12223355566666677777777888888899999999888766555443333 23321 1122223333
Q ss_pred chHHHHHHHHHHHHHHHHHHhccCC
Q 011514 448 GFSIMCIGLASMVAFIQSLMMSHTP 472 (484)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (484)
+.-|++.+++.++.....+...++.
T Consensus 400 ~~Yf~v~~~i~~~~~~~~~~~~~~~ 424 (433)
T KOG3810|consen 400 SSYFIVLGVIFLIGFGIEYLMCRRN 424 (433)
T ss_pred eehHHHHHHHHHHHHHHHHHHhhcC
Confidence 4456777777777765554444433
No 225
>PTZ00207 hypothetical protein; Provisional
Probab=98.90 E-value=1.6e-07 Score=95.17 Aligned_cols=125 Identities=9% Similarity=0.157 Sum_probs=94.1
Q ss_pred HHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhhcc------chhhHHHhh
Q 011514 270 LYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISW------SAWVIKIFF 343 (484)
Q Consensus 270 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 343 (484)
...+++.+|+|..+.+.+.+.. ......+ +..|++.||+|+|+++.++.++..++.++.++.. +.+.
T Consensus 50 s~~L~~~lgls~~~l~~i~svg-~~~g~~~-lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~----- 122 (591)
T PTZ00207 50 SGAMQARYNLTQRDLSTITTVG-IAVGYFL-LPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVR----- 122 (591)
T ss_pred HHHHHHHhCcCHHHHHHHHHHH-HHHHHHH-HHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHH-----
Confidence 3346777899999998887663 3334455 4569999999999999999999999998888752 2232
Q ss_pred hhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHHHH
Q 011514 344 NKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFAN 423 (484)
Q Consensus 344 ~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~ 423 (484)
+.+...+.|.+.+...+.....+.+.+| ++||++.|+......+|.
T Consensus 123 ---------------------------------l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGs 168 (591)
T PTZ00207 123 ---------------------------------LSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGS 168 (591)
T ss_pred ---------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHH
Confidence 1333446777777777777778888887 789999999999999999
Q ss_pred HHHHHHHHHHHH
Q 011514 424 IVSPLIFSPLTA 435 (484)
Q Consensus 424 ~~gp~i~g~l~~ 435 (484)
.+.+.+...++.
T Consensus 169 aI~~~l~~~l~~ 180 (591)
T PTZ00207 169 AILGSIQLAFFS 180 (591)
T ss_pred HHHHHHHHHHHH
Confidence 865555554443
No 226
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.88 E-value=2.1e-08 Score=99.16 Aligned_cols=154 Identities=15% Similarity=0.177 Sum_probs=123.1
Q ss_pred hhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHH
Q 011514 274 KAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVIKIFFNKVFKLLLLS 353 (484)
Q Consensus 274 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (484)
+..+.+++.+.+++++....+.++++ +-++++.||+|.|+++..+.++.++..++.++..+... ..+++.|
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~-iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~--------~~~~~~R 135 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQ-IPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGF--------YLLLVLR 135 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHH-cCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcc--------hhhHHHH
Confidence 34678999999999999999999999 66699999999999999999999999988887654332 0134444
Q ss_pred hhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 011514 354 FITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPL 433 (484)
Q Consensus 354 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l 433 (484)
+ +.|++.+..+|....+..+-.|+++|++..++.....++|.+++-++.|.+
T Consensus 136 ~----------------------------lqGl~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~l 187 (466)
T KOG2532|consen 136 F----------------------------LQGLGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLL 187 (466)
T ss_pred H----------------------------HhHHHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 4 899999999999999999999999999999999999999999999999999
Q ss_pred HHhhhcCCCCcccCchHHHHHHHHHHH-HHHHHHHhccC
Q 011514 434 TALFLSKGAPFNFPGFSIMCIGLASMV-AFIQSLMMSHT 471 (484)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 471 (484)
.+...|... .|.+.+++.++ ..++.+...++
T Consensus 188 c~s~~GW~s-------ifY~~g~~g~i~~~~w~~~~~d~ 219 (466)
T KOG2532|consen 188 CESSLGWPS-------IFYVFGIVGLIWFILWFLFYSDS 219 (466)
T ss_pred hccCCCCch-------HHHHHHHHHHHHHHHHHHHhcCC
Confidence 987325544 44555554444 33333444433
No 227
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.86 E-value=2.2e-07 Score=87.08 Aligned_cols=147 Identities=16% Similarity=0.028 Sum_probs=117.6
Q ss_pred HHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhhc
Q 011514 254 VAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSIS 333 (484)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 333 (484)
+.|+.+.........+...+++.++.+..|++.+......+..+.+ +-.+++.||+|+|+-+..++.++++++.++.-+
T Consensus 20 ~lFfl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~-lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pA 98 (422)
T COG0738 20 SLFFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMS-LPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPA 98 (422)
T ss_pred HHHHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHh-ccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhh
Confidence 3344444444455566667888899999999999988888888887 777999999999999999999999999888644
Q ss_pred cchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHH
Q 011514 334 WSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQG 413 (484)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g 413 (484)
.+.... ...+...++.+.|.+......+.+++..-|++...+-+.
T Consensus 99 a~~~~y-----------------------------------~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rln 143 (422)
T COG0738 99 ASSKSY-----------------------------------GFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLN 143 (422)
T ss_pred hhhhhH-----------------------------------HHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHH
Confidence 332220 001444557888888889999999999999988899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Q 011514 414 CISGISSFANIVSPLIFSPLTAL 436 (484)
Q Consensus 414 ~~~~~~~lg~~~gp~i~g~l~~~ 436 (484)
+.+.++.+|..++|++++.+..+
T Consensus 144 l~q~fn~lGa~~gp~~g~~lils 166 (422)
T COG0738 144 LAQAFNGLGAILGPLLGSSLILS 166 (422)
T ss_pred HHHHhhhhHHHHHHHHHHHHHHh
Confidence 99999999999999999999884
No 228
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.81 E-value=3.6e-07 Score=89.73 Aligned_cols=149 Identities=16% Similarity=0.132 Sum_probs=107.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHHHHHHHHHHHhccch---h--hH-HHHHHHHHHhhhhccc
Q 011514 50 IYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSI---S--FF-YAYYALRTLTAMVCEG 123 (484)
Q Consensus 50 ~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~i~~~~~~~~~~~---~--~~-~~l~~~r~l~G~~~~g 123 (484)
....-+..........+..++...+.||+|||+.++.+..+..+..+++...... . +. +..+++.++..++-+-
T Consensus 304 ~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~ 383 (485)
T KOG0569|consen 304 PEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAI 383 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhc
Confidence 3344566667778888888899999999999999999999998888877765322 1 11 1223444444433333
Q ss_pred hhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHH----HHhhHhhhhHHHHHHHHHHHHHHHHHHHHHcccCCCCCC
Q 011514 124 SINCLALAYVADNISERQRASAFGILLGVLSASFVCG----TLAARFLSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDD 199 (484)
Q Consensus 124 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig----~~l~~~l~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~ 199 (484)
...|...-+.+|.+|++.|+.+.++......+...+- |.+-..+|- +.|....+...+..++.++.+||++.+..
T Consensus 384 G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPETkgr~~ 462 (485)
T KOG0569|consen 384 GPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPETKGRTP 462 (485)
T ss_pred CCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcccCCCCH
Confidence 3447889999999999999999999888877765443 333444555 67777777888888999999999986543
No 229
>PRK09848 glucuronide transporter; Provisional
Probab=98.79 E-value=1e-07 Score=95.59 Aligned_cols=151 Identities=12% Similarity=0.078 Sum_probs=107.5
Q ss_pred hhHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHH
Q 011514 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (484)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~ 86 (484)
+|.+....+..++...+........|.+.++.+ +.+....++......++.+++.+++++++||+|+|+.+..
T Consensus 227 n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~ 299 (448)
T PRK09848 227 NRPLFMLCIGALCVLISTFAVSASSLFYVRYVL-------NDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLI 299 (448)
T ss_pred CchHHHHHHHHHHHHHHHHHHhhhheeeEeeec-------CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHH
Confidence 345555555566666665555555666655432 2223333444444567788899999999999999999999
Q ss_pred HHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCcc-------chhHHHHHHHHHHHhHHhH
Q 011514 87 PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISER-------QRASAFGILLGVLSASFVC 159 (484)
Q Consensus 87 ~~~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~-------~r~~~~~~~~~~~~~g~~i 159 (484)
+.++.+++.++..+.++.. .+.+++..++.|++. +...+...++.+|..|++ ++|...+..+....+|..+
T Consensus 300 g~~~~~i~~~~~~~~~~~~-~~~~~~~~~l~g~G~-~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~ai 377 (448)
T PRK09848 300 GALLGTCGYLLFFWVSVWS-LPVALVALAIASIGQ-GVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAI 377 (448)
T ss_pred HHHHHHHHHHHHHHcCchh-HHHHHHHHHHHHHHH-HHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHH
Confidence 9998888888777654211 455666677788654 666678899999988754 3588899999999999999
Q ss_pred HHHhhHh
Q 011514 160 GTLAARF 166 (484)
Q Consensus 160 g~~l~~~ 166 (484)
|+.+.+.
T Consensus 378 g~~i~g~ 384 (448)
T PRK09848 378 GGSIPAF 384 (448)
T ss_pred HHHHHHH
Confidence 9877765
No 230
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.77 E-value=1.5e-07 Score=94.37 Aligned_cols=172 Identities=18% Similarity=0.277 Sum_probs=139.5
Q ss_pred hHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccC--chhHhH
Q 011514 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYG--RKAMLT 85 (484)
Q Consensus 8 ~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~G--rk~~l~ 85 (484)
+.+..+.+...+..++.....-.+|.+.++. +.++ .....+.++.++...++.+..|+++|+.. ++.+..
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~---g~~~-----~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~ 369 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAKSL---GLSS-----NDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFL 369 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---CCCh-----hhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHH
Confidence 4566677777888888888888888888765 4433 45578899999999999999999999988 455677
Q ss_pred HHHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhH
Q 011514 86 LPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAAR 165 (484)
Q Consensus 86 ~~~~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~ 165 (484)
++.+..+++....++.++ ++.+...-.+.|+.. |.........+.|..+.++-+.+.|+.....+++.++||.+++
T Consensus 370 ~~ll~~gl~~~~~p~~~~---~~~l~~~~~~fG~~~-g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag 445 (509)
T KOG2504|consen 370 LTLLIAGLARLFLPFATT---YVGLIVFSILFGFCV-GSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAG 445 (509)
T ss_pred HHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccce
Confidence 888888999999999999 888899999999654 7776666678999999999999999999999999999999998
Q ss_pred hh-----hhHHHHHHHHHHHHHHHHHHHHHcc
Q 011514 166 FL-----STTSAFQAATIVSMLAAAYMRVFLK 192 (484)
Q Consensus 166 ~l-----~~~~~f~~~~~~~~i~~~~~~~~lp 192 (484)
.+ .|...|+..+...++..... +..|
T Consensus 446 ~~~d~tg~Y~~~f~~~g~~~~~s~~~~-~~~~ 476 (509)
T KOG2504|consen 446 LLYDITGNYDHAFYFCGLCFLLSAVLL-LILR 476 (509)
T ss_pred eeeeccCCeeeehhhcChHHHHHHHHH-HHhH
Confidence 74 37788988886666655443 3345
No 231
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.76 E-value=3.4e-07 Score=92.27 Aligned_cols=127 Identities=16% Similarity=0.143 Sum_probs=93.2
Q ss_pred HHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhhccchhhHHHhhhhH
Q 011514 267 ASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVIKIFFNKV 346 (484)
Q Consensus 267 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (484)
+.++...+ ..|-++. ..++.....+...+.. .+.|+++|.+|||+.++.+.++..++.++.+-.++...
T Consensus 65 ~~l~~I~~-diG~~~~-~~w~~~~~~l~~av~~-~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~-------- 133 (599)
T PF06609_consen 65 SILPYINA-DIGGSDN-WSWFSTAWTLASAVSF-PFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNT-------- 133 (599)
T ss_pred HHHHHHHH-hcCCCcc-chHHHHHHHHHHHHHH-HhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHH--------
Confidence 34444444 4476544 4788888888888888 55699999999999999999999999999998888766
Q ss_pred HHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHH
Q 011514 347 FKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVS 426 (484)
Q Consensus 347 ~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~g 426 (484)
++....+.|++.+... .....++|..|.+.|+...++.....-.....+
T Consensus 134 ------------------------------~iag~~l~GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~ 182 (599)
T PF06609_consen 134 ------------------------------FIAGMVLYGVGAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWIS 182 (599)
T ss_pred ------------------------------HHHHHHHHHHhhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhccc
Confidence 3556667777755544 455668999999999887776665554445566
Q ss_pred HHHHHHHHH
Q 011514 427 PLIFSPLTA 435 (484)
Q Consensus 427 p~i~g~l~~ 435 (484)
|.+...+..
T Consensus 183 ~~ia~~~~~ 191 (599)
T PF06609_consen 183 PLIAQLFAA 191 (599)
T ss_pred HHHHHHhcc
Confidence 666655543
No 232
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.75 E-value=3.1e-07 Score=91.47 Aligned_cols=148 Identities=19% Similarity=0.220 Sum_probs=122.3
Q ss_pred hhHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHH
Q 011514 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (484)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~ 86 (484)
+|.+..++...++..++........+.+.++.+ +.+ ...+.+..+..++..++.+++++++||+|+|+.+..
T Consensus 224 nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl--~~~------~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~ 295 (428)
T PF13347_consen 224 NRPFRILLLAFFLQWLAFALMNTFLPYYFTYVL--GNE------GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYII 295 (428)
T ss_pred cchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHh--cCc------hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhh
Confidence 566777888888888888888888888888875 322 234677788999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcc--chhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCc-------cchhHHHHHHHHHHHhHH
Q 011514 87 PLTLSIIPLAILAYRR--SISFFYAYYALRTLTAMVCEGSINCLALAYVADNISE-------RQRASAFGILLGVLSASF 157 (484)
Q Consensus 87 ~~~~~~i~~~~~~~~~--~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~-------~~r~~~~~~~~~~~~~g~ 157 (484)
+..+.+++.++..+.+ + .+.+++.-++.|++. +...+...++++|..+. ++.|..++..+....+|.
T Consensus 296 ~~~~~~~~~~~~~~~~~~~---~~~~~i~~~l~gi~~-~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~ 371 (428)
T PF13347_consen 296 GLLLAALGFLLLFFLGPGS---PWLVLILFILAGIGY-GAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQ 371 (428)
T ss_pred hHHHHHHHHHHHHHHHhhh---HHHHHHHHHHhHhhh-cccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHH
Confidence 9999999999988886 6 788889999999766 66667899999999873 334778888888888888
Q ss_pred hHHHHhhHh
Q 011514 158 VCGTLAARF 166 (484)
Q Consensus 158 ~ig~~l~~~ 166 (484)
.+++.+.+.
T Consensus 372 ~la~~i~g~ 380 (428)
T PF13347_consen 372 GLAGAIVGL 380 (428)
T ss_pred HHHHHHHHH
Confidence 888876654
No 233
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.70 E-value=1.3e-06 Score=82.25 Aligned_cols=161 Identities=24% Similarity=0.309 Sum_probs=121.7
Q ss_pred HHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHHHH
Q 011514 13 LFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSI 92 (484)
Q Consensus 13 l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~ 92 (484)
.....+....+.....+..+.+..+. +.+.. . ...++..+.+.++..++.++.|.++||+|||+.+..+.....
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~--~-~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~ 80 (338)
T COG0477 7 LALAALLLGLDLGLLSPALPLLLSTL---SLSSG--R-LLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFL 80 (338)
T ss_pred HHHHHHHHHHhcchHHHHHHHHHHHc---CCCch--h-HHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHH
Confidence 44445555566777777888887765 21111 0 356899999999999999999999999999988888887666
Q ss_pred HHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCc-cchhHHHHHHHH-HHHhHHhHHHHhhHhh---
Q 011514 93 IPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISE-RQRASAFGILLG-VLSASFVCGTLAARFL--- 167 (484)
Q Consensus 93 i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~-~~r~~~~~~~~~-~~~~g~~ig~~l~~~l--- 167 (484)
++.+...+..+ ...+.+.+.|+.+|++. +...+...+++.|+.|+ ++|+...+.... ...+|..++|.+++.+
T Consensus 81 ~~~~~~~~~~~-~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T COG0477 81 LGTLLLALAPN-VGLALLLILRLLQGLGG-GGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA 158 (338)
T ss_pred HHHHHHHhCcc-chHHHHHHHHHHHHhhh-HHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666666655 33688899999999755 67778999999999988 788999998888 5888888888777653
Q ss_pred ---hhHHHHHHHHHHHH
Q 011514 168 ---STTSAFQAATIVSM 181 (484)
Q Consensus 168 ---~~~~~f~~~~~~~~ 181 (484)
+||..|........
T Consensus 159 ~~~~~~~~~~~~~~~~~ 175 (338)
T COG0477 159 LLWGWRAAFLLAALLGL 175 (338)
T ss_pred HhcchHHHHHHHHHHHH
Confidence 68886666554443
No 234
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.70 E-value=5e-06 Score=85.88 Aligned_cols=134 Identities=16% Similarity=0.129 Sum_probs=95.7
Q ss_pred HHHHHHHHHHHHHHHhhhhhcccc-cCchhHhHHHHHHHHHHHHHHHhccch-----hhHHHHHHHHHHhhhhccchhhH
Q 011514 54 GFQQAIIGLGTLVMMPVIGNLSDQ-YGRKAMLTLPLTLSIIPLAILAYRRSI-----SFFYAYYALRTLTAMVCEGSINC 127 (484)
Q Consensus 54 g~~~s~~~l~~~~~~~~~G~l~Dr-~Grk~~l~~~~~~~~i~~~~~~~~~~~-----~~~~~l~~~r~l~G~~~~g~~~~ 127 (484)
..+...+....-+...+.|.++|+ +||++.+.++.++..++..+.++.... ......+++-.+..++ .|..-|
T Consensus 26 ~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~G-~GgiKp 104 (654)
T TIGR00926 26 TVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIALG-TGGIKP 104 (654)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHhh-cccccc
Confidence 444555555556667779999997 599999999999999999888775321 1112234444444434 477778
Q ss_pred hhhHHHhhcCCcc---chhHHHHHHHHHHHhHHhHHHHhhHhh-----------hhHHHHHHHHHHHHHHHHHHH
Q 011514 128 LALAYVADNISER---QRASAFGILLGVLSASFVCGTLAARFL-----------STTSAFQAATIVSMLAAAYMR 188 (484)
Q Consensus 128 ~~~~~i~~~~~~~---~r~~~~~~~~~~~~~g~~ig~~l~~~l-----------~~~~~f~~~~~~~~i~~~~~~ 188 (484)
+..+...|.++++ +|.+.+.+...+.++|.++++.+...+ +|...|.+.++..++.++...
T Consensus 105 ~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~ 179 (654)
T TIGR00926 105 CVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIVFM 179 (654)
T ss_pred CchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHH
Confidence 9999999999754 366788888889999999887776543 488888888877766655544
No 235
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.68 E-value=9.9e-07 Score=78.44 Aligned_cols=148 Identities=18% Similarity=0.216 Sum_probs=105.2
Q ss_pred hhHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHH
Q 011514 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (484)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~ 86 (484)
+..+|.+....+.......-....-|.+.++.+ +.|+...|-+.+.-..-.++.+|+.|.++||+||+...+.
