Citrus Sinensis ID: 011519
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 484 | 2.2.26 [Sep-21-2011] | |||||||
| Q9FHD7 | 487 | Probable serine/threonine | no | no | 0.993 | 0.987 | 0.760 | 0.0 | |
| Q944A7 | 512 | Probable serine/threonine | no | no | 0.915 | 0.865 | 0.627 | 1e-170 | |
| Q7XJT7 | 465 | Probable inactive recepto | no | no | 0.946 | 0.984 | 0.441 | 1e-114 | |
| Q06548 | 410 | Protein kinase APK1A, chl | no | no | 0.638 | 0.753 | 0.319 | 1e-38 | |
| Q8H186 | 389 | Probable receptor-like pr | no | no | 0.572 | 0.712 | 0.320 | 3e-37 | |
| P46573 | 412 | Protein kinase APK1B, chl | no | no | 0.572 | 0.672 | 0.327 | 1e-36 | |
| Q9SFT7 | 414 | Serine/threonine-protein | no | no | 0.574 | 0.671 | 0.347 | 2e-36 | |
| O48814 | 395 | Serine/threonine-protein | no | no | 0.605 | 0.741 | 0.314 | 4e-35 | |
| P43298 | 942 | Probable receptor protein | no | no | 0.570 | 0.292 | 0.319 | 1e-34 | |
| Q8GXZ3 | 410 | Serine/threonine-protein | no | no | 0.553 | 0.653 | 0.333 | 2e-34 |
| >sp|Q9FHD7|Y5126_ARATH Probable serine/threonine-protein kinase At5g41260 OS=Arabidopsis thaliana GN=At5g41260 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 784 bits (2025), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/485 (76%), Positives = 424/485 (87%), Gaps = 4/485 (0%)
Query: 1 MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMEN 60
MGCE SKLSA C SE G + P+ ++ E + +++P F E+SIET+R ATSGFA EN
Sbjct: 1 MGCEVSKLSALCCVSESGRSNPDVTGLDEEGRGESNDLPQFREFSIETIRNATSGFAAEN 60
Query: 61 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG 120
IVSEHGE+APNVVYKGKLENQ RIAVKRFNR +WPD+RQFLEEA+AVGQLRN R+ANLLG
Sbjct: 61 IVSEHGERAPNVVYKGKLENQRRIAVKRFNRKSWPDSRQFLEEAKAVGQLRNHRMANLLG 120
Query: 121 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
CC E +ERLL+AE+MPN+TLAKHLFHWE+QPMKWAMRLRVALHIA+ALEYCTSK RALYH
Sbjct: 121 CCYEDEERLLIAEFMPNETLAKHLFHWESQPMKWAMRLRVALHIAQALEYCTSKGRALYH 180
Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240
DLNAYR++FDDD NPRLSCFGLMKNSRDG+SYSTNLAFTPPEYLRTGRVTPESV+YSFGT
Sbjct: 181 DLNAYRVLFDDDANPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGT 240
Query: 241 LLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
LLLDLLSGKHIPPSHALDLIRDRNIQ L DS LEGQFSSD+GTEL+RLASRCLQYEPRER
Sbjct: 241 LLLDLLSGKHIPPSHALDLIRDRNIQMLMDSGLEGQFSSDDGTELIRLASRCLQYEPRER 300
Query: 301 PNPRSLVTALVTLQKDTEVPSHVLMGIPHGAAALPLSPLGDACLRMDLTAIHEILEKLGY 360
PNP+SLV+A++ LQKD E+ SH L+G+P+ A LSPLG+ACLR DLTAIHEI+EKLGY
Sbjct: 301 PNPKSLVSAMIPLQKDLEIASHQLLGVPNSATTTALSPLGEACLRSDLTAIHEIIEKLGY 360
Query: 361 KDDEGAATE----MWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAF 416
KDDEGA TE MWT QMQ+TL KKKGD AFRHKDF +IECY+QFI+VGTM SPT
Sbjct: 361 KDDEGATTELSFQMWTDQMQDTLVFKKKGDSAFRHKDFAKAIECYSQFIEVGTMGSPTVH 420
Query: 417 ARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASIL 476
AR+SL YLM+DMP+EALN+A QAQVISP WH+A+YLQA AL ALG+ENEA AL++ ++L
Sbjct: 421 ARQSLCYLMNDMPREALNNAMQAQVISPAWHIASYLQAVALSALGQENEAHTALKDGAML 480
Query: 477 ENKKS 481
E+K++
Sbjct: 481 ESKRN 485
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Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1 |
| >sp|Q944A7|Y4523_ARATH Probable serine/threonine-protein kinase At4g35230 OS=Arabidopsis thaliana GN=At4g35230 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 597 bits (1538), Expect = e-170, Method: Compositional matrix adjust.
Identities = 283/451 (62%), Positives = 352/451 (78%), Gaps = 8/451 (1%)
Query: 38 VPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDA 97
+P F E+S L+ AT+ F+ +NIVSE GEKAPN+VYKG+L+N+ IAVK+F + AWP+
Sbjct: 55 IPSFSEFSFADLKAATNNFSSDNIVSESGEKAPNLVYKGRLQNRRWIAVKKFTKMAWPEP 114
Query: 98 RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMR 157
+QF EEA VG+LR+ RLANL+G CC+GDERLLVAE+MPNDTLAKHLFHWE Q ++WAMR
Sbjct: 115 KQFAEEAWGVGKLRHNRLANLIGYCCDGDERLLVAEFMPNDTLAKHLFHWENQTIEWAMR 174
Query: 158 LRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA 217
LRV +IAEAL+YC+++ R LYHDLNAYR++FD+D +PRLSCFGLMKNSRDG+SYSTNLA
Sbjct: 175 LRVGYYIAEALDYCSTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSRDGKSYSTNLA 234
Query: 218 FTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQF 277
+TPPEYLR GRVTPESV YSFGT+LLDLLSGKHIPPSHALD+IR +NI L DS LEG+F
Sbjct: 235 YTPPEYLRNGRVTPESVTYSFGTVLLDLLSGKHIPPSHALDMIRGKNIILLMDSHLEGKF 294
Query: 278 SSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPSHVLMGIPHGAAA---- 333
S++E T +V LAS+CLQYEPRERPN + LV L LQ ++VPS+V++GI A
Sbjct: 295 STEEATVVVELASQCLQYEPRERPNTKDLVATLAPLQTKSDVPSYVMLGIKKQEEAPSTP 354
Query: 334 -LPLSPLGDACLRMDLTAIHEILEKLGYKDDEGA---ATEMWTGQMQETLNSKKKGDVAF 389
PLSPLG+AC RMDLTAIH+IL Y+DDEG + + WT QM++ L+++K+GD +F
Sbjct: 355 QRPLSPLGEACSRMDLTAIHQILVMTHYRDDEGTNELSFQEWTQQMKDMLDARKRGDQSF 414
Query: 390 RHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMA 449
R KDF+ +I+CY+QFIDVGTMVSPT F RRSL YL+ D P AL DA QAQ + P W A
Sbjct: 415 REKDFKTAIDCYSQFIDVGTMVSPTVFGRRSLCYLLCDQPDAALRDAMQAQCVYPDWPTA 474
Query: 450 AYLQAAALFALGKENEAQAALREASILENKK 480
Y+Q+ AL L +A L EA+ LE K+
Sbjct: 475 FYMQSVALAKLNMNTDAADMLNEAAQLEEKR 505
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q7XJT7|SSP_ARATH Probable inactive receptor-like kinase SSP OS=Arabidopsis thaliana GN=SSP PE=1 SV=1 | Back alignment and function description |
|---|
Score = 411 bits (1057), Expect = e-114, Method: Compositional matrix adjust.
Identities = 215/487 (44%), Positives = 312/487 (64%), Gaps = 29/487 (5%)
Query: 1 MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMEN 60
MGC C LS S D +E + G P ++S L+TAT+ F+ EN
Sbjct: 1 MGC-CYSLS-----STVDPVQDHTTDASSEPRNGGGEDPPLTKFSFSALKTATNHFSPEN 54
Query: 61 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG 120
IVS+ + +VV+KG+L+N +A+KRFN AW D + FLEEA+ VG+LR++RL NL+G
Sbjct: 55 IVSD---QTSDVVFKGRLQNGGFVAIKRFNNMAWSDPKLFLEEAQRVGKLRHKRLVNLIG 111
Query: 121 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
CC+GD+R LVA++M NDTLAK LF + Q M W++RLRVA +AEAL+YC + A Y+
Sbjct: 112 YCCDGDKRFLVADFMANDTLAKRLFQRKYQTMDWSIRLRVAYFVAEALDYCNTAGFASYN 171
Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240
+L+AY+++FD+D + LSCFGLMK + + + TG V PE+V+Y FGT
Sbjct: 172 NLSAYKVLFDEDGDACLSCFGLMKEINNDQ-------------ITTGSVNPENVIYRFGT 218
Query: 241 LLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
+L++LLSGK IPPSHA ++I +N+ L D L+G+FS DE + +LAS+CL+YE +E
Sbjct: 219 VLVNLLSGKQIPPSHAPEMIHRKNVFKLMDPYLKGKFSIDEANVVYKLASQCLKYEGQES 278
Query: 301 PNPRSLVTALVTLQKDTEVPSHVLMGIPH----GAAALPLSPLGDACLRMDLTAIHEILE 356
PN + +V L TLQ TE PS+ ++ + + +++ LSPLG+ACLRMDL +IH IL
Sbjct: 279 PNTKEIVATLETLQTRTEAPSYEVVEMTNQEKDASSSSNLSPLGEACLRMDLASIHSILV 338
Query: 357 KLGYKDDEGA---ATEMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSP 413
GY DD+ + E W +++E + ++ GD AF +DF+ +I CY+QF++ ++V P
Sbjct: 339 LAGYDDDKDIIELSFEEWIQEVKELQDVRRNGDRAFVEQDFKTAIACYSQFVEERSLVYP 398
Query: 414 TAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREA 473
+ +ARRSLSYL D P++AL D AQ + P W A YLQ+ AL L ++ L+EA
Sbjct: 399 SVYARRSLSYLFCDEPEKALLDGMHAQGVFPDWPTAFYLQSVALAKLDMNTDSADTLKEA 458
Query: 474 SILENKK 480
++LE KK
Sbjct: 459 ALLEVKK 465
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Probable inactive protein kinase that activates the YODA MAP kinase cascade, regulating the asymmetric first division, and thus embryo polarity. Acts as an adapter at the plasma membrane, possibly recruiting an activator. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q06548|APK1A_ARATH Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1 | Back alignment and function description |
|---|
Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 111/347 (31%), Positives = 168/347 (48%), Gaps = 38/347 (10%)
Query: 3 CECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDN----VPVFCEYSIETLRTATSGFAM 58
E S S + G +A V P + P +S L++AT F
Sbjct: 11 AESSGASTKYDAKDIGSLGSKASSVSVRPSPRTEGEILQSPNLKSFSFAELKSATRNFRP 70
Query: 59 ENIVSEHGEKAPNVVYKGKLENQ----------FRIAVKRFNRSAWPDARQFLEEARAVG 108
++++ GE V+KG ++ + IAVK+ N+ W +++L E +G
Sbjct: 71 DSVL---GEGGFGCVFKGWIDEKSLTASRPGTGLVIAVKKLNQDGWQGHQEWLAEVNYLG 127
Query: 109 QLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFH--WETQPMKWAMRLRVALHIAE 166
Q +R L L+G C E + RLLV E+MP +L HLF QP+ W +RL+VAL A+
Sbjct: 128 QFSHRHLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGLYFQPLSWKLRLKVALGAAK 187
Query: 167 ALEYCTSKE-RALYHDLNAYRIVFDDDVNPRLSCFGLMKNS--RDGRSYSTNL----AFT 219
L + S E R +Y D I+ D + N +LS FGL K+ D ST + +
Sbjct: 188 GLAFLHSSETRVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPIGDKSHVSTRVMGTHGYA 247
Query: 220 PPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP----PSHALD--------LIRDRNIQT 267
PEYL TG +T +S +YSFG +LL+LLSG+ PS + L+ R I
Sbjct: 248 APEYLATGHLTTKSDVYSFGVVLLELLSGRRAVDKNRPSGERNLVEWAKPYLVNKRKIFR 307
Query: 268 LTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQ 314
+ D+ L+ Q+S +E ++ L+ RCL E + RPN +V+ L +Q
Sbjct: 308 VIDNRLQDQYSMEEACKVATLSLRCLTTEIKLRPNMSEVVSHLEHIQ 354
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Possible bi-functional kinase. In vitro, it exhibits serine/threonine activity. In vivo, can phosphorylate tyrosine residues of limited substrates. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q8H186|Y3545_ARATH Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 156 bits (395), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 100/312 (32%), Positives = 159/312 (50%), Gaps = 35/312 (11%)
Query: 44 YSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLE----------NQFRIAVKRFNRSA 93
+S L+ AT F +++V GE V++G L+ + IAVKR N
Sbjct: 49 FSFNELKLATRNFRSDSVV---GEGGFGCVFRGWLDETTLTPTKSSSGLVIAVKRLNPDG 105
Query: 94 WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLF---HWETQ 150
+ R++L E +GQL + L L+G C E ++RLLV E+M +L HLF + + +
Sbjct: 106 FQGHREWLTEINYLGQLSHPNLVKLIGYCLEDEQRLLVYEFMHKGSLENHLFANGNKDFK 165
Query: 151 PMKWAMRLRVALHIAEALEYCTSKE-RALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 209
P+ W +R++VAL A+ L + S + +Y D+ A I+ D D N +LS FGL ++ G
Sbjct: 166 PLSWILRIKVALDAAKGLAFLHSDPVKVIYRDIKASNILLDSDFNAKLSDFGLARDGPMG 225
Query: 210 -RSYST-----NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGK----HIPPSHALDL 259
+SY + + PEY+ TG + S +YSFG +LL+LL G+ H P+ +L
Sbjct: 226 EQSYVSTRVMGTFGYAAPEYVSTGHLNARSDVYSFGVVLLELLCGRQALDHNRPAKEQNL 285
Query: 260 I--------RDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311
+ R + + D+ L Q+ + L +A +CL +EP+ RP +V ALV
Sbjct: 286 VDWARPYLTSRRKVLLIVDTRLNSQYKPEGAVRLASIAVQCLSFEPKSRPTMDQVVRALV 345
Query: 312 TLQKDTEVPSHV 323
LQ P++V
Sbjct: 346 QLQDSVVKPANV 357
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Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|P46573|APK1B_ARATH Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2 | Back alignment and function description |
|---|
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 163/311 (52%), Gaps = 34/311 (10%)
Query: 39 PVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQ----------FRIAVKR 88
P ++ L+ AT F ++++ E G + V+KG ++ Q IAVK+
Sbjct: 52 PNLKSFTFAELKAATRNFRPDSVLGEGGFGS---VFKGWIDEQTLTASKPGTGVVIAVKK 108
Query: 89 FNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWE 148
N+ W +++L E +GQ + L L+G C E + RLLV E+MP +L HLF
Sbjct: 109 LNQDGWQGHQEWLAEVNYLGQFSHPNLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRG 168
Query: 149 T--QPMKWAMRLRVALHIAEALEYCTSKERA-LYHDLNAYRIVFDDDVNPRLSCFGLMKN 205
+ QP+ W +RL+VAL A+ L + + E + +Y D I+ D + N +LS FGL K+
Sbjct: 169 SYFQPLSWTLRLKVALGAAKGLAFLHNAETSVIYRDFKTSNILLDSEYNAKLSDFGLAKD 228
Query: 206 --SRDGRSYSTNL----AFTPPEYLRTGRVTPESVMYSFGTLLLDLLSG-----KHIPPS 254
+ D ST + + PEYL TG +T +S +YS+G +LL++LSG K+ PP
Sbjct: 229 GPTGDKSHVSTRIMGTYGYAAPEYLATGHLTTKSDVYSYGVVLLEVLSGRRAVDKNRPPG 288
Query: 255 H------ALDLIRD-RNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLV 307
A L+ + R + + D+ L+ Q+S +E ++ LA RCL +E + RPN +V
Sbjct: 289 EQKLVEWARPLLANKRKLFRVIDNRLQDQYSMEEACKVATLALRCLTFEIKLRPNMNEVV 348
Query: 308 TALVTLQKDTE 318
+ L +Q E
Sbjct: 349 SHLEHIQTLNE 359
|
Possible bi-functional kinase. In vitro, it exhibits serine/threonine activity. In vivo, can phosphorylate tyrosine residues of limited substrates. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9SFT7|Y3707_ARATH Serine/threonine-protein kinase At3g07070 OS=Arabidopsis thaliana GN=At3g07070 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 153 bits (387), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/314 (34%), Positives = 156/314 (49%), Gaps = 36/314 (11%)
Query: 25 QDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRI 84
Q+ N+E V N +S L TAT F E ++ GE VYKGKLE I
Sbjct: 48 QNKNNDEDKEVTNNIAAQTFSFRELATATKNFRQECLI---GEGGFGRVYKGKLEKTGMI 104
Query: 85 -AVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKH 143
AVK+ +R+ ++F+ E + L ++ L NL+G C +GD+RLLV EYM +L H
Sbjct: 105 VAVKQLDRNGLQGNKEFIVEVLMLSLLHHKHLVNLIGYCADGDQRLLVYEYMSRGSLEDH 164
Query: 144 LFHW--ETQPMKWAMRLRVALHIAEALEYCTSKER--ALYHDLNAYRIVFDDDVNPRLSC 199
L + P+ W R+R+AL A LEY K +Y DL A I+ D + N +LS
Sbjct: 165 LLDLTPDQIPLDWDTRIRIALGAAMGLEYLHDKANPPVIYRDLKAANILLDGEFNAKLSD 224
Query: 200 FGLMKNS--RDGRSYSTNL----AFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPP 253
FGL K D + S+ + + PEY RTG++T +S +YSFG +LL+L++G+ +
Sbjct: 225 FGLAKLGPVGDKQHVSSRVMGTYGYCAPEYQRTGQLTTKSDVYSFGVVLLELITGRRV-- 282
Query: 254 SHALDLIRDRNIQTLT-----------------DSCLEGQFSSDEGTELVRLASRCLQYE 296
+D R ++ Q L D LEG F + V +A+ CLQ E
Sbjct: 283 ---IDTTRPKDEQNLVTWAQPVFKEPSRFPELADPSLEGVFPEKALNQAVAVAAMCLQEE 339
Query: 297 PRERPNPRSLVTAL 310
RP +VTAL
Sbjct: 340 ATVRPLMSDVVTAL 353
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O48814|BIK1_ARATH Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 149 bits (377), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 104/331 (31%), Positives = 163/331 (49%), Gaps = 38/331 (11%)
Query: 24 AQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQ-- 81
AQ E E + + PV ++ L+ AT F ++++ GE V+KG L+
Sbjct: 39 AQKTEGEI---LSSTPV-KSFTFNELKLATRNFRPDSVI---GEGGFGCVFKGWLDESTL 91
Query: 82 --------FRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133
IAVK+ N+ + R++L E +GQL + L L+G C E + RLLV E
Sbjct: 92 TPTKPGTGLVIAVKKLNQEGFQGHREWLTEINYLGQLSHPNLVKLIGYCLEDEHRLLVYE 151
Query: 134 YMPNDTLAKHLFHWET--QPMKWAMRLRVALHIAEALEYCTSKE-RALYHDLNAYRIVFD 190
+M +L HLF +P+ W +R+ VAL A+ L + S + +Y D+ A I+ D
Sbjct: 152 FMQKGSLENHLFRRGAYFKPLPWFLRVNVALDAAKGLAFLHSDPVKVIYRDIKASNILLD 211
Query: 191 DDVNPRLSCFGLMKNSRDGR-SYST-----NLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
D N +LS FGL ++ G SY + + PEY+ +G + S +YSFG LLL+
Sbjct: 212 ADYNAKLSDFGLARDGPMGDLSYVSTRVMGTYGYAAPEYMSSGHLNARSDVYSFGVLLLE 271
Query: 245 LLSGK----HIPPSHALDLI--------RDRNIQTLTDSCLEGQFSSDEGTELVRLASRC 292
+LSGK H P+ +L+ R + + D+ L+ Q+ +E + +A +C
Sbjct: 272 ILSGKRALDHNRPAKEENLVDWARPYLTSKRKVLLIVDNRLDTQYLPEEAVRMASVAVQC 331
Query: 293 LQYEPRERPNPRSLVTALVTLQKDTEVPSHV 323
L +EP+ RP +V AL LQ + PS
Sbjct: 332 LSFEPKSRPTMDQVVRALQQLQDNLGKPSQT 362
|
Required to activate the resistance responses to necrotrophic pathogens. Phosphorylates FLS2 and BAK1. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|P43298|TMK1_ARATH Probable receptor protein kinase TMK1 OS=Arabidopsis thaliana GN=TMK1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/316 (31%), Positives = 169/316 (53%), Gaps = 40/316 (12%)
Query: 45 SIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRS--AWPDARQFLE 102
SI+ LR+ T+ F+ +NI+ G VVYKG+L + +IAVKR A +F
Sbjct: 577 SIQVLRSVTNNFSSDNIL---GSGGFGVVYKGELHDGTKIAVKRMENGVIAGKGFAEFKS 633
Query: 103 EARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWE---TQPMKWAMRLR 159
E + ++R+R L LLG C +G+E+LLV EYMP TL++HLF W +P+ W RL
Sbjct: 634 EIAVLTKVRHRHLVTLLGYCLDGNEKLLVYEYMPQGTLSRHLFEWSEEGLKPLLWKQRLT 693
Query: 160 VALHIAEALEYC--TSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-SYSTNL 216
+AL +A +EY + + ++ DL I+ DD+ +++ FGL++ + +G+ S T +
Sbjct: 694 LALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRI 753
Query: 217 AFT----PPEYLRTGRVTPESVMYSFGTLLLDLLSGK----HIPPSHALDLI-------- 260
A T PEY TGRVT + +YSFG +L++L++G+ P ++ L+
Sbjct: 754 AGTFGYLAPEYAVTGRVTTKVDVYSFGVILMELITGRKSLDESQPEESIHLVSWFKRMYI 813
Query: 261 -RDRNIQTLTDSCLEGQFSSDEGT-----ELVRLASRCLQYEPRERPN---PRSLVTALV 311
++ + + D+ ++ DE T + LA C EP +RP+ +++++LV
Sbjct: 814 NKEASFKKAIDTTID----LDEETLASVHTVAELAGHCCAREPYQRPDMGHAVNILSSLV 869
Query: 312 TLQKDTEVPSHVLMGI 327
L K ++ + GI
Sbjct: 870 ELWKPSDQNPEDIYGI 885
|
Probable receptor. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q8GXZ3|Y5102_ARATH Serine/threonine-protein kinase At5g01020 OS=Arabidopsis thaliana GN=At5g01020 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/297 (33%), Positives = 144/297 (48%), Gaps = 29/297 (9%)
Query: 44 YSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRI-------AVKRFNRSAWPD 96
+++ L T T F + I+ E G VYKG +++ R+ AVK N+
Sbjct: 57 FTLFELETITKSFRPDYILGEGGF---GTVYKGYIDDNLRVGLKSLPVAVKVLNKEGLQG 113
Query: 97 ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAM 156
R++L E +GQLR+ L L+G CCE D RLLV E+M +L HLF T P+ W+
Sbjct: 114 HREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMLRGSLENHLFRKTTAPLSWSR 173
Query: 157 RLRVALHIAEALEYCTSKER-ALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYS 213
R+ +AL A+ L + + ER +Y D I+ D D +LS FGL K G S
Sbjct: 174 RMMIALGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVS 233
Query: 214 TNL----AFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGK----HIPPSHALDLI----- 260
T + + PEY+ TG +T S +YSFG +LL++L+G+ PS +L+
Sbjct: 234 TRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLEMLTGRKSVDKTRPSKEQNLVDWARP 293
Query: 261 ---RDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQ 314
R + + D LE Q+S + LA CL P+ RP +V L LQ
Sbjct: 294 KLNDKRKLLQIIDPRLENQYSVRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQ 350
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 484 | ||||||
| 225426412 | 488 | PREDICTED: probable serine/threonine-pro | 1.0 | 0.991 | 0.831 | 0.0 | |
| 224058519 | 488 | predicted protein [Populus trichocarpa] | 1.0 | 0.991 | 0.819 | 0.0 | |
| 224071868 | 487 | predicted protein [Populus trichocarpa] | 0.997 | 0.991 | 0.823 | 0.0 | |
| 225454188 | 491 | PREDICTED: probable serine/threonine-pro | 0.993 | 0.979 | 0.812 | 0.0 | |
| 449452322 | 486 | PREDICTED: probable serine/threonine-pro | 0.991 | 0.987 | 0.816 | 0.0 | |
| 357520451 | 495 | Protein kinase-like protein [Medicago tr | 0.997 | 0.975 | 0.789 | 0.0 | |
| 356513393 | 489 | PREDICTED: probable serine/threonine-pro | 0.995 | 0.985 | 0.785 | 0.0 | |
| 356520418 | 491 | PREDICTED: probable serine/threonine-pro | 0.995 | 0.981 | 0.771 | 0.0 | |
| 224127648 | 491 | predicted protein [Populus trichocarpa] | 1.0 | 0.985 | 0.768 | 0.0 | |
| 356528280 | 489 | PREDICTED: probable serine/threonine-pro | 0.995 | 0.985 | 0.779 | 0.0 |
| >gi|225426412|ref|XP_002270065.1| PREDICTED: probable serine/threonine-protein kinase At5g41260 [Vitis vinifera] gi|297742525|emb|CBI34674.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 853 bits (2204), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/488 (83%), Positives = 436/488 (89%), Gaps = 4/488 (0%)
Query: 1 MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMEN 60
MGC+CSK CC SE E VENEE D++P F EY+I+ LR ATSGFA EN
Sbjct: 1 MGCQCSKFWVCCWDSEQKGLVVEPPSVENEENSEADDLPAFHEYTIDQLRMATSGFAAEN 60
Query: 61 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG 120
IVSEHGEKAPNVVYKGKLENQ RIAVKRFN+SAWPDARQFLEEAR+VGQLRN RLANLLG
Sbjct: 61 IVSEHGEKAPNVVYKGKLENQRRIAVKRFNKSAWPDARQFLEEARSVGQLRNHRLANLLG 120
Query: 121 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
CC EGDERLLVAE+MPNDTLAKHLFHWETQPMKWAMRLRVAL++A+ALEYCTSK RALYH
Sbjct: 121 CCSEGDERLLVAEFMPNDTLAKHLFHWETQPMKWAMRLRVALYLAQALEYCTSKGRALYH 180
Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240
DLNAYRIVFDDD +PRLSCFG+MKNSRDG+SYSTNLAFTPPEYLRTGRVTPESVMYSFGT
Sbjct: 181 DLNAYRIVFDDDGDPRLSCFGMMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240
Query: 241 LLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
LLLDLLSGKHIPPSHALDLIRDRNIQ LTDSCLEGQFSSD+GTELVRLASRCLQYEPRER
Sbjct: 241 LLLDLLSGKHIPPSHALDLIRDRNIQMLTDSCLEGQFSSDDGTELVRLASRCLQYEPRER 300
Query: 301 PNPRSLVTALVTLQKDTEVPSHVLMGIPHGAAALPLSPLGDACLRMDLTAIHEILEKLGY 360
PNP+SLV AL+ LQK+TEVPSHVLMG+P A LPLSPLG+ACLRMDLTAIHEILEKLGY
Sbjct: 301 PNPKSLVAALIPLQKETEVPSHVLMGMPQSGATLPLSPLGEACLRMDLTAIHEILEKLGY 360
Query: 361 KDDEGAATE----MWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAF 416
KDDEGA TE MWT QMQETLNSKKKGDVAFRHKDFRA+IECYTQFIDVGTMVSPT F
Sbjct: 361 KDDEGATTELSFQMWTNQMQETLNSKKKGDVAFRHKDFRAAIECYTQFIDVGTMVSPTVF 420
Query: 417 ARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASIL 476
ARRSL YLMSDMPQEALNDA QAQVISP+WH+A+YLQA AL ALG+ENE++ L+E S+L
Sbjct: 421 ARRSLCYLMSDMPQEALNDAVQAQVISPIWHIASYLQAVALSALGRENESEVTLKEGSVL 480
Query: 477 ENKKSANA 484
E KK+ A
Sbjct: 481 EEKKNKTA 488
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224058519|ref|XP_002299534.1| predicted protein [Populus trichocarpa] gi|222846792|gb|EEE84339.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 847 bits (2188), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/488 (81%), Positives = 441/488 (90%), Gaps = 4/488 (0%)
Query: 1 MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMEN 60
MGCECSKL+ CC S+Y + PE + + EE+ +D++P F EY+IETLR ATSGF++EN
Sbjct: 1 MGCECSKLTKCCWSSDYNGSVPEDHNEDKEERSELDDLPAFREYNIETLRMATSGFSVEN 60
Query: 61 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG 120
IVSEHGEKAPNVVYKGKLENQ RI VKRFNRS+WPDARQFLEEAR VGQLRN RLANLLG
Sbjct: 61 IVSEHGEKAPNVVYKGKLENQRRIVVKRFNRSSWPDARQFLEEARTVGQLRNHRLANLLG 120
Query: 121 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
CCCEGDERLLV+E+MPNDTLAKHLFHWETQPMKWAMRLRVALH+A+ALEYC SK RALYH
Sbjct: 121 CCCEGDERLLVSEFMPNDTLAKHLFHWETQPMKWAMRLRVALHLAQALEYCASKGRALYH 180
Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240
DLNAYR+VFDD+ NPRLSCFGLMKNS DG+SYSTNLAFTPPEYLRTGRVT ESV+YSFGT
Sbjct: 181 DLNAYRVVFDDEGNPRLSCFGLMKNSIDGKSYSTNLAFTPPEYLRTGRVTAESVIYSFGT 240
Query: 241 LLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
LLLDLLSGKHIPPSHALDLIRDRNIQ L+DSCLEGQF++D+GTELVRLASRCLQYEPRER
Sbjct: 241 LLLDLLSGKHIPPSHALDLIRDRNIQMLSDSCLEGQFANDDGTELVRLASRCLQYEPRER 300
Query: 301 PNPRSLVTALVTLQKDTEVPSHVLMGIPHGAAALPLSPLGDACLRMDLTAIHEILEKLGY 360
PNP+SLV AL+ LQKDTEVPSH LMGI GAAALPLSPLG+ACLRMDLTAIHEILEKLGY
Sbjct: 301 PNPKSLVAALIPLQKDTEVPSHELMGIQDGAAALPLSPLGEACLRMDLTAIHEILEKLGY 360
Query: 361 KDDEGAATE----MWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAF 416
KDDEGAATE MWT QMQE LNSKKKGDVAFRHKDFRA+ E Y+QFI++GTMVSPT
Sbjct: 361 KDDEGAATELSFQMWTNQMQEILNSKKKGDVAFRHKDFRAATEFYSQFINIGTMVSPTVH 420
Query: 417 ARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASIL 476
ARRSLSYL+SDMPQEALNDA QAQ I P+WH+A+YLQAAAL +GKENEA+AAL+EAS L
Sbjct: 421 ARRSLSYLLSDMPQEALNDALQAQAIFPIWHIASYLQAAALLTMGKENEAKAALKEASTL 480
Query: 477 ENKKSANA 484
ENK++ NA
Sbjct: 481 ENKRNTNA 488
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224071868|ref|XP_002303586.1| predicted protein [Populus trichocarpa] gi|222841018|gb|EEE78565.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 842 bits (2174), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/488 (82%), Positives = 439/488 (89%), Gaps = 5/488 (1%)
Query: 1 MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMEN 60
MGCECSKLS CC S+Y + PE ++ NEEK +D++P F EY+IETLR ATSGF++EN
Sbjct: 1 MGCECSKLSKCCWSSDYNGSVPEDRNEVNEEKSELDDLPAFREYNIETLRMATSGFSVEN 60
Query: 61 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG 120
IVSEHGEKAPNVVYKGKLENQ R+AVKRFNRSAWPDARQFLEEARAVGQLRN RLANLLG
Sbjct: 61 IVSEHGEKAPNVVYKGKLENQRRVAVKRFNRSAWPDARQFLEEARAVGQLRNHRLANLLG 120
Query: 121 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
CC EGDERLLVAE+MPNDTLAKHLFHWET+PMKWAMRLRVALH+A+ALEYCTSK RALYH
Sbjct: 121 CCGEGDERLLVAEFMPNDTLAKHLFHWETKPMKWAMRLRVALHLAQALEYCTSKGRALYH 180
Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240
DLNAYRIVFDD+ NPRLSCFGLMKN RDG+SYSTNLAFTPPEYLRTGRV PESV+YSFGT
Sbjct: 181 DLNAYRIVFDDEGNPRLSCFGLMKNRRDGKSYSTNLAFTPPEYLRTGRVIPESVIYSFGT 240
Query: 241 LLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
LLLDLLSGKHIPPSHALDLIRDRNIQ LTDSCLEGQF++D+GTELVRLASRCLQYEPRER
Sbjct: 241 LLLDLLSGKHIPPSHALDLIRDRNIQMLTDSCLEGQFTNDDGTELVRLASRCLQYEPRER 300
Query: 301 PNPRSLVTALVTLQKDTEVPSHVLMGIPHGAAALPLSPLGDACLRMDLTAIHEILEKLGY 360
PN +SLV AL+ LQKDTEVPSH LMGI GAAALPLSPLG+ACLRMDLTAIHEILEKLGY
Sbjct: 301 PNSKSLVAALIPLQKDTEVPSHELMGIQDGAAALPLSPLGEACLRMDLTAIHEILEKLGY 360
Query: 361 KDDEGAATE----MWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAF 416
KDDEG ATE MWT Q QETLN+ KKGDVAF+HKDF A+ E Y+QFIDVG MVSPT
Sbjct: 361 KDDEGTATELSFQMWTNQKQETLNT-KKGDVAFQHKDFIAATELYSQFIDVGNMVSPTVH 419
Query: 417 ARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASIL 476
ARRSLSYLM+++PQEALNDA QAQ ISP+WH+A+YLQA ALF LG+ENEAQAAL+E S L
Sbjct: 420 ARRSLSYLMTNLPQEALNDALQAQAISPIWHIASYLQAVALFVLGRENEAQAALKEGSTL 479
Query: 477 ENKKSANA 484
ENK+S NA
Sbjct: 480 ENKRSTNA 487
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225454188|ref|XP_002272416.1| PREDICTED: probable serine/threonine-protein kinase At5g41260 [Vitis vinifera] gi|297745267|emb|CBI40347.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 830 bits (2143), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/485 (81%), Positives = 432/485 (89%), Gaps = 4/485 (0%)
Query: 1 MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMEN 60
MGC+CSKL+ CC S++ + EA DV+N EK VD +PVFCEY+ E L+ ATSGFA+EN
Sbjct: 1 MGCQCSKLAPCCWDSQFKGSVLEAPDVDNGEKSEVDYLPVFCEYTFEQLKNATSGFAVEN 60
Query: 61 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG 120
IVSEHGEKAPNVVYKGKLENQ RIAVKRFNR AWPDARQF EEARAVGQLRN RLANLLG
Sbjct: 61 IVSEHGEKAPNVVYKGKLENQRRIAVKRFNRVAWPDARQFSEEARAVGQLRNHRLANLLG 120
Query: 121 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
CCCE +ERLLVAEYMPN+TLAKHLFHWETQPMKWAMRLRV LH+A+ALEYCT + RALYH
Sbjct: 121 CCCEDNERLLVAEYMPNETLAKHLFHWETQPMKWAMRLRVVLHLAQALEYCTGRGRALYH 180
Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240
DLNAYRI+FD+D NPRLSCFGLMKNSRDG+SYSTNLAFTPPEYLRTGRVTPESV+YSFGT
Sbjct: 181 DLNAYRILFDEDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGT 240
Query: 241 LLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
LLLDLLSGKHIPPSHALDLIRDRN+Q LTDSCLEGQF++D+GTELVRLASRCLQYEPRER
Sbjct: 241 LLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFTNDDGTELVRLASRCLQYEPRER 300
Query: 301 PNPRSLVTALVTLQKDTEVPSHVLMGIPHGAAALPLSPLGDACLRMDLTAIHEILEKLGY 360
PNP+SLV AL LQK+TEVPSHVLMGIPH A+ PLSPLG+AC RMDLTAIHEILE +GY
Sbjct: 301 PNPKSLVAALTPLQKETEVPSHVLMGIPHSASFSPLSPLGEACSRMDLTAIHEILESVGY 360
Query: 361 KDDEGAATE----MWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAF 416
KDDEG E MWT QMQETLNSKKKGD AFR KDFRA+I+CYTQFIDVGTMVSPT
Sbjct: 361 KDDEGMTNELSFQMWTDQMQETLNSKKKGDAAFRQKDFRAAIDCYTQFIDVGTMVSPTVC 420
Query: 417 ARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASIL 476
ARRSL YLMSDMPQEALNDA QAQVISPVWH+A+YLQAAAL LG ENEAQAAL++ + L
Sbjct: 421 ARRSLCYLMSDMPQEALNDAMQAQVISPVWHIASYLQAAALTGLGMENEAQAALKDGTTL 480
Query: 477 ENKKS 481
E +++
Sbjct: 481 EAQRN 485
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449452322|ref|XP_004143908.1| PREDICTED: probable serine/threonine-protein kinase At5g41260-like [Cucumis sativus] gi|449495800|ref|XP_004159948.1| PREDICTED: probable serine/threonine-protein kinase At5g41260-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 822 bits (2123), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/486 (81%), Positives = 435/486 (89%), Gaps = 6/486 (1%)
Query: 1 MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMEN 60
MGCECSK S C GSE + D E+ K D +P F E++I+ LRTATSGFA+EN
Sbjct: 1 MGCECSKFSDCF-GSEETKPVARVPDNESIGKSEFD-LPAFREFTIDQLRTATSGFAVEN 58
Query: 61 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG 120
IVSEHGEKAPNVVYKGKL+NQ RIAVKRFNRSAWPDARQFL+EARAVGQLRN+RLANLLG
Sbjct: 59 IVSEHGEKAPNVVYKGKLDNQRRIAVKRFNRSAWPDARQFLDEARAVGQLRNQRLANLLG 118
Query: 121 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
CC EG+ERLLVAE+MPN+TLAKHLFHWE QPMKW+MRLRVALH+A+ALEYCTSK RALYH
Sbjct: 119 CCFEGEERLLVAEFMPNETLAKHLFHWENQPMKWSMRLRVALHLAQALEYCTSKGRALYH 178
Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240
DLNAYRIVFDD+ NPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTG +TPESV+YSFGT
Sbjct: 179 DLNAYRIVFDDEGNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGGITPESVIYSFGT 238
Query: 241 LLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
LLLDLLSGKHIPPSHALDLIRDRNIQ LTDSCLEGQFS+DEGTELVRLASRCLQYEPRER
Sbjct: 239 LLLDLLSGKHIPPSHALDLIRDRNIQMLTDSCLEGQFSNDEGTELVRLASRCLQYEPRER 298
Query: 301 PNPRSLVTALVTLQKDTEVPSHVLMGIPHGAAALPLSPLGDACLRMDLTAIHEILEKLGY 360
PN +SLVTAL+ LQKD EVPSHVLMGIP AAAL LSPLG+A LRMDLTAIHE+LE +GY
Sbjct: 299 PNTKSLVTALIPLQKDLEVPSHVLMGIPQDAAALNLSPLGEASLRMDLTAIHEVLEMIGY 358
Query: 361 KDDEGAATE----MWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAF 416
KDDEGAATE MWT QMQ+TL SKKKGDVAFR K+FR +IECYTQFIDVGTMVSPT F
Sbjct: 359 KDDEGAATELSFQMWTNQMQDTLTSKKKGDVAFRQKEFRTAIECYTQFIDVGTMVSPTVF 418
Query: 417 ARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASIL 476
ARRSLSYL+S+MP+EALNDA QAQVISP+WH+A+YLQA+ALF LGKENEA ALRE S+L
Sbjct: 419 ARRSLSYLISNMPEEALNDAVQAQVISPLWHVASYLQASALFTLGKENEAHIALREGSVL 478
Query: 477 ENKKSA 482
E+KK+A
Sbjct: 479 ESKKNA 484
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357520451|ref|XP_003630514.1| Protein kinase-like protein [Medicago truncatula] gi|355524536|gb|AET04990.1| Protein kinase-like protein [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 806 bits (2082), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/489 (78%), Positives = 430/489 (87%), Gaps = 6/489 (1%)
Query: 1 MGCECSKLSACCSGSEYGEA-APEAQDVENEEKPGVDN-VPVFCEYSIETLRTATSGFAM 58
MGC SK S CC +E G PEA ENE+ N + F EY+I+ LR ATSGFA+
Sbjct: 7 MGCNFSKYSTCCCSTEQGGVQVPEANIEENEDNNVEGNGLASFREYTIDQLRKATSGFAI 66
Query: 59 ENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANL 118
ENIVSEHGEKAPNVVYKGKLENQ RIAVKRFN+S WPDA QFLEEARAVGQLR++RLANL
Sbjct: 67 ENIVSEHGEKAPNVVYKGKLENQVRIAVKRFNKSNWPDAHQFLEEARAVGQLRSQRLANL 126
Query: 119 LGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERAL 178
LGCCCEGDERLLV+EYM NDTLAKHLFHWETQPMKWAMRLRVAL++A+ALEYCTSK RAL
Sbjct: 127 LGCCCEGDERLLVSEYMSNDTLAKHLFHWETQPMKWAMRLRVALYLAQALEYCTSKGRAL 186
Query: 179 YHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSF 238
YHDLNAYR++FDDD NP+LSCFGLMKNSRDG+SYSTNLAFTPPEYLRTGRVTPESV YSF
Sbjct: 187 YHDLNAYRVLFDDDFNPKLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVTYSF 246
Query: 239 GTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPR 298
GTLLLDLLSGKHIPPSHALDLIRDRN+Q+LTDSCLEGQFS DEGTELVRLASRCLQ EPR
Sbjct: 247 GTLLLDLLSGKHIPPSHALDLIRDRNLQSLTDSCLEGQFSDDEGTELVRLASRCLQSEPR 306
Query: 299 ERPNPRSLVTALVTLQKDTEVPSHVLMGIPHGAAALPLSPLGDACLRMDLTAIHEILEKL 358
ERPNP+SLVTAL+ LQKD+EVPSHVLMGIP G+AA PL+PLG+ACLRMDLT+IHE+LEK+
Sbjct: 307 ERPNPKSLVTALIPLQKDSEVPSHVLMGIPDGSAAFPLTPLGEACLRMDLTSIHEVLEKI 366
Query: 359 GYKDDEGAATE----MWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPT 414
GYKDDEGAATE MWT QMQ+T++SKKKGD AFR KDF+ +IE YTQFI+VG+MVSPT
Sbjct: 367 GYKDDEGAATELSFQMWTNQMQQTIDSKKKGDSAFRVKDFKTAIEGYTQFIEVGSMVSPT 426
Query: 415 AFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREAS 474
+ARRSLSYL+++MP EAL DA QAQ+ISPVW++A YLQA AL ALGKEN+AQ AL+E S
Sbjct: 427 IYARRSLSYLINNMPNEALGDAMQAQMISPVWYIAFYLQAVALLALGKENDAQVALKEGS 486
Query: 475 ILENKKSAN 483
LE K S N
Sbjct: 487 SLEAKNSTN 495
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356513393|ref|XP_003525398.1| PREDICTED: probable serine/threonine-protein kinase At5g41260-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 805 bits (2079), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/490 (78%), Positives = 432/490 (88%), Gaps = 8/490 (1%)
Query: 1 MGCECSKLSACCSGSEYGEAAPEAQ-DVENEEK--PGVDNVPVFCEYSIETLRTATSGFA 57
MGC SK +ACC+GSE A EAQ D NE+ GVD +P F E++I+ LR ATSGFA
Sbjct: 1 MGCGFSKYTACCTGSEQDGLAAEAQVDGGNEDNVVEGVD-LPWFHEFTIDQLRKATSGFA 59
Query: 58 MENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLAN 117
+ENIVSEHGEKAPNVVYKG+L+NQ RIAVKRFNR+AWP+A+ FLEEARAVGQLRN+RL N
Sbjct: 60 IENIVSEHGEKAPNVVYKGRLDNQMRIAVKRFNRNAWPEAQPFLEEARAVGQLRNQRLIN 119
Query: 118 LLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERA 177
LLGCCCEG+ERLLVAEYMPNDTL KHLFHWETQPM+WAMR+RVAL +A+ALEYCTSK RA
Sbjct: 120 LLGCCCEGEERLLVAEYMPNDTLTKHLFHWETQPMRWAMRMRVALCLAQALEYCTSKGRA 179
Query: 178 LYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYS 237
LYHDLNAYR+++DDD NPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESV YS
Sbjct: 180 LYHDLNAYRVLYDDDYNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVTYS 239
Query: 238 FGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEP 297
FGTLLLDLLSGKHIPPSHALDLIRD+N+Q L+DSCLEG+ ++D+GTELVRLASRCLQ EP
Sbjct: 240 FGTLLLDLLSGKHIPPSHALDLIRDKNLQMLSDSCLEGELTNDDGTELVRLASRCLQSEP 299
Query: 298 RERPNPRSLVTALVTLQKDTEVPSHVLMGIPHGAAALPLSPLGDACLRMDLTAIHEILEK 357
RERPNP+SLV AL+ LQKD+EVPSHVLMGIP G AA PLSPLG+ACLRMDLTA+HE++EK
Sbjct: 300 RERPNPKSLVAALIPLQKDSEVPSHVLMGIPDGTAAFPLSPLGEACLRMDLTALHEVMEK 359
Query: 358 LGYKDDEGAATE----MWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSP 413
+GYKDDEGAATE MWT QMQETLNSKKKGD AFRHKDF+ +I+ YT FIDVGTMVSP
Sbjct: 360 IGYKDDEGAATELSFQMWTNQMQETLNSKKKGDAAFRHKDFKTAIDSYTMFIDVGTMVSP 419
Query: 414 TAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREA 473
T + RRSL YLMS+MP EALNDA QAQVISPVW++A YLQA AL ALGKEN+AQ AL+E
Sbjct: 420 TVYVRRSLCYLMSNMPDEALNDAMQAQVISPVWYIAFYLQAVALLALGKENDAQVALKEG 479
Query: 474 SILENKKSAN 483
S LE KK+ N
Sbjct: 480 SSLETKKNTN 489
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356520418|ref|XP_003528859.1| PREDICTED: probable serine/threonine-protein kinase At5g41260-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 798 bits (2062), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/486 (77%), Positives = 421/486 (86%), Gaps = 4/486 (0%)
Query: 1 MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMEN 60
MG +CS+L CC S+ + E D E E+ V N P F EY++E L+ ATSGFA+EN
Sbjct: 1 MGIQCSRLIPCCVDSQVKASVIETPDAEIEDSSEVSNWPTFREYTLEQLKNATSGFAVEN 60
Query: 61 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG 120
IVSEHGEKAPNVVYKGKLENQ RIAVKRFNR+AWPDARQFLEEAR+VGQLRN+RLANLLG
Sbjct: 61 IVSEHGEKAPNVVYKGKLENQMRIAVKRFNRNAWPDARQFLEEARSVGQLRNQRLANLLG 120
Query: 121 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
CCCEG+ERLLVAEYMPN+TLAKHLFHWETQPMKWAMRLRV LH+A+ALEYCTSK RALYH
Sbjct: 121 CCCEGEERLLVAEYMPNETLAKHLFHWETQPMKWAMRLRVVLHLAQALEYCTSKGRALYH 180
Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240
DLNAYR++FD+D NPRLS FGLMKNSRDG+SYSTNLAFTPPEYLRTGRVTPESV+YSFGT
Sbjct: 181 DLNAYRVLFDEDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGT 240
Query: 241 LLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
LLLDLLSGKHIPPSHALD+IR RN+Q LTDSCLEGQFS D+GTELVRLASRCLQYEPRER
Sbjct: 241 LLLDLLSGKHIPPSHALDVIRGRNLQMLTDSCLEGQFSDDDGTELVRLASRCLQYEPRER 300
Query: 301 PNPRSLVTALVTLQKDTEVPSHVLMGIPHGAAALPLSPLGDACLRMDLTAIHEILEKLGY 360
PNP+SLV AL LQK+TEVPSHVLMGI H LSPLG+AC R DLTAI E+LE +GY
Sbjct: 301 PNPKSLVVALAPLQKETEVPSHVLMGIQHSTTFASLSPLGEACSRKDLTAIQEVLESIGY 360
Query: 361 KDDEGAATE----MWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAF 416
KDDEG A E MWT QMQ+TLN KKKGDVAFR KDFR +IECY+QFID GTMVSPT +
Sbjct: 361 KDDEGVANELSFHMWTDQMQDTLNCKKKGDVAFRQKDFRLAIECYSQFIDAGTMVSPTVY 420
Query: 417 ARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASIL 476
ARRSL YL+SDMPQE+LNDA QAQ++SPVWH+A+YLQ+ AL LG ENEAQAAL+E + +
Sbjct: 421 ARRSLCYLISDMPQESLNDAIQAQIVSPVWHIASYLQSVALTGLGMENEAQAALKEGTTM 480
Query: 477 ENKKSA 482
E+K++A
Sbjct: 481 ESKRNA 486
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224127648|ref|XP_002320126.1| predicted protein [Populus trichocarpa] gi|222860899|gb|EEE98441.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 798 bits (2061), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/488 (76%), Positives = 425/488 (87%), Gaps = 4/488 (0%)
Query: 1 MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMEN 60
MG +C+KL+ CC S++ A E V NEEK V+++P F E++ E L+ ATSGFA+EN
Sbjct: 1 MGSQCTKLTPCCLDSQFKAAVVEVPSVGNEEKSEVNDLPTFREFTFEQLKNATSGFAVEN 60
Query: 61 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG 120
IVSEHGEKAPNVVYKGKLENQ RIAVKRFNR AWPDARQFLEEAR+VGQLRN RL NLLG
Sbjct: 61 IVSEHGEKAPNVVYKGKLENQRRIAVKRFNRMAWPDARQFLEEARSVGQLRNNRLVNLLG 120
Query: 121 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
CCCEGDERLLVAE+MPN+TLAKHLFHWETQP+KWAMRLRV LH+AEALEYCTSK RALYH
Sbjct: 121 CCCEGDERLLVAEFMPNETLAKHLFHWETQPIKWAMRLRVVLHLAEALEYCTSKGRALYH 180
Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240
DLNAYRI+FD+D NP+LS FGLMKNSRDG+SYSTNLAFTPPEYLRTGRVTPESV+YSFGT
Sbjct: 181 DLNAYRILFDEDGNPKLSSFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGT 240
Query: 241 LLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
LLLD LSGKHIPPSHALDLIRDRN+Q LTDSCLEGQFS+D+GTELVRLASRCLQYE RER
Sbjct: 241 LLLDHLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFSNDDGTELVRLASRCLQYELRER 300
Query: 301 PNPRSLVTALVTLQKDTEVPSHVLMGIPHGAAALPLSPLGDACLRMDLTAIHEILEKLGY 360
P+ + LV AL LQK+T+V SH+LMGIPH A++ PLSP G+ACLR DLTAIHEIL+ +GY
Sbjct: 301 PSLKFLVAALTPLQKETDVASHILMGIPHSASSSPLSPFGEACLRKDLTAIHEILDNIGY 360
Query: 361 KDDEGAATE----MWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAF 416
KDD+G A E MWT +MQETLN+KKKGD +F+ KDFR +IECYTQFIDVGTMVSPT F
Sbjct: 361 KDDQGVANELSFQMWTDEMQETLNTKKKGDASFKQKDFRVAIECYTQFIDVGTMVSPTVF 420
Query: 417 ARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASIL 476
ARRSLSYLMSDMPQE L+DA QAQVISPVWH+A+YLQA AL LG ENEA AAL+E + +
Sbjct: 421 ARRSLSYLMSDMPQEGLSDAMQAQVISPVWHVASYLQAVALATLGMENEAHAALKEGTNI 480
Query: 477 ENKKSANA 484
E KK+ ++
Sbjct: 481 EAKKNQDS 488
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356528280|ref|XP_003532732.1| PREDICTED: probable serine/threonine-protein kinase At5g41260-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 798 bits (2061), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/490 (77%), Positives = 432/490 (88%), Gaps = 8/490 (1%)
Query: 1 MGCECSKLSACCSGSEYGEAAPEAQ-DVENEEK--PGVDNVPVFCEYSIETLRTATSGFA 57
MGC+ SK + CC+G+E A EAQ D NE+ GVD +P F E++IE LR ATSGFA
Sbjct: 1 MGCDFSKYTVCCTGTEQDGPAAEAQVDGGNEDNVVEGVD-LPRFHEFTIEQLRRATSGFA 59
Query: 58 MENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLAN 117
+ENIVSEHGEKAPNVVYKGKL+NQ RIAVKRFNR+AWP+A+ FLEEARAVGQLRN+RL N
Sbjct: 60 IENIVSEHGEKAPNVVYKGKLDNQMRIAVKRFNRNAWPEAQPFLEEARAVGQLRNQRLIN 119
Query: 118 LLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERA 177
LLGCCCEG+ERLLVAEYMPNDTLAKHLFHWETQPM+WAMR+RVAL +A+ALEYCTSK RA
Sbjct: 120 LLGCCCEGEERLLVAEYMPNDTLAKHLFHWETQPMRWAMRMRVALCLAQALEYCTSKGRA 179
Query: 178 LYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYS 237
LYHDLNAYR+++DD+ NPRLSCFGLMKNSRDG+SYSTNLAFTPPEYLRTGRVTPESV YS
Sbjct: 180 LYHDLNAYRVLYDDEYNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVTYS 239
Query: 238 FGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEP 297
FGTLLLDLLSGKHIPPS ALDLIRD+N+Q L+DSCLEG+ ++D+GTELVRLASRCLQ EP
Sbjct: 240 FGTLLLDLLSGKHIPPSRALDLIRDKNLQMLSDSCLEGELTNDDGTELVRLASRCLQSEP 299
Query: 298 RERPNPRSLVTALVTLQKDTEVPSHVLMGIPHGAAALPLSPLGDACLRMDLTAIHEILEK 357
RERPNP+SLV AL+ LQKD+EVPS+VLMGIP G A PLSPLG+ACLRMDLTA+HE++EK
Sbjct: 300 RERPNPKSLVAALIPLQKDSEVPSNVLMGIPDGTAGFPLSPLGEACLRMDLTALHEVMEK 359
Query: 358 LGYKDDEGAATE----MWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSP 413
+GYKDDEGAATE MWT QMQETLNSKKKGD AFRHKDF+ +I+ YT FIDVGTMVSP
Sbjct: 360 IGYKDDEGAATELSFQMWTNQMQETLNSKKKGDAAFRHKDFKTAIDSYTMFIDVGTMVSP 419
Query: 414 TAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREA 473
T +ARRSL YLMS+MP EALNDA QAQVISPVW++A YLQA AL ALGKEN+AQ L+E
Sbjct: 420 TIYARRSLCYLMSNMPDEALNDAMQAQVISPVWYIAFYLQAVALLALGKENDAQVPLKEG 479
Query: 474 SILENKKSAN 483
S LENKK+ N
Sbjct: 480 SSLENKKNTN 489
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 484 | ||||||
| TAIR|locus:2031279 | 487 | BSK7 "brassinosteroid-signalin | 0.991 | 0.985 | 0.765 | 9.4e-201 | |
| TAIR|locus:2155115 | 487 | BSK8 "brassinosteroid-signalin | 0.993 | 0.987 | 0.742 | 1.8e-197 | |
| TAIR|locus:2127118 | 489 | BSK3 "brassinosteroid-signalin | 0.985 | 0.975 | 0.745 | 1.9e-193 | |
| TAIR|locus:2154538 | 489 | BSK5 "brassinosteroid-signalin | 0.989 | 0.979 | 0.688 | 7e-180 | |
| TAIR|locus:2198160 | 483 | BSK4 "brassinosteroid-signalin | 0.981 | 0.983 | 0.686 | 8.6e-175 | |
| TAIR|locus:2084475 | 490 | BSK6 "brassinosteroid-signalin | 0.985 | 0.973 | 0.670 | 3e-172 | |
| TAIR|locus:2122058 | 512 | BSK1 "brassinosteroid-signalin | 0.923 | 0.873 | 0.610 | 3e-149 | |
| TAIR|locus:2142315 | 489 | BSK2 "brassinosteroid-signalin | 0.983 | 0.973 | 0.558 | 2.9e-142 | |
| TAIR|locus:2083499 | 477 | BSK9 "brassinosteroid-signalin | 0.929 | 0.943 | 0.576 | 1.2e-136 | |
| TAIR|locus:2150074 | 499 | BSK10 "brassinosteroid-signali | 0.983 | 0.953 | 0.540 | 9.1e-132 |
| TAIR|locus:2031279 BSK7 "brassinosteroid-signaling kinase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1943 (689.0 bits), Expect = 9.4e-201, P = 9.4e-201
Identities = 372/486 (76%), Positives = 417/486 (85%)
Query: 1 MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDN-VPVFCEYSIETLRTATSGFAME 59
MGCE SKL A C S+ E + +E++ G N +P F E+SIETLR ATSGFA E
Sbjct: 1 MGCEVSKLCAFCCVSD-PEGSNHGVTGLDEDRRGEGNDLPQFREFSIETLRNATSGFATE 59
Query: 60 NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 119
NIVSEHGEKAPNVVYKGKL+NQ RIAVKRFNR AWPD+RQFLEEA+AVGQLRN R+ANLL
Sbjct: 60 NIVSEHGEKAPNVVYKGKLDNQRRIAVKRFNRKAWPDSRQFLEEAKAVGQLRNYRMANLL 119
Query: 120 GCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALY 179
GCC EG+ERLLVAE+MPN+TLAKHLFHWE+QPMKWAMRLRVALHIA+ALEYCT K RALY
Sbjct: 120 GCCYEGEERLLVAEFMPNETLAKHLFHWESQPMKWAMRLRVALHIAQALEYCTGKGRALY 179
Query: 180 HDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFG 239
HDLNAYR++FDDD NPRLSCFGLMKNSRDG+SYSTNLAFTPPEYLRTGRVTPESVMYS+G
Sbjct: 180 HDLNAYRVLFDDDSNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVMYSYG 239
Query: 240 TLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRE 299
TLLLDLLSGKHIPPSHALDLIRDRNIQ L DSCLEGQFSSD+GTEL+RLASRCLQYEPRE
Sbjct: 240 TLLLDLLSGKHIPPSHALDLIRDRNIQMLIDSCLEGQFSSDDGTELIRLASRCLQYEPRE 299
Query: 300 RPNPRSLVTALVTLQKDTEVPSHVLMGIPHGAAALPLSPLGDACLRMDLTAIHEILEKLG 359
RPNP+SLVTA++ LQKD E PSH LMGIP A+ PLSPLG+ACLR DLTAIHEILEKL
Sbjct: 300 RPNPKSLVTAMIPLQKDLETPSHQLMGIPSSASTTPLSPLGEACLRTDLTAIHEILEKLS 359
Query: 360 YKDDEGAATE----MWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTA 415
YKDDEGAATE MWT QMQ++LN KKKGDVAFRHK+F +I+CY+QFI+ GTMVSPT
Sbjct: 360 YKDDEGAATELSFQMWTNQMQDSLNFKKKGDVAFRHKEFANAIDCYSQFIEGGTMVSPTV 419
Query: 416 FARRSLSYLMSDMPQEALNDASQAQVISPVWHMXXXXXXXXXXXXGKENEAQAALREASI 475
+ARRSL YLM++MPQEALNDA QAQVISP WH+ G+ENEA AAL++ S+
Sbjct: 420 YARRSLCYLMNEMPQEALNDAMQAQVISPAWHIASYLQAVALSALGQENEAHAALKDGSM 479
Query: 476 LENKKS 481
LE+K++
Sbjct: 480 LESKRN 485
|
|
| TAIR|locus:2155115 BSK8 "brassinosteroid-signaling kinase 8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1912 (678.1 bits), Expect = 1.8e-197, P = 1.8e-197
Identities = 360/485 (74%), Positives = 414/485 (85%)
Query: 1 MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMEN 60
MGCE SKLSA C SE G + P+ ++ E + +++P F E+SIET+R ATSGFA EN
Sbjct: 1 MGCEVSKLSALCCVSESGRSNPDVTGLDEEGRGESNDLPQFREFSIETIRNATSGFAAEN 60
Query: 61 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG 120
IVSEHGE+APNVVYKGKLENQ RIAVKRFNR +WPD+RQFLEEA+AVGQLRN R+ANLLG
Sbjct: 61 IVSEHGERAPNVVYKGKLENQRRIAVKRFNRKSWPDSRQFLEEAKAVGQLRNHRMANLLG 120
Query: 121 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
CC E +ERLL+AE+MPN+TLAKHLFHWE+QPMKWAMRLRVALHIA+ALEYCTSK RALYH
Sbjct: 121 CCYEDEERLLIAEFMPNETLAKHLFHWESQPMKWAMRLRVALHIAQALEYCTSKGRALYH 180
Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240
DLNAYR++FDDD NPRLSCFGLMKNSRDG+SYSTNLAFTPPEYLRTGRVTPESV+YSFGT
Sbjct: 181 DLNAYRVLFDDDANPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGT 240
Query: 241 LLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
LLLDLLSGKHIPPSHALDLIRDRNIQ L DS LEGQFSSD+GTEL+RLASRCLQYEPRER
Sbjct: 241 LLLDLLSGKHIPPSHALDLIRDRNIQMLMDSGLEGQFSSDDGTELIRLASRCLQYEPRER 300
Query: 301 PNPRSLVTALVTLQKDTEVPSHVLMGIPHGAAALPLSPLGDACLRMDLTAIHEILEKLGY 360
PNP+SLV+A++ LQKD E+ SH L+G+P+ A LSPLG+ACLR DLTAIHEI+EKLGY
Sbjct: 301 PNPKSLVSAMIPLQKDLEIASHQLLGVPNSATTTALSPLGEACLRSDLTAIHEIIEKLGY 360
Query: 361 KDDEGAATE----MWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAF 416
KDDEGA TE MWT QMQ+TL KKKGD AFRHKDF +IECY+QFI+VGTM SPT
Sbjct: 361 KDDEGATTELSFQMWTDQMQDTLVFKKKGDSAFRHKDFAKAIECYSQFIEVGTMGSPTVH 420
Query: 417 ARRSLSYLMSDMPQEALNDASQAQVISPVWHMXXXXXXXXXXXXGKENEAQAALREASIL 476
AR+SL YLM+DMP+EALN+A QAQVISP WH+ G+ENEA AL++ ++L
Sbjct: 421 ARQSLCYLMNDMPREALNNAMQAQVISPAWHIASYLQAVALSALGQENEAHTALKDGAML 480
Query: 477 ENKKS 481
E+K++
Sbjct: 481 ESKRN 485
|
|
| TAIR|locus:2127118 BSK3 "brassinosteroid-signaling kinase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1874 (664.7 bits), Expect = 1.9e-193, P = 1.9e-193
Identities = 360/483 (74%), Positives = 404/483 (83%)
Query: 1 MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMEN 60
MG +CS LS CC + + A EA DV+N E + +VP F EY++E L+ ATSGFA+E
Sbjct: 1 MGGQCSSLS-CCRNTSHKTAVLEAPDVDNGESSEITDVPNFREYTLEQLKAATSGFAVEY 59
Query: 61 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG 120
IVSEHGEKAPNVVYKGKLENQ +IAVKRF R AWPD+RQFLEEAR+VGQLR+ R+ANLLG
Sbjct: 60 IVSEHGEKAPNVVYKGKLENQKKIAVKRFTRMAWPDSRQFLEEARSVGQLRSERMANLLG 119
Query: 121 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
CCCEGDERLLVAE+MPN+TLAKHLFHWETQPMKW MRLRV L++A+ALEYCTSK R LYH
Sbjct: 120 CCCEGDERLLVAEFMPNETLAKHLFHWETQPMKWTMRLRVVLYLAQALEYCTSKGRTLYH 179
Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240
DLNAYR++FD++ NPRLS FGLMKNSRDG+SYSTNLAFTPPEYLRTGR+TPESV+YSFGT
Sbjct: 180 DLNAYRVLFDEECNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRITPESVIYSFGT 239
Query: 241 LLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
LLLDLLSGKHIPPSHALDLIRDRN+QTLTDSCL+GQFS +GTELVRLASRCLQYE RER
Sbjct: 240 LLLDLLSGKHIPPSHALDLIRDRNLQTLTDSCLDGQFSDSDGTELVRLASRCLQYEARER 299
Query: 301 PNPRSLVTALVTLQKDTEVPSHVLMGIPHGAAALPLSPLGDACLRMDLTAIHEILEKLGY 360
PN +SLVTAL LQK+TEV SHVLMG+PH + PLSPLG+AC R DLTA+ EILEKLGY
Sbjct: 300 PNTKSLVTALTPLQKETEVLSHVLMGLPHSGSVSPLSPLGEACSRRDLTAMLEILEKLGY 359
Query: 361 KDDEGAATE----MWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAF 416
KDDEG E MWT QMQE+LNSKKKGDVAFR KDFR +IECYTQFID G M+SPT
Sbjct: 360 KDDEGVTNELSFHMWTDQMQESLNSKKKGDVAFRQKDFREAIECYTQFID-GGMISPTVC 418
Query: 417 ARRSLSYLMSDMPQEALNDASQAQVISPVWHMXXXXXXXXXXXXGKENEAQAALREASIL 476
ARRSL YLMSDMP+EAL+DA QAQVISPVWH+ G E E+Q AL+E S L
Sbjct: 419 ARRSLCYLMSDMPKEALDDAIQAQVISPVWHVASYLQSASLGILGMEKESQIALKEGSNL 478
Query: 477 ENK 479
E K
Sbjct: 479 EAK 481
|
|
| TAIR|locus:2154538 BSK5 "brassinosteroid-signaling kinase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1746 (619.7 bits), Expect = 7.0e-180, P = 7.0e-180
Identities = 338/491 (68%), Positives = 393/491 (80%)
Query: 1 MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMEN 60
MG CSKLS C + EA D++N G D++P F E+S + LR AT GF+ ++
Sbjct: 1 MGPRCSKLSLCWWPTHLKSTHNEASDLDN----GTDDLPSFTEFSFDQLRAATCGFSTDS 56
Query: 61 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG 120
IVSEHG KAPNVVYKG+LE+ IAVKRFNRSAWPD RQFLEEA+AVGQLRN RLANL+G
Sbjct: 57 IVSEHGVKAPNVVYKGRLEDDRWIAVKRFNRSAWPDTRQFLEEAKAVGQLRNERLANLIG 116
Query: 121 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
CCEGDERLLVAE+MP +TL+KHLFHW++QPMKW+MRLRVAL++A+ALEYC+SK RALYH
Sbjct: 117 FCCEGDERLLVAEFMPFETLSKHLFHWDSQPMKWSMRLRVALYLAQALEYCSSKGRALYH 176
Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240
DLNAYRI+FD D NPRLSCFGLMKNSRDG+SYSTNLAFTPPEYLRTGRV PESV+YSFGT
Sbjct: 177 DLNAYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVIPESVVYSFGT 236
Query: 241 LLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
LLLDLLSGKHIPPSHALDLIR +N L DSCL+G FS+D+GT+LVRLASRCLQYE RER
Sbjct: 237 LLLDLLSGKHIPPSHALDLIRGKNFLMLMDSCLDGHFSNDDGTDLVRLASRCLQYEARER 296
Query: 301 PNPRSLVTALVTLQKDTEVPSHVLMGIPHGAAA----LPLSPLGDACLRMDLTAIHEILE 356
PN +SLV++L LQK+T++PSHVLMGIPHGAA+ L+PLGDAC R DLTAIHEILE
Sbjct: 297 PNVKSLVSSLAPLQKETDIPSHVLMGIPHGAASPKETTSLTPLGDACSRHDLTAIHEILE 356
Query: 357 KLGYKDDEGAATEM----WTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVS 412
K+GYKDDEG A E+ WT Q+QETLNSKK+GD AF+ KDF ++ECYTQFI+ GTMVS
Sbjct: 357 KVGYKDDEGVANELSFQVWTDQIQETLNSKKQGDAAFKGKDFVTAVECYTQFIEDGTMVS 416
Query: 413 PTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMXXXXXXXXXXXXGKENEAQAALRE 472
PT FARR L YLMS+MPQEAL DA QAQV+SP W G + +A L++
Sbjct: 417 PTVFARRCLCYLMSNMPQEALGDAMQAQVVSPEWPTAFYLQAAALFSLGMDKDACETLKD 476
Query: 473 ASILENKKSAN 483
+ LE KK N
Sbjct: 477 GTSLEAKKHNN 487
|
|
| TAIR|locus:2198160 BSK4 "brassinosteroid-signaling kinase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1698 (602.8 bits), Expect = 8.6e-175, P = 8.6e-175
Identities = 330/481 (68%), Positives = 388/481 (80%)
Query: 1 MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMEN 60
MG + SK+ CCS + A EA DVEN+E V+ V F EYS+E L+ ATS FA+EN
Sbjct: 1 MGGQSSKIGTCCS---HKTTALEAPDVENKENGEVNGVHSFREYSLEQLKIATSCFALEN 57
Query: 61 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG 120
+VSEHGE APNVVY+GKLEN +IA+KRF+ +AWPD RQFLEEAR VGQLR++R+ANLLG
Sbjct: 58 VVSEHGETAPNVVYQGKLENHMKIAIKRFSGTAWPDPRQFLEEARLVGQLRSKRMANLLG 117
Query: 121 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
CCEG ERLLVAE+MPN+TLAKHLFHW+T+PMKWAMRLRVAL+I+EALEYC++ LYH
Sbjct: 118 YCCEGGERLLVAEFMPNETLAKHLFHWDTEPMKWAMRLRVALYISEALEYCSNNGHTLYH 177
Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240
DLNAYR++FD++ NPRLS FGLMKNSRDG+SYSTNLAFTPPEYLRTGR+T ESV+YSFGT
Sbjct: 178 DLNAYRVLFDEECNPRLSTFGLMKNSRDGKSYSTNLAFTPPEYLRTGRITAESVIYSFGT 237
Query: 241 LLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
LLLDLL+GKHIPPSHALDLIRDRN+QTLTDSCLEGQFS +GTELVRL S CLQYE RER
Sbjct: 238 LLLDLLTGKHIPPSHALDLIRDRNLQTLTDSCLEGQFSDSDGTELVRLTSCCLQYEARER 297
Query: 301 PNPRSLVTALVTLQKDTEVPSHVLMGIPH-GAAALPLSPLGDACLRMDLTAIHEILEKLG 359
PN +SLVTAL++LQKDTEV SHVLMG+P G A P SP +AC DLT++ EILEK+G
Sbjct: 298 PNIKSLVTALISLQKDTEVLSHVLMGLPQSGTFASPPSPFAEACSGKDLTSMVEILEKIG 357
Query: 360 YKDDEGAATEMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARR 419
YKDDE + MWT QMQE +NSKKKGD+AFR KDF +IE YTQF+D+G M+S T RR
Sbjct: 358 YKDDEDLSF-MWTEQMQEAINSKKKGDIAFRRKDFSEAIEFYTQFLDLG-MISATVLVRR 415
Query: 420 SLSYLMSDMPQEALNDASQAQVISPVWHMXXXXXXXXXXXXGKENEAQAALREASILENK 479
S SYLMS+M +EAL+DA +AQ ISPVW++ G E E+Q AL E SILE +
Sbjct: 416 SQSYLMSNMAKEALDDAMKAQGISPVWYVALYLQSAALSVLGMEKESQIALTEGSILEAR 475
Query: 480 K 480
K
Sbjct: 476 K 476
|
|
| TAIR|locus:2084475 BSK6 "brassinosteroid-signaling kinase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1674 (594.3 bits), Expect = 3.0e-172, P = 3.0e-172
Identities = 329/491 (67%), Positives = 388/491 (79%)
Query: 1 MGCECSKLSACCSGSEYGEAAP-EAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAME 59
MG CSK S C S + A+ E+ D+EN K P F E+ +E L++AT GF+ +
Sbjct: 1 MGARCSKFSFCLFPSHFKSASVLESPDIENGGKVW----PTFKEFKLEQLKSATGGFSSD 56
Query: 60 NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 119
NIVSEHGEKAPNVVY+G+L++ IAVKRFNR AW D RQFL+EA+AVG LR+ RLANL+
Sbjct: 57 NIVSEHGEKAPNVVYRGRLDDGRLIAVKRFNRLAWADHRQFLDEAKAVGSLRSDRLANLI 116
Query: 120 GCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALY 179
GCC EG+ERLLVAE+MP++TLAKHLFHWE PMKWAMRLRVAL +A+ALEYC++K RALY
Sbjct: 117 GCCFEGEERLLVAEFMPHETLAKHLFHWENNPMKWAMRLRVALCLAQALEYCSNKGRALY 176
Query: 180 HDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFG 239
HDLNAYR++FD D NPRLSCFGLMKNSRDG+SYSTNLAFTPPEYLRTGRVTPESV++SFG
Sbjct: 177 HDLNAYRVLFDKDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVVFSFG 236
Query: 240 TLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRE 299
T+LLDL+SGKHIPPSHALDLIR +N L DS LEG FS+++GTELVRLA+RCLQYE RE
Sbjct: 237 TVLLDLMSGKHIPPSHALDLIRGKNCAMLMDSALEGHFSNEDGTELVRLATRCLQYEARE 296
Query: 300 RPNPRSLVTALVTLQKDTEVPSHVLMGIPHGAAA-----LPLSPLGDACLRMDLTAIHEI 354
RPN +SLVT+LVTLQK+++V S+VLMGIPH A L L+P GDACLR+DLTAI EI
Sbjct: 297 RPNVKSLVTSLVTLQKESDVASYVLMGIPHETEAEEESPLSLTPFGDACLRVDLTAIQEI 356
Query: 355 LEKLGYKDDEGAATE----MWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTM 410
L K+GYKDDEG A E MWT QMQE+LNSKK+GD+AFR KDF +++CYTQFID GTM
Sbjct: 357 LSKIGYKDDEGIANELSFQMWTNQMQESLNSKKQGDLAFRSKDFTTAVDCYTQFIDGGTM 416
Query: 411 VSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMXXXXXXXXXXXXGKENEAQAAL 470
VSPT ARR LSYLM+D QEAL DA QAQV+SP W G E +AQ AL
Sbjct: 417 VSPTVHARRCLSYLMNDNAQEALTDALQAQVVSPDWPTALYLQAACLFKLGMEADAQQAL 476
Query: 471 REASILENKKS 481
++ + LE KKS
Sbjct: 477 KDGTTLEAKKS 487
|
|
| TAIR|locus:2122058 BSK1 "brassinosteroid-signaling kinase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1457 (517.9 bits), Expect = 3.0e-149, P = 3.0e-149
Identities = 278/455 (61%), Positives = 345/455 (75%)
Query: 34 GVDNVPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSA 93
G +P F E+S L+ AT+ F+ +NIVSE GEKAPN+VYKG+L+N+ IAVK+F + A
Sbjct: 51 GGGGIPSFSEFSFADLKAATNNFSSDNIVSESGEKAPNLVYKGRLQNRRWIAVKKFTKMA 110
Query: 94 WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMK 153
WP+ +QF EEA VG+LR+ RLANL+G CC+GDERLLVAE+MPNDTLAKHLFHWE Q ++
Sbjct: 111 WPEPKQFAEEAWGVGKLRHNRLANLIGYCCDGDERLLVAEFMPNDTLAKHLFHWENQTIE 170
Query: 154 WAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYS 213
WAMRLRV +IAEAL+YC+++ R LYHDLNAYR++FD+D +PRLSCFGLMKNSRDG+SYS
Sbjct: 171 WAMRLRVGYYIAEALDYCSTEGRPLYHDLNAYRVLFDEDGDPRLSCFGLMKNSRDGKSYS 230
Query: 214 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCL 273
TNLA+TPPEYLR GRVTPESV YSFGT+LLDLLSGKHIPPSHALD+IR +NI L DS L
Sbjct: 231 TNLAYTPPEYLRNGRVTPESVTYSFGTVLLDLLSGKHIPPSHALDMIRGKNIILLMDSHL 290
Query: 274 EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPSHVLMGIPHGAAA 333
EG+FS++E T +V LAS+CLQYEPRERPN + LV L LQ ++VPS+V++GI A
Sbjct: 291 EGKFSTEEATVVVELASQCLQYEPRERPNTKDLVATLAPLQTKSDVPSYVMLGIKKQEEA 350
Query: 334 -----LPLSPLGDACLRMDLTAIHEILEKLGYKDDEGA---ATEMWTGQMQETLNSKKKG 385
PLSPLG+AC RMDLTAIH+IL Y+DDEG + + WT QM++ L+++K+G
Sbjct: 351 PSTPQRPLSPLGEACSRMDLTAIHQILVMTHYRDDEGTNELSFQEWTQQMKDMLDARKRG 410
Query: 386 DVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPV 445
D +FR KDF+ +I+CY+QFIDVGTMVSPT F RRSL YL+ D P AL DA QAQ + P
Sbjct: 411 DQSFREKDFKTAIDCYSQFIDVGTMVSPTVFGRRSLCYLLCDQPDAALRDAMQAQCVYPD 470
Query: 446 WHMXXXXXXXXXXXXGKENEAQAALREASILENKK 480
W +A L EA+ LE K+
Sbjct: 471 WPTAFYMQSVALAKLNMNTDAADMLNEAAQLEEKR 505
|
|
| TAIR|locus:2142315 BSK2 "brassinosteroid-signaling kinase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1391 (494.7 bits), Expect = 2.9e-142, P = 2.9e-142
Identities = 272/487 (55%), Positives = 352/487 (72%)
Query: 1 MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDN-VPVFCEYSIETLRTATSGFAME 59
MGC SK + S + +AP + N ++ VD + F E+ + LR AT+GF+
Sbjct: 1 MGCLHSKTANLPSSDD--PSAPNKPESVNGDQ--VDQEIQNFKEFELNELRKATNGFSPS 56
Query: 60 NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 119
IVSE GEKAPNVVY+GKLE +A+KRF+R +WPDA+QF+ EA VG+LRN+R+ +L+
Sbjct: 57 CIVSEGGEKAPNVVYRGKLEGNHLVAIKRFSRQSWPDAQQFVVEATGVGKLRNKRIVSLI 116
Query: 120 GCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALY 179
GCC EGDERLLVAEYMPNDTL+KHLFHWE QP+ W MR+R+A +IAEAL+YC + R +Y
Sbjct: 117 GCCAEGDERLLVAEYMPNDTLSKHLFHWEKQPLPWDMRVRIADYIAEALDYCNIENRKIY 176
Query: 180 HDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFG 239
HDLNAYRI+FD++ +PRLS FGLMKNSRDG+SYSTNLA+TPPE+LRTGRV PESV++S+G
Sbjct: 177 HDLNAYRILFDEEGDPRLSTFGLMKNSRDGKSYSTNLAYTPPEFLRTGRVIPESVIFSYG 236
Query: 240 TLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRE 299
T+LLDLLSGKHIPPSHALD+IR +N L DS LEGQ+++D+ T+LV LAS+CLQ E ++
Sbjct: 237 TILLDLLSGKHIPPSHALDIIRGKNALLLMDSSLEGQYANDDATKLVDLASKCLQSEAKD 296
Query: 300 RPNPRSLVTALVTLQKDTEVPSHVLMGIPHGAAALP--LSPLGDACLRMDLTAIHEILEK 357
RP+ + L++A+ LQK EV SHVLMG+P LP LSPLG AC +MDL H+IL K
Sbjct: 297 RPDTKFLLSAVAPLQKQEEVASHVLMGLPKNTVILPTMLSPLGKACAKMDLATFHDILLK 356
Query: 358 LGYKDDEGAATEM----WTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSP 413
GY+D+EGA E+ WT Q+QE LN+KK GD+AFR KDF+ SIE Y++ + + + S
Sbjct: 357 TGYRDEEGAENELSFQEWTQQVQEMLNTKKFGDIAFRDKDFKNSIEYYSKLVGMMPVPSA 416
Query: 414 TAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMXXXXXXXXXXXXGKENEAQAALREA 473
T FARR+ SYLM+D + AL DA QAQV P W G E +AQ L +
Sbjct: 417 TVFARRAFSYLMTDQQELALRDAMQAQVCIPEWPTAFYLQALALSKLGMETDAQDMLNDG 476
Query: 474 SILENKK 480
+ + K+
Sbjct: 477 AAYDAKR 483
|
|
| TAIR|locus:2083499 BSK9 "brassinosteroid-signaling kinase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1338 (476.1 bits), Expect = 1.2e-136, P = 1.2e-136
Identities = 267/463 (57%), Positives = 331/463 (71%)
Query: 28 ENEEKPGVDNVPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVK 87
+N+E+ P F E+S+E LR AT GF+ +NIVSEH E+ PN+VYKG+L + +IAVK
Sbjct: 13 DNKEEDEGSTCPNFLEFSLEQLRVATDGFSADNIVSEHNERVPNIVYKGQLNDGRKIAVK 72
Query: 88 RFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHW 147
RF R +WPD+ +F+EEA+AVG+ R+ +ANL+GCC EG ERLLVAEYMPN+TLAKHLFHW
Sbjct: 73 RFQRLSWPDSLEFIEEAQAVGRCRSEHMANLIGCCSEGHERLLVAEYMPNETLAKHLFHW 132
Query: 148 ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 207
E +PMKW MRLRVALH A ALEYC LYHDLN YRI+FD NPRLSCFGLMK SR
Sbjct: 133 EKRPMKWEMRLRVALHTATALEYCNDWGIDLYHDLNTYRILFDKVGNPRLSCFGLMKCSR 192
Query: 208 DGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQT 267
+G+SYSTNLAF PPEYLR G V PESV +SFGTLLLDL+SG+HIPP+HALDL R +N
Sbjct: 193 EGKSYSTNLAFAPPEYLRLGTVIPESVTFSFGTLLLDLMSGRHIPPNHALDLFRGKNYLV 252
Query: 268 LTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV-PSHVLMG 326
L DS L+GQFS ++ TEL+ LASRCL+ EP ERP+ + L++AL L+K E+ P+
Sbjct: 253 LMDSALDGQFSDEDRTELIHLASRCLRPEPDERPSIKFLMSALSRLEKRAELWPNVKEEN 312
Query: 327 IPHGAAA-------LPLSPLGDACLRMDLTAIHEILEKLGYKDDEGAAT-----EMWTGQ 374
IP + LPL+P G+AC R+DL+ +HE+LEKLGY +D+ T +MWTGQ
Sbjct: 313 IPTPSYTEPATKEPLPLTPFGEACWRVDLSGMHELLEKLGYGEDDVVVTNEFSFQMWTGQ 372
Query: 375 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALN 434
MQE ++ KK GD AFR KDF +IE YT+F+ +VSPT ARR L YLMSDM +EAL+
Sbjct: 373 MQENMDYKKHGDAAFRAKDFETAIEFYTEFMSGAPVVSPTVLARRCLCYLMSDMFREALS 432
Query: 435 DASQAQVISPVWHMXXXXXXXXXXXXGKENEAQAALREASILE 477
DA Q QV SP + + G E EA+ ALR S LE
Sbjct: 433 DAMQTQVASPEFSIALYLQAACLLKLGMEAEAKEALRHGSSLE 475
|
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| TAIR|locus:2150074 BSK10 "brassinosteroid-signaling kinase 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1292 (459.9 bits), Expect = 9.1e-132, P = 9.1e-132
Identities = 269/498 (54%), Positives = 331/498 (66%)
Query: 1 MGCECSKLSACCSGSEYGEAAPEAQDVENEEKPGVDN----VP-VFCEYSIETLRTATSG 55
MGC C K S S S + D+EN + D+ P +F E+S+E LR AT G
Sbjct: 1 MGCICFK-SWRRSSSSPSITSTVIDDLENVREYDADDDGGHYPLIFREFSLEQLRIATDG 59
Query: 56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRL 115
F+ NIVSEH + PN+VYKGKL + RIAVKRF R +WPD +F+ EA+AVG+LR+ +
Sbjct: 60 FSAGNIVSEHNDSVPNIVYKGKLGDGRRIAVKRFQRLSWPDPFEFINEAQAVGRLRSEHM 119
Query: 116 ANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE 175
ANL+GCCC+ +ERLLVAEYMPN TLAKHLFHWE +PMKW MRL+VALH A ALEYC K
Sbjct: 120 ANLIGCCCDDNERLLVAEYMPNGTLAKHLFHWEKRPMKWEMRLKVALHTARALEYCNDKG 179
Query: 176 RALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVM 235
LYHDLN YRI+FD P+LSCFGLMKNS +G+ YSTNLAF PPEYLR G V ESV
Sbjct: 180 IDLYHDLNPYRIMFDKTGIPKLSCFGLMKNSHEGKIYSTNLAFAPPEYLRLGTVIAESVT 239
Query: 236 YSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQY 295
+SFGTLLLDL+SG+HIPP+HALDL R +N L DS L+GQFS ++ TEL+ +ASRC +
Sbjct: 240 FSFGTLLLDLMSGRHIPPNHALDLFRGKNYLVLMDSALDGQFSDEDRTELIHVASRCFKT 299
Query: 296 EPRERPNPRSLVTALVTLQKDTEV-PSHVLM-------GIPH----GAAALPLSPLGDAC 343
EP ERP+ + L L LQK ++ P +V +P +L L+P GDAC
Sbjct: 300 EPEERPSIKFLKATLSRLQKRAKLCPINVKRPMSPPSKNLPEKTKPATESLKLTPFGDAC 359
Query: 344 LRMDLTAIHEILEKLGYKDDEGAATE----MWTGQMQETLNSKKKGDVAFRHKDFRASIE 399
R DL++IHE+LEKLGY++D G E MWTG+MQE ++ KK GD AF KDF +IE
Sbjct: 360 SRADLSSIHELLEKLGYEEDNGVGNEFSFQMWTGEMQENMDYKKHGDAAFLAKDFDTAIE 419
Query: 400 CYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMXXXXXXXXXXX 459
YT+F+ VSPT ARR L YLM++M EAL+DA QAQV SP W +
Sbjct: 420 FYTEFMTGAPTVSPTVLARRCLCYLMTEMFSEALSDAMQAQVASPEWPIPLYLQAACLFK 479
Query: 460 XGKENEAQAALREASILE 477
E EA+ ALR S LE
Sbjct: 480 LEMEAEAKEALRHGSALE 497
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9FHD7 | Y5126_ARATH | 2, ., 7, ., 1, 1, ., 1 | 0.7608 | 0.9938 | 0.9876 | no | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | GSVIVG00000416001 | SubName- Full=Chromosome chr2 scaffold_105, whole genome shotgun sequence; (488 aa) | |||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 484 | |||
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 3e-26 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 4e-23 | |
