BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011516
(484 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6CGU8|MCH1_YARLI Probable transporter MCH1 OS=Yarrowia lipolytica (strain CLIB 122 /
E 150) GN=MCH1 PE=3 SV=1
Length = 486
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 107/251 (42%), Gaps = 38/251 (15%)
Query: 211 RIAQLQARLFHAAAEGAVRVKRRRGPHRGEDFTLTQALIKADFWLIFFSLLLGSGSGLTV 270
R A+ A AE + H G TL + WL + G
Sbjct: 234 RTAESMASELRKKAEASTDCNCDGPGHEGA--TLKEFFTDKTAWLFLLCFVFIGGPFEMF 291
Query: 271 IDNLGQMSQSLGYDN-------THIFVSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAM 323
+N+G + ++ +N TH VS+ + ++ + R+ G+ SE + + RPV +
Sbjct: 292 QNNMGAILDTVTVENADSPSFSTH--VSLFATFSTVSRLVVGFSSEAM--ESHVSRPVLL 347
Query: 324 AVAQFVMAIGHIFLGMG----WPGAMY--VGTLLIGLGYGAHWAIVPAAASELFGLKKFG 377
+V V A H+ + G + A Y V T++ G YG+ + +VP ++++G+ G
Sbjct: 348 SVIALVAACIHLMVPSGIFTVFDNAKYFSVVTIVNGFSYGSSFTLVPTIVTKVWGIANLG 407
Query: 378 ALYNFLTLANPAGSLVFSGLIASYIYDHEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCE 437
++ LA GSL + GL+ + +YD +E + G SM +V C
Sbjct: 408 TIWGSFILALAVGSLGY-GLLFAKVYDAASE---------VGVG----SMSQV-----CS 448
Query: 438 GSICYFLTSMI 448
G CY LT +I
Sbjct: 449 GVHCYGLTFVI 459
>sp|Q4WVT3|MCH1_ASPFU Probable transporter mch1 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=mch1 PE=3
SV=1
Length = 619
Score = 40.8 bits (94), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 342 PGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASY 401
PG +V T LIGLGYG+ +++VP S ++G++ FG + + + AG+ ++ G+I S
Sbjct: 506 PGLSHVTTALIGLGYGSAFSLVPIIISVVWGVENFGTNWGIVAMVPAAGAAMW-GVIYSR 564
Query: 402 IYDHEAE 408
Y +
Sbjct: 565 GYQDATD 571
>sp|Q5AXV1|MCH1_EMENI Probable transporter mch1 OS=Emericella nidulans (strain FGSC A4 /
ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=mch1 PE=3
SV=2
Length = 615
Score = 40.4 bits (93), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 86/191 (45%), Gaps = 37/191 (19%)
Query: 254 WLIFFSLLLGSGSGLTVIDNLGQMSQSLGYDNTHIF-----------VSMISIWNFLGRV 302
W + L +G G ++NLG + Q+L D T I V++I++ + + R+
Sbjct: 379 WWLALGFFLVTGPGEAYLNNLGTIVQTLNLDTTAIVDSHPAGLPSTHVTIIALTSTIARL 438
Query: 303 GGGYFSEI----------IVRDYAYPRPV-----AMAVAQFVMAIGHIF----------L 337
G S++ + ++ A P P A++ F++ + L
Sbjct: 439 LTGSLSDLFAPTARRHFTVDQETAGPDPFTKQRPALSRLAFLIPSALLLSLGFLLLASPL 498
Query: 338 GMGWPGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGL 397
P ++ T L+GLGYG+ +++VP S ++G++ FG + + + AG+ ++ G+
Sbjct: 499 PTHHPELSHLTTALVGLGYGSIFSLVPIIISVVWGVENFGTNWGIVAMFPAAGAAMW-GV 557
Query: 398 IASYIYDHEAE 408
I S Y A+
Sbjct: 558 IYSRAYQSAAD 568
>sp|P37662|YHJX_ECOLI Inner membrane protein YhjX OS=Escherichia coli (strain K12)
GN=yhjX PE=1 SV=1
Length = 402
Score = 40.4 bits (93), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 74/165 (44%), Gaps = 15/165 (9%)