T Consensus 263 ~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rf-------GlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~ 335 (459)
T KOG4686|consen 263 YPPFWVLVIICVLYYVAWFPFITLGPMFFQKRF-------GLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVA 335 (459)
T ss_pred CccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhh-------CCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHH
Confidence 445666666666665555444445555666554 5555566777777788888999999999999999987765
Q ss_pred H-HHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhH
Q 011514 87 P-LTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAAR 165 (484)
Q Consensus 87 ~-~~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~ 165 (484)
+ ++...++-....++. +.=+.+..+.|+.. ..........++-..|+++.|.+.+..+...++|..+.|++++
T Consensus 336 ~a~~~tl~~H~~l~Ft~-----lsPy~~m~~lGLsy-sllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag 409 (459)
T KOG4686|consen 336 SACILTLLGHSGLFFTF-----LSPYTSMTFLGLSY-SLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAG 409 (459)
T ss_pred HHHHHHHHHhhhHHhhh-----ccHHHHHHHHhhhH-HHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhh
Confidence 5 444555555544432 12245566778633 3333346788999999999999999999999999999999998
Q ss_pred hh
Q 011514 166 FL 167 (484)
Q Consensus 166 ~l 167 (484)
.+
T Consensus 410 ~i 411 (459)
T KOG4686|consen 410 FI 411 (459)
T ss_pred ee
Confidence 75
No 236
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=98.68 E-value=1.4e-05 Score=77.21 Aligned_cols=389 Identities=12% Similarity=0.089 Sum_probs=190.0
Q ss_pred HHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhccc-----ccCchhHhH
Q 011514 11 SHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSD-----QYGRKAMLT 85 (484)
Q Consensus 11 ~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~D-----r~Grk~~l~ 85 (484)
.++.+..++.++-.++..-.+|.++++.. -+.+-.+.|. .|....++- .-++|.++.| |+||||..+
T Consensus 3 ~lL~~LY~lQGiP~GL~~gsiPflL~~~~------~~~sy~q~~~-fSla~~PfS-lKlLWaPiVDs~y~~~~GRRKSWi 74 (544)
T PF13000_consen 3 ALLVLLYFLQGIPLGLAFGSIPFLLQSMA------KKVSYSQQAI-FSLASYPFS-LKLLWAPIVDSVYSKRIGRRKSWI 74 (544)
T ss_pred eHHHHHHHHcCcccccccccchhhhcccc------CCCChhHhee-eeeeechhH-HHHhhhhhhhhhcccccCCcchhh
Confidence 34566667777777777677888887610 0222223332 111111211 2345666666 899999866
Q ss_pred HH-HHHHHHHHHHHHhcc----------c---------hhhH--HHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchh
Q 011514 86 LP-LTLSIIPLAILAYRR----------S---------ISFF--YAYYALRTLTAMVCEGSINCLALAYVADNISERQRA 143 (484)
Q Consensus 86 ~~-~~~~~i~~~~~~~~~----------~---------~~~~--~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~ 143 (484)
+- ..+.++..+..+... + .+.. ..+...-++.-+.+ +....+...+.-.+..+++++
T Consensus 75 iP~Q~l~g~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~-ATQDIAVDGWALT~Ls~~n~~ 153 (544)
T PF13000_consen 75 IPIQYLSGILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLC-ATQDIAVDGWALTMLSPENVG 153 (544)
T ss_pred hHHHHHHHHHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHH-ccCCceeehhhhhhcChhhcc
Confidence 43 344444444333222 0 0000 11122222222222 333446677777777788888
Q ss_pred HHHHHHHHHHHhHHhHHHHhhHhhh-------h-------------HHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCC
Q 011514 144 SAFGILLGVLSASFVCGTLAARFLS-------T-------------TSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDL 203 (484)
Q Consensus 144 ~~~~~~~~~~~~g~~ig~~l~~~l~-------~-------------~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~ 203 (484)
.+..-...+.++|..++-.+--.+. | ..-..+.+.+.++..+++.++.+|.+..+..+ +
T Consensus 154 ~ASTcqtvG~~~Gyfls~tvFlalns~~f~Nky~r~~p~~~glvtl~~yl~fwg~~~l~~T~~v~~~k~E~~~~~~~~-~ 232 (544)
T PF13000_consen 154 YASTCQTVGQTAGYFLSFTVFLALNSPDFCNKYLRSTPSDEGLVTLSGYLKFWGWVFLIVTILVAFFKKEKPHSESLP-K 232 (544)
T ss_pred hHHHHHHhHhhhhHHHHHHHHHhhCCHHHHHHhcccCCCCCCeeeHHHHHHHHHHHHHHHHHHHheEeecccccccCc-c
Confidence 7777666666666665543221110 0 11122344444455555556566655332211 1
Q ss_pred CCCcccccccccCCCCCCCCccCcccCCCCchHHHHHH---hhccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcC
Q 011514 204 TRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICL---LRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFN 280 (484)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 280 (484)
.+.....+.+.+....+.++.+....++..+.++..+. +.+-|.+..+.+.....-+++.........=+.|. |++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Y~~l~~ilkLp~V~~li~ilL~~KigF~a~da~T~LKLlEk-G~~ 311 (544)
T PF13000_consen 233 IEPINKSDGKSKEISIEYDESDVISTEEILSIKDVYKSLWKILKLPNVQTLIIILLTAKIGFQANDAVTSLKLLEK-GLS 311 (544)
T ss_pred ccccccccccccccceecccccccchhhhhhHHHHHHHHHHHHcCchHHHHHHHHHHHHhccccchhhhHHHHHHc-CCC
Confidence 11000000000000001111110111112233333332 34568888888888888888888787777777776 999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcch---------------------------HHHHHhHHHHHHHHHHHhhc
Q 011514 281 KNQFADLMLIAGLAGTISQLLFMPLLAPILGEA---------------------------KLLSLGLFAACINMFICSIS 333 (484)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~---------------------------~~~~~~~~~~~~~~~~~~~~ 333 (484)
.++.+....+..=..++.. ...++++.--.+. +....+...-.+..++..
T Consensus 312 KE~LAl~~li~~P~qii~~-~~~~Kws~g~~P~~~~~~~l~~~~~~~~~~~~l~g~~g~L~~Wl~af~gRL~~a~l~~-- 388 (544)
T PF13000_consen 312 KEDLALLVLIDFPFQIILP-YYIGKWSAGSPPLDVDNKALPNFSRANKIIRLLVGDAGALRPWLWAFWGRLVAALLAQ-- 388 (544)
T ss_pred HHHhHHHHHHhhhHHHHHH-HHhhhhhcCCCccccccccccccccccchhhhhhccchhhHHHHHHHHHHHHHHHHHH--
Confidence 9997766544433344444 3333333211110 111111111001000000
Q ss_pred cchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHH
Q 011514 334 WSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQG 413 (484)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g 413 (484)
.++..|-.++..+.+... .++..-.+..+.....+....++-++..+|..=|+.+.
T Consensus 389 ---------------~iV~~fP~~g~v~~~Yf~---------lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMT 444 (544)
T PF13000_consen 389 ---------------LIVYFFPSDGPVPTYYFL---------LVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMT 444 (544)
T ss_pred ---------------heEEeCCCCCCcchHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHH
Confidence 000111001111111110 01222334455566677788889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh
Q 011514 414 CISGISSFANIVSPLIFSPLTALF 437 (484)
Q Consensus 414 ~~~~~~~lg~~~gp~i~g~l~~~~ 437 (484)
+.|++.++|+-.-..+.=++.|.+
T Consensus 445 LLNTvSNLGGtWP~~~vL~lVD~f 468 (544)
T PF13000_consen 445 LLNTVSNLGGTWPRTFVLWLVDYF 468 (544)
T ss_pred HHHHHHhcCCCchHHHHHHHhhhc
Confidence 999999999988777776777754
No 237
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.68 E-value=1.6e-06 Score=82.11 Aligned_cols=157 Identities=11% Similarity=0.016 Sum_probs=109.8
Q ss_pred HHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHH
Q 011514 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPL 88 (484)
Q Consensus 9 ~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~ 88 (484)
..+...+..|+...........++.|.++. ...+.+..+.++..+.+..+..++....+++.||+|+||.+..+.
T Consensus 141 ~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~-----~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~ 215 (310)
T TIGR01272 141 HLVLGALGIFVYVGAEVSAGSFLVNFLSDP-----HALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNA 215 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----ccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 344444455554445666666777777643 123455667789999999999999999999999999999998888
Q ss_pred HHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHhh-
Q 011514 89 TLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL- 167 (484)
Q Consensus 89 ~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l- 167 (484)
.+..++.++....++ ... ...-++.|++. +...|...+...+..|+ +.+++.++. ....+|..++|.+.|.+
T Consensus 216 ~l~~~~~~l~~~~~~---~~~-~~~~~l~g~~~-s~i~P~~~s~a~~~~~~-~~~~asai~-~~~~~Gg~i~P~l~G~la 288 (310)
T TIGR01272 216 FLAVLLSIGAALTHG---YVA-MWFVLALGLFN-SIMFPTIFSLALNALGR-HTSQGSGIL-CLAIVGGAIVPLLQGSLA 288 (310)
T ss_pred HHHHHHHHHHHHcCC---HHH-HHHHHHHHHHH-HHHHHHHHHHHHhhhhh-hhhhhHHHH-HHHHhcchHHHHHHHHHH
Confidence 888888776666655 222 23444677655 67778888888888774 345566665 56678889999877764
Q ss_pred ---hhHHHHHHHH
Q 011514 168 ---STTSAFQAAT 177 (484)
Q Consensus 168 ---~~~~~f~~~~ 177 (484)
+.+.+|++..
T Consensus 289 d~~g~~~a~~v~~ 301 (310)
T TIGR01272 289 DCLGIQLAFALPV 301 (310)
T ss_pred HhccchHHHHHHH
Confidence 4466665433
No 238
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=98.66 E-value=6.7e-06 Score=76.28 Aligned_cols=361 Identities=12% Similarity=0.006 Sum_probs=194.4
Q ss_pred hhHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhccc-----ccCch
Q 011514 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSD-----QYGRK 81 (484)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~D-----r~Grk 81 (484)
++++..+.+...+.++-.++.. .+|.+.+.. +.|-+..+. .+..+.. .-.-+.|.++.| |+|||
T Consensus 30 ~~~illLl~LYllQGiP~GL~~-~iP~lL~ak--------~vSyt~~a~-fS~ay~P-~sLKllWaPiVDs~y~k~~Grr 98 (510)
T KOG3574|consen 30 RSSILLLLFLYLLQGIPLGLIG-AIPLLLQAK--------GVSYTSQAI-FSFAYWP-FSLKLLWAPIVDSVYSKRFGRR 98 (510)
T ss_pred hhhHHHHHHHHHHcCCchhHhh-hhHHHhcCC--------Ccchhhhhh-hhhhhhH-HHHHHHHHhhhHHHHHHhhccc
Confidence 5667777777788888888888 889888643 222222232 2222222 223567999999 99999
Q ss_pred hHhHH-HHHHHHHHHHHHHhccch--------hhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHH
Q 011514 82 AMLTL-PLTLSIIPLAILAYRRSI--------SFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGV 152 (484)
Q Consensus 82 ~~l~~-~~~~~~i~~~~~~~~~~~--------~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~ 152 (484)
|..+. +..+.+..+.+.+.-.+. +....+...-++.-+.+ +....+...+.-.+.++++.|.+......+
T Consensus 99 ksWvvp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnfla-AtQDIAVDgwALtmLs~e~lgyaST~q~Vg 177 (510)
T KOG3574|consen 99 KSWVVPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLA-ATQDIAVDGWALTMLSRENLGYASTCQSVG 177 (510)
T ss_pred cceeeehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHH-hhhhhhhhHHHHHhcCHhhcCchhHHHHHH
Confidence 87653 333333333333332110 11222222333444322 455567888888888889988888777777
Q ss_pred HHhHHhHHHHhhHhh-----------hh---------HHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccc
Q 011514 153 LSASFVCGTLAARFL-----------ST---------TSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEET 212 (484)
Q Consensus 153 ~~~g~~ig~~l~~~l-----------~~---------~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~ 212 (484)
.+.|..+|..+--.+ +| ..-.++.+.+..++-.+..+.-+|.+....++
T Consensus 178 ~~~GyfL~~~ifLaL~s~dF~N~y~rs~P~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~~~~~~e----------- 246 (510)
T KOG3574|consen 178 QTAGYFLGNVVFLALESPDFCNTYLRSIPLDQGFITLAGYLWFWGALFIVATTLVALLKKENDESVDEE----------- 246 (510)
T ss_pred HhhhHHhhcceeeEecChhhhhHHHhcCcCccceEEhhHHHHHHHHHHHHHHHHHHHhcCCCchhhhhh-----------
Confidence 777766664321110 11 11233444455555555544333332221111
Q ss_pred cccCCCCCCCCccCcccCCCCchHHHHHHhhccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHH
Q 011514 213 EGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAG 292 (484)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 292 (484)
.+.......+.++...+-|.+..........-.++.+.....+.-+.|. |.+.++.+.......
T Consensus 247 ---------------~~~~i~~~yk~l~~vLklk~v~~la~i~lt~K~gf~a~da~t~LkLle~-Gv~ke~Lal~~v~~~ 310 (510)
T KOG3574|consen 247 ---------------LELGIHESYKLLRDVLKLKSVRWLAGILLTGKLGFQAADALTSLKLLEH-GVPKEELALIAVPLV 310 (510)
T ss_pred ---------------hhcCHHHHHHHHHHHHcCccHHHHHHHHHHHHHHhhhhhhccchHHHHc-CCChhHheeeeeehh
Confidence 0111111222233345567777777777777888888888888878776 999988776653333
Q ss_pred HHHHHHHHHHHHHhhhhhc------chHHHHHhHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhh--hhhHHH
Q 011514 293 LAGTISQLLFMPLLAPILG------EAKLLSLGLFAACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRK--QISVHV 364 (484)
Q Consensus 293 ~~~~~~~~~~~~~l~~~~g------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~--~~~~~~ 364 (484)
-..++..... |+++.... |+....+........+.. ..+.... +++ +....+
T Consensus 311 plqI~l~~~~-gk~ta~~~pl~~~lka~~~R~~~~~~~t~Lv~--~~~~~~~-----------------~~G~~~~~~~i 370 (510)
T KOG3574|consen 311 PLQIALPLYI-GKWTAGPRPLNVFLKAVPYRLGGGLVQTALVW--WTPTLGH-----------------SDGTFPRGYYI 370 (510)
T ss_pred hHHHhhhhhh-eeecCCCCcchHHHHhhhHHHHHHHHHHHHHh--hhccccc-----------------CCCceeechHH
Confidence 3333333222 33332111 111222222222221111 1111000 000 000100
Q ss_pred HHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 011514 365 LLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 437 (484)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~ 437 (484)
+ .+..-.+.+......+....+.-++..||...|+.+.+.|+..++|+-.=..+..++.|..
T Consensus 371 l-----------~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~l 432 (510)
T KOG3574|consen 371 L-----------LITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADGL 432 (510)
T ss_pred H-----------HHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcccC
Confidence 0 0111223344444556667788889999999999999999999999988888888888865
No 239
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.65 E-value=7.3e-07 Score=89.94 Aligned_cols=152 Identities=15% Similarity=0.155 Sum_probs=107.4
Q ss_pred HHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhh----hhcc-hHHHHHhHHHHHHHH
Q 011514 253 VVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAP----ILGE-AKLLSLGLFAACINM 327 (484)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~g~-~~~~~~~~~~~~~~~ 327 (484)
+..+..++.......+++.|+.+.+|.++..+|.++.+.-+...+.. ++.|+++| |+|| |+.+..+....++++
T Consensus 13 ~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~d-p~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~ 91 (473)
T PRK10429 13 FGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAIND-PIMGWIVNNTRSRWGKFKPWILIGTLANSVVL 91 (473)
T ss_pred cchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhh-chheeehhcCCCCCCCcchhHhhhhHHHHHHH
Confidence 34444555666777889999999999999999999999999999999 55599999 4587 556666777777776
Q ss_pred HHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhccc-CCC
Q 011514 328 FICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQV-GPN 406 (484)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-p~~ 406 (484)
.++...++... ....+| +.+...+...+.........++..|.. +++
T Consensus 92 ~llf~~p~~~~-------------------~~~~~~-------------~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~ 139 (473)
T PRK10429 92 FLLFSAHLFEG-------------------TAQYVF-------------VCVTYILWGMTYTIMDIPFWSLVPTLTLDKR 139 (473)
T ss_pred HHHHcCCCCCc-------------------cHHHHH-------------HHHHHHHHHHHHHHHcchHHhhhHHhCCCHH
Confidence 55543321111 000000 122333556777777888888999988 578
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 011514 407 EQGKAQGCISGISSFANIVSPLIFSPLTALF 437 (484)
Q Consensus 407 ~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~ 437 (484)
+|.+..+......++++.+.+.+...+.+..
T Consensus 140 eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~ 170 (473)
T PRK10429 140 EREQLVPYPRFFASLAGFVTAGFTLPFVNYV 170 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999888888888777776666555443
No 240
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.63 E-value=2.1e-06 Score=87.48 Aligned_cols=112 Identities=16% Similarity=0.061 Sum_probs=96.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhH
Q 011514 283 QFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISV 362 (484)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~ 362 (484)
+.+++.+...+++.+++ +..++++|++|||+.+..+.+...++.++.+++.+.+. +
T Consensus 90 ~~s~~~s~~~lga~~g~-l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~----------l------------- 145 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGS-LLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQ----------L------------- 145 (513)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHH----------H-------------
Confidence 44899999999999999 77799999999999999999999999999999988777 3
Q ss_pred HHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011514 363 HVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLT 434 (484)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~ 434 (484)
...=++.|++.+........+.+|..|++.||...+..+....+|..++ .+.+...
T Consensus 146 ---------------~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~ 201 (513)
T KOG0254|consen 146 ---------------IVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLG-YCINYGT 201 (513)
T ss_pred ---------------HHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhh
Confidence 3344488999999989999999999999999999999999999888877 4444443
No 241
>PRK09669 putative symporter YagG; Provisional
Probab=98.63 E-value=5.2e-07 Score=90.32 Aligned_cols=149 Identities=11% Similarity=0.107 Sum_probs=102.8
Q ss_pred HHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhh----hcch-HHHHHhHHHHHHHHHHH
Q 011514 256 FFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPI----LGEA-KLLSLGLFAACINMFIC 330 (484)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~g~~-~~~~~~~~~~~~~~~~~ 330 (484)
+..+........+++.|+.+.+|.++..+|.++.+.-+...+.. ++.|+++|| +||| +.+..+....++...+.
T Consensus 19 ~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~d-p~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~ 97 (444)
T PRK09669 19 TACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTD-PLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLT 97 (444)
T ss_pred hhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHccc-ceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHH
Confidence 33444455567788999999999999999999999999999999 556999998 5664 45556666666665544
Q ss_pred hhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhccc-CCCchh
Q 011514 331 SISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQV-GPNEQG 409 (484)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-p~~~~g 409 (484)
...++.+. ....+| ......+.+.+.........++..|.. ++++|+
T Consensus 98 f~~p~~~~-------------------~~~~~~-------------~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~ 145 (444)
T PRK09669 98 FYTPDFGA-------------------TGKIIY-------------ACVTYILLSLVYTAINVPYCAMPGAITNDPRERH 145 (444)
T ss_pred HhCCCCCc-------------------chHHHH-------------HHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHH
Confidence 44432111 000000 122223445555566666778888877 457899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 011514 410 KAQGCISGISSFANIVSPLIFSPLTALF 437 (484)
Q Consensus 410 ~~~g~~~~~~~lg~~~gp~i~g~l~~~~ 437 (484)
+..+.......+|..+++.+...+....
T Consensus 146 ~l~~~r~~~~~~G~~i~~~~~~pl~~~~ 173 (444)
T PRK09669 146 SLQSWRFALSFIGGLIVSVIALPLVDIL 173 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999988888777666654
No 242
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.56 E-value=7.8e-07 Score=86.17 Aligned_cols=163 Identities=17% Similarity=0.228 Sum_probs=132.2
Q ss_pred HHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHHHH
Q 011514 13 LFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSI 92 (484)
Q Consensus 13 l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~ 92 (484)
+++...+.+.+.+.+...+-.+++|. + -.....|........+-++.-++.+++.+|+|+-+++..++....
T Consensus 376 ff~~av~mG~g~~lv~tFLfWHled~---~-----~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~ 447 (618)
T KOG3762|consen 376 FFFVAVVMGAGVGLVFTFLFWHLEDL---G-----GIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNV 447 (618)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhc---C-----CcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHH
Confidence 45555667777788888887777765 3 223345777777888888888999999999999999999999999
Q ss_pred HHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHH-HhHHhHHHHhhHh----h
Q 011514 93 IPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVL-SASFVCGTLAARF----L 167 (484)
Q Consensus 93 i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~-~~g~~ig~~l~~~----l 167 (484)
+=.+..+..+| .|+.+-..+++|+.- +..+.+..+|+++..||+-|..+.++.+... ++|--+|.++||. +
T Consensus 448 ~Rf~~~S~L~n---~W~vLPieilqgit~-aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~f 523 (618)
T KOG3762|consen 448 GRFLYYSYLQN---PWMVLPIEILQGITH-ALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERF 523 (618)
T ss_pred HHHHHHHHhcC---chheeeHHHHHHHHH-HHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheee
Confidence 99999999999 899999999999865 7777899999999999999999999987554 7777777777776 4
Q ss_pred hhHHHHHHHHHHHHHHHHHH
Q 011514 168 STTSAFQAATIVSMLAAAYM 187 (484)
Q Consensus 168 ~~~~~f~~~~~~~~i~~~~~ 187 (484)
+-|..|.+.++.+++.+++.
T Consensus 524 g~~ttf~~~giAcl~~l~~~ 543 (618)
T KOG3762|consen 524 GARTTFRIFGIACLVTLALF 543 (618)
T ss_pred hhHHHHHHHHHHHHHHHHHH
Confidence 66888888776666554443
No 243
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.56 E-value=3.2e-06 Score=76.09 Aligned_cols=116 Identities=18% Similarity=0.133 Sum_probs=86.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHHHHHHHHHHHhccch----hhHHHHHHHHHHhhhhcc
Q 011514 47 SLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSI----SFFYAYYALRTLTAMVCE 122 (484)
Q Consensus 47 ~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~i~~~~~~~~~~~----~~~~~l~~~r~l~G~~~~ 122 (484)
+.+..+...+.+...+|..+ +++.|.+.||+|++.++.+|.+...+|..+...+-+. ..+|.+.+..++.|. +.
T Consensus 33 ~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~-s~ 110 (250)
T PF06813_consen 33 GYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMCLFLFLGGN-SS 110 (250)
T ss_pred CCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHHHHHHHHcc-cH
Confidence 44445667888888888876 5889999999999999999999999998887764221 135677766777664 33
Q ss_pred chhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhH
Q 011514 123 GSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAAR 165 (484)
Q Consensus 123 g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~ 165 (484)
+....++.....+.+| ++||.+.|+.-...+++..+-..+..