| smart00219 | 257 | smart00219, TyrKc, Tyrosine kinase, catalytic doma | 6e-22 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 5e-21 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 1e-20 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 1e-18 | |
| cd05039 | 256 | cd05039, PTKc_Csk_like, Catalytic domain of C-term | 2e-18 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 3e-17 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 9e-16 | |
| cd05083 | 254 | cd05083, PTKc_Chk, Catalytic domain of the Protein | 3e-15 | |
| cd05085 | 250 | cd05085, PTKc_Fer, Catalytic domain of the Protein | 3e-14 | |
| cd05084 | 252 | cd05084, PTKc_Fes, Catalytic domain of the Protein | 2e-13 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 2e-13 | |
| cd05049 | 280 | cd05049, PTKc_Trk, Catalytic domain of the Protein | 6e-13 | |
| cd05148 | 261 | cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro | 2e-12 | |
| cd05048 | 283 | cd05048, PTKc_Ror, Catalytic Domain of the Protein | 2e-12 | |
| cd05038 | 284 | cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai | 2e-12 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 4e-12 | |
| cd05082 | 256 | cd05082, PTKc_Csk, Catalytic domain of the Protein | 4e-12 | |
| cd05061 | 288 | cd05061, PTKc_InsR, Catalytic domain of the Protei | 5e-12 | |
| cd05067 | 260 | cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro | 5e-12 | |
| cd05059 | 256 | cd05059, PTKc_Tec_like, Catalytic domain of Tec-li | 6e-12 | |
| cd05113 | 256 | cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro | 1e-11 | |
| cd05062 | 277 | cd05062, PTKc_IGF-1R, Catalytic domain of the Prot | 2e-11 | |
| cd05080 | 283 | cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma | 3e-11 | |
| cd05114 | 256 | cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro | 6e-11 | |
| cd05078 | 258 | cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat | 7e-11 | |
| cd05034 | 261 | cd05034, PTKc_Src_like, Catalytic domain of Src ki | 1e-10 | |
| cd05070 | 260 | cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro | 2e-10 | |
| cd05035 | 273 | cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li | 3e-10 | |
| cd05069 | 260 | cd05069, PTKc_Yes, Catalytic domain of the Protein | 3e-10 | |
| cd05071 | 262 | cd05071, PTKc_Src, Catalytic domain of the Protein | 4e-10 | |
| cd05112 | 256 | cd05112, PTKc_Itk, Catalytic domain of the Protein | 5e-10 | |
| cd05072 | 261 | cd05072, PTKc_Lyn, Catalytic domain of the Protein | 5e-10 | |
| cd05093 | 288 | cd05093, PTKc_TrkB, Catalytic domain of the Protei | 2e-09 | |
| cd05052 | 263 | cd05052, PTKc_Abl, Catalytic domain of the Protein | 3e-09 | |
| cd05094 | 291 | cd05094, PTKc_TrkC, Catalytic domain of the Protei | 5e-09 | |
| cd05123 | 250 | cd05123, STKc_AGC, Catalytic domain of AGC family | 6e-09 | |
| cd05033 | 266 | cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec | 8e-09 | |
| cd05032 | 277 | cd05032, PTKc_InsR_like, Catalytic domain of Insul | 1e-08 | |
| cd05068 | 261 | cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re | 1e-08 | |
| cd05075 | 272 | cd05075, PTKc_Axl, Catalytic domain of the Protein | 3e-08 | |
| cd08529 | 256 | cd08529, STKc_FA2-like, Catalytic domain of the Pr | 4e-08 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 4e-08 | |
| cd08217 | 265 | cd08217, STKc_Nek2, Catalytic domain of the Protei | 4e-08 | |
| cd05037 | 259 | cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom | 7e-08 | |
| cd05097 | 295 | cd05097, PTKc_DDR_like, Catalytic domain of Discoi | 1e-07 | |
| cd05096 | 304 | cd05096, PTKc_DDR1, Catalytic domain of the Protei | 1e-07 | |
| cd05045 | 290 | cd05045, PTKc_RET, Catalytic domain of the Protein | 2e-07 | |
| cd05064 | 266 | cd05064, PTKc_EphR_A10, Catalytic domain of the Pr | 3e-07 | |
| cd05058 | 262 | cd05058, PTKc_Met_Ron, Catalytic domain of the Pro | 4e-07 | |
| cd05073 | 260 | cd05073, PTKc_Hck, Catalytic domain of the Protein | 4e-07 | |
| cd00189 | 100 | cd00189, TPR, Tetratricopeptide repeat domain; typ | 4e-07 | |
| cd05050 | 288 | cd05050, PTKc_Musk, Catalytic domain of the Protei | 5e-07 | |
| cd05090 | 283 | cd05090, PTKc_Ror1, Catalytic domain of the Protei | 7e-07 | |
| cd05044 | 269 | cd05044, PTKc_c-ros, Catalytic domain of the Prote | 1e-06 | |
| cd05077 | 262 | cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) do | 1e-06 | |
| cd05063 | 268 | cd05063, PTKc_EphR_A2, Catalytic domain of the Pro | 2e-06 | |
| cd05076 | 274 | cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) do | 2e-06 | |
| cd05060 | 257 | cd05060, PTKc_Syk_like, Catalytic domain of Spleen | 2e-06 | |
| cd05040 | 257 | cd05040, PTKc_Ack_like, Catalytic domain of the Pr | 3e-06 | |
| cd05092 | 280 | cd05092, PTKc_TrkA, Catalytic domain of the Protei | 3e-06 | |
| cd05100 | 334 | cd05100, PTKc_FGFR3, Catalytic domain of the Prote | 5e-06 | |
| cd05036 | 277 | cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro | 6e-06 | |
| cd05056 | 270 | cd05056, PTKc_FAK, Catalytic domain of the Protein | 6e-06 | |
| cd06610 | 267 | cd06610, STKc_OSR1_SPAK, Catalytic domain of the P | 1e-05 | |
| cd05046 | 275 | cd05046, PTK_CCK4, Pseudokinase domain of the Prot | 3e-05 | |
| cd05065 | 269 | cd05065, PTKc_EphR_B, Catalytic domain of the Prot | 5e-05 | |
| cd06642 | 277 | cd06642, STKc_STK25-YSK1, Catalytic domain of the | 5e-05 | |
| cd05095 | 296 | cd05095, PTKc_DDR2, Catalytic domain of the Protei | 6e-05 | |
| cd06655 | 296 | cd06655, STKc_PAK2, Catalytic domain of the Protei | 1e-04 | |
| cd05630 | 285 | cd05630, STKc_GRK6, Catalytic domain of the Protei | 1e-04 | |
| cd05081 | 284 | cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) | 1e-04 | |
| PLN03088 | 356 | PLN03088, PLN03088, SGT1, suppressor of G2 allele | 1e-04 | |
| cd05101 | 304 | cd05101, PTKc_FGFR2, Catalytic domain of the Prote | 1e-04 | |
| cd05098 | 307 | cd05098, PTKc_FGFR1, Catalytic domain of the Prote | 1e-04 | |
| pfam13414 | 69 | pfam13414, TPR_11, TPR repeat | 1e-04 | |
| cd05057 | 279 | cd05057, PTKc_EGFR_like, Catalytic domain of Epide | 2e-04 | |
| cd05110 | 303 | cd05110, PTKc_HER4, Catalytic domain of the Protei | 2e-04 | |
| cd05066 | 267 | cd05066, PTKc_EphR_A, Catalytic domain of the Prot | 2e-04 | |
| cd06620 | 284 | cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of | 4e-04 | |
| cd07840 | 287 | cd07840, STKc_CDK9_like, Catalytic domain of Cycli | 4e-04 | |
| cd05099 | 314 | cd05099, PTKc_FGFR4, Catalytic domain of the Prote | 4e-04 | |
| cd05079 | 284 | cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma | 4e-04 | |
| cd06654 | 296 | cd06654, STKc_PAK1, Catalytic domain of the Protei | 5e-04 | |
| cd06656 | 297 | cd06656, STKc_PAK3, Catalytic domain of the Protei | 6e-04 | |
| cd05576 | 237 | cd05576, STKc_RPK118_like, Catalytic domain of the | 6e-04 | |
| cd05055 | 302 | cd05055, PTKc_PDGFR, Catalytic domain of the Prote | 0.001 | |
| cd05042 | 269 | cd05042, PTKc_Aatyk, Catalytic domain of the Prote | 0.001 | |
| cd06624 | 268 | cd06624, STKc_ASK, Catalytic domain of the Protein | 0.001 | |
| cd05091 | 283 | cd05091, PTKc_Ror2, Catalytic domain of the Protei | 0.001 | |
| cd05577 | 277 | cd05577, STKc_GRK, Catalytic domain of the Protein | 0.001 | |
| cd05053 | 293 | cd05053, PTKc_FGFR, Catalytic domain of the Protei | 0.002 | |
| cd05109 | 279 | cd05109, PTKc_HER2, Catalytic domain of the Protei | 0.002 | |
| cd05612 | 291 | cd05612, STKc_PRKX_like, Catalytic domain of PRKX- | 0.002 | |
| cd06647 | 293 | cd06647, STKc_PAK_I, Catalytic domain of the Prote | 0.003 | |
| cd06612 | 256 | cd06612, STKc_MST1_2, Catalytic domain of the Prot | 0.003 | |
| cd05590 | 320 | cd05590, STKc_nPKC_eta, Catalytic domain of the Pr | 0.004 | |
| cd05051 | 296 | cd05051, PTKc_DDR, Catalytic domain of the Protein | 0.004 | |
| cd05583 | 288 | cd05583, STKc_MSK_N, N-terminal catalytic domain o | 0.004 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 105 bits (265), Expect = 3e-26
Identities = 55/245 (22%), Positives = 91/245 (37%), Gaps = 49/245 (20%)
Query: 72 VVYKGK-LENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDERL 129
VY + + ++A+K + + L E + +L + + L G + +
Sbjct: 8 TVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLY 67
Query: 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRI- 187
LV EY +L L E + LR+ L I E LEY S + H DL I
Sbjct: 68 LVMEYCEGGSLKDLLKENE-GKLSEDEILRILLQILEGLEYLHSNG--IIHRDLKPENIL 124
Query: 188 VFDDDVNPRLSCFGLMKNSRDGRSYST----NLAFTPPEYLR-TGRVTPESVMYSFGTLL 242
+ D+ +L+ FGL K +S A+ PE L G + +S ++S G +L
Sbjct: 125 LDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVIL 184
Query: 243 LDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPN 302
+L DLIR + LQ +P +RP+
Sbjct: 185 YEL--------PELKDLIR-----------------------------KMLQKDPEKRPS 207
Query: 303 PRSLV 307
+ ++
Sbjct: 208 AKEIL 212
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 98.0 bits (245), Expect = 4e-23
Identities = 71/260 (27%), Positives = 114/260 (43%), Gaps = 36/260 (13%)
Query: 72 VVYKGKL-----ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEG 125
VYKG L + +AVK A + FL EAR + +L + + LLG C E
Sbjct: 14 EVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNIVKLLGVCTEE 73
Query: 126 DERLLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH- 180
+ ++V EYMP D L K+ + + + L AL IA +EY SK H
Sbjct: 74 EPLMIVMEYMPGGDLLDYLRKN----RPKELSLSDLLSFALQIARGMEYLESKN--FIHR 127
Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVM 235
DL A + +++ ++S FGL ++ D Y + PE L+ G+ T +S +
Sbjct: 128 DLAARNCLVGENLVVKISDFGLSRDLYDDDYYKVKGGKLPIRWMAPESLKEGKFTSKSDV 187
Query: 236 YSFGTLLLDLLS-GK----HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290
+SFG LL ++ + G+ + + L+ ++ +C EL +L
Sbjct: 188 WSFGVLLWEIFTLGEEPYPGMSNAEVLEYLKKGYRLPKPPNCPP---------ELYKLML 238
Query: 291 RCLQYEPRERPNPRSLVTAL 310
+C +P +RP LV L
Sbjct: 239 QCWAEDPEDRPTFSELVEIL 258
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Score = 94.5 bits (236), Expect = 6e-22
Identities = 70/260 (26%), Positives = 111/260 (42%), Gaps = 37/260 (14%)
Query: 72 VVYKGKLE-----NQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEG 125
VYKGKL+ + +AVK A + FL EAR + +L + + LLG C E
Sbjct: 14 EVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKLDHPNVVKLLGVCTEE 73
Query: 126 DERLLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH- 180
+ +V EYM L K+ + + L AL IA +EY SK H
Sbjct: 74 EPLYIVMEYMEGGDLLSYLRKN-----RPKLSLSDLLSFALQIARGMEYLESKN--FIHR 126
Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVM 235
DL A + +++ ++S FGL ++ D Y + PE L+ G+ T +S +
Sbjct: 127 DLAARNCLVGENLVVKISDFGLSRDLYDDDYYRKRGGKLPIRWMAPESLKEGKFTSKSDV 186
Query: 236 YSFGTLLLDLLS-GK----HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290
+SFG LL ++ + G+ + L+ +++ +C EL L
Sbjct: 187 WSFGVLLWEIFTLGEQPYPGMSNEEVLEYLKNGYRLPQPPNCPP---------ELYDLML 237
Query: 291 RCLQYEPRERPNPRSLVTAL 310
+C +P +RP LV L
Sbjct: 238 QCWAEDPEDRPTFSELVEIL 257
|
Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 92.2 bits (230), Expect = 5e-21
Identities = 74/262 (28%), Positives = 113/262 (43%), Gaps = 33/262 (12%)
Query: 72 VVYKGKL----ENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLLGCCCEGD 126
VYKGKL +AVK A + R FL+EAR + +L + + LLG C E +
Sbjct: 10 EVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEE 69
Query: 127 ERLLVAEYMPNDTLAKHL-------FHWETQPMKWAMRLRVALHIAEALEYCTSKERALY 179
LV EYM L +L E + L A+ IA+ +EY SK + ++
Sbjct: 70 PLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK-KFVH 128
Query: 180 HDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPES 233
DL A + +D+ ++S FGL ++ D Y + + PE L+ G T +S
Sbjct: 129 RDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKS 188
Query: 234 VMYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288
++SFG LL ++ + G + L+ +R + C + EL L
Sbjct: 189 DVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYRLPKPEYCPD---------ELYEL 239
Query: 289 ASRCLQYEPRERPNPRSLVTAL 310
C Q +P +RP LV L
Sbjct: 240 MLSCWQLDPEDRPTFSELVERL 261
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 91.0 bits (227), Expect = 1e-20
Identities = 73/257 (28%), Positives = 116/257 (45%), Gaps = 30/257 (11%)
Query: 72 VVYKGKL-----ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEG 125
VYKG L + ++AVK A + R+ FLEEA + +L + + LLG C +G
Sbjct: 14 EVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSHPNIVRLLGVCTQG 73
Query: 126 DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNA 184
+ +V EYMP L L + + L++AL IA+ +EY SK H DL A
Sbjct: 74 EPLYIVTEYMPGGDLLDFL-RKHGEKLTLKDLLQMALQIAKGMEYLESKN--FVHRDLAA 130
Query: 185 YRIVFDDDVNPRLSCFGLMKN-SRDGRSYSTNLAFTP-----PEYLRTGRVTPESVMYSF 238
+ +++ ++S FGL ++ D P PE L+ G+ T +S ++SF
Sbjct: 131 RNCLVTENLVVKISDFGLSRDIYEDDYYRKRGGGKLPIKWMAPESLKDGKFTSKSDVWSF 190
Query: 239 GTLLLDLLSG-----KHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 293
G LL ++ + + L+L+ D ++C + EL L +C
Sbjct: 191 GVLLWEIFTLGEQPYPGMSNEEVLELLEDGYRLPRPENCPD---------ELYELMLQCW 241
Query: 294 QYEPRERPNPRSLVTAL 310
Y+P +RP LV L
Sbjct: 242 AYDPEDRPTFSELVEDL 258
|
Length = 258 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 85.4 bits (212), Expect = 1e-18
Identities = 62/247 (25%), Positives = 96/247 (38%), Gaps = 16/247 (6%)
Query: 72 VVYKGKLEN-QFRIAVKRFNRS--AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER 128
VYK K + +AVK + + E R + +L + + L+ + D
Sbjct: 14 TVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNIVRLIDAFEDKDHL 73
Query: 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRI 187
LV EY L +L P+ ++AL I LEY S + H DL I
Sbjct: 74 YLVMEYCEGGDLFDYLS--RGGPLSEDEAKKIALQILRGLEYLHS--NGIIHRDLKPENI 129
Query: 188 VFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGR-VTPESVMYSFGTLL 242
+ D++ +++ FGL K S T TP PE L G P+ ++S G +L
Sbjct: 130 LLDENGVVKIADFGLAKKLLKSSSSLTTFVGTPWYMAPEVLLGGNGYGPKVDVWSLGVIL 189
Query: 243 LDLLSGKHIPPSHALD--LIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
+LL+GK + L R I + S E L +CL +P +R
Sbjct: 190 YELLTGKPPFSGENILDQLQLIRRILG-PPLEFDEPKWSSGSEEAKDLIKKCLNKDPSKR 248
Query: 301 PNPRSLV 307
P ++
Sbjct: 249 PTAEEIL 255
|
Length = 260 |
| >gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 84.4 bits (209), Expect = 2e-18
Identities = 55/181 (30%), Positives = 90/181 (49%), Gaps = 4/181 (2%)
Query: 73 VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132
V G Q ++AVK + A+ FL EA + LR+ L LLG +G+ +V
Sbjct: 22 VMLGDYRGQ-KVAVKCLKDDS-TAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVT 79
Query: 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 192
EYM +L +L + A +L AL + E +EY K ++ DL A ++ +D
Sbjct: 80 EYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKN-FVHRDLAARNVLVSED 138
Query: 193 VNPRLSCFGLMKNSRDGRSYST-NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHI 251
+ ++S FGL K + G+ + +T PE LR + + +S ++SFG LL ++ S +
Sbjct: 139 LVAKVSDFGLAKEASQGQDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRV 198
Query: 252 P 252
P
Sbjct: 199 P 199
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 81.0 bits (200), Expect = 3e-17
Identities = 65/239 (27%), Positives = 108/239 (45%), Gaps = 19/239 (7%)
Query: 73 VYKGKLENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
VYKG L+ +AVK + PD ++ FL+EA + Q + + L+G C + +V
Sbjct: 11 VYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIV 70
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
E +P +L L + + + L+++L A +EY SK ++ DL A + +
Sbjct: 71 MELVPGGSLLTFLRKKKNR-LTVKKLLQMSLDAAAGMEYLESKN-CIHRDLAARNCLVGE 128
Query: 192 DVNPRLSCFGLMKNSRDGRSYSTN-------LAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
+ ++S FG M +G Y+ + + +T PE L GR T ES ++S+G LL +
Sbjct: 129 NNVLKISDFG-MSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWE 187
Query: 245 LLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT--ELVRLASRCLQYEPRERP 301
S P N QT + + + E+ RL +C Y+P RP
Sbjct: 188 TFSLGDTPYPGM------SNQQTRERIESGYRMPAPQLCPEEIYRLMLQCWAYDPENRP 240
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 76.8 bits (190), Expect = 9e-16
Identities = 51/252 (20%), Positives = 84/252 (33%), Gaps = 34/252 (13%)
Query: 72 VVYKGK-LENQFRIAVKRFNRS-AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129
VY + + +A+K + D + L E + + +L++ + L + D+
Sbjct: 14 KVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIVRLYDVFEDEDKLY 73
Query: 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLN-AYR-- 186
LV EY L L A I ALEY H +R
Sbjct: 74 LVMEYCEGGDLFDLLKKRGRLSEDEA--RFYLRQILSALEYL--------HSKGIVHRDL 123
Query: 187 ----IVFDDDVNPRLSCFGLMKNSRDGRSYSTN---LAFTPPEYLRTGRVTPESVMYSFG 239
I+ D+D + +L+ FGL + G +T + PE L ++S G
Sbjct: 124 KPENILLDEDGHVKLADFGLARQLDPGEKLTTFVGTPEYMAPEVLLGKGYGKAVDIWSLG 183
Query: 240 TLLLDLLSGK-----HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ 294
+L +LL+GK I S E +L+R + L
Sbjct: 184 VILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWD----ISPEAKDLIR---KLLV 236
Query: 295 YEPRERPNPRSL 306
+P +R
Sbjct: 237 KDPEKRLTAEEA 248
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Score = 75.0 bits (184), Expect = 3e-15
Identities = 67/251 (26%), Positives = 118/251 (47%), Gaps = 20/251 (7%)
Query: 66 GEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEG 125
GE V +G+ Q ++AVK N A+ FLEE + +L ++ L LLG
Sbjct: 15 GEGEFGAVLQGEYTGQ-KVAVK--NIKCDVTAQAFLEETAVMTKLHHKNLVRLLGVILH- 70
Query: 126 DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAY 185
+ +V E M L L + L+ +L +AE +EY SK + ++ DL A
Sbjct: 71 NGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESK-KLVHRDLAAR 129
Query: 186 RIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
I+ +D ++S FGL + S + + +T PE L+ + + +S ++S+G LL +
Sbjct: 130 NILVSEDGVAKVSDFGLARVGSMGVDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWE 189
Query: 245 LLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD--EG--TELVRLASRCLQYEPRE 299
+ S G+ P +L +++ C+E + + EG ++ L + C + EP++
Sbjct: 190 VFSYGRAPYPKMSLKEVKE---------CVEKGYRMEPPEGCPADVYVLMTSCWETEPKK 240
Query: 300 RPNPRSLVTAL 310
RP+ L L
Sbjct: 241 RPSFHKLREKL 251
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254 |
| >gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Score = 72.0 bits (176), Expect = 3e-14
Identities = 63/236 (26%), Positives = 107/236 (45%), Gaps = 14/236 (5%)
Query: 73 VYKGKLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
V+KG L+++ +AVK + + +FL EAR + Q + + L+G C + +V
Sbjct: 11 VFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIV 70
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
E +P L + +K ++ AL A + Y SK ++ DL A + +
Sbjct: 71 MELVPGGDFLSFL-RKKKDELKTKQLVKFALDAAAGMAYLESKN-CIHRDLAARNCLVGE 128
Query: 192 DVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGTLLLDLL 246
+ ++S FG+ + DG S+ L +T PE L GR + ES ++S+G LL +
Sbjct: 129 NNVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETF 188
Query: 247 SGKHIP-PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 301
S P P R++ + SC Q D ++ ++ RC Y+P RP
Sbjct: 189 SLGVCPYPGMTNQQAREQVEKGYRMSC--PQKCPD---DVYKVMQRCWDYKPENRP 239
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250 |
| >gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Score = 70.0 bits (171), Expect = 2e-13
Identities = 63/253 (24%), Positives = 113/253 (44%), Gaps = 24/253 (9%)
Query: 73 VYKGKLE-NQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130
V+ G+L + +AVK + PD + +FL+EAR + Q + + L+G C + +
Sbjct: 11 VFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYI 70
Query: 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD 190
V E + L E +K +++ + A +EY SK ++ DL A +
Sbjct: 71 VMELVQGGDFLTFL-RTEGPRLKVKELIQMVENAAAGMEYLESKH-CIHRDLAARNCLVT 128
Query: 191 DDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
+ ++S FG+ + DG ST + +T PE L GR + ES ++SFG LL +
Sbjct: 129 EKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWE 188
Query: 245 LLSGKHIPPSHALDLIRDRNIQT-----LTDSCLEGQFSSDEGTELVRLASRCLQYEPRE 299
S +P ++ + I+ + C + + RL RC +Y+P +
Sbjct: 189 AFSLGAVPYANLSNQQTREAIEQGVRLPCPELCPD---------AVYRLMERCWEYDPGQ 239
Query: 300 RPNPRSLVTALVT 312
RP+ ++ L +
Sbjct: 240 RPSFSTVHQELQS 252
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 72.6 bits (178), Expect = 2e-13
Identities = 69/292 (23%), Positives = 124/292 (42%), Gaps = 42/292 (14%)
Query: 48 TLRTATSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARA 106
T+ S EN++S + A YKGK ++N + VK N + + +
Sbjct: 684 TINDILSSLKEENVISRGKKGAS---YKGKSIKNGMQFVVKEINDVNSIPSSEIAD---- 736
Query: 107 VGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAE 166
+G+L++ + L+G C L+ EY+ L++ L + + W R ++A+ IA+
Sbjct: 737 MGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVL-----RNLSWERRRKIAIGIAK 791
Query: 167 ALEY--CTSKERALYHDLNAYRIVFDDDVNPRLSCFGL-----MKNSRDGRSYSTNLAFT 219
AL + C + +L+ +I+ D P L L S A+
Sbjct: 792 ALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHL-RLSLPGLLCTDTKCFISS-----AYV 845
Query: 220 PPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHA--------LDLIR----DRNIQT 267
PE T +T +S +Y FG +L++LL+GK P+ A ++ R D ++
Sbjct: 846 APETRETKDITEKSDIYGFGLILIELLTGKS--PADAEFGVHGSIVEWARYCYSDCHLDM 903
Query: 268 LTDSCLEGQFSSD--EGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317
D + G S + E E++ LA C +P RP ++ L + + +
Sbjct: 904 WIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRSS 955
|
Length = 968 |
| >gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Score = 68.6 bits (168), Expect = 6e-13
Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 37/220 (16%)
Query: 61 IVSEHGEKAPNVVYKGKLEN------QFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNR 113
+ E GE A V+ G+ + + +AVK +A DAR+ F EA + ++
Sbjct: 9 LKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHE 68
Query: 114 RLANLLGCCCEGDERLLVAEYMPNDTLAKHL------------FHWETQPMKWAMRLRVA 161
+ G C EGD ++V EYM + L K L + + L++A
Sbjct: 69 NIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIA 128
Query: 162 LHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------ 215
+ IA + Y S + ++ DL + D+ ++ FG+ SRD Y+T+
Sbjct: 129 VQIASGMVYLAS-QHFVHRDLATRNCLVGYDLVVKIGDFGM---SRD--VYTTDYYRVGG 182
Query: 216 -----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GK 249
+ + PPE + + T ES ++SFG +L ++ + GK
Sbjct: 183 HTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGK 222
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280 |
| >gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Score = 67.1 bits (164), Expect = 2e-12
Identities = 56/243 (23%), Positives = 110/243 (45%), Gaps = 19/243 (7%)
Query: 73 VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132
V++G +N+ R+A+K + F +E +A+ +LR++ L +L C G+ ++
Sbjct: 22 VWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIIT 81
Query: 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 192
E M +L L E Q + A + +A +AE + Y + +++ DL A I+ +D
Sbjct: 82 ELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQ-NSIHRDLAARNILVGED 140
Query: 193 VNPRLSCFGLMKNSRDG--RSYSTNLAF--TPPEYLRTGRVTPESVMYSFGTLLLDLLSG 248
+ +++ FGL + ++ S + + T PE G + +S ++SFG LL ++ +
Sbjct: 141 LVCKVADFGLARLIKEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTY 200
Query: 249 KHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNP 303
+P D I C + E+ ++ C EP +RP+
Sbjct: 201 GQVPYPGMNNHEVYDQITAGYRMPCPAKCPQ---------EIYKIMLECWAAEPEDRPSF 251
Query: 304 RSL 306
++L
Sbjct: 252 KAL 254
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261 |
| >gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Score = 67.1 bits (164), Expect = 2e-12
Identities = 69/297 (23%), Positives = 120/297 (40%), Gaps = 54/297 (18%)
Query: 56 FAMENI--VSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAWPDARQ-FLEEARA 106
+ + + E GE A VYKG+L + +A+K +A P +Q F +EA
Sbjct: 2 IPLSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAEL 61
Query: 107 VGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLF-------------HWETQPMK 153
+ L++ + LLG C + ++ EY+ + L + L +
Sbjct: 62 MSDLQHPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSL 121
Query: 154 WAMR-LRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY 212
L +A+ IA +EY +S ++ DL A + + + ++S FGL SRD Y
Sbjct: 122 DCSDFLHIAIQIAAGMEYLSSHH-FVHRDLAARNCLVGEGLTVKISDFGL---SRDI--Y 175
Query: 213 STN-----------LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHA 256
S + + + PPE + G+ T ES ++SFG +L ++ S P
Sbjct: 176 SADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEV 235
Query: 257 LDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL 313
+++IR R + + C + L C P RP + + T L +
Sbjct: 236 IEMIRSRQLLPCPEDC---------PARVYALMIECWNEIPARRPRFKDIHTRLRSW 283
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283 |
| >gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 67.0 bits (164), Expect = 2e-12
Identities = 68/269 (25%), Positives = 114/269 (42%), Gaps = 33/269 (12%)
Query: 73 VYKGKLENQF-----RIAVKRFNRSAWPDARQFLEEARAVGQLRN---RRLANLLGCCCE 124
V + + ++AVK N S R E R + LR + G C +
Sbjct: 20 VELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFE--REIEILRTLDHENIVKYKGVCEK 77
Query: 125 GDER--LLVAEYMPNDTLAKHL-FHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHD 181
R L+ EY+P+ +L +L H + +K L + I + ++Y S+ R ++ D
Sbjct: 78 PGGRSLRLIMEYLPSGSLRDYLQRHRDQINLK--RLLLFSSQICKGMDYLGSQ-RYIHRD 134
Query: 182 LNAYRIVFDDDVNPRLSCFGLMK--NSRDGRSYSTNLAFTP-----PEYLRTGRVTPESV 234
L A I+ + + ++S FGL K Y +P PE LRT + + S
Sbjct: 135 LAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASD 194
Query: 235 MYSFGTLLLDLLS-GKH--IPPSHALDLI---RDRNIQT-LTDSCLEGQ-FSSDEG--TE 284
++SFG L +L + G PP+ L +I + + I T L + EG+ E
Sbjct: 195 VWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLPRPPSCPDE 254
Query: 285 LVRLASRCLQYEPRERPNPRSLVTALVTL 313
+ L C + EP++RP+ L+ + L
Sbjct: 255 VYDLMKLCWEAEPQDRPSFADLILIVDRL 283
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 67.5 bits (163), Expect = 4e-12
Identities = 58/274 (21%), Positives = 95/274 (34%), Gaps = 29/274 (10%)
Query: 60 NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD---ARQFLEEARAVGQLR-NRRL 115
I+ + GE + VY + ++ +A+K + +FL E + + L +
Sbjct: 3 RILRKLGEGSFGEVYLAR--DRKLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNI 60
Query: 116 ANLLGCCCEGDERLLVAEYMPNDTLAKHL-FHWETQPMKWAMRLRVALHIAEALEYCTSK 174
L + LV EY+ +L L P+ + L + I ALEY SK
Sbjct: 61 VKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK 120
Query: 175 ERALYHDLNAYRIVFD-DDVNPRLSCFGLMKNSRDGRSYSTN----------LAFTPPEY 223
++ D+ I+ D D +L FGL K D S S+ + PE
Sbjct: 121 -GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEV 179
Query: 224 LR---TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD---RNIQTLTDSCLEGQF 277
L + S ++S G L +LL+G + I L L
Sbjct: 180 LLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPL 239
Query: 278 SSDEG----TELVRLASRCLQYEPRERPNPRSLV 307
S L + L +P+ R + S +
Sbjct: 240 SPSNPELISKAASDLLKKLLAKDPKNRLSSSSDL 273
|
Length = 384 |
| >gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Score = 65.8 bits (160), Expect = 4e-12
Identities = 54/181 (29%), Positives = 88/181 (48%), Gaps = 10/181 (5%)
Query: 74 YKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL-LVA 132
Y+G ++AVK A A+ FL EA + QLR+ L LLG E L +V
Sbjct: 27 YRGN-----KVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 79
Query: 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 192
EYM +L +L + L+ +L + EA+EY + ++ DL A ++ +D
Sbjct: 80 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANN-FVHRDLAARNVLVSED 138
Query: 193 VNPRLSCFGLMKNSRDGRSYST-NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHI 251
++S FGL K + + + +T PE LR + + +S ++SFG LL ++ S +
Sbjct: 139 NVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRV 198
Query: 252 P 252
P
Sbjct: 199 P 199
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256 |
| >gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Score = 66.1 bits (161), Expect = 5e-12
Identities = 71/277 (25%), Positives = 114/277 (41%), Gaps = 36/277 (12%)
Query: 60 NIVSEHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRN 112
++ E G+ + +VY+G K E + R+AVK N SA R +FL EA +
Sbjct: 9 TLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTC 68
Query: 113 RRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHW----ETQPMKWAMRLR----VALHI 164
+ LLG +G L+V E M + L +L E P + L+ +A I
Sbjct: 69 HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 128
Query: 165 AEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAF 218
A+ + Y +K + ++ DL A + D ++ FG+ ++ R G + +
Sbjct: 129 ADGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW 187
Query: 219 TPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCL 273
PE L+ G T S M+SFG +L ++ S P L + D D+C
Sbjct: 188 MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCP 247
Query: 274 EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
E + L C Q+ P+ RP +V L
Sbjct: 248 E---------RVTDLMRMCWQFNPKMRPTFLEIVNLL 275
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288 |
| >gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Score = 65.6 bits (160), Expect = 5e-12
Identities = 62/242 (25%), Positives = 110/242 (45%), Gaps = 28/242 (11%)
Query: 73 VYKGKLENQFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
V+ G ++A+K + S P+A FL EA + QL++ RL L + + ++
Sbjct: 22 VWMGYYNGHTKVAIKSLKQGSMSPEA--FLAEANLMKQLQHPRLVRLYAVVTQ-EPIYII 78
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
EYM N +L L E + + +A IAE + + K ++ DL A I+ +
Sbjct: 79 TEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKN-YIHRDLRAANILVSE 137
Query: 192 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
+ +++ FGL + +R+G + + +T PE + G T +S ++SFG LL +
Sbjct: 138 TLCCKIADFGLARLIEDNEYTAREGAKFP--IKWTAPEAINYGTFTIKSDVWSFGILLTE 195
Query: 245 LLSGKHIPPSHALDLIRDRNIQTL-----TDSCLEGQFSSDEGTELVRLASRCLQYEPRE 299
+++ IP + +N++ D+C E EL L C + +P E
Sbjct: 196 IVTYGRIPYPGMTNPEVIQNLERGYRMPRPDNCPE---------ELYELMRLCWKEKPEE 246
Query: 300 RP 301
RP
Sbjct: 247 RP 248
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260 |
| >gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 65.2 bits (159), Expect = 6e-12
Identities = 65/260 (25%), Positives = 113/260 (43%), Gaps = 24/260 (9%)
Query: 62 VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGC 121
+ E G VV+ GK + +A+K A + F+EEA+ + +L + L L G
Sbjct: 9 LKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSE-DDFIEEAKVMMKLSHPNLVQLYGV 67
Query: 122 CCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMR--LRVALHIAEALEYCTSKERALY 179
C + +V EYM N L +L + K L + + EA+EY S ++
Sbjct: 68 CTKQRPIFIVTEYMANGCLLNYL---RERKGKLGTEWLLDMCSDVCEAMEYLESNG-FIH 123
Query: 180 HDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN-----LAFTPPEYLRTGRVTPESV 234
DL A + +D ++S FGL + D + S+ + + PPE R + +S
Sbjct: 124 RDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSD 183
Query: 235 MYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE----GTELVRLAS 290
++SFG L+ ++ S +P R N + + +S G + TE+ +
Sbjct: 184 VWSFGVLMWEVFSEGKMPYE------RFSNSEVV-ESVSAG-YRLYRPKLAPTEVYTIMY 235
Query: 291 RCLQYEPRERPNPRSLVTAL 310
C +P +RP + L++ L
Sbjct: 236 SCWHEKPEDRPAFKKLLSQL 255
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256 |
| >gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Score = 64.1 bits (156), Expect = 1e-11
Identities = 58/256 (22%), Positives = 115/256 (44%), Gaps = 34/256 (13%)
Query: 72 VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
VV GK Q+ +A+K + + +F+EEA+ + +L + +L L G C + +V
Sbjct: 19 VVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIV 77
Query: 132 AEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRI 187
EYM N + L +H ++ + L + + E + Y SK+ ++ DL A
Sbjct: 78 TEYMSNGCLLNYLREHGKRFQPSQL-----LEMCKDVCEGMAYLESKQ-FIHRDLAARNC 131
Query: 188 VFDDDVNPRLSCFGLMKNSRDGRSYST-----NLAFTPPEYLRTGRVTPESVMYSFGTLL 242
+ DD ++S FGL + D S+ + ++PPE L + + +S +++FG L+
Sbjct: 132 LVDDQGCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLM 191
Query: 243 LDLLSGKHIPPSHALDLIRDR-NIQTLTDSCLEG------QFSSDEGTELVRLASRCLQY 295
++ S +P +R N + +G +S+ ++ + C
Sbjct: 192 WEVYSLGKMP--------YERFNNSETVEKVSQGLRLYRPHLASE---KVYAIMYSCWHE 240
Query: 296 EPRERPNPRSLVTALV 311
+ ERP + L++++
Sbjct: 241 KAEERPTFQQLLSSIE 256
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256 |
| >gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Score = 64.3 bits (156), Expect = 2e-11
Identities = 64/273 (23%), Positives = 120/273 (43%), Gaps = 36/273 (13%)
Query: 64 EHGEKAPNVVYKG------KLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLA 116
E G+ + +VY+G K E + R+A+K N +A R +FL EA + + +
Sbjct: 13 ELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 72
Query: 117 NLLGCCCEGDERLLVAEYMPNDTLAKHL--FHWETQ------PMKWAMRLRVALHIAEAL 168
LLG +G L++ E M L +L E + P +++A IA+ +
Sbjct: 73 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGM 132
Query: 169 EYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFTPPE 222
Y + + ++ DL A + +D ++ FG+ ++ R G + + PE
Sbjct: 133 AYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 191
Query: 223 YLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQF 277
L+ G T S ++SFG +L ++ + P L + + + D+C + F
Sbjct: 192 SLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGGLLDKPDNCPDMLF 251
Query: 278 SSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
EL+R+ C QY P+ RP+ +++++
Sbjct: 252 ------ELMRM---CWQYNPKMRPSFLEIISSI 275
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277 |
| >gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 63.8 bits (155), Expect = 3e-11
Identities = 60/250 (24%), Positives = 102/250 (40%), Gaps = 24/250 (9%)
Query: 84 IAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMPNDTL 140
+AVK R + +E + L + + GCC E + L+ EY+P +L
Sbjct: 36 VAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLIMEYVPLGSL 95
Query: 141 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCF 200
+L + A L A I E + Y S+ ++ DL A ++ D+D ++ F
Sbjct: 96 RDYL---PKHKLNLAQLLLFAQQICEGMAYLHSQ-HYIHRDLAARNVLLDNDRLVKIGDF 151
Query: 201 GLMKNSRDGRSY-------STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS---GKH 250
GL K +G Y + + + E L+ + + S ++SFG L +LL+ K
Sbjct: 152 GLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQ 211
Query: 251 IPPSHALDLIRDRNIQT----LTDSCLEGQ---FSSDEGTELVRLASRCLQYEPRERPNP 303
PP ++I + Q L + G + E+ L C + E + RP
Sbjct: 212 SPPKKFEEMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTF 271
Query: 304 RSLVTALVTL 313
RSL+ L +
Sbjct: 272 RSLIPILKEM 281
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283 |
| >gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Score = 62.2 bits (151), Expect = 6e-11
Identities = 61/254 (24%), Positives = 109/254 (42%), Gaps = 32/254 (12%)
Query: 72 VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
VV+ GK Q ++A+K N A + F+EEA+ + +L + +L L G C + +V
Sbjct: 19 VVHLGKWRAQIKVAIKAINEGAMSE-EDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIV 77
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
E+M N L +L + + K M L + + E +EY + ++ DL A +
Sbjct: 78 TEFMENGCLLNYLRQRQGKLSK-DMLLSMCQDVCEGMEY-LERNSFIHRDLAARNCLVSS 135
Query: 192 DVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGTLLLDLL 246
++S FG+ + D S++ A ++PPE + + +S ++SFG L+ ++
Sbjct: 136 TGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVF 195
Query: 247 SGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR--LAS--------RCLQYE 296
+ +P + N + + G L R LAS C +
Sbjct: 196 TEGKMP------FEKKSNYEVVE--------MISRGFRLYRPKLASMTVYEVMYSCWHEK 241
Query: 297 PRERPNPRSLVTAL 310
P RP L+ A+
Sbjct: 242 PEGRPTFAELLRAI 255
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256 |
| >gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 62.2 bits (151), Expect = 7e-11
Identities = 60/222 (27%), Positives = 106/222 (47%), Gaps = 21/222 (9%)
Query: 100 FLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHL-FHWETQPMKWAMRL 158
F E A + QL ++ L G C GDE ++V EY+ +L +L + + W +L
Sbjct: 46 FFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYVKFGSLDTYLKKNKNLINISW--KL 103
Query: 159 RVALHIAEALEYCTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST--- 214
VA +A AL + +++ L H ++ A ++ + + + +K S G S +
Sbjct: 104 EVAKQLAWALHFL--EDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPK 161
Query: 215 -----NLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL 268
+ + PPE + + ++ + +SFGT L ++ SG P S ALD + +Q
Sbjct: 162 EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLS-ALD--SQKKLQFY 218
Query: 269 TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
D Q + + TEL L ++C+ YEP RP+ R+++ L
Sbjct: 219 ED---RHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDL 257
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258 |
| >gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 62.0 bits (151), Expect = 1e-10
Identities = 50/187 (26%), Positives = 93/187 (49%), Gaps = 11/187 (5%)
Query: 73 VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132
V+ G ++AVK + FL+EA+ + +LR+ +L L C E + +V
Sbjct: 22 VWMGTWNGTTKVAVKTL-KPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVT 80
Query: 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 192
EYM +L L E + ++ + +A IAE + Y S+ ++ DL A I+ ++
Sbjct: 81 EYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESR-NYIHRDLAARNILVGEN 139
Query: 193 VNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
+ +++ FGL + +R+G + + +T PE GR T +S ++SFG LL ++
Sbjct: 140 LVCKIADFGLARLIEDDEYTAREGAKFP--IKWTAPEAANYGRFTIKSDVWSFGILLTEI 197
Query: 246 LSGKHIP 252
++ +P
Sbjct: 198 VTYGRVP 204
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261 |
| >gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Score = 60.8 bits (147), Expect = 2e-10
Identities = 60/238 (25%), Positives = 107/238 (44%), Gaps = 20/238 (8%)
Query: 73 VYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
V+ G ++AVK P++ FLEEA+ + +LR+ +L L E + +V
Sbjct: 22 VWMGTWNGNTKVAVKTLKPGTMSPES--FLEEAQIMKKLRHDKLVQLYAVVSE-EPIYIV 78
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
EYM +L L E + +K + +A +A + Y + ++ DL + I+ D
Sbjct: 79 TEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAY-IERMNYIHRDLRSANILVGD 137
Query: 192 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
+ +++ FGL + +R G + + +T PE GR T +S ++SFG LL +
Sbjct: 138 GLVCKIADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 195
Query: 245 LLSGKHIP-PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 301
L++ +P P + +R + + D L L +C + +P ERP
Sbjct: 196 LVTKGRVPYPG-----MNNREVLEQVERGYRMPCPQDCPISLHELMLQCWKKDPEERP 248
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260 |
| >gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 60.6 bits (147), Expect = 3e-10
Identities = 59/272 (21%), Positives = 107/272 (39%), Gaps = 37/272 (13%)
Query: 66 GEKAPNVVYKGKLE----NQFRIAVK--RFNRSAWPDARQFLEEARAVGQLRNRRLANLL 119
GE V +G+L +Q ++AVK + + + + +FL EA + + + L+
Sbjct: 8 GEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLI 67
Query: 120 GCCCEGDER------LLVAEYMPNDTLAKHLFH--WETQPMKWA--MRLRVALHIAEALE 169
G C E +++ +M + L L + P K L+ + IA +E
Sbjct: 68 GVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGME 127
Query: 170 YCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPP------EY 223
Y +++ ++ DL A + +D+ ++ FGL K G Y P E
Sbjct: 128 YLSNR-NFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIES 186
Query: 224 LRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFS 278
L T +S +++FG + ++ + P D +R N + CL+
Sbjct: 187 LADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNRLKQPEDCLD---- 242
Query: 279 SDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
EL L C + +P++RP L L
Sbjct: 243 -----ELYDLMYSCWRADPKDRPTFTKLREVL 269
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273 |
| >gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Score = 60.5 bits (146), Expect = 3e-10
Identities = 60/238 (25%), Positives = 111/238 (46%), Gaps = 20/238 (8%)
Query: 73 VYKGKLENQFRIAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
V+ G ++A+K + P+A FL+EA+ + +LR+ +L L E + +V
Sbjct: 22 VWMGTWNGTTKVAIKTLKPGTMMPEA--FLQEAQIMKKLRHDKLVPLYAVVSE-EPIYIV 78
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
E+M +L L + + +K + +A IA+ + Y + ++ DL A I+ D
Sbjct: 79 TEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAY-IERMNYIHRDLRAANILVGD 137
Query: 192 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
++ +++ FGL + +R G + + +T PE GR T +S ++SFG LL +
Sbjct: 138 NLVCKIADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 195
Query: 245 LLSGKHIP-PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 301
L++ +P P + ++ + C +G S L L C + +P ERP
Sbjct: 196 LVTKGRVPYPGMVNREVLEQVERGYRMPCPQGCPES-----LHELMKLCWKKDPDERP 248
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260 |
| >gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Score = 60.1 bits (145), Expect = 4e-10
Identities = 60/238 (25%), Positives = 106/238 (44%), Gaps = 20/238 (8%)
Query: 73 VYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
V+ G R+A+K P+A FL+EA+ + +LR+ +L L E + +V
Sbjct: 22 VWMGTWNGTTRVAIKTLKPGTMSPEA--FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 78
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
EYM +L L + ++ + +A IA + Y + ++ DL A I+ +
Sbjct: 79 TEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY-VERMNYVHRDLRAANILVGE 137
Query: 192 DVNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
++ +++ FGL + +R G + + +T PE GR T +S ++SFG LL +
Sbjct: 138 NLVCKVADFGLARLIEDNEYTARQGAKFP--IKWTAPEAALYGRFTIKSDVWSFGILLTE 195
Query: 245 LLSGKHIP-PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 301
L + +P P + D+ + C + L L +C + EP ERP
Sbjct: 196 LTTKGRVPYPGMVNREVLDQVERGYRMPC-----PPECPESLHDLMCQCWRKEPEERP 248
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262 |
| >gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Score = 59.6 bits (144), Expect = 5e-10
Identities = 48/198 (24%), Positives = 92/198 (46%), Gaps = 12/198 (6%)
Query: 62 VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGC 121
V E G +V+ G + ++A+K A + F+EEA+ + +L + +L L G
Sbjct: 9 VQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSE-EDFIEEAQVMMKLSHPKLVQLYGV 67
Query: 122 CCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMR--LRVALHIAEALEYCTSKERALY 179
C E LV E+M + L+ +L Q K++ L + L + E + Y S ++
Sbjct: 68 CTERSPICLVFEFMEHGCLSDYL---RAQRGKFSQETLLGMCLDVCEGMAYLESSN-VIH 123
Query: 180 HDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN-----LAFTPPEYLRTGRVTPESV 234
DL A + ++ ++S FG+ + D + S+ + ++ PE + + +S
Sbjct: 124 RDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSD 183
Query: 235 MYSFGTLLLDLLSGKHIP 252
++SFG L+ ++ S P
Sbjct: 184 VWSFGVLMWEVFSEGKTP 201
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256 |
| >gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Score = 59.7 bits (144), Expect = 5e-10
Identities = 45/187 (24%), Positives = 88/187 (47%), Gaps = 11/187 (5%)
Query: 73 VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132
V+ G N ++AVK + + FLEEA + L++ +L L + + ++
Sbjct: 22 VWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIIT 80
Query: 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 192
EYM +L L E + + + IAE + Y ++ ++ DL A ++ +
Sbjct: 81 EYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAY-IERKNYIHRDLRAANVLVSES 139
Query: 193 VNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
+ +++ FGL + +R+G + + +T PE + G T +S ++SFG LL ++
Sbjct: 140 LMCKIADFGLARVIEDNEYTAREGAKFP--IKWTAPEAINFGSFTIKSDVWSFGILLYEI 197
Query: 246 LSGKHIP 252
++ IP
Sbjct: 198 VTYGKIP 204
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261 |
| >gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Score = 58.2 bits (140), Expect = 2e-09
Identities = 61/268 (22%), Positives = 112/268 (41%), Gaps = 42/268 (15%)
Query: 79 ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 138
+++ +AVK ++ + F EA + L++ + G C EGD ++V EYM +
Sbjct: 33 QDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHG 92
Query: 139 TLAKHL--------FHWETQP---MKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRI 187
L K L E + + L +A IA + Y S + ++ DL
Sbjct: 93 DLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLAS-QHFVHRDLATRNC 151
Query: 188 VFDDDVNPRLSCFGLMKNSRDGRSYSTN-----------LAFTPPEYLRTGRVTPESVMY 236
+ +++ ++ FG+ SRD YST+ + + PPE + + T ES ++
Sbjct: 152 LVGENLLVKIGDFGM---SRD--VYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVW 206
Query: 237 SFGTLLLDLLS-GK----HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291
S G +L ++ + GK + + ++ I + +C + E+ L
Sbjct: 207 SLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRTCPK---------EVYDLMLG 257
Query: 292 CLQYEPRERPNPRSLVTALVTLQKDTEV 319
C Q EP R N + + + L L K + V
Sbjct: 258 CWQREPHMRLNIKEIHSLLQNLAKASPV 285
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288 |
| >gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Score = 57.6 bits (139), Expect = 3e-09
Identities = 57/240 (23%), Positives = 109/240 (45%), Gaps = 21/240 (8%)
Query: 84 IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKH 143
+AVK +FL+EA + ++++ L LLG C ++ E+M L +
Sbjct: 34 VAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 92
Query: 144 LFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLM 203
L Q + + L +A I+ A+EY K ++ DL A + ++ +++ FGL
Sbjct: 93 LRECNRQEVNAVVLLYMATQISSAMEYLEKKN-FIHRDLAARNCLVGENHLVKVADFGLS 151
Query: 204 KNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL 257
+ G +Y+ + + +T PE L + + +S +++FG LL ++ + + P +
Sbjct: 152 RLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT-YGMSPYPGI 209
Query: 258 DLIRDRNIQTLTDSCLEGQFSSD--EG--TELVRLASRCLQYEPRERPNPRSLVTALVTL 313
DL + L LE + + EG ++ L C Q+ P +RP+ + A T+
Sbjct: 210 DL---SQVYEL----LEKGYRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263 |
| >gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Score = 56.9 bits (137), Expect = 5e-09
Identities = 61/271 (22%), Positives = 112/271 (41%), Gaps = 45/271 (16%)
Query: 79 ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 138
+++ +AVK + F EA + L++ + G C +GD ++V EYM +
Sbjct: 33 KDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHG 92
Query: 139 TLAKHL--------FHWETQPMK------WAMRLRVALHIAEALEYCTSKERALYHDLNA 184
L K L + QP + + L +A IA + Y S + ++ DL
Sbjct: 93 DLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLAS-QHFVHRDLAT 151
Query: 185 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN-----------LAFTPPEYLRTGRVTPES 233
+ ++ ++ FG+ SRD YST+ + + PPE + + T ES
Sbjct: 152 RNCLVGANLLVKIGDFGM---SRD--VYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTES 206
Query: 234 VMYSFGTLLLDLLS-GK----HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288
++SFG +L ++ + GK + + ++ I + C + E+ +
Sbjct: 207 DVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERPRVCPK---------EVYDI 257
Query: 289 ASRCLQYEPRERPNPRSLVTALVTLQKDTEV 319
C Q EP++R N + + L L K T +
Sbjct: 258 MLGCWQREPQQRLNIKEIYKILHALGKATPI 288
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291 |
| >gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 56.4 bits (137), Expect = 6e-09
Identities = 55/182 (30%), Positives = 76/182 (41%), Gaps = 18/182 (9%)
Query: 126 DERL-LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 184
+E+L LV EY P L HL + A R A I ALEY S +Y DL
Sbjct: 65 EEKLYLVLEYAPGGELFSHLSKEGRFSEERA-RFYAA-EIVLALEYLHSL-GIIYRDLKP 121
Query: 185 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGT 240
I+ D D + +L+ FGL K S + TP PE L +S G
Sbjct: 122 ENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGV 181
Query: 241 LLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQ--FSSDEGTELVRLASRCLQYEPR 298
LL ++L+GK PP +A + + + + L+ F E L S LQ +P
Sbjct: 182 LLYEMLTGK--PPFYA------EDRKEIYEKILKDPLRFPEFLSPEARDLISGLLQKDPT 233
Query: 299 ER 300
+R
Sbjct: 234 KR 235
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250 |
| >gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 56.2 bits (136), Expect = 8e-09
Identities = 63/267 (23%), Positives = 112/267 (41%), Gaps = 40/267 (14%)
Query: 64 EHGEKAPNVVYKGKLENQFR----IAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANL 118
E GE V +G+L+ + +A+K + R FL EA +GQ + + L
Sbjct: 16 EFGE-----VCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRL 70
Query: 119 LGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERAL 178
G + +++ EYM N +L K L + + + + IA ++Y + E
Sbjct: 71 EGVVTKSRPVMIITEYMENGSLDKFLRENDGK-FTVGQLVGMLRGIASGMKYLS--EMNY 127
Query: 179 YH-DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS-YSTN-----LAFTPPEYLRTGRVTP 231
H DL A I+ + ++ ++S FGL + D + Y+T + +T PE + + T
Sbjct: 128 VHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTS 187
Query: 232 ESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTD--------SCLEGQFSSDEGT 283
S ++SFG ++ +++S P D+ I+ + D C
Sbjct: 188 ASDVWSFGIVMWEVMSYGERP---YWDMSNQDVIKAVEDGYRLPPPMDCPSA-------- 236
Query: 284 ELVRLASRCLQYEPRERPNPRSLVTAL 310
L +L C Q + ERP +V+ L
Sbjct: 237 -LYQLMLDCWQKDRNERPTFSQIVSTL 262
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 55.8 bits (135), Expect = 1e-08
Identities = 65/279 (23%), Positives = 118/279 (42%), Gaps = 48/279 (17%)
Query: 56 FAMENIV--SEHGEKAPNVVYKGKLEN------QFRIAVKRFN-RSAWPDARQFLEEARA 106
E I E G+ + +VY+G + + R+A+K N ++ + +FL EA
Sbjct: 3 LPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASV 62
Query: 107 VGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHL--------FHWETQPMKWAMRL 158
+ + + LLG G L+V E M L +L + P +
Sbjct: 63 MKEFNCHHVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFI 122
Query: 159 RVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN--- 215
++A IA+ + Y +K + ++ DL A + +D+ ++ FG+ +RD Y T+
Sbjct: 123 QMAAEIADGMAYLAAK-KFVHRDLAARNCMVAEDLTVKIGDFGM---TRD--IYETDYYR 176
Query: 216 --------LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP---PSH--ALDLIRD 262
+ + PE L+ G T +S ++SFG +L ++ + P S+ L + D
Sbjct: 177 KGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVID 236
Query: 263 RNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 301
L ++C + +L+ L C QY P+ RP
Sbjct: 237 GGHLDLPENCPD---------KLLELMRMCWQYNPKMRP 266
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277 |
| >gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 55.5 bits (134), Expect = 1e-08
Identities = 44/187 (23%), Positives = 91/187 (48%), Gaps = 11/187 (5%)
Query: 73 VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132
V++G N +AVK + D + FL EA+ + +LR+ +L L C + +V
Sbjct: 22 VWEGLWNNTTPVAVKTL-KPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVT 80
Query: 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 192
E M +L ++L + +K + +A +A + Y + + ++ DL A ++ ++
Sbjct: 81 ELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEA-QNYIHRDLAARNVLVGEN 139
Query: 193 VNPRLSCFGLMK-------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
+++ FGL + +R+G + + +T PE R + +S ++SFG LL ++
Sbjct: 140 NICKVADFGLARVIKEDIYEAREGAKFP--IKWTAPEAALYNRFSIKSDVWSFGILLTEI 197
Query: 246 LSGKHIP 252
++ +P
Sbjct: 198 VTYGRMP 204
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261 |
| >gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Score = 54.7 bits (131), Expect = 3e-08
Identities = 63/265 (23%), Positives = 109/265 (41%), Gaps = 42/265 (15%)
Query: 66 GEKAPNVVYKGKL---ENQFRIAVKRF-----NRSAWPDARQFLEEARAVGQLRNRRLAN 117
GE V +G+L ++ ++AVK RS D FL EA + + + +
Sbjct: 8 GEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMED---FLSEAVCMKEFDHPNVMR 64
Query: 118 LLGCCCEGDER------LLVAEYMPNDTLAKHLFHWE--TQP--MKWAMRLRVALHIAEA 167
L+G C + E +++ +M + L L + P + M ++ IA
Sbjct: 65 LIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASG 124
Query: 168 LEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN------SRDGRSYSTNLAFTPP 221
+EY +SK ++ DL A + ++++N ++ FGL K R GR + +
Sbjct: 125 MEYLSSK-SFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAI 183
Query: 222 EYLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQ 276
E L T +S ++SFG + ++ + P S D +R N CL+G
Sbjct: 184 ESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNRLKQPPDCLDGL 243
Query: 277 FSSDEGTELVRLASRCLQYEPRERP 301
+S L S C P++RP
Sbjct: 244 YS---------LMSSCWLLNPKDRP 259
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272 |
| >gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Score = 54.1 bits (130), Expect = 4e-08
Identities = 57/252 (22%), Positives = 106/252 (42%), Gaps = 19/252 (7%)
Query: 66 GEKAPNVVYKGKLENQFRI-AVKRFNRSAWPDARQ--FLEEARAVGQLRNRRLANLLGCC 122
G+ + VV+K + R+ A+K+ + S + ++EAR + +L + +
Sbjct: 9 GKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESF 68
Query: 123 CEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDL 182
+ + +V EY N L K L +P+ R + I L + SK + L+ D+
Sbjct: 69 LDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSK-KILHRDI 127
Query: 183 NAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSF 238
+ + D N ++ G+ K D +++ + TP PE +S +++
Sbjct: 128 KSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDKPYNEKSDVWAL 187
Query: 239 GTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQF---SSDEGTELVRLASRCLQY 295
G +L + +GKH P A N L + G F S +L +L +CL
Sbjct: 188 GVVLYECCTGKH--PFDA------NNQGALILKIIRGVFPPVSQMYSQQLAQLIDQCLTK 239
Query: 296 EPRERPNPRSLV 307
+ R+RP+ L+
Sbjct: 240 DYRQRPDTFQLL 251
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 54.1 bits (131), Expect = 4e-08
Identities = 53/241 (21%), Positives = 93/241 (38%), Gaps = 23/241 (9%)
Query: 72 VVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130
VYK + +A+K + + + E + + + ++ + G + DE +
Sbjct: 15 EVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWI 74
Query: 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD 190
V E+ +L K L Q + + V + + LEY S ++ D+ A I+
Sbjct: 75 VMEFCSGGSL-KDLLKSTNQTLTESQIAYVCKELLKGLEYLHSN-GIIHRDIKAANILLT 132
Query: 191 DDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGTLLLDLL 246
D +L FGL D ++ + TP PE + ++ ++S G ++L
Sbjct: 133 SDGEVKLIDFGLSAQLSDTKA-RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELA 191
Query: 247 SGKHIPPSH------ALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
GK PP AL I L + SDE + + +CLQ P +R
Sbjct: 192 EGK--PPYSELPPMKALFKIATNGPPGL----RNPEKWSDEFKDFL---KKCLQKNPEKR 242
Query: 301 P 301
P
Sbjct: 243 P 243
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Score = 54.2 bits (131), Expect = 4e-08
Identities = 40/156 (25%), Positives = 61/156 (39%), Gaps = 19/156 (12%)
Query: 158 LRVALHIAEALEYC----TSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYS 213
R+ + AL C L+ DL I D + N +L FGL K S++
Sbjct: 108 WRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFA 167
Query: 214 TNLAFTP----PEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHA---LDLIRDRNIQ 266
TP PE L +S ++S G L+ +L + PP A L L I+
Sbjct: 168 KTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALS--PPFTARNQLQLA--SKIK 223
Query: 267 TLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPN 302
+ ++SS EL + L +P +RP+
Sbjct: 224 EGKFRRIPYRYSS----ELNEVIKSMLNVDPDKRPS 255
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265 |
| >gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 53.2 bits (128), Expect = 7e-08
Identities = 59/234 (25%), Positives = 96/234 (41%), Gaps = 36/234 (15%)
Query: 96 DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWA 155
D+ F E A + QL ++ L L G C DE ++V EY+ L L H E +
Sbjct: 44 DSLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMVEEYVKFGPLDVFL-HREKNNVSLH 101
Query: 156 MRLRVALHIAEALEYCTSKE--------RALY---HDLNAYRIVFDDDVNPRLSCFGLMK 204
+L VA +A AL Y K+ + + + LN + F +P + L +
Sbjct: 102 WKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSR 161
Query: 205 NSRDGRSYSTNLAFTPPEYLRTGRVTPESVM--YSFGTLLLDLLSGKHIP-----PSHAL 257
R R + PE +R G+ + +SFGT LL++ S P S
Sbjct: 162 EERVERI-----PWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKE 216
Query: 258 DLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311
+D++ + D EL L ++C Y+P +RP+ R+++ L
Sbjct: 217 RFYQDQHRLPMPDC-----------AELANLINQCWTYDPTKRPSFRAILRDLN 259
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259 |
| >gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 53.1 bits (127), Expect = 1e-07
Identities = 56/261 (21%), Positives = 104/261 (39%), Gaps = 44/261 (16%)
Query: 84 IAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAK 142
+AVK AR FL+E + + +L+N + LLG C D ++ EYM N L +
Sbjct: 47 VAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQ 106
Query: 143 HLFHWETQP----------MKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 192
L E + + A L +A+ IA ++Y S ++ DL + +
Sbjct: 107 FLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN-FVHRDLATRNCLVGNH 165
Query: 193 VNPRLSCFGLMKNSRDGRSYSTNLAFTPP------EYLRTGRVTPESVMYSFGTLLLDLL 246
+++ FG+ +N G Y P E + G+ T S +++FG L ++
Sbjct: 166 YTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMF 225
Query: 247 SGKHIPPSHALDLIRDRNIQTLTDSCL---EGQFSSDEGTE------------LVRLASR 291
+ L +++ L+D + G+F ++G + + +L R
Sbjct: 226 T-----------LCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMR 274
Query: 292 CLQYEPRERPNPRSLVTALVT 312
C + ++RP + L
Sbjct: 275 CWSRDIKDRPTFNKIHHFLRE 295
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295 |
| >gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Score = 53.0 bits (127), Expect = 1e-07
Identities = 63/268 (23%), Positives = 111/268 (41%), Gaps = 52/268 (19%)
Query: 84 IAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAK 142
+AVK A +AR FL+E + + +L++ + LLG C + D ++ EYM N L +
Sbjct: 49 VAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQ 108
Query: 143 HLFHWETQ-----------------PMKWAMRLRVALHIAEALEYCTSKERALYHDLNAY 185
L + ++ L VAL IA ++Y +S ++ DL
Sbjct: 109 FLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN-FVHRDLATR 167
Query: 186 RIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPP------EYLRTGRVTPESVMYSFG 239
+ +++ +++ FG+ +N G Y P E + G+ T S +++FG
Sbjct: 168 NCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFG 227
Query: 240 TLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCL---EGQFSSDEGTE------------ 284
L ++L L +++ LTD + G+F D+G +
Sbjct: 228 VTLWEILM-----------LCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQG 276
Query: 285 LVRLASRCLQYEPRERPNPRSLVTALVT 312
L L +C + RERP S + A +T
Sbjct: 277 LYELMLQCWSRDCRERP-SFSDIHAFLT 303
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304 |
| >gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Score = 52.3 bits (125), Expect = 2e-07
Identities = 54/253 (21%), Positives = 100/253 (39%), Gaps = 46/253 (18%)
Query: 84 IAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTL-- 140
+AVK +A + R L E + Q+ + + L G C + LL+ EY +L
Sbjct: 33 VAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRS 92
Query: 141 --------------------AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
+ +L + + + + + A I+ ++Y E L H
Sbjct: 93 FLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLA--EMKLVH 150
Query: 181 -DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPES 233
DL A ++ + ++S FGL ++ + SY + + E L T +S
Sbjct: 151 RDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQS 210
Query: 234 VMYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288
++SFG LL ++++ G + I P +L++ ++C E E+ L
Sbjct: 211 DVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKTGYRMERPENCSE---------EMYNL 261
Query: 289 ASRCLQYEPRERP 301
C + EP +RP
Sbjct: 262 MLTCWKQEPDKRP 274
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290 |
| >gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Score = 51.5 bits (123), Expect = 3e-07
Identities = 40/157 (25%), Positives = 76/157 (48%), Gaps = 11/157 (7%)
Query: 98 RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMR 157
R FL EA +GQ + + L G G+ ++V EYM N L L E Q + A +
Sbjct: 51 RGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIVTEYMSNGALDSFLRKHEGQLV--AGQ 108
Query: 158 LRVALH-IAEALEYCTSKERALYHD-LNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN 215
L L +A ++Y + E H L A++++ + D+ ++S F ++ + Y+T
Sbjct: 109 LMGMLPGLASGMKYLS--EMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYTTM 166
Query: 216 -----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS 247
+ + PE ++ + S ++SFG ++ +++S
Sbjct: 167 SGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMS 203
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Score = 50.9 bits (122), Expect = 4e-07
Identities = 66/257 (25%), Positives = 114/257 (44%), Gaps = 32/257 (12%)
Query: 72 VVYKGKL--ENQFRI--AVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD 126
VY G L + +I AVK NR + + QFL+E + + + +LLG C +
Sbjct: 10 CVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSE 69
Query: 127 -ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAY 185
L+V YM + L ++ ET + L +A+ +EY SK + ++ DL A
Sbjct: 70 GSPLVVLPYMKHGDL-RNFIRSETHNPTVKDLIGFGLQVAKGMEYLASK-KFVHRDLAAR 127
Query: 186 RIVFDDDVNPRLSCFGLMKNSRDGRSYSTN--------LAFTPPEYLRTGRVTPESVMYS 237
+ D+ +++ FGL ++ D YS + + + E L+T + T +S ++S
Sbjct: 128 NCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWS 187
Query: 238 FGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEG------QFSSDEGTELVRLASR 291
FG LL +L++ + PP D + +T L+G ++ D L +
Sbjct: 188 FGVLLWELMT-RGAPP------YPDVDSFDITVYLLQGRRLLQPEYCPD---PLYEVMLS 237
Query: 292 CLQYEPRERPNPRSLVT 308