Query: 240 EDFTLTQALIKADFWLIFFSLLLGSGSGLTVIDNLGQMSQSLGYDN---THIFVSMISIW 296
+D+TL +++ K +W++ L SGL VI ++QSL + + V++ISI
Sbjct: 203 KDYTLAESMRKPQYWMLAVMFLTACMSGLYVIGVAKDIAQSLAHLDVVSAANAVTVISIA 262
Query: 297 NFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVMAIGHIFLGMGWPGAM--YVGTLLIGL 354
N GR+ G S+ I R + + Q + +G L A+ + +
Sbjct: 263 NLSGRLVLGILSDKI------ARIRVITIGQVISLVGMAALLFAPLNAVTFFAAIACVAF 316
Query: 355 GYGAHWAIVPAAASELFGL----KKFGALYNFLTLANPAGSLVFS 395
+G + P+ SE FGL K +G +Y + + GS++ S
Sbjct: 317 NFGGTITVFPSLVSEFFGLNNLAKNYGVIYLGFGIGSICGSIIAS 361
>sp|Q96TW9|MCH1_HANAN Probable transporter MCH1 OS=Hansenula anomala GN=MCH1 PE=3 SV=1
Length = 489
Score = 40.0 bits (92), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 72/155 (46%), Gaps = 6/155 (3%)
Query: 254 WLIFFSLLLGSGSGLTVIDNLGQMSQSLGYDNTHIF--VSMISIWNFLGRVGGGYFSEII 311
+++ FSLLL G I N+G + +++ N+ I V++ ++++ L R+ G S+ +
Sbjct: 265 YVLLFSLLLSIGPSEMYITNMGSLVKAIT-PNSLISDQVAIHAVFSTLSRLSLGALSDFL 323
Query: 312 VRDYAYPRPVAMAVAQFVMAIGHIFLGMGW--PGAMYVGTLLIGLGYGAHWAIVPAAASE 369
V +Y R + + IF+ Y+ + L G YG + + P
Sbjct: 324 VTNYQISRSWLLLSIIVLGFFTQIFIATSTFVKDQYYIISALSGFSYGGLFTLYPTVIFS 383
Query: 370 LFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYD 404
++G + FG+ + +A GS F G++ +YD
Sbjct: 384 IWGPEIFGSAWGSFMIAPAIGSTTF-GMVFGLVYD 417
>sp|Q4IM48|MCH1_GIBZE Probable transporter MCH1 OS=Gibberella zeae (strain PH-1 / ATCC
MYA-4620 / FGSC 9075 / NRRL 31084) GN=MCH1 PE=3 SV=1
Length = 572
Score = 36.2 bits (82), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 351 LIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDHEAEKQ 410
L+G GYGA +++ P + ++G++ F Y + + AGS F GL+ S Y + A K
Sbjct: 459 LVGAGYGAIFSLTPLMVTIIWGVENFATNYGLIGMLPAAGS-TFWGLVYSATYQNGANKS 517
Query: 411 H 411
Sbjct: 518 K 518
>sp|Q6CDN5|DBP6_YARLI ATP-dependent RNA helicase DBP6 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=DBP6 PE=3 SV=1
Length = 607
Score = 36.2 bits (82), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 191 EVEDEKPKDVDLLPASERRKRIAQLQARLFHAAAEGAVRVKRRRGPHRGEDFTLTQ 246
EV+DE+ + + L A ++RK+ Q A L A E A+ KR+R H GE+ + ++
Sbjct: 65 EVKDEEESEDENLTADQKRKK-KQEAANLAKRAEEKALERKRKREQHMGEEDSDSE 119
>sp|Q9P3K8|MCH1_NEUCR Probable transporter MCH1 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=mch-1
PE=3 SV=1
Length = 598
Score = 35.8 bits (81), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 54/135 (40%), Gaps = 18/135 (13%)
Query: 329 VMAIGHIFLGMGW----PGAMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLT 384
+++G L GW +V + L+G GYGA +++ P + ++G++ F + +
Sbjct: 460 TLSVGLATLASGWIQNHGERFWVASGLVGAGYGAVFSLTPIIITVIWGVENFATNWGIVA 519
Query: 385 LANPAGSLVFSGLIASYIYDHEAEKQHQPHHHLLNAGSIFTSMPRVDEPLKCEGSICYFL 444
+ PA F GL+ S +Y EK +E C GS CY
Sbjct: 520 MF-PALGATFWGLVYSAVYQSGVEKAASNGQG-------------GEEDQFCYGSECYAS 565