T Consensus 111 ~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~ 152 (250)
T PF06813_consen 111 CWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYS 152 (250)
T ss_pred HHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHH
Confidence 4444555566667787 68999999999999998766554443
No 244
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.51 E-value=4.9e-06 Score=83.62 Aligned_cols=175 Identities=13% Similarity=0.121 Sum_probs=115.3
Q ss_pred hHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhc-----chHHHHHhHHH
Q 011514 248 LSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILG-----EAKLLSLGLFA 322 (484)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g-----~~~~~~~~~~~ 322 (484)
+......++..... .......+.++++.+|.+..+.+.+.+...+...+-. + .+.++||++ ||+.+.++.++
T Consensus 28 ~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~-l-~g~l~D~~~i~G~rRr~~l~~~~~l 104 (468)
T TIGR00788 28 LAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKP-F-AGVMSDTFPLFGYTKRWYLVLSGLL 104 (468)
T ss_pred HHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-H-HHHHHHhcCCCCccchHHHHHHHHH
Confidence 33444456666666 6666678888888889999999899898888888865 5 499999996 66666666655
Q ss_pred H-HHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhc
Q 011514 323 A-CINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSK 401 (484)
Q Consensus 323 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 401 (484)
. .+.+..++..++... . ......+.+++.+.......++..|
T Consensus 105 ~~~~~~~~l~~~~~~~~----------~---------------------------~~~~~~l~~~~~a~~dv~~da~~~e 147 (468)
T TIGR00788 105 GSAILYGLLPGKVSSAK----------V---------------------------AAAFIFLAALAKALYDVLVDSLYSE 147 (468)
T ss_pred HHHHHHHhcccccchHH----------H---------------------------HHHHHHHHHHHHHHHHHhHHHHHhh
Confidence 5 233333332222111 0 1224446777777788888999999
Q ss_pred ccCCCchhH---HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHHHHHHhccC
Q 011514 402 QVGPNEQGK---AQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSHT 471 (484)
Q Consensus 402 ~~p~~~~g~---~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (484)
..+ ++++. ..+......++|..+++.++|.+.+.. +.+. .|.+.+++.++......+.+|+
T Consensus 148 ~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~-~~~~-------~f~~~a~l~ll~~~~~~~~~E~ 211 (468)
T TIGR00788 148 RIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKT-LTRI-------LFLITAALLLLQLFVSNLSKER 211 (468)
T ss_pred hhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhc-Ccch-------HHHHHHHHHHHHHHHHHhcccc
Confidence 988 54444 344444555689999999999999875 5444 4455555555544444455554
No 245
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.49 E-value=1.5e-06 Score=76.56 Aligned_cols=327 Identities=11% Similarity=0.020 Sum_probs=161.8
Q ss_pred HHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHHHHHHHH
Q 011514 17 VFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLA 96 (484)
Q Consensus 17 ~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~i~~~ 96 (484)
.++...+..+..|.+-.+.+.+ ..+.. + +|.+.-...-..++.+.+.|.++|+-|||+.-+.-++.+.++++
T Consensus 46 yslmmAgDWLQgPYvYyLYstY-gFgkG--~-----IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCi 117 (454)
T KOG4332|consen 46 YSLMMAGDWLQGPYVYYLYSTY-GFGKG--D-----IGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCI 117 (454)
T ss_pred HHHHHhhhhhcCceeeeeehhc-CccCC--c-----cceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHH
Confidence 3444555566666654444333 11222 2 23333333445566677789999999999976655555555443
Q ss_pred HHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHH-HhhcCCccchhHHHHHHHHHHHhH--------HhHHHHhhHh-
Q 011514 97 ILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY-VADNISERQRASAFGILLGVLSAS--------FVCGTLAARF- 166 (484)
Q Consensus 97 ~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~-i~~~~~~~~r~~~~~~~~~~~~~g--------~~ig~~l~~~- 166 (484)
.-.+++ +-.++++|.+-|+.. .....+..++ +.|.. |+|+.-.-+....++=+ .+++.+.+..
T Consensus 118 -TKhSpq---YkVLmVGR~LGGiaT-sLLFSaFEsWliaEHn--ekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~l 190 (454)
T KOG4332|consen 118 -TKHSPQ---YKVLMVGRVLGGIAT-SLLFSAFESWLIAEHN--EKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLL 190 (454)
T ss_pred -hhcCCc---eEEEeehhhhhhHHH-HHHHHHHHHHHHHHhh--hccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHH
Confidence 334555 678899999999865 4444455554 55654 34544443433333222 2222222222
Q ss_pred -----hhhHHHHHHHHHHHHHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHHHHHH
Q 011514 167 -----LSTTSAFQAATIVSMLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICL 241 (484)
Q Consensus 167 -----l~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (484)
+|--.||-.++.+..+...++..--.|.-.++.++ +.-....+...+.
T Consensus 191 vd~~slGPVAPFdAAacfLaigmAvil~~W~ENygdps~~---------------------------kdlltqf~gaa~a 243 (454)
T KOG4332|consen 191 VDTFSLGPVAPFDAAACFLAIGMAVILSSWSENYGDPSEN---------------------------KDLLTQFKGAARA 243 (454)
T ss_pred HHHhccCCCCchHHHHHHHHHHHHHHHhhhhhccCChhhh---------------------------HHHHHHhhHhHHH
Confidence 23355666555444444333332222221111111 0001122333333
Q ss_pred hhccchhHHHHHHHHHHhchhhh-hHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhh-hcchHHHHHh
Q 011514 242 LRSSVTLSQAAVVAFFSGLSEGG-MQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPI-LGEAKLLSLG 319 (484)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~g~~~~~~~~ 319 (484)
+..++++..+-....++-...+. ..-|.|..-.+.-+ .--|.+++.+.+..++++.+....++++ ......+.+.
T Consensus 244 iaSD~ki~LLG~iqsLFE~smytFVFLWTPaLspn~e~---iPhGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqiv 320 (454)
T KOG4332|consen 244 IASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEE---IPHGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIV 320 (454)
T ss_pred HhcchHHHHHHHHHHHHhhhhheeeeeecccCCCCccc---CCchhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHH
Confidence 44455544333333332222222 11122221111111 1137888888888999986654444332 2223455555
Q ss_pred HHHHHHHHHHHhhccchhh-HHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHH
Q 011514 320 LFAACINMFICSISWSAWV-IKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSI 398 (484)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 398 (484)
+.+..+.+.+...+..... +..+.. -.+..+++-.+.+...|...-+
T Consensus 321 f~vs~a~l~Lpilt~~vsP~kes~~~--------------------------------s~i~F~~~E~cvGlfwPSimkm 368 (454)
T KOG4332|consen 321 FLVSIAALLLPILTSSVSPSKESPSE--------------------------------SLIGFCLFEACVGLFWPSIMKM 368 (454)
T ss_pred HHHHHHHHHHHHHHhccCCCcCCchH--------------------------------HHHHHHHHHHHHhhcchHHHHH
Confidence 5555554444333221110 000000 1334446667788889999999
Q ss_pred HhcccCCCchhHHHHHHHHHHH
Q 011514 399 VSKQVGPNEQGKAQGCISGISS 420 (484)
Q Consensus 399 ~~~~~p~~~~g~~~g~~~~~~~ 420 (484)
-++..|++.|++.+-.+..--+
T Consensus 369 RsqyIPEearstimNfFRvPLn 390 (454)
T KOG4332|consen 369 RSQYIPEEARSTIMNFFRVPLN 390 (454)
T ss_pred HHhhCCHHHHhhhhhheechhh
Confidence 9999999999877665544333
No 246
>PRK11462 putative transporter; Provisional
Probab=98.47 E-value=6.1e-06 Score=82.79 Aligned_cols=151 Identities=15% Similarity=0.163 Sum_probs=108.3
Q ss_pred HHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhh----hcchH-HHHHhHHHHHHHHH
Q 011514 254 VAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPI----LGEAK-LLSLGLFAACINMF 328 (484)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~g~~~-~~~~~~~~~~~~~~ 328 (484)
..+..+........++..|..+..|.++..+|.++.+.-+...+.- ++.|+++|| +|||| .+.++.+..++.+.
T Consensus 17 g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~D-p~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~ 95 (460)
T PRK11462 17 GDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISD-PCMGLLADRTRSRWGKFRPWVLFGALPFGIVCV 95 (460)
T ss_pred chhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHh-hhheehhccCCCCCCCcchhHhHHHHHHHHHHH
Confidence 3344455556667788999999999999999999999999999999 555999996 56654 55667666776666
Q ss_pred HHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccC-CCc
Q 011514 329 ICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVG-PNE 407 (484)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p-~~~ 407 (484)
++...++... ....+| +.....++..+.........++..|..+ +++
T Consensus 96 llf~~p~~s~-------------------~~~~~y-------------~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~e 143 (460)
T PRK11462 96 LAYSTPDLSM-------------------NGKMIY-------------AAITYTLLTLLYTVVNIPYCALGGVITNDPTQ 143 (460)
T ss_pred HHHhCCCCCc-------------------chHHHH-------------HHHHHHHHHHHHHHHhccHHHHHHHhcCCHHH
Confidence 5544432111 000011 1233335567777777788888888876 678
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 011514 408 QGKAQGCISGISSFANIVSPLIFSPLTALF 437 (484)
Q Consensus 408 ~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~ 437 (484)
|++..+.......+|..+++.+...+.+..
T Consensus 144 Rt~l~s~r~~~~~iG~~~~~~~~~plv~~~ 173 (460)
T PRK11462 144 RISLQSWRFVLATAGGMLSTVLMMPLVNLI 173 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999988888877777665
No 247
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.46 E-value=7.2e-07 Score=82.32 Aligned_cols=126 Identities=18% Similarity=0.209 Sum_probs=95.9
Q ss_pred HHHHHHHHhhhhhcccccCchhHhHHHHHHHHHHHHHHHhccchhh-HHHHHHHHHHhhhhccchhhHhhhHHHhhcCCc
Q 011514 61 GLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISF-FYAYYALRTLTAMVCEGSINCLALAYVADNISE 139 (484)
Q Consensus 61 ~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~i~~~~~~~~~~~~~-~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~ 139 (484)
.+....+.++.+.+.||+|||+.+..+.+++++..++.....+-.. ..+++.+|++.. +.+ .+.+.|..|++|.
T Consensus 391 slaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafis----g~f-qvaYvYtPEVyPT 465 (528)
T KOG0253|consen 391 SLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFIS----GAF-QVAYVYTPEVYPT 465 (528)
T ss_pred HHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHh----chh-eEEEEecCcccch
Confidence 4455667778999999999999999999999999887766544211 245566776644 344 3789999999999
Q ss_pred cchhHHHHHHHHHHHhHHhHHHHhhHhh--hhHHHHHHHHHHHHHHHHHHHHHcc
Q 011514 140 RQRASAFGILLGVLSASFVCGTLAARFL--STTSAFQAATIVSMLAAAYMRVFLK 192 (484)
Q Consensus 140 ~~r~~~~~~~~~~~~~g~~ig~~l~~~l--~~~~~f~~~~~~~~i~~~~~~~~lp 192 (484)
.-|+...|.-+....+|.++.|+++-.. .-..+..+.+.+.++..+...+ +|
T Consensus 466 avRatgvGtcSsmaRIggI~~p~iA~~~e~s~sl~i~vy~~~~ilagIavcf-fP 519 (528)
T KOG0253|consen 466 AVRATGVGTCSSMARIGGIFSPVIAMRAELSTSLPIFVYGALFILAGIAVCF-FP 519 (528)
T ss_pred hhhhcchhhhhhHHhhhhhhhhHHHHHhccceeehHHHHHHHHHHHHHHhee-ee
Confidence 9999999999999999999999998433 3345566666666666666655 55
No 248
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.45 E-value=1.5e-05 Score=73.93 Aligned_cols=167 Identities=17% Similarity=0.120 Sum_probs=122.9
Q ss_pred HHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhccccc-CchhHhHHHH
Q 011514 10 LSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQY-GRKAMLTLPL 88 (484)
Q Consensus 10 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-Grk~~l~~~~ 88 (484)
-|.+.+..-+.....+....-+|.+..|. +.|..+.|++.+...+.++..++....+++|. ++|+......
T Consensus 210 aW~vtLfmGlqS~~~Y~~~~WLP~ili~~--------G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~ 281 (395)
T COG2807 210 AWQVTLFMGLQSLLYYIVIGWLPAILIDR--------GLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLAL 281 (395)
T ss_pred hHHHHHHHHhhHHHHHHHHHHHHHHHHHc--------CCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHH
Confidence 34444445566667777788899999887 66677889999999999999999999999965 6788888888
Q ss_pred HHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCc-cchhHHHHHHHHHHHhHHhHHHHhhHhh
Q 011514 89 TLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISE-RQRASAFGILLGVLSASFVCGTLAARFL 167 (484)
Q Consensus 89 ~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~g~~ig~~l~~~l 167 (484)
..+.++...+.+.+....+++ -++.|++. |..+|.+...+.+.+++ ++-++..+..|....+=..+||.+.|++
T Consensus 282 ~~~l~G~~G~~~~P~~~~~lw----~~llG~G~-G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~l 356 (395)
T COG2807 282 LLMLVGLVGLLLAPGQLPILW----ALLLGLGQ-GGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFL 356 (395)
T ss_pred HHHHHHHHHHHHhhhhHHHHH----HHHHhCcc-chHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHH
Confidence 888888888888777332222 48889765 66668999999988864 4444555555555555566789888886
Q ss_pred -----hhHHHHHHHHHHHHHHHHHHHH
Q 011514 168 -----STTSAFQAATIVSMLAAAYMRV 189 (484)
Q Consensus 168 -----~~~~~f~~~~~~~~i~~~~~~~ 189 (484)
+|+.+........++..+..+.
T Consensus 357 hDa~gsw~~~~~~l~~~~i~m~i~Gl~ 383 (395)
T COG2807 357 HDATGSWSAPLVLLALATLLMLIFGLR 383 (395)
T ss_pred HHhcCChHHHHHHHHHHHHHHHHHHhh
Confidence 6888887777666655555544
No 249
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.44 E-value=1.7e-06 Score=88.53 Aligned_cols=121 Identities=16% Similarity=0.126 Sum_probs=105.8
Q ss_pred hhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHh
Q 011514 275 AQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVIKIFFNKVFKLLLLSF 354 (484)
Q Consensus 275 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 354 (484)
+.++.+........++..++..++. ++.|.++||+|||+++..+..+..++-+..++.++.+. ++..||
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~-~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~----------~~~~Rf 179 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGS-LIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWM----------FLIFRF 179 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHH-hhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHH----------HHHHHH
Confidence 3445666677777888888888888 77799999999999999999999999999999999888 666666
Q ss_pred hhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011514 355 ITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLT 434 (484)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~ 434 (484)
+.|++.+........+..|.+++++|+.+..+ ......++.++|...+++.
T Consensus 180 ----------------------------l~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~ 230 (521)
T KOG0255|consen 180 ----------------------------LSGFFGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYIT 230 (521)
T ss_pred ----------------------------HHHhhccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999 8888888889999988888
Q ss_pred H
Q 011514 435 A 435 (484)
Q Consensus 435 ~ 435 (484)
.
T Consensus 231 ~ 231 (521)
T KOG0255|consen 231 R 231 (521)
T ss_pred h
Confidence 7
No 250
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.42 E-value=6.8e-06 Score=81.83 Aligned_cols=155 Identities=20% Similarity=0.168 Sum_probs=112.8
Q ss_pred hhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHh
Q 011514 275 AQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVIKIFFNKVFKLLLLSF 354 (484)
Q Consensus 275 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 354 (484)
+..+....+.+...+++.++.+++. +.++.+.||++..+.+....++..+..++....++.+. ++++|+
T Consensus 74 edl~~~~~~l~~~~t~F~v~Yii~~-~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~----------~ialr~ 142 (495)
T KOG2533|consen 74 EDLKLVGNQLGVLDTVFYVGYIIGQ-FPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPG----------LIALRF 142 (495)
T ss_pred cccchhhhhhhhHHHHHHHHHHHHH-hhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHH----------HHHHHH
Confidence 5557888889999999999999999 67799999999666665555554444434434445554 555555
Q ss_pred hhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011514 355 ITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLT 434 (484)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~ 434 (484)
+.|+..+...|....+++..+.+++||+.+|+.+...++|+++|+.+...++
T Consensus 143 ----------------------------llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~ 194 (495)
T KOG2533|consen 143 ----------------------------LLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVF 194 (495)
T ss_pred ----------------------------HHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhh
Confidence 8999999999999999999999999999999999999999999999999876
Q ss_pred HhhhcCCCCcccCchHHHHHHHHHHHHHHHHH-Hhcc
Q 011514 435 ALFLSKGAPFNFPGFSIMCIGLASMVAFIQSL-MMSH 470 (484)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 470 (484)
+.- +......| ...|++-+++.+...++.+ .+++
T Consensus 195 ~~~-~~~~~~gW-~~~FiI~G~i~~~~gi~~f~~lp~ 229 (495)
T KOG2533|consen 195 KLN-GSGGLAGW-RWLFIIEGVITLVLGIVVFFFLPD 229 (495)
T ss_pred hhc-CCCCcCCc-eeehhHHHHHHHHHHheEEEEecC
Confidence 632 11111111 1156666666555544443 3443
No 251
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.42 E-value=0.00019 Score=67.13 Aligned_cols=152 Identities=14% Similarity=0.036 Sum_probs=100.4
Q ss_pred hhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHh
Q 011514 275 AQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVIKIFFNKVFKLLLLSF 354 (484)
Q Consensus 275 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 354 (484)
+.+|++..+++.++........+.. .+.|.+.||+|||+..+...++..++++.-- .++.+.
T Consensus 62 ~~yg~~~~qIa~Lf~~Gf~Ss~i~g-~~~G~laD~~Grk~~cl~~cily~~scl~k~-~~~~~~---------------- 123 (354)
T PF05631_consen 62 ESYGFSEHQIAILFVAGFASSAIFG-TFVGSLADRYGRKKACLLFCILYSLSCLTKH-SSNYPV---------------- 123 (354)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCchHHHHHHHHHHHHHHHHHh-ccccHH----------------
Confidence 3579999999999988888888888 5559999999999998888888888876443 333333
Q ss_pred hhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHh-----cccCCCchhHHHHHHH-HHHHHHHHHHHH
Q 011514 355 ITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVS-----KQVGPNEQGKAQGCIS-GISSFANIVSPL 428 (484)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-----~~~p~~~~g~~~g~~~-~~~~lg~~~gp~ 428 (484)
++..=++-|++....+...-++.. +-.|++..+..++... ..+.+-.+.+..
T Consensus 124 ----------------------L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv 181 (354)
T PF05631_consen 124 ----------------------LLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGV 181 (354)
T ss_pred ----------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhH
Confidence 133334666766666666555443 3356666677777666 334455566666
Q ss_pred HHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHHHHHHhccCC
Q 011514 429 IFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSHTP 472 (484)
Q Consensus 429 i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (484)
++..+.+.. +..... +|..+..+.+++.+......+|+
T Consensus 182 ~a~~l~~~~-~~g~va-----PF~~a~~~l~~~~~~I~~~W~EN 219 (354)
T PF05631_consen 182 VANVLADWF-GFGPVA-----PFDAAIVLLAVAAVLILKTWPEN 219 (354)
T ss_pred HHHHHHHHh-CCCCcc-----hHHHHHHHHHHHHHHHHhccccc
Confidence 666666665 332111 56777777777766665544444
No 252
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=98.41 E-value=0.0014 Score=65.32 Aligned_cols=235 Identities=11% Similarity=0.119 Sum_probs=143.5
Q ss_pred HHHHhhhhhcccccCchhHhHHHHHHHHHHHHHHHhc--c-------ch-------------h------hHHHHHHHHHH
Q 011514 65 LVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYR--R-------SI-------------S------FFYAYYALRTL 116 (484)
Q Consensus 65 ~~~~~~~G~l~Dr~Grk~~l~~~~~~~~i~~~~~~~~--~-------~~-------------~------~~~~l~~~r~l 116 (484)
.+.......++||++|.+++-.....+.....++++. | +. . ..|...+..+.
T Consensus 73 ~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~ 152 (491)
T PF03219_consen 73 ILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVM 152 (491)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHH
Confidence 4446678999999999999887777766666666553 1 10 0 01222233333
Q ss_pred hhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHhhh-------------hHHHHH-HHHH--HH
Q 011514 117 TAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLS-------------TTSAFQ-AATI--VS 180 (484)
Q Consensus 117 ~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~-------------~~~~f~-~~~~--~~ 180 (484)
.-+.++-...-.-..+..|.++.+|-.|..++...+.++|.++++.+...+. |...+. ..++ +.
T Consensus 153 aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~v~~~ 232 (491)
T PF03219_consen 153 AELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAGVDAWELSLNSLMGIVLIL 232 (491)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccHhHHHHHHHHHHHHH
Confidence 3332212222246889999999999999999999999999998886665432 222211 1111 11
Q ss_pred HHHHHHHHHHcccCCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHHHHHHhhccchhHHHHHHHHHHhc
Q 011514 181 MLAAAYMRVFLKDDVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLICLLRSSVTLSQAAVVAFFSGL 260 (484)
Q Consensus 181 ~i~~~~~~~~lpe~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (484)
.+........+.+....+++. .+...+++.++.+.+.++.++.+.++|.+..+.+...+++.
T Consensus 233 g~~i~~~~~~~~~~vl~~~~~------------------~~~~~~~kk~k~k~s~~es~k~l~kS~yL~~Ia~lvi~Ygi 294 (491)
T PF03219_consen 233 GIVIILLYRYMNKNVLTDPRF------------------YPSAKKKKKKKPKMSLKESFKLLLKSKYLLCIALLVIAYGI 294 (491)
T ss_pred HHHHHHHHHHHHHHccCcccc------------------chhhhcccccCCCccHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 112222222333221111110 00011122234455788999999999999999998888888
Q ss_pred hhhhhHHHHHHHHhhhcCcChhh----HHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHh
Q 011514 261 SEGGMQASFLYFLKAQFHFNKNQ----FADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLG 319 (484)
Q Consensus 261 ~~~~~~~~~~~~~~~~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~ 319 (484)
.....+..+-..+++.+. |+.+ .|......++...+.. ++++.+.+|+|-+....+.