C +P RP LV+
Sbjct: 238 CWHPKPEMRPTFSELVS 254
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262 |
| >gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Score = 51.2 bits (122), Expect = 4e-07
Identities = 50/215 (23%), Positives = 92/215 (42%), Gaps = 27/215 (12%)
Query: 100 FLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLR 159
FL EA + L++ +L L + + ++ E+M +L L E +
Sbjct: 48 FLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLID 106
Query: 160 VALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK-------NSRDGRSY 212
+ IAE + + + ++ DL A I+ + +++ FGL + +R+G +
Sbjct: 107 FSAQIAEGMAF-IEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKF 165
Query: 213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP------PSHALDLIRDRNIQ 266
+ +T PE + G T +S ++SFG LL+++++ IP P L R +
Sbjct: 166 P--IKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMP 223
Query: 267 TLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 301
++C E EL + RC + P ERP
Sbjct: 224 R-PENCPE---------ELYNIMMRCWKNRPEERP 248
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260 |
| >gnl|CDD|238112 cd00189, TPR, Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]- X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans in various subcellular locations; involved in a variety of functions including protein-protein interactions, but common features in the interaction partners have not been defined; involved in chaperone, cell-cycle, transciption, and protein transport complexes; the number of TPR motifs varies among proteins (1,3-11,13 15,16,19); 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accomodate an alpha-helix of a target protein; it has been proposed that TPR proteins preferably interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes; examples of TPR-proteins include, Cdc16p, Cdc23p and Cdc27p components of the cyclosome/APC, the Pex5p/Pas10p receptor for peroxisomal targeting signals, the Tom70p co-receptor for mitochondrial targeting signals, Ser/Thr phosphatase 5C and the p110 subunit of O-GlcNAc transferase; three copies of the repeat are present here | Back alignment and domain information |
|---|
Score = 47.8 bits (114), Expect = 4e-07
Identities = 23/96 (23%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Query: 382 KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQV 441
G++ ++ D+ ++E Y + +++ + A+ + +Y +EAL D +A
Sbjct: 4 LNLGNLYYKLGDYDEALEYYEKALELDPD-NADAYYNLAAAYYKLGKYEEALEDYEKALE 62
Query: 442 ISPVWHMAAYLQAAALFALGKENEAQAALREASILE 477
+ P A Y A + LGK EA A +A L+
Sbjct: 63 LDPDNAKAYYNLGLAYYKLGKYEEALEAYEKALELD 98
|
Length = 100 |
| >gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Score = 51.0 bits (122), Expect = 5e-07
Identities = 65/268 (24%), Positives = 108/268 (40%), Gaps = 49/268 (18%)
Query: 68 KAPNVVYKGKLENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLLGCCCEGD 126
+AP ++ E +AVK A D + F EA + + + + LLG C G
Sbjct: 25 RAPGLL---PYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGK 81
Query: 127 ERLLVAEYMPNDTLAKHLFH----WETQ----------------PMKWAMRLRVALHIAE 166
L+ EYM L + L H + P+ +L +A +A
Sbjct: 82 PMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAA 141
Query: 167 ALEYCTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMKN--SRDGRSYSTNLA----FT 219
+ Y + ER H DL + +++ +++ FGL +N S D S N A +
Sbjct: 142 GMAYLS--ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWM 199
Query: 220 PPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALD------LIRDRNIQTLTDSCL 273
PPE + R T ES ++++G +L ++ S + P + + +RD N+ + D+C
Sbjct: 200 PPESIFYNRYTTESDVWAYGVVLWEIFS-YGMQPYYGMAHEEVIYYVRDGNVLSCPDNC- 257
Query: 274 EGQFSSDEGTELVRLASRCLQYEPRERP 301
EL L C P +RP
Sbjct: 258 --------PLELYNLMRLCWSKLPSDRP 277
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288 |
| >gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Score = 50.4 bits (120), Expect = 7e-07
Identities = 63/284 (22%), Positives = 118/284 (41%), Gaps = 48/284 (16%)
Query: 62 VSEHGEKAPNVVYKGKL-----ENQFRIAVKRF----NRSAWPDARQFLEEARAVGQLRN 112
+ E GE A +YKG L ++ +A+K N W + F +EA + +L +
Sbjct: 10 MEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGE---FQQEASLMAELHH 66
Query: 113 RRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHW-----------ETQPMKWAMR---- 157
+ LLG + ++ EY+ L + L E +K ++
Sbjct: 67 PNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDF 126
Query: 158 LRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN-- 215
L +A+ IA +EY +S ++ DL A I+ + ++ ++S GL + Y
Sbjct: 127 LHIAIQIAAGMEYLSS-HFFVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPK 185
Query: 216 ----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQ 266
+ + PPE + G+ + +S ++SFG +L ++ S P ++++R R +
Sbjct: 186 SLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRKRQLL 245
Query: 267 TLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
++ C +S L + C Q P RP + + T L
Sbjct: 246 PCSEDCPPRMYS---------LMTECWQEGPSRRPRFKDIHTRL 280
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283 |
| >gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Score = 49.9 bits (119), Expect = 1e-06
Identities = 56/256 (21%), Positives = 102/256 (39%), Gaps = 35/256 (13%)
Query: 73 VYKGKL-------ENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLLGCCCE 124
VY+G R+AVK + A + +FL+EA + + + LLG C
Sbjct: 11 VYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLL 70
Query: 125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAM-----RLRVALHIAEALEYCTSKERALY 179
+ + ++ E M L +L + + L + L +A+ Y + ++
Sbjct: 71 NEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVY-LEQMHFIH 129
Query: 180 HDLNAYRIV-----FDDDVNPRLSCFGLMKNSRDGRSYST------NLAFTPPEYLRTGR 228
DL A + +D D ++ FGL ++ Y + + PE L G+
Sbjct: 130 RDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGK 189
Query: 229 VTPESVMYSFGTLLLDLLSGKHIP-PSHALDLIRDRNIQTLTDSCLEGQFSSDEGT--EL 285
T +S ++SFG L+ ++L+ P P+ N + L G+ E ++
Sbjct: 190 FTTQSDVWSFGVLMWEILTLGQQPYPALN-------NQEVLQHVTAGGRLQKPENCPDKI 242
Query: 286 VRLASRCLQYEPRERP 301
+L + C +P ERP
Sbjct: 243 YQLMTNCWAQDPSERP 258
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269 |
| >gnl|CDD|173643 cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Score = 49.6 bits (118), Expect = 1e-06
Identities = 54/244 (22%), Positives = 104/244 (42%), Gaps = 24/244 (9%)
Query: 76 GKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135
E + ++ +K + S + F E A + Q+ ++ + L G C E ++V E++
Sbjct: 27 YSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENIMVEEFV 86
Query: 136 PNDTLAKHLF-HWETQPMKWAMRLRVALHIAEALEYCTSKERALYH------DLNAYRIV 188
L LF H ++ + + +VA +A AL Y K+ L H ++ R
Sbjct: 87 EFGPL--DLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKD--LVHGNVCTKNILLAREG 142
Query: 189 FDDDVNP--RLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDL 245
D + P +LS G+ + + + PE + + + + +SFGT L ++
Sbjct: 143 IDGECGPFIKLSDPGIPITVLSRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEI 202
Query: 246 LSGKHIPPSHALDLIRDRNIQTLTDSCLEGQF--SSDEGTELVRLASRCLQYEPRERPNP 303
IP ++D+ + + EGQ + EL L + C+ Y+P +RP
Sbjct: 203 CYNGEIP-------LKDKTLAE-KERFYEGQCMLVTPSCKELADLMTHCMNYDPNQRPFF 254
Query: 304 RSLV 307
R+++
Sbjct: 255 RAIM 258
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 262 |
| >gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Score = 48.8 bits (116), Expect = 2e-06
Identities = 52/198 (26%), Positives = 92/198 (46%), Gaps = 23/198 (11%)
Query: 64 EHGEKAPNVVYKGKLE----NQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANL 118
E GE V++G L+ + +A+K RQ FL EA +GQ + + L
Sbjct: 17 EFGE-----VFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRL 71
Query: 119 LGCCCEGDERLLVAEYMPNDTLAKHL--FHWETQPMKWAMRLRVALHIAEALEYCTSKER 176
G + +++ EYM N L K+L E + LR IA ++Y S
Sbjct: 72 EGVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLR---GIAAGMKY-LSDMN 127
Query: 177 ALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYSTN-----LAFTPPEYLRTGRV 229
++ DL A I+ + ++ ++S FGL + D +Y+T+ + +T PE + +
Sbjct: 128 YVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKF 187
Query: 230 TPESVMYSFGTLLLDLLS 247
T S ++SFG ++ +++S
Sbjct: 188 TSASDVWSFGIVMWEVMS 205
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268 |
| >gnl|CDD|133207 cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 48.7 bits (116), Expect = 2e-06
Identities = 65/250 (26%), Positives = 108/250 (43%), Gaps = 40/250 (16%)
Query: 81 QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM---PN 137
+ R+ +K + S A F E A + Q+ + LA + G C G E ++V E++ P
Sbjct: 44 ELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFVHGVCVRGSENIMVEEFVEHGPL 103
Query: 138 DT-LAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH------DLNAYRIVFD 190
D L K P+ W ++ VA +A AL Y K L H ++ R+
Sbjct: 104 DVCLRKEKGR---VPVAW--KITVAQQLASALSYLEDKN--LVHGNVCAKNILLARLGLA 156
Query: 191 DDVNP--RLS--CFGLMKNSRDGRSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDL 245
+ +P +LS SR+ R + + PE + G ++ + +SFGT LL++
Sbjct: 157 EGTSPFIKLSDPGVSFTALSREERV--ERIPWIAPECVPGGNSLSTAADKWSFGTTLLEI 214
Query: 246 LSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
+P PS + ++ + SC EL L S+CL YEP +R
Sbjct: 215 CFDGEVPLKERTPSEK-ERFYEKKHRLPEPSC----------KELATLISQCLTYEPTQR 263
Query: 301 PNPRSLVTAL 310
P+ R+++ L
Sbjct: 264 PSFRTILRDL 273
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 274 |
| >gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 48.5 bits (116), Expect = 2e-06
Identities = 45/183 (24%), Positives = 83/183 (45%), Gaps = 12/183 (6%)
Query: 73 VYKGKLENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
VY K + +AVK + ++FL EA + QL + + L+G C+G+ +LV
Sbjct: 15 VYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIG-VCKGEPLMLV 73
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
E P L K+L + + + + +A +A + Y SK ++ DL A ++ +
Sbjct: 74 MELAPLGPLLKYLK--KRREIPVSDLKELAHQVAMGMAYLESK-HFVHRDLAARNVLLVN 130
Query: 192 DVNPRLSCFGLMKNSRDGRSYSTN-------LAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
++S FG+ + G Y L + PE + G+ + +S ++S+G L +
Sbjct: 131 RHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWE 190
Query: 245 LLS 247
S
Sbjct: 191 AFS 193
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257 |
| >gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Score = 48.1 bits (115), Expect = 3e-06
Identities = 51/226 (22%), Positives = 87/226 (38%), Gaps = 26/226 (11%)
Query: 100 FLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLR 159
FL+EA + L + L L G ++V E P +L L +
Sbjct: 43 FLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCD 101
Query: 160 VALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN---- 215
A+ IA + Y SK R ++ DL A I+ D ++ FGLM+ +
Sbjct: 102 YAVQIANGMRYLESK-RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHL 160
Query: 216 ---LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-----GKHIPPSHALDLIRDRNIQT 267
A+ PE LRT + S ++ FG L ++ + + S L I D+ +
Sbjct: 161 KVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKI-DKEGER 219
Query: 268 LT--DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311
L ++C + ++ + +C + P +RP +L L
Sbjct: 220 LERPEACPQ---------DIYNVMLQCWAHNPADRPTFAALREFLP 256
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257 |
| >gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Score = 48.5 bits (115), Expect = 3e-06
Identities = 68/273 (24%), Positives = 110/273 (40%), Gaps = 52/273 (19%)
Query: 64 EHGEKAPNVVYKGKLEN------QFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLA 116
E GE A V+ + N + +AVK + A ARQ F EA + L+++ +
Sbjct: 12 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKAL-KEASESARQDFQREAELLTVLQHQHIV 70
Query: 117 NLLGCCCEGDERLLVAEYMPNDTL----------AKHLFHWETQP---MKWAMRLRVALH 163
G C EG L+V EYM + L AK L E + L +A
Sbjct: 71 RFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQ 130
Query: 164 IAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN-------- 215
IA + Y S ++ DL + + ++ FG+ SRD YST+
Sbjct: 131 IASGMVYLASLH-FVHRDLATRNCLVGQGLVVKIGDFGM---SRD--IYSTDYYRVGGRT 184
Query: 216 ---LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GK----HIPPSHALDLIRDRNIQT 267
+ + PPE + + T ES ++SFG +L ++ + GK + + A++ I
Sbjct: 185 MLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQGRELE 244
Query: 268 LTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
+C E+ + C Q EP++R
Sbjct: 245 RPRTC---------PPEVYAIMQGCWQREPQQR 268
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280 |
| >gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 48.1 bits (114), Expect = 5e-06
Identities = 53/253 (20%), Positives = 104/253 (41%), Gaps = 37/253 (14%)
Query: 101 LEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMR--- 157
+E + +G+ +N + NLLG C + ++ EY L ++L M ++
Sbjct: 68 MEMMKMIGKHKN--IINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCK 125
Query: 158 -----------LRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 206
+ A +A +EY S+ + ++ DL A ++ +D +++ FGL ++
Sbjct: 126 LPEEQLTFKDLVSCAYQVARGMEYLASQ-KCIHRDLAARNVLVTEDNVMKIADFGLARDV 184
Query: 207 RDGRSY--STN----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSG-----KHIPPSH 255
+ Y +TN + + PE L T +S ++SFG LL ++ + IP
Sbjct: 185 HNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE 244
Query: 256 ALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 315
L+++ + +C EL + C P +RP + LV L +
Sbjct: 245 LFKLLKEGHRMDKPANCTH---------ELYMIMRECWHAVPSQRPTFKQLVEDLDRVLT 295
Query: 316 DTEVPSHVLMGIP 328
T ++ + +P
Sbjct: 296 VTSTDEYLDLSVP 308
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334 |
| >gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Score = 47.4 bits (113), Expect = 6e-06
Identities = 53/250 (21%), Positives = 97/250 (38%), Gaps = 42/250 (16%)
Query: 84 IAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAK 142
+AVK S D FL EA + + ++ + L+G E R ++ E M L
Sbjct: 39 VAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRFILLELMAGGDLKS 98
Query: 143 HLFHWE---TQPMKWAMR--LRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRL 197
L +P M+ L A +A+ +Y ++ D+ A + L
Sbjct: 99 FLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN-HFIHRDIAARNCL--------L 149
Query: 198 SC-----------FGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSFGT 240
+C FG+ ++ Y + + PPE G T ++ ++SFG
Sbjct: 150 TCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGV 209
Query: 241 LLLDLLSGKHIP-PSHALDLIRDRNIQTLTDSCLEGQFSSDEG--TELVRLASRCLQYEP 297
LL ++ S ++P P N + + G+ +G + R+ + C Q+ P
Sbjct: 210 LLWEIFSLGYMPYPGR-------TNQEVMEFVTGGGRLDPPKGCPGPVYRIMTDCWQHTP 262
Query: 298 RERPNPRSLV 307
+RPN +++
Sbjct: 263 EDRPNFATIL 272
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277 |
| >gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Score = 47.4 bits (113), Expect = 6e-06
Identities = 56/249 (22%), Positives = 96/249 (38%), Gaps = 23/249 (9%)
Query: 73 VYKGKLENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
VY + +AVK P R+ FL+EA + Q + + L+G E + +V
Sbjct: 26 VYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIV 84
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
E P L +L + A + + ++ AL Y SK R ++ D+ A ++
Sbjct: 85 MELAPLGELRSYL-QVNKYSLDLASLILYSYQLSTALAYLESK-RFVHRDIAARNVLVSS 142
Query: 192 DVNPRLSCFGLMKNSRDGRSYSTNLAFTP-----PEYLRTGRVTPESVMYSFGTLLLDLL 246
+L FGL + D Y + P PE + R T S ++ FG + ++L
Sbjct: 143 PDCVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 202
Query: 247 S-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 301
G + + + I + + +C L L ++C Y+P +RP
Sbjct: 203 MLGVKPFQGVKNNDVIGRIENGERLPMPPNC---------PPTLYSLMTKCWAYDPSKRP 253
Query: 302 NPRSLVTAL 310
L L
Sbjct: 254 RFTELKAQL 262
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270 |
| >gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Score = 47.0 bits (112), Expect = 1e-05
Identities = 59/266 (22%), Positives = 100/266 (37%), Gaps = 27/266 (10%)
Query: 60 NIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLAN 117
++ G A VVY L N ++A+KR + + +E +A+ Q + +
Sbjct: 4 ELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVK 63
Query: 118 LLGCCCEGDERLLVAEYMPNDTLA---KHLFHWETQPMKW-AMRLRVALHIAEALEYCTS 173
GDE LV Y+ +L K + A L+ L + LEY S
Sbjct: 64 YYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVL---KGLEYLHS 120
Query: 174 KERALYHDLNAYRIVFDDDVNPRLSCFG----LMKNSRDGRSYSTNLAFTP----PEYLR 225
+ ++ D+ A I+ +D + +++ FG L R TP PE +
Sbjct: 121 NGQ-IHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVME 179
Query: 226 TGRVTPESV-MYSFGTLLLDLLSGK----HIPPSHALDLIRDRNIQTLTDSCLEGQFSSD 280
++SFG ++L +G PP L L + +L ++S
Sbjct: 180 QVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYSK- 238
Query: 281 EGTELVRLASRCLQYEPRERPNPRSL 306
++ S CLQ +P +RP L
Sbjct: 239 ---SFRKMISLCLQKDPSKRPTAEEL 261
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267 |
| >gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Score = 45.5 bits (108), Expect = 3e-05
Identities = 48/223 (21%), Positives = 92/223 (41%), Gaps = 16/223 (7%)
Query: 100 FLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLF-------HWETQPM 152
F E +L ++ + LLG C E + ++ EY L + L + P+
Sbjct: 55 FRRELDMFRKLSHKNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPL 114
Query: 153 KWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY 212
++ + IA +++ S R ++ DL A + ++S L K+ + Y
Sbjct: 115 STKQKVALCTQIALGMDH-LSNARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYY 173
Query: 213 STN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQT 267
L + PE ++ + +S ++SFG L+ ++ + +P L + +
Sbjct: 174 KLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFY---GLSDEEVLNR 230
Query: 268 LTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
L LE + L +L +RC P++RP+ LV+AL
Sbjct: 231 LQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSAL 273
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275 |
| >gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Score = 44.9 bits (106), Expect = 5e-05
Identities = 50/201 (24%), Positives = 97/201 (48%), Gaps = 27/201 (13%)
Query: 64 EHGEKAPNVVYKGKLE----NQFRIAVKRFNRSAWPDA--RQFLEEARAVGQLRNRRLAN 117
E GE V +G+L+ + +A+K +S + + R FL EA +GQ + + +
Sbjct: 16 EFGE-----VCRGRLKLPGKREIFVAIKTL-KSGYTEKQRRDFLSEASIMGQFDHPNIIH 69
Query: 118 LLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ--PMKWAMRLRVALHIAEALEYCTSKE 175
L G + +++ E+M N L L + Q ++ LR IA ++Y S+
Sbjct: 70 LEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLR---GIAAGMKY-LSEM 125
Query: 176 RALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS---YSTNLA------FTPPEYLRT 226
++ DL A I+ + ++ ++S FGL + D S Y+++L +T PE +
Sbjct: 126 NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAY 185
Query: 227 GRVTPESVMYSFGTLLLDLLS 247
+ T S ++S+G ++ +++S
Sbjct: 186 RKFTSASDVWSYGIVMWEVMS 206
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269 |
| >gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Score = 44.7 bits (105), Expect = 5e-05
Identities = 53/243 (21%), Positives = 104/243 (42%), Gaps = 19/243 (7%)
Query: 73 VYKGKLENQFR--IAVKRFN-RSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129
VYKG ++N+ + +A+K + A + +E + Q + + G +G +
Sbjct: 20 VYKG-IDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLW 78
Query: 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF 189
++ EY+ + L + P++ + I + L+Y S ER ++ D+ A ++
Sbjct: 79 IIMEYLGGGSALDLL---KPGPLEETYIATILREILKGLDYLHS-ERKIHRDIKAANVLL 134
Query: 190 DDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGTLLLDL 245
+ + +L+ FG+ D + TP PE ++ ++ ++S G ++L
Sbjct: 135 SEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIEL 194
Query: 246 LSGKHIPPSHALDLIRDRN-IQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPR 304
G+ PP+ L +R I + LEGQ+S CL +PR RP +
Sbjct: 195 AKGE--PPNSDLHPMRVLFLIPKNSPPTLEGQYSK----PFKEFVEACLNKDPRFRPTAK 248
Query: 305 SLV 307
L+
Sbjct: 249 ELL 251
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277 |
| >gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Score = 44.5 bits (105), Expect = 6e-05
Identities = 50/210 (23%), Positives = 88/210 (41%), Gaps = 27/210 (12%)
Query: 84 IAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAK 142
+AVK A +AR FL+E + + +L++ + LL C D ++ EYM N L +
Sbjct: 49 VAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQ 108
Query: 143 HLFHWETQP---------MKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV 193
L E Q + ++ + +A IA ++Y +S ++ DL + +
Sbjct: 109 FLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN-FVHRDLATRNCLVGKNY 167
Query: 194 NPRLSCFGLMKNSRDGRSYSTNLAFTPP------EYLRTGRVTPESVMYSFGTLLLDLLS 247
+++ FG+ +N G Y P E + G+ T S +++FG L ++L+
Sbjct: 168 TIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILT 227
Query: 248 -GKHIPPSHALD---------LIRDRNIQT 267
K P S D RD+ Q
Sbjct: 228 LCKEQPYSQLSDEQVIENTGEFFRDQGRQV 257
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296 |
| >gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Score = 43.9 bits (103), Expect = 1e-04
Identities = 38/174 (21%), Positives = 77/174 (44%), Gaps = 10/174 (5%)
Query: 84 IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKH 143
+A+K+ N P + E + +L+N + N L GDE +V EY+ +L
Sbjct: 47 VAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSLTDV 106
Query: 144 LFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLM 203
+ + A R L +ALE+ + + ++ D+ + ++ D + +L+ FG
Sbjct: 107 VTETCMDEAQIAAVCRECL---QALEFLHANQ-VIHRDIKSDNVLLGMDGSVKLTDFGFC 162
Query: 204 KNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPP 253
+S + + TP PE + P+ ++S G + ++++ G+ PP
Sbjct: 163 AQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGE--PP 214
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296 |
| >gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Score = 43.9 bits (103), Expect = 1e-04
Identities = 57/228 (25%), Positives = 94/228 (41%), Gaps = 16/228 (7%)
Query: 77 KLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL-LVAEYM 135
KLE + RI KR S + +Q LE+ N R L E + L LV M
Sbjct: 32 KLEKK-RIK-KRKGESMALNEKQILEKV-------NSRFVVSLAYAYETKDALCLVLTLM 82
Query: 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNP 195
L H++H + + A I LE +ER +Y DL I+ DD +
Sbjct: 83 NGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLED-LHQERIVYRDLKPENILLDDHGHI 141
Query: 196 RLSCFGLMKNSRDGRSYS---TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP 252
R+S GL + +G++ + + PE ++ R T ++ G LL ++++G+ P
Sbjct: 142 RISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQS-P 200
Query: 253 PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
I+ ++ L E ++S + L L +P+ER
Sbjct: 201 FQQRKKKIKREEVERLVKEVQE-EYSEKFSPDARSLCKMLLCKDPKER 247
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285 |
| >gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 43.6 bits (103), Expect = 1e-04
Identities = 58/247 (23%), Positives = 101/247 (40%), Gaps = 30/247 (12%)
Query: 84 IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER--LLVAEYMP----N 137
+AVK+ S R F E + L++ + G C R LV EY+P
Sbjct: 36 VAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLR 95
Query: 138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRL 197
D L KH + + + L A I + +EY SK R ++ DL I+ + + ++
Sbjct: 96 DYLQKHRERLDHRKL-----LLYASQICKGMEYLGSK-RYVHRDLATRNILVESENRVKI 149
Query: 198 SCFGLMKNSRDGRSYST-------NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKH 250
FGL K + Y + + PE L + + S ++SFG +L +L +
Sbjct: 150 GDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSD 209
Query: 251 I---PPSHALDLI-RDRNIQTLTDSCLE-----GQFSSDEG--TELVRLASRCLQYEPRE 299
PP+ + ++ D+ Q + +E G+ + G E+ + C +P +
Sbjct: 210 KSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQ 269
Query: 300 RPNPRSL 306
RP+ L
Sbjct: 270 RPSFSEL 276
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284 |
| >gnl|CDD|215568 PLN03088, PLN03088, SGT1, suppressor of G2 allele of SKP1; Provisional | Back alignment and domain information |
|---|
Score = 44.0 bits (104), Expect = 1e-04
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Query: 383 KKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVI 442
K AF DF +++ YTQ ID+ + +A R+ + + EA+ DA++A +
Sbjct: 7 DKAKEAFVDDDFALAVDLYTQAIDLDP-NNAELYADRAQANIKLGNFTEAVADANKAIEL 65
Query: 443 SPVWHMAAYLQAAALFALGKENEAQAALREASILE 477
P A + A L + A+AAL + + L
Sbjct: 66 DPSLAKAYLRKGTACMKLEEYQTAKAALEKGASLA 100
|
Length = 356 |
| >gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Score = 43.9 bits (103), Expect = 1e-04
Identities = 54/246 (21%), Positives = 104/246 (42%), Gaps = 40/246 (16%)
Query: 101 LEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHL---------FHWET-- 149
+E + +G+ +N + NLLG C + ++ EY L ++L + ++
Sbjct: 71 MEMMKMIGKHKN--IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIAR 128
Query: 150 ---QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK-- 204
+ M + + +A +EY S ++ ++ DL A ++ ++ +++ FGL +
Sbjct: 129 VPDEQMTFKDLVSCTYQVARGMEYLAS-QKCIHRDLAARNVLVTENNVMKIADFGLARDV 187
Query: 205 NSRDGRSYSTN----LAFTPPEYLRTGRVTPESVMYSFGTLLLDL--LSGK---HIPPSH 255
N+ D +TN + + PE L T +S ++SFG L+ ++ L G IP
Sbjct: 188 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE 247
Query: 256 ALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL---VT 312
L+++ + +C EL + C P RP + LV L +T
Sbjct: 248 LFKLLKEGHRMDKPANCT---------NELYMMMRDCWHAIPSHRPTFKQLVEDLDRILT 298
Query: 313 LQKDTE 318
L + E
Sbjct: 299 LTTNEE 304
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304 |
| >gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Score = 43.5 bits (102), Expect = 1e-04
Identities = 52/235 (22%), Positives = 97/235 (41%), Gaps = 37/235 (15%)
Query: 101 LEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHL--------------FH 146
+E + +G+ +N + NLLG C + ++ EY L ++L
Sbjct: 74 MEMMKMIGKHKN--IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQ 131
Query: 147 WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 206
+ + + + A +A +EY SK + ++ DL A ++ +D +++ FGL ++
Sbjct: 132 VPEEQLSFKDLVSCAYQVARGMEYLASK-KCIHRDLAARNVLVTEDNVMKIADFGLARDI 190
Query: 207 R--DGRSYSTN----LAFTPPEYLRTGRVTPESVMYSFGTLLLDL--LSGK---HIPPSH 255
D +TN + + PE L T +S ++SFG LL ++ L G +P
Sbjct: 191 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 250
Query: 256 ALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
L+++ + +C EL + C P +RP + LV L
Sbjct: 251 LFKLLKEGHRMDKPSNCTN---------ELYMMMRDCWHAVPSQRPTFKQLVEDL 296
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307 |
| >gnl|CDD|222112 pfam13414, TPR_11, TPR repeat | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 1e-04
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 382 KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYL-MSDMPQEALNDASQAQ 440
K G+ F+ D+ +IE Y + +++ + A+ +L+YL + +EAL D +A
Sbjct: 7 KNLGNALFKLGDYDEAIEAYEKALELDPD-NAEAYYNLALAYLKLGKDYEEALEDLEKAL 65
Query: 441 VISP 444
+ P
Sbjct: 66 ELDP 69
|
Length = 69 |
| >gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 43.2 bits (102), Expect = 2e-04
Identities = 44/200 (22%), Positives = 82/200 (41%), Gaps = 41/200 (20%)
Query: 73 VYKG-----KLENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGD 126
VYKG + + +A+K P A + L+EA + + + + LLG C
Sbjct: 23 VYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICL-SS 81
Query: 127 ERLLVAEYMP-----------NDTL-AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK 174
+ L+ + MP D + +++L +W Q IA+ + Y +
Sbjct: 82 QVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQ-------------IAKGMSYL--E 126
Query: 175 ERALYH-DLNAYRIVFDDDVNPRLSCFGLMKN-SRDGRSYSTNLAFTP-----PEYLRTG 227
E+ L H DL A ++ + +++ FGL K D + Y P E +
Sbjct: 127 EKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHR 186
Query: 228 RVTPESVMYSFGTLLLDLLS 247
T +S ++S+G + +L++
Sbjct: 187 IYTHKSDVWSYGVTVWELMT 206
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279 |
| >gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Score = 43.1 bits (101), Expect = 2e-04
Identities = 47/195 (24%), Positives = 90/195 (46%), Gaps = 17/195 (8%)
Query: 66 GEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLL 119
G A VYKG + +A+K N + P A +F++EA + + + L LL
Sbjct: 16 GSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLL 75
Query: 120 GCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALY 179
G C + LV + MP+ L ++ H + + L + IA+ + Y +ER L
Sbjct: 76 GVCLSPTIQ-LVTQLMPHGCLLDYV-HEHKDNIGSQLLLNWCVQIAKGMMYL--EERRLV 131
Query: 180 H-DLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAFTPPEYL-----RTGRVTPE 232
H DL A ++ + +++ FGL + D + Y+ + P +++ + T +
Sbjct: 132 HRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQ 191
Query: 233 SVMYSFGTLLLDLLS 247
S ++S+G + +L++
Sbjct: 192 SDVWSYGVTIWELMT 206
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303 |
| >gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Score = 42.6 bits (100), Expect = 2e-04
Identities = 41/161 (25%), Positives = 77/161 (47%), Gaps = 17/161 (10%)
Query: 98 RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT----LAKHLFHWETQPMK 153
R FL EA +GQ + + +L G + ++V EYM N + L KH + +
Sbjct: 50 RDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLV 109
Query: 154 WAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RS 211
+R IA ++Y S ++ DL A I+ + ++ ++S FGL + D +
Sbjct: 110 GMLR-----GIASGMKY-LSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAA 163
Query: 212 YSTN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS 247
Y+T + +T PE + + T S ++S+G ++ +++S
Sbjct: 164 YTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 204
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267 |
| >gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 42.1 bits (99), Expect = 4e-04
Identities = 39/164 (23%), Positives = 69/164 (42%), Gaps = 21/164 (12%)
Query: 159 RVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGL---MKNSRDGRSYSTN 215
++A+ + E L Y + R ++ D+ I+ + +L FG+ + NS T+
Sbjct: 107 KIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIADTFVGTS 166
Query: 216 LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGK------------HIPPSHALDLIRDR 263
+ PE ++ G+ T +S ++S G +++L GK P LDL++ +
Sbjct: 167 -TYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQ-Q 224
Query: 264 NIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLV 307
+Q F D L CL +P ERP P+ L
Sbjct: 225 IVQEPPPRLPSSDFPED----LRDFVDACLLKDPTERPTPQQLC 264
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284 |
| >gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 42.1 bits (100), Expect = 4e-04
Identities = 50/209 (23%), Positives = 79/209 (37%), Gaps = 44/209 (21%)
Query: 130 LVAEYMPND---TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR 186
+V EYM +D L + +K M+ + E L+Y S L+ D+
Sbjct: 77 MVFEYMDHDLTGLLDSPEVKFTESQIKCYMK-----QLLEGLQYLHSN-GILHRDIKGSN 130
Query: 187 IVFDDDVNPRLSCFGLMK--NSRDGRSYSTNLAFT----PPEYLRTG--RVTPESVMYSF 238
I+ ++D +L+ FGL + R+ Y TN T PPE L G R PE M+S
Sbjct: 131 ILINNDGVLKLADFGLARPYTKRNSADY-TNRVITLWYRPPELL-LGATRYGPEVDMWSV 188
Query: 239 GTLLLDLLSGKHIPP----SHALDLIRD-------------------RNIQ--TLTDSCL 273
G +L +L GK I L+ I + N++ L
Sbjct: 189 GCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRL 248
Query: 274 EGQFSSDEGTELVRLASRCLQYEPRERPN 302
F + L + L +P++R +
Sbjct: 249 REFFKHLIDPSALDLLDKLLTLDPKKRIS 277
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287 |
| >gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Score = 41.9 bits (98), Expect = 4e-04
Identities = 52/225 (23%), Positives = 92/225 (40%), Gaps = 35/225 (15%)
Query: 111 RNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHL--------------FHWETQPMKWAM 156
+++ + NLLG C + ++ EY L + L + + +
Sbjct: 76 KHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKD 135
Query: 157 RLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY--ST 214
+ A +A +EY S+ R ++ DL A ++ +D +++ FGL + D Y ++
Sbjct: 136 LVSCAYQVARGMEYLESR-RCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTS 194
Query: 215 N----LAFTPPEYLRTGRVTPESVMYSFGTLLLDL--LSGKH---IPPSHALDLIRDRNI 265
N + + PE L T +S ++SFG L+ ++ L G IP L+R+ +
Sbjct: 195 NGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKLLREGHR 254
Query: 266 QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
+C EL L C P +RP + LV AL
Sbjct: 255 MDKPSNCTH---------ELYMLMRECWHAVPTQRPTFKQLVEAL 290
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314 |
| >gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Score = 41.8 bits (98), Expect = 4e-04
Identities = 50/231 (21%), Positives = 101/231 (43%), Gaps = 34/231 (14%)
Query: 110 LRNRRLANLL---GCCCEGDER--LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHI 164
LRN N++ G C E L+ E++P+ +L ++L + +L+ A+ I
Sbjct: 60 LRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPR-NKNKINLKQQLKYAVQI 118
Query: 165 AEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST-------NLA 217
+ ++Y S++ ++ DL A ++ + + ++ FGL K + Y T +
Sbjct: 119 CKGMDYLGSRQY-VHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVF 177
Query: 218 FTPPEYLRTGRVTPESVMYSFGTLLLDLLSG------------KHIPPSHALDLIRDRNI 265
+ PE L + S ++SFG L +LL+ K I P+H + R +
Sbjct: 178 WYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHG-QMTVTRLV 236
Query: 266 QTLTDSCLEGQ---FSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL 313
+ L EG+ + E+ +L +C +++P +R ++L+ +
Sbjct: 237 RVLE----EGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284 |
| >gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Score = 41.6 bits (97), Expect = 5e-04
Identities = 42/193 (21%), Positives = 82/193 (42%), Gaps = 11/193 (5%)
Query: 66 GEKAPNVVYKG-KLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE 124
G+ A VY + +A+++ N P + E + + +N + N L
Sbjct: 29 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 88
Query: 125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 184
GDE +V EY+ +L + + A R L +ALE+ S + ++ D+ +
Sbjct: 89 GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALEFLHSNQ-VIHRDIKS 144
Query: 185 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGT 240
I+ D + +L+ FG +S + + TP PE + P+ ++S G
Sbjct: 145 DNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 204
Query: 241 LLLDLLSGKHIPP 253
+ ++++ G+ PP
Sbjct: 205 MAIEMIEGE--PP 215
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296 |
| >gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Score = 41.6 bits (97), Expect = 6e-04
Identities = 42/193 (21%), Positives = 82/193 (42%), Gaps = 11/193 (5%)
Query: 66 GEKAPNVVYKG-KLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE 124
G+ A VY + +A+K+ N P + E + + +N + N L
Sbjct: 28 GQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 87
Query: 125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 184
GDE +V EY+ +L + + A R L +AL++ S + ++ D+ +
Sbjct: 88 GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALDFLHSNQ-VIHRDIKS 143
Query: 185 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGT 240
I+ D + +L+ FG +S + + TP PE + P+ ++S G
Sbjct: 144 DNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 203
Query: 241 LLLDLLSGKHIPP 253
+ ++++ G+ PP
Sbjct: 204 MAIEMVEGE--PP 214
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297 |
| >gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Score = 41.0 bits (96), Expect = 6e-04
Identities = 47/182 (25%), Positives = 77/182 (42%), Gaps = 26/182 (14%)
Query: 126 DERLLVAEYMPNDTLAKHLFHW----ETQPMKWAMRLRVALHIAEALEYCTSKERALYHD 181
D LV ++ L H+ + E +WA + VAL +AL +E + D
Sbjct: 58 DSVFLVLQHAEGGKLWSHISKFLNIPEECVKRWAAEMVVAL---DALH----REGIVCRD 110
Query: 182 LNAYRIVFDDDVNPRLSCFGL---MKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSF 238
LN I+ DD + +L+ F +++S DG + + PE T +S
Sbjct: 111 LNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVEN--MYCAPEVGGISEETEACDWWSL 168
Query: 239 GTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPR 298
G +L +LL+GK + H I T T + ++ S+E L+ + LQ+ P
Sbjct: 169 GAILFELLTGKTLVECHP------SGINTHTTLNIP-EWVSEEARSLL---QQLLQFNPT 218
Query: 299 ER 300
ER
Sbjct: 219 ER 220
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237 |
| >gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 0.001
Identities = 54/247 (21%), Positives = 100/247 (40%), Gaps = 20/247 (8%)
Query: 76 GKLENQFRIAVKRFNRSAWPDARQFL-EEARAVGQLRNR-RLANLLGCCCEGDERLLVAE 133
K + ++AVK +A R+ L E + + L N + NLLG C G L++ E
Sbjct: 60 SKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPILVITE 119
Query: 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV 193
Y L L + L + +A+ + + SK ++ DL A ++
Sbjct: 120 YCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKN-CIHRDLAARNVLLTHGK 178
Query: 194 NPRLSCFGLMKNSRDGRSY-STNLAFTP-----PEYLRTGRVTPESVMYSFGTLLLDLLS 247
++ FGL ++ + +Y A P PE + T ES ++S+G LL ++ S
Sbjct: 179 IVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFS 238
Query: 248 -GKHIPPSHALDLIRDRNIQTLTDS---CLEGQFSSDEGTELVRLASRCLQYEPRERPNP 303
G + P + D L + + + E ++++ C +P +RP
Sbjct: 239 LGSNPYP----GMPVDSKFYKLIKEGYRMAQPEHAPAEIYDIMK---TCWDADPLKRPTF 291
Query: 304 RSLVTAL 310
+ +V +
Sbjct: 292 KQIVQLI 298
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302 |
| >gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Score = 40.6 bits (95), Expect = 0.001
Identities = 47/210 (22%), Positives = 80/210 (38%), Gaps = 30/210 (14%)
Query: 83 RIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLA 141
R+ VK SA PD + FL+E + +L + + LG C E LLV E+ P L
Sbjct: 24 RVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGDLK 83
Query: 142 KHL------FHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNP 195
+L Q + R+A +A L + + ++ DL D++
Sbjct: 84 NYLRSNRGMVAQMAQKD---VLQRMACEVASGLLW-LHQADFIHSDLALRNCQLTADLSV 139
Query: 196 RLSCFGLMKNSRDGRSYSTN------LAFTPPEY-------LRTGRVTPESVMYSFGTLL 242
++ +GL Y T L + PE L T +S ++S G +
Sbjct: 140 KIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTM 199
Query: 243 LDLLSGKHIPPSHALDL------IRDRNIQ 266
+L + P D +R+++I+
Sbjct: 200 WELFTAADQPYPDLSDEQVLKQVVREQDIK 229
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269 |
| >gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Score = 40.6 bits (95), Expect = 0.001
Identities = 45/202 (22%), Positives = 77/202 (38%), Gaps = 26/202 (12%)
Query: 72 VVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130
+VY + L Q RIA+K + EE L++R + LG E +
Sbjct: 23 IVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKI 82
Query: 131 VAEYMPNDTLAKHL-FHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLN-AYRIV 188
E +P +L+ L W + I E L+Y HD +R +
Sbjct: 83 FMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKY--------LHDNQIVHRDI 134
Query: 189 FDDDV--NP-----RLSCFGLMKN----SRDGRSYSTNLAFTPPEYLRTGR--VTPESVM 235
D+V N ++S FG K + +++ L + PE + G + +
Sbjct: 135 KGDNVLVNTYSGVVKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADI 194
Query: 236 YSFGTLLLDLLSGKHIPPSHAL 257
+S G ++++ +GK PP L
Sbjct: 195 WSLGCTIVEMATGK--PPFIEL 214
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268 |
| >gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Score = 40.4 bits (94), Expect = 0.001
Identities = 57/283 (20%), Positives = 111/283 (39%), Gaps = 42/283 (14%)
Query: 62 VSEHGEKAPNVVYKGKL------ENQFRIAVKRF-NRSAWPDARQFLEEARAVGQLRNRR 114
+ E GE VYKG L E +A+K +++ P +F EA +L++
Sbjct: 10 MEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPN 69
Query: 115 LANLLGCCCEGDERLLVAEYMPNDTLAKHLF----HWET------QPMKWAMR----LRV 160
+ LLG + ++ Y + L + L H + + +K + + +
Sbjct: 70 IVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHI 129
Query: 161 ALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST------ 214
IA +E+ +S ++ DL ++ D +N ++S GL + Y
Sbjct: 130 VTQIAAGMEFLSS-HHVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMGNSLL 188
Query: 215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLT 269
+ + PE + G+ + +S ++S+G +L ++ S P +++IR+R +
Sbjct: 189 PIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRNRQVLPCP 248
Query: 270 DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVT 312
D C + L C P RP + + + L T
Sbjct: 249 DDC---------PAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283 |
| >gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Score = 40.2 bits (94), Expect = 0.001
Identities = 36/174 (20%), Positives = 67/174 (38%), Gaps = 6/174 (3%)
Query: 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF 189
LV M L H+++ A + A I LE+ + R +Y DL ++
Sbjct: 70 LVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEH-LHQRRIVYRDLKPENVLL 128
Query: 190 DDDVNPRLSCFGL---MKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLL 246
DD N R+S GL +K + + + + PE L+ ++ G L +++
Sbjct: 129 DDHGNVRISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMI 188
Query: 247 SGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
+G P + + ++ T + ++ E L LQ +P +R
Sbjct: 189 AG-RSPFRQRKEKVEKEELKRRTLE-MAVEYPDKFSPEAKDLCEALLQKDPEKR 240
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277 |
| >gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 40.1 bits (94), Expect = 0.002
Identities = 54/235 (22%), Positives = 96/235 (40%), Gaps = 37/235 (15%)
Query: 101 LEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM--------------PNDTLAKHLFH 146
+E + +G+ +N + NLLG C + +V EY P + +
Sbjct: 66 MEMMKMIGKHKN--IINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPR 123
Query: 147 WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 206
+ + + A +A +E+ SK + ++ DL A ++ +D +++ FGL ++
Sbjct: 124 PPEETLTQKDLVSFAYQVARGMEFLASK-KCIHRDLAARNVLVTEDHVMKIADFGLARDI 182
Query: 207 RDGRSY--STN----LAFTPPEYLRTGRVTPESVMYSFGTLLLDL--LSGKHIP--PSHA 256
Y +TN + + PE L T +S ++SFG LL ++ L G P P
Sbjct: 183 HHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE 242
Query: 257 L-DLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
L L+++ +C + EL L C P +RP + LV L
Sbjct: 243 LFKLLKEGYRMEKPQNCTQ---------ELYHLMRDCWHEVPSQRPTFKQLVEDL 288
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293 |
| >gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Score = 40.0 bits (93), Expect = 0.002
Identities = 57/263 (21%), Positives = 108/263 (41%), Gaps = 19/263 (7%)
Query: 66 GEKAPNVVYKGKL----EN-QFRIAVKRFNRSAWPDA-RQFLEEARAVGQLRNRRLANLL 119
G A VYKG EN + +A+K + P A ++ L+EA + + + + LL
Sbjct: 16 GSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLL 75
Query: 120 GCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALY 179
G C +L V + MP L ++ + + + L + IA+ + Y + R ++
Sbjct: 76 GICLTSTVQL-VTQLMPYGCLLDYVRENKDRIGSQDL-LNWCVQIAKGMSY-LEEVRLVH 132
Query: 180 HDLNAYRIVFDDDVNPRLSCFGLMKN-SRDGRSYSTNLAFTPPEYLRTG-----RVTPES 233
DL A ++ + +++ FGL + D Y + P +++ R T +S
Sbjct: 133 RDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQS 192
Query: 234 VMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 293
++S+G + +L++ P D I R I L + ++ + +C
Sbjct: 193 DVWSYGVTVWELMTFGAKP----YDGIPAREIPDLLEKGERLPQPPICTIDVYMIMVKCW 248
Query: 294 QYEPRERPNPRSLVTALVTLQKD 316
+ RP R LV + +D
Sbjct: 249 MIDSECRPRFRELVDEFSRMARD 271
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279 |
| >gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 39.7 bits (93), Expect = 0.002
Identities = 52/186 (27%), Positives = 81/186 (43%), Gaps = 34/186 (18%)
Query: 103 EARAVGQLRNRRLANLLGCCCEGDERLL--VAEYMPNDTLAKHLFHWETQPMKWAMRLRV 160
E R + ++ + + L E D+R L + EY+P L +L + + L
Sbjct: 51 EKRVLKEVSHPFIIRLF--WTEHDQRFLYMLMEYVPGGELFSYLRNSGR--FSNSTGLFY 106
Query: 161 ALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP 220
A I ALEY SKE +Y DL I+ D + + +L+ FG K RD R+++ L T
Sbjct: 107 ASEIVCALEYLHSKE-IVYRDLKPENILLDKEGHIKLTDFGFAKKLRD-RTWT--LCGT- 161
Query: 221 PEYLRTGRVTPESVM----------YSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTD 270
PEYL PE + ++ G L+ ++L G PP D N + +
Sbjct: 162 PEYL-----APEVIQSKGHNKAVDWWALGILIYEMLVG--YPP------FFDDNPFGIYE 208
Query: 271 SCLEGQ 276
L G+
Sbjct: 209 KILAGK 214
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291 |
| >gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Score = 39.5 bits (92), Expect = 0.003
Identities = 43/193 (22%), Positives = 82/193 (42%), Gaps = 11/193 (5%)
Query: 66 GEKAPNVVYKG-KLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE 124
G+ A VY + +A+K+ N P + E + + ++ + N L
Sbjct: 28 GQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLV 87
Query: 125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 184
GDE +V EY+ +L + ET M V +ALE+ S + ++ D+ +
Sbjct: 88 GDELWVVMEYLAGGSLTDVVT--ETC-MDEGQIAAVCRECLQALEFLHSNQ-VIHRDIKS 143
Query: 185 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGT 240
I+ D + +L+ FG +S + + TP PE + P+ ++S G
Sbjct: 144 DNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 203
Query: 241 LLLDLLSGKHIPP 253
+ ++++ G+ PP
Sbjct: 204 MAIEMVEGE--PP 214
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293 |
| >gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Score = 39.2 bits (92), Expect = 0.003
Identities = 35/147 (23%), Positives = 67/147 (45%), Gaps = 16/147 (10%)
Query: 168 LEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEY 223
LEY S + ++ D+ A I+ +++ +L+ FG+ D + + TP PE
Sbjct: 112 LEYLHSN-KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEV 170
Query: 224 LRTGRVTPESVMYSFGTLLLDLLSGK----HIPPSHALDLIRDRNIQTLTDSCLEGQFSS 279
++ ++ ++S G +++ GK I P A+ +I ++ TL+D ++S
Sbjct: 171 IQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDP---EKWS- 226
Query: 280 DEGTELVRLASRCLQYEPRERPNPRSL 306
E +CL +P ERP+ L
Sbjct: 227 ---PEFNDFVKKCLVKDPEERPSAIQL 250
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256 |
| >gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Score = 39.1 bits (91), Expect = 0.004
Identities = 46/164 (28%), Positives = 71/164 (43%), Gaps = 13/164 (7%)
Query: 96 DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL-VAEYMPNDTLAKHLFHWETQPMKW 154
D + E R + RN L CC + +RL V E++ L +FH +
Sbjct: 38 DVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGGDL---MFHIQKSRRFD 94
Query: 155 AMRLRV-ALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS-RDGRSY 212
R R A I AL + K +Y DL ++ D + + +L+ FG+ K +G++
Sbjct: 95 EARARFYAAEITSALMFLHDKG-IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTT 153
Query: 213 STNLAFTP----PEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP 252
ST TP PE L+ P ++ G LL ++L G H P
Sbjct: 154 ST-FCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCG-HAP 195
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320 |
| >gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Score = 38.9 bits (91), Expect = 0.004
Identities = 57/252 (22%), Positives = 99/252 (39%), Gaps = 49/252 (19%)
Query: 84 IAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAK 142
+AVK A +AR+ FL+E + + +L + +A LLG C ++ EYM N L +
Sbjct: 49 VAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQ 108
Query: 143 HLFHWETQPMKWAMRLR---------VALHIAEALEYCTSKERALYH-DLNAYRIVFDDD 192
L + A + +A IA + Y S H DL + +
Sbjct: 109 FLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLN--FVHRDLATRNCLVGKN 166
Query: 193 VNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLR--------TGRVTPESVMYSFGTLLLD 244
+++ FG M + Y + P +R G+ T +S +++FG L +
Sbjct: 167 YTIKIADFG-MSRNLYSSDYY-RVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWE 224
Query: 245 LLSGKHIPPSHALDLIRDRNIQTLTD-SCLE--GQFSSDEGT------------ELVRLA 289
+L+ L R++ + LTD +E G F D+G ++ L
Sbjct: 225 ILT-----------LCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELM 273
Query: 290 SRCLQYEPRERP 301
C + + +RP
Sbjct: 274 LECWRRDEEDRP 285
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296 |
| >gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Score = 38.6 bits (90), Expect = 0.004
Identities = 48/199 (24%), Positives = 78/199 (39%), Gaps = 23/199 (11%)
Query: 61 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG 120
+V + G +Y K+ + I K RQ LE R R L L
Sbjct: 18 LVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVR-----RCPFLVTLH- 71
Query: 121 CCCEGDERL-LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAE---ALEYCTSKER 176
+ D +L L+ +Y+ L HL+ E V ++IAE AL+ +
Sbjct: 72 YAFQTDTKLHLILDYVNGGELFTHLYQREHFTES-----EVRVYIAEIVLALD-HLHQLG 125
Query: 177 ALYHDLNAYRIVFDDDVNPRLSCFGLMK-----NSRDGRSYSTNLAFTPPEYLRTGRVTP 231
+Y D+ I+ D + + L+ FGL K S+ + + PE +R G
Sbjct: 126 IIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGH 185
Query: 232 ESVM--YSFGTLLLDLLSG 248
+ + +S G L +LL+G
Sbjct: 186 DKAVDWWSLGVLTFELLTG 204
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 484 | |||
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 100.0 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 100.0 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 100.0 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 100.0 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 100.0 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 100.0 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 100.0 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 100.0 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 100.0 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 100.0 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 100.0 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 100.0 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 100.0 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 100.0 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 100.0 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 100.0 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 100.0 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 100.0 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 100.0 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 100.0 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 100.0 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 100.0 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 100.0 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 100.0 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 100.0 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 100.0 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 100.0 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 100.0 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 100.0 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 100.0 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 100.0 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 100.0 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 100.0 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 100.0 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 100.0 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 100.0 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 100.0 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 100.0 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 100.0 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 100.0 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 100.0 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 100.0 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 100.0 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 100.0 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 100.0 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 100.0 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 100.0 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 100.0 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 100.0 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 100.0 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 100.0 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 100.0 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 100.0 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 100.0 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 100.0 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 100.0 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 100.0 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 100.0 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 100.0 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 100.0 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 100.0 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 100.0 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 100.0 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 100.0 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 100.0 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 100.0 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 100.0 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 100.0 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 100.0 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 100.0 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 100.0 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 100.0 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 100.0 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 100.0 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 100.0 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 100.0 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 100.0 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 100.0 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 100.0 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 100.0 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 100.0 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 100.0 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 100.0 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 100.0 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 100.0 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 100.0 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 100.0 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 100.0 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 100.0 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 100.0 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 100.0 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 100.0 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 100.0 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 100.0 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 100.0 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 100.0 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 100.0 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 100.0 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 100.0 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 100.0 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 100.0 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 100.0 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 100.0 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 100.0 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 100.0 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 100.0 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 100.0 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 100.0 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 100.0 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 100.0 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 100.0 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 100.0 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 100.0 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 100.0 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 100.0 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 100.0 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 100.0 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 100.0 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 100.0 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 100.0 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 100.0 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 100.0 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 100.0 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 100.0 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 100.0 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 100.0 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 100.0 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 100.0 | |
| PTZ00284 | 467 | protein kinase; Provisional | 100.0 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 100.0 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 100.0 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 100.0 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 100.0 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 100.0 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 100.0 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 100.0 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 100.0 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 100.0 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 100.0 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 100.0 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 100.0 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 100.0 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 100.0 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 100.0 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 100.0 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 100.0 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 100.0 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 100.0 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 100.0 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 100.0 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 100.0 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 100.0 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 100.0 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 100.0 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 100.0 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 100.0 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 100.0 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 100.0 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 100.0 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 100.0 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 100.0 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 100.0 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 100.0 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 100.0 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 100.0 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 100.0 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 100.0 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 100.0 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 100.0 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 100.0 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 100.0 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 100.0 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 100.0 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 100.0 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 100.0 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 100.0 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 100.0 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 100.0 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 100.0 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 100.0 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 100.0 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 100.0 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 100.0 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 100.0 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 100.0 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 100.0 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 100.0 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 100.0 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 100.0 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 100.0 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 100.0 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 100.0 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 100.0 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 100.0 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 100.0 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 100.0 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 100.0 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 100.0 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 100.0 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 100.0 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 100.0 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 100.0 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 100.0 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 100.0 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 100.0 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 100.0 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 100.0 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 99.98 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.98 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.97 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.97 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.97 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.97 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 99.97 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.97 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.97 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.96 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.95 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.95 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.94 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.93 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.93 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.93 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.92 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.91 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.9 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.9 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.89 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.89 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.87 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.87 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.86 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 99.86 | |