Query: 445 TSMIMSGLCIVAVIL 459
M+ VA L
Sbjct: 566 AFWAMAASVWVACGL 580
>sp|Q03795|YM30_YEAST Uncharacterized membrane protein YMR155W OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YMR155W PE=1
SV=1
Length = 547
Score = 33.5 bits (75), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/123 (20%), Positives = 53/123 (43%), Gaps = 13/123 (10%)
Query: 290 VSMISIWNFLGRVGGGYFSEIIVRDYAYPRPVAMAVAQFVM-----AIGHIFLGMGWPG- 343
V+++S+ +F GR+ G S+ +V+ + R + +A ++ I H F + P
Sbjct: 368 VTLLSLLSFCGRLSSGPISDFLVKKFKAQRLWNIVIASLLVFLASNKISHDFSSIEDPSL 427
Query: 344 -------AMYVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSG 396
+ V + + G +G + P+ ++ FG + L+ LT VF+
Sbjct: 428 RASKSFKNISVCSAIFGYSFGVLFGTFPSIVADRFGTNGYSTLWGVLTTGGVFSVSVFTD 487
Query: 397 LIA 399
++
Sbjct: 488 ILG 490
>sp|Q6FWD4|MCH1_CANGA Probable transporter MCH1 OS=Candida glabrata (strain ATCC 2001 /
CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=MCH1 PE=3
SV=1
Length = 489
Score = 33.5 bits (75), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 346 YVGTLLIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDH 405
Y+G ++ G+ YG + I P ++G K FG Y L +A GS S LI + +YD
Sbjct: 389 YIG-IMQGIAYGGLFTIYPTITLMVWGEKMFGTAYGTLMIAPALGS-ALSCLIYADVYDS 446
Query: 406 EAEKQ 410
E
Sbjct: 447 ECANS 451
>sp|Q07376|MCH1_YEAST Probable transporter MCH1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=MCH1 PE=1 SV=1
Length = 486
Score = 33.1 bits (74), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 351 LIGLGYGAHWAIVPAAASELFGLKKFGALYNFLTLANPAGSLVFSGLIASYIYDHEA 407
L+G+ YG + + P ++G + FG +Y L +A GS++F L A + YD
Sbjct: 386 LVGIVYGGLFTVYPTLVLLVWGERSFGTVYGSLLIAPAIGSMIFCMLYAKF-YDSRC 441
>sp|G2TRT7|YCYH_SCHPO Putative uncharacterized transmembrane protein C1235.17
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPCC1235.17 PE=4 SV=1
Length = 150
Score = 32.7 bits (73), Expect = 6.3, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 90 GHRQVRPSDSSSFTFIYSVCLLLAAYL-MGVMLVEDLVDLNHTVIIIFTVILFVLLFIPI 148
G + +D SS+ + SV L L Y+ +G M++ + H + + T+ + + + I
Sbjct: 35 GQNKEGNADKSSYFKVVSVILTLRGYVQLGYMVIHLVTHTLHCITLYITITHYTIYIVNI 94
Query: 149 VIPIILSFFLER 160
VI + L ++ER
Sbjct: 95 VIQLWLYRYIER 106
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.141 0.424
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 175,846,613
Number of Sequences: 539616
Number of extensions: 7476908
Number of successful extensions: 26094
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 26064
Number of HSP's gapped (non-prelim): 64
length of query: 484
length of database: 191,569,459
effective HSP length: 121
effective length of query: 363
effective length of database: 126,275,923
effective search space: 45838160049
effective search space used: 45838160049
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 63 (28.9 bits)