T Consensus 295 ~inLvE~~wK~~lk~~~~-~~~~ysafmG~~~~~tGivtii~~-~l~~~iir~~GW~~~Alit 355 (491)
T PF03219_consen 295 SINLVEVVWKSQLKQLYP-DPNDYSAFMGKFSSWTGIVTIIMM-FLSSNIIRRFGWRTAALIT 355 (491)
T ss_pred HHHHHHHHHHHHHHHHCC-CchHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhHHHHHHHh
Confidence 888877777777777653 4443 3445566677777777 7778999999877766554
No 253
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.38 E-value=2.1e-05 Score=70.82 Aligned_cols=163 Identities=12% Similarity=0.189 Sum_probs=104.1
Q ss_pred HHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhhccchhhHHHhhhhHH
Q 011514 268 SFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVIKIFFNKVF 347 (484)
Q Consensus 268 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (484)
.+...+++.+|+|.+|...+-....++..++ +..|.+.|+.|++.++.+|.....+++..+...-+...
T Consensus 23 ~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G--~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i--------- 91 (250)
T PF06813_consen 23 AYSPQLKSRLGYSQSQLNTLSTAGDIGSYFG--ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRI--------- 91 (250)
T ss_pred hhhHHHHHHhCCCHHHHHHHHHHHHHHhhcc--HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCcc---------
Confidence 3444577888999999888888777777653 66699999999999999999999999887765433221
Q ss_pred HHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHH
Q 011514 348 KLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSP 427 (484)
Q Consensus 348 ~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp 427 (484)
...++|. +.....+.+.+....+........+.+| ++||++.|+.-....+++.+-.
T Consensus 92 ----------~~~~~~~------------~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t 148 (250)
T PF06813_consen 92 ----------PSLPVWL------------MCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFT 148 (250)
T ss_pred ----------CccchHH------------HHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHH
Confidence 0011111 1222223344444444555555567888 6899999999999998877777
Q ss_pred HHHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHHHHHHhccCC
Q 011514 428 LIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSHTP 472 (484)
Q Consensus 428 ~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (484)
.+...+++. ....+ .++.+.....++++..++.|+.+
T Consensus 149 ~i~~~~f~~---~~~~f-----ll~la~~~~~v~l~~~~~vr~~~ 185 (250)
T PF06813_consen 149 QIYSAFFGD---DPSSF-----LLFLAVLPAVVCLVAMFFVRPVP 185 (250)
T ss_pred HHHHHHcCC---ChHHH-----HHHHHHHHHHHHHHHhhheeccC
Confidence 666655543 11222 33334334444455555555443
No 254
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.33 E-value=5.5e-06 Score=80.79 Aligned_cols=151 Identities=16% Similarity=0.165 Sum_probs=112.8
Q ss_pred hhHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHH
Q 011514 7 IKTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTL 86 (484)
Q Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~ 86 (484)
+|++..+++..++...+.++....+..|.+..+ |.++ ....+.......+.+++.+++.++++|+|+|+++.+
T Consensus 235 Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~l--g~~~-----l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~ 307 (467)
T COG2211 235 NRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVL--GDPE-----LFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLI 307 (467)
T ss_pred cchHHHHHHHHHHHHHHHHHHhhhhheeEEEEc--CChH-----HHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHH
Confidence 456666677777777788888888887776543 2222 234566777778888889999999999999999999
Q ss_pred HHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCc-------cchhHHHHHHHHHHHhHHhH
Q 011514 87 PLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISE-------RQRASAFGILLGVLSASFVC 159 (484)
Q Consensus 87 ~~~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~-------~~r~~~~~~~~~~~~~g~~i 159 (484)
+.++..++.++..+.+. +..+..++..++.+++. +...+...++++|..+- +.-|...+.+....-+|..+
T Consensus 308 ~~~~~~i~~~~~~f~~~-~~~~l~~~~~~i~~~g~-~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~al 385 (467)
T COG2211 308 GLLLLAVGYLLLYFTPA-GSVVLIVVALIIAGVGT-GIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLAL 385 (467)
T ss_pred HHHHHHHHHHHHHhhcC-cchHHHHHHHHHHHHHh-hccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHH
Confidence 99999999999988872 22677788888888655 66777889999988863 22355667777777777777
Q ss_pred HHHhhHh
Q 011514 160 GTLAARF 166 (484)
Q Consensus 160 g~~l~~~ 166 (484)
+..+.+.
T Consensus 386 a~~~~g~ 392 (467)
T COG2211 386 AGFIPGW 392 (467)
T ss_pred HHHHHHH
Confidence 7655544
No 255
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.31 E-value=5.5e-06 Score=78.97 Aligned_cols=123 Identities=15% Similarity=0.178 Sum_probs=90.6
Q ss_pred cChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhh
Q 011514 279 FNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRK 358 (484)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~ 358 (484)
+++...+.+.....++.++++ ++.|++.||+|||+++...++++.++.+..+....... +......+...||
T Consensus 81 ~ps~i~~~Vn~~A~vGti~GQ-l~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~---~~~~m~~L~~~R~---- 152 (538)
T KOG0252|consen 81 YPSGVLALVNAAALVGTIFGQ-LFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTS---PLGVMMTLCFFRF---- 152 (538)
T ss_pred CCchHHHHHHHHHHHHHHHHH-HHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCC---CcchhhHHHHHHH----
Confidence 344556778888889999999 66699999999999999999888888876655432211 0001112333444
Q ss_pred hhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 011514 359 QISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPL 433 (484)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l 433 (484)
++|+|.+.-+|...++.+|...++.||+-.+..-..+..|...|..+.-.+
T Consensus 153 ------------------------~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv 203 (538)
T KOG0252|consen 153 ------------------------LLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIV 203 (538)
T ss_pred ------------------------HhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHH
Confidence 889999999999999999999999999988877777776666555544433
No 256
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.30 E-value=3.5e-06 Score=60.85 Aligned_cols=70 Identities=21% Similarity=0.231 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHH
Q 011514 13 LFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTL 90 (484)
Q Consensus 13 l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~ 90 (484)
+-...|+...+.+...|.+|.+.++. +.+..++|.+.++..+...++.|++|.++||++|++..+.....
T Consensus 5 lk~~yf~~f~~~g~~~Pfl~~~~~~~--------Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 5 LKAFYFFYFAALGCLYPFLPLYLKQL--------GLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHHHHHHhhhhHhhhhc--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence 33455667778889999999998765 67778889999999999999999999999999998877765544
No 257
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.28 E-value=4.4e-05 Score=79.04 Aligned_cols=173 Identities=11% Similarity=0.024 Sum_probs=120.0
Q ss_pred hhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhh-hcchHHHHHhHHHHHHHHHHHhhccchhhH
Q 011514 261 SEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPI-LGEAKLLSLGLFAACINMFICSISWSAWVI 339 (484)
Q Consensus 261 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (484)
++++....+..|+.+.+|++..++..++.......-+.. ++++++.|+ +|+++.+.++.++..++..++.+.......
T Consensus 2 syYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~p-ilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~ 80 (654)
T TIGR00926 2 SYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTP-LIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSG 80 (654)
T ss_pred ceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccc
Confidence 456777788889888899999888777777777677776 777999995 799999999999988888877664321110
Q ss_pred HHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCC---chhHHHHHHH
Q 011514 340 KIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPN---EQGKAQGCIS 416 (484)
Q Consensus 340 ~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~---~~g~~~g~~~ 416 (484)
+... . ........+...|.+..-|...+...+.++++ ++-+.+.+..
T Consensus 81 -----------------~~~~-~------------~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY 130 (654)
T TIGR00926 81 -----------------HPLH-D------------LLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFY 130 (654)
T ss_pred -----------------cchH-H------------HHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHH
Confidence 0000 0 00144555778888889999999999988754 3667888889
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCC--CCcccCchHHHHHHHHHHHHHHHHHH
Q 011514 417 GISSFANIVSPLIFSPLTALFLSKG--APFNFPGFSIMCIGLASMVAFIQSLM 467 (484)
Q Consensus 417 ~~~~lg~~~gp~i~g~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (484)
...++|+.+++.+.+.+.+..+... ..| ...|.+.+++.+++.+....
T Consensus 131 ~~iNiGSlis~~i~~~l~~~~~~fg~~~~~---~~aF~i~~i~m~ia~lvf~~ 180 (654)
T TIGR00926 131 FAINAGSLISTIITPILRGDVGCFGCQDCY---PLAFGVPAILMILALIVFMA 180 (654)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcccccCcch---HHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998875432211 111 11456666666665554443
No 258
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.26 E-value=7.6e-05 Score=70.99 Aligned_cols=169 Identities=18% Similarity=0.168 Sum_probs=129.4
Q ss_pred HHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhccc-ccCchhHhHHHHH
Q 011514 11 SHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSD-QYGRKAMLTLPLT 89 (484)
Q Consensus 11 ~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~D-r~Grk~~l~~~~~ 89 (484)
...+...++..+++++.-+++-+|- .+-++.+..++.-+.+....|.+++-...|++.. |.++|+.-..++.
T Consensus 211 ~~f~~fl~l~t~a~~~QD~iLEPyg-------g~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~ 283 (403)
T PF03209_consen 211 RRFFVFLFLGTLAFFMQDVILEPYG-------GEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCL 283 (403)
T ss_pred hHHHHHHHHHHHHHHhhHHHcCCch-------hHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHH
Confidence 3445556666666666666666664 4445777778889999999999999999998887 6778888888998
Q ss_pred HHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHhh--
Q 011514 90 LSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFL-- 167 (484)
Q Consensus 90 ~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l-- 167 (484)
..+++..+..++...+..+.+...-++.|++. |.+.....+...|..++++.|..+|.+.....++.-+|..+++..
T Consensus 284 ~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~-G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D 362 (403)
T PF03209_consen 284 LGALAFALIILAGPLGSPWLFRPGVFLLGLGN-GLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRD 362 (403)
T ss_pred HHHHHHHHHHHHHhcccchHHHHHHHHHHHhh-hHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888777665543333688899999999755 888888999999999999999999999999999888888887652
Q ss_pred ------------hhHHHHHHHHHHHHHHHHHH
Q 011514 168 ------------STTSAFQAATIVSMLAAAYM 187 (484)
Q Consensus 168 ------------~~~~~f~~~~~~~~i~~~~~ 187 (484)
++..+|.+.++..+++..+.
T Consensus 363 ~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll 394 (403)
T PF03209_consen 363 LVRALFGNSPALAYGVVFALEAVLLLAALVLL 394 (403)
T ss_pred HHHHhccCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 34567777776555554444
No 259
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.19 E-value=7.2e-05 Score=73.31 Aligned_cols=153 Identities=16% Similarity=0.154 Sum_probs=107.1
Q ss_pred chhHHHHHHHHHHhchhhhhHHHHHHHHhh-hcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcc-hHHHHHhHHHH
Q 011514 246 VTLSQAAVVAFFSGLSEGGMQASFLYFLKA-QFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGE-AKLLSLGLFAA 323 (484)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~-~~~~~~~~~~~ 323 (484)
|.++...+..++.......+....-.|+++ ..+-+.+-.|+..+...++..+.+ +..+++.+|.+. |+.++.+.+++
T Consensus 34 rsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~-liF~~Ws~k~~~~k~Pli~s~ii~ 112 (488)
T KOG2325|consen 34 RSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFS-LIFGIWSNKTGSVKKPLIVSFLIA 112 (488)
T ss_pred HhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcc-hhhcccccccCCcccCHHHHHHHH
Confidence 445556666666666665554444455655 237777888999999999999999 555888988775 77788899888
Q ss_pred HHHHHHHh-hc--cchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHh
Q 011514 324 CINMFICS-IS--WSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVS 400 (484)
Q Consensus 324 ~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 400 (484)
.++.++.. +. ++.+. +.+ ++.=++.|++.+ ......++++
T Consensus 113 ~~g~llY~~l~~~~~~~~--------y~m----------------------------L~~R~l~Gvg~~-n~a~lR~Y~a 155 (488)
T KOG2325|consen 113 IIGNLLYLALAYVPNGVK--------YLM----------------------------LVARILTGVGVG-NFAVLRAYIA 155 (488)
T ss_pred HHHHHHHHHHHhcccchH--------HHH----------------------------HHHHHHcCcCcc-cHHHHHHHHH
Confidence 88888773 22 22121 112 222225555544 3456788889
Q ss_pred cccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 011514 401 KQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 436 (484)
Q Consensus 401 ~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~ 436 (484)
+..-.++|.++++..+....+|.++||.+...+...
T Consensus 156 ~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~L 191 (488)
T KOG2325|consen 156 DASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPL 191 (488)
T ss_pred hccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhh
Confidence 888889999999999998899999999887665543
No 260
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.11 E-value=9.8e-05 Score=61.37 Aligned_cols=104 Identities=16% Similarity=0.143 Sum_probs=84.0
Q ss_pred HHHHHHHHHHHHhhhhhcccccCchhHhHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhc
Q 011514 57 QAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADN 136 (484)
Q Consensus 57 ~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~ 136 (484)
.++......++.++.+.+.+++|.|+.++++.+...+-..... -++ .+.++.+-++.|++. +...++...++.+.
T Consensus 43 lai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~-~~~---~~~l~~~s~l~G~~~-a~lW~aqg~ylt~~ 117 (156)
T PF05978_consen 43 LAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFF-YPN---SYTLYPASALLGFGA-ALLWTAQGTYLTSY 117 (156)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHH-hhh---HHHHHHHHHHHhhhh-HHhhHhhhHHHHHc
Confidence 3445555666677788899999999999999998886665543 445 588899999999755 78888889999999
Q ss_pred CCccchhHHHHHHHHHHHhHHhHHHHhhH
Q 011514 137 ISERQRASAFGILLGVLSASFVCGTLAAR 165 (484)
Q Consensus 137 ~~~~~r~~~~~~~~~~~~~g~~ig~~l~~ 165 (484)
.++++|++..++.-.....+.++|.+..-
T Consensus 118 s~~~~~~~~~~ifw~i~~~s~i~G~~~~~ 146 (156)
T PF05978_consen 118 STEETIGRNTGIFWAIFQSSLIFGNLFLF 146 (156)
T ss_pred CCHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999888888888876543
No 261
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.10 E-value=2e-05 Score=57.35 Aligned_cols=75 Identities=20% Similarity=0.270 Sum_probs=68.1
Q ss_pred HHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHHHHHHHHHHHh
Q 011514 21 GFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAY 100 (484)
Q Consensus 21 ~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~i~~~~~~~ 100 (484)
+++...+.|.+|.+.+|. +.+..+.|++.+...+|++++++...++.++..+++.+..+.+...+..+.+++
T Consensus 5 GigRFayTplLP~M~~~~--------~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~ 76 (85)
T PF06779_consen 5 GIGRFAYTPLLPLMQADG--------GLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMAL 76 (85)
T ss_pred hhHHHHHHhHhHHHHHhc--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 456678899999998775 677778899999999999999999999999988899999999999999999999
Q ss_pred ccc
Q 011514 101 RRS 103 (484)
Q Consensus 101 ~~~ 103 (484)
.++
T Consensus 77 ~~~ 79 (85)
T PF06779_consen 77 THS 79 (85)
T ss_pred Hhc
Confidence 988
No 262
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.02 E-value=9.6e-08 Score=95.87 Aligned_cols=113 Identities=13% Similarity=0.067 Sum_probs=95.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhhcc---chhhHHHhhhhHHHHHHHHhhhhh
Q 011514 282 NQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISW---SAWVIKIFFNKVFKLLLLSFITRK 358 (484)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~f~~~~ 358 (484)
.+.+...+...++..+++ ++.|++.||+|||+.+..+..+..++.++..+.+ +.+. +
T Consensus 46 ~~~~~~~~~~~~g~~~G~-~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~----------~--------- 105 (451)
T PF00083_consen 46 LLSSLLTSSFFIGAIVGA-LIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWM----------L--------- 105 (451)
T ss_pred HHHHHHHHHHHhhhcccc-ccccccccccccccccccccccccccccccccccccccccc----------c---------
Confidence 345778888888899998 7779999999999999999999999999998888 6665 2
Q ss_pred hhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 011514 359 QISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPL 433 (484)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l 433 (484)
.+.-.+.|++.+...+....++.|..|+++||+..++.+....+|..++..+.-.+
T Consensus 106 -------------------~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~ 161 (451)
T PF00083_consen 106 -------------------LIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIV 161 (451)
T ss_pred -------------------cccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 33344889999999999999999999999999999999999888888777665433
No 263
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=98.00 E-value=0.0064 Score=62.08 Aligned_cols=132 Identities=18% Similarity=0.167 Sum_probs=88.2
Q ss_pred HHHHHHHHHHHHHHHhhhhhccccc-CchhHhHHHHHHHHHHHHHHHhccch----------------------hhHHHH
Q 011514 54 GFQQAIIGLGTLVMMPVIGNLSDQY-GRKAMLTLPLTLSIIPLAILAYRRSI----------------------SFFYAY 110 (484)
Q Consensus 54 g~~~s~~~l~~~~~~~~~G~l~Dr~-Grk~~l~~~~~~~~i~~~~~~~~~~~----------------------~~~~~l 110 (484)
.-..+.+.-.+....+..+.++|-| ||-+.+.++.++..++..+..++... .....+
T Consensus 76 a~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~ 155 (571)
T KOG1237|consen 76 ANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVL 155 (571)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHH
Confidence 3445555666666677789999976 89899999888888876554432110 112345
Q ss_pred HHHHHHhhhhccchhhHhhhHHHhhcCC---cc---chhHHHHHHHHHHHhHHhHHHHhhHh----hhhHHHHHHHHHHH
Q 011514 111 YALRTLTAMVCEGSINCLALAYVADNIS---ER---QRASAFGILLGVLSASFVCGTLAARF----LSTTSAFQAATIVS 180 (484)
Q Consensus 111 ~~~r~l~G~~~~g~~~~~~~~~i~~~~~---~~---~r~~~~~~~~~~~~~g~~ig~~l~~~----l~~~~~f~~~~~~~ 180 (484)
+.+.-+..++. |..-|+..+.-+|.++ ++ .+...+.++....+.|..++-.+... .+|...|.+..+..
T Consensus 156 ~~~l~lia~G~-gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~ 234 (571)
T KOG1237|consen 156 YGALYLIALGA-GGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLN 234 (571)
T ss_pred HHHHHHheecc-CCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHH
Confidence 55555555444 6677899999999998 22 22367788888888888887655543 58888888777665
Q ss_pred HHHHHH
Q 011514 181 MLAAAY 186 (484)
Q Consensus 181 ~i~~~~ 186 (484)
.++.++
T Consensus 235 ~lai~i 240 (571)
T KOG1237|consen 235 ALAILI 240 (571)
T ss_pred HHHHHH
Confidence 554443
No 264
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=97.98 E-value=0.021 Score=55.84 Aligned_cols=249 Identities=12% Similarity=0.075 Sum_probs=153.1
Q ss_pred HHHHHHHHHHH-HHHHHHhhhhhcccccCchhHhHHHHHHHHHHHHHHHhccc-------------------h-------
Q 011514 52 LSGFQQAIIGL-GTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRS-------------------I------- 104 (484)
Q Consensus 52 ~~g~~~s~~~l-~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~i~~~~~~~~~~-------------------~------- 104 (484)
...++-+..-+ ..++..++.+.+.+++.|.+++.+-...+....+++++.-. .
T Consensus 62 ~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ 141 (509)
T COG3202 62 SISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWF 141 (509)
T ss_pred hhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceee
Confidence 34566565566 56677788999999999999999888888888777776411 0
Q ss_pred ------hhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHhhhh---------
Q 011514 105 ------SFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLST--------- 169 (484)
Q Consensus 105 ------~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~--------- 169 (484)
+.+..++++.=+.|- -...-.-.....|.+..+|-.|..+..+...+++.+++..+...++-
T Consensus 142 ili~~~Ws~s~~Yi~aELWgs---lV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~~~~~~~~ 218 (509)
T COG3202 142 ILIVGEWSYSLFYIMAELWGS---LVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKHRDALASEF 218 (509)
T ss_pred eEeecchHHHHHHHHHHHHHH---HHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhchhhHhHHH
Confidence 111222333333331 12222567788999999999999999999999999988877766431
Q ss_pred -----HHHHHHHHHHHHHHHHHHHHHccc----CCCCCCCCCCCCCcccccccccCCCCCCCCccCcccCCCCchHHHHH
Q 011514 170 -----TSAFQAATIVSMLAAAYMRVFLKD----DVPNDDDDDLTRPIITEETEGVNQNESNSPVKIPVCKKIPSIRDLIC 240 (484)
Q Consensus 170 -----~~~f~~~~~~~~i~~~~~~~~lpe----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (484)
+..+.+.+....++... .+++.. +|+...+. ..+++.++.+.++.+.++
T Consensus 219 ~~~~~~~~~~vi~~~~~i~~~l-~~~~~r~il~~~~f~~~~---------------------~~kk~~~k~k~~~~~s~k 276 (509)
T COG3202 219 KDLLLQILFIVIVILGIIAILL-YRYINRNVLTDPLFYLRA---------------------KKKKKKKKLKLGLIESFK 276 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHhhcccCcchhHHH---------------------hcccccccccCcHHHHHH
Confidence 22233333233333322 222322 22210000 011112233457888899
Q ss_pred HhhccchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhH---HHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHH
Q 011514 241 LLRSSVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQF---ADLMLIAGLAGTISQLLFMPLLAPILGEAKLLS 317 (484)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~ 317 (484)
.+.++|.++.+.+...+++.+...+....-.-.++.+..+.+.. |.+....++...+.....++.+.+|.|-.....