| KOG0553 | 304 | consensus TPR repeat-containing protein [General f | 99.85 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 99.84 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 99.83 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.83 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.81 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.81 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 99.8 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.79 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 99.79 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.78 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.77 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 99.73 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.72 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 99.72 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.71 | |
| KOG0548 | 539 | consensus Molecular co-chaperone STI1 [Posttransla | 99.69 | |
| KOG4234 | 271 | consensus TPR repeat-containing protein [General f | 99.68 | |
| KOG0548 | 539 | consensus Molecular co-chaperone STI1 [Posttransla | 99.63 | |
| PRK15359 | 144 | type III secretion system chaperone protein SscB; | 99.63 | |
| KOG0543 | 397 | consensus FKBP-type peptidyl-prolyl cis-trans isom | 99.61 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.6 | |
| KOG4648 | 536 | consensus Uncharacterized conserved protein, conta | 99.6 | |
| KOG0547 | 606 | consensus Translocase of outer mitochondrial membr | 99.59 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 99.59 | |
| PLN03088 | 356 | SGT1, suppressor of G2 allele of SKP1; Provisional | 99.58 | |
| PRK15363 | 157 | pathogenicity island 2 chaperone protein SscA; Pro | 99.56 | |
| KOG0550 | 486 | consensus Molecular chaperone (DnaJ superfamily) [ | 99.51 | |
| PRK11189 | 296 | lipoprotein NlpI; Provisional | 99.51 | |
| KOG1266 | 458 | consensus Protein kinase [Signal transduction mech | 99.5 | |
| TIGR02552 | 135 | LcrH_SycD type III secretion low calcium response | 99.5 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 99.49 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 99.47 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.47 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 99.45 | |
| PRK10370 | 198 | formate-dependent nitrite reductase complex subuni | 99.45 | |
| KOG0551 | 390 | consensus Hsp90 co-chaperone CNS1 (contains TPR re | 99.45 | |
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 99.43 | |
| KOG0545 | 329 | consensus Aryl-hydrocarbon receptor-interacting pr | 99.43 | |
| KOG4626 | 966 | consensus O-linked N-acetylglucosamine transferase | 99.42 | |
| KOG4555 | 175 | consensus TPR repeat-containing protein [Function | 99.39 | |
| KOG4642 | 284 | consensus Chaperone-dependent E3 ubiquitin protein | 99.39 | |
| TIGR00990 | 615 | 3a0801s09 mitochondrial precursor proteins import | 99.38 | |
| PF13414 | 69 | TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A | 99.37 | |
| KOG0624 | 504 | consensus dsRNA-activated protein kinase inhibitor | 99.35 | |
| KOG1125 | 579 | consensus TPR repeat-containing protein [General f | 99.34 | |
| KOG0376 | 476 | consensus Serine-threonine phosphatase 2A, catalyt | 99.34 | |
| cd05154 | 223 | ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an | 99.33 | |
| KOG1308 | 377 | consensus Hsp70-interacting protein Hip/Transient | 99.32 | |
| KOG4626 | 966 | consensus O-linked N-acetylglucosamine transferase | 99.32 | |
| COG3642 | 204 | Mn2+-dependent serine/threonine protein kinase [Si | 99.31 | |
| PF13414 | 69 | TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A | 99.3 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.29 | |
| KOG3087 | 229 | consensus Serine/threonine protein kinase [General | 99.28 | |
| KOG3741 | 655 | consensus Poly(A) ribonuclease subunit [RNA proces | 99.27 | |
| TIGR00990 | 615 | 3a0801s09 mitochondrial precursor proteins import | 99.26 | |
| TIGR02795 | 119 | tol_pal_ybgF tol-pal system protein YbgF. Members | 99.25 | |
| PF12895 | 84 | Apc3: Anaphase-promoting complex, cyclosome, subun | 99.25 | |
| PRK02603 | 172 | photosystem I assembly protein Ycf3; Provisional | 99.24 | |
| PRK11189 | 296 | lipoprotein NlpI; Provisional | 99.24 | |
| cd00189 | 100 | TPR Tetratricopeptide repeat domain; typically con | 99.24 | |
| PRK15359 | 144 | type III secretion system chaperone protein SscB; | 99.23 | |
| COG3063 | 250 | PilF Tfp pilus assembly protein PilF [Cell motilit | 99.22 | |
| KOG0547 | 606 | consensus Translocase of outer mitochondrial membr | 99.22 | |
| PLN02789 | 320 | farnesyltranstransferase | 99.21 | |
| CHL00033 | 168 | ycf3 photosystem I assembly protein Ycf3 | 99.2 | |
| PRK09782 | 987 | bacteriophage N4 receptor, outer membrane subunit; | 99.2 | |
| PRK12370 | 553 | invasion protein regulator; Provisional | 99.18 | |
| KOG1126 | 638 | consensus DNA-binding cell division cycle control | 99.14 | |
| PRK15123 | 268 | lipopolysaccharide core heptose(I) kinase RfaP; Pr | 99.14 | |
| PRK12370 | 553 | invasion protein regulator; Provisional | 99.13 | |
| PRK15331 | 165 | chaperone protein SicA; Provisional | 99.13 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.12 | |
| KOG1126 | 638 | consensus DNA-binding cell division cycle control | 99.11 | |
| PF13432 | 65 | TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL | 99.1 | |
| PF01163 | 188 | RIO1: RIO1 family; InterPro: IPR018934 Protein pho | 99.09 | |
| COG3063 | 250 | PilF Tfp pilus assembly protein PilF [Cell motilit | 99.08 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 99.08 | |
| PRK10370 | 198 | formate-dependent nitrite reductase complex subuni | 99.07 | |
| KOG2137 | 700 | consensus Protein kinase [Signal transduction mech | 99.06 | |
| TIGR03302 | 235 | OM_YfiO outer membrane assembly lipoprotein YfiO. | 99.06 |
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-55 Score=402.06 Aligned_cols=253 Identities=17% Similarity=0.245 Sum_probs=212.8
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCc-eEEEEe
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDE-RLLVAE 133 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~-~~lv~E 133 (484)
++.+.++.||+|..|+|||+.+ .+++.+|+|.+...... ..+++.+|+++++.++||+||.++|.|...+. ..|+||
T Consensus 79 ~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mE 158 (364)
T KOG0581|consen 79 SDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICME 158 (364)
T ss_pred HHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehh
Confidence 3556778899999999999995 57899999999654433 36789999999999999999999999999995 999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC--Cc
Q 011519 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RS 211 (484)
Q Consensus 134 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~--~~ 211 (484)
||++|||++++. ..+.+++....+|+.+|++||.|||+..+||||||||+|||++..|.|||||||.++...++ .+
T Consensus 159 YMDgGSLd~~~k--~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS~a~t 236 (364)
T KOG0581|consen 159 YMDGGSLDDILK--RVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNSIANT 236 (364)
T ss_pred hcCCCCHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhhhhhccc
Confidence 999999999997 34679999999999999999999997449999999999999999999999999999876654 67
Q ss_pred ccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhh-ccccccccccccCCCChH-HHHHHHHHH
Q 011519 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD-RNIQTLTDSCLEGQFSSD-EGTELVRLA 289 (484)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~l~~li 289 (484)
+.||..|||||.+++..|+.++||||||++++|+.+|+.|++......... ..+..+.. ...+..|.. +++++++|+
T Consensus 237 fvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~-~ppP~lP~~~fS~ef~~FV 315 (364)
T KOG0581|consen 237 FVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVD-EPPPRLPEGEFSPEFRSFV 315 (364)
T ss_pred ccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhc-CCCCCCCcccCCHHHHHHH
Confidence 899999999999999999999999999999999999999876540000000 00111111 112334554 789999999
Q ss_pred HHHhccCCCCCCChHHHHHHHHh
Q 011519 290 SRCLQYEPRERPNPRSLVTALVT 312 (484)
Q Consensus 290 ~~cl~~dp~~Rps~~~il~~l~~ 312 (484)
..||++||.+|||+.++++|-+-
T Consensus 316 ~~CL~Kdp~~R~s~~qLl~Hpfi 338 (364)
T KOG0581|consen 316 SCCLRKDPSERPSAKQLLQHPFI 338 (364)
T ss_pred HHHhcCCcccCCCHHHHhcCHHH
Confidence 99999999999999999999543
|
|
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-53 Score=413.72 Aligned_cols=274 Identities=35% Similarity=0.621 Sum_probs=236.0
Q ss_pred cccccCHHHHHHHhcCCCcccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeee
Q 011519 40 VFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 119 (484)
Q Consensus 40 ~~~~~~~~~~~~~~~~f~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~ 119 (484)
..+.|++.++..+|+||+..+++ |+|+||+||+|.+.+|+.||||++........++|.+|+.++.+++|||+|+|+
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~i---g~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~Ll 137 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLI---GEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLL 137 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcce---ecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEE
Confidence 56779999999999999999888 999999999999999899999988766543145699999999999999999999
Q ss_pred eeeeeCC-ceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCC--CcccccccccceeecCCCCce
Q 011519 120 GCCCEGD-ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE--RALYHDLNAYRIVFDDDVNPR 196 (484)
Q Consensus 120 ~~~~~~~-~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~--~ivH~Dlkp~Nill~~~~~~k 196 (484)
|||.+.+ +.+||+||+++|||.++|+.....+++|..+++|+.++|+||+|||+.. .||||||||+|||+|+++++|
T Consensus 138 GyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aK 217 (361)
T KOG1187|consen 138 GYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAK 217 (361)
T ss_pred EEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEE
Confidence 9999998 5999999999999999997533328999999999999999999999963 499999999999999999999
Q ss_pred eeccCCccccCC-CCcc----cCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCch-----------hhHHh
Q 011519 197 LSCFGLMKNSRD-GRSY----STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH-----------ALDLI 260 (484)
Q Consensus 197 l~DfG~a~~~~~-~~~~----~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~-----------~~~~~ 260 (484)
|+|||+++.... .... .||.+|+|||++..+..+.++|||||||+|+||+||+.+.... ....+
T Consensus 218 lsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~ 297 (361)
T KOG1187|consen 218 LSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLL 297 (361)
T ss_pred ccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHH
Confidence 999999977664 3322 7999999999999999999999999999999999999765421 12233
Q ss_pred hhcccccccccccc-CCCCh-HHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhcC
Q 011519 261 RDRNIQTLTDSCLE-GQFSS-DEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316 (484)
Q Consensus 261 ~~~~~~~~~~~~~~-~~~~~-~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 316 (484)
....+..++++.+. +.++. .....+..++.+|++.+|..||+|.+|++.|+.+...
T Consensus 298 ~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~~ 355 (361)
T KOG1187|consen 298 EEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILSL 355 (361)
T ss_pred HCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhccc
Confidence 44567778888765 55554 5677799999999999999999999999999665543
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-51 Score=397.12 Aligned_cols=254 Identities=27% Similarity=0.396 Sum_probs=215.0
Q ss_pred cccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCcc--HHHHHHHHHHHhcCCCCceeeeeeeeeeCC-ceEEEEecCC
Q 011519 60 NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLGCCCEGD-ERLLVAEYMP 136 (484)
Q Consensus 60 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~hpniv~l~~~~~~~~-~~~lv~Ey~~ 136 (484)
.+...+|.|+||+||+|.+.....||||++....... .+.|.+|+.+|.+++|||||+++|++.... .+.|||||++
T Consensus 44 ~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~ 123 (362)
T KOG0192|consen 44 PIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMP 123 (362)
T ss_pred hhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCC
Confidence 3344579999999999999766669999998755433 458999999999999999999999999887 7999999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC-cccccccccceeecCCC-CceeeccCCccccCC----CC
Q 011519 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKER-ALYHDLNAYRIVFDDDV-NPRLSCFGLMKNSRD----GR 210 (484)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~-ivH~Dlkp~Nill~~~~-~~kl~DfG~a~~~~~----~~ 210 (484)
+|+|.+++.....+.+++..++.|+.||++||.|||+. + ||||||||+|||++.++ ++||+|||+++.... .+
T Consensus 124 ~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~-~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~~~~~ 202 (362)
T KOG0192|consen 124 GGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSE-GPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISKTSMT 202 (362)
T ss_pred CCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC-CCeeecccChhhEEEcCCCCEEEECCCccceeecccccccc
Confidence 99999999754467899999999999999999999999 8 99999999999999997 999999999987553 23
Q ss_pred cccCCCCCCCccccc--CCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHH
Q 011519 211 SYSTNLAFTPPEYLR--TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288 (484)
Q Consensus 211 ~~~~t~~y~aPE~~~--~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 288 (484)
...||+.|||||++. ...++.|+||||||+++|||+||+.||.....-... ..+.....+..++..+++.+..|
T Consensus 203 ~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~----~~v~~~~~Rp~~p~~~~~~l~~l 278 (362)
T KOG0192|consen 203 SVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVA----SAVVVGGLRPPIPKECPPHLSSL 278 (362)
T ss_pred CCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHH----HHHHhcCCCCCCCccCCHHHHHH
Confidence 468999999999999 568999999999999999999999888754321111 11222223344556678899999
Q ss_pred HHHHhccCCCCCCChHHHHHHHHhhhcCCC
Q 011519 289 ASRCLQYEPRERPNPRSLVTALVTLQKDTE 318 (484)
Q Consensus 289 i~~cl~~dp~~Rps~~~il~~l~~~~~~~~ 318 (484)
+..||..||..||++.+++..|+.+.....
T Consensus 279 ~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~ 308 (362)
T KOG0192|consen 279 MERCWLVDPSRRPSFLEIVSRLESIMSHIS 308 (362)
T ss_pred HHHhCCCCCCcCCCHHHHHHHHHHHHHhhc
Confidence 999999999999999999999998876543
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-52 Score=386.64 Aligned_cols=251 Identities=17% Similarity=0.220 Sum_probs=209.7
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCcc-------HHHHHHHHHHHhcCCCCceeeeeeeeeeCCce
Q 011519 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD-------ARQFLEEARAVGQLRNRRLANLLGCCCEGDER 128 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~-------~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 128 (484)
+.|.+.+.||.|+||.|-+|. ..+|+.||||++++..... .....+|+++|++|+|||||+++++|...+..
T Consensus 172 d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~ 251 (475)
T KOG0615|consen 172 DYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSS 251 (475)
T ss_pred ceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCce
Confidence 456667889999999999999 6789999999997643222 23467999999999999999999999999999
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCC---CCceeeccCCccc
Q 011519 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD---VNPRLSCFGLMKN 205 (484)
Q Consensus 129 ~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~---~~~kl~DfG~a~~ 205 (484)
||||||++||+|.+++- .++.+.+.....++.|++.|+.|||++ ||+||||||+|||+..+ ..+||+|||+|+.
T Consensus 252 YmVlE~v~GGeLfd~vv--~nk~l~ed~~K~~f~Qll~avkYLH~~-GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~ 328 (475)
T KOG0615|consen 252 YMVLEYVEGGELFDKVV--ANKYLREDLGKLLFKQLLTAVKYLHSQ-GIIHRDIKPENILLSNDAEDCLLKITDFGLAKV 328 (475)
T ss_pred EEEEEEecCccHHHHHH--hccccccchhHHHHHHHHHHHHHHHHc-CcccccCCcceEEeccCCcceEEEecccchhhc
Confidence 99999999999999997 566788889999999999999999999 99999999999999866 7799999999998
Q ss_pred cCCC---CcccCCCCCCCcccccCCC---CCCCCceeehHHHHHHHhhCCCCCCchhhHH-hhhccccccccccccCCCC
Q 011519 206 SRDG---RSYSTNLAFTPPEYLRTGR---VTPESVMYSFGTLLLDLLSGKHIPPSHALDL-IRDRNIQTLTDSCLEGQFS 278 (484)
Q Consensus 206 ~~~~---~~~~~t~~y~aPE~~~~~~---~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 278 (484)
.... .+.+|||.|.|||++.+.. +..+.|+||+||+||-+++|.+||..+..+. ..++....-... .+...
T Consensus 329 ~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f--~p~~w 406 (475)
T KOG0615|consen 329 SGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAF--GPLQW 406 (475)
T ss_pred cccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccc--cChhh
Confidence 8654 5789999999999998765 3347899999999999999999987664333 222222111110 11223
Q ss_pred hHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHh
Q 011519 279 SDEGTELVRLASRCLQYEPRERPNPRSLVTALVT 312 (484)
Q Consensus 279 ~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~ 312 (484)
...+++..+||.+||..||++|||+.|+++|-|-
T Consensus 407 ~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~ 440 (475)
T KOG0615|consen 407 DRISEEALDLINWMLVVDPENRPSADEALNHPWF 440 (475)
T ss_pred hhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhh
Confidence 5678999999999999999999999999999653
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-51 Score=381.58 Aligned_cols=248 Identities=19% Similarity=0.263 Sum_probs=209.9
Q ss_pred CCcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCC--CccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEE
Q 011519 56 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 132 (484)
..+|.+.++||+|+||+||+|+ ..++..||||.+.... ....+.+..|+.+|+.++|||||.+++++..++.+||||
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM 88 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM 88 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence 4677888889999999999999 4568999999997763 234666889999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCC------CCceeeccCCcccc
Q 011519 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD------VNPRLSCFGLMKNS 206 (484)
Q Consensus 133 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~------~~~kl~DfG~a~~~ 206 (484)
|||.||+|.+||+ ..+.+++..+..++.||+.||++||++ +||||||||.||||+.. -.+||+|||+|+..
T Consensus 89 EyC~gGDLs~yi~--~~~~l~e~t~r~Fm~QLA~alq~L~~~-~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L 165 (429)
T KOG0595|consen 89 EYCNGGDLSDYIR--RRGRLPEATARHFMQQLASALQFLHEN-NIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFL 165 (429)
T ss_pred EeCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeccCCcceEEeccCCCCCCCceEEecccchhhhC
Confidence 9999999999997 455799999999999999999999999 99999999999999754 45899999999998
Q ss_pred CCC---CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHH
Q 011519 207 RDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283 (484)
Q Consensus 207 ~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (484)
..+ .+.+|++-|||||+++.+.|+.|+|+||+|++||++++|+.||............-. .......++...+.
T Consensus 166 ~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k---~~~~~~~~~~~~s~ 242 (429)
T KOG0595|consen 166 QPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKK---GNEIVPVLPAELSN 242 (429)
T ss_pred CchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhc---cccccCchhhhccC
Confidence 875 468999999999999999999999999999999999999999886654443321110 11111223444556
Q ss_pred HHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 284 ELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 284 ~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
.+.+|+...++.+|.+|.+..+-..+
T Consensus 243 ~~~~Ll~~ll~~~~~~~~~~~~~~~~ 268 (429)
T KOG0595|consen 243 PLRELLISLLQRNPKDRISFEDFFDH 268 (429)
T ss_pred chhhhhhHHHhcCccccCchHHhhhh
Confidence 67789999999999999888777665
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-51 Score=398.88 Aligned_cols=246 Identities=17% Similarity=0.217 Sum_probs=217.1
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCc---cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 132 (484)
..|...+.||+|||++||.++. .+|..||+|++.+.... ..+...+||++.++|+|||||+++++|.+.+++|||+
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 4677777889999999999995 88999999999764332 3567899999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC----
Q 011519 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD---- 208 (484)
Q Consensus 133 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~---- 208 (484)
|+|+.|+|..+++ +.+++++.+++.+++||+.||.|||+. +|||||||..|++++++.+|||+|||||.....
T Consensus 98 ELC~~~sL~el~K--rrk~ltEpEary~l~QIv~GlkYLH~~-~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Er 174 (592)
T KOG0575|consen 98 ELCHRGSLMELLK--RRKPLTEPEARYFLRQIVEGLKYLHSL-GIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGER 174 (592)
T ss_pred EecCCccHHHHHH--hcCCCCcHHHHHHHHHHHHHHHHHHhc-CceecccchhheeecCcCcEEecccceeeeecCcccc
Confidence 9999999999997 667899999999999999999999999 999999999999999999999999999988763
Q ss_pred CCcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHH
Q 011519 209 GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288 (484)
Q Consensus 209 ~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 288 (484)
..+.+|||.|+|||++.....+..+||||+|||+|-|++|++||............... ...+|...+.+..+|
T Consensus 175 k~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~------~Y~~P~~ls~~A~dL 248 (592)
T KOG0575|consen 175 KKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLN------EYSMPSHLSAEAKDL 248 (592)
T ss_pred cceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhc------CcccccccCHHHHHH
Confidence 35789999999999999888999999999999999999999998876544443322211 123566778999999
Q ss_pred HHHHhccCCCCCCChHHHHHHHH
Q 011519 289 ASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 289 i~~cl~~dp~~Rps~~~il~~l~ 311 (484)
|.++|+.||.+|||+++|+.|-.
T Consensus 249 I~~lL~~~P~~Rpsl~~vL~h~F 271 (592)
T KOG0575|consen 249 IRKLLRPNPSERPSLDEVLDHPF 271 (592)
T ss_pred HHHHhcCCcccCCCHHHHhcCHh
Confidence 99999999999999999998843
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-52 Score=366.88 Aligned_cols=251 Identities=19% Similarity=0.245 Sum_probs=211.1
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCc--cHHHHHHHHHHHhcCCCCceeeeee-eeeeCCc-eEEE
Q 011519 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLG-CCCEGDE-RLLV 131 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~-~~~~~~~-~~lv 131 (484)
.+|.|+++||+|+||+||++. ..+|..||.|.++-.... ..++...|+.+|++|+|||||++++ .|.+... ++||
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv 98 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV 98 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence 467888999999999999999 789999999999854332 2456899999999999999999999 4555555 8999
Q ss_pred EecCCCCCHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhcC-CC--cccccccccceeecCCCCceeeccCCcccc
Q 011519 132 AEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSK-ER--ALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 206 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~lH~~-~~--ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~ 206 (484)
||||.+|+|...|++. .++.+++..+|+++.|++.||..+|++ .+ |+||||||.||+|+.+|.|||+|||+++.+
T Consensus 99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l 178 (375)
T KOG0591|consen 99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFL 178 (375)
T ss_pred HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHh
Confidence 9999999999999743 456799999999999999999999993 14 899999999999999999999999999988
Q ss_pred CCC----CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCC-hHH
Q 011519 207 RDG----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFS-SDE 281 (484)
Q Consensus 207 ~~~----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 281 (484)
... .+.+|||.||+||.+.+..|+++|||||+||++|||+.-++||.+.....+....-+.- .+..| ...
T Consensus 179 ~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd-----~~~~p~~~Y 253 (375)
T KOG0591|consen 179 SSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGD-----YPPLPDEHY 253 (375)
T ss_pred cchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCC-----CCCCcHHHh
Confidence 775 46789999999999999999999999999999999999999998874443332222221 11234 567
Q ss_pred HHHHHHHHHHHhccCCCCCCChHHHHHHHHh
Q 011519 282 GTELVRLASRCLQYEPRERPNPRSLVTALVT 312 (484)
Q Consensus 282 ~~~l~~li~~cl~~dp~~Rps~~~il~~l~~ 312 (484)
+.++..||..|+..||..||+...++..+..
T Consensus 254 S~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 254 STDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred hhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 8999999999999999999996656555543
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-49 Score=366.90 Aligned_cols=247 Identities=20% Similarity=0.246 Sum_probs=211.7
Q ss_pred CCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCc---cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEE
Q 011519 55 GFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (484)
Q Consensus 55 ~f~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 130 (484)
+.+++++++.||+|+||+||.++ .++++.+|+|++++.... ..+....|..+|.+++||.||+++..|++.+.+||
T Consensus 23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLyl 102 (357)
T KOG0598|consen 23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYL 102 (357)
T ss_pred ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEE
Confidence 34566788888999999999999 567999999999875433 35678899999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC--
Q 011519 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-- 208 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~-- 208 (484)
|+||+.||.|..+|. +.+.+++..+.-++.+|+.||.|||++ |||||||||+|||+|.+|.++|+|||+++....
T Consensus 103 Vld~~~GGeLf~hL~--~eg~F~E~~arfYlaEi~lAL~~LH~~-gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~ 179 (357)
T KOG0598|consen 103 VLDYLNGGELFYHLQ--REGRFSEDRARFYLAEIVLALGYLHSK-GIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDG 179 (357)
T ss_pred EEeccCCccHHHHHH--hcCCcchhHHHHHHHHHHHHHHHHHhC-CeeeccCCHHHeeecCCCcEEEeccccchhcccCC
Confidence 999999999999997 567799999999999999999999999 999999999999999999999999999985432
Q ss_pred --CCcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHH
Q 011519 209 --GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 286 (484)
Q Consensus 209 --~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 286 (484)
..+.+||+.|||||++.+..++..+|.||||+++|||++|.+||.........+.....- ....+.-.+.+.+
T Consensus 180 ~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k-----~~~~p~~ls~~ar 254 (357)
T KOG0598|consen 180 DATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGK-----LPLPPGYLSEEAR 254 (357)
T ss_pred CccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCc-----CCCCCccCCHHHH
Confidence 356799999999999999999999999999999999999999998775444433333221 1123344678999
Q ss_pred HHHHHHhccCCCCCC----ChHHHHHH
Q 011519 287 RLASRCLQYEPRERP----NPRSLVTA 309 (484)
Q Consensus 287 ~li~~cl~~dp~~Rp----s~~~il~~ 309 (484)
+++..+|..||.+|. ++.+|.+|
T Consensus 255 dll~~LL~rdp~~RLg~~~d~~~ik~H 281 (357)
T KOG0598|consen 255 DLLKKLLKRDPRQRLGGPGDAEEIKRH 281 (357)
T ss_pred HHHHHHhccCHHHhcCCCCChHHhhcC
Confidence 999999999999995 56665555
|
|
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-49 Score=381.77 Aligned_cols=251 Identities=27% Similarity=0.404 Sum_probs=214.6
Q ss_pred ccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCCCC
Q 011519 59 ENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 138 (484)
Q Consensus 59 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~~g 138 (484)
..++++||+|-||.||+|.+.....||+|.++.... ..+.|.+|+++|++|+|+|||+++++|..++.++||||||+.|
T Consensus 208 l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m-~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~G 286 (468)
T KOG0197|consen 208 LKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSM-SPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKG 286 (468)
T ss_pred HHHHHHhcCCccceEEEEEEcCCCcccceEEecccc-ChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccC
Confidence 456789999999999999998888999999987643 3468999999999999999999999999988999999999999
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCCcc-----c
Q 011519 139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY-----S 213 (484)
Q Consensus 139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~-----~ 213 (484)
+|.++|+...+..+...+.+.++.||++||+||+++ ++|||||-..||||++++.+||+|||+++...+.... .
T Consensus 287 sLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~-~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~~k 365 (468)
T KOG0197|consen 287 SLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESK-NYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEGGK 365 (468)
T ss_pred cHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhC-CccchhhhhhheeeccCceEEEcccccccccCCCceeecCCCC
Confidence 999999876677899999999999999999999999 9999999999999999999999999999965543211 1
Q ss_pred CCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCC-CCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHH
Q 011519 214 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGK-HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRC 292 (484)
Q Consensus 214 ~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 292 (484)
-.+.|+|||.+..+.++.+||||||||+||||+|-. .|+++..... ..+.+....+-..|..+|+.+.+++..|
T Consensus 366 fPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~e-----v~~~le~GyRlp~P~~CP~~vY~lM~~C 440 (468)
T KOG0197|consen 366 FPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEE-----VLELLERGYRLPRPEGCPDEVYELMKSC 440 (468)
T ss_pred CCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHH-----HHHHHhccCcCCCCCCCCHHHHHHHHHH
Confidence 235799999999999999999999999999999954 4445433222 2222333334445778899999999999
Q ss_pred hccCCCCCCChHHHHHHHHhhhcC
Q 011519 293 LQYEPRERPNPRSLVTALVTLQKD 316 (484)
Q Consensus 293 l~~dp~~Rps~~~il~~l~~~~~~ 316 (484)
|..+|++|||++.+...|+.+...
T Consensus 441 W~~~P~~RPtF~~L~~~l~~~~~~ 464 (468)
T KOG0197|consen 441 WHEDPEDRPTFETLREVLEDFFTS 464 (468)
T ss_pred hhCCcccCCCHHHHHHHHHHhhhc
Confidence 999999999999999998887654
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-49 Score=353.25 Aligned_cols=249 Identities=20% Similarity=0.325 Sum_probs=203.6
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCcc--HHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEe
Q 011519 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 133 (484)
..|+.++++|+|+||+||+++ .++|+.||||++..+.... .+-.++|+++|++++|||+|.++.+|.....+++|+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 357889999999999999999 5679999999997665322 3457899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC-C---
Q 011519 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-G--- 209 (484)
Q Consensus 134 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~-~--- 209 (484)
||+. ++.+-|.+.. ..++...+.+++.|++.|+.|+|++ ++|||||||+||||+.+|.+||||||+|+.... +
T Consensus 82 ~~dh-TvL~eLe~~p-~G~~~~~vk~~l~Q~l~ai~~cHk~-n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~Y 158 (396)
T KOG0593|consen 82 YCDH-TVLHELERYP-NGVPSELVKKYLYQLLKAIHFCHKN-NCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNY 158 (396)
T ss_pred ecch-HHHHHHHhcc-CCCCHHHHHHHHHHHHHHhhhhhhc-CeecccCChhheEEecCCcEEeccchhhHhhcCCcchh
Confidence 9987 6666665533 4589999999999999999999999 999999999999999999999999999998763 3
Q ss_pred CcccCCCCCCCcccccC-CCCCCCCceeehHHHHHHHhhCCCCCCchhh-H-Hh------------------hhcccccc
Q 011519 210 RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHAL-D-LI------------------RDRNIQTL 268 (484)
Q Consensus 210 ~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~-~-~~------------------~~~~~~~~ 268 (484)
+.++.|.+|.|||.+.| ..|....|||++||++.||++|.+.||+... + .. .+..+..+
T Consensus 159 TDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv 238 (396)
T KOG0593|consen 159 TDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGV 238 (396)
T ss_pred hhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeee
Confidence 45677999999999998 5699999999999999999999988876421 1 00 01111111
Q ss_pred ccccc------cCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 269 TDSCL------EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 269 ~~~~~------~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
.-+.. ...+ +..+.-+.+|+..||+.||++|+|.++++.|
T Consensus 239 ~lP~~~~~epLe~k~-p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H 284 (396)
T KOG0593|consen 239 RLPEPEHPEPLERKY-PKISNVLLDLLKKCLKMDPDDRLSCEQLLHH 284 (396)
T ss_pred ecCCCCCccchhhhc-ccchHHHHHHHHHHhcCCccccccHHHHhcC
Confidence 11111 1111 2345688999999999999999999999987
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-48 Score=365.57 Aligned_cols=253 Identities=20% Similarity=0.279 Sum_probs=206.6
Q ss_pred ccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCC--ceEEEEecC
Q 011519 59 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD--ERLLVAEYM 135 (484)
Q Consensus 59 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~--~~~lv~Ey~ 135 (484)
+...+.||+|+||+||++. .++|...|||.+........+.+.+|+.+|.+++|||||+++|...... .++|.|||+
T Consensus 19 ~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~ 98 (313)
T KOG0198|consen 19 WSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYA 98 (313)
T ss_pred hhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeecc
Confidence 4455677999999999999 4569999999997664333667899999999999999999999855544 689999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecC-CCCceeeccCCccccCC------
Q 011519 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-DVNPRLSCFGLMKNSRD------ 208 (484)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~-~~~~kl~DfG~a~~~~~------ 208 (484)
++|||.+++.+..+ .+++..+..+..||++||.|||++ |+|||||||+|||++. ++.+||+|||+++....
T Consensus 99 ~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~-g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~ 176 (313)
T KOG0198|consen 99 PGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSK-GIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKSD 176 (313)
T ss_pred CCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhC-CEeccCcccceEEEeCCCCeEEeccCcccccccccccccc
Confidence 99999999986544 799999999999999999999998 9999999999999999 79999999999886652
Q ss_pred -CCcccCCCCCCCcccccCCC-CCCCCceeehHHHHHHHhhCCCCCCch-hhHHhhhccccccccccccCCCChHHHHHH
Q 011519 209 -GRSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSH-ALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 285 (484)
Q Consensus 209 -~~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~tg~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 285 (484)
.....||+.|||||++.++. ..+++|||||||+++||+||+.|+... ..... .+...... ..+.+|...+.+.
T Consensus 177 ~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~---~~~ig~~~-~~P~ip~~ls~~a 252 (313)
T KOG0198|consen 177 SELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEA---LLLIGRED-SLPEIPDSLSDEA 252 (313)
T ss_pred ccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHH---HHHHhccC-CCCCCCcccCHHH
Confidence 23578999999999999643 446999999999999999998765531 00000 01111111 1225677788999
Q ss_pred HHHHHHHhccCCCCCCChHHHHHHHHhhhcCC
Q 011519 286 VRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (484)
Q Consensus 286 ~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 317 (484)
.+|+..|+..||+.|||+.++++|........
T Consensus 253 ~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~~ 284 (313)
T KOG0198|consen 253 KDFLRKCFKRDPEKRPTAEELLEHPFLKQNSI 284 (313)
T ss_pred HHHHHHHhhcCcccCcCHHHHhhChhhhcccc
Confidence 99999999999999999999999976655443
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-48 Score=364.37 Aligned_cols=250 Identities=18% Similarity=0.265 Sum_probs=208.8
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCccHH-HHHHHHHHHhcCC-CCceeeeeeeeeeCC-ceEEEE
Q 011519 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLR-NRRLANLLGCCCEGD-ERLLVA 132 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~-~~~~E~~~l~~l~-hpniv~l~~~~~~~~-~~~lv~ 132 (484)
.+|.++++||.|+||.||+|+ ..+|..||||.++.......+ .-++|+..|++|. |||||++.+++.+.+ .+++||
T Consensus 10 ~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fVf 89 (538)
T KOG0661|consen 10 DRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVF 89 (538)
T ss_pred HHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeH
Confidence 478999999999999999999 778999999999876544322 3478999999998 999999999999888 899999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC---
Q 011519 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--- 209 (484)
Q Consensus 133 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~--- 209 (484)
|||+. +|.++++++ ++.|++..+..|+.||++||+|+|.+ |+.|||+||+|||+..+..+||+|||+|+.....
T Consensus 90 E~Md~-NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~-GfFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpPY 166 (538)
T KOG0661|consen 90 EFMDC-NLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKH-GFFHRDLKPENILISGNDVIKIADFGLAREVRSKPPY 166 (538)
T ss_pred Hhhhh-hHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhc-CcccccCChhheEecccceeEecccccccccccCCCc
Confidence 99977 899999875 78899999999999999999999998 9999999999999999999999999999987654
Q ss_pred CcccCCCCCCCcccccC-CCCCCCCceeehHHHHHHHhhCCCCCCchhh--HHhhh-----------------------c
Q 011519 210 RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHAL--DLIRD-----------------------R 263 (484)
Q Consensus 210 ~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~--~~~~~-----------------------~ 263 (484)
+.++.|.+|+|||++.. +.|+.+.|||++|||++|+.+-++.|++... +..+- -
T Consensus 167 TeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf 246 (538)
T KOG0661|consen 167 TEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNF 246 (538)
T ss_pred chhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhcc
Confidence 67888999999999864 5699999999999999999999998886411 11110 0
Q ss_pred cccccccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHH
Q 011519 264 NIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 310 (484)
.+.......+..-++ ..+.++.++|.+|+++||++|||+.+++++.
T Consensus 247 ~~P~~~~~~l~~L~p-~~s~~~~~li~~ll~WDP~kRpTA~~al~~p 292 (538)
T KOG0661|consen 247 RFPQVKPSPLKDLLP-NASSEAASLIERLLAWDPDKRPTASQALQHP 292 (538)
T ss_pred CCCcCCCCChHHhCc-ccCHHHHHHHHHHhcCCCccCccHHHHhcCc
Confidence 011111111111122 3678999999999999999999999999984
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-47 Score=365.34 Aligned_cols=245 Identities=20% Similarity=0.238 Sum_probs=211.9
Q ss_pred CCcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCc---cHHHHHHHHHHHhcC-CCCceeeeeeeeeeCCceEE
Q 011519 56 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP---DARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLL 130 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~l 130 (484)
-.++.+.+.||.|+|++|++|+ ..+++.||||++.+.-.. ..+.+..|-.+|.+| .||.|++|+..|++...+|+
T Consensus 72 ~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYF 151 (604)
T KOG0592|consen 72 PNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYF 151 (604)
T ss_pred hhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEE
Confidence 3456677778999999999999 678999999999654322 245577899999999 79999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-
Q 011519 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 209 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~- 209 (484)
|+||+++|+|.++|+ +-+.|++.-...++.||+.||+|||+. |||||||||+|||||.++++||+|||.|+.+...
T Consensus 152 vLe~A~nGdll~~i~--K~Gsfde~caR~YAAeIldAleylH~~-GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~ 228 (604)
T KOG0592|consen 152 VLEYAPNGDLLDLIK--KYGSFDETCARFYAAEILDALEYLHSN-GIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQ 228 (604)
T ss_pred EEEecCCCcHHHHHH--HhCcchHHHHHHHHHHHHHHHHHHHhc-CceeccCChhheeEcCCCcEEEeeccccccCChhh
Confidence 999999999999998 457899999999999999999999999 9999999999999999999999999998865321
Q ss_pred ----------------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccc
Q 011519 210 ----------------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCL 273 (484)
Q Consensus 210 ----------------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 273 (484)
.+++||-.|.+||++..+..++.+|+|+|||+||+|+.|.+||.+...-.+....+. +
T Consensus 229 ~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~------l 302 (604)
T KOG0592|consen 229 KSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQA------L 302 (604)
T ss_pred ccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHH------h
Confidence 347899999999999999999999999999999999999999876543333322222 1
Q ss_pred cCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 274 EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 274 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
.-.+|...++.+.+||.+.|..||.+|+|.++|.+|
T Consensus 303 ~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H 338 (604)
T KOG0592|consen 303 DYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAH 338 (604)
T ss_pred cccCCCCCCHHHHHHHHHHHccCccccccHHHHhhC
Confidence 235677788999999999999999999999999988
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-47 Score=331.64 Aligned_cols=249 Identities=21% Similarity=0.278 Sum_probs=206.7
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCcc--HHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEec
Q 011519 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey 134 (484)
+|..++.+|+|.||.||+|+ ..+|+.||||+++.....+ ....++|++.|+.++|+||+.++++|.+.+.+.||+||
T Consensus 3 rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEf 82 (318)
T KOG0659|consen 3 RYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEF 82 (318)
T ss_pred hhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEe
Confidence 57778889999999999999 6789999999998765443 44688999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCC----
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---- 210 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~---- 210 (484)
++. +|...|++ +...++..++..++.++++||+|||++ .|+||||||.|+|++++|.+||+|||+++......
T Consensus 83 m~t-dLe~vIkd-~~i~l~pa~iK~y~~m~LkGl~y~H~~-~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~ 159 (318)
T KOG0659|consen 83 MPT-DLEVVIKD-KNIILSPADIKSYMLMTLKGLAYCHSK-WILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQT 159 (318)
T ss_pred ccc-cHHHHhcc-cccccCHHHHHHHHHHHHHHHHHHHhh-hhhcccCCccceEEcCCCcEEeecccchhccCCCCcccc
Confidence 977 89999975 566799999999999999999999999 99999999999999999999999999999876532
Q ss_pred cccCCCCCCCcccccCC-CCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhh--------------c---------ccc
Q 011519 211 SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD--------------R---------NIQ 266 (484)
Q Consensus 211 ~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~--------------~---------~~~ 266 (484)
..+.|..|.|||.+.|. .|+...||||.|||+.||+.|.+.|++...-.-.. . .+.
T Consensus 160 ~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~ 239 (318)
T KOG0659|consen 160 HQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQ 239 (318)
T ss_pred cceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHh
Confidence 33578999999999875 49999999999999999999997776542100000 0 011
Q ss_pred ccccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHH
Q 011519 267 TLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 310 (484)
..+.+.... .-+..+.++.+|+..+|..||.+|+|+++++++-
T Consensus 240 ~~P~~~~~~-lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~ 282 (318)
T KOG0659|consen 240 QFPKPPLNN-LFPAASSDALDLLSKMLTYNPKKRITASQALKHP 282 (318)
T ss_pred cCCCCcccc-ccccccHHHHHHHHhhhccCchhcccHHHHhcch
Confidence 111111122 2234567789999999999999999999999883
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-47 Score=340.88 Aligned_cols=245 Identities=17% Similarity=0.205 Sum_probs=212.5
Q ss_pred CCcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCccH---HHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEE
Q 011519 56 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDA---RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~---~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 131 (484)
.+++++++.||.|+||+|.+++ ..+|..+|+|++++...-.. +...+|..+|+.+.||.++++++.|.+.++++||
T Consensus 43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymv 122 (355)
T KOG0616|consen 43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMV 122 (355)
T ss_pred hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEE
Confidence 4567788899999999999999 56789999999987655443 3467899999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-C
Q 011519 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-R 210 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~-~ 210 (484)
|||++||.|.++|+ +.+++++..+..++.||+.||+|||+. +|++|||||+|||+|.+|.+||+|||+|+..... -
T Consensus 123 meyv~GGElFS~Lr--k~~rF~e~~arFYAAeivlAleylH~~-~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~rT~ 199 (355)
T KOG0616|consen 123 MEYVPGGELFSYLR--KSGRFSEPHARFYAAEIVLALEYLHSL-DIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGRTW 199 (355)
T ss_pred EeccCCccHHHHHH--hcCCCCchhHHHHHHHHHHHHHHHHhc-CeeeccCChHHeeeccCCcEEEEeccceEEecCcEE
Confidence 99999999999997 567899999999999999999999999 9999999999999999999999999999987765 4
Q ss_pred cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHH
Q 011519 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (484)
Q Consensus 211 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (484)
+.+|||.|+|||.++...++.++|.|||||++|||+.|.+||..+....+.+..... .-.+|...++++.+|+.
T Consensus 200 TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~------~v~fP~~fs~~~kdLl~ 273 (355)
T KOG0616|consen 200 TLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEG------KVKFPSYFSSDAKDLLK 273 (355)
T ss_pred EecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhC------cccCCcccCHHHHHHHH
Confidence 679999999999999999999999999999999999999998876443332222221 12467888899999999
Q ss_pred HHhccCCCCC-----CChHHHHHH
Q 011519 291 RCLQYEPRER-----PNPRSLVTA 309 (484)
Q Consensus 291 ~cl~~dp~~R-----ps~~~il~~ 309 (484)
.+|+.|-.+| +...+|..|
T Consensus 274 ~LL~vD~t~R~gnlknG~~dIk~H 297 (355)
T KOG0616|consen 274 KLLQVDLTKRFGNLKNGVEDIKNH 297 (355)
T ss_pred HHHhhhhHhhhcCcCCCccccccC
Confidence 9999999999 234455555
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-47 Score=353.83 Aligned_cols=254 Identities=17% Similarity=0.215 Sum_probs=211.2
Q ss_pred CCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCcc-HHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEE
Q 011519 55 GFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD-ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (484)
Q Consensus 55 ~f~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 132 (484)
|-..|++...||.|..++||+|. .+.+..||||++....... ...+.+|+..|+.++||||++++..|..+..+|+||
T Consensus 24 n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVm 103 (516)
T KOG0582|consen 24 NAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVM 103 (516)
T ss_pred CccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEee
Confidence 44688899999999999999999 7788999999998765443 578999999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC---
Q 011519 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--- 209 (484)
Q Consensus 133 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~--- 209 (484)
.||.+||+.++++..-...+++..+..|++++++||.|||.+ |.||||||+.||||+++|.|||+|||.+-.....
T Consensus 104 pfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~-G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R 182 (516)
T KOG0582|consen 104 PFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQN-GHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDR 182 (516)
T ss_pred hhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhc-CceecccccccEEEcCCCcEEEcCceeeeeecccCce
Confidence 999999999999876566699999999999999999999999 9999999999999999999999999975432211
Q ss_pred -----CcccCCCCCCCcccccC--CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccc----cccCCCC
Q 011519 210 -----RSYSTNLAFTPPEYLRT--GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDS----CLEGQFS 278 (484)
Q Consensus 210 -----~~~~~t~~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 278 (484)
....||+.|||||+++. ..|+.|+||||||++.+||.+|..||.........-..++.-+.. .....-.
T Consensus 183 ~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~d~~ 262 (516)
T KOG0582|consen 183 QVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDKDED 262 (516)
T ss_pred eeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCChHHh
Confidence 45689999999999654 349999999999999999999999876443222211222222211 1111222
Q ss_pred hHHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 279 SDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 279 ~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
...+..+.+++..||++||.+|||+++++.+
T Consensus 263 k~~~ksf~e~i~~CL~kDP~kRptAskLlkh 293 (516)
T KOG0582|consen 263 KKFSKSFREMIALCLVKDPSKRPTASKLLKH 293 (516)
T ss_pred hhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence 3456789999999999999999999999987
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-46 Score=366.55 Aligned_cols=249 Identities=19% Similarity=0.206 Sum_probs=212.1
Q ss_pred CCcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCC----CC-ccHHHHHHHHHHHhcCC-CCceeeeeeeeeeCCce
Q 011519 56 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRS----AW-PDARQFLEEARAVGQLR-NRRLANLLGCCCEGDER 128 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~----~~-~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~ 128 (484)
...|.+.+.||+|+||+|+.|+ ..+++.||||++... .. ...+.+.+|+.++++++ ||||++++.++......
T Consensus 16 ~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~ 95 (370)
T KOG0583|consen 16 IGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKI 95 (370)
T ss_pred cCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeE
Confidence 4578888999999999999998 567899999987664 11 22445678999999998 99999999999999999
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCC-CCceeeccCCccccC
Q 011519 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD-VNPRLSCFGLMKNSR 207 (484)
Q Consensus 129 ~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~-~~~kl~DfG~a~~~~ 207 (484)
++||||+.||+|.+++.+ .+++++.++..++.|++.|++|||+. ||+||||||+|||++.+ +++||+|||++....
T Consensus 96 ~ivmEy~~gGdL~~~i~~--~g~l~E~~ar~~F~Qlisav~y~H~~-gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~ 172 (370)
T KOG0583|consen 96 YIVMEYCSGGDLFDYIVN--KGRLKEDEARKYFRQLISAVAYCHSR-GIVHRDLKPENILLDGNEGNLKLSDFGLSAISP 172 (370)
T ss_pred EEEEEecCCccHHHHHHH--cCCCChHHHHHHHHHHHHHHHHHHhC-CEeeCCCCHHHEEecCCCCCEEEeccccccccC
Confidence 999999999999999974 67899999999999999999999999 99999999999999999 999999999999772
Q ss_pred ----CCCcccCCCCCCCcccccCCC-CC-CCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHH
Q 011519 208 ----DGRSYSTNLAFTPPEYLRTGR-VT-PESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 281 (484)
Q Consensus 208 ----~~~~~~~t~~y~aPE~~~~~~-~~-~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (484)
...+.+||+.|+|||++.+.. |+ .++||||+||+||-|++|..||.............. . .-.+|..+
T Consensus 173 ~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~----~--~~~~p~~~ 246 (370)
T KOG0583|consen 173 GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRK----G--EFKIPSYL 246 (370)
T ss_pred CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhc----C--CccCCCCc
Confidence 236789999999999999877 75 699999999999999999999986433322222111 1 11345555
Q ss_pred -HHHHHHHHHHHhccCCCCCCChHHHHHHHHhh
Q 011519 282 -GTELVRLASRCLQYEPRERPNPRSLVTALVTL 313 (484)
Q Consensus 282 -~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~ 313 (484)
++++..|+.+||..||.+|+|+.+|+.+-|-.
T Consensus 247 ~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~ 279 (370)
T KOG0583|consen 247 LSPEARSLIEKMLVPDPSTRITLLEILEHPWFQ 279 (370)
T ss_pred CCHHHHHHHHHHcCCCcccCCCHHHHhhChhhc
Confidence 89999999999999999999999999775543
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-47 Score=366.89 Aligned_cols=247 Identities=18% Similarity=0.265 Sum_probs=212.4
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecC
Q 011519 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~ 135 (484)
..|....++|+|+.|.||.+. ..++..||||.+........+-+++|+.+|+..+|+|||++++.+...+.+|+||||+
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym 352 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYM 352 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeec
Confidence 345666788999999999999 6678899999998877667777899999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC----CCc
Q 011519 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRS 211 (484)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~----~~~ 211 (484)
+||+|.+.+. ...+++.++..|+++++.||+|||.+ ||+|||||.+|||++.+|.+||+|||++..... ..+
T Consensus 353 ~ggsLTDvVt---~~~~~E~qIA~Icre~l~aL~fLH~~-gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~T 428 (550)
T KOG0578|consen 353 EGGSLTDVVT---KTRMTEGQIAAICREILQGLKFLHAR-GIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRST 428 (550)
T ss_pred CCCchhhhhh---cccccHHHHHHHHHHHHHHHHHHHhc-ceeeeccccceeEeccCCcEEEeeeeeeeccccccCcccc
Confidence 9999999994 45599999999999999999999999 999999999999999999999999999877554 356
Q ss_pred ccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHH
Q 011519 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291 (484)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 291 (484)
..|||.|||||++....|+++.||||||++++||+-|.+||..+..-....... ....+.-..+..+++.+.+|+.+
T Consensus 429 mVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa---~ng~P~lk~~~klS~~~kdFL~~ 505 (550)
T KOG0578|consen 429 MVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIA---TNGTPKLKNPEKLSPELKDFLDR 505 (550)
T ss_pred ccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHh---hcCCCCcCCccccCHHHHHHHHH
Confidence 789999999999999999999999999999999999998876431110000000 11111223467788999999999
Q ss_pred HhccCCCCCCChHHHHHHH
Q 011519 292 CLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 292 cl~~dp~~Rps~~~il~~l 310 (484)
||..|+.+|+|+.|+|+|-
T Consensus 506 cL~~dv~~RasA~eLL~Hp 524 (550)
T KOG0578|consen 506 CLVVDVEQRASAKELLEHP 524 (550)
T ss_pred HhhcchhcCCCHHHHhcCh
Confidence 9999999999999999983
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-47 Score=365.55 Aligned_cols=242 Identities=19% Similarity=0.253 Sum_probs=211.9
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCc--cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEec
Q 011519 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey 134 (484)
+|.+.+.+|+|+||+||||+ ..+.+.||+|.+.+.... +.+.+.+|+++++.++|||||.++++|....++|+|+||
T Consensus 3 ~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~ 82 (808)
T KOG0597|consen 3 QYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEY 82 (808)
T ss_pred chhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehh
Confidence 45666777999999999999 567899999999776543 366799999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----C
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----R 210 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~----~ 210 (484)
+.| +|..+|. ..+.++++.+..|+.+++.||.|||+. +|+|||+||.|||++..|++|+||||+|+..... +
T Consensus 83 a~g-~L~~il~--~d~~lpEe~v~~~a~~LVsaL~yLhs~-rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vlt 158 (808)
T KOG0597|consen 83 AVG-DLFTILE--QDGKLPEEQVRAIAYDLVSALYYLHSN-RILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVLT 158 (808)
T ss_pred hhh-hHHHHHH--hccCCCHHHHHHHHHHHHHHHHHHHhc-CcccccCCcceeeecCCCceeechhhhhhhcccCceeee
Confidence 977 9999997 567799999999999999999999999 9999999999999999999999999999987765 3
Q ss_pred cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHH
Q 011519 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (484)
Q Consensus 211 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (484)
+..|||-|||||+..++.|+..+|+||+||++||+++|++||................ ..+|...+..+..|+.
T Consensus 159 sikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~------v~~p~~~S~~f~nfl~ 232 (808)
T KOG0597|consen 159 SIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDP------VKPPSTASSSFVNFLQ 232 (808)
T ss_pred eccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCC------CCCcccccHHHHHHHH
Confidence 5689999999999999999999999999999999999999987654322222222111 1345678899999999
Q ss_pred HHhccCCCCCCChHHHHHH
Q 011519 291 RCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~ 309 (484)
..|.+||..|.|..+++.|
T Consensus 233 gLL~kdP~~RltW~~Ll~H 251 (808)
T KOG0597|consen 233 GLLIKDPAQRLTWTDLLGH 251 (808)
T ss_pred HHhhcChhhcccHHHHhcC
Confidence 9999999999999999988
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-47 Score=358.11 Aligned_cols=249 Identities=21% Similarity=0.253 Sum_probs=202.5
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCc--cHHHHHHHHHHHhcCCCCceeeeeeeeeeC--CceEEE
Q 011519 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEG--DERLLV 131 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~--~~~~lv 131 (484)
+.|+.+++||+|.||.||+|+ ..+|+.||+|++...... ...-..+||.+|++|.||||++|.+...+. +.+|||
T Consensus 117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlV 196 (560)
T KOG0600|consen 117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLV 196 (560)
T ss_pred HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEE
Confidence 347788999999999999999 788999999999766522 344567999999999999999999999877 689999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC--
Q 011519 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 209 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~-- 209 (484)
+|||+. +|..++.. .+-.|++.++..++.|++.||+|||++ ||+|||||.+|||||.+|.+||+|||||+.....
T Consensus 197 FeYMdh-DL~GLl~~-p~vkft~~qIKc~mkQLl~Gl~~cH~~-gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~ 273 (560)
T KOG0600|consen 197 FEYMDH-DLSGLLSS-PGVKFTEPQIKCYMKQLLEGLEYCHSR-GVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGS 273 (560)
T ss_pred Eecccc-hhhhhhcC-CCcccChHHHHHHHHHHHHHHHHHhhc-CeeeccccccceEEcCCCCEEeccccceeeccCCCC
Confidence 999988 89998853 345799999999999999999999999 9999999999999999999999999999975543
Q ss_pred ---CcccCCCCCCCcccccCCC-CCCCCceeehHHHHHHHhhCCCCCCchhhHHhhh-----------cc--ccccc---
Q 011519 210 ---RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD-----------RN--IQTLT--- 269 (484)
Q Consensus 210 ---~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~-----------~~--~~~~~--- 269 (484)
+..+.|.+|.|||.+.|.. |+.+.|+||.||||.||++|++++++...-.-.. .. ...++
T Consensus 274 ~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~ 353 (560)
T KOG0600|consen 274 APYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHAT 353 (560)
T ss_pred cccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCccc
Confidence 3445689999999999864 9999999999999999999998887542111000 00 00111
Q ss_pred --ccc------ccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 270 --DSC------LEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 270 --~~~------~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
.+. +... -...+....+|+..+|..||.+|.|+.+++..