T Consensus 277 ~i~~SkyL~~ial~vl~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~GW~~~Al 356 (509)
T COG3202 277 MILRSKYLGAIALLVLAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVGWFTGAL 356 (509)
T ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHH
Confidence 99999999999999998888888777766665555544333322 334455566655566577788888888666555
Q ss_pred HhHHHHHH
Q 011514 318 LGLFAACI 325 (484)
Q Consensus 318 ~~~~~~~~ 325 (484)
+.-++..+
T Consensus 357 itPiv~li 364 (509)
T COG3202 357 ITPLVMLI 364 (509)
T ss_pred HHHHHHHH
Confidence 54444333
No 265
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=97.92 E-value=4.8e-05 Score=68.63 Aligned_cols=136 Identities=13% Similarity=0.055 Sum_probs=82.9
Q ss_pred HHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHH
Q 011514 53 SGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAY 132 (484)
Q Consensus 53 ~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~ 132 (484)
.|.+.-.-.+..++..+......||+---.=..+..++.+.+..+.+++++ .++-+.+-.+..+++ |.--. ..--
T Consensus 64 tg~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s---~~~sL~GV~~aSiss-GlGEi-TFL~ 138 (409)
T KOG3880|consen 64 TGAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNS---VPMSLLGVVFASISS-GLGEI-TFLA 138 (409)
T ss_pred cchhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccc---hhHHHhhhhhhhhcC-Cccee-ehhh
Confidence 366677778888888888899999875443344566778888899999999 777777777776543 33322 2222
Q ss_pred HhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHh------hhhHHHHHHHHHHHHHHHHHHHHHcccCCCC
Q 011514 133 VADNISERQRASAFGILLGVLSASFVCGTLAARF------LSTTSAFQAATIVSMLAAAYMRVFLKDDVPN 197 (484)
Q Consensus 133 i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~------l~~~~~f~~~~~~~~i~~~~~~~~lpe~~~~ 197 (484)
.+..+++ ...+.++.+.+.+.++|..--.. +.-|...++...+.++.+..-++.+++++..
T Consensus 139 lss~Y~~----~~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~pes~ 205 (409)
T KOG3880|consen 139 LSSRYPS----IVIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKSPESV 205 (409)
T ss_pred hhccCCC----ceeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCCCccc
Confidence 2222322 22333333334444555432222 2447777777777777766666666665443
No 266
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.89 E-value=0.00011 Score=52.98 Aligned_cols=71 Identities=21% Similarity=0.229 Sum_probs=59.3
Q ss_pred HHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHH
Q 011514 250 QAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFA 322 (484)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~ 322 (484)
.+-...++...+.+....++|.|+++. |+|+.++|.+.++..+...++. .+.|+++||.++++........
T Consensus 4 ~lk~~yf~~f~~~g~~~Pfl~~~~~~~-Gl~~~~iGil~~i~~~~~~~~~-pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 4 PLKAFYFFYFAALGCLYPFLPLYLKQL-GLSPSQIGILSAIRPLIRFLAP-PLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHhhhhc-CCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHCccHHHHHHHHH
Confidence 344566777778888999999999985 9999999999999999999999 5559999999998877655543
No 267
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=97.87 E-value=0.0074 Score=59.72 Aligned_cols=52 Identities=12% Similarity=0.071 Sum_probs=42.2
Q ss_pred hhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHH
Q 011514 378 PYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLI 429 (484)
Q Consensus 378 ~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i 429 (484)
.+.+.++|+..|........+..+.+++++|..+-.+....-.+|-.+|..+
T Consensus 376 ~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 376 IILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred HHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456688999999989888899999998889888888877777777777665
No 268
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.86 E-value=0.00058 Score=67.84 Aligned_cols=160 Identities=18% Similarity=0.249 Sum_probs=104.6
Q ss_pred HHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhh-----cchHHHHHhHHHHHHHHHHHhhccchhhHHH
Q 011514 267 ASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPIL-----GEAKLLSLGLFAACINMFICSISWSAWVIKI 341 (484)
Q Consensus 267 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (484)
.....|+++.+|.++.+...+.....+-..+-- +. |.++|-+ +||.-+.++..+..++...++..+....
T Consensus 10 ~~~~~~l~~~l~ls~~~~~~~~~~~~lPw~~Kp-~~-g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~--- 84 (433)
T PF03092_consen 10 LAIYPFLKDDLGLSPAQLQRLSSLASLPWSIKP-LY-GLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASES--- 84 (433)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHhCchHHhh-hH-HhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccc---
Confidence 345567888899999998888877777666553 55 8999964 3555666677776666665555443111
Q ss_pred hhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccC--CCchhHHHHHHHHHH
Q 011514 342 FFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVG--PNEQGKAQGCISGIS 419 (484)
Q Consensus 342 ~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p--~~~~g~~~g~~~~~~ 419 (484)
......+...+..++.........+...|... ++.+|..++......
T Consensus 85 -------------------------------s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~ 133 (433)
T PF03092_consen 85 -------------------------------SAAIAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVR 133 (433)
T ss_pred -------------------------------hhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHH
Confidence 00001333445667777777777777777762 234888999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHHHHHHhcc
Q 011514 420 SFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSH 470 (484)
Q Consensus 420 ~lg~~~gp~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (484)
.+|+.++..+.|.+.+.. +++.. |.+.+.+..+..+......+
T Consensus 134 ~~G~lv~~~l~G~l~~~~-~~~~~-------f~i~~~~~~l~~~~~~~~~~ 176 (433)
T PF03092_consen 134 SVGSLVGSLLSGPLLDSF-GPQGV-------FLISAALPLLMLIVALFLLE 176 (433)
T ss_pred HHHHHHHHHhhhhhhhcC-CCeEE-------ehHHHHHHHHHHHHHHHhhh
Confidence 999999999999999875 55543 34444444444434444433
No 269
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.83 E-value=0.00082 Score=64.48 Aligned_cols=160 Identities=13% Similarity=-0.021 Sum_probs=99.8
Q ss_pred chhHHHHHHHHHHhchhhh-hH--HHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHH
Q 011514 246 VTLSQAAVVAFFSGLSEGG-MQ--ASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFA 322 (484)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~ 322 (484)
++-|..++...+.++.... .. .-...|.++.|| +....-+...++.+..+... +.+-|+.||+|-|....++...
T Consensus 41 ~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~g-f~~mw~ldk~GLR~a~llgt~l 118 (480)
T KOG2563|consen 41 PRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFG-FAAMWILDKFGLRTALLLGTVL 118 (480)
T ss_pred hhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHh-hHHHHhhcccchHHHHHHHHHH
Confidence 3334444444444444422 22 234446777778 66666778888888888887 7778999999999999999999
Q ss_pred HHHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcc
Q 011514 323 ACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQ 402 (484)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 402 (484)
.+++..+=.....+... ...| .........+.+.........-.-+..-.
T Consensus 119 n~iGa~Ir~iss~p~v~--------------------~~f~----------~~l~~~Gq~iaa~Aq~Fim~lPskiA~~W 168 (480)
T KOG2563|consen 119 NGIGAWIRLISSLPFVP--------------------PLFR----------RPLTHTGQSIAAAAQPFILGLPSKIAAVW 168 (480)
T ss_pred HHHHHHHhhhccCcccc--------------------ccch----------hhhhHHhHHHHHHhhhHhhccccHHHHhh
Confidence 98888765444332110 0000 00012222233333322222222344456
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 011514 403 VGPNEQGKAQGCISGISSFANIVSPLIFSPLTALF 437 (484)
Q Consensus 403 ~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~ 437 (484)
+|+++|+.+..+..+.+.+|..++-.+...+....
T Consensus 169 F~~~qra~A~~~~v~~n~LGvavg~llppilV~~~ 203 (480)
T KOG2563|consen 169 FPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSS 203 (480)
T ss_pred CCcchhhhhhhHHHhcchHHHHHHhhccceecCCC
Confidence 89999999999999999999999888888777763
No 270
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.81 E-value=0.00066 Score=67.33 Aligned_cols=131 Identities=15% Similarity=0.149 Sum_probs=95.0
Q ss_pred HHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHh
Q 011514 292 GLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILK 371 (484)
Q Consensus 292 ~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 371 (484)
++...+.+ .+.|.++||+|||..+........+....+.+.. |.
T Consensus 72 ~~~~~i~s-~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~--~~--------------------------------- 115 (463)
T KOG2816|consen 72 GLLTLISS-PLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG--YW--------------------------------- 115 (463)
T ss_pred HHHHHHHH-hhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH--HH---------------------------------
Confidence 56677777 5559999999999999888887777666655444 22
Q ss_pred hhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCchHH
Q 011514 372 SIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSI 451 (484)
Q Consensus 372 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~~~~~~~~~~ 451 (484)
.+...-...+.+.......+++++...+++|....|+.+.....+..++|.+++.+.... +... ++
T Consensus 116 ------~~~~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~-~~a~-------~f 181 (463)
T KOG2816|consen 116 ------FFLLLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFL-GIAL-------VF 181 (463)
T ss_pred ------HhhhcccccchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhc-CchH-------HH
Confidence 111112223445566778889999999999999999999999999999999999999874 5444 55
Q ss_pred HHHHHHHHHHHHHHHHhccCC
Q 011514 452 MCIGLASMVAFIQSLMMSHTP 472 (484)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~ 472 (484)
.+..+..++........-++.
T Consensus 182 ~ia~~~~~~~~~y~~~~l~Es 202 (463)
T KOG2816|consen 182 LIAAASGILSLLYMLLFLPES 202 (463)
T ss_pred HHHHHHHHHHHHHHhhccccc
Confidence 677666666666555444443
No 271
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.56 E-value=0.0076 Score=50.17 Aligned_cols=107 Identities=16% Similarity=0.080 Sum_probs=81.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHH
Q 011514 289 LIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLK 368 (484)
Q Consensus 289 ~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~ 368 (484)
++......+.. ++.+.+.+++|.|+.+.++.+...+-..... -++.+.
T Consensus 44 ai~Y~~~~~s~-l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~-~~~~~~------------------------------ 91 (156)
T PF05978_consen 44 AILYGSFAISC-LFAPSIVNKLGPKWSMILGSLGYAIYIASFF-YPNSYT------------------------------ 91 (156)
T ss_pred HHHHHHHHHHH-HhHHHHHHHHhhHHHHHHHHHHHHHHHHHHH-hhhHHH------------------------------
Confidence 33344445555 6678899999999999999988876544442 233333
Q ss_pred HHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011514 369 ILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTA 435 (484)
Q Consensus 369 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~ 435 (484)
+.....+.|++.+......-.++.+..+++.+++..|+.-.+.+.+.++|..+.-.+..
T Consensus 92 --------l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~~ 150 (156)
T PF05978_consen 92 --------LYPASALLGFGAALLWTAQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFIFQ 150 (156)
T ss_pred --------HHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 25666789999999999999999999999999999999999999888888877655544
No 272
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=97.45 E-value=0.08 Score=50.91 Aligned_cols=50 Identities=14% Similarity=0.064 Sum_probs=35.3
Q ss_pred hhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHH
Q 011514 378 PYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSP 427 (484)
Q Consensus 378 ~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp 427 (484)
+....++|+..|........+..+.+|++++..+-.+....-..|-..|.
T Consensus 347 ~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~ 396 (406)
T KOG1479|consen 347 IFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGS 396 (406)
T ss_pred HHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhh
Confidence 55666889999988888889999999877775555555444444444443
No 273
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=97.23 E-value=0.02 Score=53.29 Aligned_cols=137 Identities=16% Similarity=0.148 Sum_probs=94.8
Q ss_pred chhhhhHHHHHHHHhhhcCcCh--hhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhhccc--
Q 011514 260 LSEGGMQASFLYFLKAQFHFNK--NQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWS-- 335 (484)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-- 335 (484)
..........+.+..+. +.+. ...+...+...+...++. +..|++.||.|||+.+..+......+.+...+...
T Consensus 16 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (338)
T COG0477 16 LDLGLLSPALPLLLSTL-SLSSGRLLYGLLLSAFFLGYAIGS-LLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVG 93 (338)
T ss_pred HhcchHHHHHHHHHHHc-CCCchhHHHHHHHHHHHHHHHHHh-hhhhhccccccchHHHHHHHHHHHHHHHHHHhCccch
Confidence 33344444566655554 4443 356888888888888887 77799999999997777776654444444444443
Q ss_pred hhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCC-CchhHHHHH
Q 011514 336 AWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGP-NEQGKAQGC 414 (484)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~-~~~g~~~g~ 414 (484)
.+. ........+++.+...+...++..+..|+ ++|+...+.
T Consensus 94 ~~~--------------------------------------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (338)
T COG0477 94 LAL--------------------------------------LLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGL 135 (338)
T ss_pred HHH--------------------------------------HHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHH
Confidence 222 12222236777778888999999999997 678998898
Q ss_pred HHH-HHHHHHHHHHHHHHHHHHh
Q 011514 415 ISG-ISSFANIVSPLIFSPLTAL 436 (484)
Q Consensus 415 ~~~-~~~lg~~~gp~i~g~l~~~ 436 (484)
... ...++..++|.+.+.+.+.
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T COG0477 136 VTLGAGALGLALGPLLAGLLLGA 158 (338)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 888 5788888999888777765
No 274
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.21 E-value=0.0059 Score=59.55 Aligned_cols=105 Identities=16% Similarity=0.131 Sum_probs=76.5
Q ss_pred hHhHHHHHHHHHHHHHHHhccchh------hHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCcc---chhHHHHHHHHH
Q 011514 82 AMLTLPLTLSIIPLAILAYRRSIS------FFYAYYALRTLTAMVCEGSINCLALAYVADNISER---QRASAFGILLGV 152 (484)
Q Consensus 82 ~~l~~~~~~~~i~~~~~~~~~~~~------~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~ 152 (484)
|.+.++.++..+|.++..++.... ..+.++++-.+.+++. |..-|...++.+|.++++ +|.+.+.++..+
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~-G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~ 80 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGT-GGIKPNISPFGADQYDEDDDSRRDSFFNWFYWG 80 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHH-HCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhcc-ccccccHHHHHHHHhcccchhhhhhhHHHHHHH
Confidence 567788888888888854432211 1256677778888755 777899999999999865 567788899999
Q ss_pred HHhHHhHHHHhhHh----hhhHHHHHHHHHHHHHHHHHH
Q 011514 153 LSASFVCGTLAARF----LSTTSAFQAATIVSMLAAAYM 187 (484)
Q Consensus 153 ~~~g~~ig~~l~~~----l~~~~~f~~~~~~~~i~~~~~ 187 (484)
.++|..+++.+.+. .+|...|.+.++..++..+..
T Consensus 81 in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f 119 (372)
T PF00854_consen 81 INIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVF 119 (372)
T ss_dssp HHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHH
T ss_pred HhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHH
Confidence 99999999877766 478999999886665554433
No 275
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=97.20 E-value=0.035 Score=53.76 Aligned_cols=164 Identities=11% Similarity=0.044 Sum_probs=108.2
Q ss_pred hhhhhHHHHHHHHhhh-cCcChhhHHH-HHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhhccchhh
Q 011514 261 SEGGMQASFLYFLKAQ-FHFNKNQFAD-LMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWV 338 (484)
Q Consensus 261 ~~~~~~~~~~~~~~~~-~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (484)
-+-...+++..|+.+. .|++.+|... ++-...-...+.. +....+.|..+.|++++++.+...+...++.+.++...
T Consensus 18 ~frPsEPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l-~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~ 96 (412)
T PF01770_consen 18 EFRPSEPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFL-LPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLA 96 (412)
T ss_pred hcCCCCccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHH-HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHH
Confidence 3445677888888886 7898888653 2222233333333 55578999999999999999988888888877776555
Q ss_pred HHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHH
Q 011514 339 IKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGI 418 (484)
Q Consensus 339 ~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~ 418 (484)
.-..-+..|...+. .....+++-..+|+++--++.+.....
T Consensus 97 --------------------------------------mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa 137 (412)
T PF01770_consen 97 --------------------------------------MQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAA 137 (412)
T ss_pred --------------------------------------HHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHH
Confidence 13333345554443 556678888889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCcccCchHHHHHHHHHHHHHHHHHHhcc
Q 011514 419 SSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCIGLASMVAFIQSLMMSH 470 (484)
Q Consensus 419 ~~lg~~~gp~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (484)
.-+|..++..++-.+.+.. +.+... ...+......++.++.+++++
T Consensus 138 ~l~g~~~s~~lgQllvs~~-~~sy~~-----L~~isl~~~~~a~~~~~fLP~ 183 (412)
T PF01770_consen 138 TLVGRFISSLLGQLLVSFG-GVSYFQ-----LNYISLASVSLALLIALFLPM 183 (412)
T ss_pred HHHHHHHHHHHHHHHHHhc-CCCHHH-----HHHHHHHHHHHHHHHHHHcCC
Confidence 9999888888877666542 322211 223343444455555555544
No 276
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=97.00 E-value=0.0077 Score=43.96 Aligned_cols=77 Identities=14% Similarity=0.136 Sum_probs=64.8
Q ss_pred chhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhhccchhh
Q 011514 260 LSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWV 338 (484)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (484)
.+-..+...+|...+|. ++|..+.|++-+...++..++. +...++.++.++++.+..+.+...+..+.+++.++.+.
T Consensus 6 igRFayTplLP~M~~~~-~ls~~~ag~lasaNy~GYL~GA-l~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~ 82 (85)
T PF06779_consen 6 IGRFAYTPLLPLMQADG-GLSLSQAGWLASANYLGYLVGA-LLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWL 82 (85)
T ss_pred hHHHHHHhHhHHHHHhc-CCCHHHHHHHHHHHHHHHHHHH-HHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHH
Confidence 34456677788866665 9999999999999999999999 77788888888889999999999999999998877654
No 277
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=96.99 E-value=0.088 Score=52.46 Aligned_cols=177 Identities=11% Similarity=-0.054 Sum_probs=95.4
Q ss_pred chhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCc-----ChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhH
Q 011514 246 VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHF-----NKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGL 320 (484)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~ 320 (484)
|.+....+..|+..+.+... --++|.... +.+...++.+...+...+....+.+++++|++|+++.....
T Consensus 7 ~k~~~~~l~fF~il~~Y~iL-----R~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~ 81 (472)
T TIGR00769 7 KKFLPLFLMFFCILFNYTIL-----RDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVI 81 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHH-----HhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHH
Confidence 34444555555544333322 225666555 33566777776666556653355699999999999877666
Q ss_pred HHHHHHHHHHhhc--cchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhh-HHHH
Q 011514 321 FAACINMFICSIS--WSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATP-SFRS 397 (484)
Q Consensus 321 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~ 397 (484)
......+.++++. +.....+ ++....... ...+....|.+ ..+..|...+. .+...+......+ ..++
T Consensus 82 ~~F~~~f~lF~~vl~p~~~~~~-p~~~~~~~~----~~~~~~~~~~i--~~~~~W~~~~F--Yv~~elw~~~vvS~lFW~ 152 (472)
T TIGR00769 82 SPFLGFFALFAFVIYPLSDLLH-PTALADKLL----SLLPPGFMGFI--AILRIWSFALF--YVMAELWGSVVLSLLFWG 152 (472)
T ss_pred HHHHHHHHHHHHHHhcchhhcC-CcHHHHHHH----hhcchhhHHHH--HHHhhhhHHHH--HHHHHHHHHHHHHHHHHH
Confidence 5555555544432 1110000 000000000 00000000000 01111111111 1122233333444 7788
Q ss_pred HHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 011514 398 IVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 436 (484)
Q Consensus 398 ~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~ 436 (484)
+++|...+++..|-+++.....++|..+++.+..++.+.
T Consensus 153 fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~~ 191 (472)
T TIGR00769 153 FANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSKL 191 (472)
T ss_pred HHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999998887753
No 278
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=96.94 E-value=0.00016 Score=73.36 Aligned_cols=176 Identities=10% Similarity=0.006 Sum_probs=2.8
Q ss_pred chhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhhccchhhH
Q 011514 260 LSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWVI 339 (484)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (484)
....++....-.-++++++++..+.|.+.+.+-++..+.. ++..+..+|..|-|.+-.+.++++++.+++.+.+-....
T Consensus 16 ~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~-~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~ 94 (539)
T PF03137_consen 16 MMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVV-LFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGP 94 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCC
Confidence 4444444444456788899999999999999999999998 555788888888888889999999998887754321100
Q ss_pred -----HH---hhhhHHHHHH---HHhhhhhh-hhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCc
Q 011514 340 -----KI---FFNKVFKLLL---LSFITRKQ-ISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNE 407 (484)
Q Consensus 340 -----~~---~~~~~~~~~~---~~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~ 407 (484)
.. .......... ..--.+.. ...-.-.-+..+.....++...++.|+|....++...+++-|.+++++
T Consensus 95 y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~ 174 (539)
T PF03137_consen 95 YSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKN 174 (539)
T ss_dssp ---------------------------------------------------------SSS--------------------
T ss_pred CccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeecccccccc
Confidence 00 0000000000 00000000 000000001111112234566678899999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 011514 408 QGKAQGCISGISSFANIVSPLIFSPLTAL 436 (484)
Q Consensus 408 ~g~~~g~~~~~~~lg~~~gp~i~g~l~~~ 436 (484)
.+...|+......+|-++|=.+++...+.
T Consensus 175 splYiGi~~~~~~lGPa~Gf~lg~~~L~~ 203 (539)
T PF03137_consen 175 SPLYIGILYAMSILGPALGFLLGSFCLRI 203 (539)
T ss_dssp -----------------------------
T ss_pred CccchhhhhHHhhccHHHHHHHHHHHHhc
Confidence 99999999999999988888888877654
No 279
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=96.76 E-value=0.0024 Score=61.49 Aligned_cols=161 Identities=11% Similarity=0.060 Sum_probs=109.5
Q ss_pred chhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhh----hcchHHH-HHhH
Q 011514 246 VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPI----LGEAKLL-SLGL 320 (484)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~g~~~~~-~~~~ 320 (484)
+.+.......+...++...-.++.+.|+++. |.+....+.......+.+.+.++++ |..+|| +||||.. ..+.