T Consensus 354 ~~kp~~~y~r~l~E~-~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~s 400 (560)
T KOG0600|consen 354 IFKPQQPYKRRLRET-FKDFPASALDLLEKLLSLDPDKRGTASSALQS 400 (560)
T ss_pred ccCCCCcccchHHHH-hccCCHHHHHHHHHHhccCccccccHHHHhcC
Confidence 000 0000 12346778999999999999999999998876
|
|
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-46 Score=358.25 Aligned_cols=332 Identities=18% Similarity=0.264 Sum_probs=248.3
Q ss_pred cccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCCCCCHH
Q 011519 62 VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLA 141 (484)
Q Consensus 62 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~~gsL~ 141 (484)
++-||.|+.|.||+|++.+ +.||||+++... ..+|+-|++|+||||+.+.|+|....-++||||||..|-|.
T Consensus 129 LeWlGSGaQGAVF~Grl~n-etVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~ 200 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGRLHN-ETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLY 200 (904)
T ss_pred hhhhccCcccceeeeeccC-ceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHH
Confidence 3457999999999999854 579999986432 35678899999999999999999999999999999999999
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC---CcccCCCCC
Q 011519 142 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---RSYSTNLAF 218 (484)
Q Consensus 142 ~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~---~~~~~t~~y 218 (484)
.+|+ .+++++......|..+||.|+.|||.. .|||||||.-||||+.+..|||+|||.++..... .+++||..|
T Consensus 201 ~VLk--a~~~itp~llv~Wsk~IA~GM~YLH~h-KIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STkMSFaGTVaW 277 (904)
T KOG4721|consen 201 EVLK--AGRPITPSLLVDWSKGIAGGMNYLHLH-KIIHRDLKSPNILISYDDVVKISDFGTSKELSDKSTKMSFAGTVAW 277 (904)
T ss_pred HHHh--ccCccCHHHHHHHHHHhhhhhHHHHHh-hHhhhccCCCceEeeccceEEeccccchHhhhhhhhhhhhhhhHhh
Confidence 9997 567899999999999999999999998 9999999999999999999999999998876543 468999999
Q ss_pred CCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHHhccCCC
Q 011519 219 TPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPR 298 (484)
Q Consensus 219 ~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 298 (484)
||||++...+.+.|.||||||||||||+||..|+..-. ....+..+-...+.-..|..++..+.-|++.||+..|.
T Consensus 278 MAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVd----ssAIIwGVGsNsL~LpvPstcP~GfklL~Kqcw~sKpR 353 (904)
T KOG4721|consen 278 MAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVD----SSAIIWGVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPR 353 (904)
T ss_pred hCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccc----hheeEEeccCCcccccCcccCchHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999999998865322 12233333344445556788889999999999999999
Q ss_pred CCCChHHHHHHHHhhhcCCCCCcccccCCCCCCCCCCCCCCCCcccccchhHHHHHHHHh-CCcCchhhHhhhhhhhHHH
Q 011519 299 ERPNPRSLVTALVTLQKDTEVPSHVLMGIPHGAAALPLSPLGDACLRMDLTAIHEILEKL-GYKDDEGAATEMWTGQMQE 377 (484)
Q Consensus 299 ~Rps~~~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~e~l~~~-~y~~~~~~a~e~~~~~~~~ 377 (484)
.|||+++|+.||+-...+.-. +...++++.. .|++..+.-.+..+.....
T Consensus 354 NRPSFrqil~HldIa~pell~-----------------------------~tee~yf~sq~swrEevk~h~~~it~~gt~ 404 (904)
T KOG4721|consen 354 NRPSFRQILLHLDIASPELLS-----------------------------TTEETYFKSQASWREEVKLHFEKITSEGTC 404 (904)
T ss_pred CCccHHHHHHHHhhcCHHHhc-----------------------------ccHHHHHHHHHHHHHHHHHhhhhhccCcch
Confidence 999999999999754332100 0111122211 1322221111111111111
Q ss_pred hhhhhHhHHHHHhccCH---HHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc
Q 011519 378 TLNSKKKGDVAFRHKDF---RASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVI 442 (484)
Q Consensus 378 a~~~~~~g~~~~~~~~~---~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 442 (484)
+..+.+. .+-.+..++ .+-.+.|+.-|+...+ +|..+..|+.++..-+.-+.--+++++.
T Consensus 405 ih~~eee-lirrR~eelrHa~DIR~~YE~KLertN~----ly~eLs~cm~qLelkEkElaerEq~l~r 467 (904)
T KOG4721|consen 405 IHRLEEE-LIRRRREELRHALDIREHYERKLERTNN----LYMELSACMLQLELKEKELAEREQALER 467 (904)
T ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1111110 011111222 2334567777776555 8999999999998888888888888864
|
|
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-45 Score=359.53 Aligned_cols=247 Identities=18% Similarity=0.240 Sum_probs=215.5
Q ss_pred CCcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCC-C--ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEE
Q 011519 56 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA-W--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 131 (484)
...+++.+.||.|+.|.|-+|+ ..+|+.+|||++.... . .....+.+|+-+|+.+.||||++++++|.+..++|+|
T Consensus 11 iGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylv 90 (786)
T KOG0588|consen 11 IGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLV 90 (786)
T ss_pred ccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEE
Confidence 3466778889999999999999 6789999999997542 1 1234578999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC--
Q 011519 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 209 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~-- 209 (484)
.||++||.|++++. .++++++.++.+++.||+.|+.|+|.. +|+|||+||+|+|+|..+++||+|||+|.....+
T Consensus 91 lEyv~gGELFdylv--~kG~l~e~eaa~ff~QIi~gv~yCH~~-~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gkl 167 (786)
T KOG0588|consen 91 LEYVPGGELFDYLV--RKGPLPEREAAHFFRQILDGVSYCHAF-NICHRDLKPENLLLDVKNNIKIADFGMASLEVPGKL 167 (786)
T ss_pred EEecCCchhHHHHH--hhCCCCCHHHHHHHHHHHHHHHHHhhh-cceeccCCchhhhhhcccCEeeeccceeecccCCcc
Confidence 99999999999997 678899999999999999999999998 9999999999999999999999999999886665
Q ss_pred -CcccCCCCCCCcccccCCCC-CCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccC--CCChHHHHHH
Q 011519 210 -RSYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEG--QFSSDEGTEL 285 (484)
Q Consensus 210 -~~~~~t~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l 285 (484)
.+.+|+|.|.+||+++|.+| ..++||||.|||||.|+||+.||.++.... +......+ ..|..++.++
T Consensus 168 LeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~--------LLlKV~~G~f~MPs~Is~ea 239 (786)
T KOG0588|consen 168 LETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRV--------LLLKVQRGVFEMPSNISSEA 239 (786)
T ss_pred ccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHH--------HHHHHHcCcccCCCcCCHHH
Confidence 57899999999999999998 569999999999999999999998553332 22222222 2467778999
Q ss_pred HHHHHHHhccCCCCCCChHHHHHHHHhh
Q 011519 286 VRLASRCLQYEPRERPNPRSLVTALVTL 313 (484)
Q Consensus 286 ~~li~~cl~~dp~~Rps~~~il~~l~~~ 313 (484)
++|+.+||..||..|.|+++|+.|.+-.
T Consensus 240 QdLLr~ml~VDp~~RiT~~eI~kHP~l~ 267 (786)
T KOG0588|consen 240 QDLLRRMLDVDPSTRITTEEILKHPFLS 267 (786)
T ss_pred HHHHHHHhccCccccccHHHHhhCchhh
Confidence 9999999999999999999999996643
|
|
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-47 Score=353.35 Aligned_cols=244 Identities=15% Similarity=0.256 Sum_probs=209.4
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCcc-HHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecC
Q 011519 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD-ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~ 135 (484)
.|..+..||+|+||.||+|. ..+++.||+|++......+ .+++.+|+.+|..++++||.++++.+..+..+|++||||
T Consensus 14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~ 93 (467)
T KOG0201|consen 14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYC 93 (467)
T ss_pred ccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHh
Confidence 34555778999999999999 6789999999998765444 678899999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----Cc
Q 011519 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RS 211 (484)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~----~~ 211 (484)
.||++.+.|. .+..+++..+.-++++++.||.|||.. +.+|||||+.|||+..+|.+||+|||.+...... .+
T Consensus 94 ~gGsv~~lL~--~~~~~~E~~i~~ilre~l~~l~ylH~~-~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~t 170 (467)
T KOG0201|consen 94 GGGSVLDLLK--SGNILDEFEIAVILREVLKGLDYLHSE-KKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRKT 170 (467)
T ss_pred cCcchhhhhc--cCCCCccceeeeehHHHHHHhhhhhhc-ceecccccccceeEeccCcEEEEecceeeeeechhhcccc
Confidence 9999999996 455568999999999999999999999 9999999999999999999999999998765442 57
Q ss_pred ccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHH
Q 011519 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291 (484)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 291 (484)
+.||+.|||||++.+..|+.++||||||++.+||.+|.+|+..... .....++....++.....+++.+++|+..
T Consensus 171 fvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hP-----mrvlflIpk~~PP~L~~~~S~~~kEFV~~ 245 (467)
T KOG0201|consen 171 FVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHP-----MRVLFLIPKSAPPRLDGDFSPPFKEFVEA 245 (467)
T ss_pred ccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCc-----ceEEEeccCCCCCccccccCHHHHHHHHH
Confidence 8999999999999988899999999999999999999977543221 12222233333333444677889999999
Q ss_pred HhccCCCCCCChHHHHHH
Q 011519 292 CLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 292 cl~~dp~~Rps~~~il~~ 309 (484)
||.+||+.|||+.+++.|
T Consensus 246 CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 246 CLDKNPEFRPSAKELLKH 263 (467)
T ss_pred HhhcCcccCcCHHHHhhh
Confidence 999999999999999987
|
|
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-45 Score=334.06 Aligned_cols=258 Identities=17% Similarity=0.203 Sum_probs=209.7
Q ss_pred HHhcCCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCcc--HHHHHHHHHHHhcCCCCceeeeeeeeee--C
Q 011519 51 TATSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLGCCCE--G 125 (484)
Q Consensus 51 ~~~~~f~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~hpniv~l~~~~~~--~ 125 (484)
...++.++|+++.+|++|+||.||+|+ .++++.||+|+++...... .-.-++||.+|.+++|||||.+-.+... -
T Consensus 70 ~gCrsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~ 149 (419)
T KOG0663|consen 70 GGCRSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNM 149 (419)
T ss_pred cCcccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEecccc
Confidence 345566788899999999999999999 6789999999998654222 2246899999999999999999988754 3
Q ss_pred CceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccc
Q 011519 126 DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN 205 (484)
Q Consensus 126 ~~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 205 (484)
+.+|||||||+. +|.+++.. .+.+|...++..++.|+++||+|||.. .|+||||||+|+|+++.|.+||+|||+|+.
T Consensus 150 d~iy~VMe~~Eh-DLksl~d~-m~q~F~~~evK~L~~QlL~glk~lH~~-wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ 226 (419)
T KOG0663|consen 150 DKIYIVMEYVEH-DLKSLMET-MKQPFLPGEVKTLMLQLLRGLKHLHDN-WILHRDLKTSNLLLSHKGILKIADFGLARE 226 (419)
T ss_pred ceeeeeHHHHHh-hHHHHHHh-ccCCCchHHHHHHHHHHHHHHHHHhhc-eeEecccchhheeeccCCcEEecccchhhh
Confidence 579999999977 89999964 457899999999999999999999999 999999999999999999999999999998
Q ss_pred cCCC----CcccCCCCCCCcccccCCC-CCCCCceeehHHHHHHHhhCCCCCCchhhHHhhh------------------
Q 011519 206 SRDG----RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD------------------ 262 (484)
Q Consensus 206 ~~~~----~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~------------------ 262 (484)
.+.. +..+.|.+|.|||.+.+.. |+...|+||+|||+.||+++++.|++...-....
T Consensus 227 ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~ 306 (419)
T KOG0663|consen 227 YGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYS 306 (419)
T ss_pred hcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCcc
Confidence 7664 4456789999999999755 9999999999999999999998887642111100
Q ss_pred -------ccccccccccccCCCChH-HHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 263 -------RNIQTLTDSCLEGQFSSD-EGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 263 -------~~~~~~~~~~~~~~~~~~-~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
..+...+...++..|+.. .++.-.+|+..+|.+||.+|.|+.+.++|=+
T Consensus 307 ~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~ 363 (419)
T KOG0663|consen 307 ELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEY 363 (419)
T ss_pred ccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccc
Confidence 011111111222333333 5688899999999999999999999999843
|
|
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-45 Score=353.23 Aligned_cols=249 Identities=16% Similarity=0.157 Sum_probs=207.6
Q ss_pred CCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCc---cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEE
Q 011519 55 GFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (484)
Q Consensus 55 ~f~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 130 (484)
..++++++..||+|+||.||+|+ ..+|..+|+|+++++..- ..+.+..|-.+|....+|+||+|+-.|++.+.+||
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 45677889999999999999999 667999999999876543 25567889999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccC---
Q 011519 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR--- 207 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~--- 207 (484)
||||++||++..+|. +.+.|++..+..++.+++.||..||+. |+|||||||+|+|||..|++||+||||+....
T Consensus 219 iMEylPGGD~mTLL~--~~~~L~e~~arfYiaE~vlAI~~iH~~-gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~ 295 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLM--RKDTLTEDWARFYIAETVLAIESIHQL-GYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKH 295 (550)
T ss_pred EEEecCCccHHHHHH--hcCcCchHHHHHHHHHHHHHHHHHHHc-CcccccCChhheeecCCCCEeeccccccchhhhhh
Confidence 999999999999997 567899999999999999999999999 99999999999999999999999999974210
Q ss_pred -----------------------C-----C--------------------CcccCCCCCCCcccccCCCCCCCCceeehH
Q 011519 208 -----------------------D-----G--------------------RSYSTNLAFTPPEYLRTGRVTPESVMYSFG 239 (484)
Q Consensus 208 -----------------------~-----~--------------------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG 239 (484)
. . .+.+|||-|||||++.+..|+..+|.||||
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG 375 (550)
T KOG0605|consen 296 RIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLG 375 (550)
T ss_pred hhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHH
Confidence 0 0 034689999999999999999999999999
Q ss_pred HHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHHhccCCCCCC---ChHHHHHH
Q 011519 240 TLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP---NPRSLVTA 309 (484)
Q Consensus 240 ~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp---s~~~il~~ 309 (484)
||+||||.|.+||.++..+..-..... ... .+........+.++.+||.+||. ||++|. +++||-.|
T Consensus 376 ~ImyEmLvGyPPF~s~tp~~T~rkI~n-wr~-~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~H 445 (550)
T KOG0605|consen 376 CIMYEMLVGYPPFCSETPQETYRKIVN-WRE-TLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKH 445 (550)
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHH-Hhh-hccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcC
Confidence 999999999999987755443322111 110 01111123345899999999999 999995 57777777
|
|
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-45 Score=360.52 Aligned_cols=253 Identities=21% Similarity=0.324 Sum_probs=202.3
Q ss_pred cccccccCCCCCCceEEEEEe------CCCcEEEEEEecCCCCc-cHHHHHHHHHHHhcC-CCCceeeeeeeeeeC-Cce
Q 011519 58 MENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQL-RNRRLANLLGCCCEG-DER 128 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~-~~~ 128 (484)
+|++.+.||+|+||.||+|.. .+++.||||+++..... ..+.+.+|+.++..+ +||||+++++++... +..
T Consensus 8 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 87 (338)
T cd05102 8 RLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGPL 87 (338)
T ss_pred HceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCce
Confidence 567888899999999999973 23568999999754322 345789999999999 899999999988764 458
Q ss_pred EEEEecCCCCCHHhhhccCC------------------------------------------------------------
Q 011519 129 LLVAEYMPNDTLAKHLFHWE------------------------------------------------------------ 148 (484)
Q Consensus 129 ~lv~Ey~~~gsL~~~l~~~~------------------------------------------------------------ 148 (484)
++||||+++|+|.+++....
T Consensus 88 ~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (338)
T cd05102 88 MVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLW 167 (338)
T ss_pred EEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccccc
Confidence 99999999999999986421
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC------CcccCCCCCCCcc
Q 011519 149 TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG------RSYSTNLAFTPPE 222 (484)
Q Consensus 149 ~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~------~~~~~t~~y~aPE 222 (484)
..++++..+..++.||+.||.|||+. ||+||||||+|||++.++.+||+|||+++..... ....+++.|+|||
T Consensus 168 ~~~l~~~~~~~~~~qi~~aL~~LH~~-~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE 246 (338)
T cd05102 168 KSPLTMEDLICYSFQVARGMEFLASR-KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPE 246 (338)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHC-CEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCcH
Confidence 13478889999999999999999998 9999999999999999999999999999764322 1234467899999
Q ss_pred cccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHHhccCCCCCC
Q 011519 223 YLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 301 (484)
Q Consensus 223 ~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 301 (484)
++.+..++.++|||||||++|||++ |..||............. . .......+...++.+.+|+.+||+.||.+||
T Consensus 247 ~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~l~~li~~cl~~dp~~RP 322 (338)
T cd05102 247 SIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRL---K-DGTRMRAPENATPEIYRIMLACWQGDPKERP 322 (338)
T ss_pred HhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHH---h-cCCCCCCCCCCCHHHHHHHHHHccCChhhCc
Confidence 9998889999999999999999997 888876532211100000 0 0011123445567899999999999999999
Q ss_pred ChHHHHHHHHhhhc
Q 011519 302 NPRSLVTALVTLQK 315 (484)
Q Consensus 302 s~~~il~~l~~~~~ 315 (484)
|+.++++.|+.+..
T Consensus 323 s~~el~~~l~~~~~ 336 (338)
T cd05102 323 TFSALVEILGDLLQ 336 (338)
T ss_pred CHHHHHHHHHHHHh
Confidence 99999999988754
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-45 Score=346.49 Aligned_cols=252 Identities=17% Similarity=0.174 Sum_probs=208.4
Q ss_pred CCcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCc--------------cHHHHHHHHHHHhcCCCCceeeeee
Q 011519 56 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--------------DARQFLEEARAVGQLRNRRLANLLG 120 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--------------~~~~~~~E~~~l~~l~hpniv~l~~ 120 (484)
...|+++.+||+|.||.|-+|. ..+++.||||++.+.... ..++..+||.+|++++|||||+|+.
T Consensus 96 lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiE 175 (576)
T KOG0585|consen 96 LNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIE 175 (576)
T ss_pred hhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEE
Confidence 4578899999999999999999 567999999999653221 2457899999999999999999999
Q ss_pred eeeeC--CceEEEEecCCCCCHHhhhccCCCCC-CCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCcee
Q 011519 121 CCCEG--DERLLVAEYMPNDTLAKHLFHWETQP-MKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRL 197 (484)
Q Consensus 121 ~~~~~--~~~~lv~Ey~~~gsL~~~l~~~~~~~-l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl 197 (484)
+..+. +.+|||+|||..|.+...= ...+ +++.+++.++.+++.||+|||.+ |||||||||+|+||+++|+|||
T Consensus 176 vLDDP~s~~~YlVley~s~G~v~w~p---~d~~els~~~Ar~ylrDvv~GLEYLH~Q-giiHRDIKPsNLLl~~~g~VKI 251 (576)
T KOG0585|consen 176 VLDDPESDKLYLVLEYCSKGEVKWCP---PDKPELSEQQARKYLRDVVLGLEYLHYQ-GIIHRDIKPSNLLLSSDGTVKI 251 (576)
T ss_pred eecCcccCceEEEEEeccCCccccCC---CCcccccHHHHHHHHHHHHHHHHHHHhc-CeeccccchhheEEcCCCcEEe
Confidence 99875 5799999999988765432 3445 99999999999999999999999 9999999999999999999999
Q ss_pred eccCCccccCCC---------CcccCCCCCCCcccccCCC----CCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcc
Q 011519 198 SCFGLMKNSRDG---------RSYSTNLAFTPPEYLRTGR----VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN 264 (484)
Q Consensus 198 ~DfG~a~~~~~~---------~~~~~t~~y~aPE~~~~~~----~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~ 264 (484)
+|||.+.....+ ....|||.|+|||.+.++. .+.+.||||+||+||.|+.|+.||.++..-.+....
T Consensus 252 sDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KI 331 (576)
T KOG0585|consen 252 SDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDKI 331 (576)
T ss_pred eccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHHH
Confidence 999998765322 2468999999999998743 466889999999999999999999877554443333
Q ss_pred ccccccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhc
Q 011519 265 IQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 315 (484)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~ 315 (484)
.... +.-...++..+.+.+||.++|.+||+.|.+..+|..|.+..+.
T Consensus 332 vn~p----L~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 332 VNDP----LEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD 378 (576)
T ss_pred hcCc----ccCCCcccccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence 3221 1111223567899999999999999999999999999887665
|
|
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-46 Score=341.71 Aligned_cols=246 Identities=17% Similarity=0.251 Sum_probs=214.8
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCccHH---HHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEE
Q 011519 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDAR---QFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~---~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 132 (484)
.+|++.+.||+|.||.|-++. ...|+.||||.|+++...+.. .+.+|+++|+.|+||||++++.+|...+...|||
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivM 132 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVM 132 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEE
Confidence 478899999999999999999 688999999999887665543 4779999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC---
Q 011519 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--- 209 (484)
Q Consensus 133 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~--- 209 (484)
||..+|.|.+|+. ..+.+++.++.++++||..|+.|+|.+ +++|||||.+|||+|.|+++||+|||++......
T Consensus 133 EYaS~GeLYDYiS--er~~LsErEaRhfFRQIvSAVhYCHkn-rVvHRDLKLENILLD~N~NiKIADFGLSNly~~~kfL 209 (668)
T KOG0611|consen 133 EYASGGELYDYIS--ERGSLSEREARHFFRQIVSAVHYCHKN-RVVHRDLKLENILLDQNNNIKIADFGLSNLYADKKFL 209 (668)
T ss_pred EecCCccHHHHHH--HhccccHHHHHHHHHHHHHHHHHHhhc-cceecccchhheeecCCCCeeeeccchhhhhccccHH
Confidence 9999999999997 567899999999999999999999998 9999999999999999999999999999887665
Q ss_pred CcccCCCCCCCcccccCCCC-CCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCC-ChHHHHHHHH
Q 011519 210 RSYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQF-SSDEGTELVR 287 (484)
Q Consensus 210 ~~~~~t~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~ 287 (484)
.+++|++-|.+||.+.|.+| .+..|.|||||+||-|+.|.-||.+........+. .++.+ .+..+.+...
T Consensus 210 qTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQI--------s~GaYrEP~~PSdA~g 281 (668)
T KOG0611|consen 210 QTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQI--------SRGAYREPETPSDASG 281 (668)
T ss_pred HHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHh--------hcccccCCCCCchHHH
Confidence 57899999999999999887 67999999999999999999999875433322211 11111 2233567889
Q ss_pred HHHHHhccCCCCCCChHHHHHHHHhh
Q 011519 288 LASRCLQYEPRERPNPRSLVTALVTL 313 (484)
Q Consensus 288 li~~cl~~dp~~Rps~~~il~~l~~~ 313 (484)
||++||..||++|.|+.+|..|.|--
T Consensus 282 LIRwmLmVNP~RRATieDiAsHWWvN 307 (668)
T KOG0611|consen 282 LIRWMLMVNPERRATIEDIASHWWVN 307 (668)
T ss_pred HHHHHHhcCcccchhHHHHhhhheee
Confidence 99999999999999999999997643
|
|
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-45 Score=352.99 Aligned_cols=247 Identities=19% Similarity=0.200 Sum_probs=219.7
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCcc--HHHHHHHHHHHhcCCCCceeeeeeeeeeCCc-eEEEE
Q 011519 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLGCCCEGDE-RLLVA 132 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~-~~lv~ 132 (484)
+.|.+++.+|+|+||.+++++ ..++..|++|.+....... .+...+|+.++++++|||||.+.+.|.+++. .+|||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 468889999999999999999 4567899999997655433 4468899999999999999999999999888 99999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC---
Q 011519 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--- 209 (484)
Q Consensus 133 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~--- 209 (484)
+||+||+|.+.|...++..+++..+..|+.|++.|+.|||++ +|+|||||+.||+++.++.|||+|||+++.....
T Consensus 84 ~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~-~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~~ 162 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHEN-RVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDSL 162 (426)
T ss_pred eecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhh-hhhcccchhhhhhccccCceeecchhhhhhcCCchhh
Confidence 999999999999876777899999999999999999999988 9999999999999999999999999999987765
Q ss_pred -CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHH
Q 011519 210 -RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288 (484)
Q Consensus 210 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 288 (484)
.+..||+.||+||.+.+.+|..|+|||||||++|||++-+++|.................. ..|...+.++..+
T Consensus 163 a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~-----Plp~~ys~el~~l 237 (426)
T KOG0589|consen 163 ASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYS-----PLPSMYSSELRSL 237 (426)
T ss_pred hheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCC-----CCCccccHHHHHH
Confidence 4678999999999999999999999999999999999999988876555555444444432 3567778999999
Q ss_pred HHHHhccCCCCCCChHHHHHH
Q 011519 289 ASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 289 i~~cl~~dp~~Rps~~~il~~ 309 (484)
|..||+.+|..||++.+++.+
T Consensus 238 v~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 238 VKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred HHHHhhcCCccCCCHHHHhhC
Confidence 999999999999999999987
|
|
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-45 Score=319.76 Aligned_cols=248 Identities=21% Similarity=0.241 Sum_probs=216.4
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCc---cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEe
Q 011519 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 133 (484)
++++.+.||+|-||.||.|+ ..++..||+|++-++... ...++.+|+++-+.|+||||++++++|.+....|+++|
T Consensus 23 dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLilE 102 (281)
T KOG0580|consen 23 DFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLILE 102 (281)
T ss_pred hccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEEE
Confidence 44677888999999999999 677899999998665432 35679999999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC--CCc
Q 011519 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD--GRS 211 (484)
Q Consensus 134 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~--~~~ 211 (484)
|.++|+|...|.......+++...+.++.|++.||.|+|.+ ++|||||||+|+|++..+.+||+|||.+..... ..+
T Consensus 103 ya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k-~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~~kR~t 181 (281)
T KOG0580|consen 103 YAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSNKRKT 181 (281)
T ss_pred ecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccC-CcccCCCCHHHhccCCCCCeeccCCCceeecCCCCcee
Confidence 99999999999876777899999999999999999999999 999999999999999999999999999887643 457
Q ss_pred ccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHH
Q 011519 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291 (484)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 291 (484)
.+||..|.+||+..+...+...|+|++|++.||++.|.+||.....+........ . .-.+|..++..+.++|.+
T Consensus 182 lcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k----~--~~~~p~~is~~a~dlI~~ 255 (281)
T KOG0580|consen 182 LCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRK----V--DLKFPSTISGGAADLISR 255 (281)
T ss_pred eecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHH----c--cccCCcccChhHHHHHHH
Confidence 8999999999999999999999999999999999999999876653333222211 1 123567778999999999
Q ss_pred HhccCCCCCCChHHHHHHHHh
Q 011519 292 CLQYEPRERPNPRSLVTALVT 312 (484)
Q Consensus 292 cl~~dp~~Rps~~~il~~l~~ 312 (484)
|+..+|.+|.+..++++|-+-
T Consensus 256 ll~~~p~~r~~l~~v~~hpwI 276 (281)
T KOG0580|consen 256 LLVKNPIERLALTEVMDHPWI 276 (281)
T ss_pred HhccCccccccHHHHhhhHHH
Confidence 999999999999999999664
|
|
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-44 Score=344.77 Aligned_cols=245 Identities=17% Similarity=0.240 Sum_probs=202.8
Q ss_pred cCCCCCCceEEEEEeCCCcEEEEEEecCCCCcc---HHHHHHHHHHHhcCCCCceeeeeeeeee----CCceEEEEecCC
Q 011519 64 EHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD---ARQFLEEARAVGQLRNRRLANLLGCCCE----GDERLLVAEYMP 136 (484)
Q Consensus 64 ~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~hpniv~l~~~~~~----~~~~~lv~Ey~~ 136 (484)
.+|+|++|.||+|.. +|+.||||.++...... .+.|.+|+.+|.+++||||+++++++.+ ....++||||++
T Consensus 27 ~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~ 105 (283)
T PHA02988 27 LIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCT 105 (283)
T ss_pred EEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeCC
Confidence 459999999999998 67899999997654333 4678899999999999999999999876 356899999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-CcccCC
Q 011519 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-RSYSTN 215 (484)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~-~~~~~t 215 (484)
+|+|.+++.. .+.+++.....++.|++.||.|||+..+++||||||+|||++.++.+||+|||+++..... ....++
T Consensus 106 ~g~L~~~l~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~ 183 (283)
T PHA02988 106 RGYLREVLDK--EKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPPFKNVNF 183 (283)
T ss_pred CCcHHHHHhh--CCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhccccccccCc
Confidence 9999999973 4578999999999999999999998448899999999999999999999999998865443 345678
Q ss_pred CCCCCcccccC--CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHHh
Q 011519 216 LAFTPPEYLRT--GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 293 (484)
Q Consensus 216 ~~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 293 (484)
+.|+|||++.+ ..++.++|||||||++|||+||+.||............. ........+...++.+.+|+.+||
T Consensus 184 ~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~----~~~~~~~~~~~~~~~l~~li~~cl 259 (283)
T PHA02988 184 MVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLII----NKNNSLKLPLDCPLEIKCIVEACT 259 (283)
T ss_pred ccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHH----hcCCCCCCCCcCcHHHHHHHHHHh
Confidence 99999999976 678999999999999999999999887543222211111 111112234456789999999999
Q ss_pred ccCCCCCCChHHHHHHHHhhhc
Q 011519 294 QYEPRERPNPRSLVTALVTLQK 315 (484)
Q Consensus 294 ~~dp~~Rps~~~il~~l~~~~~ 315 (484)
+.||++|||+.++++.|+.++.
T Consensus 260 ~~dp~~Rps~~ell~~l~~~~~ 281 (283)
T PHA02988 260 SHDSIKRPNIKEILYNLSLYKF 281 (283)
T ss_pred cCCcccCcCHHHHHHHHHHHHh
Confidence 9999999999999999987653
|
|
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-45 Score=348.04 Aligned_cols=249 Identities=17% Similarity=0.216 Sum_probs=204.0
Q ss_pred ccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCc---cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEec
Q 011519 59 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (484)
Q Consensus 59 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey 134 (484)
|++++.||+|+||+||+|. ..+++.||||.+...... ....+.+|+.++..++|+||+++++++.+.+..++||||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence 3556778999999999999 567999999998654322 234578999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC---Cc
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---RS 211 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~---~~ 211 (484)
+++|+|.+++.......+++..+..++.|++.||.|||+. +++||||||+|||+++++.++|+|||++...... ..
T Consensus 82 ~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 160 (285)
T cd05631 82 MNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRE-RIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGETVRG 160 (285)
T ss_pred cCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhC-CEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCeecC
Confidence 9999999888654455789999999999999999999999 9999999999999999999999999999875432 34
Q ss_pred ccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHH
Q 011519 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291 (484)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 291 (484)
..||+.|+|||++.+..++.++|||||||++|+|++|+.||...............+.. ....++...+..+.+|+.+
T Consensus 161 ~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~s~~~~~li~~ 238 (285)
T cd05631 161 RVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKE--DQEEYSEKFSEDAKSICRM 238 (285)
T ss_pred CCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhc--ccccCCccCCHHHHHHHHH
Confidence 56899999999999889999999999999999999999988653211111000001111 1122445567889999999
Q ss_pred HhccCCCCCCC-----hHHHHHHH
Q 011519 292 CLQYEPRERPN-----PRSLVTAL 310 (484)
Q Consensus 292 cl~~dp~~Rps-----~~~il~~l 310 (484)
||+.||.+||+ +.++++|-
T Consensus 239 ~l~~~P~~R~~~~~~~~~~~~~h~ 262 (285)
T cd05631 239 LLTKNPKERLGCRGNGAAGVKQHP 262 (285)
T ss_pred HhhcCHHHhcCCCCCCHHHHhcCH
Confidence 99999999997 88888873
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-45 Score=352.09 Aligned_cols=245 Identities=18% Similarity=0.174 Sum_probs=206.3
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCC---ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEe
Q 011519 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 133 (484)
+|++++.||+|+||+||+|.. .+++.||||++..... ...+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 81 (291)
T cd05612 2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLME 81 (291)
T ss_pred CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEe
Confidence 567888899999999999994 5789999999865322 224568899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-Ccc
Q 011519 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-RSY 212 (484)
Q Consensus 134 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~-~~~ 212 (484)
|+++|+|.+++. ..+.+++..+..++.||+.||.|||+. |++||||||+|||++.++.+||+|||++...... ...
T Consensus 82 ~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~ 158 (291)
T cd05612 82 YVPGGELFSYLR--NSGRFSNSTGLFYASEIVCALEYLHSK-EIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRTWTL 158 (291)
T ss_pred CCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCHHHeEECCCCCEEEEecCcchhccCCcccc
Confidence 999999999996 345789999999999999999999998 9999999999999999999999999998876543 345
Q ss_pred cCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHH
Q 011519 213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRC 292 (484)
Q Consensus 213 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 292 (484)
.||+.|+|||++.+..++.++|||||||++|+|++|+.||............... ...++...+..+.+|+.+|
T Consensus 159 ~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~li~~~ 232 (291)
T cd05612 159 CGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAG------KLEFPRHLDLYAKDLIKKL 232 (291)
T ss_pred cCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC------CcCCCccCCHHHHHHHHHH
Confidence 6899999999999888999999999999999999999988654322221111111 1124445577899999999
Q ss_pred hccCCCCCCC-----hHHHHHHHH
Q 011519 293 LQYEPRERPN-----PRSLVTALV 311 (484)
Q Consensus 293 l~~dp~~Rps-----~~~il~~l~ 311 (484)
|+.||.+||+ +.+++.|-+
T Consensus 233 l~~dp~~R~~~~~~~~~~~l~h~~ 256 (291)
T cd05612 233 LVVDRTRRLGNMKNGADDVKNHRW 256 (291)
T ss_pred cCCCHHHccCCccCCHHHHhcCcc
Confidence 9999999995 999998854
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-44 Score=352.87 Aligned_cols=254 Identities=18% Similarity=0.224 Sum_probs=206.4
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEec
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey 134 (484)
.+|++++.||+|+||.||+++. .++..||+|.+...... ....+.+|+++|+.++||||+++++++...+..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 84 (331)
T cd06649 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 84 (331)
T ss_pred ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeec
Confidence 4678889999999999999994 57889999998764322 245799999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC--Ccc
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSY 212 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~--~~~ 212 (484)
+++|+|.+++. ....+++..+..++.|++.||.|||+..+|+||||||+|||++.++.+||+|||++...... ...
T Consensus 85 ~~~~~L~~~l~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 162 (331)
T cd06649 85 MDGGSLDQVLK--EAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 162 (331)
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCcccccccccccccC
Confidence 99999999996 34568999999999999999999998646999999999999999999999999998765432 345
Q ss_pred cCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccc-------------------------
Q 011519 213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQT------------------------- 267 (484)
Q Consensus 213 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~------------------------- 267 (484)
.||+.|+|||++.+..++.++|||||||++|||+||+.||...............
T Consensus 163 ~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (331)
T cd06649 163 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSG 242 (331)
T ss_pred CCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccccccccccc
Confidence 6899999999999888999999999999999999999988643221111000000
Q ss_pred -----------------cccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHh
Q 011519 268 -----------------LTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVT 312 (484)
Q Consensus 268 -----------------~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~ 312 (484)
+.............++++.+|+.+||+.||++|||+.++++|.+-
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~ 304 (331)
T cd06649 243 HGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFI 304 (331)
T ss_pred cccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHH
Confidence 000000000112356789999999999999999999999999654
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-45 Score=355.75 Aligned_cols=246 Identities=15% Similarity=0.172 Sum_probs=207.3
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCC---ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEE
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 131 (484)
+.+|++++.||+|+||.||+|+. .+++.||||++..... ...+.+.+|+.++++++||||+++++++...+..++|
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 96 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFL 96 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEE
Confidence 46788899999999999999995 5689999999975322 2345688999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-C
Q 011519 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-R 210 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~-~ 210 (484)
|||+++|+|.+++. ..+.+++..+..++.||+.||.|||+. ||+||||||+|||++.++.+||+|||++...... .
T Consensus 97 ~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~ 173 (329)
T PTZ00263 97 LEFVVGGELFTHLR--KAGRFPNDVAKFYHAELVLAFEYLHSK-DIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRTF 173 (329)
T ss_pred EcCCCCChHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCHHHEEECCCCCEEEeeccCceEcCCCcc
Confidence 99999999999997 345689999999999999999999999 9999999999999999999999999999876543 3
Q ss_pred cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHH
Q 011519 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (484)
Q Consensus 211 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (484)
...||+.|+|||++.+..++.++|||||||++|+|++|..||.............. . ...++...+..+.+|+.
T Consensus 174 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~----~--~~~~p~~~~~~~~~li~ 247 (329)
T PTZ00263 174 TLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILA----G--RLKFPNWFDGRARDLVK 247 (329)
T ss_pred eecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhc----C--CcCCCCCCCHHHHHHHH
Confidence 46789999999999988899999999999999999999998865432221111111 1 11234445678999999
Q ss_pred HHhccCCCCCCC-----hHHHHHHH
Q 011519 291 RCLQYEPRERPN-----PRSLVTAL 310 (484)
Q Consensus 291 ~cl~~dp~~Rps-----~~~il~~l 310 (484)
+||+.||.+||+ +.+++.|-
T Consensus 248 ~~L~~dP~~R~~~~~~~~~~ll~hp 272 (329)
T PTZ00263 248 GLLQTDHTKRLGTLKGGVADVKNHP 272 (329)
T ss_pred HHhhcCHHHcCCCCCCCHHHHhcCC
Confidence 999999999986 68888874
|
|
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-44 Score=353.51 Aligned_cols=237 Identities=18% Similarity=0.228 Sum_probs=200.6
Q ss_pred cCCCCCCceEEEEE-eCCCcEEEEEEecCCCC---ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCCCCC
Q 011519 64 EHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT 139 (484)
Q Consensus 64 ~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~~gs 139 (484)
.||+|+||.||++. ..+|+.||||+++.... .....+.+|+.++++++||||+++++++...+..++||||+++|+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~ 81 (323)
T cd05571 2 LLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGGE 81 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCCc
Confidence 47999999999999 46789999999975321 234568899999999999999999999999999999999999999
Q ss_pred HHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC----CCcccCC
Q 011519 140 LAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYSTN 215 (484)
Q Consensus 140 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~----~~~~~~t 215 (484)
|.+++. ..+.+++..+..++.||+.||.|||+. ||+||||||+|||++.++.+||+|||+++.... .....||
T Consensus 82 L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~lH~~-~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt 158 (323)
T cd05571 82 LFFHLS--RERVFSEDRARFYGAEIVSALGYLHSC-DVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGT 158 (323)
T ss_pred HHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhC-CeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccceecC
Confidence 999996 445789999999999999999999999 999999999999999999999999999875322 2345689
Q ss_pred CCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHHhcc
Q 011519 216 LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQY 295 (484)
Q Consensus 216 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 295 (484)
+.|+|||++.+..++.++|||||||++|||+||+.||............... ...++...++++.+|+.+||..
T Consensus 159 ~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~------~~~~p~~~~~~~~~li~~~L~~ 232 (323)
T cd05571 159 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME------EIRFPRTLSPEAKSLLAGLLKK 232 (323)
T ss_pred ccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHHHHHHHccC
Confidence 9999999999888999999999999999999999988654332222111111 1134556678899999999999
Q ss_pred CCCCCC-----ChHHHHHH
Q 011519 296 EPRERP-----NPRSLVTA 309 (484)
Q Consensus 296 dp~~Rp-----s~~~il~~ 309 (484)
||++|| ++.++++|
T Consensus 233 dP~~R~~~~~~~~~~ll~h 251 (323)
T cd05571 233 DPKQRLGGGPEDAKEIMEH 251 (323)
T ss_pred CHHHcCCCCCCCHHHHHcC
Confidence 999999 79999887
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-45 Score=351.90 Aligned_cols=252 Identities=21% Similarity=0.315 Sum_probs=206.2
Q ss_pred cccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCcc--HHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecC
Q 011519 58 MENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~ 135 (484)
+..+..+||+|.||+||+|.+-. .||||+++.....+ .+.|.+|+.++++-+|-||+-+.|+|..++. .||+.+|
T Consensus 393 ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIiTqwC 469 (678)
T KOG0193|consen 393 EVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AIITQWC 469 (678)
T ss_pred Hhhccceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eeeehhc
Confidence 34566789999999999999743 59999998765544 6679999999999999999999999988877 9999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC------C
Q 011519 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD------G 209 (484)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~------~ 209 (484)
+|.||..+|+- ....|+......|+.||++|+.|||.+ +|||||||..||++.++++|||+|||++..... .
T Consensus 470 eGsSLY~hlHv-~etkfdm~~~idIAqQiaqGM~YLHAK-~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q~ 547 (678)
T KOG0193|consen 470 EGSSLYTHLHV-QETKFDMNTTIDIAQQIAQGMDYLHAK-NIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQL 547 (678)
T ss_pred cCchhhhhccc-hhhhhhHHHHHHHHHHHHHhhhhhhhh-hhhhhhccccceEEccCCcEEEecccceeeeeeecccccc
Confidence 99999999975 335689999999999999999999999 999999999999999999999999999865332 1
Q ss_pred CcccCCCCCCCcccccCC---CCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHH
Q 011519 210 RSYSTNLAFTPPEYLRTG---RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 286 (484)
Q Consensus 210 ~~~~~t~~y~aPE~~~~~---~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 286 (484)
....|...|||||+++.+ +|++.+||||||+|+|||+||..|+.....+-+.-........+. .......++.++.
T Consensus 548 ~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd-~s~~~s~~pk~mk 626 (678)
T KOG0193|consen 548 EQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPD-LSKIRSNCPKAMK 626 (678)
T ss_pred CCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCcc-chhhhccCHHHHH
Confidence 345567889999999853 589999999999999999999998764322222111111111110 0123355678999
Q ss_pred HHHHHHhccCCCCCCChHHHHHHHHhhhc
Q 011519 287 RLASRCLQYEPRERPNPRSLVTALVTLQK 315 (484)
Q Consensus 287 ~li~~cl~~dp~~Rps~~~il~~l~~~~~ 315 (484)
+|+..||.+++++||.+.+|+..|+.+..
T Consensus 627 ~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 627 RLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred HHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 99999999999999999999998887765
|
|
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-45 Score=369.70 Aligned_cols=253 Identities=25% Similarity=0.375 Sum_probs=210.0
Q ss_pred ccccccCCCCCCceEEEEEe------CCCcEEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEE
Q 011519 59 ENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (484)
Q Consensus 59 ~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 131 (484)
....++||+|+||+||+|.. .+...||||.++..... ...+|.+|+++|..++|||||+++|+|.+++..+||
T Consensus 488 i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~Mv 567 (774)
T KOG1026|consen 488 IVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCMV 567 (774)
T ss_pred eeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEEE
Confidence 34568899999999999983 23467999999987655 467899999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccC--------C----CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeec
Q 011519 132 AEYMPNDTLAKHLFHW--------E----TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSC 199 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~--------~----~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~D 199 (484)
+|||..|+|.+||..+ . ..+++..+.+.|+.|||.||.||-+. .+|||||-..|+||+++..|||+|
T Consensus 568 FEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~-~FVHRDLATRNCLVge~l~VKIsD 646 (774)
T KOG1026|consen 568 FEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH-HFVHRDLATRNCLVGENLVVKISD 646 (774)
T ss_pred EEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-cccccchhhhhceeccceEEEecc
Confidence 9999999999999743 1 22388999999999999999999998 999999999999999999999999
Q ss_pred cCCccccCCCCcc------cCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhcccccccccc
Q 011519 200 FGLMKNSRDGRSY------STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSC 272 (484)
Q Consensus 200 fG~a~~~~~~~~~------~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 272 (484)
||+++..-...-+ .-.+.||+||.++.+.+|.+||||||||+|||+++ |+-|+.+...+.+.+.... ..
T Consensus 647 fGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~~----g~ 722 (774)
T KOG1026|consen 647 FGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIRA----GQ 722 (774)
T ss_pred cccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHHc----CC
Confidence 9999875443221 22478999999999999999999999999999998 5556554332222211111 11
Q ss_pred ccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhcCC
Q 011519 273 LEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (484)
Q Consensus 273 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 317 (484)
+ -..|..+|.++.+|+..||+.+|.+|||+.||-..|+......
T Consensus 723 l-L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s 766 (774)
T KOG1026|consen 723 L-LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQAS 766 (774)
T ss_pred c-ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcC
Confidence 1 1346778899999999999999999999999999999876543
|
|
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-43 Score=368.34 Aligned_cols=255 Identities=19% Similarity=0.186 Sum_probs=203.7
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCc---cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 132 (484)
.+|++++.||+|+||.||+|.. .+++.||||++...... ..++|.+|+.++++++||||+++++++.+.+..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 4678889999999999999994 56899999999754322 2457999999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCC---------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCc
Q 011519 133 EYMPNDTLAKHLFHWE---------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLM 203 (484)
Q Consensus 133 Ey~~~gsL~~~l~~~~---------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a 203 (484)
||++||+|.+++.... ...+++..++.++.||+.||.|||+. ||+||||||+|||++.++.++|+|||++
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~-GIIHRDLKPeNILLd~dg~vKLiDFGLA 160 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK-GVLHRDLKPDNILLGLFGEVVILDWGAA 160 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC-CccccCCchheEEEcCCCCEEEEecCcc
Confidence 9999999999985311 23456778899999999999999999 9999999999999999999999999998
Q ss_pred cccCC----------------------CCcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhh
Q 011519 204 KNSRD----------------------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIR 261 (484)
Q Consensus 204 ~~~~~----------------------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~ 261 (484)
+.... .....||+.|+|||++.+..++.++|||||||++|||+||+.||.........
T Consensus 161 k~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~ 240 (932)
T PRK13184 161 IFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRKIS 240 (932)
T ss_pred eecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhh
Confidence 76511 01245899999999999989999999999999999999999988653222111
Q ss_pred hccccccccccccCCCChHHHHHHHHHHHHHhccCCCCCC-ChHHHHHHHHhhhc
Q 011519 262 DRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP-NPRSLVTALVTLQK 315 (484)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp-s~~~il~~l~~~~~ 315 (484)
.. .....+. ........++.+.+++.+||+.||++|| +++++++.|+....
T Consensus 241 ~~--~~i~~P~-~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq 292 (932)
T PRK13184 241 YR--DVILSPI-EVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQ 292 (932)
T ss_pred hh--hhccChh-hccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 11 1111110 0001124567899999999999999996 67777777776543
|
|
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-44 Score=346.42 Aligned_cols=237 Identities=18% Similarity=0.197 Sum_probs=198.6
Q ss_pred CCCCCCceEEEEEe-CCCcEEEEEEecCCC---CccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCCCCCH
Q 011519 65 HGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTL 140 (484)
Q Consensus 65 lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~~gsL 140 (484)
||+|+||+||+|+. .+++.||||+++... ......+.+|+.++.+++||||+++++++...+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 69999999999994 568899999986532 22345688999999999999999999999999999999999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC----CCcccCCC
Q 011519 141 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYSTNL 216 (484)
Q Consensus 141 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~----~~~~~~t~ 216 (484)
.+++. ..+.+++..+..++.||+.||.|||+. ||+||||||+|||++.++.+||+|||+++.... .....||+
T Consensus 81 ~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~ 157 (312)
T cd05585 81 FHHLQ--REGRFDLSRARFYTAELLCALENLHKF-NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTP 157 (312)
T ss_pred HHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhC-CeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccCCc
Confidence 99996 345699999999999999999999998 999999999999999999999999999875422 23456899
Q ss_pred CCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHHhccC
Q 011519 217 AFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYE 296 (484)
Q Consensus 217 ~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 296 (484)
.|+|||++.+..++.++|||||||++|+|+||+.||............... ...++...++.+.+|+.+||..|
T Consensus 158 ~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~li~~~L~~d 231 (312)
T cd05585 158 EYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQE------PLRFPDGFDRDAKDLLIGLLSRD 231 (312)
T ss_pred ccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcC------CCCCCCcCCHHHHHHHHHHcCCC
Confidence 999999999888999999999999999999999998754333222111111 11344556788999999999999
Q ss_pred CCCCCC---hHHHHHHH
Q 011519 297 PRERPN---PRSLVTAL 310 (484)
Q Consensus 297 p~~Rps---~~~il~~l 310 (484)
|.+||+ +.+++.|-
T Consensus 232 p~~R~~~~~~~e~l~hp 248 (312)
T cd05585 232 PTRRLGYNGAQEIKNHP 248 (312)
T ss_pred HHHcCCCCCHHHHHcCC
Confidence 999975 67777763
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-44 Score=352.13 Aligned_cols=247 Identities=17% Similarity=0.195 Sum_probs=206.3
Q ss_pred CCCcccccccCCCCCCceEEEEEeC-C-CcEEEEEEecCCC---CccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceE
Q 011519 55 GFAMENIVSEHGEKAPNVVYKGKLE-N-QFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129 (484)
Q Consensus 55 ~f~~~~~~~~lG~G~~g~Vy~~~~~-~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 129 (484)
.+.+|.+++.||+|+||.||+|... + +..||||++.... ....+.+.+|+.++..++||||+++++++.+.+..+
T Consensus 28 ~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~ 107 (340)
T PTZ00426 28 KYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLY 107 (340)
T ss_pred ChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEE
Confidence 3557888899999999999999843 3 3689999986432 123456889999999999999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC
Q 011519 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 209 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 209 (484)
+||||+++|+|.+++. ..+.+++..+..++.||+.||.|||+. |++||||||+|||++.++.+||+|||++......
T Consensus 108 lv~Ey~~~g~L~~~i~--~~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~ 184 (340)
T PTZ00426 108 LVLEFVIGGEFFTFLR--RNKRFPNDVGCFYAAQIVLIFEYLQSL-NIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTR 184 (340)
T ss_pred EEEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEccCCCHHHEEECCCCCEEEecCCCCeecCCC
Confidence 9999999999999996 345689999999999999999999999 9999999999999999999999999999876443
Q ss_pred -CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHH
Q 011519 210 -RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288 (484)
Q Consensus 210 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 288 (484)
....||+.|+|||++.+..++.++|||||||++|||++|..||................ ..++...+..+.++
T Consensus 185 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~------~~~p~~~~~~~~~l 258 (340)
T PTZ00426 185 TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGI------IYFPKFLDNNCKHL 258 (340)
T ss_pred cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCC------CCCCCCCCHHHHHH
Confidence 35678999999999998889999999999999999999999887543222211111111 12344556789999
Q ss_pred HHHHhccCCCCCC-----ChHHHHHHH
Q 011519 289 ASRCLQYEPRERP-----NPRSLVTAL 310 (484)
Q Consensus 289 i~~cl~~dp~~Rp-----s~~~il~~l 310 (484)
+.+||+.||.+|+ +++++++|.
T Consensus 259 i~~~l~~dp~~R~~~~~~~~~~~~~hp 285 (340)
T PTZ00426 259 MKKLLSHDLTKRYGNLKKGAQNVKEHP 285 (340)
T ss_pred HHHHcccCHHHcCCCCCCCHHHHHcCC
Confidence 9999999999995 899998884
|
|
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-44 Score=347.98 Aligned_cols=238 Identities=18% Similarity=0.231 Sum_probs=200.5
Q ss_pred cCCCCCCceEEEEE-eCCCcEEEEEEecCCCC---ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCCCCC
Q 011519 64 EHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT 139 (484)
Q Consensus 64 ~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~~gs 139 (484)
.||+|+||.||++. ..+++.||||++..... .....+.+|+.+++.++||||+++++++...+..++||||+++|+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~ 81 (328)
T cd05593 2 LLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGE 81 (328)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCCC
Confidence 46999999999999 56789999999975422 234578899999999999999999999999999999999999999
Q ss_pred HHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC----CCcccCC
Q 011519 140 LAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYSTN 215 (484)
Q Consensus 140 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~----~~~~~~t 215 (484)
|.+++. ..+.+++..+..++.||+.||.|||+. ||+||||||+|||++.++.+||+|||+++.... .....||
T Consensus 82 L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~LH~~-~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt 158 (328)
T cd05593 82 LFFHLS--RERVFSEDRTRFYGAEIVSALDYLHSG-KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCGT 158 (328)
T ss_pred HHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhC-CeEecccCHHHeEECCCCcEEEecCcCCccCCCcccccccccCC
Confidence 999986 345799999999999999999999999 999999999999999999999999999875322 1345689
Q ss_pred CCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHHhcc
Q 011519 216 LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQY 295 (484)
Q Consensus 216 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 295 (484)
+.|+|||++.+..++.++|||||||++|+|++|+.||............... ...++...+.++.+|+.+||..
T Consensus 159 ~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~------~~~~p~~~~~~~~~li~~~L~~ 232 (328)
T cd05593 159 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME------DIKFPRTLSADAKSLLSGLLIK 232 (328)
T ss_pred cCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccC------CccCCCCCCHHHHHHHHHHcCC
Confidence 9999999999888999999999999999999999988654332222111111 1134556678899999999999
Q ss_pred CCCCCC-----ChHHHHHHH
Q 011519 296 EPRERP-----NPRSLVTAL 310 (484)
Q Consensus 296 dp~~Rp-----s~~~il~~l 310 (484)
||++|| ++.++++|.
T Consensus 233 dP~~R~~~~~~~~~~il~h~ 252 (328)
T cd05593 233 DPNKRLGGGPDDAKEIMRHS 252 (328)
T ss_pred CHHHcCCCCCCCHHHHhcCC
Confidence 999997 899999874
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-45 Score=333.51 Aligned_cols=248 Identities=23% Similarity=0.288 Sum_probs=196.7
Q ss_pred cccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCC-----ceEEEEecC
Q 011519 62 VSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD-----ERLLVAEYM 135 (484)
Q Consensus 62 ~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~-----~~~lv~Ey~ 135 (484)
.+.+|.|+||.||+|. ..+++.||||++..+. +--.+|+++|+.++|||||++.-+|.... ...+|||||
T Consensus 29 ~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~----r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleym 104 (364)
T KOG0658|consen 29 VRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDK----RYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYM 104 (364)
T ss_pred eEEEeecccceEEEEEEcCCCceeEEEEecCCC----CcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhc
Confidence 3445999999999999 5667999999986443 22347999999999999999999986532 346899999
Q ss_pred CCCCHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCC-CCceeeccCCccccCCC---
Q 011519 136 PNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD-VNPRLSCFGLMKNSRDG--- 209 (484)
Q Consensus 136 ~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~-~~~kl~DfG~a~~~~~~--- 209 (484)
+. ||.+++++. .+..++...+.-+.+||.+||.|||+. ||+||||||.|+|+|.+ |.+||||||.|+....+
T Consensus 105 P~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~-~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~epn 182 (364)
T KOG0658|consen 105 PE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH-GICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGEPN 182 (364)
T ss_pred hH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc-CcccCCCChheEEEcCCCCeEEeccCCcceeeccCCCc
Confidence 87 999999742 356788889999999999999999997 99999999999999955 99999999999987554
Q ss_pred CcccCCCCCCCcccccCCC-CCCCCceeehHHHHHHHhhCCCCCCchhhHH----------------hhhcc-------c
Q 011519 210 RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDL----------------IRDRN-------I 265 (484)
Q Consensus 210 ~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~----------------~~~~~-------~ 265 (484)
.++..|..|+|||.+.|.. |+.+.||||.|||+.||+-|++.|+++.... +.... .
T Consensus 183 iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~ 262 (364)
T KOG0658|consen 183 ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKF 262 (364)
T ss_pred eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccC
Confidence 4677899999999999854 9999999999999999999999888752211 11111 1
Q ss_pred cccccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHH--HHhhhc
Q 011519 266 QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA--LVTLQK 315 (484)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~--l~~~~~ 315 (484)
..+....+..-+....++++.+|+.++|+.+|.+|.++.+++.| ++.++.
T Consensus 263 p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~ 314 (364)
T KOG0658|consen 263 PQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRD 314 (364)
T ss_pred cccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhC
Confidence 11111111111345567899999999999999999999999988 444443
|
|
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-44 Score=349.02 Aligned_cols=251 Identities=17% Similarity=0.161 Sum_probs=206.6
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCC---ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEe
Q 011519 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 133 (484)
+|++++.||.|+||.||+|+. .+++.||||+++.... ...+.+.+|+.++..++||||+++++++...+..+||||
T Consensus 2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e 81 (333)
T cd05600 2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAME 81 (333)
T ss_pred CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEe
Confidence 577889999999999999995 4688999999975421 234568899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC-CCcc
Q 011519 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-GRSY 212 (484)
Q Consensus 134 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~-~~~~ 212 (484)
|++||+|.+++. ..+.+++..+..++.||+.||.|||+. |++||||||+|||++.++.+||+|||++..... ....
T Consensus 82 ~~~g~~L~~~l~--~~~~l~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~~~~~ 158 (333)
T cd05600 82 YVPGGDFRTLLN--NLGVLSEDHARFYMAEMFEAVDALHEL-GYIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYANSV 158 (333)
T ss_pred CCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEECCCCCEEEEeCcCCcccccccCCc
Confidence 999999999996 445789999999999999999999999 999999999999999999999999999886544 3456
Q ss_pred cCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcc--ccccccccccCCCChHHHHHHHHHHH
Q 011519 213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN--IQTLTDSCLEGQFSSDEGTELVRLAS 290 (484)
Q Consensus 213 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (484)
.||+.|+|||++.+..++.++|||||||++|||++|..||............ .................+.++.+|+.
T Consensus 159 ~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~ 238 (333)
T cd05600 159 VGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLIT 238 (333)
T ss_pred ccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHHHHH
Confidence 7899999999999889999999999999999999999988654322211110 00001000000011245688999999
Q ss_pred HHhccCCCCCCChHHHHHHHH
Q 011519 291 RCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~l~ 311 (484)
+||..+|.+|||+.+++.+.+
T Consensus 239 ~~l~~~~~rr~s~~~ll~h~~ 259 (333)
T cd05600 239 KLINDPSRRFGSLEDIKNHPF 259 (333)
T ss_pred HHhhChhhhcCCHHHHHhCcc
Confidence 999999999999999999843
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-44 Score=329.67 Aligned_cols=247 Identities=20% Similarity=0.311 Sum_probs=201.2
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEecC--CCCccHHHHHHHHHHHhcCCCCceeeeeeeeee-----CCceE
Q 011519 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNR--SAWPDARQFLEEARAVGQLRNRRLANLLGCCCE-----GDERL 129 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-----~~~~~ 129 (484)
.|..++.||+|+||.|..+. ..+|..||||++.. ......++-.+|+.+|+.++|+||+.+.+++.. .+.+|
T Consensus 23 ~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvY 102 (359)
T KOG0660|consen 23 YYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVY 102 (359)
T ss_pred eecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeE
Confidence 34447889999999999999 67899999999973 334457889999999999999999999999865 35689
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC-
Q 011519 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD- 208 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~- 208 (484)
+|+|+| +-+|.+.|+ .+..++...+..++.||++||.|+|+. +++||||||+|+|++.+..+||+|||+|+....
T Consensus 103 iV~elM-etDL~~iik--~~~~L~d~H~q~f~YQiLrgLKyiHSA-nViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~ 178 (359)
T KOG0660|consen 103 LVFELM-ETDLHQIIK--SQQDLTDDHAQYFLYQILRGLKYIHSA-NVIHRDLKPSNLLLNADCDLKICDFGLARYLDKF 178 (359)
T ss_pred EehhHH-hhHHHHHHH--cCccccHHHHHHHHHHHHHhcchhhcc-cccccccchhheeeccCCCEEeccccceeecccc
Confidence 999999 559999996 445599999999999999999999999 999999999999999999999999999998743
Q ss_pred -----CCcccCCCCCCCcccccC-CCCCCCCceeehHHHHHHHhhCCCCCCchhh-------------------HHhhhc
Q 011519 209 -----GRSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHAL-------------------DLIRDR 263 (484)
Q Consensus 209 -----~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~-------------------~~~~~~ 263 (484)
-+.+..|.+|.|||.+.. ..||.+.||||.|||+.||++|++.|++... ..+...
T Consensus 179 ~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~ 258 (359)
T KOG0660|consen 179 FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSE 258 (359)
T ss_pred CcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccH
Confidence 145677999999999875 4599999999999999999999998876411 001100
Q ss_pred ccccccc-------ccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 264 NIQTLTD-------SCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 264 ~~~~~~~-------~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
.....+. ......+ +..++...+|+.+||..||.+|+|+++.++|
T Consensus 259 ~ar~yi~slp~~p~~~f~~~f-p~a~p~AidLlekmL~fdP~kRita~eAL~h 310 (359)
T KOG0660|consen 259 KARPYIKSLPQIPKQPFSSIF-PNANPLAIDLLEKMLVFDPKKRITAEEALAH 310 (359)
T ss_pred HHHHHHHhCCCCCCCCHHHHc-CCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 0000110 0001112 2557889999999999999999999999998
|
|
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-43 Score=347.33 Aligned_cols=254 Identities=24% Similarity=0.374 Sum_probs=210.8
Q ss_pred cccccCCCCCCceEEEEEeC--CC---cEEEEEEecCCC---CccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEE
Q 011519 60 NIVSEHGEKAPNVVYKGKLE--NQ---FRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (484)
Q Consensus 60 ~~~~~lG~G~~g~Vy~~~~~--~~---~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 131 (484)
.+.++||+|+||.||+|++. ++ ..||||..+... ......|++|+++|++++|||||+++|++.....++||
T Consensus 160 ~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~iv 239 (474)
T KOG0194|consen 160 ELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLV 239 (474)
T ss_pred cccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEE
Confidence 44578999999999999943 22 238999987522 22366799999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCCc
Q 011519 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS 211 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 211 (484)
||+|+||+|.++|.... ..++..+...++.+.+.||+|||++ ++|||||-.+|+|++.++.+||+|||+++.......
T Consensus 240 mEl~~gGsL~~~L~k~~-~~v~~~ek~~~~~~AA~Gl~YLh~k-~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~~ 317 (474)
T KOG0194|consen 240 MELCNGGSLDDYLKKNK-KSLPTLEKLRFCYDAARGLEYLHSK-NCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYVM 317 (474)
T ss_pred EEecCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHhHHHHHHHC-CCcchhHhHHHheecCCCeEEeCccccccCCcceee
Confidence 99999999999997533 3699999999999999999999999 999999999999999999999999999877542211
Q ss_pred ----ccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHHHH
Q 011519 212 ----YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 286 (484)
Q Consensus 212 ----~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 286 (484)
-.-...|+|||.+..+.+++++|||||||++||+++ |..|+++.....+..... ....+...+...+..+.
T Consensus 318 ~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~----~~~~r~~~~~~~p~~~~ 393 (474)
T KOG0194|consen 318 KKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIV----KNGYRMPIPSKTPKELA 393 (474)
T ss_pred ccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHH----hcCccCCCCCCCHHHHH
Confidence 123468999999999999999999999999999999 777877655443333321 12223344556788999
Q ss_pred HHHHHHhccCCCCCCChHHHHHHHHhhhcCCCC
Q 011519 287 RLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 319 (484)
Q Consensus 287 ~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~~ 319 (484)
.++.+||..+|++||||.++.+.|+.+......
T Consensus 394 ~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~~ 426 (474)
T KOG0194|consen 394 KVMKQCWKKDPEDRPTMSTIKKKLEALEKKKEA 426 (474)
T ss_pred HHHHHhccCChhhccCHHHHHHHHHHHHhcccc
Confidence 999999999999999999999999998877654
|
|
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-44 Score=347.03 Aligned_cols=238 Identities=18% Similarity=0.237 Sum_probs=199.4
Q ss_pred cCCCCCCceEEEEE-eCCCcEEEEEEecCCCC---ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCCCCC
Q 011519 64 EHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT 139 (484)
Q Consensus 64 ~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~~gs 139 (484)
.||+|+||.||++. ..+|..||+|+++.... .....+.+|+.+++.++||||+++++++...+..++||||+++|+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~ 81 (323)
T cd05595 2 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGE 81 (323)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCCc
Confidence 46999999999999 45789999999975321 234567889999999999999999999999999999999999999
Q ss_pred HHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----CcccCC
Q 011519 140 LAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSYSTN 215 (484)
Q Consensus 140 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~----~~~~~t 215 (484)
|..++. ..+.+++..+..++.||+.||.|||+. |++||||||+|||++.++.+||+|||++...... ....||
T Consensus 82 L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt 158 (323)
T cd05595 82 LFFHLS--RERVFTEERARFYGAEIVSALEYLHSR-DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGT 158 (323)
T ss_pred HHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccccCC
Confidence 999886 345789999999999999999999999 9999999999999999999999999998753221 245689
Q ss_pred CCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHHhcc
Q 011519 216 LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQY 295 (484)
Q Consensus 216 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 295 (484)
+.|+|||++.+..++.++|||||||++|||++|+.||............... ...++...++++.+++.+||..