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~~l-Gvphk~~S~iw~~gPi~G~~vQP~v-G~~SDrc~sr~GRRRPfI~~~s 109 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQSL-GVPHKWSSIIWLCGPLSGLLVQPLV-GSASDRCTSRYGRRRPFILAGS 109 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHHHc-CCCcccccccccccccccceecccc-cccccccccccccccchHHHhh
Confidence 3444555566666777777788899999886 9999998999888899999999555 999994 6776654 4555
Q ss_pred HHHHHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhh--hhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHH
Q 011514 321 FAACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQ--ISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSI 398 (484)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 398 (484)
....++++++++...... .+..+.. .-.+-+. +.++...+.-+..........++
T Consensus 110 ~~i~~~l~Lig~aaDig~--------------~lgd~~~~~~~~rai~---------~~~lg~~LLD~A~n~~qgp~ra~ 166 (498)
T KOG0637|consen 110 LLIAVSLFLIGYAADIGL--------------LLGDNERKPVKPRAIV---------LFILGFWLLDVANNTLQGPCRAL 166 (498)
T ss_pred HHHHHHHhhhhhHhhhhH--------------HhcCCcccccchHHHH---------HHHHHhHHHHhhhhhhhhhHHHH
Confidence 667777777776554222 0001110 0000000 01333335556666777888999
Q ss_pred HhcccCCCchhH-HHHHHHHHHHHHHHHHHHHHH
Q 011514 399 VSKQVGPNEQGK-AQGCISGISSFANIVSPLIFS 431 (484)
Q Consensus 399 ~~~~~p~~~~g~-~~g~~~~~~~lg~~~gp~i~g 431 (484)
..|...++++.+ +.+.......+|+.+|=.+++
T Consensus 167 L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~ 200 (498)
T KOG0637|consen 167 LADLARGDAKKTRANSVFSFFMAVGNVLGYALGS 200 (498)
T ss_pred HHHhccChhhhhccchhHHHHHHhcceeeeeccc
Confidence 999998887777 999999999999888766654
No 280
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.68 E-value=0.0078 Score=62.06 Aligned_cols=197 Identities=9% Similarity=0.079 Sum_probs=132.7
Q ss_pred hhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhhccchh-----h
Q 011514 264 GMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAW-----V 338 (484)
Q Consensus 264 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 338 (484)
++....-.-++++++++..+.|++.+.+-++..+.. ....+...|..|-+.+-+|.++++++.++..+.+-.. .
T Consensus 114 ~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i-~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~ 192 (735)
T KOG3626|consen 114 GYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLI-IFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYE 192 (735)
T ss_pred hhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhh-HhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhh
Confidence 555555556888899999999999999989888888 4447888888888888999999999988877542100 0
Q ss_pred H-H-----HhhhhHHHHHHH----Hhh----------hhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHH
Q 011514 339 I-K-----IFFNKVFKLLLL----SFI----------TRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSI 398 (484)
Q Consensus 339 ~-~-----~~~~~~~~~~~~----~f~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 398 (484)
. . ....+-..+... .+. ++.+...|++ ++...++.|+|....++...++
T Consensus 193 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll-----------ff~~q~l~GIG~Tpi~tlGisY 261 (735)
T KOG3626|consen 193 LEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLL-----------FFLGQLLLGIGATPIFTLGISY 261 (735)
T ss_pred hhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHH-----------HHHHHHHhhcCCCCCccCCCcc
Confidence 0 0 000000000000 000 0001113333 2666778899999999999999
Q ss_pred HhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-CC--------CcccCc---hHHHHHHHHHHHHHHHHH
Q 011514 399 VSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSK-GA--------PFNFPG---FSIMCIGLASMVAFIQSL 466 (484)
Q Consensus 399 ~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~-~~--------~~~~~~---~~~~~~~~~~~~~~~~~~ 466 (484)
+-|.+.+++.....|+..++..+|-++|=.+++.+.....+. .. |- |.| +.|++.+.+.++..+..+
T Consensus 262 iDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPr-WIGAWWlGFLi~g~~~~~~a~p~f 340 (735)
T KOG3626|consen 262 IDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPR-WIGAWWLGFLICGALLLFSAVPLF 340 (735)
T ss_pred ccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcc-hhhHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998887765443 11 11 111 245777777777777777
Q ss_pred HhccCCC
Q 011514 467 MMSHTPA 473 (484)
Q Consensus 467 ~~~~~~~ 473 (484)
+.+++.+
T Consensus 341 ~fPk~lp 347 (735)
T KOG3626|consen 341 FFPKELP 347 (735)
T ss_pred hCcccCc
Confidence 7666543
No 281
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.60 E-value=0.073 Score=52.49 Aligned_cols=150 Identities=18% Similarity=0.220 Sum_probs=98.0
Q ss_pred HHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccc---cCchhHhH
Q 011514 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQ---YGRKAMLT 85 (484)
Q Consensus 9 ~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr---~Grk~~l~ 85 (484)
.+..+....+..++..+......|.-+.-....+.++ ....++..-...++..+++.+.+.+++| +||++.+.
T Consensus 241 ~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~----~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~ 316 (461)
T KOG3098|consen 241 KMLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNT----TYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVL 316 (461)
T ss_pred hHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcc----hhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchh
Confidence 3444444555555555555555555443221112222 2233455555567777777778888764 78999999
Q ss_pred HHHHHHHHHHHHHHhccch---------------hhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHH
Q 011514 86 LPLTLSIIPLAILAYRRSI---------------SFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILL 150 (484)
Q Consensus 86 ~~~~~~~i~~~~~~~~~~~---------------~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~ 150 (484)
++..+..++.++.-..... +.....++.-++.|+ +.+......+.++.+.. +++|..+.++..
T Consensus 317 ~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~-~D~~~~t~~~~ii~~~~-~~~~~~~fsi~k 394 (461)
T KOG3098|consen 317 IGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGF-GDACFNTQRYVIIALLY-PDDRAQAFSLFK 394 (461)
T ss_pred HHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhh-HHHHHHHHHHHHHHHHh-cCchHHHHHHHH
Confidence 9988888887776653211 124567788899995 66888888899999999 688899999888
Q ss_pred HHHHhHHhHHHHhh
Q 011514 151 GVLSASFVCGTLAA 164 (484)
Q Consensus 151 ~~~~~g~~ig~~l~ 164 (484)
.-..++..++-...
T Consensus 395 fyq~~~s~v~~f~~ 408 (461)
T KOG3098|consen 395 FYQSVASCVAFFFS 408 (461)
T ss_pred HHHHHHHHHHhhhh
Confidence 88777766654433
No 282
>PRK03612 spermidine synthase; Provisional
Probab=96.30 E-value=0.44 Score=48.50 Aligned_cols=145 Identities=14% Similarity=0.058 Sum_probs=74.0
Q ss_pred HHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHH-
Q 011514 12 HLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTL- 90 (484)
Q Consensus 12 ~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~- 90 (484)
.+....|+.+++.-.+--+..-+....+ +.+....+.+.+++..+..+++.+.|++.++--|+.. ..-..+
T Consensus 18 ~l~~~~f~sg~~~L~yEv~~~r~l~~~~-------G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~-~~e~~i~ 89 (521)
T PRK03612 18 LLLAAVFVCAACGLVYELLLGTLASYLL-------GDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFV-AVELLLA 89 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh-------CchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH-HHHHHHH
Confidence 4444555555444333333333333332 3334455888999999999998888887644323322 111111
Q ss_pred --HHHHHHHHHhccch--hhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHh
Q 011514 91 --SIIPLAILAYRRSI--SFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF 166 (484)
Q Consensus 91 --~~i~~~~~~~~~~~--~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~ 166 (484)
..++..+......+ .....++...++.++.. |...|....+..+... ++-++..|.......+|.++|+++.++
T Consensus 90 l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l~-G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~ 167 (521)
T PRK03612 90 LLGGLSALILYAAFAFQGLSRLLLYVLVLLIGLLI-GMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPF 167 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHH
Confidence 11111111111110 00112233344455444 4556766665554332 234667788888888888888877765
No 283
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=96.26 E-value=0.14 Score=48.19 Aligned_cols=76 Identities=20% Similarity=0.248 Sum_probs=51.8
Q ss_pred hHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHH
Q 011514 8 KTLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLP 87 (484)
Q Consensus 8 ~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~ 87 (484)
+....++.+.++...+.-+--.....++.++ +.+...+ ...-..+-....++.+++.|...|+..|+|++...
T Consensus 27 ~~~i~Ly~gy~lt~wgdR~W~F~VsL~M~~L---~gnsl~l----vAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~ 99 (503)
T KOG2601|consen 27 STVIFLYLGYFLTTWGDRMWEFSVSLFMILL---GGNSLLL----VAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTW 99 (503)
T ss_pred ceeehhhHHHHHhHhhHhHHHHHHHHHHHHH---cCceehh----HHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHH
Confidence 3445677888888888777666777777666 3333222 23333344555677888899999999999998876
Q ss_pred HHH
Q 011514 88 LTL 90 (484)
Q Consensus 88 ~~~ 90 (484)
+.+
T Consensus 100 L~l 102 (503)
T KOG2601|consen 100 LLL 102 (503)
T ss_pred Hhh
Confidence 554
No 284
>PRK03612 spermidine synthase; Provisional
Probab=96.21 E-value=0.6 Score=47.57 Aligned_cols=150 Identities=13% Similarity=0.090 Sum_probs=84.7
Q ss_pred HHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHH
Q 011514 251 AAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFIC 330 (484)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~ 330 (484)
+.+..++..++...++..+.-.+...+|-+....+.+.+++-.+..+++ .+++++.++..+ +....-..+..++.+..
T Consensus 19 l~~~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs-~l~~~~~~~~~~-~~~~~e~~i~l~~~~~~ 96 (521)
T PRK03612 19 LLAAVFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGA-LLSKYLLRDAAA-GFVAVELLLALLGGLSA 96 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHH-HHHHhhhhhHHH-HHHHHHHHHHHHHHHHH
Confidence 3444455555666667777777777789888888888888888888887 555666533222 22111111111111100
Q ss_pred h--hccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCCCch
Q 011514 331 S--ISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGPNEQ 408 (484)
Q Consensus 331 ~--~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~ 408 (484)
. .....+. . ...+. .....++.++..|+..|....+..+... ++.
T Consensus 97 ~ll~~~~~~~----~--~~~~~--------------------------~~~~~~~~~~l~G~~~Pl~~~~~~~~~~-~~~ 143 (521)
T PRK03612 97 LILYAAFAFQ----G--LSRLL--------------------------LYVLVLLIGLLIGMEIPLLMRILQRIRD-QHL 143 (521)
T ss_pred HHHHHHHHHH----H--HHHHH--------------------------HHHHHHHHHHHHHHHHHHHHHHHHhccc-cch
Confidence 0 0000000 0 00000 0222335567777778877666654322 345
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011514 409 GKAQGCISGISSFANIVSPLIFSPLTA 435 (484)
Q Consensus 409 g~~~g~~~~~~~lg~~~gp~i~g~l~~ 435 (484)
|+..|-....+.+|+++|+++.+++.-
T Consensus 144 g~~~g~ly~~ntlGa~~G~l~~~~vLl 170 (521)
T PRK03612 144 GHNVATVLAADYLGALVGGLAFPFLLL 170 (521)
T ss_pred hhhhhhhHhHHhHHHHHHHHHHHHHHH
Confidence 677888889999999999999988765
No 285
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=96.01 E-value=0.21 Score=48.37 Aligned_cols=109 Identities=11% Similarity=0.147 Sum_probs=75.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHH--H---HHHHHHHHHhccchhhHHHHHHHHHHhhhhccch
Q 011514 50 IYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLT--L---SIIPLAILAYRRSISFFYAYYALRTLTAMVCEGS 124 (484)
Q Consensus 50 ~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~--~---~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~ 124 (484)
..+.-+....|.+|..++.--...+ |+ |+..+.+.+ + ..+....+-+.++ .|..++.-+..|+.+ |.
T Consensus 280 r~~Y~~Y~~~YQ~GVFISRSS~~~~--ri--r~lwils~LQ~~nl~~~~l~s~~~fips---i~ivf~lif~eGLlG-Ga 351 (402)
T PF02487_consen 280 RDQYRWYQLLYQLGVFISRSSLPFF--RI--RRLWILSLLQVINLVFLLLQSWYRFIPS---IWIVFVLIFYEGLLG-GA 351 (402)
T ss_pred HHHHHHHHHHHHHHHhhhhcceeee--eh--hhHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHhh-hH
Confidence 3466777888888877765432221 33 333333222 2 2222223334556 788888899999866 66
Q ss_pred hhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHh
Q 011514 125 INCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARF 166 (484)
Q Consensus 125 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~ 166 (484)
.+......+.|..|+++|..+++....+-++|..++.+++-.
T Consensus 352 ~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~ 393 (402)
T PF02487_consen 352 SYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLP 393 (402)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 677888899999999999999999999999999998887754
No 286
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=95.75 E-value=0.074 Score=51.85 Aligned_cols=86 Identities=9% Similarity=-0.001 Sum_probs=65.9
Q ss_pred hhHHHHHHHhhhhhhhHHHHHHhcccCCC---chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcccCchHHHHH
Q 011514 378 PYATTAFSVLVVFATPSFRSIVSKQVGPN---EQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPFNFPGFSIMCI 454 (484)
Q Consensus 378 ~~~~~~~g~~~~~~~~~~~~~~~~~~p~~---~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~~~~~~~~~~~~~ 454 (484)
.....++++|.|..=|...++..|.++++ +|.+.+.......++|..+++.+.+++.+.. ++.. .|.+.
T Consensus 37 ~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~-~~~~-------~f~i~ 108 (372)
T PF00854_consen 37 YIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNY-GWFL-------GFGIP 108 (372)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS--HHH-------HHHHH
T ss_pred HHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhcccc-chhh-------hhhHH
Confidence 45566889999999999999999999865 4667888889999999999999999998764 4443 56777
Q ss_pred HHHHHHHHHHHHHhccC
Q 011514 455 GLASMVAFIQSLMMSHT 471 (484)
Q Consensus 455 ~~~~~~~~~~~~~~~~~ 471 (484)
++..+++.+..+.-++.
T Consensus 109 ~~~~~~~~~~f~~~~~~ 125 (372)
T PF00854_consen 109 AIGMLLALIVFLSGRKR 125 (372)
T ss_dssp HHHHHHHHHHHHCCCCT
T ss_pred HHHHHHHHHHHHhCCcC
Confidence 77777766655544433
No 287
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=95.42 E-value=0.45 Score=45.20 Aligned_cols=157 Identities=10% Similarity=0.045 Sum_probs=78.2
Q ss_pred cchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHH--HHHHHHHHHHHHHHhhhhhcchHHH-HHhHH
Q 011514 245 SVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIA--GLAGTISQLLFMPLLAPILGEAKLL-SLGLF 321 (484)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~g~~~~~-~~~~~ 321 (484)
++.+..+...+.......+... .+|..++.. |.|-.+.+.+-..+ ...-.+-++++=..-.+|+||||.- .-+..
T Consensus 30 ~~~illLl~LYllQGiP~GL~~-~iP~lL~ak-~vSyt~~a~fS~ay~P~sLKllWaPiVDs~y~k~~GrrksWvvp~q~ 107 (510)
T KOG3574|consen 30 RSSILLLLFLYLLQGIPLGLIG-AIPLLLQAK-GVSYTSQAIFSFAYWPFSLKLLWAPIVDSVYSKRFGRRKSWVVPCQY 107 (510)
T ss_pred hhhHHHHHHHHHHcCCchhHhh-hhHHHhcCC-CcchhhhhhhhhhhhHHHHHHHHHhhhHHHHHHhhccccceeeehHH
Confidence 3566666777777777666555 889988855 66665544432211 1112222222222333499998753 33444
Q ss_pred HHHHHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhc
Q 011514 322 AACINMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSK 401 (484)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 401 (484)
+....+..+....+.+.. .++..+..+. ..+...+.-+..+.--.......-.
T Consensus 108 llG~~mllLs~~v~~~~g----------------~ng~~p~v~~-----------lt~~f~LLnflaAtQDIAVDgwALt 160 (510)
T KOG3574|consen 108 LLGLFMLLLSYLVDRGLG----------------GNGGLPNVVA-----------LTLLFLLLNFLAATQDIAVDGWALT 160 (510)
T ss_pred HHHHHHHHHhhCCCcccc----------------cCCCCcchHH-----------HHHHHHHHHHHHhhhhhhhhHHHHH
Confidence 455555555544433330 0110000000 0112223333333334445556666
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHHHHHHH
Q 011514 402 QVGPNEQGKAQGCISGISSFANIVSPLIF 430 (484)
Q Consensus 402 ~~p~~~~g~~~g~~~~~~~lg~~~gp~i~ 430 (484)
+..+++.|-+.......+..|.+++..++
T Consensus 161 mLs~e~lgyaST~q~Vg~~~GyfL~~~if 189 (510)
T KOG3574|consen 161 MLSRENLGYASTCQSVGQTAGYFLGNVVF 189 (510)
T ss_pred hcCHhhcCchhHHHHHHHhhhHHhhccee
Confidence 67777777766666666666666655443
No 288
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=95.09 E-value=0.9 Score=44.85 Aligned_cols=129 Identities=13% Similarity=0.013 Sum_probs=86.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHHHHHHHHHHH---hccc----hhhHHHHHHHHHHhhh
Q 011514 47 SLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILA---YRRS----ISFFYAYYALRTLTAM 119 (484)
Q Consensus 47 ~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~i~~~~~~---~~~~----~~~~~~l~~~r~l~G~ 119 (484)
+.+....|..-+...+..+.+.....++.+|+|..|.=..+......+..++. +.+. ......++.+-.+.=+
T Consensus 289 G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~ 368 (432)
T PF06963_consen 289 GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRI 368 (432)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHH
Confidence 56667789999999999999999999999999998877766665444333322 2222 1112333333333222
Q ss_pred hccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhHhhhhHHHHHHH
Q 011514 120 VCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAARFLSTTSAFQAA 176 (484)
Q Consensus 120 ~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~~f~~~ 176 (484)
|-=+.- -+..-++.|..|+++||...|...+..++--++-..++-.+....-|...
T Consensus 369 GLW~fD-L~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii~~~P~~F~~l 424 (432)
T PF06963_consen 369 GLWSFD-LAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTIIFPRPSQFGWL 424 (432)
T ss_pred HHHhhh-HHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhccCChHhcChH
Confidence 221333 47888899999999999999999998888877776666554444444333
No 289
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=94.22 E-value=4.1 Score=36.83 Aligned_cols=50 Identities=0% Similarity=-0.123 Sum_probs=29.3
Q ss_pred cchhHHHHHHHHHHHhHHhHH--HHhhH-------hhhhHHHHHHHHHHHHHHHHHHHH
Q 011514 140 RQRASAFGILLGVLSASFVCG--TLAAR-------FLSTTSAFQAATIVSMLAAAYMRV 189 (484)
Q Consensus 140 ~~r~~~~~~~~~~~~~g~~ig--~~l~~-------~l~~~~~f~~~~~~~~i~~~~~~~ 189 (484)
++|+........++++|.++. |.+-. .-.|+..+.+.+++.++-+++...
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~i 60 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYII 60 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455555556666667776554 33222 126888888888666665544433
No 290
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=91.67 E-value=0.86 Score=41.20 Aligned_cols=55 Identities=15% Similarity=0.200 Sum_probs=37.8
Q ss_pred HHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHH
Q 011514 271 YFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACIN 326 (484)
Q Consensus 271 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~ 326 (484)
+|+-+.+|+...++|.++...-...++.. .+.+-+.||.|||+.-..-.+...++
T Consensus 61 YyLYstYgFgkG~IgqLfiaGfgSsmLFG-tivgSLaDkqGRKracvtycitYiLs 115 (454)
T KOG4332|consen 61 YYLYSTYGFGKGDIGQLFIAGFGSSMLFG-TIVGSLADKQGRKRACVTYCITYILS 115 (454)
T ss_pred eeeehhcCccCCccceeeecccchHHHHH-HHHHHHHhhhccccceeeehHHHHHH
Confidence 45666789999998887766555555555 55588999999998654444444333
No 291
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=91.63 E-value=3.4 Score=42.54 Aligned_cols=175 Identities=13% Similarity=0.061 Sum_probs=105.5
Q ss_pred HHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhh-hcchHHHHHhHHHHHHHHHH
Q 011514 251 AAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPI-LGEAKLLSLGLFAACINMFI 329 (484)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~g~~~~~~~~~~~~~~~~~~ 329 (484)
.+....+...+..+....+-.|+.+.++.+..++.-.....+....... +.+++++|- .||-+.+.++.++...+..+
T Consensus 42 il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~-l~g~~laD~f~gry~tI~~~s~i~~~G~~~ 120 (571)
T KOG1237|consen 42 ILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLP-LLGAFLADSFLGRYFTINIGSLISLLGLFG 120 (571)
T ss_pred HHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHH-HHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 4444455556666666777788888888888777766666666666665 777999995 58888888888888777665
Q ss_pred HhhccchhhHHHhhhhHHHHHHHHhhhh----hhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccCC
Q 011514 330 CSISWSAWVIKIFFNKVFKLLLLSFITR----KQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVGP 405 (484)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~ 405 (484)
+.......... +..+ .+-+. ....-+... .+.....+...|.+..-|...++-.|.+++
T Consensus 121 lt~~a~~~~l~-------p~~~-~~~~~~~~c~~~s~~q~~---------~~~~~l~lia~G~gg~r~~~~~fGadQfd~ 183 (571)
T KOG1237|consen 121 LTLSAMIPALL-------PFMC-KFKPGGNVCESPSKLQLA---------VLYGALYLIALGAGGIRPCLLAFGADQFDE 183 (571)
T ss_pred HHHHHHhhhcC-------Cccc-cCCCCCCcccCcchHHHH---------HHHHHHHHheeccCCCCCcchhhcccccCc
Confidence 54432211100 0000 00000 000000000 012233366678888889999999988882
Q ss_pred ----Cchh--HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCc
Q 011514 406 ----NEQG--KAQGCISGISSFANIVSPLIFSPLTALFLSKGAPF 444 (484)
Q Consensus 406 ----~~~g--~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~~~ 444 (484)
+.+. +-+.......+.|..++-.+.-++.+.. +....+
T Consensus 184 ~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~-~w~lgf 227 (571)
T KOG1237|consen 184 LDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNV-GWKLGF 227 (571)
T ss_pred cCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcc-cceeec
Confidence 2223 5677777788888888777776665553 544443
No 292
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=91.28 E-value=0.13 Score=45.84 Aligned_cols=147 Identities=13% Similarity=0.025 Sum_probs=77.5
Q ss_pred cchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHH
Q 011514 245 SVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAAC 324 (484)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~ 324 (484)
+-.+....+.+.+.-.-...-+.+++.|..+.++++.+..+.+-++..+.....+.+..-.--++.+.|.....|.+...