T Consensus 159 ~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~------~~~~p~~~~~~~~~li~~~L~~ 232 (323)
T cd05595 159 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME------EIRFPRTLSPEAKSLLAGLLKK 232 (323)
T ss_pred cCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcC------CCCCCCCCCHHHHHHHHHHccC
Confidence 9999999999888999999999999999999999988654322221111110 1124455678899999999999
Q ss_pred CCCCCC-----ChHHHHHHH
Q 011519 296 EPRERP-----NPRSLVTAL 310 (484)
Q Consensus 296 dp~~Rp-----s~~~il~~l 310 (484)
||.+|| ++.++++|-
T Consensus 233 dP~~R~~~~~~~~~~~l~h~ 252 (323)
T cd05595 233 DPKQRLGGGPSDAKEVMEHR 252 (323)
T ss_pred CHHHhCCCCCCCHHHHHcCC
Confidence 999998 899998874
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-44 Score=350.61 Aligned_cols=245 Identities=18% Similarity=0.282 Sum_probs=211.1
Q ss_pred CCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCC---ccHHHHHHHHHHHhcC-CCCceeeeeeeeeeCCceE
Q 011519 55 GFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL 129 (484)
Q Consensus 55 ~f~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~ 129 (484)
+..++++++.||+|+||+|+++. ..+++.+|||++++... .+.+..+.|-.++... +||.+++++..|++.+++|
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~ 445 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLF 445 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEE
Confidence 44566788899999999999999 55788999999987643 3466788898888887 5999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccC--
Q 011519 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR-- 207 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~-- 207 (484)
+||||+.||++..++ ..+.|++..+..++..|+.||.|||++ ||||||||.+|||+|.+|.+||+|||+++..-
T Consensus 446 fvmey~~Ggdm~~~~---~~~~F~e~rarfyaAev~l~L~fLH~~-~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~ 521 (694)
T KOG0694|consen 446 FVMEYVAGGDLMHHI---HTDVFSEPRARFYAAEVVLGLQFLHEN-GIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQ 521 (694)
T ss_pred EEEEecCCCcEEEEE---ecccccHHHHHHHHHHHHHHHHHHHhc-CceeeecchhheEEcccCcEEecccccccccCCC
Confidence 999999999955544 446799999999999999999999999 99999999999999999999999999998632
Q ss_pred --CCCcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHH
Q 011519 208 --DGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 285 (484)
Q Consensus 208 --~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 285 (484)
...+.+|||.|||||++.+..|+...|.|||||+||||++|..||+++..+.+-+..+.. ...+|..++.+.
T Consensus 522 g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d------~~~yP~~ls~ea 595 (694)
T KOG0694|consen 522 GDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVND------EVRYPRFLSKEA 595 (694)
T ss_pred CCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcC------CCCCCCcccHHH
Confidence 346789999999999999999999999999999999999999999987666554443332 124677788999
Q ss_pred HHHHHHHhccCCCCCCC-----hHHHHHH
Q 011519 286 VRLASRCLQYEPRERPN-----PRSLVTA 309 (484)
Q Consensus 286 ~~li~~cl~~dp~~Rps-----~~~il~~ 309 (484)
.+++.++|.++|++|.. +.+|..|
T Consensus 596 ~~il~~ll~k~p~kRLG~~e~d~~~i~~h 624 (694)
T KOG0694|consen 596 IAIMRRLLRKNPEKRLGSGERDAEDIKKH 624 (694)
T ss_pred HHHHHHHhccCcccccCCCCCCchhhhhC
Confidence 99999999999999974 4566655
|
|
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-43 Score=352.44 Aligned_cols=250 Identities=21% Similarity=0.312 Sum_probs=200.4
Q ss_pred cccccccCCCCCCceEEEEEe------CCCcEEEEEEecCCCC-ccHHHHHHHHHHHhcC-CCCceeeeeeeeeeCCceE
Q 011519 58 MENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL 129 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~ 129 (484)
++++.+.||+|+||+||+|+. .++..||||+++.... ...+.+.+|+.++..+ +||||+++++++...+..+
T Consensus 36 ~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~~ 115 (375)
T cd05104 36 RLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPTL 115 (375)
T ss_pred HeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcce
Confidence 567778899999999999973 3466899999975432 2355789999999999 8999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCC-------------------------------------------------------------
Q 011519 130 LVAEYMPNDTLAKHLFHWE------------------------------------------------------------- 148 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~~~------------------------------------------------------------- 148 (484)
+||||+++|+|.+++....
T Consensus 116 lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (375)
T cd05104 116 VITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYI 195 (375)
T ss_pred eeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccceec
Confidence 9999999999999986421
Q ss_pred ------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCC------
Q 011519 149 ------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR------ 210 (484)
Q Consensus 149 ------------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~------ 210 (484)
...+++..+..++.||+.||.|||+. |++||||||+|||++.++.+||+|||+++......
T Consensus 196 ~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 274 (375)
T cd05104 196 DQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK-NCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKG 274 (375)
T ss_pred ccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCchhhEEEECCCcEEEecCccceeccCcccccccC
Confidence 12478899999999999999999998 99999999999999999999999999987654322
Q ss_pred cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHH
Q 011519 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289 (484)
Q Consensus 211 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 289 (484)
...++..|+|||++.+..++.++|||||||++|||++ |..||.....+.... ...........+...+.++.+|+
T Consensus 275 ~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~li 350 (375)
T cd05104 275 NARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFY----KMIKEGYRMLSPECAPSEMYDIM 350 (375)
T ss_pred CCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHH----HHHHhCccCCCCCCCCHHHHHHH
Confidence 1233567999999998899999999999999999998 776665432111100 01111111112233457899999
Q ss_pred HHHhccCCCCCCChHHHHHHHHh
Q 011519 290 SRCLQYEPRERPNPRSLVTALVT 312 (484)
Q Consensus 290 ~~cl~~dp~~Rps~~~il~~l~~ 312 (484)
.+||+.||++|||+.+|++.|+.
T Consensus 351 ~~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 351 KSCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred HHHccCChhHCcCHHHHHHHHHh
Confidence 99999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-44 Score=352.98 Aligned_cols=251 Identities=22% Similarity=0.349 Sum_probs=202.2
Q ss_pred cccccccCCCCCCceEEEEEe------CCCcEEEEEEecCCCCc-cHHHHHHHHHHHhcC-CCCceeeeeeeeeeCCceE
Q 011519 58 MENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL 129 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~ 129 (484)
++++.+.||+|+||.||+|+. .++..||||+++..... ....+.+|+.+++.+ +|||||++++++...+..+
T Consensus 39 ~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~~ 118 (374)
T cd05106 39 NLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPVL 118 (374)
T ss_pred HceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCeE
Confidence 567788899999999999983 22457999999765433 245688999999999 8999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCC-------------------------------------------------------------
Q 011519 130 LVAEYMPNDTLAKHLFHWE------------------------------------------------------------- 148 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~~~------------------------------------------------------------- 148 (484)
+||||+++|+|.+++....
T Consensus 119 lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (374)
T cd05106 119 VITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSK 198 (374)
T ss_pred EeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccccccc
Confidence 9999999999999985311
Q ss_pred -------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCC------cccCC
Q 011519 149 -------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR------SYSTN 215 (484)
Q Consensus 149 -------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~------~~~~t 215 (484)
..++++..+++++.||+.||.|||+. |++||||||+|||+++++.+||+|||+++...... ...++
T Consensus 199 ~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~-giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~ 277 (374)
T cd05106 199 DEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK-NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLP 277 (374)
T ss_pred chhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC-CEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCCCc
Confidence 13478899999999999999999998 99999999999999999999999999987654322 12345
Q ss_pred CCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHHhc
Q 011519 216 LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ 294 (484)
Q Consensus 216 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 294 (484)
+.|+|||++.+..++.++|||||||++|+|++ |+.||+....... .............+...++++.+++.+||+
T Consensus 278 ~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 353 (374)
T cd05106 278 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSK----FYKMVKRGYQMSRPDFAPPEIYSIMKMCWN 353 (374)
T ss_pred cceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHH----HHHHHHcccCccCCCCCCHHHHHHHHHHcC
Confidence 67999999998889999999999999999997 9888765422111 111111111112233346789999999999
Q ss_pred cCCCCCCChHHHHHHHHhh
Q 011519 295 YEPRERPNPRSLVTALVTL 313 (484)
Q Consensus 295 ~dp~~Rps~~~il~~l~~~ 313 (484)
.||.+|||+.++++.|+.+
T Consensus 354 ~dp~~RPs~~~l~~~l~~~ 372 (374)
T cd05106 354 LEPTERPTFSQISQLIQRQ 372 (374)
T ss_pred CChhhCcCHHHHHHHHHHH
Confidence 9999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-44 Score=310.72 Aligned_cols=254 Identities=19% Similarity=0.187 Sum_probs=209.9
Q ss_pred CCcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCC-----ceE
Q 011519 56 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD-----ERL 129 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~-----~~~ 129 (484)
=.+|++.+.||+|||+.||++. ..++..+|+|++.-....+.+..++|++..++++||||++++++..... ..|
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~y 99 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAY 99 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEE
Confidence 3689999999999999999999 7788999999998877777888999999999999999999999875443 489
Q ss_pred EEEecCCCCCHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCC--cccccccccceeecCCCCceeeccCCccc
Q 011519 130 LVAEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKER--ALYHDLNAYRIVFDDDVNPRLSCFGLMKN 205 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~lH~~~~--ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 205 (484)
|+++|...|||.+.|... ++..+++.+++.|+.+|++||.+||+. . ..||||||.|||+++.+.++|.|||.+..
T Consensus 100 ll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~ 178 (302)
T KOG2345|consen 100 LLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGSATQ 178 (302)
T ss_pred EEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccCccc
Confidence 999999999999999643 344699999999999999999999998 5 89999999999999999999999999875
Q ss_pred cCCC-------------CcccCCCCCCCccccc---CCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccc
Q 011519 206 SRDG-------------RSYSTNLAFTPPEYLR---TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLT 269 (484)
Q Consensus 206 ~~~~-------------~~~~~t~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~ 269 (484)
..-. .....|..|+|||.+. +...+.++|||||||+||.|+.|..||..... .+..+.-.+
T Consensus 179 a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~---~GgSlaLAv 255 (302)
T KOG2345|consen 179 APIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQ---QGGSLALAV 255 (302)
T ss_pred cceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhh---cCCeEEEee
Confidence 4321 1234689999999986 34589999999999999999999998864321 222222111
Q ss_pred cc-cccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhh
Q 011519 270 DS-CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL 313 (484)
Q Consensus 270 ~~-~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~ 313 (484)
.. ...-.-....++.+.+||.+||+.||.+||++.+++.+++.+
T Consensus 256 ~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 256 QNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred eccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence 11 111111233788999999999999999999999999998765
|
|
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-43 Score=340.12 Aligned_cols=254 Identities=21% Similarity=0.286 Sum_probs=198.6
Q ss_pred CcccccccCCCCCCceEEEEEeCC-----------------CcEEEEEEecCCCCcc-HHHHHHHHHHHhcCCCCceeee
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLEN-----------------QFRIAVKRFNRSAWPD-ARQFLEEARAVGQLRNRRLANL 118 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~hpniv~l 118 (484)
.+|.+.++||+|+||.||+|...+ +..||||.+....... ...|.+|+.++.+++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 366778889999999999997432 3469999997653332 4579999999999999999999
Q ss_pred eeeeeeCCceEEEEecCCCCCHHhhhccCC-----------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCccccc
Q 011519 119 LGCCCEGDERLLVAEYMPNDTLAKHLFHWE-----------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHD 181 (484)
Q Consensus 119 ~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~-----------------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~D 181 (484)
++++...+..++||||+++|+|.+++.... ...+++..++.++.||+.||.|||+. |++|||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~-~ivH~d 163 (304)
T cd05096 85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL-NFVHRD 163 (304)
T ss_pred EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC-CccccC
Confidence 999999999999999999999999985321 12468889999999999999999998 999999
Q ss_pred ccccceeecCCCCceeeccCCccccCCC------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCC--CCCC
Q 011519 182 LNAYRIVFDDDVNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGK--HIPP 253 (484)
Q Consensus 182 lkp~Nill~~~~~~kl~DfG~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~--~p~~ 253 (484)
|||+|||++.++.+||+|||+++..... ....++..|+|||++.++.++.++||||||+++|||+++. .|+.
T Consensus 164 lkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~ 243 (304)
T cd05096 164 LATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYG 243 (304)
T ss_pred cchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCC
Confidence 9999999999999999999998765332 1234467899999998888999999999999999999754 4443
Q ss_pred chhhHHhhhccccccc--cccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 254 SHALDLIRDRNIQTLT--DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 254 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
................ ........+..++..+.+|+.+||+.||.+|||+.+|.+.|+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 244 ELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred cCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 3211111110000000 000111123455678999999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-44 Score=357.44 Aligned_cols=352 Identities=20% Similarity=0.238 Sum_probs=259.1
Q ss_pred ccCHHHHHHHhcCCCc------ccccccCCCCCCceEEEEEeCC----CcEEEEEEecCCCCcc-HHHHHHHHHHHhcCC
Q 011519 43 EYSIETLRTATSGFAM------ENIVSEHGEKAPNVVYKGKLEN----QFRIAVKRFNRSAWPD-ARQFLEEARAVGQLR 111 (484)
Q Consensus 43 ~~~~~~~~~~~~~f~~------~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~ 111 (484)
.+++++--++...|.. -.|-+.||.|.||.|++|+++. ...||||.++...... ..+|+.|+.+|.+++
T Consensus 609 P~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFd 688 (996)
T KOG0196|consen 609 PHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFD 688 (996)
T ss_pred CccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCC
Confidence 3566666666665543 2344567999999999999532 4679999998765443 567999999999999
Q ss_pred CCceeeeeeeeeeCCceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecC
Q 011519 112 NRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191 (484)
Q Consensus 112 hpniv~l~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~ 191 (484)
||||++|.|+......+.||+|||++|+|+.||+.++ +.|++.+...++++|+.|+.||-+. +.|||||...|||++.
T Consensus 689 HPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~D-GqftviQLVgMLrGIAsGMkYLsdm-~YVHRDLAARNILVNs 766 (996)
T KOG0196|consen 689 HPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQND-GQFTVIQLVGMLRGIASGMKYLSDM-NYVHRDLAARNILVNS 766 (996)
T ss_pred CCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcC-CceEeehHHHHHHHHHHHhHHHhhc-Cchhhhhhhhheeecc
Confidence 9999999999999999999999999999999998766 4599999999999999999999999 9999999999999999
Q ss_pred CCCceeeccCCccccCCCCc-cc----C--CCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhc
Q 011519 192 DVNPRLSCFGLMKNSRDGRS-YS----T--NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDR 263 (484)
Q Consensus 192 ~~~~kl~DfG~a~~~~~~~~-~~----~--t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~ 263 (484)
+...|++|||+++...+... .. | .+.|.|||.+...++|.+|||||||+||||.++ |..|++....+.+.
T Consensus 767 nLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVI-- 844 (996)
T KOG0196|consen 767 NLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI-- 844 (996)
T ss_pred ceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHH--
Confidence 99999999999998765431 11 1 267999999999999999999999999999766 77777654333222
Q ss_pred cccccccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhcCCCCCcccccCCCCCCCCCCCCCCCCcc
Q 011519 264 NIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPSHVLMGIPHGAAALPLSPLGDAC 343 (484)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 343 (484)
.-+....+-..|.+++..|.+|+..||++|-.+||.+.+|+.+|+++..++..-.......+.+..+....+ ..
T Consensus 845 ---kaIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP~SLk~~~~~~~r~s~~lld~~---~~ 918 (996)
T KOG0196|consen 845 ---KAIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNPNSLKTIAPESPRPSQPLLDRS---GS 918 (996)
T ss_pred ---HHHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCchhhcccCCCCCCCcccccCCC---CC
Confidence 222223334457889999999999999999999999999999999998876544333222222222222211 22
Q ss_pred cccchhHHHHHHHHhC---CcCchhhHhhhhhh--hHHHhhhhhHhHHHHH-hccCHHHHHHHHHHH
Q 011519 344 LRMDLTAIHEILEKLG---YKDDEGAATEMWTG--QMQETLNSKKKGDVAF-RHKDFRASIECYTQF 404 (484)
Q Consensus 344 ~~~~~~~~~e~l~~~~---y~~~~~~a~e~~~~--~~~~a~~~~~~g~~~~-~~~~~~~A~~~~~~a 404 (484)
......++.+||+.++ |++.+..+.=..-. .-..+.++...|..+. .+++.--.|..++.-
T Consensus 919 ~~~~f~sv~~WL~aIkm~rY~~~F~~ag~~s~~~V~q~s~eDl~~~Gitl~GhqkkIl~SIq~m~~q 985 (996)
T KOG0196|consen 919 DFTPFRSVGDWLEAIKMGRYKEHFAAAGYTSFEDVAQMSAEDLLRLGITLAGHQKKILSSIQAMRAQ 985 (996)
T ss_pred CCcccCCHHHHHHHhhhhHHHHHHHhcCcccHHHHHhhhHHHHHhhceeecchhHHHHHHHHHHHHH
Confidence 2233457778888877 77766554221111 1123445555565542 233333334444433
|
|
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-43 Score=333.17 Aligned_cols=250 Identities=19% Similarity=0.272 Sum_probs=203.5
Q ss_pred CcccccccCCCCCCceEEEEEe----CCCcEEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL----ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 131 (484)
..+++.+.||+|+||.||+|++ ..+..||+|.++..... ....|.+|+.++..++||||+++++++...+..++|
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 84 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIV 84 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEE
Confidence 4567788899999999999984 23678999999865332 245789999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCC-
Q 011519 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR- 210 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~- 210 (484)
|||+++|+|.+++... ...+++..++.++.||+.||.|||+. |++||||||+|||++.++.++++|||.+.......
T Consensus 85 ~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~i~~al~~lH~~-~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~ 162 (266)
T cd05064 85 TEYMSNGALDSFLRKH-EGQLVAGQLMGMLPGLASGMKYLSEM-GYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAI 162 (266)
T ss_pred EEeCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHC-CEeeccccHhhEEEcCCCcEEECCCcccccccccch
Confidence 9999999999999642 35689999999999999999999998 99999999999999999999999999876543221
Q ss_pred ----cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHHH
Q 011519 211 ----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 285 (484)
Q Consensus 211 ----~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 285 (484)
...++..|+|||.+.+..++.++|||||||++||+++ |..||............. .......+..++..+
T Consensus 163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 237 (266)
T cd05064 163 YTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVE-----DGFRLPAPRNCPNLL 237 (266)
T ss_pred hcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHH-----CCCCCCCCCCCCHHH
Confidence 2234578999999998899999999999999999775 888776432221111110 111112345567789
Q ss_pred HHHHHHHhccCCCCCCChHHHHHHHHhh
Q 011519 286 VRLASRCLQYEPRERPNPRSLVTALVTL 313 (484)
Q Consensus 286 ~~li~~cl~~dp~~Rps~~~il~~l~~~ 313 (484)
.+++.+||+.+|.+|||+.+|++.|..+
T Consensus 238 ~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 238 HQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred HHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 9999999999999999999999988654
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-43 Score=338.59 Aligned_cols=249 Identities=18% Similarity=0.223 Sum_probs=200.0
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCC--ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEec
Q 011519 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey 134 (484)
+|++++.||+|+||+||+|+. .+++.||||+++.... ...+.+.+|+.+++.++||||+++++++...+..++||||
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (287)
T cd07848 2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEY 81 (287)
T ss_pred CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEec
Confidence 577888899999999999995 4688999999875432 2245688999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-----
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----- 209 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~----- 209 (484)
+++++|..+.. ....+++..+..++.||+.||.|||+. +++||||||+||+++.++.+||+|||++......
T Consensus 82 ~~~~~l~~~~~--~~~~~~~~~~~~~~~qi~~~L~~lH~~-~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 158 (287)
T cd07848 82 VEKNMLELLEE--MPNGVPPEKVRSYIYQLIKAIHWCHKN-DIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANY 158 (287)
T ss_pred CCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEEcCCCcEEEeeccCcccccccccccc
Confidence 99877765543 345689999999999999999999998 9999999999999999999999999998875432
Q ss_pred CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhc--------------------cccccc
Q 011519 210 RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR--------------------NIQTLT 269 (484)
Q Consensus 210 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~--------------------~~~~~~ 269 (484)
....+|+.|+|||++.+..++.++|||||||++|||++|+.||+.......... ......
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (287)
T cd07848 159 TEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLR 238 (287)
T ss_pred cccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccc
Confidence 234678999999999988899999999999999999999988865321110000 000000
Q ss_pred ccccc------CCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 270 DSCLE------GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 270 ~~~~~------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
.+... .......+..+.+|+.+||+.||++|||++++++|
T Consensus 239 ~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h 284 (287)
T cd07848 239 FPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH 284 (287)
T ss_pred cCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 00000 01112356789999999999999999999999976
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-43 Score=330.61 Aligned_cols=250 Identities=22% Similarity=0.317 Sum_probs=208.3
Q ss_pred CCcccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecC
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~ 135 (484)
.++++++++||+|+||.||+|...++..||+|.+.... ...+.+.+|+.+++.++||||+++++.+...+..++||||+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYM 83 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecC
Confidence 35678899999999999999998788889999987543 23567999999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCC-----
Q 011519 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----- 210 (484)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~----- 210 (484)
++|+|.+++.......+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++.......
T Consensus 84 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~-~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~ 162 (261)
T cd05072 84 AKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK-NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTARE 162 (261)
T ss_pred CCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccccchhhEEecCCCcEEECCCccceecCCCceeccC
Confidence 999999999755556789999999999999999999998 99999999999999999999999999998765422
Q ss_pred cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHH
Q 011519 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289 (484)
Q Consensus 211 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 289 (484)
...++..|+|||++.+..++.++|||||||++|+|+| |..||................ ........+.++.+++
T Consensus 163 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~li 237 (261)
T cd05072 163 GAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGY-----RMPRMENCPDELYDIM 237 (261)
T ss_pred CCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCC-----CCCCCCCCCHHHHHHH
Confidence 2234567999999988889999999999999999998 887776543222211111111 1112234567899999
Q ss_pred HHHhccCCCCCCChHHHHHHHHh
Q 011519 290 SRCLQYEPRERPNPRSLVTALVT 312 (484)
Q Consensus 290 ~~cl~~dp~~Rps~~~il~~l~~ 312 (484)
.+||..+|++|||+.++.+.|+.
T Consensus 238 ~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 238 KTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred HHHccCCcccCcCHHHHHHHHhc
Confidence 99999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-43 Score=350.92 Aligned_cols=248 Identities=17% Similarity=0.172 Sum_probs=199.5
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCC---ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEe
Q 011519 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 133 (484)
.|.+++.||+|+||+||+|. ..+++.||||++..... .....+.+|+.++..++||||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 46788899999999999999 56789999999975432 224568899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC-----
Q 011519 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----- 208 (484)
Q Consensus 134 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~----- 208 (484)
|++||+|.+++. ..+.+++..+..++.||+.||.|||+. ||+||||||+|||++.++++||+|||++.....
T Consensus 82 ~~~gg~L~~~l~--~~~~~~e~~~~~~~~qi~~aL~~LH~~-givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~ 158 (381)
T cd05626 82 YIPGGDMMSLLI--RMEVFPEVLARFYIAELTLAIESVHKM-GFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSK 158 (381)
T ss_pred cCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhC-CeeecCCcHHHEEECCCCCEEEeeCcCCcccccccccc
Confidence 999999999996 345689999999999999999999998 999999999999999999999999998753210
Q ss_pred ----------------------------------------------CCcccCCCCCCCcccccCCCCCCCCceeehHHHH
Q 011519 209 ----------------------------------------------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLL 242 (484)
Q Consensus 209 ----------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l 242 (484)
.....||+.|+|||++.+..++.++|||||||++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il 238 (381)
T cd05626 159 YYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVIL 238 (381)
T ss_pred cccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHH
Confidence 0134689999999999988899999999999999
Q ss_pred HHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHH--HhccCCCCCCChHHHHHHH
Q 011519 243 LDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR--CLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 243 ~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~--cl~~dp~~Rps~~~il~~l 310 (484)
|||+||..||.............. . ............++++.+|+.+ |+..+|..||++.+++.|-
T Consensus 239 ~elltG~~Pf~~~~~~~~~~~i~~-~-~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp 306 (381)
T cd05626 239 FEMLVGQPPFLAPTPTETQLKVIN-W-ENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHP 306 (381)
T ss_pred HHHHhCCCCCcCCCHHHHHHHHHc-c-ccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCc
Confidence 999999998865432221111110 0 0001111112356789999988 4556666799999999984
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-43 Score=348.20 Aligned_cols=250 Identities=17% Similarity=0.173 Sum_probs=200.0
Q ss_pred CCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEE
Q 011519 55 GFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (484)
Q Consensus 55 ~f~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 132 (484)
.+.++++++.||+|+||+||+|+ ..+++.||||++...... ....+.+|+.+++.++|+||+++++++...+..++||
T Consensus 72 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 151 (353)
T PLN00034 72 SLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLL 151 (353)
T ss_pred CHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEE
Confidence 46677888999999999999999 457899999999654322 2457899999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC---
Q 011519 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--- 209 (484)
Q Consensus 133 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~--- 209 (484)
||+++|+|.+.. ..++..+..++.||+.||.|||+. |++||||||+|||++.++.+||+|||+++.....
T Consensus 152 e~~~~~~L~~~~------~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~ 224 (353)
T PLN00034 152 EFMDGGSLEGTH------IADEQFLADVARQILSGIAYLHRR-HIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDP 224 (353)
T ss_pred ecCCCCcccccc------cCCHHHHHHHHHHHHHHHHHHHHC-CEeecCCCHHHEEEcCCCCEEEcccccceeccccccc
Confidence 999999987543 356788899999999999999998 9999999999999999999999999998865432
Q ss_pred -CcccCCCCCCCcccccC-----CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHH
Q 011519 210 -RSYSTNLAFTPPEYLRT-----GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283 (484)
Q Consensus 210 -~~~~~t~~y~aPE~~~~-----~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (484)
....||..|+|||++.. ...+.++|||||||++|||++|+.||.......+.... .... .......+...+.
T Consensus 225 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~ 302 (353)
T PLN00034 225 CNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLM-CAIC-MSQPPEAPATASR 302 (353)
T ss_pred ccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHH-HHHh-ccCCCCCCCccCH
Confidence 34578999999998753 22456899999999999999999988632111110000 0000 0011123345678
Q ss_pred HHHHHHHHHhccCCCCCCChHHHHHHHHhh
Q 011519 284 ELVRLASRCLQYEPRERPNPRSLVTALVTL 313 (484)
Q Consensus 284 ~l~~li~~cl~~dp~~Rps~~~il~~l~~~ 313 (484)
++.+||.+||+.||++|||+.++++|-+-.
T Consensus 303 ~l~~li~~~l~~~P~~Rpt~~ell~hp~~~ 332 (353)
T PLN00034 303 EFRHFISCCLQREPAKRWSAMQLLQHPFIL 332 (353)
T ss_pred HHHHHHHHHccCChhhCcCHHHHhcCcccc
Confidence 899999999999999999999999985433
|
|
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-43 Score=343.35 Aligned_cols=253 Identities=19% Similarity=0.269 Sum_probs=203.5
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEec
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey 134 (484)
.+|++++.||.|+||.||++.. .++..+|+|++...... ....+.+|+++++.++||||+++++++...+..++||||
T Consensus 5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 84 (333)
T cd06650 5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 84 (333)
T ss_pred hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEec
Confidence 4678889999999999999995 46888999998764322 245689999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC--Ccc
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSY 212 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~--~~~ 212 (484)
+++|+|.+++. ..+.+++..+..++.|++.||.|||+..+++|+||||+|||++.++.+||+|||++...... ...
T Consensus 85 ~~~~~L~~~l~--~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~ 162 (333)
T cd06650 85 MDGGSLDQVLK--KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 162 (333)
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhccccC
Confidence 99999999996 34568999999999999999999998547999999999999999999999999998765332 345
Q ss_pred cCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhc---ccc-----------------------
Q 011519 213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR---NIQ----------------------- 266 (484)
Q Consensus 213 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~---~~~----------------------- 266 (484)
.+|+.|+|||++.+..++.++|||||||++|+|++|+.||........... ...
T Consensus 163 ~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (333)
T cd06650 163 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYG 242 (333)
T ss_pred CCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhc
Confidence 688999999999988899999999999999999999998764322111000 000
Q ss_pred ----------ccccccc---cCCCC-hHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 267 ----------TLTDSCL---EGQFS-SDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 267 ----------~~~~~~~---~~~~~-~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
.+..... ....+ ...+.++.+|+.+||+.||++|||+.+++.|-+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~ 301 (333)
T cd06650 243 PDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAF 301 (333)
T ss_pred ccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHH
Confidence 0000000 00011 124578999999999999999999999998844
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-43 Score=360.13 Aligned_cols=248 Identities=18% Similarity=0.194 Sum_probs=205.7
Q ss_pred CCcccccccCCCCCCceEEEEEe-CC-CcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEe
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKL-EN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~-~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 133 (484)
+..|.+.+.||+|+||.||+|.. .+ +..||+|.+..........+.+|+.+|+.++|||||++++++...+..+||||
T Consensus 66 ~~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E 145 (478)
T PTZ00267 66 EHMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIME 145 (478)
T ss_pred ceeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEE
Confidence 34578888999999999999983 34 67899998765544445567889999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC--
Q 011519 134 YMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 209 (484)
Q Consensus 134 y~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~-- 209 (484)
|++||+|.++|... ...++++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 146 ~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~-~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~ 224 (478)
T PTZ00267 146 YGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR-KMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS 224 (478)
T ss_pred CCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC-CEEECCcCHHhEEECCCCcEEEEeCcCceecCCccc
Confidence 99999999988532 345689999999999999999999998 9999999999999999999999999999865432
Q ss_pred ----CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHH
Q 011519 210 ----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 285 (484)
Q Consensus 210 ----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 285 (484)
....||+.|+|||++.+..++.++|||||||++|+|+||+.||................. ..++..++..+
T Consensus 225 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~-----~~~~~~~s~~~ 299 (478)
T PTZ00267 225 LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKY-----DPFPCPVSSGM 299 (478)
T ss_pred cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC-----CCCCccCCHHH
Confidence 345689999999999988899999999999999999999998865432222211111111 12334566789
Q ss_pred HHHHHHHhccCCCCCCChHHHHHH
Q 011519 286 VRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 286 ~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
.+|+.+||..||++|||+.+++.+
T Consensus 300 ~~li~~~L~~dP~~Rps~~~~l~~ 323 (478)
T PTZ00267 300 KALLDPLLSKNPALRPTTQQLLHT 323 (478)
T ss_pred HHHHHHHhccChhhCcCHHHHHhC
Confidence 999999999999999999999865
|
|
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-43 Score=337.48 Aligned_cols=251 Identities=17% Similarity=0.237 Sum_probs=200.3
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEe
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 133 (484)
...|.+++.||.|+||+||+|.. .++..||+|.++..... ....+.+|+.+++.++||||+++++++...+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFE 83 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEe
Confidence 45788899999999999999994 57889999999754322 24567899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----
Q 011519 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 209 (484)
Q Consensus 134 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~---- 209 (484)
|+++ +|.+++.. .+..+++..+..++.||+.||.|||+. ||+||||||+|||++.++.+||+|||+++.....
T Consensus 84 ~~~~-~l~~~l~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~~ 160 (288)
T cd07871 84 YLDS-DLKQYLDN-CGNLMSMHNVKIFMFQLLRGLSYCHKR-KILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTY 160 (288)
T ss_pred CCCc-CHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEECCCCCEEECcCcceeeccCCCccc
Confidence 9975 89998864 334588999999999999999999998 9999999999999999999999999998764322
Q ss_pred CcccCCCCCCCcccccC-CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccc--------------------ccc
Q 011519 210 RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI--------------------QTL 268 (484)
Q Consensus 210 ~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~--------------------~~~ 268 (484)
....+++.|+|||++.+ ..++.++|||||||++|+|+||+.||............. ...
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (288)
T cd07871 161 SNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSY 240 (288)
T ss_pred cCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhcc
Confidence 23467889999999875 458999999999999999999998886543221110000 000
Q ss_pred ccccccC----CCChHHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 269 TDSCLEG----QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 269 ~~~~~~~----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
.-+.... ......+.++.+|+.+||..||.+|||++++++|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h 285 (288)
T cd07871 241 LFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRH 285 (288)
T ss_pred ccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0000000 0112346789999999999999999999999976
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-43 Score=334.35 Aligned_cols=250 Identities=24% Similarity=0.379 Sum_probs=205.1
Q ss_pred CcccccccCCCCCCceEEEEEeCC-C-----cEEEEEEecCCCCcc-HHHHHHHHHHHhcCCCCceeeeeeeeeeCCceE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLEN-Q-----FRIAVKRFNRSAWPD-ARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~~-~-----~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 129 (484)
.++++++.||+|+||.||+|.... + ..||+|.++...... ...|.+|+.++..++||||+++++++...+..+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence 466788999999999999998432 2 579999987554322 456899999999999999999999999989999
Q ss_pred EEEecCCCCCHHhhhccCCC--------------CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCc
Q 011519 130 LVAEYMPNDTLAKHLFHWET--------------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNP 195 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~ 195 (484)
++|||+++|+|.+++..... ..+++..++.++.|++.||.|||+. |++|+||||+||++++++.+
T Consensus 85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~-~i~H~dlkp~Nil~~~~~~~ 163 (283)
T cd05048 85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH-HFVHRDLAARNCLVGEGLTV 163 (283)
T ss_pred EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccccccceEEEcCCCcE
Confidence 99999999999999964321 4588999999999999999999999 99999999999999999999
Q ss_pred eeeccCCccccCCC------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhcccccc
Q 011519 196 RLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTL 268 (484)
Q Consensus 196 kl~DfG~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~ 268 (484)
+|+|||++...... ....+++.|+|||.+.+..++.++|||||||++|||++ |..||............
T Consensus 164 ~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i---- 239 (283)
T cd05048 164 KISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMI---- 239 (283)
T ss_pred EECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH----
Confidence 99999998764322 23345678999999988889999999999999999998 88887643322221111
Q ss_pred ccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHh
Q 011519 269 TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVT 312 (484)
Q Consensus 269 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~ 312 (484)
........+..++.++.+|+.+||+.||.+||++.+|+++|+.
T Consensus 240 -~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 240 -RSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred -HcCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 1111122345667899999999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-43 Score=341.57 Aligned_cols=239 Identities=18% Similarity=0.240 Sum_probs=198.6
Q ss_pred ccCCCCCCceEEEEEe----CCCcEEEEEEecCCCC----ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEec
Q 011519 63 SEHGEKAPNVVYKGKL----ENQFRIAVKRFNRSAW----PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (484)
Q Consensus 63 ~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey 134 (484)
+.||+|+||.||+++. .+++.||||+++.... .....+.+|+.+|+.++||||+++++++...+..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 5679999999999984 3578999999875321 2234578899999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC----CC
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GR 210 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~----~~ 210 (484)
+++|+|.+++. ..+.+++..+..++.||+.||.|||+. ||+||||||+|||++.++.+||+|||+++.... ..
T Consensus 82 ~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 158 (323)
T cd05584 82 LSGGELFMHLE--REGIFMEDTACFYLSEISLALEHLHQQ-GIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTH 158 (323)
T ss_pred CCCchHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCccc
Confidence 99999999996 345688999999999999999999999 999999999999999999999999999875322 12
Q ss_pred cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHH
Q 011519 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (484)
Q Consensus 211 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (484)
...||+.|+|||++.+..++.++|||||||++|||++|+.||.............. . ...++...++.+.+|+.
T Consensus 159 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~----~--~~~~~~~~~~~~~~li~ 232 (323)
T cd05584 159 TFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILK----G--KLNLPPYLTPEARDLLK 232 (323)
T ss_pred ccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHc----C--CCCCCCCCCHHHHHHHH
Confidence 35689999999999988899999999999999999999998865432221111111 1 11234556788999999
Q ss_pred HHhccCCCCCC-----ChHHHHHHH
Q 011519 291 RCLQYEPRERP-----NPRSLVTAL 310 (484)
Q Consensus 291 ~cl~~dp~~Rp-----s~~~il~~l 310 (484)
+||+.||++|| ++.++++|-
T Consensus 233 ~~l~~~p~~R~~~~~~~~~~l~~h~ 257 (323)
T cd05584 233 KLLKRNPSSRLGAGPGDAAEVQSHP 257 (323)
T ss_pred HHcccCHhHcCCCCCCCHHHHhcCC
Confidence 99999999999 899988874
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-43 Score=345.35 Aligned_cols=238 Identities=19% Similarity=0.238 Sum_probs=199.1
Q ss_pred cCCCCCCceEEEEE-eCCCcEEEEEEecCCCC---ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCCCCC
Q 011519 64 EHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT 139 (484)
Q Consensus 64 ~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~~gs 139 (484)
.||+|+||+||++. ..+++.||+|+++.... .....+..|+.++..++||||+++++++...+..++||||+++|+
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~ 81 (325)
T cd05594 2 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGE 81 (325)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCCc
Confidence 46999999999999 46789999999975321 234567889999999999999999999999999999999999999
Q ss_pred HHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhc-CCCcccccccccceeecCCCCceeeccCCccccCC----CCcccC
Q 011519 140 LAKHLFHWETQPMKWAMRLRVALHIAEALEYCTS-KERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYST 214 (484)
Q Consensus 140 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~-~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~----~~~~~~ 214 (484)
|..++. ..+.+++..+..++.||+.||.|||+ . ||+||||||+|||++.++.+||+|||+++.... .....|
T Consensus 82 L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~lH~~~-~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g 158 (325)
T cd05594 82 LFFHLS--RERVFSEDRARFYGAEIVSALDYLHSEK-NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCG 158 (325)
T ss_pred HHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhcC-CEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccccccC
Confidence 999886 44578999999999999999999997 6 999999999999999999999999999875322 124568
Q ss_pred CCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHHhc
Q 011519 215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ 294 (484)
Q Consensus 215 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 294 (484)
|+.|+|||++.+..++.++|||||||++|+|+||..||............... ...++...++++.+|+.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~li~~~L~ 232 (325)
T cd05594 159 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME------EIRFPRTLSPEAKSLLSGLLK 232 (325)
T ss_pred CcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcC------CCCCCCCCCHHHHHHHHHHhh
Confidence 99999999999888999999999999999999999988654332221111111 112345567889999999999
Q ss_pred cCCCCCC-----ChHHHHHHH
Q 011519 295 YEPRERP-----NPRSLVTAL 310 (484)
Q Consensus 295 ~dp~~Rp-----s~~~il~~l 310 (484)
.||++|+ ++.++++|.
T Consensus 233 ~dP~~R~~~~~~~~~~il~h~ 253 (325)
T cd05594 233 KDPKQRLGGGPDDAKEIMQHK 253 (325)
T ss_pred cCHHHhCCCCCCCHHHHhcCC
Confidence 9999996 899999884
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-43 Score=336.70 Aligned_cols=249 Identities=18% Similarity=0.209 Sum_probs=204.5
Q ss_pred ccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCc---cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEec
Q 011519 59 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (484)
Q Consensus 59 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey 134 (484)
|++++.||+|+||+||++. ..+++.||||++...... ....+.+|+.+++.++||||+++++.+..++..++||||
T Consensus 2 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05605 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEec
Confidence 4567778999999999999 457899999999754322 234578899999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC---Cc
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---RS 211 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~---~~ 211 (484)
+++|+|.+++.......+++..+..++.|++.||.|||+. +++||||||+||++++++.++|+|||++...... ..
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 160 (285)
T cd05605 82 MNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRE-RIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGETIRG 160 (285)
T ss_pred cCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHC-CcEecCCCHHHEEECCCCCEEEeeCCCceecCCCCcccc
Confidence 9999999988654445699999999999999999999998 9999999999999999999999999998875433 23
Q ss_pred ccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHH
Q 011519 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291 (484)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 291 (484)
..|++.|+|||++.+..++.++|||||||++|+|++|..||...............+.. ....++...+..+.+|+.+
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~ 238 (285)
T cd05605 161 RVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKE--DQEEYSEKFSEAARSICRQ 238 (285)
T ss_pred ccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhh--cccccCcccCHHHHHHHHH
Confidence 46789999999999888999999999999999999999988654322111111111111 1122345567889999999
Q ss_pred HhccCCCCCC-----ChHHHHHHH
Q 011519 292 CLQYEPRERP-----NPRSLVTAL 310 (484)
Q Consensus 292 cl~~dp~~Rp-----s~~~il~~l 310 (484)
||..||++|| ++.+++++-
T Consensus 239 ~l~~~P~~R~~~~~~~~~~l~~~~ 262 (285)
T cd05605 239 LLTKDPGFRLGCRGEGAEEVKAHP 262 (285)
T ss_pred HccCCHHHhcCCCCCCHHHHhcCc
Confidence 9999999999 888998873
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-43 Score=350.16 Aligned_cols=247 Identities=15% Similarity=0.136 Sum_probs=200.5
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCC---ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEe
Q 011519 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 133 (484)
+|++++.||.|+||+||+|.. .+++.||||++..... .....+.+|+.++..++||||+++++++.+++..+||||
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (364)
T cd05599 2 DFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIME 81 (364)
T ss_pred CceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEEC
Confidence 567788899999999999994 5789999999975321 224567889999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----
Q 011519 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 209 (484)
Q Consensus 134 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~---- 209 (484)
|+++|+|.+++. ..+.+++..+..++.||+.||.|||+. ||+||||||+|||++.++.+||+|||++......
T Consensus 82 ~~~~g~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~lH~~-~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~ 158 (364)
T cd05599 82 YLPGGDMMTLLM--KKDTFTEEETRFYIAETILAIDSIHKL-GYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTE 158 (364)
T ss_pred CCCCcHHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeccCCHHHeEECCCCCEEEeecccceecccccccc
Confidence 999999999996 345699999999999999999999999 9999999999999999999999999998653211
Q ss_pred --------------------------------------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCC
Q 011519 210 --------------------------------------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHI 251 (484)
Q Consensus 210 --------------------------------------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p 251 (484)
....||+.|+|||++.+..++.++|||||||++|||++|..|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~P 238 (364)
T cd05599 159 FYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPP 238 (364)
T ss_pred ccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCC
Confidence 123589999999999988899999999999999999999998
Q ss_pred CCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHHhccCCCCCCC---hHHHHHHH
Q 011519 252 PPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPN---PRSLVTAL 310 (484)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps---~~~il~~l 310 (484)
|.............. .... .........++.+.+|+.+|+. +|.+|++ +.+++.|-
T Consensus 239 f~~~~~~~~~~~i~~-~~~~-~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~ 297 (364)
T cd05599 239 FCSDNPQETYRKIIN-WKET-LQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHP 297 (364)
T ss_pred CCCCCHHHHHHHHHc-CCCc-cCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCC
Confidence 865432211111110 0000 0000112346789999999996 9999997 99998874
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-45 Score=317.08 Aligned_cols=252 Identities=19% Similarity=0.218 Sum_probs=214.6
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCC--ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEec
Q 011519 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey 134 (484)
.|.+-+.||+|.|+.||++. ..+|+.+|+|+++.... .+.+.+.+|+.+.+.|+|||||++.+.+.+....|||+|+
T Consensus 12 ~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe~ 91 (355)
T KOG0033|consen 12 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDL 91 (355)
T ss_pred hhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEec
Confidence 46666778999999999998 67899999999865432 3567889999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCC---CCceeeccCCccccCCCC-
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD---VNPRLSCFGLMKNSRDGR- 210 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~---~~~kl~DfG~a~~~~~~~- 210 (484)
|.|++|..-|-. +..+++..+-.++.||+++|.|+|.+ +|||||+||+|+|+-+. --+||+|||++.....+.
T Consensus 92 m~G~dl~~eIV~--R~~ySEa~aSH~~rQiLeal~yCH~n-~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~ 168 (355)
T KOG0033|consen 92 VTGGELFEDIVA--REFYSEADASHCIQQILEALAYCHSN-GIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEA 168 (355)
T ss_pred ccchHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhc-CceeccCChhheeeeeccCCCceeecccceEEEeCCccc
Confidence 999999887753 24578999999999999999999999 99999999999999533 348999999999887554
Q ss_pred --cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHH
Q 011519 211 --SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288 (484)
Q Consensus 211 --~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 288 (484)
...|||+|||||++...+|+..+|||+.||+||-|+.|.+||+++....+.++....-.+- .+...+.++++..+|
T Consensus 169 ~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~--~~~~w~~is~~Ak~L 246 (355)
T KOG0033|consen 169 WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDY--PSPEWDTVTPEAKSL 246 (355)
T ss_pred cccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCC--CCcccCcCCHHHHHH
Confidence 4578999999999999999999999999999999999999999876666655555444332 222345678899999
Q ss_pred HHHHhccCCCCCCChHHHHHHHHhhh
Q 011519 289 ASRCLQYEPRERPNPRSLVTALVTLQ 314 (484)
Q Consensus 289 i~~cl~~dp~~Rps~~~il~~l~~~~ 314 (484)
+.+||..||.+|.|+.|.++|-|--.
T Consensus 247 vrrML~~dP~kRIta~EAL~HpWi~~ 272 (355)
T KOG0033|consen 247 IRRMLTVNPKKRITADEALKHPWICN 272 (355)
T ss_pred HHHHhccChhhhccHHHHhCCchhcc
Confidence 99999999999999999999966443
|
|
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-43 Score=348.49 Aligned_cols=248 Identities=20% Similarity=0.206 Sum_probs=204.5
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCC---ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEe
Q 011519 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 133 (484)
+|.+++.||+|+||+||+|.. .+++.||||+++.... .....+..|+.++..++||||+++++++.+.+..++|||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (350)
T cd05573 2 DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVME 81 (350)
T ss_pred CceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEc
Confidence 577888999999999999994 5789999999975321 234568899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCC---
Q 011519 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR--- 210 (484)
Q Consensus 134 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~--- 210 (484)
|+++|+|.+++.. .+.+++..+..++.||+.||.|||+. |++||||||+|||++.++.+||+|||++.......
T Consensus 82 ~~~~~~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~-giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~ 158 (350)
T cd05573 82 YMPGGDLMNLLIR--KDVFPEETARFYIAELVLALDSVHKL-GFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDRE 158 (350)
T ss_pred CCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHeEECCCCCEEeecCCCCccCcccCccc
Confidence 9999999999974 36799999999999999999999998 99999999999999999999999999987654322
Q ss_pred ------------------------------cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHh
Q 011519 211 ------------------------------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLI 260 (484)
Q Consensus 211 ------------------------------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~ 260 (484)
...||+.|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~ 238 (350)
T cd05573 159 YYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQET 238 (350)
T ss_pred ccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHHH
Confidence 34688999999999999999999999999999999999998865432221
Q ss_pred hhccccccccccccCCCChHHHHHHHHHHHHHhccCCCCCCC-hHHHHHHHH
Q 011519 261 RDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPN-PRSLVTALV 311 (484)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps-~~~il~~l~ 311 (484)
...... .... .........++++.+||.+||. ||.+||+ +.+++.|.+
T Consensus 239 ~~~i~~-~~~~-~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~ 287 (350)
T cd05573 239 YNKIIN-WKES-LRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPF 287 (350)
T ss_pred HHHHhc-cCCc-ccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCC
Confidence 111111 0000 0101112257889999999997 9999999 999999843
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-42 Score=327.20 Aligned_cols=247 Identities=22% Similarity=0.330 Sum_probs=202.4
Q ss_pred CCcccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecC
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~ 135 (484)
.+++++++.||+|+||.||++.+.++..+|+|.+.... ....+|.+|+.++++++||||+++++++...+..++||||+
T Consensus 3 ~~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~ 81 (256)
T cd05114 3 PSELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFM 81 (256)
T ss_pred HHHcEEeeEecCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcC
Confidence 34677888999999999999998777889999987543 23567899999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCC-----
Q 011519 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----- 210 (484)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~----- 210 (484)
++|+|.+++... ...+++..+..++.|++.||.|||+. |++|+||||+||++++++.+||+|||++.......
T Consensus 82 ~~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~ 159 (256)
T cd05114 82 ENGCLLNYLRQR-QGKLSKDMLLSMCQDVCEGMEYLERN-SFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSS 159 (256)
T ss_pred CCCcHHHHHHhC-ccCCCHHHHHHHHHHHHHHHHHHHHC-CccccccCcceEEEcCCCeEEECCCCCccccCCCceeccC
Confidence 999999998642 34689999999999999999999998 99999999999999999999999999987653321
Q ss_pred cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHH
Q 011519 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289 (484)
Q Consensus 211 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 289 (484)
...++..|+|||++.+..++.++||||||+++|+|++ |+.|+................ ....+...+..+.+++
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~-----~~~~~~~~~~~~~~li 234 (256)
T cd05114 160 GAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGF-----RLYRPKLASMTVYEVM 234 (256)
T ss_pred CCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC-----CCCCCCCCCHHHHHHH
Confidence 2234567999999988889999999999999999999 777765432221111111110 1112233457899999
Q ss_pred HHHhccCCCCCCChHHHHHHH
Q 011519 290 SRCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 290 ~~cl~~dp~~Rps~~~il~~l 310 (484)
.+||+.+|++|||+.++++.|
T Consensus 235 ~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 235 YSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred HHHccCCcccCcCHHHHHHhh
Confidence 999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-43 Score=324.05 Aligned_cols=250 Identities=18% Similarity=0.194 Sum_probs=211.5
Q ss_pred CCCcccccccCCCCCCceEEEEEeC-CCcEEEEEEecCCCCc---cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEE
Q 011519 55 GFAMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (484)
Q Consensus 55 ~f~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 130 (484)
+++.+++++.||.|.-|+||++..+ ++..+|+|++.+.... ...+...|-+||+.++||.++.|+..|......++
T Consensus 75 ~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl 154 (459)
T KOG0610|consen 75 GLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCL 154 (459)
T ss_pred CHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEE
Confidence 5667889999999999999999954 5689999999876543 34567889999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccC---
Q 011519 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR--- 207 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~--- 207 (484)
|||||+||+|...+++..++.+++..+..++.+|+-||+|||.. |||+|||||+||||-++|++.|+||.|+....
T Consensus 155 ~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHml-GivYRDLKPENILvredGHIMLsDFDLS~~~~~~P 233 (459)
T KOG0610|consen 155 VMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHML-GIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSP 233 (459)
T ss_pred EEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhh-ceeeccCCcceeEEecCCcEEeeeccccccCCCCC
Confidence 99999999999999887788899999999999999999999999 99999999999999999999999999853210
Q ss_pred ---------------------------------C------------------------CCcccCCCCCCCcccccCCCCC
Q 011519 208 ---------------------------------D------------------------GRSYSTNLAFTPPEYLRTGRVT 230 (484)
Q Consensus 208 ---------------------------------~------------------------~~~~~~t~~y~aPE~~~~~~~~ 230 (484)
. +.+.+||-.|.|||++.|...+
T Consensus 234 t~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHg 313 (459)
T KOG0610|consen 234 TLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHG 313 (459)
T ss_pred eeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCC
Confidence 0 0134578899999999999999
Q ss_pred CCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHHhccCCCCCCC----hHHH
Q 011519 231 PESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPN----PRSL 306 (484)
Q Consensus 231 ~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps----~~~i 306 (484)
.+.|.|+|||++|||+.|..||.+........ .+....+.-.-.+..+..+.+||+++|.+||.+|.. +.||
T Consensus 314 sAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~----NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eI 389 (459)
T KOG0610|consen 314 SAVDWWTFGIFLYEMLYGTTPFKGSNNKETLR----NIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEI 389 (459)
T ss_pred chhhHHHHHHHHHHHHhCCCCcCCCCchhhHH----HHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhccccchHHh
Confidence 99999999999999999999998764433322 222222221122356789999999999999999987 8888
Q ss_pred HHH
Q 011519 307 VTA 309 (484)
Q Consensus 307 l~~ 309 (484)
-+|
T Consensus 390 K~H 392 (459)
T KOG0610|consen 390 KRH 392 (459)
T ss_pred hcC
Confidence 887
|
|
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-42 Score=328.53 Aligned_cols=250 Identities=22% Similarity=0.339 Sum_probs=208.0
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecC
Q 011519 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~ 135 (484)
.++.+.+.||.|+||.||+|. .++++.||+|++.... .....+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 84 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc-hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence 356677888999999999999 4568899999987543 34567999999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCC-----
Q 011519 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----- 210 (484)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~----- 210 (484)
++++|.+++.......+++..++.++.|++.||.|||+. |++||||||+||++++++.+||+|||++.......
T Consensus 85 ~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~-~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~~ 163 (263)
T cd05052 85 TYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 163 (263)
T ss_pred CCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CEeecccCcceEEEcCCCcEEeCCCccccccccceeeccC
Confidence 999999999754556689999999999999999999998 99999999999999999999999999988755432
Q ss_pred cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHH
Q 011519 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289 (484)
Q Consensus 211 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 289 (484)
...+++.|+|||.+.+..++.++|||||||++|||++ |..|++............ .......+...+..+.+++
T Consensus 164 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~li 238 (263)
T cd05052 164 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-----KGYRMERPEGCPPKVYELM 238 (263)
T ss_pred CCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH-----CCCCCCCCCCCCHHHHHHH
Confidence 1223567999999998889999999999999999998 887776543322211111 1112234455678899999
Q ss_pred HHHhccCCCCCCChHHHHHHHHhh
Q 011519 290 SRCLQYEPRERPNPRSLVTALVTL 313 (484)
Q Consensus 290 ~~cl~~dp~~Rps~~~il~~l~~~ 313 (484)
.+||+.||++|||+.++++.|+.+
T Consensus 239 ~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 239 RACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred HHHccCCcccCCCHHHHHHHHHhh
Confidence 999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-43 Score=337.96 Aligned_cols=251 Identities=18% Similarity=0.196 Sum_probs=197.3
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEec
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey 134 (484)
++|++++.||.|+||+||+|.. .+++.||||+++..... ....+.+|+.+++.++||||+++++++......++||||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (303)
T cd07869 5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEY 84 (303)
T ss_pred ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEEC
Confidence 4678889999999999999995 47889999999754322 234678999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----C
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----R 210 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~----~ 210 (484)
++ ++|.+++.. ..+.+++..+..++.||+.||.|||+. ||+||||||+|||+++++.+||+|||++...... .
T Consensus 85 ~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 161 (303)
T cd07869 85 VH-TDLCQYMDK-HPGGLHPENVKLFLFQLLRGLSYIHQR-YILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYS 161 (303)
T ss_pred CC-cCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEECCCCCEEECCCCcceeccCCCccCC
Confidence 95 588888864 335689999999999999999999999 9999999999999999999999999998754321 3
Q ss_pred cccCCCCCCCcccccCC-CCCCCCceeehHHHHHHHhhCCCCCCchhh--HHhhh------ccc----------cccccc
Q 011519 211 SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHAL--DLIRD------RNI----------QTLTDS 271 (484)
Q Consensus 211 ~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~--~~~~~------~~~----------~~~~~~ 271 (484)
...+|+.|+|||++.+. .++.++|||||||++|+|++|..||..... ..... ... ......
T Consensus 162 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (303)
T cd07869 162 NEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPE 241 (303)
T ss_pred CCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccc
Confidence 35678999999998754 478899999999999999999998864311 00000 000 000000
Q ss_pred cccCCCC---------hHHHHHHHHHHHHHhccCCCCCCChHHHHHHH
Q 011519 272 CLEGQFS---------SDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 272 ~~~~~~~---------~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 310 (484)
......+ ...+..+.+|+.+||+.||.+|||+.++++|-
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~ 289 (303)
T cd07869 242 RFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHE 289 (303)
T ss_pred cccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCc
Confidence 0000000 01235788999999999999999999999873
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-43 Score=347.50 Aligned_cols=247 Identities=12% Similarity=0.085 Sum_probs=196.9
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCC---ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEe
Q 011519 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 133 (484)
+|++++.||+|+||+||+|. ..+++.||||++..... .....+.+|+.++..++||||+++++.+.+....+||||
T Consensus 2 ~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E 81 (363)
T cd05628 2 DFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIME 81 (363)
T ss_pred CceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEc
Confidence 46778889999999999998 45689999999975321 123567889999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----
Q 011519 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 209 (484)
Q Consensus 134 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~---- 209 (484)
|++||+|.+++. ..+.+++..+..++.||+.||.|||+. ||+||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~lH~~-givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~ 158 (363)
T cd05628 82 FLPGGDMMTLLM--KKDTLTEEETQFYIAETVLAIDSIHQL-GFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTE 158 (363)
T ss_pred CCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhC-CeEecCCCHHHeEECCCCCEEEeeccCccccccccccc
Confidence 999999999996 345799999999999999999999999 9999999999999999999999999998753211
Q ss_pred -----------------------------------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCc
Q 011519 210 -----------------------------------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPS 254 (484)
Q Consensus 210 -----------------------------------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~ 254 (484)
....||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~ 238 (363)
T cd05628 159 FYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS 238 (363)
T ss_pred ccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCC
Confidence 134689999999999988899999999999999999999999875
Q ss_pred hhhHHhhhccccccccccccCCCChHHHHHHHHHHHHHhc--cCCCCCCChHHHHHH
Q 011519 255 HALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ--YEPRERPNPRSLVTA 309 (484)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~--~dp~~Rps~~~il~~ 309 (484)
..................... ....++++.+++.+++. .++..||++.+|++|
T Consensus 239 ~~~~~~~~~i~~~~~~~~~p~--~~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~h 293 (363)
T cd05628 239 ETPQETYKKVMNWKETLIFPP--EVPISEKAKDLILRFCCEWEHRIGAPGVEEIKTN 293 (363)
T ss_pred CCHHHHHHHHHcCcCcccCCC--cCCCCHHHHHHHHHHcCChhhcCCCCCHHHHhCC
Confidence 432222111111000000000 11245788888888654 233346899999988
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-42 Score=329.16 Aligned_cols=249 Identities=22% Similarity=0.366 Sum_probs=210.0
Q ss_pred cccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCCC
Q 011519 58 MENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPN 137 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~~ 137 (484)
+|.+++.||.|+||.||+|...+++.+++|.+..........+..|+.+++.++||||+++++++...+..++||||+++
T Consensus 7 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 86 (261)
T cd05148 7 EFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELMEK 86 (261)
T ss_pred HHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeeccc
Confidence 46778889999999999999777899999999876655567899999999999999999999999999999999999999
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCC----ccc
Q 011519 138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----SYS 213 (484)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~----~~~ 213 (484)
++|.+++.+..+..+++..+..++.||+.||.|||+. |++|+||||+||++++++.+||+|||++....... ...
T Consensus 87 ~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~-~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~~~~~ 165 (261)
T cd05148 87 GSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQ-NSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKK 165 (261)
T ss_pred CCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccccCcceEEEcCCceEEEccccchhhcCCccccccCCC
Confidence 9999999765566799999999999999999999998 99999999999999999999999999987654321 223
Q ss_pred CCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHH
Q 011519 214 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRC 292 (484)
Q Consensus 214 ~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 292 (484)
++..|++||.+.+..++.++||||||+++|+|++ |+.|+............. .......+...++.+.+++.+|
T Consensus 166 ~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~ 240 (261)
T cd05148 166 IPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQIT-----AGYRMPCPAKCPQEIYKIMLEC 240 (261)
T ss_pred CceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHH-----hCCcCCCCCCCCHHHHHHHHHH
Confidence 4567999999988889999999999999999998 777775433221111111 1111223455678899999999
Q ss_pred hccCCCCCCChHHHHHHHHh
Q 011519 293 LQYEPRERPNPRSLVTALVT 312 (484)
Q Consensus 293 l~~dp~~Rps~~~il~~l~~ 312 (484)
|+.||.+|||+.++++.|+.
T Consensus 241 l~~~p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 241 WAAEPEDRPSFKALREELDN 260 (261)
T ss_pred cCCCchhCcCHHHHHHHHhc
Confidence 99999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-43 Score=341.15 Aligned_cols=243 Identities=19% Similarity=0.232 Sum_probs=199.9
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCC---CccHHHHHHHHHHHhcCCC-CceeeeeeeeeeCCceEEEE
Q 011519 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRN-RRLANLLGCCCEGDERLLVA 132 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h-pniv~l~~~~~~~~~~~lv~ 132 (484)
+|++++.||+|+||.||+|.. .+++.||||++.... ....+.+..|+.++..++| ++|+++++++...+..++||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 367888899999999999994 567899999997532 2235568899999999976 56888999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC----
Q 011519 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD---- 208 (484)
Q Consensus 133 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~---- 208 (484)
||+++|+|.+++. ..+.+++..+..++.||+.||.|||+. ||+||||||+|||++.++.+||+|||++.....
T Consensus 81 E~~~~g~L~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~ 157 (324)
T cd05587 81 EYVNGGDLMYHIQ--QVGKFKEPHAVFYAAEIAIGLFFLHSK-GIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKT 157 (324)
T ss_pred cCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCc
Confidence 9999999999986 345689999999999999999999998 999999999999999999999999999875321
Q ss_pred CCcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHH
Q 011519 209 GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288 (484)
Q Consensus 209 ~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 288 (484)
.....||+.|+|||++.+..++.++|||||||++|+|+||+.||.............. ....++...+..+.++
T Consensus 158 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~------~~~~~~~~~~~~~~~l 231 (324)
T cd05587 158 TRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIME------HNVSYPKSLSKEAVSI 231 (324)
T ss_pred eeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHc------CCCCCCCCCCHHHHHH
Confidence 2345689999999999988899999999999999999999998865432222111111 1123445567889999
Q ss_pred HHHHhccCCCCCCCh-----HHHHHH
Q 011519 289 ASRCLQYEPRERPNP-----RSLVTA 309 (484)
Q Consensus 289 i~~cl~~dp~~Rps~-----~~il~~ 309 (484)
+.+||..||.+|++. .++++|
T Consensus 232 i~~~l~~~P~~R~~~~~~~~~~~~~h 257 (324)
T cd05587 232 CKGLLTKHPAKRLGCGPTGERDIREH 257 (324)
T ss_pred HHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 999999999999976 666665
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-43 Score=347.56 Aligned_cols=245 Identities=16% Similarity=0.127 Sum_probs=198.5
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCC---ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEe
Q 011519 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 133 (484)
+|.+++.||.|+||+||++. ..+++.||||++..... ...+.+.+|++++..++||||+++++++.+.+..+||||
T Consensus 2 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E 81 (377)
T cd05629 2 DFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIME 81 (377)
T ss_pred CceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEe
Confidence 46788899999999999999 56789999999864321 224568899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----
Q 011519 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 209 (484)
Q Consensus 134 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~---- 209 (484)
|++||+|.+++. ..+.+++..+..++.|++.||.|||+. ||+||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~~~gg~L~~~l~--~~~~~~~~~~~~~~~ql~~aL~~LH~~-givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~ 158 (377)
T cd05629 82 FLPGGDLMTMLI--KYDTFSEDVTRFYMAECVLAIEAVHKL-GFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSA 158 (377)
T ss_pred CCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHEEECCCCCEEEeecccccccccccccc
Confidence 999999999996 345689999999999999999999999 9999999999999999999999999998532110
Q ss_pred -----------------------------------------------CcccCCCCCCCcccccCCCCCCCCceeehHHHH
Q 011519 210 -----------------------------------------------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLL 242 (484)
Q Consensus 210 -----------------------------------------------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l 242 (484)
....||+.|+|||++.+..++.++|||||||++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil 238 (377)
T cd05629 159 YYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIM 238 (377)
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhh
Confidence 024589999999999988899999999999999
Q ss_pred HHHhhCCCCCCchhhHHhhhccccccccccccCCCC--hHHHHHHHHHHHHHhccCCCCC---CChHHHHHHH
Q 011519 243 LDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFS--SDEGTELVRLASRCLQYEPRER---PNPRSLVTAL 310 (484)
Q Consensus 243 ~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~li~~cl~~dp~~R---ps~~~il~~l 310 (484)
|||+||..||............. ..... ..++ ...+.++.+|+.+||. +|.+| +|+.+++.|.
T Consensus 239 ~elltG~~Pf~~~~~~~~~~~i~-~~~~~---~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp 306 (377)
T cd05629 239 FECLIGWPPFCSENSHETYRKII-NWRET---LYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHP 306 (377)
T ss_pred hhhhcCCCCCCCCCHHHHHHHHH-ccCCc---cCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCC
Confidence 99999999886543221111111 00000 0111 2346789999999997 77765 5999999984
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-43 Score=340.80 Aligned_cols=242 Identities=19% Similarity=0.279 Sum_probs=197.9
Q ss_pred ccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCC---CccHHHHHHHHHHH---hcCCCCceeeeeeeeeeCCceEEE
Q 011519 59 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAV---GQLRNRRLANLLGCCCEGDERLLV 131 (484)
Q Consensus 59 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l---~~l~hpniv~l~~~~~~~~~~~lv 131 (484)
|++++.||+|+||.||+|. ..+++.||||+++... ....+.+.+|+.++ +.++||||+++++++...+..++|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 4677889999999999999 4578999999997532 12234566676654 567899999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC---
Q 011519 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD--- 208 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~--- 208 (484)
|||+++|+|..++. ...+++..+..++.||+.||.|||+. |++||||||+|||++.++.+||+|||++.....
T Consensus 81 ~E~~~~~~L~~~~~---~~~l~~~~~~~~~~qi~~al~~lH~~-~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~ 156 (324)
T cd05589 81 MEYAAGGDLMMHIH---TDVFSEPRAVFYAACVVLGLQYLHEN-KIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGD 156 (324)
T ss_pred EcCCCCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhC-CeEecCCCHHHeEECCCCcEEeCcccCCccCCCCCC
Confidence 99999999999884 35699999999999999999999998 999999999999999999999999999875322
Q ss_pred -CCcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHH
Q 011519 209 -GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287 (484)
Q Consensus 209 -~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (484)
.....||+.|+|||++.+..++.++|||||||++|+|++|+.||............... ...++...+..+.+
T Consensus 157 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~ 230 (324)
T cd05589 157 RTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVND------EVRYPRFLSREAIS 230 (324)
T ss_pred cccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC------CCCCCCCCCHHHHH
Confidence 23456899999999999888999999999999999999999998754332222111110 11234456788999
Q ss_pred HHHHHhccCCCCCC-----ChHHHHHHH
Q 011519 288 LASRCLQYEPRERP-----NPRSLVTAL 310 (484)
Q Consensus 288 li~~cl~~dp~~Rp-----s~~~il~~l 310 (484)
++.+||..||.+|| ++.+++++.
T Consensus 231 li~~~L~~dP~~R~~~~~~~~~~l~~~~ 258 (324)
T cd05589 231 IMRRLLRRNPERRLGSGEKDAEDVKKQP 258 (324)
T ss_pred HHHHHhhcCHhHcCCCCCCCHHHHhhCC
Confidence 99999999999999 577777763
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-43 Score=340.47 Aligned_cols=237 Identities=19% Similarity=0.257 Sum_probs=196.8
Q ss_pred cCCCCCCceEEEEEe-CCCcEEEEEEecCCC---CccHHHHHHHHHHHhcC-CCCceeeeeeeeeeCCceEEEEecCCCC
Q 011519 64 EHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMPND 138 (484)
Q Consensus 64 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~Ey~~~g 138 (484)
.||+|+||+||+|.. .+++.||||+++... ....+.+..|..++..+ +||||+++++++...+..++||||+++|
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~g 81 (320)
T cd05590 2 VLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGG 81 (320)
T ss_pred eeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCCc
Confidence 479999999999994 568899999987532 12345678899988876 6999999999999999999999999999
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC----CCcccC
Q 011519 139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYST 214 (484)
Q Consensus 139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~----~~~~~~ 214 (484)
+|.+++. ....+++..+..++.||+.||.|||+. |++||||||+|||++.++.+||+|||++..... .....|
T Consensus 82 ~L~~~i~--~~~~l~~~~~~~~~~ql~~~L~~lH~~-~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~~~g 158 (320)
T cd05590 82 DLMFHIQ--KSRRFDEARARFYAAEITSALMFLHDK-GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFCG 158 (320)
T ss_pred hHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCccccccc
Confidence 9999986 345699999999999999999999998 999999999999999999999999999875322 234568
Q ss_pred CCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHHhc
Q 011519 215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ 294 (484)
Q Consensus 215 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 294 (484)
|+.|+|||++.+..++.++|||||||++|+|++|+.||............... ...++...+.++.+|+.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~li~~~L~ 232 (320)
T cd05590 159 TPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILND------EVVYPTWLSQDAVDILKAFMT 232 (320)
T ss_pred CccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcC------CCCCCCCCCHHHHHHHHHHcc
Confidence 99999999999888999999999999999999999998754333222211111 112344467889999999999
Q ss_pred cCCCCCCCh------HHHHHH
Q 011519 295 YEPRERPNP------RSLVTA 309 (484)
Q Consensus 295 ~dp~~Rps~------~~il~~ 309 (484)
.||.+||++ ++++.|
T Consensus 233 ~dP~~R~~~~~~~~~~~~~~h 253 (320)
T cd05590 233 KNPTMRLGSLTLGGEEAILRH 253 (320)
T ss_pred cCHHHCCCCCCCCCHHHHHcC
Confidence 999999998 667766
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-42 Score=336.73 Aligned_cols=253 Identities=18% Similarity=0.272 Sum_probs=204.0
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCc----EEEEEEecCCCC-ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQF----RIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 130 (484)
.+|++++.||+|+||+||+|++ .++. .||||.++.... ...+++.+|+.+++.++||||+++++++... ..++
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~ 85 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 85 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence 3567888889999999999984 3443 489999875432 2356789999999999999999999998764 5789
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCC
Q 011519 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR 210 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 210 (484)
|+||+++|+|.+++... ...+++..++.++.||+.||.|||+. |++||||||+|||+++++.+||+|||+++......
T Consensus 86 v~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~qi~~~L~~LH~~-~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 163 (316)
T cd05108 86 ITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEER-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADE 163 (316)
T ss_pred eeecCCCCCHHHHHHhc-cccCCHHHHHHHHHHHHHHHHHHHhc-CeeccccchhheEecCCCcEEEccccccccccCCC
Confidence 99999999999999742 34588999999999999999999999 99999999999999999999999999998754322
Q ss_pred ------cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHH
Q 011519 211 ------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283 (484)
Q Consensus 211 ------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (484)
...++..|+|||++.+..++.++|||||||++|||++ |..|+.......... ..........+..++.
T Consensus 164 ~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 238 (316)
T cd05108 164 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS-----ILEKGERLPQPPICTI 238 (316)
T ss_pred cceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHH-----HHhCCCCCCCCCCCCH
Confidence 1223567999999998899999999999999999998 887775433222111 1111111122344567
Q ss_pred HHHHHHHHHhccCCCCCCChHHHHHHHHhhhcCC
Q 011519 284 ELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (484)
Q Consensus 284 ~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 317 (484)
++.+++..||..+|.+|||+.+++..|..+....
T Consensus 239 ~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~ 272 (316)
T cd05108 239 DVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 272 (316)
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCC
Confidence 8999999999999999999999999999887655
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-42 Score=332.54 Aligned_cols=243 Identities=19% Similarity=0.235 Sum_probs=197.8
Q ss_pred CCCCCCceEEEEE-eCCCcEEEEEEecCCCCc---cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCCCCCH
Q 011519 65 HGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTL 140 (484)
Q Consensus 65 lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~~gsL 140 (484)
||+|+||+||++. ..+++.||||++...... ..+.+..|+.+++.++||||+++.+++......++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 6999999999999 457889999998654322 235678899999999999999999999999999999999999999
Q ss_pred Hhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----CcccC
Q 011519 141 AKHLFH--WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSYST 214 (484)
Q Consensus 141 ~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~----~~~~~ 214 (484)
.+++.. .....+++..+..++.||+.||.|||+. +++||||||+||+++.++.++|+|||++...... ....|
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~g 159 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR-RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYAG 159 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCCCEEEeeCccceecCCCCccccccCC
Confidence 988743 1345689999999999999999999999 9999999999999999999999999998765432 23468
Q ss_pred CCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHHhc
Q 011519 215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ 294 (484)
Q Consensus 215 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 294 (484)
|+.|+|||++.+..++.++|||||||++|+|++|+.||................... ...++...+..+.+++.+||+
T Consensus 160 ~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~ 237 (280)
T cd05608 160 TPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILND--SVTYPDKFSPASKSFCEALLA 237 (280)
T ss_pred CcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhccc--CCCCcccCCHHHHHHHHHHhc
Confidence 899999999999999999999999999999999999886432111110011111111 112345567889999999999
Q ss_pred cCCCCCC-----ChHHHHHHH
Q 011519 295 YEPRERP-----NPRSLVTAL 310 (484)
Q Consensus 295 ~dp~~Rp-----s~~~il~~l 310 (484)
.||++|| +++++++|-
T Consensus 238 ~~P~~R~~~~~~~~~~~l~h~ 258 (280)
T cd05608 238 KDPEKRLGFRDGNCDGLRTHP 258 (280)
T ss_pred CCHHHhcCCCCCCHHHHhcCh
Confidence 9999999 778888873
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-43 Score=339.43 Aligned_cols=238 Identities=17% Similarity=0.229 Sum_probs=197.5
Q ss_pred cCCCCCCceEEEEEe-CCCcEEEEEEecCCC---CccHHHHHHHHHHHhcC-CCCceeeeeeeeeeCCceEEEEecCCCC
Q 011519 64 EHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMPND 138 (484)
Q Consensus 64 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~Ey~~~g 138 (484)
.||+|+||.||+|.. .+++.||||+++... ....+.+..|..++..+ +||||+++++++...+..++||||+++|
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 81 (321)
T cd05591 2 VLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNGG 81 (321)
T ss_pred ccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCCC
Confidence 579999999999994 568899999997532 12345678899999876 7999999999999999999999999999
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC----CCcccC
Q 011519 139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYST 214 (484)
Q Consensus 139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~----~~~~~~ 214 (484)
+|..++. ..+.+++..+..++.||+.||.|||+. |++||||||+|||++.++.+||+|||++..... .....|
T Consensus 82 ~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g 158 (321)
T cd05591 82 DLMFQIQ--RSRKFDEPRSRFYAAEVTLALMFLHRH-GVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFCG 158 (321)
T ss_pred cHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHeEECCCCCEEEeecccceecccCCcccccccc
Confidence 9999986 345689999999999999999999999 999999999999999999999999999875322 234568
Q ss_pred CCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHHhc
Q 011519 215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ 294 (484)
Q Consensus 215 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 294 (484)
|+.|+|||++.+..++.++|||||||++|+|+||+.||............... ...++...+.++.+++.+||.
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~ll~~~L~ 232 (321)
T cd05591 159 TPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHD------DVLYPVWLSKEAVSILKAFMT 232 (321)
T ss_pred CccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHHHHHHHhc
Confidence 99999999999888999999999999999999999988754332222111111 012334456789999999999
Q ss_pred cCCCCCC-------ChHHHHHHH
Q 011519 295 YEPRERP-------NPRSLVTAL 310 (484)
Q Consensus 295 ~dp~~Rp-------s~~~il~~l 310 (484)
.||++|| ++.++++|-
T Consensus 233 ~dp~~R~~~~~~~~~~~~~~~hp 255 (321)
T cd05591 233 KNPNKRLGCVASQGGEDAIKQHP 255 (321)
T ss_pred cCHHHcCCCCCCCCCHHHHhcCC
Confidence 9999999 888888774
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-43 Score=345.62 Aligned_cols=250 Identities=15% Similarity=0.130 Sum_probs=204.5
Q ss_pred cCCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCC---CccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceE
Q 011519 54 SGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129 (484)
Q Consensus 54 ~~f~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 129 (484)
-+..+|++++.||+|+||+||++. ..+++.||||++.... ......+.+|+.+++.++||||+++++++.+.+..+
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~ 119 (370)
T cd05596 40 MKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLY 119 (370)
T ss_pred CCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence 345678889999999999999999 4578899999996432 122445789999999999999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC
Q 011519 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 209 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 209 (484)
+||||++||+|.+++. ...+++..+..++.||+.||.|||+. ||+||||||+|||++.++.+||+|||++......
T Consensus 120 lv~Ey~~gg~L~~~l~---~~~l~~~~~~~~~~qi~~aL~~LH~~-~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~ 195 (370)
T cd05596 120 MVMEYMPGGDLVNLMS---NYDIPEKWARFYTAEVVLALDAIHSM-GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDAN 195 (370)
T ss_pred EEEcCCCCCcHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHEEEcCCCCEEEEeccceeeccCC
Confidence 9999999999999985 34588999999999999999999998 9999999999999999999999999998765432
Q ss_pred -----CcccCCCCCCCcccccCC----CCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCC--
Q 011519 210 -----RSYSTNLAFTPPEYLRTG----RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFS-- 278 (484)
Q Consensus 210 -----~~~~~t~~y~aPE~~~~~----~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 278 (484)
....||+.|+|||++.+. .++.++|||||||++|||++|+.||............... .....++
T Consensus 196 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~----~~~~~~~~~ 271 (370)
T cd05596 196 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDH----KNSLTFPDD 271 (370)
T ss_pred CcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcC----CCcCCCCCc
Confidence 245689999999998753 3788999999999999999999998765332221111110 0001122
Q ss_pred hHHHHHHHHHHHHHhccCCCC--CCChHHHHHHHH
Q 011519 279 SDEGTELVRLASRCLQYEPRE--RPNPRSLVTALV 311 (484)
Q Consensus 279 ~~~~~~l~~li~~cl~~dp~~--Rps~~~il~~l~ 311 (484)
...+.++.+|+.+||..+|.+ |+|+.++++|.+
T Consensus 272 ~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~ 306 (370)
T cd05596 272 IEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPF 306 (370)
T ss_pred CCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcc
Confidence 235788999999999999988 999999999854
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-43 Score=349.34 Aligned_cols=248 Identities=17% Similarity=0.162 Sum_probs=200.7
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCC---ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEe
Q 011519 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 133 (484)
.|++++.||+|+||+||++. ..+++.||||++..... .....+.+|+.+|+.++||||+++++.+.+.+..++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence 57889999999999999999 55689999999864321 224568899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC-----
Q 011519 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----- 208 (484)
Q Consensus 134 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~----- 208 (484)
|+++|+|.+++. ..+.+++..+..++.||+.||.|||+. ||+||||||+|||++.++.+||+|||++.....
T Consensus 82 ~~~~g~L~~~i~--~~~~~~~~~~~~~~~qi~~al~~lH~~-~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~ 158 (376)
T cd05598 82 YIPGGDMMSLLI--RLGIFEEDLARFYIAELTCAIESVHKM-GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSK 158 (376)
T ss_pred CCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeCCCCHHHEEECCCCCEEEEeCCCCcccccccccc
Confidence 999999999996 345689999999999999999999998 999999999999999999999999999742210
Q ss_pred ------------------------------------------CCcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHh
Q 011519 209 ------------------------------------------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLL 246 (484)
Q Consensus 209 ------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~ 246 (484)
.....||+.|+|||++.+..++.++|||||||++|||+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell 238 (376)
T cd05598 159 YYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML 238 (376)
T ss_pred ccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehh
Confidence 01246899999999999888999999999999999999
Q ss_pred hCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHHhccCCCCCC---ChHHHHHHHH
Q 011519 247 SGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP---NPRSLVTALV 311 (484)
Q Consensus 247 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp---s~~~il~~l~ 311 (484)
+|+.||.............. . ............++.+.+++.+|+ .+|.+|+ |+.++++|-+
T Consensus 239 ~G~~Pf~~~~~~~~~~~i~~-~-~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~ 303 (376)
T cd05598 239 VGQPPFLADTPAETQLKVIN-W-ETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAHPF 303 (376)
T ss_pred hCCCCCCCCCHHHHHHHHhc-c-CccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCC
Confidence 99999875432221111100 0 000111112245678889999977 5999999 8999998843
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-42 Score=333.32 Aligned_cols=250 Identities=18% Similarity=0.226 Sum_probs=195.5
Q ss_pred cccccccCCCCCCceEEEEEe-C-CCcEEEEEEecCCCCc--cHHHHHHHHHHHhcC---CCCceeeeeeeee-----eC
Q 011519 58 MENIVSEHGEKAPNVVYKGKL-E-NQFRIAVKRFNRSAWP--DARQFLEEARAVGQL---RNRRLANLLGCCC-----EG 125 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~-~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l---~hpniv~l~~~~~-----~~ 125 (484)
+|++++.||+|+||+||+|.. . +++.||||.++..... ....+.+|+.+++.+ +||||+++++++. ..
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~ 81 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE 81 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence 578889999999999999985 3 4688999998654322 234567788777766 6999999999885 24
Q ss_pred CceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccc
Q 011519 126 DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN 205 (484)
Q Consensus 126 ~~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 205 (484)
...++||||++ ++|.+++.......+++..+..++.||+.||.|||+. |++||||||+|||++.++.+||+|||+++.
T Consensus 82 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~-~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~ 159 (290)
T cd07862 82 TKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH-RVVHRDLKPQNILVTSSGQIKLADFGLARI 159 (290)
T ss_pred CcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCCHHHEEEcCCCCEEEccccceEe
Confidence 56899999996 5899999755556689999999999999999999999 999999999999999999999999999876
Q ss_pred cCCC---CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcccc--------c------c
Q 011519 206 SRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ--------T------L 268 (484)
Q Consensus 206 ~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~--------~------~ 268 (484)
.... ....||+.|+|||++.+..++.++|||||||++|||++|+.||.............. . +
T Consensus 160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 239 (290)
T cd07862 160 YSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVAL 239 (290)
T ss_pred ccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcc
Confidence 5432 345678999999999888899999999999999999999988765321111000000 0 0
Q ss_pred cccccc-------CCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 269 TDSCLE-------GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 269 ~~~~~~-------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
...... ....+..+..+.+|+.+||+.||++|||+.++++|
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~h 287 (290)
T cd07862 240 PRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 287 (290)
T ss_pred cchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcC
Confidence 000000 00112356778999999999999999999999976
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-43 Score=347.84 Aligned_cols=246 Identities=17% Similarity=0.165 Sum_probs=198.1
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCC---ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEe
Q 011519 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 133 (484)
.|.+++.||+|+||+||+|. ..+++.||||++..... .....+.+|+.+++.++||||+++++.+.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 46788899999999999999 56788999999975422 224568899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC-----
Q 011519 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----- 208 (484)
Q Consensus 134 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~----- 208 (484)
|+++|+|.+++.+ .+.+++..+..++.||+.||.|||+. ||+||||||+|||++.++.+||+|||++.....
T Consensus 82 ~~~gg~L~~~l~~--~~~~~e~~~~~~~~qi~~al~~lH~~-~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~ 158 (382)
T cd05625 82 YIPGGDMMSLLIR--MGIFPEDLARFYIAELTCAVESVHKM-GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSK 158 (382)
T ss_pred CCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEECCCCCEEEeECCCCcccccccccc
Confidence 9999999999963 45689999999999999999999999 999999999999999999999999999743210
Q ss_pred ----------------------------------------------CCcccCCCCCCCcccccCCCCCCCCceeehHHHH
Q 011519 209 ----------------------------------------------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLL 242 (484)
Q Consensus 209 ----------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l 242 (484)
.....||+.|+|||++.+..++.++|||||||++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil 238 (382)
T cd05625 159 YYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVIL 238 (382)
T ss_pred ccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHH
Confidence 0124689999999999988899999999999999
Q ss_pred HHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHHhccCCCCCCC---hHHHHHH
Q 011519 243 LDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPN---PRSLVTA 309 (484)
Q Consensus 243 ~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps---~~~il~~ 309 (484)
|||++|+.||.............. .. ...........++++.+++.+++ .+|.+|++ +.+++.|
T Consensus 239 ~elltG~~Pf~~~~~~~~~~~i~~-~~-~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~h 305 (382)
T cd05625 239 YEMLVGQPPFLAQTPLETQMKVIN-WQ-TSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAH 305 (382)
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHc-cC-CCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcC
Confidence 999999999875432211111110 00 00111112345678889998876 59999987 8888887
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-42 Score=337.70 Aligned_cols=249 Identities=18% Similarity=0.158 Sum_probs=213.1
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCcc---HHHHHHHHHHHhcCC-CCceeeeeeeeeeCCceEEE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPD---ARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLV 131 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~lv 131 (484)
..|.+.+.||+|.||.||+++. .+|+.+|+|++.+..... ...+.+|+.+|+++. |||||.++++|.+...+++|
T Consensus 35 ~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lv 114 (382)
T KOG0032|consen 35 EKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLV 114 (382)
T ss_pred ccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEE
Confidence 4677778999999999999994 559999999997665432 457999999999998 99999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecC----CCCceeeccCCccccC
Q 011519 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD----DVNPRLSCFGLMKNSR 207 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~----~~~~kl~DfG~a~~~~ 207 (484)
||+|.||.|.+.|... .+++..+..++.||+.++.|||+. |++||||||+|+|+.. ++.+|++|||++....
T Consensus 115 mEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~-gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~ 190 (382)
T KOG0032|consen 115 MELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSL-GVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIK 190 (382)
T ss_pred EEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhC-CceeccCCHHHeeeccccCCCCcEEEeeCCCceEcc
Confidence 9999999999999754 399999999999999999999998 9999999999999963 3579999999999877
Q ss_pred CC---CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHH
Q 011519 208 DG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTE 284 (484)
Q Consensus 208 ~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (484)
.. ...+||+.|+|||++....++..+||||+||++|.|++|..||...............-. ..........+..
T Consensus 191 ~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~--~f~~~~w~~is~~ 268 (382)
T KOG0032|consen 191 PGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDF--DFTSEPWDDISES 268 (382)
T ss_pred CCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCC--CCCCCCccccCHH
Confidence 63 467899999999999999999999999999999999999999987754433332221111 1122233556899
Q ss_pred HHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 285 LVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 285 l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
+.+++..|+..||..|+|+.++++|.|
T Consensus 269 akd~i~~ll~~dp~~R~ta~~~L~HpW 295 (382)
T KOG0032|consen 269 AKDFIRKLLEFDPRKRLTAAQALQHPW 295 (382)
T ss_pred HHHHHHHhcccCcccCCCHHHHhcCcc
Confidence 999999999999999999999999855
|
|
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-42 Score=330.07 Aligned_cols=244 Identities=16% Similarity=0.195 Sum_probs=195.7
Q ss_pred CCCCCCceEEEEE-eCCCcEEEEEEecCCCCc---cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCCCCCH
Q 011519 65 HGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTL 140 (484)
Q Consensus 65 lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~~gsL 140 (484)
||+|+||+||++. ..+|+.||+|++...... ....+..|++++++++||||+++++++..+...++||||++||+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 6999999999999 457899999999643221 234566799999999999999999999999999999999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC---CcccCCCC
Q 011519 141 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---RSYSTNLA 217 (484)
Q Consensus 141 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~---~~~~~t~~ 217 (484)
.+++.......+++..+..++.||+.||.|||+. |++||||||+||+++.++.++|+|||++...... ....+++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~ 159 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSM-DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQRAGTNG 159 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC-CEEEccCChHhEEEcCCCCEEEeeceeeeecCCCceeeccCCCCC
Confidence 9988654555689999999999999999999998 9999999999999999999999999998765443 23467899
Q ss_pred CCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHHhccCC
Q 011519 218 FTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEP 297 (484)
Q Consensus 218 y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 297 (484)
|+|||++.+..++.++|||||||++|+|++|+.||...................... ......+.++.+|+..||+.||
T Consensus 160 y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~~P 238 (277)
T cd05607 160 YMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVK-FEHQNFTEESKDICRLFLAKKP 238 (277)
T ss_pred ccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccccc-cccccCCHHHHHHHHHHhccCH
Confidence 999999998889999999999999999999998876432111110111111111000 0112456789999999999999
Q ss_pred CCCCChHHHHHHH
Q 011519 298 RERPNPRSLVTAL 310 (484)
Q Consensus 298 ~~Rps~~~il~~l 310 (484)
++||++.++++.+
T Consensus 239 ~~R~~~~~~~~~~ 251 (277)
T cd05607 239 EDRLGSREKNDDP 251 (277)
T ss_pred hhCCCCccchhhh
Confidence 9999997665443
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-42 Score=345.22 Aligned_cols=253 Identities=21% Similarity=0.290 Sum_probs=203.1
Q ss_pred CcccccccCCCCCCceEEEEEeC------CCcEEEEEEecCCCCc-cHHHHHHHHHHHhcCC-CCceeeeeeeeeeCCce
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLR-NRRLANLLGCCCEGDER 128 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~ 128 (484)
..+.+.+.||+|+||.||+|+.. .+..||||+++..... ..+.|.+|+.+|.++. |||||++++++.+.+..
T Consensus 37 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~ 116 (400)
T cd05105 37 DGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPI 116 (400)
T ss_pred cceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCce
Confidence 35677788999999999999842 1346999999754332 2457999999999996 99999999999999999
Q ss_pred EEEEecCCCCCHHhhhccCC------------------------------------------------------------
Q 011519 129 LLVAEYMPNDTLAKHLFHWE------------------------------------------------------------ 148 (484)
Q Consensus 129 ~lv~Ey~~~gsL~~~l~~~~------------------------------------------------------------ 148 (484)
+||||||++|+|.++|....
T Consensus 117 ~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (400)
T cd05105 117 YIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKE 196 (400)
T ss_pred EEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhhh
Confidence 99999999999999885321
Q ss_pred ----------------------------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCC
Q 011519 149 ----------------------------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN 194 (484)
Q Consensus 149 ----------------------------------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~ 194 (484)
...+++..+..++.||+.||.|||+. +++||||||+|||++.++.
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~-~ivH~dikp~Nill~~~~~ 275 (400)
T cd05105 197 ASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK-NCVHRDLAARNVLLAQGKI 275 (400)
T ss_pred hhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCChHhEEEeCCCE
Confidence 12478889999999999999999998 9999999999999999999
Q ss_pred ceeeccCCccccCCC------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccc
Q 011519 195 PRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQT 267 (484)
Q Consensus 195 ~kl~DfG~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~ 267 (484)
+||+|||+++..... ....+++.|+|||++.+..++.++|||||||++|||++ |..|++....+........
T Consensus 276 ~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~~- 354 (400)
T cd05105 276 VKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIK- 354 (400)
T ss_pred EEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHHh-
Confidence 999999998765332 12345678999999998889999999999999999997 8877765322111111110
Q ss_pred cccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhh
Q 011519 268 LTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQ 314 (484)
Q Consensus 268 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~ 314 (484)
.......+...+..+.+++.+||+.||++|||+.+|.+.|..+.
T Consensus 355 ---~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~ 398 (400)
T cd05105 355 ---SGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL 398 (400)
T ss_pred ---cCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence 01111233456788999999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-42 Score=337.42 Aligned_cols=237 Identities=19% Similarity=0.251 Sum_probs=194.3
Q ss_pred cCCCCCCceEEEEEe-CCCcEEEEEEecCCC---CccHHHHHHHHHHHhcC-CCCceeeeeeeeeeCCceEEEEecCCCC
Q 011519 64 EHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMPND 138 (484)
Q Consensus 64 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~Ey~~~g 138 (484)
.||+|+||+||+|.. .+++.||||+++... ....+.+..|..++..+ +||||+++++++...+..++||||++||
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~gg 81 (316)
T cd05592 2 VLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNGG 81 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence 579999999999994 568899999997532 12344566777777654 8999999999999999999999999999
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC----CCcccC
Q 011519 139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYST 214 (484)
Q Consensus 139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~----~~~~~~ 214 (484)
+|.+++. ....+++..+..++.||+.||.|||+. ||+||||||+|||++.++.+||+|||++..... .....|
T Consensus 82 ~L~~~~~--~~~~~~~~~~~~~~~qi~~al~~LH~~-~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~~~g 158 (316)
T cd05592 82 DLMFHIQ--SSGRFDEARARFYAAEIICGLQFLHKK-GIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCG 158 (316)
T ss_pred cHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCccccccC
Confidence 9999986 345689999999999999999999998 999999999999999999999999999875432 234568
Q ss_pred CCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHHhc
Q 011519 215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ 294 (484)
Q Consensus 215 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 294 (484)
|+.|+|||++.+..++.++|||||||++|||++|..||.............. ....++...+.++.+|+.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~------~~~~~~~~~~~~~~~ll~~~l~ 232 (316)
T cd05592 159 TPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILN------DRPHFPRWISKEAKDCLSKLFE 232 (316)
T ss_pred CccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHc------CCCCCCCCCCHHHHHHHHHHcc
Confidence 9999999999988899999999999999999999998875433222111111 0122345567889999999999
Q ss_pred cCCCCCCChH-HHHHH
Q 011519 295 YEPRERPNPR-SLVTA 309 (484)
Q Consensus 295 ~dp~~Rps~~-~il~~ 309 (484)
.||.+||++. ++++|
T Consensus 233 ~~P~~R~~~~~~l~~h 248 (316)
T cd05592 233 RDPTKRLGVDGDIRQH 248 (316)
T ss_pred CCHHHcCCChHHHHcC
Confidence 9999999875 66555
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-42 Score=338.97 Aligned_cols=243 Identities=18% Similarity=0.231 Sum_probs=199.8
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCC---ccHHHHHHHHHHHhcC-CCCceeeeeeeeeeCCceEEEE
Q 011519 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVA 132 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~ 132 (484)
+|++++.||+|+||+||+|.. .+++.||||+++.... ...+.+..|..++..+ +||+|+++++++...+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 356788899999999999994 5678999999975422 2234577788888877 5899999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC----
Q 011519 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD---- 208 (484)
Q Consensus 133 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~---- 208 (484)
||+++|+|.+++. ..+.+++..+..++.||+.||.|||+. ||+||||||+|||++.++.+||+|||+++....
T Consensus 81 E~~~~g~L~~~~~--~~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~ 157 (323)
T cd05616 81 EYVNGGDLMYQIQ--QVGRFKEPHAVFYAAEIAIGLFFLHSK-GIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVT 157 (323)
T ss_pred cCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CEEecCCCHHHeEECCCCcEEEccCCCceecCCCCCc
Confidence 9999999999986 345689999999999999999999998 999999999999999999999999999875432
Q ss_pred CCcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHH
Q 011519 209 GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288 (484)
Q Consensus 209 ~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 288 (484)
.....||+.|+|||++.+..++.++|||||||++|||+||+.||.............. . ...++...+.++.++
T Consensus 158 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~----~--~~~~p~~~s~~~~~l 231 (323)
T cd05616 158 TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME----H--NVAYPKSMSKEAVAI 231 (323)
T ss_pred cccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHh----C--CCCCCCcCCHHHHHH
Confidence 2345689999999999998999999999999999999999998875433222211111 1 112445567889999
Q ss_pred HHHHhccCCCCCCCh-----HHHHHH
Q 011519 289 ASRCLQYEPRERPNP-----RSLVTA 309 (484)
Q Consensus 289 i~~cl~~dp~~Rps~-----~~il~~ 309 (484)
+.+||+.||.+|++. .++++|
T Consensus 232 i~~~l~~~p~~R~~~~~~~~~~i~~h 257 (323)
T cd05616 232 CKGLMTKHPGKRLGCGPEGERDIKEH 257 (323)
T ss_pred HHHHcccCHHhcCCCCCCCHHHHhcC
Confidence 999999999999985 566655
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-43 Score=338.69 Aligned_cols=245 Identities=20% Similarity=0.249 Sum_probs=206.0
Q ss_pred cccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCc---cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecC
Q 011519 60 NIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 60 ~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~ 135 (484)
.-+++||.|+||.||-++ ..+...||||++.-+..+ .+.++++|+..|++++|||+|.+-|++......|||||||
T Consensus 29 ~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEYC 108 (948)
T KOG0577|consen 29 SDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEYC 108 (948)
T ss_pred HHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHHH
Confidence 335778999999999999 678899999999866544 3678999999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCCcccCC
Q 011519 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN 215 (484)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~t 215 (484)
-| |-.+++.- -+.++.+.++..|..+.+.||.|||+. +.||||||..|||+++.|.|||+|||.+....+..+++||
T Consensus 109 lG-SAsDlleV-hkKplqEvEIAAi~~gaL~gLaYLHS~-~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAnsFvGT 185 (948)
T KOG0577|consen 109 LG-SASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSH-NRIHRDIKAGNILLSEPGLVKLADFGSASIMAPANSFVGT 185 (948)
T ss_pred hc-cHHHHHHH-HhccchHHHHHHHHHHHHHHHHHHHHh-hHHhhhccccceEecCCCeeeeccccchhhcCchhcccCC
Confidence 55 88887742 346799999999999999999999998 9999999999999999999999999999999999999999
Q ss_pred CCCCCccccc---CCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHH
Q 011519 216 LAFTPPEYLR---TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRC 292 (484)
Q Consensus 216 ~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 292 (484)
|.|||||++. .+.|+-+.||||||++.+||.-.++|.+.............. -.+.+ .....+..+.+|+..|
T Consensus 186 PywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQN-esPtL---qs~eWS~~F~~Fvd~C 261 (948)
T KOG0577|consen 186 PYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN-ESPTL---QSNEWSDYFRNFVDSC 261 (948)
T ss_pred ccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhc-CCCCC---CCchhHHHHHHHHHHH
Confidence 9999999986 367999999999999999999999775432211111111111 11111 1355678899999999
Q ss_pred hccCCCCCCChHHHHHHHH
Q 011519 293 LQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 293 l~~dp~~Rps~~~il~~l~ 311 (484)
|++-|.+|||..+++.|-.
T Consensus 262 LqKipqeRptse~ll~H~f 280 (948)
T KOG0577|consen 262 LQKIPQERPTSEELLKHRF 280 (948)
T ss_pred HhhCcccCCcHHHHhhcch
Confidence 9999999999999998743
|
|
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-43 Score=341.72 Aligned_cols=248 Identities=18% Similarity=0.209 Sum_probs=199.7
Q ss_pred cccccccCCCCCCceEEEEEe----CCCcEEEEEEecCCCC----ccHHHHHHHHHHHhcC-CCCceeeeeeeeeeCCce
Q 011519 58 MENIVSEHGEKAPNVVYKGKL----ENQFRIAVKRFNRSAW----PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDER 128 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~ 128 (484)
+|++++.||+|+||+||++.. .+++.||+|++..... ...+.+..|+.++..+ +||||+++++++...+..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 367888999999999999984 3578999999864321 2245688899999999 599999999999999999
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC
Q 011519 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 208 (484)
Q Consensus 129 ~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~ 208 (484)
++||||+++|+|.+++. ....+++..+..++.||+.||.|||+. |++||||||+|||++.++.+||+|||+++....
T Consensus 81 ~lv~e~~~~g~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~ 157 (332)
T cd05614 81 HLILDYVSGGEMFTHLY--QRDNFSEDEVRFYSGEIILALEHLHKL-GIVYRDIKLENILLDSEGHVVLTDFGLSKEFLS 157 (332)
T ss_pred EEEEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CcEecCCCHHHeEECCCCCEEEeeCcCCccccc
Confidence 99999999999999996 345689999999999999999999998 999999999999999999999999999876432
Q ss_pred C-----CcccCCCCCCCcccccCCC-CCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHH
Q 011519 209 G-----RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG 282 (484)
Q Consensus 209 ~-----~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (484)
. ....||+.|+|||++.+.. ++.++|||||||++|||+||+.||...............+.. ....++...+
T Consensus 158 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 235 (332)
T cd05614 158 EEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILK--CDPPFPSFIG 235 (332)
T ss_pred cCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhc--CCCCCCCCCC
Confidence 1 2456899999999998654 788999999999999999999988532111000000000000 1123345567
Q ss_pred HHHHHHHHHHhccCCCCCC-----ChHHHHHHH
Q 011519 283 TELVRLASRCLQYEPRERP-----NPRSLVTAL 310 (484)
Q Consensus 283 ~~l~~li~~cl~~dp~~Rp-----s~~~il~~l 310 (484)
..+.+++.+||+.||++|| +++++++|-
T Consensus 236 ~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~ 268 (332)
T cd05614 236 PEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHP 268 (332)
T ss_pred HHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCC
Confidence 8899999999999999999 788888874
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-42 Score=337.83 Aligned_cols=237 Identities=19% Similarity=0.219 Sum_probs=195.4
Q ss_pred cCCCCCCceEEEEEe-CCCcEEEEEEecCCC---CccHHHHHHHHHHHhcC-CCCceeeeeeeeeeCCceEEEEecCCCC
Q 011519 64 EHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMPND 138 (484)
Q Consensus 64 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~Ey~~~g 138 (484)
.||+|+||.||+|.. .+|+.||||+++... ......+..|..++..+ +||||+++++++...+..++||||+++|
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g 81 (316)
T cd05620 2 VLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNGG 81 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCCC
Confidence 579999999999994 568899999997532 12345577788888765 8999999999999999999999999999
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC----CCcccC
Q 011519 139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYST 214 (484)
Q Consensus 139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~----~~~~~~ 214 (484)
+|.+++. ....+++..+..++.||+.||+|||+. ||+||||||+|||++.++.+||+|||+++.... .....|
T Consensus 82 ~L~~~i~--~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 158 (316)
T cd05620 82 DLMFHIQ--DKGRFDLYRATFYAAEIVCGLQFLHSK-GIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFCG 158 (316)
T ss_pred cHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceeccCC
Confidence 9999986 345689999999999999999999999 999999999999999999999999999875321 234568
Q ss_pred CCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHHhc
Q 011519 215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ 294 (484)
Q Consensus 215 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 294 (484)
|+.|+|||++.+..++.++|||||||++|+|++|..||............... ...++...+.++.+|+.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~li~~~l~ 232 (316)
T cd05620 159 TPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVD------TPHYPRWITKESKDILEKLFE 232 (316)
T ss_pred CcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC------CCCCCCCCCHHHHHHHHHHcc
Confidence 99999999999889999999999999999999999998754332222111110 112344456789999999999
Q ss_pred cCCCCCCChH-HHHHH
Q 011519 295 YEPRERPNPR-SLVTA 309 (484)
Q Consensus 295 ~dp~~Rps~~-~il~~ 309 (484)
.||.+||++. ++++|
T Consensus 233 ~dP~~R~~~~~~~~~h 248 (316)
T cd05620 233 RDPTRRLGVVGNIRGH 248 (316)
T ss_pred CCHHHcCCChHHHHcC
Confidence 9999999984 66655
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-42 Score=329.29 Aligned_cols=249 Identities=22% Similarity=0.327 Sum_probs=204.4
Q ss_pred CcccccccCCCCCCceEEEEEeC------CCcEEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 129 (484)
..|.+++.||+|+||.||+|... +++.||||.++..... ..+.|.+|+++++.++||||+++++++......+
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 84 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI 84 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence 35677888999999999999853 3578999999765544 3567999999999999999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCC------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCcee
Q 011519 130 LVAEYMPNDTLAKHLFHWE------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRL 197 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~~~------------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl 197 (484)
+||||+++++|.+++.... ...+++.++..++.|++.||.|||+. |++||||||+||+++.++.+||
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~-~i~h~dlkp~nili~~~~~~kl 163 (280)
T cd05049 85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ-HFVHRDLATRNCLVGYDLVVKI 163 (280)
T ss_pred EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC-CeeccccccceEEEcCCCeEEE
Confidence 9999999999999996432 23578999999999999999999999 9999999999999999999999
Q ss_pred eccCCccccCCC------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhcccccccc
Q 011519 198 SCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTD 270 (484)
Q Consensus 198 ~DfG~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 270 (484)
+|||++...... ....+++.|+|||++.+..++.++|||||||++|||++ |..||...............
T Consensus 164 ~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~~--- 240 (280)
T cd05049 164 GDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQG--- 240 (280)
T ss_pred CCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC---
Confidence 999998754321 23344678999999999999999999999999999999 88887543322211111111
Q ss_pred ccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 271 SCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 271 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
.....+...+..+.+++.+||..||++||++.++++.|+
T Consensus 241 --~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 241 --RLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred --CcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 111223445688999999999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-42 Score=319.33 Aligned_cols=251 Identities=18% Similarity=0.205 Sum_probs=200.9
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCc--cHHHHHHHHHHHhcCCCCc-eeeeeeeeeeCC------
Q 011519 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRR-LANLLGCCCEGD------ 126 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpn-iv~l~~~~~~~~------ 126 (484)
..|..+++||+|+||+||+|+ ..+|+.||+|++...... -.....+|+.+|+.++|+| ||.+++++...+
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~ 90 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG 90 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence 456677788999999999999 678899999999866432 2345789999999999999 999999998877
Q ss_pred ceEEEEecCCCCCHHhhhccCCC--CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCcc
Q 011519 127 ERLLVAEYMPNDTLAKHLFHWET--QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK 204 (484)
Q Consensus 127 ~~~lv~Ey~~~gsL~~~l~~~~~--~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~ 204 (484)
.+++||||++. +|..++..... ..++...+..++.||+.||+|||++ +|+||||||.||||+++|.+||+|||+|+
T Consensus 91 ~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~-~IlHRDLKPQNlLi~~~G~lKlaDFGlAr 168 (323)
T KOG0594|consen 91 KLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH-GILHRDLKPQNLLISSSGVLKLADFGLAR 168 (323)
T ss_pred eEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC-CeecccCCcceEEECCCCcEeeeccchHH
Confidence 78999999966 99999975432 3577889999999999999999999 99999999999999999999999999999
Q ss_pred ccCCC----CcccCCCCCCCcccccCC-CCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhc-----------ccccc
Q 011519 205 NSRDG----RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR-----------NIQTL 268 (484)
Q Consensus 205 ~~~~~----~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~-----------~~~~~ 268 (484)
...-. ....+|..|.|||++.+. .|+...||||+||++.||++++..|++...-..... ....+
T Consensus 169 a~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v 248 (323)
T KOG0594|consen 169 AFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGV 248 (323)
T ss_pred HhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCc
Confidence 76532 345678999999999987 599999999999999999999988876532111100 00000
Q ss_pred c---ccc-ccCCC--C-------hHHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 269 T---DSC-LEGQF--S-------SDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 269 ~---~~~-~~~~~--~-------~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
. +-. ....+ + +...++..+++.+||+.+|..|.|+..++.|
T Consensus 249 ~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 249 SSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred cccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 0 000 00000 1 1112588999999999999999999999998
|
|
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-42 Score=338.95 Aligned_cols=241 Identities=15% Similarity=0.219 Sum_probs=196.1
Q ss_pred cCCCCCCceEEEEE-eCCCcEEEEEEecCCCC---ccHHHHHHHHHHHhcC-CCCceeeeeeeeeeCCceEEEEecCCCC
Q 011519 64 EHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMPND 138 (484)
Q Consensus 64 ~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~Ey~~~g 138 (484)
.||+|+||.||++. ..+++.||||+++.... .....+..|..++..+ +||||+++++++...+..++||||+++|
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~g 81 (329)
T cd05588 2 VIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSGG 81 (329)
T ss_pred eEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999 45788999999975432 2245688899999998 6999999999999999999999999999
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC----CCcccC
Q 011519 139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYST 214 (484)
Q Consensus 139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~----~~~~~~ 214 (484)
+|.+++. ..+.+++..+..++.||+.||.|||+. |++||||||+|||++.++.+||+|||+++.... .....|
T Consensus 82 ~L~~~~~--~~~~l~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g 158 (329)
T cd05588 82 DLMFHMQ--RQRKLPEEHARFYSAEISLALNFLHER-GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTFCG 158 (329)
T ss_pred CHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHeEECCCCCEEECcCccccccccCCCccccccC
Confidence 9999886 345799999999999999999999999 999999999999999999999999999875221 234578
Q ss_pred CCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHH-----hhhccccccccccccCCCChHHHHHHHHHH
Q 011519 215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDL-----IRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289 (484)
Q Consensus 215 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 289 (484)
|+.|+|||++.+..++.++|||||||++|+|+||+.||....... ........+... ...+|...+..+.+++
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~p~~~~~~~~~li 236 (329)
T cd05588 159 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEK--QIRIPRSLSVKASSVL 236 (329)
T ss_pred CccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcC--CCCCCCCCCHHHHHHH
Confidence 999999999998889999999999999999999999885211100 000000001111 1124455678899999
Q ss_pred HHHhccCCCCCCC------hHHHHHH
Q 011519 290 SRCLQYEPRERPN------PRSLVTA 309 (484)
Q Consensus 290 ~~cl~~dp~~Rps------~~~il~~ 309 (484)
.+||+.||.+||| +.++++|
T Consensus 237 ~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05588 237 KGFLNKDPKERLGCHPQTGFRDIKSH 262 (329)
T ss_pred HHHhccCHHHcCCCCCCCCHHHHhcC
Confidence 9999999999997 6788777
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-42 Score=324.48 Aligned_cols=247 Identities=23% Similarity=0.351 Sum_probs=202.7
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCC
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~ 136 (484)
.++.+++.||+|+||+||++...++..||||.+..... ....|.+|+.++.+++||||+++++++...+..++||||+.
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS 82 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcc-cHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence 46788899999999999999977777899999875432 34679999999999999999999999998889999999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCC-----c
Q 011519 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-----S 211 (484)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~-----~ 211 (484)
+|+|.+++... ...+++..++.++.||+.||.|||+. |++|+||||+||+++.++.+||+|||.++...... .
T Consensus 83 ~~~l~~~i~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~ 160 (256)
T cd05113 83 NGCLLNYLREH-GKRFQPSQLLEMCKDVCEGMAYLESK-QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVG 160 (256)
T ss_pred CCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccccCcceEEEcCCCCEEECCCccceecCCCceeecCC
Confidence 99999999643 23689999999999999999999999 99999999999999999999999999987654322 1
Q ss_pred ccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHH
Q 011519 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (484)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (484)
..++..|++||++.+..++.++||||||+++|+|+| |..|+................ ....+...+..+.+++.
T Consensus 161 ~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~li~ 235 (256)
T cd05113 161 SKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGL-----RLYRPHLASEKVYAIMY 235 (256)
T ss_pred CccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCC-----CCCCCCCCCHHHHHHHH
Confidence 234567999999988889999999999999999999 887765332221111111111 11122334678999999
Q ss_pred HHhccCCCCCCChHHHHHHHH
Q 011519 291 RCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~l~ 311 (484)
+||+.+|.+|||+.+++..|+
T Consensus 236 ~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 236 SCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred HHcCCCcccCCCHHHHHHhhC
Confidence 999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-43 Score=340.59 Aligned_cols=238 Identities=17% Similarity=0.192 Sum_probs=197.0
Q ss_pred ccCCCCCCceEEEEEe----CCCcEEEEEEecCCCCc--cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCC
Q 011519 63 SEHGEKAPNVVYKGKL----ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (484)
Q Consensus 63 ~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~ 136 (484)
+.||+|+||.||++.. .+|+.||||++...... ....+.+|+.++++++||||+++++++...+..++||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5679999999999974 35789999999754322 24457889999999999999999999999999999999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----Ccc
Q 011519 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSY 212 (484)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~----~~~ 212 (484)
+|+|.+++. ....+++..+..++.||+.||.|||+. |++||||||+|||++.++.+||+|||++...... ...
T Consensus 82 ~~~L~~~l~--~~~~l~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~ 158 (318)
T cd05582 82 GGDLFTRLS--KEVMFTEEDVKFYLAELALALDHLHSL-GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF 158 (318)
T ss_pred CCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCceecc
Confidence 999999996 345689999999999999999999999 9999999999999999999999999998765433 245
Q ss_pred cCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHH
Q 011519 213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRC 292 (484)
Q Consensus 213 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 292 (484)
.||+.|+|||.+.+..++.++|||||||++|+|+||+.||.............. . ...++...++.+.+|+.+|
T Consensus 159 ~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~----~--~~~~p~~~~~~~~~li~~~ 232 (318)
T cd05582 159 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILK----A--KLGMPQFLSPEAQSLLRAL 232 (318)
T ss_pred cCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHc----C--CCCCCCCCCHHHHHHHHHH
Confidence 689999999999988899999999999999999999998865432222111111 1 1123455678899999999
Q ss_pred hccCCCCCCCh-----HHHHHH
Q 011519 293 LQYEPRERPNP-----RSLVTA 309 (484)
Q Consensus 293 l~~dp~~Rps~-----~~il~~ 309 (484)
|+.||.+|||+ .+++.+
T Consensus 233 l~~~P~~R~~a~~~~~~~~~~~ 254 (318)
T cd05582 233 FKRNPANRLGAGPDGVEEIKRH 254 (318)
T ss_pred hhcCHhHcCCCCCCCHHHHhCC
Confidence 99999999994 445554
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-42 Score=328.60 Aligned_cols=251 Identities=23% Similarity=0.353 Sum_probs=203.2
Q ss_pred CCcccccccCCCCCCceEEEEEe-----CCCcEEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceE
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 129 (484)
++++++++.||+|+||+||+|+. .++..|++|.+...... ....+.+|+.+++.++||||+++++++......+
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 83 (283)
T cd05090 4 LSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVC 83 (283)
T ss_pred hhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceE
Confidence 45678889999999999999983 34678999999754322 3457889999999999999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCC---------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCC
Q 011519 130 LVAEYMPNDTLAKHLFHWE---------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN 194 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~~~---------------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~ 194 (484)
+||||+++++|.+++.... ...+++.++..++.|++.||.|||+. |++|+||||+|||+++++.
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~-~i~H~dlkp~nili~~~~~ 162 (283)
T cd05090 84 MLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH-FFVHKDLAARNILIGEQLH 162 (283)
T ss_pred EEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc-CeehhccccceEEEcCCCc
Confidence 9999999999999985221 23478899999999999999999999 9999999999999999999
Q ss_pred ceeeccCCccccCCC------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccc
Q 011519 195 PRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQT 267 (484)
Q Consensus 195 ~kl~DfG~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~ 267 (484)
+||+|||+++..... ....++..|+|||++.+..++.++||||||+++|||++ |..||.......+.......
T Consensus 163 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~ 242 (283)
T cd05090 163 VKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRKR 242 (283)
T ss_pred EEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC
Confidence 999999998764322 23344667999999988889999999999999999999 77776543222211111111
Q ss_pred cccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHh
Q 011519 268 LTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVT 312 (484)
Q Consensus 268 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~ 312 (484)
. ....+..+++.+.+++.+||+.||.+||++.+|+++|..
T Consensus 243 ~-----~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 243 Q-----LLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred C-----cCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 1 112334456789999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-42 Score=340.59 Aligned_cols=249 Identities=18% Similarity=0.281 Sum_probs=195.6
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCC--CccHHHHHHHHHHHhcCCCCceeeeeeeeeeC-----CceE
Q 011519 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEG-----DERL 129 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-----~~~~ 129 (484)
+|++.+.||+|+||.||+|+ ..++..||||++.... .....++.+|+.+++.++||||+++++++... ...+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 36778889999999999999 4578999999987432 22345789999999999999999999988543 2479
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC
Q 011519 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 209 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 209 (484)
+||||+. ++|.+++. ....+++..+..++.||+.||.|||+. ||+||||||+|||++.++.+||+|||+++.....
T Consensus 81 lv~e~~~-~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~ 156 (338)
T cd07859 81 VVFELME-SDLHQVIK--ANDDLTPEHHQFFLYQLLRALKYIHTA-NVFHRDLKPKNILANADCKLKICDFGLARVAFND 156 (338)
T ss_pred EEEecCC-CCHHHHHH--hcccCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEECCCCcEEEccCccccccccc
Confidence 9999995 68999986 345699999999999999999999999 9999999999999999999999999998754321
Q ss_pred -------CcccCCCCCCCcccccC--CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHh-------------------h
Q 011519 210 -------RSYSTNLAFTPPEYLRT--GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLI-------------------R 261 (484)
Q Consensus 210 -------~~~~~t~~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~-------------------~ 261 (484)
....+|+.|+|||++.+ ..++.++|||||||++|+|+||+.||........ .
T Consensus 157 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 236 (338)
T cd07859 157 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVR 236 (338)
T ss_pred cCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhh
Confidence 23468899999999876 5689999999999999999999988864321100 0
Q ss_pred hcccccccc---ccccCC---CChHHHHHHHHHHHHHhccCCCCCCChHHHHHHH
Q 011519 262 DRNIQTLTD---SCLEGQ---FSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 262 ~~~~~~~~~---~~~~~~---~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 310 (484)
......... ...... ..+..++.+.+++.+||+.||++|||+.++++|-
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp 291 (338)
T cd07859 237 NEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADP 291 (338)
T ss_pred hhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCc
Confidence 000000000 000000 0112456789999999999999999999999883
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-43 Score=310.86 Aligned_cols=249 Identities=18% Similarity=0.247 Sum_probs=205.1
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCC-ccHHHHHHHHHHHhcCC-CCceeeeeeeeeeCCceEEEEec
Q 011519 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVAEY 134 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~lv~Ey 134 (484)
+.++++.||.|+.|.|++++ ..+|...|||.+.+... ...++++..++++.... +|.||+++|+|..+..++|.||.
T Consensus 93 dl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMel 172 (391)
T KOG0983|consen 93 DLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMEL 172 (391)
T ss_pred HhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHH
Confidence 44677889999999999999 55689999999987653 34677888999887764 89999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC---Cc
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---RS 211 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~---~~ 211 (484)
|. ..++.++++ -.+++++..+-++...++.||.||.++++|+|||+||+|||+|+.|++||||||++....++ +.
T Consensus 173 Ms-~C~ekLlkr-ik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAhtr 250 (391)
T KOG0983|consen 173 MS-TCAEKLLKR-IKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAHTR 250 (391)
T ss_pred HH-HHHHHHHHH-hcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeeccccccc
Confidence 84 366666643 45679999999999999999999999999999999999999999999999999999876554 45
Q ss_pred ccCCCCCCCcccccCC---CCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHH
Q 011519 212 YSTNLAFTPPEYLRTG---RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288 (484)
Q Consensus 212 ~~~t~~y~aPE~~~~~---~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 288 (484)
..|.+.|||||.+.-. .|+-++||||||++|+||.||..|+.....++..-..+..-.++.+++ ...+++.+.+|
T Consensus 251 sAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~ePP~L~~--~~gFSp~F~~f 328 (391)
T KOG0983|consen 251 SAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEPPLLPG--HMGFSPDFQSF 328 (391)
T ss_pred ccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCCCCCCc--ccCcCHHHHHH
Confidence 6788999999999743 489999999999999999999999987544433222222211233222 12378899999
Q ss_pred HHHHhccCCCCCCChHHHHHHH
Q 011519 289 ASRCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 289 i~~cl~~dp~~Rps~~~il~~l 310 (484)
+..||.+|+.+||.+.++++|-
T Consensus 329 v~~CL~kd~r~RP~Y~~Ll~h~ 350 (391)
T KOG0983|consen 329 VKDCLTKDHRKRPKYNKLLEHP 350 (391)
T ss_pred HHHHhhcCcccCcchHHHhcCc
Confidence 9999999999999999999884
|
|
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-42 Score=324.96 Aligned_cols=255 Identities=16% Similarity=0.199 Sum_probs=207.4
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCC---ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEE
Q 011519 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 132 (484)
.+|.+.+.||.|+||.||+|+ ..+++.||||.+..... .....+.+|+.+++.++||||+++++++...+..++||
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 456788889999999999999 55789999998864322 22456889999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-
Q 011519 133 EYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 209 (484)
Q Consensus 133 Ey~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~- 209 (484)
||+++|+|.+++... ....+++..+..++.||+.||.|||+. +++|+||||+||+++.++.++|+|||++......
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~-~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~ 160 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR-RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT 160 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC-CeeCCCCCHHHEEEcCCCCEEECccccceeccchh
Confidence 999999999988532 234588999999999999999999998 9999999999999999999999999998765432
Q ss_pred ---CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHH
Q 011519 210 ---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 286 (484)
Q Consensus 210 ---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 286 (484)
....+++.|+|||.+.+..++.++|+||||+++|+|++|+.|+.....+.... ...+.........+...+..+.
T Consensus 161 ~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 238 (267)
T cd08228 161 TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSL--CQKIEQCDYPPLPTEHYSEKLR 238 (267)
T ss_pred HHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHH--HHHHhcCCCCCCChhhcCHHHH
Confidence 23467889999999988889999999999999999999999875442211110 0000000111112234567899
Q ss_pred HHHHHHhccCCCCCCChHHHHHHHHhhh
Q 011519 287 RLASRCLQYEPRERPNPRSLVTALVTLQ 314 (484)
Q Consensus 287 ~li~~cl~~dp~~Rps~~~il~~l~~~~ 314 (484)
+++.+||..+|++|||+.++++.|++++
T Consensus 239 ~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 239 ELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred HHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 9999999999999999999999998764
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-42 Score=338.20 Aligned_cols=253 Identities=21% Similarity=0.316 Sum_probs=201.6
Q ss_pred cccccccCCCCCCceEEEEEe------CCCcEEEEEEecCCCCc-cHHHHHHHHHHHhcC-CCCceeeeeeeeeeC-Cce
Q 011519 58 MENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQL-RNRRLANLLGCCCEG-DER 128 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~-~~~ 128 (484)
+|++++.||.|+||.||+|.. .+++.||+|+++..... ..+.+.+|+.++.++ +||||+++++++... ...
T Consensus 8 ~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~ 87 (337)
T cd05054 8 RLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGPL 87 (337)
T ss_pred HhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCCE
Confidence 678889999999999999963 23478999999754322 245688999999999 799999999988654 568
Q ss_pred EEEEecCCCCCHHhhhccCC-----------------------------------------------------------C
Q 011519 129 LLVAEYMPNDTLAKHLFHWE-----------------------------------------------------------T 149 (484)
Q Consensus 129 ~lv~Ey~~~gsL~~~l~~~~-----------------------------------------------------------~ 149 (484)
+++|||+++|+|.++|.... .
T Consensus 88 ~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (337)
T cd05054 88 MVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYK 167 (337)
T ss_pred EEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHhh
Confidence 89999999999999985321 1
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC------CcccCCCCCCCccc
Q 011519 150 QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEY 223 (484)
Q Consensus 150 ~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~------~~~~~t~~y~aPE~ 223 (484)
.++++..+..++.||+.||.|||+. ||+||||||+|||++.++.++|+|||++...... ....++..|+|||+
T Consensus 168 ~~l~~~~~~~~~~qi~~aL~~lH~~-~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~ 246 (337)
T cd05054 168 EPLTLEDLISYSFQVARGMEFLASR-KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPES 246 (337)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcHH
Confidence 2689999999999999999999998 9999999999999999999999999999865322 22344678999999
Q ss_pred ccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHHhccCCCCCCC
Q 011519 224 LRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPN 302 (484)
Q Consensus 224 ~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 302 (484)
+.+..++.++|||||||++|||++ |..||............+ ........+...++++.+++.+||+.+|++||+
T Consensus 247 ~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs 322 (337)
T cd05054 247 IFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRL----KEGTRMRAPEYATPEIYSIMLDCWHNNPEDRPT 322 (337)
T ss_pred hcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHH----hccCCCCCCccCCHHHHHHHHHHccCChhhCcC
Confidence 999999999999999999999998 887775422111100000 011111223445678999999999999999999
Q ss_pred hHHHHHHHHhhhc
Q 011519 303 PRSLVTALVTLQK 315 (484)
Q Consensus 303 ~~~il~~l~~~~~ 315 (484)
+.+++++|..+.+
T Consensus 323 ~~ell~~l~~~~~ 335 (337)
T cd05054 323 FSELVEILGDLLQ 335 (337)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999988654
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-42 Score=341.47 Aligned_cols=249 Identities=16% Similarity=0.146 Sum_probs=201.6
Q ss_pred CCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCC---ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEE
Q 011519 55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (484)
Q Consensus 55 ~f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 130 (484)
.-..|++++.||+|+||.||++.. .+++.||+|++..... .....+.+|+.+++.++||||+++++++.+++..++
T Consensus 41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~l 120 (370)
T cd05621 41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYM 120 (370)
T ss_pred CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEE
Confidence 345788899999999999999994 5688999999864221 224458899999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-
Q 011519 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 209 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~- 209 (484)
||||+++|+|.+++. ...+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||++......
T Consensus 121 v~Ey~~gg~L~~~l~---~~~~~~~~~~~~~~qil~aL~~LH~~-~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~ 196 (370)
T cd05621 121 VMEYMPGGDLVNLMS---NYDVPEKWAKFYTAEVVLALDAIHSM-GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETG 196 (370)
T ss_pred EEcCCCCCcHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHEEECCCCCEEEEecccceecccCC
Confidence 999999999999995 33589999999999999999999999 9999999999999999999999999999865432
Q ss_pred ----CcccCCCCCCCcccccCC----CCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCC--h
Q 011519 210 ----RSYSTNLAFTPPEYLRTG----RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFS--S 279 (484)
Q Consensus 210 ----~~~~~t~~y~aPE~~~~~----~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 279 (484)
....||+.|+|||++.+. .++.++|||||||++|+|++|..||............. .......++ .
T Consensus 197 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~----~~~~~~~~p~~~ 272 (370)
T cd05621 197 MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIM----DHKNSLNFPEDV 272 (370)
T ss_pred ceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHH----hCCcccCCCCcc
Confidence 245689999999998754 37889999999999999999999987543322211111 111011122 2
Q ss_pred HHHHHHHHHHHHHhccCCCC--CCChHHHHHHHH
Q 011519 280 DEGTELVRLASRCLQYEPRE--RPNPRSLVTALV 311 (484)
Q Consensus 280 ~~~~~l~~li~~cl~~dp~~--Rps~~~il~~l~ 311 (484)
..+..+.+++..||..++.+ |+|+.++++|-+
T Consensus 273 ~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~ 306 (370)
T cd05621 273 EISKHAKNLICAFLTDREVRLGRNGVEEIKQHPF 306 (370)
T ss_pred cCCHHHHHHHHHHccCchhccCCCCHHHHhcCcc
Confidence 34678999999999865544 899999999854
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-42 Score=323.25 Aligned_cols=249 Identities=21% Similarity=0.322 Sum_probs=206.0
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCC
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~ 136 (484)
..+++++.||+|+||.||+|...+++.||||.++... ...+.+.+|+.++++++||||+++++++...+..++||||++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 84 (261)
T cd05068 6 TSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMK 84 (261)
T ss_pred hheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeeccc
Confidence 3567788899999999999997777889999997654 235679999999999999999999999999999999999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCC--cccC
Q 011519 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR--SYST 214 (484)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~--~~~~ 214 (484)
+++|.+++.......+++..+..++.|++.||.|||+. |++|+||||+||++++++.++|+|||++....... ...+
T Consensus 85 ~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 163 (261)
T cd05068 85 YGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQ-NYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAREG 163 (261)
T ss_pred CCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeccCCcceEEEcCCCCEEECCcceEEEccCCcccccCC
Confidence 99999999754445689999999999999999999998 99999999999999999999999999988754321 1122
Q ss_pred ---CCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHH
Q 011519 215 ---NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (484)
Q Consensus 215 ---t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (484)
+..|+|||++.+..++.++||||||+++|+|+| |+.||............... .....+...+..+.+++.
T Consensus 164 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~ 238 (261)
T cd05068 164 AKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQG-----YRMPCPPGCPKELYDIML 238 (261)
T ss_pred CcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC-----CCCCCCCcCCHHHHHHHH
Confidence 357999999998889999999999999999999 88777553322211111111 111223445678999999
Q ss_pred HHhccCCCCCCChHHHHHHHHh
Q 011519 291 RCLQYEPRERPNPRSLVTALVT 312 (484)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~l~~ 312 (484)
+||+.+|++||++.+++..|+.
T Consensus 239 ~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 239 DCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred HHhhcCcccCCCHHHHHHHHhc
Confidence 9999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-42 Score=353.94 Aligned_cols=248 Identities=17% Similarity=0.207 Sum_probs=205.1
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCc--cHHHHHHHHHHHhcCCCCceeeeeeeeeeCC-------
Q 011519 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGD------- 126 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~------- 126 (484)
.+|.+.+.||+|+||+||+|. ..+++.||||++...... ....+.+|+.++..++|+||+++++.+...+
T Consensus 32 ~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~ 111 (496)
T PTZ00283 32 KKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENV 111 (496)
T ss_pred CCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccc
Confidence 477888889999999999999 567999999999765332 3456889999999999999999988775432
Q ss_pred -ceEEEEecCCCCCHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCc
Q 011519 127 -ERLLVAEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLM 203 (484)
Q Consensus 127 -~~~lv~Ey~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a 203 (484)
.+++||||+++|+|.++|... ....+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 112 ~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~-~IiHrDLKP~NILl~~~~~vkL~DFGls 190 (496)
T PTZ00283 112 LMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK-HMIHRDIKSANILLCSNGLVKLGDFGFS 190 (496)
T ss_pred eEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEEeCCCCEEEEecccC
Confidence 368999999999999998642 235689999999999999999999999 9999999999999999999999999998
Q ss_pred cccCC------CCcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCC
Q 011519 204 KNSRD------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQF 277 (484)
Q Consensus 204 ~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (484)
+.... .....||+.|+|||++.+..++.++|||||||++|||++|+.||................ ....
T Consensus 191 ~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~-----~~~~ 265 (496)
T PTZ00283 191 KMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGR-----YDPL 265 (496)
T ss_pred eeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCC-----CCCC
Confidence 76432 234578999999999998889999999999999999999999987543332222211111 1123
Q ss_pred ChHHHHHHHHHHHHHhccCCCCCCChHHHHHHH
Q 011519 278 SSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 278 ~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 310 (484)
+...++++.+++.+||..||.+|||+.+++++.
T Consensus 266 ~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p 298 (496)
T PTZ00283 266 PPSISPEMQEIVTALLSSDPKRRPSSSKLLNMP 298 (496)
T ss_pred CCCCCHHHHHHHHHHcccChhhCcCHHHHHhCH
Confidence 455678899999999999999999999999873
|
|
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-42 Score=329.25 Aligned_cols=252 Identities=20% Similarity=0.270 Sum_probs=203.7
Q ss_pred CCCcccccccCCCCCCceEEEEEeC------CCcEEEEEEecCCCCcc-HHHHHHHHHHHhcCCCCceeeeeeeeeeCCc
Q 011519 55 GFAMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWPD-ARQFLEEARAVGQLRNRRLANLLGCCCEGDE 127 (484)
Q Consensus 55 ~f~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~ 127 (484)
+++.++++++||.|+||+||+|... .+..||||+++...... .+.|.+|+.++..++||||+++++++...+.
T Consensus 3 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~ 82 (283)
T cd05091 3 NLSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQP 82 (283)
T ss_pred CHHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCc
Confidence 3456788899999999999999842 25789999997654332 4568899999999999999999999999999
Q ss_pred eEEEEecCCCCCHHhhhccC--------------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCC
Q 011519 128 RLLVAEYMPNDTLAKHLFHW--------------ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV 193 (484)
Q Consensus 128 ~~lv~Ey~~~gsL~~~l~~~--------------~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~ 193 (484)
.++++||+++++|.+++... ....+++..+..++.|++.||.|||+. |++||||||+|||+++++
T Consensus 83 ~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~-gi~H~dlkp~Nil~~~~~ 161 (283)
T cd05091 83 LSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH-HVVHKDLATRNVLVFDKL 161 (283)
T ss_pred eEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc-CccccccchhheEecCCC
Confidence 99999999999999998421 123588899999999999999999998 999999999999999999
Q ss_pred CceeeccCCccccCCC------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhcccc
Q 011519 194 NPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQ 266 (484)
Q Consensus 194 ~~kl~DfG~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~ 266 (484)
.+||+|||+++..... ....+++.|+|||++.++.++.++|||||||++|||++ |..|+..............