T Consensus 200 ~v~~YQiAllYmLsRL~iNiSQaYlaFfviddlqm~qsakAllP~v~Yl~SF~VS~v~~eipwngkrlKayYsaGgiiwi 279 (412)
T KOG4830|consen 200 HVQFYQIALLYMLSRLYINISQAYLAFFVIDDLQMEQSAKALLPMVAYLSSFSVSMVNSEIPWNGKRLKAYYSAGGIIWI 279 (412)
T ss_pred hhHHHHHHHHHHHHHHHhhhhhhheeeEEeehhhHHHHHhhhhHHHHHHhhhhHHhhcccCCcCcceeeeeeecccHHHH
Confidence 34556666666666666667778889888888888777666665555555554442221111112222333344444443
Q ss_pred HHHHHHhhccchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhhhHHHHHHhcccC
Q 011514 325 INMFICSISWSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFATPSFRSIVSKQVG 404 (484)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p 404 (484)
.+...+.+.+..+.. + ......++|+..+.......++......
T Consensus 280 fcga~ilLlpr~i~s--------------y----------------------myAisvfIGIAnAimlvtslsitavli~ 323 (412)
T KOG4830|consen 280 FCGAVILLLPRGIKS--------------Y----------------------MYAISVFIGIANAIMLVTSLSITAVLIN 323 (412)
T ss_pred HhhhheeecccchHH--------------H----------------------HHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 333333333333320 0 0223335666666655555555555554
Q ss_pred C--CchhHHHHHHHHHHHHHHHHHH
Q 011514 405 P--NEQGKAQGCISGISSFANIVSP 427 (484)
Q Consensus 405 ~--~~~g~~~g~~~~~~~lg~~~gp 427 (484)
+ +..+.+.|..+.+-.+.+.++-
T Consensus 324 ~~~~~~aFv~GamSF~DKlS~GiA~ 348 (412)
T KOG4830|consen 324 KNTESGAFVYGAMSFFDKLSNGIAY 348 (412)
T ss_pred cccCCceEEEehHHHHHhhcccHHH
Confidence 3 3345566777777776655543
No 293
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=90.95 E-value=14 Score=34.75 Aligned_cols=97 Identities=18% Similarity=0.132 Sum_probs=58.5
Q ss_pred HHHHHHHHhhhhhcccccCchhHhHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCC--
Q 011514 61 GLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNIS-- 138 (484)
Q Consensus 61 ~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~-- 138 (484)
.+.-..++.+.+.+..++|-|..+.++...+..... .+-..-+..++-.-...|++. +.....--+|+++...
T Consensus 68 y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA----~Nl~pr~~tlVPa~~~~G~aa-~p~W~SkgtYlT~~g~~y 142 (390)
T KOG3097|consen 68 YLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIA----ANLEPRYETLVPAGLVLGMAA-GPIWASKGTYLTPMGQNY 142 (390)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH----hhcchhHHhhccHHHhhcccc-ccccccCcceecHHHHHH
Confidence 344445555566888999999999887776654332 222233677888888999755 6655555566665543
Q ss_pred ccch---------hHHHHHHHHHHHhHHhHHHH
Q 011514 139 ERQR---------ASAFGILLGVLSASFVCGTL 162 (484)
Q Consensus 139 ~~~r---------~~~~~~~~~~~~~g~~ig~~ 162 (484)
.++| .+.++...+.+.-+..+|..
T Consensus 143 a~~~~~q~~~~~~~~ffg~Ffii~~~~qv~gn~ 175 (390)
T KOG3097|consen 143 ANQRGEQAGDGMKVRFFGEFFIIFQCAQVWGNL 175 (390)
T ss_pred HHhhhhhccCceeeeehhHHHHHHHHHHHHHHH
Confidence 2233 34555555555555555433
No 294
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=90.61 E-value=13 Score=33.73 Aligned_cols=32 Identities=6% Similarity=-0.037 Sum_probs=14.7
Q ss_pred hhhhhHHHHHHHHhhhc----CcChhhHHHHHHHHH
Q 011514 261 SEGGMQASFLYFLKAQF----HFNKNQFADLMLIAG 292 (484)
Q Consensus 261 ~~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~ 292 (484)
..++....=..|.++.- +-+.....+.++-..
T Consensus 193 vlyGs~fvPv~Yi~~~~~~y~~as~~~ldYvFs~f~ 228 (254)
T PF07857_consen 193 VLYGSNFVPVIYIQDHPDIYPGASQNGLDYVFSHFS 228 (254)
T ss_pred HHHhcccchHHHHHhCccccCCCCCcchheeHHHHh
Confidence 33443433344666653 334444444544433
No 295
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=90.00 E-value=4.4 Score=40.34 Aligned_cols=111 Identities=11% Similarity=0.108 Sum_probs=72.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhcccccCch-hHhHHHHHHHHHHH---HHHHhcc------chhhHHHHHHHHHHhhhhc
Q 011514 52 LSGFQQAIIGLGTLVMMPVIGNLSDQYGRK-AMLTLPLTLSIIPL---AILAYRR------SISFFYAYYALRTLTAMVC 121 (484)
Q Consensus 52 ~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk-~~l~~~~~~~~i~~---~~~~~~~------~~~~~~~l~~~r~l~G~~~ 121 (484)
..-....+++++-.+|..+..+. ..-++| +.+.+..+...+.. ++|..-+ -...-+..++.-++.|+ .
T Consensus 308 ~~~i~~~~fNvgD~vGR~~~~~~-~~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gl-t 385 (437)
T TIGR00939 308 YPIICFLLFNLFDWLGRSLTSKF-MWPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGF-S 385 (437)
T ss_pred HHHHHHHHHHHHHHHHhhhhhee-EeeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHH-h
Confidence 44577888999999988755432 111222 13333344333332 3332221 01114666777888996 4
Q ss_pred cchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhh
Q 011514 122 EGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAA 164 (484)
Q Consensus 122 ~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~ 164 (484)
.|.....+..+..+..++++|..+-.+...+..+|..+|..++
T Consensus 386 nGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~ 428 (437)
T TIGR00939 386 NGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLS 428 (437)
T ss_pred hhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4777778888899999999999999999999888888887665
No 296
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=89.84 E-value=0.12 Score=48.99 Aligned_cols=52 Identities=17% Similarity=0.163 Sum_probs=3.6
Q ss_pred hhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHH
Q 011514 378 PYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLI 429 (484)
Q Consensus 378 ~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i 429 (484)
++.+.++++..|........+..+.+++++|..+-.+....-..|-.+|..+
T Consensus 252 ~i~~~l~g~TNGyl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~l 303 (309)
T PF01733_consen 252 IILMLLFGFTNGYLSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVL 303 (309)
T ss_dssp ---------------HHHH---------------------------------
T ss_pred HHHHHHHHHccchhhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456688999999999999999999998888887777777777666666554
No 297
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=85.89 E-value=42 Score=33.96 Aligned_cols=176 Identities=12% Similarity=0.016 Sum_probs=89.7
Q ss_pred chhHHHHHHHHHHhchhhhhHHHHHHHHhhhc---CcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHH
Q 011514 246 VTLSQAAVVAFFSGLSEGGMQASFLYFLKAQF---HFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFA 322 (484)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~ 322 (484)
+++..+.+..|+..+.+...-. ++|.+ ..+++...++=....+-..+....+..++++++++.++..+....
T Consensus 24 ~k~~~l~~m~f~i~f~y~~lR~-----~KD~lvvt~~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~ 98 (491)
T PF03219_consen 24 KKFLPLALMFFFILFNYTILRD-----LKDTLVVTAQGAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIP 98 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-----hcCeEEEecCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 5566666666665544433222 23322 224555555544333333333335568999999999877655555
Q ss_pred HHHHHHHHhhc--cchhhHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHHHhhhccchhhHHHHHHHhhhhhh-hHHHHHH
Q 011514 323 ACINMFICSIS--WSAWVIKIFFNKVFKLLLLSFITRKQISVHVLLLKILKSIFMQVPYATTAFSVLVVFAT-PSFRSIV 399 (484)
Q Consensus 323 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~ 399 (484)
....+.++++. +..... .++........ ..++ ..-|. ...+++|...+.+... -.-..... -..+.++
T Consensus 99 F~~fF~~f~~vlyP~~~~l-hp~~~~~~~~~--~~~~--~~~~~--i~~~~~Wt~slfYv~a--ElwgsvvlSlLFW~fA 169 (491)
T PF03219_consen 99 FLGFFALFAFVLYPNRDIL-HPDAFADKLLA--ILPP--GFKGF--IAMFRNWTFSLFYVMA--ELWGSVVLSLLFWGFA 169 (491)
T ss_pred HHHHHHHHHHHHhhchhhc-CCCHHHHHhhh--hccc--hHHHH--HHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHH
Confidence 44444444331 110000 00000010000 0000 01111 1222333332222221 11112222 3468899
Q ss_pred hcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011514 400 SKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTA 435 (484)
Q Consensus 400 ~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~ 435 (484)
.|..+.++..+.+++.....++|.++++.+...+.+
T Consensus 170 N~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 170 NEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998888887777
No 298
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=84.10 E-value=4.9 Score=37.33 Aligned_cols=74 Identities=15% Similarity=0.085 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhhH
Q 011514 88 LTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAAR 165 (484)
Q Consensus 88 ~~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~ 165 (484)
.+++.+.-.+..+.++ .|..++.-+..|+.+ |..+....--+.+-.++++|..+++.....-++|..++..++-
T Consensus 326 Nl~ff~~~a~~~ftps---i~ivf~lI~~EGLlG-GasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lal 399 (409)
T KOG3880|consen 326 NLLFFLLQAWYWFTPS---IWIVFALILFEGLLG-GASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLAL 399 (409)
T ss_pred HHHHHHHHHHHHhccH---HHHHHHHHHHHhhcC-chHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhc
Confidence 3455555666777888 788888888999876 5555667777778788899999999999999999888777653
No 299
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=80.85 E-value=27 Score=31.37 Aligned_cols=23 Identities=17% Similarity=0.078 Sum_probs=15.6
Q ss_pred HHHhhhhhcchHHHHHhHHHHHH
Q 011514 303 MPLLAPILGEAKLLSLGLFAACI 325 (484)
Q Consensus 303 ~~~l~~~~g~~~~~~~~~~~~~~ 325 (484)
+..++.|+..|++.+++..++.+
T Consensus 260 Gk~lAskIS~rtVt~~ggi~Fi~ 282 (294)
T KOG2881|consen 260 GKYLASKISVRTVTLIGGILFII 282 (294)
T ss_pred hHHHhhhheeEEEEEecchhHHH
Confidence 35678888888877666555443
No 300
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=76.03 E-value=26 Score=34.14 Aligned_cols=127 Identities=12% Similarity=0.160 Sum_probs=81.3
Q ss_pred HhhHHHHHHHHhCCCCCCchhHHHHHHHHHHH-HHHHHHHHHhhhhhcccccCchhHhHHHHHHHHHHHHHHH-------
Q 011514 28 VPAITDVTMMALCPGLDECSLAIYLSGFQQAI-IGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILA------- 99 (484)
Q Consensus 28 ~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~-~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~i~~~~~~------- 99 (484)
..+.|-+..+.. ++...+.+..-++..+ +++...+|.+.+.++-++= ||... +..++..+..-++.
T Consensus 263 LsiFPg~~~~~~----~~~~~~~~y~~~~~~l~fN~~d~vG~~~a~~~~~~~-~r~l~-i~v~lR~lfiPlF~~cn~~~~ 336 (406)
T KOG1479|consen 263 LSIFPGFCSEVK----SSGLLGDWYALLLVFLSFNVFDLIGSILAALLTWPD-PRKLT-IPVLLRLLFIPLFLLCNYPPL 336 (406)
T ss_pred eEecchhhcccc----cCcccchhhHHHHHHHHhHHHHHhhhhhhhcccCCC-Cceeh-HHHHHHHHHHHHHHHhccCCC
Confidence 345666655432 1112234455666777 9999999877777766543 34333 33333333322222
Q ss_pred --hccchhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhHHHHhh
Q 011514 100 --YRRSISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVCGTLAA 164 (484)
Q Consensus 100 --~~~~~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~ 164 (484)
+-++ -++....-.+.|+ ..|-.....+.+..+..|++++..+-.+.......|...|..++
T Consensus 337 ~v~~~~---~~~~~~l~~~lgl-snGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s 399 (406)
T KOG1479|consen 337 PVVFES---DGWFIFLMSLLGL-SNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLS 399 (406)
T ss_pred CceecC---chHHHHHHHHHHh-ccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 1233 4667788888996 45888888999999999999988888888888777877776654
No 301
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=75.87 E-value=24 Score=35.38 Aligned_cols=83 Identities=14% Similarity=0.119 Sum_probs=46.5
Q ss_pred HHHHHHHHHHhchhhhhHHHHHHHHhh--hcCcChhhHHHHH--HHHHHHHHHHHHHHHHHhhhhhcchHHHHH-hHHHH
Q 011514 249 SQAAVVAFFSGLSEGGMQASFLYFLKA--QFHFNKNQFADLM--LIAGLAGTISQLLFMPLLAPILGEAKLLSL-GLFAA 323 (484)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~-~~~~~ 323 (484)
..+.+.++++....+......|..+++ + +.+-.+.|.+. +...-.=.+-++++=...++|+||||.-++ ...+.
T Consensus 3 ~lL~~LY~lQGiP~GL~~gsiPflL~~~~~-~~sy~q~~~fSla~~PfSlKlLWaPiVDs~y~~~~GRRKSWiiP~Q~l~ 81 (544)
T PF13000_consen 3 ALLVLLYFLQGIPLGLAFGSIPFLLQSMAK-KVSYSQQAIFSLASYPFSLKLLWAPIVDSVYSKRIGRRKSWIIPIQYLS 81 (544)
T ss_pred eHHHHHHHHcCcccccccccchhhhccccC-CCChhHheeeeeeechhHHHHhhhhhhhhhcccccCCcchhhhHHHHHH
Confidence 345666777777777666788998888 3 45555544321 111112233343444455668999886443 44555
Q ss_pred HHHHHHHhh
Q 011514 324 CINMFICSI 332 (484)
Q Consensus 324 ~~~~~~~~~ 332 (484)
++.++.++.
T Consensus 82 g~~m~~l~~ 90 (544)
T PF13000_consen 82 GILMLYLSY 90 (544)
T ss_pred HHHHHHHHh
Confidence 555555443
No 302
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=71.50 E-value=36 Score=25.94 Aligned_cols=39 Identities=18% Similarity=0.132 Sum_probs=31.6
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCc
Q 011514 405 PNEQGKAQGCISGISSFANIVSPLIFSPLTALFLSKGAPF 444 (484)
Q Consensus 405 ~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~~~~~~~~ 444 (484)
++.++.+.++--....+++++-....|++.|++ -...||
T Consensus 37 ~s~k~~~~a~klssefIsGilVGa~iG~llD~~-agTsPw 75 (116)
T COG5336 37 ESIKGYAQAFKLSSEFISGILVGAGIGWLLDKF-AGTSPW 75 (116)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHh-cCCCcH
Confidence 456788888888888899999999999999998 444555
No 303
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=68.97 E-value=1.9 Score=40.80 Aligned_cols=149 Identities=16% Similarity=0.179 Sum_probs=3.5
Q ss_pred HHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHH-HHHHHHHHHHHHHHhhhhhcccc-cCchhHhHH
Q 011514 9 TLSHLFVTVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSG-FQQAIIGLGTLVMMPVIGNLSDQ-YGRKAMLTL 86 (484)
Q Consensus 9 ~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g-~~~s~~~l~~~~~~~~~G~l~Dr-~Grk~~l~~ 86 (484)
..+...+..++..+..-...|.+..-.+.. ..++ ...++.- ....+++++-.+|....++.-=+ ..+|... .
T Consensus 144 ~i~~~~~~i~~~f~vTl~~FP~it~~v~s~---~~~~--~~~~f~pv~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~-~ 217 (309)
T PF01733_consen 144 KIWPYALSIFLVFFVTLSVFPGITSAVQSS---NNPD--WSSYFVPVVLFLLFNLGDFIGRFLASWPRWPGPSPRWLW-I 217 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHhheeeeccceeeeeecc---ccCC--CccHHHHHHHHHHHHHHHHhcchhcceeEecccccccHH-H
Confidence 344555555555555555556553322221 0111 1112222 45678899999888876653211 0234433 3
Q ss_pred HHHHHHHH---HHHHHhccc-------hhhHHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhH
Q 011514 87 PLTLSIIP---LAILAYRRS-------ISFFYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSAS 156 (484)
Q Consensus 87 ~~~~~~i~---~~~~~~~~~-------~~~~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g 156 (484)
..+...+. .+++-.-++ ...-+..++.-++.|+ ..|-.....+.+..+..++++|..+-.+......+|
T Consensus 218 ~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~-TNGyl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~G 296 (309)
T PF01733_consen 218 LSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGF-TNGYLSTLAMMYAPKSVSPEERELAGSVMSFFLSFG 296 (309)
T ss_dssp --------------------------------------------------HHHH--------------------------
T ss_pred HHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHH-ccchhhhceeeeCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 33322222 222211111 0113566777888896 447777888999999999999999988888888888
Q ss_pred HhHHHHhh
Q 011514 157 FVCGTLAA 164 (484)
Q Consensus 157 ~~ig~~l~ 164 (484)
..+|..++
T Consensus 297 l~~Gs~ls 304 (309)
T PF01733_consen 297 LFIGSVLS 304 (309)
T ss_dssp --------
T ss_pred HHHHHHHH
Confidence 88887655
No 304
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=68.83 E-value=1.4e+02 Score=30.54 Aligned_cols=23 Identities=17% Similarity=0.216 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhcc
Q 011514 289 LIAGLAGTISQLLFMPLLAPILGE 312 (484)
Q Consensus 289 ~~~~~~~~~~~~~~~~~l~~~~g~ 312 (484)
..+.+.+.+++ ..++++-+.++.
T Consensus 304 ~~y~~~~~iaG-y~S~~~yk~~~g 326 (521)
T PF02990_consen 304 ILYALTSFIAG-YVSARLYKSFGG 326 (521)
T ss_pred HHHHHHhhHHH-HHHHHHHHHcCC
Confidence 34444444444 555666665553
No 305
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=65.95 E-value=73 Score=30.22 Aligned_cols=28 Identities=36% Similarity=0.589 Sum_probs=20.0
Q ss_pred HHHHHHHHHhhhhhcchHHHHHhHHHHHH
Q 011514 297 ISQLLFMPLLAPILGEAKLLSLGLFAACI 325 (484)
Q Consensus 297 ~~~~~~~~~l~~~~g~~~~~~~~~~~~~~ 325 (484)
... ++.+.+.+++|.|+.+.++......
T Consensus 73 ~s~-m~~~~~Ir~~g~K~tm~lav~~Y~l 100 (390)
T KOG3097|consen 73 DSS-MFMPLLIRFLGTKWTMVLAVFPYAL 100 (390)
T ss_pred HHH-HHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 444 4446888999999998777666544
No 306
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=65.36 E-value=23 Score=26.98 Aligned_cols=41 Identities=20% Similarity=0.237 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhccccc-CchhHhHHHHHH
Q 011514 50 IYLSGFQQAIIGLGTLVMMPVIGNLSDQY-GRKAMLTLPLTL 90 (484)
Q Consensus 50 ~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~-Grk~~l~~~~~~ 90 (484)
.+..++-.+.-.++..+.....|++.||| |-++..++..++
T Consensus 41 ~~~~a~klssefIsGilVGa~iG~llD~~agTsPwglIv~ll 82 (116)
T COG5336 41 GYAQAFKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLL 82 (116)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 34445666667777777788889999997 556554444333
No 307
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=54.00 E-value=2.5e+02 Score=28.38 Aligned_cols=43 Identities=12% Similarity=-0.019 Sum_probs=36.3
Q ss_pred HHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 011514 394 SFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLTAL 436 (484)
Q Consensus 394 ~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~ 436 (484)
..+..+.|....++..|.+++.+...+++..++..+..++.++
T Consensus 168 lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~ 210 (509)
T COG3202 168 LFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKH 210 (509)
T ss_pred HHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 5667888999889999999999999998888888887777664
No 308
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=51.64 E-value=60 Score=31.12 Aligned_cols=98 Identities=21% Similarity=0.163 Sum_probs=73.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhcccccCchh--HhHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHhhhhccchhhHh
Q 011514 51 YLSGFQQAIIGLGTLVMMPVIGNLSDQYGRKA--MLTLPLTLSIIPLAILAYRRSISFFYAYYALRTLTAMVCEGSINCL 128 (484)
Q Consensus 51 ~~~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~--~l~~~~~~~~i~~~~~~~~~~~~~~~~l~~~r~l~G~~~~g~~~~~ 128 (484)
..-|..-++..+..+++.+..|.+--++.|.. .+..+.+..+...+++..+++ .|..+++.++... .-....+.
T Consensus 271 vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~---Iw~~Ya~yvlfr~-~y~l~iti 346 (433)
T KOG3810|consen 271 VYNGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQH---IWVCYAGYVLFRV-IYQLTITI 346 (433)
T ss_pred hhcCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccc---eehhhhhHHHHHh-hHhhhhhH
Confidence 35588888888999999999999988887753 444566666667777788888 7777777777663 33555567
Q ss_pred hhHHHhhcCCccchhHHHHHHHHH
Q 011514 129 ALAYVADNISERQRASAFGILLGV 152 (484)
Q Consensus 129 ~~~~i~~~~~~~~r~~~~~~~~~~ 152 (484)
+..-+++..++|.-|..+|+....
T Consensus 347 A~~~iA~nL~~e~~gLvFGiNTFv 370 (433)
T KOG3810|consen 347 ATFQIARNLSSELFGLVFGINTFV 370 (433)
T ss_pred HHHHHHHhhhhhhheeeeehHHHH
Confidence 888888888888888888876654
No 309
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=50.91 E-value=2.5e+02 Score=27.45 Aligned_cols=73 Identities=10% Similarity=-0.068 Sum_probs=43.4
Q ss_pred HHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHH
Q 011514 249 SQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFA 322 (484)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~ 322 (484)
..+.+.+++.....-........|+.+..|-+-..++..-..-+....+...++ |...|+..|.|++...+.+
T Consensus 30 i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~iv-Gq~vDg~sr~Kvi~~~L~l 102 (503)
T KOG2601|consen 30 IFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIV-GQWVDGMSRVKVIQTWLLL 102 (503)
T ss_pred ehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHH-HHHhcchhHHHHHHHHHhh
Confidence 344555566555555566666777777655444444444444444445555344 7778899998887766554
No 310
>TIGR02840 spore_YtaF putative sporulation protein YtaF. This protein family was identified, at the time of the publication of the Carboxydothermus hydrogenoformans genome, as having a phylogenetic profile that exactly matches the subset of the Firmicutes capable of forming endospores. The species include Bacillus anthracis, Clostridium tetani, Thermoanaerobacter tengcongensis, Geobacillus kaustophilus, etc. This protein, previously named YtaF, is therefore a putative sporulation protein.
Probab=43.70 E-value=2.3e+02 Score=24.91 Aligned_cols=48 Identities=10% Similarity=0.101 Sum_probs=24.5
Q ss_pred CcChhhHHHHHHHHHHHHHHHHHHHHHHhhhh--hcchHHHHHhHHHHHHH
Q 011514 278 HFNKNQFADLMLIAGLAGTISQLLFMPLLAPI--LGEAKLLSLGLFAACIN 326 (484)
Q Consensus 278 g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~g~~~~~~~~~~~~~~~ 326 (484)
|.+.....................++.++.++ .+++. +.-|.++..++
T Consensus 153 g~~~~~~~~~igivs~i~~~~G~~lG~~~~~~~~~g~~a-~igGliLI~iG 202 (206)
T TIGR02840 153 GLNPLATSILVAVMSFIFVSLGLFLGKKISKKSIIGKFS-FLSGILLILLG 202 (206)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchH-HHHHHHHHHHH
Confidence 55555545555555555555543454445554 35554 55555555544
No 311
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=41.60 E-value=3.3e+02 Score=26.27 Aligned_cols=55 Identities=13% Similarity=0.167 Sum_probs=31.6
Q ss_pred hhHHHHHHHhhhhhhhHHHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 011514 378 PYATTAFSVLVVFATPSFRSIVSKQVGPNEQGKAQGCISGISSFANIVSPLIFSPLT 434 (484)
Q Consensus 378 ~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~ 434 (484)
.....++|.-.++-.|....+.++... +.....+.....-++|...+.+...++.
T Consensus 109 y~lt~vIG~LVG~EiPL~mrml~~r~a--~~k~~~s~vl~~DYLGal~~gLl~p~ll 163 (508)
T COG4262 109 YALTAVIGVLVGAEIPLLMRMLQRRQA--KAKDLGSRVLTLDYLGALAGGLLWPFLL 163 (508)
T ss_pred HHHHHHHHHHHhcchHHHHHHHHHHHH--HHHhhhhhhhhhHhhhhhhHHHHHHHHH
Confidence 344557788888888888888876221 1112222333346666666666555543
No 312
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=37.71 E-value=85 Score=24.02 Aligned_cols=51 Identities=12% Similarity=0.075 Sum_probs=39.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhhc
Q 011514 282 NQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSIS 333 (484)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 333 (484)
...|-.+..++...++.+ ++-++..|+..+.+.=.+|..++.++..++.+.
T Consensus 54 ~~fGRvYAAYGGvfI~~S-l~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVAS-LLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred ccchhHHHHhhhhHHHHH-HHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 455888899999999998 555999999988887778887777776665544
No 313
>PF06783 UPF0239: Uncharacterised protein family (UPF0239); InterPro: IPR009621 This is a group of transmembrane proteins of unknown function.; GO: 0016021 integral to membrane
Probab=37.06 E-value=86 Score=22.80 Aligned_cols=20 Identities=5% Similarity=0.120 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 011514 170 TSAFQAATIVSMLAAAYMRV 189 (484)
Q Consensus 170 ~~~f~~~~~~~~i~~~~~~~ 189 (484)
|+-.++.+++-+++++.+.+
T Consensus 23 RYGLf~GAIFQliCilAiI~ 42 (85)
T PF06783_consen 23 RYGLFVGAIFQLICILAIIL 42 (85)
T ss_pred HHHHHHHHHHHHHHHHheee
Confidence 56666777677776655544
No 314
>PRK02237 hypothetical protein; Provisional
Probab=33.94 E-value=1.4e+02 Score=22.97 Aligned_cols=50 Identities=10% Similarity=0.046 Sum_probs=39.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhhc
Q 011514 283 QFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSIS 333 (484)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 333 (484)
..|-.+..++...++.+ ++-++..|+..+.+.=.+|..++.++..++.+.
T Consensus 57 ~~GRvYAAYGGvyI~~S-l~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~ 106 (109)
T PRK02237 57 AFGRVYAAYGGVYVAGS-LLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA 106 (109)
T ss_pred hhhhHHHHhhhHHHHHH-HHHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence 46888899999999998 555999999988777777877777776655443
No 315
>PRK09664 tryptophan permease TnaB; Provisional
Probab=31.08 E-value=5.4e+02 Score=25.53 Aligned_cols=19 Identities=16% Similarity=-0.150 Sum_probs=11.2
Q ss_pred HHHHHHhhhhhhhHHHHHH
Q 011514 381 TTAFSVLVVFATPSFRSIV 399 (484)
Q Consensus 381 ~~~~g~~~~~~~~~~~~~~ 399 (484)
..+..++.....|....+.
T Consensus 201 Vl~~SFgfh~iIPsl~~y~ 219 (415)
T PRK09664 201 VCLASFGFHGNIPSLIICY 219 (415)
T ss_pred HHHHhhhCCCcchHHHHHh
Confidence 3355666666666666654
No 316
>PRK13629 threonine/serine transporter TdcC; Provisional
Probab=30.90 E-value=5.6e+02 Score=25.66 Aligned_cols=32 Identities=13% Similarity=0.155 Sum_probs=25.2
Q ss_pred CccchhHHHHHHHHHHHhHHhHHHHhhHhhhh
Q 011514 138 SERQRASAFGILLGVLSASFVCGTLAARFLST 169 (484)
Q Consensus 138 ~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~ 169 (484)
.+++.+...++.+++.+.|.+.=|...+..|.
T Consensus 18 ~~~d~~W~l~l~GTAIGAGmLfLPI~~g~~Gf 49 (443)
T PRK13629 18 RKSDTTWTLGLFGTAIGAGVLFFPIRAGFGGL 49 (443)
T ss_pred ccccchHHHHHHHHHHhHHHHHHHHHHhcchH
Confidence 34567788899999999999998988876543
No 317
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=28.54 E-value=1.6e+02 Score=24.46 Aligned_cols=49 Identities=6% Similarity=0.017 Sum_probs=35.4
Q ss_pred HHHHHHHHHHhhhhccchhhHhhhHHHhhcCCccchhHHHHHHHHHHHhHHhH
Q 011514 107 FYAYYALRTLTAMVCEGSINCLALAYVADNISERQRASAFGILLGVLSASFVC 159 (484)
Q Consensus 107 ~~~l~~~r~l~G~~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~i 159 (484)
+..++..-.+.|+ |.. ...+..++-..++++-|..+|+-+.-.+++-+.
T Consensus 97 ~~~~~~S~~~Fg~---gll-GisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 97 WAVLLVSLVFFGL---GLL-GISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred hHHHHHHHHHHHH---HHH-hhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 3455555555553 233 467888999999999999999999888887554
No 318
>TIGR00814 stp serine transporter. The HAAAP family includes well characterized aromatic amino acid:H+ symport permeases and hydroxy amino acid permeases. This subfamily is specific for hydroxy amino acid transporters and includes the serine permease, SdaC, of E. coli, and the threonine permease, TdcC, of E. coli.
Probab=27.74 E-value=6e+02 Score=25.00 Aligned_cols=34 Identities=9% Similarity=0.048 Sum_probs=26.0
Q ss_pred CccchhHHHHHHHHHHHhHHhHHHHhhHhhhhHH
Q 011514 138 SERQRASAFGILLGVLSASFVCGTLAARFLSTTS 171 (484)
Q Consensus 138 ~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~ 171 (484)
.+++.+....+.+...+.|.+.-|...+.-||-.
T Consensus 2 ~~~d~~w~~~l~gt~IGaGiL~LP~~ag~~G~i~ 35 (397)
T TIGR00814 2 TKTDTGWMLGLYGTAIGAGVLFLPIQAGLGGLWV 35 (397)
T ss_pred CccchhHHHHHHHHHHHHHHHHHHHHHHhCHHHH
Confidence 3567778888888988999888888776666533
No 319
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=24.87 E-value=5.7e+02 Score=23.79 Aligned_cols=56 Identities=20% Similarity=0.207 Sum_probs=34.3
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHHhhccchhh
Q 011514 280 NKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFICSISWSAWV 338 (484)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (484)
...|++.-+-+..+..++.+.+ ++.||++|-..+.++....++.....-..+-+|.
T Consensus 97 ~~leaSLGY~InPL~~VllG~l---flkErls~~Q~iAV~lA~~GV~~~~~~~g~lpwv 152 (293)
T COG2962 97 HVLEASLGYFINPLVNVLLGRL---FLKERLSRLQWIAVGLAAAGVLIQTWLLGSLPWV 152 (293)
T ss_pred chhHHHhHHHHHHHHHHHHHHH---HHHhhccHHHHHHHHHHHHHHHHHHHHcCCCcHH
Confidence 3445566666666766666523 4678988877777766666665555544444443
No 320
>COG1288 Predicted membrane protein [Function unknown]
Probab=23.92 E-value=5.3e+02 Score=25.68 Aligned_cols=33 Identities=18% Similarity=0.204 Sum_probs=20.3
Q ss_pred HHHHHhcccCCCchhHHHHHHHHHHHHHHHHHHH
Q 011514 395 FRSIVSKQVGPNEQGKAQGCISGISSFANIVSPL 428 (484)
Q Consensus 395 ~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~gp~ 428 (484)
..+=++|.+. -.|..+.-.++....+.+.+.|.
T Consensus 406 ImAPLaD~vg-v~RqvvV~Afq~g~G~~n~I~PT 438 (481)
T COG1288 406 IMAPLADLVG-VPRQVVVLAFQLGDGFSNIIAPT 438 (481)
T ss_pred hhhhhHHhcC-CCHHHhhhhhhhcchhhheecCc
Confidence 3444456655 33556666677777777777765
No 321
>PRK11469 hypothetical protein; Provisional
Probab=23.86 E-value=4.7e+02 Score=22.52 Aligned_cols=53 Identities=19% Similarity=0.113 Sum_probs=31.6
Q ss_pred CcChhhHHHHHHHHHHHHHHHHHHHHHHhhhhhcchHHHHHhHHHHHHHHHHH
Q 011514 278 HFNKNQFADLMLIAGLAGTISQLLFMPLLAPILGEAKLLSLGLFAACINMFIC 330 (484)
Q Consensus 278 g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~ 330 (484)
|.+.....................++.++.+++++|.-+.-|.++..++.-.+
T Consensus 130 g~~~~~~~~~ig~~s~~~~~~G~~lG~~~g~~~g~~a~~lgG~iLI~iGi~il 182 (188)
T PRK11469 130 QVNIIATALAIGCATLIMSTLGMMVGRFIGSIIGKKAEILGGLVLIGIGVQIL 182 (188)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444555555555555554555666677777777777777777765544
No 322
>PF01988 VIT1: VIT family; InterPro: IPR008217 Proteins containing this entry have no known function and are predicted to be integral membrane proteins. They include the Ccc1 protein from Saccharomyces cerevisiae (Baker's yeast) (P47818 from SWISSPROT) that may have a role in regulating calcium levels [].
Probab=23.38 E-value=5.1e+02 Score=22.74 Aligned_cols=16 Identities=25% Similarity=0.509 Sum_probs=9.6
Q ss_pred chhhhhHHHHHHHHhh
Q 011514 260 LSEGGMQASFLYFLKA 275 (484)
Q Consensus 260 ~~~~~~~~~~~~~~~~ 275 (484)
+...+....+|+++..
T Consensus 142 f~lg~liPllp~~~~~ 157 (213)
T PF01988_consen 142 FILGGLIPLLPYFFLP 157 (213)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 3445566677776654
No 323
>PF04341 DUF485: Protein of unknown function, DUF485; InterPro: IPR007436 This family includes several putative integral membrane proteins.
Probab=23.27 E-value=3.1e+02 Score=20.26 Aligned_cols=50 Identities=2% Similarity=-0.148 Sum_probs=29.5
Q ss_pred cchhHHHHHHHHHHhchhhhhHHHHHHHHhhhcCcChhhHHHHHHHHHHH
Q 011514 245 SVTLSQAAVVAFFSGLSEGGMQASFLYFLKAQFHFNKNQFADLMLIAGLA 294 (484)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 294 (484)
++..+.+....+...+++.....+.|..+.....-+....|+......+.
T Consensus 15 ~r~~~~l~~i~l~~y~~~~ll~a~~p~~m~~~v~~G~~t~g~~~g~~~~~ 64 (91)
T PF04341_consen 15 RRLAWPLSAIFLVLYFGFVLLSAFAPELMATPVFPGSLTLGIVLGLGQIV 64 (91)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCHHHHcCcccCCCcCHHHHHHHHHHH
Confidence 34455556666666667777777777777665442344556655544443
No 324
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=23.24 E-value=2e+02 Score=24.72 Aligned_cols=22 Identities=18% Similarity=0.274 Sum_probs=16.9
Q ss_pred HHHHHHHHHHhhhhhcccccCc
Q 011514 59 IIGLGTLVMMPVIGNLSDQYGR 80 (484)
Q Consensus 59 ~~~l~~~~~~~~~G~l~Dr~Gr 80 (484)
-|-++..+.+.+.|++.||..+
T Consensus 90 GyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 90 GYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred hHHHHHHHHHHHHHHHHHhhhc
Confidence 3467777888888888888775
No 325
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=22.93 E-value=1.6e+02 Score=22.62 Aligned_cols=49 Identities=18% Similarity=0.131 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHHHHHHHHHHHhcc
Q 011514 54 GFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRR 102 (484)
Q Consensus 54 g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~i~~~~~~~~~ 102 (484)
|=..+.|.-.++..++.+++..|+.-+.+-=.++..+..++..+..+.+
T Consensus 57 GRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~P 105 (107)
T PF02694_consen 57 GRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAP 105 (107)
T ss_pred hhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecC
Confidence 6677888888899999999999999887777788887777776655443
No 326
>PRK02237 hypothetical protein; Provisional
Probab=22.13 E-value=2e+02 Score=22.19 Aligned_cols=50 Identities=12% Similarity=-0.001 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHHHHHHHHHHHhcc
Q 011514 53 SGFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIPLAILAYRR 102 (484)
Q Consensus 53 ~g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~i~~~~~~~~~ 102 (484)
.|=+.+.|.-.+++.++.+++..|+.-+-+-=.+|..+..++..+..+.+
T Consensus 58 ~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p 107 (109)
T PRK02237 58 FGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP 107 (109)
T ss_pred hhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence 36777888888899999999999998877777777777777776655443
No 327
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=21.53 E-value=4.7e+02 Score=21.73 Aligned_cols=33 Identities=15% Similarity=0.133 Sum_probs=25.5
Q ss_pred hHHHHHHhcccCCCchhHHHHHHHHHHHHHHHH
Q 011514 393 PSFRSIVSKQVGPNEQGKAQGCISGISSFANIV 425 (484)
Q Consensus 393 ~~~~~~~~~~~p~~~~g~~~g~~~~~~~lg~~~ 425 (484)
...+.+++..-++++.|+..|+-..-.+++...
T Consensus 113 GisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 113 GISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred hhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 345667777888888999999998888876544
No 328
>COG4125 Predicted membrane protein [Function unknown]
Probab=20.83 E-value=3.4e+02 Score=21.89 Aligned_cols=53 Identities=15% Similarity=0.083 Sum_probs=31.0
Q ss_pred HHHHHHHHHHhhHhhHHHHHHHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcccccC
Q 011514 16 TVFLWGFATMMVVPAITDVTMMALCPGLDECSLAIYLSGFQQAIIGLGTLVMMPVIGNLSDQYG 79 (484)
Q Consensus 16 ~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~g~~~s~~~l~~~~~~~~~G~l~Dr~G 79 (484)
...+..++..+..|....+. +.+..+.|-+.-.......+-..+...+-||.-
T Consensus 16 Al~FE~Ia~~I~ap~~A~L~-----------~~p~~~mG~l~i~~atvAm~WN~vyN~lFd~~~ 68 (149)
T COG4125 16 ALAFELIALMICAPVLALLM-----------GKPILHMGALTILSATVAMIWNFVYNLLFDRAE 68 (149)
T ss_pred HHHHHHHHHHHHHHHHHHHc-----------CCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44467777788888877765 223334455555555555555555666666543
No 329
>PF11511 RhodobacterPufX: Intrinsic membrane protein PufX; InterPro: IPR020169 PufX organises RC-LH1, the photosynthesis reaction centre-light harvesting complex 1 core complex of Rhodobacter sphaeroides []. It also facilitates the exchange of quinol for quinone between the reaction centre and cytochrome bc(1) complexes. In organic solvent, PufX contains two hydrophobic helices which are flanked by unstructured regions and connected by a helical bend [].; PDB: 2DW3_A 2ITA_A 2NRG_A.
Probab=20.75 E-value=2.8e+02 Score=19.22 Aligned_cols=31 Identities=10% Similarity=0.175 Sum_probs=16.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHcccCCCCCC
Q 011514 169 TTSAFQAATIVSMLAAAYMRVFLKDDVPNDD 199 (484)
Q Consensus 169 ~~~~f~~~~~~~~i~~~~~~~~lpe~~~~~~ 199 (484)
|-..+.+...+.++.+-.+-..+||..+..+
T Consensus 30 ~Aav~~~~~~~~l~~~~~iG~~LPe~s~~aP 60 (67)
T PF11511_consen 30 YAAVFFLGLWFLLVALYFIGLLLPERSRQAP 60 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSSTTTCSS-S
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCchhcccCC
Confidence 4444444444444555555567888655443
No 330
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=20.06 E-value=8.1e+02 Score=23.82 Aligned_cols=81 Identities=14% Similarity=0.077 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHHHhhhhhcccccCchhHhHHHHHHHHHH----HHHH-Hhccch-hhHHHHHHHHHHhhhhccchhhH
Q 011514 54 GFQQAIIGLGTLVMMPVIGNLSDQYGRKAMLTLPLTLSIIP----LAIL-AYRRSI-SFFYAYYALRTLTAMVCEGSINC 127 (484)
Q Consensus 54 g~~~s~~~l~~~~~~~~~G~l~Dr~Grk~~l~~~~~~~~i~----~~~~-~~~~~~-~~~~~l~~~r~l~G~~~~g~~~~ 127 (484)
+.+.+.|-.+..+++...-++.|.--.-+.+..-.++..++ .+++ .|+.+. ..-+.+++..++.|... |.-.|
T Consensus 46 S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~LV-G~EiP 124 (508)
T COG4262 46 SLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYALTAVIGVLV-GAEIP 124 (508)
T ss_pred HHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHHHHHHHHHHH-hcchH
Confidence 45666666666666666666666433332222222222111 1222 333321 22577888888888766 77778
Q ss_pred hhhHHHhh
Q 011514 128 LALAYVAD 135 (484)
Q Consensus 128 ~~~~~i~~ 135 (484)
..+.++..
T Consensus 125 L~mrml~~ 132 (508)
T COG4262 125 LLMRMLQR 132 (508)
T ss_pred HHHHHHHH
Confidence 88888776
Done!