T Consensus 162 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i~~ 241 (283)
T cd05091 162 NVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRN 241 (283)
T ss_pred ceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc
Confidence 9999999998764332 12334678999999988889999999999999999998 6666544322211111111
Q ss_pred ccccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHh
Q 011519 267 TLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVT 312 (484)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~ 312 (484)
......+..++..+.+|+..||+.+|.+||++.+|+..|+.
T Consensus 242 -----~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 242 -----RQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred -----CCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 11112345567889999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-42 Score=335.92 Aligned_cols=237 Identities=19% Similarity=0.232 Sum_probs=194.7
Q ss_pred cCCCCCCceEEEEEe-CCCcEEEEEEecCCC---CccHHHHHHHHHHHhcC-CCCceeeeeeeeeeCCceEEEEecCCCC
Q 011519 64 EHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMPND 138 (484)
Q Consensus 64 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~Ey~~~g 138 (484)
.||+|+||+||+|.. .+++.||||+++... ......+..|..++..+ +||||+++++++.+.+..++||||+++|
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~g 81 (316)
T cd05619 2 MLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNGG 81 (316)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCCC
Confidence 579999999999995 568899999997542 12345577788888764 8999999999999999999999999999
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC----CCcccC
Q 011519 139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYST 214 (484)
Q Consensus 139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~----~~~~~~ 214 (484)
+|.+++. ....+++.++..++.||+.||.|||+. |++||||||+|||++.++.+||+|||++..... .....|
T Consensus 82 ~L~~~l~--~~~~~~~~~~~~~~~qi~~al~~LH~~-~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 158 (316)
T cd05619 82 DLMFHIQ--SCHKFDLPRATFYAAEIICGLQFLHSK-GIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFCG 158 (316)
T ss_pred cHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhC-CeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceeeecC
Confidence 9999996 345689999999999999999999998 999999999999999999999999999875322 234568
Q ss_pred CCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHHhc
Q 011519 215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ 294 (484)
Q Consensus 215 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 294 (484)
|+.|+|||++.+..++.++|||||||++|+|++|..||.............. . ...++...+.++.+|+.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~--~----~~~~~~~~~~~~~~li~~~l~ 232 (316)
T cd05619 159 TPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRM--D----NPCYPRWLTREAKDILVKLFV 232 (316)
T ss_pred CccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh--C----CCCCCccCCHHHHHHHHHHhc
Confidence 9999999999988899999999999999999999998865432222111100 0 112334456789999999999
Q ss_pred cCCCCCCChH-HHHHH
Q 011519 295 YEPRERPNPR-SLVTA 309 (484)
Q Consensus 295 ~dp~~Rps~~-~il~~ 309 (484)
.||++||++. +++.|
T Consensus 233 ~~P~~R~~~~~~l~~h 248 (316)
T cd05619 233 REPERRLGVKGDIRQH 248 (316)
T ss_pred cCHhhcCCChHHHHcC
Confidence 9999999997 66655
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-43 Score=332.91 Aligned_cols=244 Identities=27% Similarity=0.455 Sum_probs=194.1
Q ss_pred ccccCCCCCCceEEEEEeC-----CCcEEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEec
Q 011519 61 IVSEHGEKAPNVVYKGKLE-----NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (484)
Q Consensus 61 ~~~~lG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey 134 (484)
+.+.||.|+||.||+|.+. .+..|+||.++..... ..+.|.+|++.+++++||||++++|++...+..++||||
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~ 82 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY 82 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence 4567899999999999964 3678999999664333 367899999999999999999999999988889999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-----
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----- 209 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~----- 209 (484)
+++|+|.++|.......+++..++.|+.||+.||.|||+. +++|+||+++|||+++++.+||+|||++......
T Consensus 83 ~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~-~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~~ 161 (259)
T PF07714_consen 83 CPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSN-NIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYKN 161 (259)
T ss_dssp -TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHT-TEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEEE
T ss_pred cccccccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999865467799999999999999999999999 9999999999999999999999999998876322
Q ss_pred -CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHH
Q 011519 210 -RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287 (484)
Q Consensus 210 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (484)
........|+|||.+.+..++.++||||||+++|||+| |+.|+.......+.... ........+..++..+.+
T Consensus 162 ~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 236 (259)
T PF07714_consen 162 DSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKL-----KQGQRLPIPDNCPKDIYS 236 (259)
T ss_dssp STTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHH-----HTTEETTSBTTSBHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-----cccccceeccchhHHHHH
Confidence 22345678999999998889999999999999999999 56665443222211111 111112234456788999
Q ss_pred HHHHHhccCCCCCCChHHHHHHH
Q 011519 288 LASRCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 288 li~~cl~~dp~~Rps~~~il~~l 310 (484)
++..||..||++|||+.++++.|
T Consensus 237 li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 237 LIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp HHHHHT-SSGGGS--HHHHHHHH
T ss_pred HHHHHcCCChhhCcCHHHHHhcC
Confidence 99999999999999999999876
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-42 Score=325.69 Aligned_cols=250 Identities=17% Similarity=0.181 Sum_probs=203.3
Q ss_pred CCcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEec
Q 011519 56 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey 134 (484)
..+|++++.||+|+||.||+|+ ..+++.||+|++..........+.+|+.++++++||||+++++++...+..++||||
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~ 87 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY 87 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence 4578899999999999999999 467889999999765444556788999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----C
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----R 210 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~----~ 210 (484)
+++++|.+++. ..+.+++..+..++.|++.||.|||+. |++|+||||+||+++.++.++|+|||++...... .
T Consensus 88 ~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~ 164 (267)
T cd06646 88 CGGGSLQDIYH--VTGPLSELQIAYVCRETLQGLAYLHSK-GKMHRDIKGANILLTDNGDVKLADFGVAAKITATIAKRK 164 (267)
T ss_pred CCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEECCCCCEEECcCccceeecccccccC
Confidence 99999999986 345789999999999999999999998 9999999999999999999999999998765322 2
Q ss_pred cccCCCCCCCccccc---CCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhc-cccccccccccCCCChHHHHHHH
Q 011519 211 SYSTNLAFTPPEYLR---TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR-NIQTLTDSCLEGQFSSDEGTELV 286 (484)
Q Consensus 211 ~~~~t~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~ 286 (484)
...+++.|+|||.+. ...++.++|||||||++|||++|+.|+........... .......+.. ......+..+.
T Consensus 165 ~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 242 (267)
T cd06646 165 SFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKL--KDKTKWSSTFH 242 (267)
T ss_pred ccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCCC--ccccccCHHHH
Confidence 346788999999985 34478899999999999999999987643221110000 0000011111 11223567899
Q ss_pred HHHHHHhccCCCCCCChHHHHHHH
Q 011519 287 RLASRCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 287 ~li~~cl~~dp~~Rps~~~il~~l 310 (484)
+++.+||..+|++|||+++++++|
T Consensus 243 ~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 243 NFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred HHHHHHhhCChhhCcCHHHHhcCC
Confidence 999999999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-42 Score=336.91 Aligned_cols=241 Identities=16% Similarity=0.213 Sum_probs=195.3
Q ss_pred cCCCCCCceEEEEE-eCCCcEEEEEEecCCCC---ccHHHHHHHHHHHhcC-CCCceeeeeeeeeeCCceEEEEecCCCC
Q 011519 64 EHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMPND 138 (484)
Q Consensus 64 ~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~Ey~~~g 138 (484)
.||+|+||+||+|. ..+++.||+|+++.... .....+..|+.++.++ +||||+++++++...+..++||||+++|
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~~ 81 (329)
T cd05618 2 VIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGG 81 (329)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCCC
Confidence 46999999999999 45688999999975422 2345577899988877 7999999999999999999999999999
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC----CCcccC
Q 011519 139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYST 214 (484)
Q Consensus 139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~----~~~~~~ 214 (484)
+|..++. ..+.+++..+..++.||+.||.|||+. |++||||||+|||++.++.+||+|||+++.... .....|
T Consensus 82 ~L~~~~~--~~~~l~~~~~~~i~~qi~~~l~~lH~~-~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~~~g 158 (329)
T cd05618 82 DLMFHMQ--RQRKLPEEHARFYSAEISLALNYLHER-GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCG 158 (329)
T ss_pred CHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCccccccC
Confidence 9999886 345799999999999999999999999 999999999999999999999999999875322 234568
Q ss_pred CCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHh-----hhccccccccccccCCCChHHHHHHHHHH
Q 011519 215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLI-----RDRNIQTLTDSCLEGQFSSDEGTELVRLA 289 (484)
Q Consensus 215 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~~li 289 (484)
|+.|+|||++.+..++.++|||||||++|+|++|+.||........ .......+... ...+|...+..+.+|+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~--~~~~p~~~~~~~~~ll 236 (329)
T cd05618 159 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK--QIRIPRSLSVKAASVL 236 (329)
T ss_pred CccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcC--CCCCCCCCCHHHHHHH
Confidence 9999999999988899999999999999999999998742110000 00000000111 1234556678899999
Q ss_pred HHHhccCCCCCCC------hHHHHHH
Q 011519 290 SRCLQYEPRERPN------PRSLVTA 309 (484)
Q Consensus 290 ~~cl~~dp~~Rps------~~~il~~ 309 (484)
.+||..||++||+ +.++++|
T Consensus 237 ~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05618 237 KSFLNKDPKERLGCHPQTGFADIQGH 262 (329)
T ss_pred HHHhcCCHHHcCCCCCCCCHHHHhcC
Confidence 9999999999998 4677776
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-42 Score=339.67 Aligned_cols=252 Identities=18% Similarity=0.209 Sum_probs=205.1
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCC-C-----CceeeeeeeeeeCCceEE
Q 011519 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-N-----RRLANLLGCCCEGDERLL 130 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h-----pniv~l~~~~~~~~~~~l 130 (484)
+|.|++.||+|+||.|-+|+ ..+++.||||+++... .-..+-..|+.+|..|+ | -|+|+++++|...++.+|
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k-~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci 265 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK-RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI 265 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh-HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence 46788999999999999999 6789999999998653 33556778999999997 4 389999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCC--CCceeeccCCccccCC
Q 011519 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD--VNPRLSCFGLMKNSRD 208 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~--~~~kl~DfG~a~~~~~ 208 (484)
|+|.+.. +|.++|+.+.-..++...+..++.||+.||.+||+. +|||+||||+||||.+- ..|||+|||.++....
T Consensus 266 VfELL~~-NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l-~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q 343 (586)
T KOG0667|consen 266 VFELLST-NLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHEL-GIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQ 343 (586)
T ss_pred eehhhhh-hHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeccCChhheeeccCCcCceeEEecccccccCC
Confidence 9999955 999999988888899999999999999999999998 99999999999999743 4699999999998766
Q ss_pred C-CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHh----------------h-hcccccccc
Q 011519 209 G-RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLI----------------R-DRNIQTLTD 270 (484)
Q Consensus 209 ~-~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~----------------~-~~~~~~~~~ 270 (484)
. -++..+..|+|||++.|.+|+.+.||||||||+.||++|.+.|+++..... . ........+
T Consensus 344 ~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~ 423 (586)
T KOG0667|consen 344 RVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFT 423 (586)
T ss_pred cceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehh
Confidence 4 367778999999999999999999999999999999999988876411100 0 000000000
Q ss_pred c-----------------------------cccCCCC-----------hHHHHHHHHHHHHHhccCCCCCCChHHHHHHH
Q 011519 271 S-----------------------------CLEGQFS-----------SDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 271 ~-----------------------------~~~~~~~-----------~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 310 (484)
. ......| ......+.+|+.+||..||.+|+|..++++|-
T Consensus 424 ~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hp 503 (586)
T KOG0667|consen 424 SLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHP 503 (586)
T ss_pred ccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCc
Confidence 0 0000011 12346789999999999999999999999995
Q ss_pred Hh
Q 011519 311 VT 312 (484)
Q Consensus 311 ~~ 312 (484)
+-
T Consensus 504 fl 505 (586)
T KOG0667|consen 504 FL 505 (586)
T ss_pred cc
Confidence 43
|
|
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-42 Score=337.10 Aligned_cols=237 Identities=20% Similarity=0.227 Sum_probs=193.0
Q ss_pred cCCCCCCceEEEEEe-CCCcEEEEEEecCCCC---ccHHHHHHHHH-HHhcCCCCceeeeeeeeeeCCceEEEEecCCCC
Q 011519 64 EHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEAR-AVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 138 (484)
Q Consensus 64 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~-~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~~g 138 (484)
.||+|+||+||+|.. .+|+.||||++..... .....+..|.. +++.++||||+++++.+...+..++||||+++|
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~g 81 (323)
T cd05575 2 VIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNGG 81 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCCC
Confidence 479999999999994 5789999999965321 12344556655 467789999999999999999999999999999
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC----CCcccC
Q 011519 139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYST 214 (484)
Q Consensus 139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~----~~~~~~ 214 (484)
+|..++. ..+.+++..+..++.||+.||.|||+. |++||||||+|||++.++.+||+|||++..... .....|
T Consensus 82 ~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~-givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 158 (323)
T cd05575 82 ELFFHLQ--RERSFPEPRARFYAAEIASALGYLHSL-NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCG 158 (323)
T ss_pred CHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCccccccC
Confidence 9999986 345789999999999999999999999 999999999999999999999999999875322 234568
Q ss_pred CCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHHhc
Q 011519 215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ 294 (484)
Q Consensus 215 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 294 (484)
|+.|+|||++.+..++.++|||||||++|+|++|..||................ ...+...+..+.+++.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~------~~~~~~~~~~~~~li~~~l~ 232 (323)
T cd05575 159 TPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKP------LRLKPNISVSARHLLEGLLQ 232 (323)
T ss_pred ChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCC------CCCCCCCCHHHHHHHHHHhh
Confidence 999999999998889999999999999999999999887543322211111110 11233457889999999999
Q ss_pred cCCCCCCChH----HHHHH
Q 011519 295 YEPRERPNPR----SLVTA 309 (484)
Q Consensus 295 ~dp~~Rps~~----~il~~ 309 (484)
.||.+||++. +++++
T Consensus 233 ~~p~~R~~~~~~~~~il~~ 251 (323)
T cd05575 233 KDRTKRLGAKDDFLEIKNH 251 (323)
T ss_pred cCHHhCCCCCCCHHHHHcC
Confidence 9999999884 66654
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-42 Score=322.43 Aligned_cols=248 Identities=23% Similarity=0.337 Sum_probs=204.9
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCC
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~ 136 (484)
..|+++++||+|+||.||+|...+++.||+|.+..... ...+|.+|+.++++++||||+++++++. .+..++||||++
T Consensus 6 ~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~ 83 (260)
T cd05067 6 ETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYME 83 (260)
T ss_pred HHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcCC
Confidence 35788899999999999999988889999999975543 3567999999999999999999999874 467899999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-----Cc
Q 011519 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----RS 211 (484)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~-----~~ 211 (484)
+++|.+++....+..+++.++..++.|++.||+|||+. |++|+||||+||++++++.++|+|||++...... ..
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~-~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~ 162 (260)
T cd05067 84 NGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERK-NYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREG 162 (260)
T ss_pred CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcC-CeecccccHHhEEEcCCCCEEEccCcceeecCCCCcccccC
Confidence 99999998755556789999999999999999999998 9999999999999999999999999998765522 12
Q ss_pred ccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHH
Q 011519 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (484)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (484)
..++..|+|||++.+..++.++||||||+++|+|++ |+.||............. .......+...+.++.+++.
T Consensus 163 ~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~li~ 237 (260)
T cd05067 163 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLE-----RGYRMPRPDNCPEELYELMR 237 (260)
T ss_pred CcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHH-----cCCCCCCCCCCCHHHHHHHH
Confidence 334578999999988889999999999999999999 887775433222111110 11111223445678999999
Q ss_pred HHhccCCCCCCChHHHHHHHHh
Q 011519 291 RCLQYEPRERPNPRSLVTALVT 312 (484)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~l~~ 312 (484)
+||..+|++|||+++++..|+.
T Consensus 238 ~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 238 LCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred HHccCChhhCCCHHHHHHHhhc
Confidence 9999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-43 Score=342.93 Aligned_cols=240 Identities=18% Similarity=0.310 Sum_probs=204.7
Q ss_pred CCCCCCceEEEEE-eCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCCCCCHHhh
Q 011519 65 HGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKH 143 (484)
Q Consensus 65 lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~~gsL~~~ 143 (484)
||+|.||+||.|+ ..+...+|||.+........+-+..|+.+.++|+|.|||+++|.+.+++.+-|.||-++||||.++
T Consensus 583 LGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSsL 662 (1226)
T KOG4279|consen 583 LGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSSL 662 (1226)
T ss_pred eecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHHH
Confidence 6999999999999 567888999999877666677799999999999999999999999999999999999999999999
Q ss_pred hccCCCCCC--CHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeec-CCCCceeeccCCccccCC----CCcccCCC
Q 011519 144 LFHWETQPM--KWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD-DDVNPRLSCFGLMKNSRD----GRSYSTNL 216 (484)
Q Consensus 144 l~~~~~~~l--~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~-~~~~~kl~DfG~a~~~~~----~~~~~~t~ 216 (484)
|.. .=+++ .+.++-.+..||++||.|||++ .|||||||-+||||+ -.|.+||+|||.++.... ..++.||.
T Consensus 663 Lrs-kWGPlKDNEstm~fYtkQILeGLkYLHen-~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETFTGTL 740 (1226)
T KOG4279|consen 663 LRS-KWGPLKDNESTMNFYTKQILEGLKYLHEN-KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETFTGTL 740 (1226)
T ss_pred HHh-ccCCCccchhHHHHHHHHHHHHhhhhhhc-ceeeccccCCcEEEeeccceEEecccccchhhccCCccccccccch
Confidence 964 33456 7889999999999999999999 999999999999997 578999999998876432 46789999
Q ss_pred CCCCcccccCCC--CCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHHhc
Q 011519 217 AFTPPEYLRTGR--VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ 294 (484)
Q Consensus 217 ~y~aPE~~~~~~--~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 294 (484)
.|||||++..+. |..++|||||||++.||.||++||......-.. +..+---...+.+|...+.+...||.+|+.
T Consensus 741 QYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAA---MFkVGmyKvHP~iPeelsaeak~FilrcFe 817 (1226)
T KOG4279|consen 741 QYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAA---MFKVGMYKVHPPIPEELSAEAKNFILRCFE 817 (1226)
T ss_pred hhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHh---hhhhcceecCCCCcHHHHHHHHHHHHHHcC
Confidence 999999998765 899999999999999999999887533211110 111111112346788999999999999999
Q ss_pred cCCCCCCChHHHHHH
Q 011519 295 YEPRERPNPRSLVTA 309 (484)
Q Consensus 295 ~dp~~Rps~~~il~~ 309 (484)
.||.+|||+.+++..
T Consensus 818 pd~~~R~sA~~LL~D 832 (1226)
T KOG4279|consen 818 PDPCDRPSAKDLLQD 832 (1226)
T ss_pred CCcccCccHHHhccC
Confidence 999999999999976
|
|
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-42 Score=328.98 Aligned_cols=254 Identities=23% Similarity=0.320 Sum_probs=206.1
Q ss_pred CcccccccCCCCCCceEEEEEe------CCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 130 (484)
..+.+.+.||.|+||+||++.. .++..+|+|.+........+.+.+|+.++++++||||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 84 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence 3566778889999999999984 2346699999876554456679999999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCC-----------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeec
Q 011519 131 VAEYMPNDTLAKHLFHWE-----------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSC 199 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~~~-----------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~D 199 (484)
||||+++++|.+++.... ...+++..++.++.|++.||.|||+. |++||||||+|||+++++.+||+|
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~-~i~H~dlkp~Nili~~~~~~kl~d 163 (288)
T cd05093 85 VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ-HFVHRDLATRNCLVGENLLVKIGD 163 (288)
T ss_pred EEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeecccCcceEEEccCCcEEecc
Confidence 999999999999986321 23589999999999999999999998 999999999999999999999999
Q ss_pred cCCccccCCC------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhcccccccccc
Q 011519 200 FGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSC 272 (484)
Q Consensus 200 fG~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 272 (484)
||++...... ....+++.|+|||++.+..++.++|||||||++|+|+| |..||.................
T Consensus 164 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~~~--- 240 (288)
T cd05093 164 FGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRV--- 240 (288)
T ss_pred CCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCc---
Confidence 9998765332 12334678999999998889999999999999999999 7777654322221111111111
Q ss_pred ccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhcC
Q 011519 273 LEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316 (484)
Q Consensus 273 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 316 (484)
...+...+..+.+|+.+||+.||.+|||+.+++..|+.+.+.
T Consensus 241 --~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 241 --LQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred --CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 112233457899999999999999999999999999988754
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-42 Score=336.35 Aligned_cols=237 Identities=18% Similarity=0.248 Sum_probs=197.3
Q ss_pred cCCCCCCceEEEEEe-CCCcEEEEEEecCCC---CccHHHHHHHHHHHhcC-CCCceeeeeeeeeeCCceEEEEecCCCC
Q 011519 64 EHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMPND 138 (484)
Q Consensus 64 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~Ey~~~g 138 (484)
.||.|+||+||+|.. .+++.||||+++... ......+..|..++..+ +||||+++++++...+..++||||++||
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 81 (318)
T cd05570 2 VLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNGG 81 (318)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence 579999999999994 568899999997532 12345678899999888 6999999999999999999999999999
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC----CCcccC
Q 011519 139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYST 214 (484)
Q Consensus 139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~----~~~~~~ 214 (484)
+|..++. ..+.+++..+..++.||+.||.|||+. +++||||||+|||++.++.+||+|||+++.... .....|
T Consensus 82 ~L~~~~~--~~~~l~~~~~~~~~~qi~~~l~~LH~~-~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 158 (318)
T cd05570 82 DLMFHIQ--RSGRFDEPRARFYAAEIVLGLQFLHER-GIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFCG 158 (318)
T ss_pred CHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhC-CeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcccceec
Confidence 9999986 345799999999999999999999999 999999999999999999999999999865321 123468
Q ss_pred CCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHHhc
Q 011519 215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ 294 (484)
Q Consensus 215 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 294 (484)
|+.|+|||++.+..++.++|||||||++|+|++|+.||.............. . ...++...+..+.+|+.+||.
T Consensus 159 ~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~----~--~~~~~~~~~~~~~~li~~~l~ 232 (318)
T cd05570 159 TPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILE----D--EVRYPRWLSKEAKSILKSFLT 232 (318)
T ss_pred CccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHc----C--CCCCCCcCCHHHHHHHHHHcc
Confidence 8999999999988999999999999999999999998865432222111111 0 112344567889999999999
Q ss_pred cCCCCCCCh-----HHHHHH
Q 011519 295 YEPRERPNP-----RSLVTA 309 (484)
Q Consensus 295 ~dp~~Rps~-----~~il~~ 309 (484)
.||++|||+ .+++.+
T Consensus 233 ~dP~~R~s~~~~~~~~ll~~ 252 (318)
T cd05570 233 KNPEKRLGCLPTGEQDIKGH 252 (318)
T ss_pred CCHHHcCCCCCCCHHHHhcC
Confidence 999999999 888877
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-42 Score=328.80 Aligned_cols=254 Identities=22% Similarity=0.316 Sum_probs=207.3
Q ss_pred CcccccccCCCCCCceEEEEEe------CCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 130 (484)
.++.+.+.||+|+||.||+|.. .++..+++|.+........+.+.+|+.++++++||||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM 84 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence 4567778899999999999973 2355699999876655556679999999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCce
Q 011519 131 VAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPR 196 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~k 196 (484)
||||+++++|.+++.... .+.+++..++.++.||+.||.|||++ |++||||||+|||++.++.++
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~-~i~H~dlkp~Nil~~~~~~~~ 163 (291)
T cd05094 85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ-HFVHRDLATRNCLVGANLLVK 163 (291)
T ss_pred EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC-CeeecccCcceEEEccCCcEE
Confidence 999999999999996422 23489999999999999999999999 999999999999999999999
Q ss_pred eeccCCccccCCC------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccc
Q 011519 197 LSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLT 269 (484)
Q Consensus 197 l~DfG~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~ 269 (484)
|+|||++...... ....++..|+|||++.+..++.++||||||+++|+|+| |..|+...............
T Consensus 164 l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~-- 241 (291)
T cd05094 164 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQG-- 241 (291)
T ss_pred ECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhCC--
Confidence 9999998754332 23345678999999998889999999999999999999 88776543222111111111
Q ss_pred cccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhcC
Q 011519 270 DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316 (484)
Q Consensus 270 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 316 (484)
.....+...+..+.+++.+||+.||++|||+.++++.|..+.+.
T Consensus 242 ---~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 242 ---RVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred ---CCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 11112334567899999999999999999999999999998653
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-42 Score=341.78 Aligned_cols=245 Identities=17% Similarity=0.178 Sum_probs=196.8
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecC
Q 011519 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~ 135 (484)
..|.+++.||+|+||.||++. ..+++.||||.... ..+.+|+.++++++|||||++++++......++|||++
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~ 165 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRY 165 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecC
Confidence 468999999999999999999 56789999997542 35789999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC-----CC
Q 011519 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-----GR 210 (484)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~-----~~ 210 (484)
. ++|..++. ....+++..++.++.||+.||.|||+. |||||||||+|||++.++.+||+|||+++.... ..
T Consensus 166 ~-~~L~~~l~--~~~~l~~~~~~~i~~qi~~aL~ylH~~-~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~ 241 (391)
T PHA03212 166 K-TDLYCYLA--AKRNIAICDILAIERSVLRAIQYLHEN-RIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYY 241 (391)
T ss_pred C-CCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCChHhEEEcCCCCEEEEeCCcccccccccccccc
Confidence 5 68999886 345689999999999999999999999 999999999999999999999999999875322 12
Q ss_pred cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhh-----------HHhhh--c------------cc
Q 011519 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL-----------DLIRD--R------------NI 265 (484)
Q Consensus 211 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~-----------~~~~~--~------------~~ 265 (484)
...||+.|+|||++.+..++.++|||||||++|||+||..|+..... ..+.. . ..
T Consensus 242 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~ 321 (391)
T PHA03212 242 GWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANL 321 (391)
T ss_pred cccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHH
Confidence 45789999999999988899999999999999999999977643210 00000 0 00
Q ss_pred cccc----cc--cccCCC-----ChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 266 QTLT----DS--CLEGQF-----SSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 266 ~~~~----~~--~~~~~~-----~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
.... .. ...... ....+.++.+|+.+||+.||.+|||+.+++++-+
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~ 378 (391)
T PHA03212 322 DEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAA 378 (391)
T ss_pred HHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChh
Confidence 0000 00 000000 0134678999999999999999999999998854
|
|
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-43 Score=307.84 Aligned_cols=254 Identities=19% Similarity=0.200 Sum_probs=207.1
Q ss_pred cCCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCc----c----HHHHHHHHHHHhcC-CCCceeeeeeeee
Q 011519 54 SGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP----D----ARQFLEEARAVGQL-RNRRLANLLGCCC 123 (484)
Q Consensus 54 ~~f~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~----~----~~~~~~E~~~l~~l-~hpniv~l~~~~~ 123 (484)
..|..|+--+.+|+|..++|-++. ..+|..+|+|++...... . .+.-.+|+.+|+++ -||+|+++.+++.
T Consensus 14 ~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~ye 93 (411)
T KOG0599|consen 14 GFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYE 93 (411)
T ss_pred hHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeecc
Confidence 345555555666999999999998 567889999998643221 1 33456899999998 5999999999999
Q ss_pred eCCceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCc
Q 011519 124 EGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLM 203 (484)
Q Consensus 124 ~~~~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a 203 (484)
.+..+|+|+|.|+.|.|.++|. ..-.+++....+|++|+..|+.|||.+ +||||||||+|||++++.++||+|||++
T Consensus 94 s~sF~FlVFdl~prGELFDyLt--s~VtlSEK~tR~iMrqlfegVeylHa~-~IVHRDLKpENILlddn~~i~isDFGFa 170 (411)
T KOG0599|consen 94 SDAFVFLVFDLMPRGELFDYLT--SKVTLSEKETRRIMRQLFEGVEYLHAR-NIVHRDLKPENILLDDNMNIKISDFGFA 170 (411)
T ss_pred CcchhhhhhhhcccchHHHHhh--hheeecHHHHHHHHHHHHHHHHHHHHh-hhhhcccChhheeeccccceEEecccee
Confidence 9999999999999999999996 556799999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCC---cccCCCCCCCcccccC------CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcccccccccccc
Q 011519 204 KNSRDGR---SYSTNLAFTPPEYLRT------GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLE 274 (484)
Q Consensus 204 ~~~~~~~---~~~~t~~y~aPE~~~~------~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 274 (484)
+....+. ..+|||+|.|||.+.- ..|+...|+|++||+||.|+.|.+||+..............-.. ..
T Consensus 171 ~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyq--F~ 248 (411)
T KOG0599|consen 171 CQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQ--FR 248 (411)
T ss_pred eccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccc--cC
Confidence 9988764 6799999999999862 24888999999999999999999888654322221111111111 11
Q ss_pred CCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHh
Q 011519 275 GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVT 312 (484)
Q Consensus 275 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~ 312 (484)
..--.+.+....+||.+||+.||.+|.|+.|++.|-+-
T Consensus 249 speWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff 286 (411)
T KOG0599|consen 249 SPEWADISATVKDLISRLLQVDPTKRITAKEALAHPFF 286 (411)
T ss_pred CcchhhccccHHHHHHHHHeeCchhcccHHHHhcChHH
Confidence 12234567889999999999999999999999999544
|
|
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-41 Score=322.41 Aligned_cols=249 Identities=22% Similarity=0.306 Sum_probs=203.0
Q ss_pred cccccccCCCCCCceEEEEEeC----CCcEEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEE
Q 011519 58 MENIVSEHGEKAPNVVYKGKLE----NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 132 (484)
++.+.+.||+|+||+||+|.+. +...||||.++..... ....|.+|+.+++.++||||+++++++...+..++||
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~ 84 (266)
T cd05033 5 YVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMIIT 84 (266)
T ss_pred HceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEEE
Confidence 4566777899999999999853 2457999998754433 2457899999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCC--
Q 011519 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-- 210 (484)
Q Consensus 133 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~-- 210 (484)
||+++++|.+++... .+.+++..++.++.|++.||.|||+. +++|+||||+||++++++.++|+|||++.......
T Consensus 85 e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~Lh~~-~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~ 162 (266)
T cd05033 85 EYMENGSLDKFLREN-DGKFTVGQLVGMLRGIASGMKYLSEM-NYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEAT 162 (266)
T ss_pred EcCCCCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCcceEEEcCCCCEEECccchhhcccccccc
Confidence 999999999999643 34689999999999999999999998 99999999999999999999999999998764211
Q ss_pred ----cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHHH
Q 011519 211 ----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 285 (484)
Q Consensus 211 ----~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 285 (484)
...+++.|+|||.+.+..++.++||||||+++|+|++ |..|+............... .....+...+..+
T Consensus 163 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l 237 (266)
T cd05033 163 YTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDG-----YRLPPPMDCPSAL 237 (266)
T ss_pred eeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcC-----CCCCCCCCCCHHH
Confidence 1233568999999998889999999999999999998 88776543322221111111 1112234456789
Q ss_pred HHHHHHHhccCCCCCCChHHHHHHHHhh
Q 011519 286 VRLASRCLQYEPRERPNPRSLVTALVTL 313 (484)
Q Consensus 286 ~~li~~cl~~dp~~Rps~~~il~~l~~~ 313 (484)
.+|+.+||+.+|++||++.+++++|..+
T Consensus 238 ~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 238 YQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred HHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 9999999999999999999999999764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-42 Score=342.73 Aligned_cols=244 Identities=12% Similarity=0.122 Sum_probs=198.2
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCC---CccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEe
Q 011519 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 133 (484)
+|++++.||+|+||+||++. ..+++.||||+++... ......+.+|+.++..++||||+++++.+.+.+..++|||
T Consensus 2 ~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E 81 (360)
T cd05627 2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIME 81 (360)
T ss_pred CceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEe
Confidence 46778889999999999999 4578999999996432 1234568889999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----
Q 011519 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 209 (484)
Q Consensus 134 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~---- 209 (484)
|++||+|.+++. ..+.+++..+..++.|++.||.|||+. ||+||||||+|||++.++.+||+|||++......
T Consensus 82 ~~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~~L~~lH~~-givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~ 158 (360)
T cd05627 82 FLPGGDMMTLLM--KKDTLSEEATQFYIAETVLAIDAIHQL-GFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTE 158 (360)
T ss_pred CCCCccHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEccCCCHHHEEECCCCCEEEeeccCCcccccccccc
Confidence 999999999996 345689999999999999999999999 9999999999999999999999999998643211
Q ss_pred -----------------------------------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCc
Q 011519 210 -----------------------------------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPS 254 (484)
Q Consensus 210 -----------------------------------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~ 254 (484)
....||+.|+|||++.+..++.++|||||||++|||+||..||..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~ 238 (360)
T cd05627 159 FYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS 238 (360)
T ss_pred cccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCC
Confidence 134689999999999988899999999999999999999999865
Q ss_pred hhhHHhhhccccccccccccCCCC--hHHHHHHHHHHHHHhccCCCCCCC---hHHHHHH
Q 011519 255 HALDLIRDRNIQTLTDSCLEGQFS--SDEGTELVRLASRCLQYEPRERPN---PRSLVTA 309 (484)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~li~~cl~~dp~~Rps---~~~il~~ 309 (484)
............ ..... .++ ...+.++.+|+.+++. ||.+|++ +.+++.|
T Consensus 239 ~~~~~~~~~i~~-~~~~~---~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~h 293 (360)
T cd05627 239 ETPQETYRKVMN-WKETL---VFPPEVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSH 293 (360)
T ss_pred CCHHHHHHHHHc-CCCce---ecCCCCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcC
Confidence 433222111111 00000 111 1246789999999874 9999984 6788877
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-41 Score=321.10 Aligned_cols=248 Identities=24% Similarity=0.351 Sum_probs=204.1
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCC
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~ 136 (484)
.+|+++++||+|+||.||+|...++..||+|.+..... ..+.|.+|+.++++++||||+++++++. ....++||||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~ 83 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMS 83 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecC
Confidence 35788899999999999999987888899999976443 3467999999999999999999999875 456899999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCC-----c
Q 011519 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-----S 211 (484)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~-----~ 211 (484)
+++|.+++.......+++..+..++.|++.||.|||+. +++|+||||+||++++++.++|+|||++....... .
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~-~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~ 162 (260)
T cd05070 84 KGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERM-NYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQG 162 (260)
T ss_pred CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCccceEEEeCCceEEeCCceeeeeccCcccccccC
Confidence 99999999754455689999999999999999999998 99999999999999999999999999987654321 2
Q ss_pred ccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHH
Q 011519 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (484)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (484)
..++..|+|||.+.+..++.++||||||+++|+|++ |..||............. .......+...+..+.+|+.
T Consensus 163 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~li~ 237 (260)
T cd05070 163 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVE-----RGYRMPCPQDCPISLHELML 237 (260)
T ss_pred CCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH-----cCCCCCCCCcCCHHHHHHHH
Confidence 234567999999988889999999999999999999 777765432221111111 11112234456788999999
Q ss_pred HHhccCCCCCCChHHHHHHHHh
Q 011519 291 RCLQYEPRERPNPRSLVTALVT 312 (484)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~l~~ 312 (484)
+||..+|++|||+.++.+.|+.
T Consensus 238 ~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 238 QCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred HHcccCcccCcCHHHHHHHHhc
Confidence 9999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-41 Score=321.11 Aligned_cols=245 Identities=20% Similarity=0.265 Sum_probs=205.4
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCC--CccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecC
Q 011519 59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 59 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~ 135 (484)
|.+.+.||+|+||.||+|+. .+++.|++|.+.... ......+.+|+++++.++||||+++++++...+..++||||+
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd08529 2 FEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYA 81 (256)
T ss_pred ceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeC
Confidence 45667789999999999994 578999999986543 234567899999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----Cc
Q 011519 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RS 211 (484)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~----~~ 211 (484)
++++|.+++.......+++..++.++.|++.||.|||+. |++|+||||+||+++.++.++|+|||++...... ..
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~-~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~~~ 160 (256)
T cd08529 82 ENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSK-KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANT 160 (256)
T ss_pred CCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCcceEEEeCCCCEEEcccccceeccCccchhhc
Confidence 999999999765456799999999999999999999998 9999999999999999999999999998865443 23
Q ss_pred ccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHH
Q 011519 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291 (484)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 291 (484)
..+++.|+|||++.+..++.++|+||||+++++|+||+.|+................ ....+...+..+.+++.+
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~i~~ 235 (256)
T cd08529 161 IVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGV-----FPPVSQMYSQQLAQLIDQ 235 (256)
T ss_pred cccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC-----CCCCccccCHHHHHHHHH
Confidence 457889999999998889999999999999999999999886543222211111111 112333556789999999
Q ss_pred HhccCCCCCCChHHHHHH
Q 011519 292 CLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 292 cl~~dp~~Rps~~~il~~ 309 (484)
||+.+|++||++.+++++
T Consensus 236 ~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 236 CLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred HccCCcccCcCHHHHhhC
Confidence 999999999999999876
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-42 Score=359.84 Aligned_cols=255 Identities=24% Similarity=0.376 Sum_probs=206.5
Q ss_pred cccccccCCCCCCceEEEEEeC--CCc----EEEEEEecCCC-CccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEE
Q 011519 58 MENIVSEHGEKAPNVVYKGKLE--NQF----RIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~~--~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 130 (484)
...+.+.||+|+||.||.|... .|. .||||.+++.. .+...+|++|..+|+.++|||||+++|++.+....+|
T Consensus 693 ~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i 772 (1025)
T KOG1095|consen 693 NVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLI 772 (1025)
T ss_pred heEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEE
Confidence 3345567899999999999943 343 49999997754 3457789999999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCC-----CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccc
Q 011519 131 VAEYMPNDTLAKHLFHWE-----TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN 205 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 205 (484)
++|||.||+|.+||++.+ ...++..+.+.++.|||+|+.||+++ ++|||||..+|+||+....|||+|||+|+.
T Consensus 773 ~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~-~fvHRDLAaRNCLL~~~r~VKIaDFGlArD 851 (1025)
T KOG1095|consen 773 LLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK-HFVHRDLAARNCLLDERRVVKIADFGLARD 851 (1025)
T ss_pred EehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC-CCcCcchhhhheeecccCcEEEcccchhHh
Confidence 999999999999997642 34588999999999999999999999 999999999999999999999999999995
Q ss_pred cCCCCcc------cCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCCh
Q 011519 206 SRDGRSY------STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSS 279 (484)
Q Consensus 206 ~~~~~~~------~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (484)
......+ .-...|||||.+..+.++.|+|||||||+|||++|...+|+....+.. .+..+.... +-..|.
T Consensus 852 iy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~---v~~~~~~gg-RL~~P~ 927 (1025)
T KOG1095|consen 852 IYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFE---VLLDVLEGG-RLDPPS 927 (1025)
T ss_pred hhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHH---HHHHHHhCC-ccCCCC
Confidence 4332111 113579999999999999999999999999999996654443321110 011011111 234567
Q ss_pred HHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhcCC
Q 011519 280 DEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (484)
Q Consensus 280 ~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 317 (484)
.++..+.+||..||+.+|++||++..|++.+..+....
T Consensus 928 ~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~ 965 (1025)
T KOG1095|consen 928 YCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAA 965 (1025)
T ss_pred CCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhh
Confidence 78899999999999999999999999999887776543
|
|
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-41 Score=320.74 Aligned_cols=249 Identities=25% Similarity=0.348 Sum_probs=204.1
Q ss_pred CCcccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeee-eCCceEEEEec
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCC-EGDERLLVAEY 134 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~~~~~~lv~Ey 134 (484)
..++.+.+.||+|+||.||++... |..||+|.++... ..+.|.+|+.++++++|+|++++++++. ..+..++||||
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~ 81 (256)
T cd05082 5 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 81 (256)
T ss_pred HHhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEEC
Confidence 346788889999999999999864 6689999986543 3567899999999999999999999764 45678999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-Cccc
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-RSYS 213 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~-~~~~ 213 (484)
+++++|.+++.......+++..++.++.||+.||.|||+. |++||||||+||++++++.+||+|||++...... ....
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 160 (256)
T cd05082 82 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEAN-NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK 160 (256)
T ss_pred CCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CEeccccchheEEEcCCCcEEecCCccceeccccCCCCc
Confidence 9999999999755555689999999999999999999998 9999999999999999999999999998765433 2334
Q ss_pred CCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHH
Q 011519 214 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRC 292 (484)
Q Consensus 214 ~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 292 (484)
++..|+|||++.+..++.++|||||||++|+|++ |+.|+.............. ......+...++.+.+++.+|
T Consensus 161 ~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~li~~~ 235 (256)
T cd05082 161 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK-----GYKMDAPDGCPPVVYDVMKQC 235 (256)
T ss_pred cceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhc-----CCCCCCCCCCCHHHHHHHHHH
Confidence 4568999999988889999999999999999998 8877664332222111111 111223445678899999999
Q ss_pred hccCCCCCCChHHHHHHHHhh
Q 011519 293 LQYEPRERPNPRSLVTALVTL 313 (484)
Q Consensus 293 l~~dp~~Rps~~~il~~l~~~ 313 (484)
|+.+|++|||+.++++.|+.+
T Consensus 236 l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 236 WHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred hcCChhhCcCHHHHHHHHhcC
Confidence 999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-41 Score=324.36 Aligned_cols=252 Identities=18% Similarity=0.246 Sum_probs=200.6
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCc----EEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQF----RIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~----~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 130 (484)
.++++++.||+|+||+||+|.+ .++. .|++|.+...... ....+..|+.++..++||||+++++++. ....++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~ 85 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQL 85 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEE
Confidence 3567778899999999999994 4454 4788887643322 2456788888999999999999999875 456789
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-
Q 011519 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 209 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~- 209 (484)
++||+++|+|.+++.. ..+.+++..+..++.||+.||.|||+. +++|+||||+|||++.++.+||+|||+++.....
T Consensus 86 i~e~~~~gsL~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~-~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~ 163 (279)
T cd05111 86 VTQLSPLGSLLDHVRQ-HRDSLDPQRLLNWCVQIAKGMYYLEEH-RMVHRNLAARNILLKSDSIVQIADFGVADLLYPDD 163 (279)
T ss_pred EEEeCCCCcHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHC-CEeccccCcceEEEcCCCcEEEcCCccceeccCCC
Confidence 9999999999999964 345689999999999999999999998 9999999999999999999999999999765332
Q ss_pred -----CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHH
Q 011519 210 -----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283 (484)
Q Consensus 210 -----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (484)
....++..|++||++.++.++.++||||||+++|||+| |..|+........... .........+..++.
T Consensus 164 ~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 238 (279)
T cd05111 164 KKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDL-----LEKGERLAQPQICTI 238 (279)
T ss_pred cccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH-----HHCCCcCCCCCCCCH
Confidence 22345678999999998889999999999999999998 8877765432221111 011111111223456
Q ss_pred HHHHHHHHHhccCCCCCCChHHHHHHHHhhhcC
Q 011519 284 ELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316 (484)
Q Consensus 284 ~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 316 (484)
.+.+++.+||..||++|||+.++++.|..+..+
T Consensus 239 ~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~ 271 (279)
T cd05111 239 DVYMVMVKCWMIDENVRPTFKELANEFTRMARD 271 (279)
T ss_pred HHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhC
Confidence 789999999999999999999999999887764
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-42 Score=339.61 Aligned_cols=248 Identities=16% Similarity=0.132 Sum_probs=201.4
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCC---ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEe
Q 011519 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 133 (484)
+|++++.||+|+||+||++. ..+++.||||+++.... ...+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (330)
T cd05601 2 DFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVME 81 (330)
T ss_pred CceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEEC
Confidence 46778889999999999999 45789999999975432 234568899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----
Q 011519 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 209 (484)
Q Consensus 134 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~---- 209 (484)
|+++|+|.+++... ...+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||++......
T Consensus 82 ~~~~~~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~lH~~-~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~ 159 (330)
T cd05601 82 YQPGGDLLSLLNRY-EDQFDEDMAQFYLAELVLAIHSVHQM-GYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVN 159 (330)
T ss_pred CCCCCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC-CeEcccCchHheEECCCCCEEeccCCCCeECCCCCcee
Confidence 99999999999642 35699999999999999999999999 9999999999999999999999999999865433
Q ss_pred -CcccCCCCCCCccccc------CCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHH
Q 011519 210 -RSYSTNLAFTPPEYLR------TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG 282 (484)
Q Consensus 210 -~~~~~t~~y~aPE~~~------~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (484)
....||+.|+|||++. +..++.++|||||||++|+|++|..||............... . ...........+
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~-~-~~~~~~~~~~~~ 237 (330)
T cd05601 160 SKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNF-Q-RFLKFPEDPKVS 237 (330)
T ss_pred eecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcC-C-CccCCCCCCCCC
Confidence 2346889999999987 455789999999999999999999988654322211111100 0 000001112356
Q ss_pred HHHHHHHHHHhccCCCCCCChHHHHHHH
Q 011519 283 TELVRLASRCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 283 ~~l~~li~~cl~~dp~~Rps~~~il~~l 310 (484)
..+.+|+..||. +|.+|||+.+++.|-
T Consensus 238 ~~~~~li~~ll~-~p~~R~t~~~l~~h~ 264 (330)
T cd05601 238 SDFLDLIQSLLC-GQKERLGYEGLCCHP 264 (330)
T ss_pred HHHHHHHHHHcc-ChhhCCCHHHHhCCC
Confidence 789999999998 999999999999873
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-41 Score=320.76 Aligned_cols=249 Identities=24% Similarity=0.340 Sum_probs=202.9
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCC
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~ 136 (484)
.+|+++++||+|+||.||+|+..++..||||+++.... ..+.|.+|+.+++.++||||+++++++.. ...++||||++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~~ 83 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMS 83 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEEEcCC
Confidence 35788899999999999999976666799999975432 34678999999999999999999998754 56899999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCC-----c
Q 011519 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-----S 211 (484)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~-----~ 211 (484)
+|+|.+++.......+++..+..++.|++.||.|||+. +++|+||||+||++++++.++|+|||.+....... .
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~-~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~~~ 162 (262)
T cd05071 84 KGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM-NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 162 (262)
T ss_pred CCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHC-CccccccCcccEEEcCCCcEEeccCCceeeccccccccccC
Confidence 99999999754455689999999999999999999998 99999999999999999999999999987654322 2
Q ss_pred ccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHH
Q 011519 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (484)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (484)
..++..|+|||+..+..++.++||||||+++|+|+| |..||............... .....+...+..+.+|+.
T Consensus 163 ~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~ 237 (262)
T cd05071 163 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-----YRMPCPPECPESLHDLMC 237 (262)
T ss_pred CcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcC-----CCCCCccccCHHHHHHHH
Confidence 334567999999988889999999999999999999 66666543222211111110 011223456678999999
Q ss_pred HHhccCCCCCCChHHHHHHHHhh
Q 011519 291 RCLQYEPRERPNPRSLVTALVTL 313 (484)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~l~~~ 313 (484)
+||+.||++|||+.++++.|+..
T Consensus 238 ~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 238 QCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred HHccCCcccCCCHHHHHHHHHHh
Confidence 99999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-41 Score=319.46 Aligned_cols=241 Identities=25% Similarity=0.370 Sum_probs=195.9
Q ss_pred cCCCCCCceEEEEEe-CCCcEEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCCCCCHH
Q 011519 64 EHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLA 141 (484)
Q Consensus 64 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~~gsL~ 141 (484)
.||+|+||.||+|+. .+++.||+|.+...... ....+.+|+++++.++||||+++++++......++||||+++++|.
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 81 (252)
T cd05084 2 RIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFL 81 (252)
T ss_pred ccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcHH
Confidence 579999999999994 57889999998654322 2457999999999999999999999999999999999999999999
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCCc------ccCC
Q 011519 142 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS------YSTN 215 (484)
Q Consensus 142 ~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~------~~~t 215 (484)
+++.. .+..+++..++.++.|++.||.|||+. |++|+||||+||+++.++.+||+|||++........ ...+
T Consensus 82 ~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~-~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~ 159 (252)
T cd05084 82 TFLRT-EGPRLKVKELIQMVENAAAGMEYLESK-HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIP 159 (252)
T ss_pred HHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhC-CccccccchheEEEcCCCcEEECccccCcccccccccccCCCCCCc
Confidence 99963 334689999999999999999999999 999999999999999999999999999876443211 1223
Q ss_pred CCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHHhc
Q 011519 216 LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ 294 (484)
Q Consensus 216 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 294 (484)
..|+|||.+.++.++.++||||||+++|+|++ |..|+............. .......+...+..+.+|+.+||.
T Consensus 160 ~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~li~~~l~ 234 (252)
T cd05084 160 VKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIE-----QGVRLPCPELCPDAVYRLMERCWE 234 (252)
T ss_pred eeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHH-----cCCCCCCcccCCHHHHHHHHHHcC
Confidence 56999999998889999999999999999998 666554322111111111 111122344556789999999999
Q ss_pred cCCCCCCChHHHHHHHH
Q 011519 295 YEPRERPNPRSLVTALV 311 (484)
Q Consensus 295 ~dp~~Rps~~~il~~l~ 311 (484)
.+|++|||+.++++.|.
T Consensus 235 ~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 235 YDPGQRPSFSTVHQELQ 251 (252)
T ss_pred CChhhCcCHHHHHHHHh
Confidence 99999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-41 Score=328.17 Aligned_cols=249 Identities=18% Similarity=0.238 Sum_probs=207.5
Q ss_pred CCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEe
Q 011519 55 GFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (484)
Q Consensus 55 ~f~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 133 (484)
-...|.+++.||.|+||.||+|. ..+++.|++|.+........+.+.+|+.+++.++||||+++++.+......++|||
T Consensus 18 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e 97 (296)
T cd06654 18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME 97 (296)
T ss_pred cccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeec
Confidence 34578888999999999999999 45788999999987665566779999999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----
Q 011519 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 209 (484)
Q Consensus 134 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~---- 209 (484)
|+++++|.+++. ...+++.++..++.|++.||.|||+. |++|+||||+||+++.++.++|+|||++......
T Consensus 98 ~~~~~~L~~~~~---~~~~~~~~~~~i~~ql~~aL~~LH~~-gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~ 173 (296)
T cd06654 98 YLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALEFLHSN-QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR 173 (296)
T ss_pred ccCCCCHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEEcCCCCEEECccccchhcccccccc
Confidence 999999999985 34589999999999999999999999 9999999999999999999999999998764332
Q ss_pred CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHH
Q 011519 210 RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289 (484)
Q Consensus 210 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 289 (484)
....+++.|+|||.+.+..++.++|||||||++|+|++|+.||............. .........+...+..+.+++
T Consensus 174 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~li 250 (296)
T cd06654 174 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA---TNGTPELQNPEKLSAIFRDFL 250 (296)
T ss_pred CcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHh---cCCCCCCCCccccCHHHHHHH
Confidence 23467889999999988889999999999999999999999886543211110000 011111122345667899999
Q ss_pred HHHhccCCCCCCChHHHHHHH
Q 011519 290 SRCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 290 ~~cl~~dp~~Rps~~~il~~l 310 (484)
.+||..||++|||+.+++.+-
T Consensus 251 ~~~l~~~p~~Rpt~~eil~~~ 271 (296)
T cd06654 251 NRCLDMDVEKRGSAKELLQHQ 271 (296)
T ss_pred HHHCcCCcccCcCHHHHhhCh
Confidence 999999999999999999873
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-42 Score=340.57 Aligned_cols=255 Identities=17% Similarity=0.136 Sum_probs=202.8
Q ss_pred HHhcCCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCC---ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCC
Q 011519 51 TATSGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGD 126 (484)
Q Consensus 51 ~~~~~f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~ 126 (484)
...-....|++++.||+|+||.||++.. .+++.||+|++..... .....+.+|+.+++.++||||+++++.+...+
T Consensus 37 ~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~ 116 (371)
T cd05622 37 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR 116 (371)
T ss_pred hcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC
Confidence 3444456788899999999999999994 5688999999864221 22445789999999999999999999999999
Q ss_pred ceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCcccc
Q 011519 127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 206 (484)
Q Consensus 127 ~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~ 206 (484)
..++||||++||+|.+++. ...+++..+..++.||+.||.|||+. ||+||||||+|||++.++.+||+|||++...
T Consensus 117 ~~~lv~Ey~~gg~L~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~ 192 (371)
T cd05622 117 YLYMVMEYMPGGDLVNLMS---NYDVPEKWARFYTAEVVLALDAIHSM-GFIHRDVKPDNMLLDKSGHLKLADFGTCMKM 192 (371)
T ss_pred EEEEEEcCCCCCcHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHC-CEEeCCCCHHHEEECCCCCEEEEeCCceeEc
Confidence 9999999999999999985 34589999999999999999999999 9999999999999999999999999998865
Q ss_pred CCC-----CcccCCCCCCCcccccCC----CCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCC
Q 011519 207 RDG-----RSYSTNLAFTPPEYLRTG----RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQF 277 (484)
Q Consensus 207 ~~~-----~~~~~t~~y~aPE~~~~~----~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (484)
... ....||+.|+|||++.+. .++.++|||||||++|||++|..||................ .. .....
T Consensus 193 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~-~~-~~~~~ 270 (371)
T cd05622 193 NKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHK-NS-LTFPD 270 (371)
T ss_pred CcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCC-Cc-ccCCC
Confidence 432 245689999999998753 27889999999999999999999987543322111111110 00 01011
Q ss_pred ChHHHHHHHHHHHHHhccCCCC--CCChHHHHHHHH
Q 011519 278 SSDEGTELVRLASRCLQYEPRE--RPNPRSLVTALV 311 (484)
Q Consensus 278 ~~~~~~~l~~li~~cl~~dp~~--Rps~~~il~~l~ 311 (484)
....+..+.+++..||..++.+ |+++.++++|.+
T Consensus 271 ~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~ 306 (371)
T cd05622 271 DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLF 306 (371)
T ss_pred cCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcc
Confidence 2345788999999999844433 789999999864
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-44 Score=317.28 Aligned_cols=244 Identities=17% Similarity=0.218 Sum_probs=209.1
Q ss_pred ccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCCC
Q 011519 59 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPN 137 (484)
Q Consensus 59 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~~ 137 (484)
++++++||+|+||.||++. ..+|..||||.+.... +.+.+.+|+.+|++++.|+||+++|.+.....+|||||||.-
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s--DLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGA 112 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT--DLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGA 112 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc--hHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCC
Confidence 3678899999999999999 5679999999987543 688899999999999999999999999999999999999999
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC----CCccc
Q 011519 138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYS 213 (484)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~----~~~~~ 213 (484)
||+.++++- ++.++++.++..++...+.||+|||.. .-||||||..|||++.+|.+||+|||.+..+.+ ..+..
T Consensus 113 GSiSDI~R~-R~K~L~E~EIs~iL~~TLKGL~YLH~~-~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRNTVI 190 (502)
T KOG0574|consen 113 GSISDIMRA-RRKPLSEQEISAVLRDTLKGLQYLHDL-KKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRNTVI 190 (502)
T ss_pred CcHHHHHHH-hcCCccHHHHHHHHHHHHhHHHHHHHH-HHHHhhcccccEEEcccchhhhhhccccchhhhhHHhhCccc
Confidence 999999864 667899999999999999999999998 889999999999999999999999999987654 36788
Q ss_pred CCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHHh
Q 011519 214 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 293 (484)
Q Consensus 214 ~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 293 (484)
|||.|||||++..-.|+.++||||||++..||.-|++|+...... . ..+.....+...-.-|...+.++-+|++.||
T Consensus 191 GTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPM-R--AIFMIPT~PPPTF~KPE~WS~~F~DFi~~CL 267 (502)
T KOG0574|consen 191 GTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPM-R--AIFMIPTKPPPTFKKPEEWSSEFNDFIRSCL 267 (502)
T ss_pred cCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccccccc-c--eeEeccCCCCCCCCChHhhhhHHHHHHHHHh
Confidence 999999999999888999999999999999999999775432110 0 1111111111222335667899999999999
Q ss_pred ccCCCCCCChHHHHHH
Q 011519 294 QYEPRERPNPRSLVTA 309 (484)
Q Consensus 294 ~~dp~~Rps~~~il~~ 309 (484)
.++|++|-|+-++++|
T Consensus 268 iK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 268 IKKPEERKTALRLCEH 283 (502)
T ss_pred cCCHHHHHHHHHHhhh
Confidence 9999999999999987
|
|
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-41 Score=320.36 Aligned_cols=246 Identities=24% Similarity=0.353 Sum_probs=201.4
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCC
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~ 136 (484)
.++.+.+.||+|+||.||++...++..+|||++..... ....|.+|+.+++.++||||+++++++...+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM-SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMA 82 (256)
T ss_pred HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCC
Confidence 45677888999999999999977777899999875432 34578899999999999999999999999999999999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCCc-----
Q 011519 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS----- 211 (484)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~----- 211 (484)
+++|.+++... ...+++..++.++.||+.||.|||+. |++||||||+||++++++.+||+|||+++.......
T Consensus 83 ~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~~ 160 (256)
T cd05059 83 NGCLLNYLRER-KGKLGTEWLLDMCSDVCEAMEYLESN-GFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQG 160 (256)
T ss_pred CCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHC-CcccccccHhhEEECCCCcEEECCcccceecccccccccCC
Confidence 99999999643 34689999999999999999999999 999999999999999999999999999876543221
Q ss_pred ccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHH
Q 011519 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (484)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (484)
..++..|+|||.+.+..++.++||||||+++|+|+| |..||.............. ......+...+..+.+++.
T Consensus 161 ~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~li~ 235 (256)
T cd05059 161 TKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSA-----GYRLYRPKLAPTEVYTIMY 235 (256)
T ss_pred CCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHc-----CCcCCCCCCCCHHHHHHHH
Confidence 122357999999998889999999999999999999 6766643322111111111 1111233446788999999
Q ss_pred HHhccCCCCCCChHHHHHHH
Q 011519 291 RCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~l 310 (484)
+||..+|++|||+.++++.|
T Consensus 236 ~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 236 SCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred HHhcCChhhCcCHHHHHHHh
Confidence 99999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-42 Score=325.99 Aligned_cols=250 Identities=22% Similarity=0.293 Sum_probs=203.1
Q ss_pred CCcccccccCCCCCCceEEEEEe------CCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceE
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 129 (484)
+.++.+.++||+|+||.||++.. .++..+|+|.+..........|.+|+++++.++||||+++++++...+..+
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (280)
T cd05092 4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLL 83 (280)
T ss_pred hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceE
Confidence 45677889999999999999963 235689999987665555678999999999999999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCCC-------------CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCce
Q 011519 130 LVAEYMPNDTLAKHLFHWET-------------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPR 196 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~~~~-------------~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~k 196 (484)
+||||+++|+|.+++..... ..+++..++.++.||+.||.|||+. |++|+||||+|||+++++.+|
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~-~i~H~dlkp~nil~~~~~~~k 162 (280)
T cd05092 84 MVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL-HFVHRDLATRNCLVGQGLVVK 162 (280)
T ss_pred EEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC-CeecccccHhhEEEcCCCCEE
Confidence 99999999999999964321 3588999999999999999999998 999999999999999999999
Q ss_pred eeccCCccccCCC------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccc
Q 011519 197 LSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLT 269 (484)
Q Consensus 197 l~DfG~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~ 269 (484)
|+|||++...... ....+++.|+|||++.+..++.++|||||||++|||++ |..||...............
T Consensus 163 L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-- 240 (280)
T cd05092 163 IGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQG-- 240 (280)
T ss_pred ECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHHcC--
Confidence 9999998754322 12234678999999998889999999999999999998 77766433221111111110
Q ss_pred cccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 270 DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 270 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
.....+..+++.+.+|+.+||+.||.+||++.+|+..|+
T Consensus 241 ---~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 241 ---RELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred ---ccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 111223445678999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-41 Score=322.64 Aligned_cols=255 Identities=17% Similarity=0.213 Sum_probs=208.1
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCc---cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEE
Q 011519 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 132 (484)
++|++.+.||.|+||.||++. ..+++.||||.+...... ....+.+|+.+++.++||||+++++++..++..++||
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 467788889999999999999 568899999988653322 2457889999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCC
Q 011519 133 EYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR 210 (484)
Q Consensus 133 Ey~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 210 (484)
||+++++|.+++... ....+++..++.++.||+.||.|||+. |++|+||||+||+++.++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~-~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR-RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT 160 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEEcCCCCEEECcchhhhccccCC
Confidence 999999999988632 245689999999999999999999998 99999999999999999999999999987654332
Q ss_pred ----cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHH
Q 011519 211 ----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 286 (484)
Q Consensus 211 ----~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 286 (484)
...++..|+|||++.+..++.++||||||+++|+|++|..|+.....+.... ...+.........+...+..+.
T Consensus 161 ~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 238 (267)
T cd08229 161 TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSL--CKKIEQCDYPPLPSDHYSEELR 238 (267)
T ss_pred cccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHH--hhhhhcCCCCCCCcccccHHHH
Confidence 3467889999999988889999999999999999999998876432211110 0000000111112234678899
Q ss_pred HHHHHHhccCCCCCCChHHHHHHHHhhh
Q 011519 287 RLASRCLQYEPRERPNPRSLVTALVTLQ 314 (484)
Q Consensus 287 ~li~~cl~~dp~~Rps~~~il~~l~~~~ 314 (484)
+++.+||..||++|||+.+|++.+..+.
T Consensus 239 ~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 239 QLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred HHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 9999999999999999999999987653
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-41 Score=328.24 Aligned_cols=257 Identities=21% Similarity=0.298 Sum_probs=204.2
Q ss_pred CCCcccccccCCCCCCceEEEEEe-CCCc--EEEEEEecCCCC-ccHHHHHHHHHHHhcC-CCCceeeeeeeeeeCCceE
Q 011519 55 GFAMENIVSEHGEKAPNVVYKGKL-ENQF--RIAVKRFNRSAW-PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL 129 (484)
Q Consensus 55 ~f~~~~~~~~lG~G~~g~Vy~~~~-~~~~--~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~ 129 (484)
.|.++.+.+.||+|+||.||+|.. .++. .+++|.++.... ...+.+.+|+.++.++ +||||+++++++...+..+
T Consensus 5 ~~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~ 84 (303)
T cd05088 5 EWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 84 (303)
T ss_pred chhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCce
Confidence 356678888899999999999995 4454 467887764332 2345788999999999 8999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCc
Q 011519 130 LVAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNP 195 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~ 195 (484)
+||||+++|+|.+++.... ...+++..++.++.||+.||.|||+. |++||||||+|||++.++.+
T Consensus 85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~-gi~H~dlkp~Nili~~~~~~ 163 (303)
T cd05088 85 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK-QFIHRDLAARNILVGENYVA 163 (303)
T ss_pred EEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC-CccccccchheEEecCCCcE
Confidence 9999999999999996421 23578999999999999999999998 99999999999999999999
Q ss_pred eeeccCCccccCCC---CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccc
Q 011519 196 RLSCFGLMKNSRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDS 271 (484)
Q Consensus 196 kl~DfG~a~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~ 271 (484)
||+|||++...... ....++..|+|||++.+..++.++|||||||++|||+| |..||............ ..
T Consensus 164 kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~-----~~ 238 (303)
T cd05088 164 KIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL-----PQ 238 (303)
T ss_pred EeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHH-----hc
Confidence 99999998643221 12233567999999988889999999999999999998 88777543222111111 11
Q ss_pred cccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhcCC
Q 011519 272 CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (484)
Q Consensus 272 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 317 (484)
......+...+..+.+|+.+||+.+|++||++.+++..|..+....
T Consensus 239 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~ 284 (303)
T cd05088 239 GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER 284 (303)
T ss_pred CCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 1111223345678999999999999999999999999998876544
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-42 Score=335.48 Aligned_cols=232 Identities=19% Similarity=0.234 Sum_probs=189.8
Q ss_pred cCCCCCCceEEEEEe-CCCcEEEEEEecCCCC---ccHHHHHHHHH-HHhcCCCCceeeeeeeeeeCCceEEEEecCCCC
Q 011519 64 EHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEAR-AVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 138 (484)
Q Consensus 64 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~-~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~~g 138 (484)
.||+|+||.||+|+. .+++.||||++..... .....+..|.. +++.++||||+++++++.+.+..++||||+++|
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (321)
T cd05603 2 VIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNGG 81 (321)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence 579999999999995 5688999999865321 12334556654 578899999999999999999999999999999
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC----CCcccC
Q 011519 139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYST 214 (484)
Q Consensus 139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~----~~~~~~ 214 (484)
+|..++. ....+++..+..++.||+.||.|||+. ||+||||||+|||++.++.+||+|||+++.... .....|
T Consensus 82 ~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~lH~~-~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 158 (321)
T cd05603 82 ELFFHLQ--RERCFLEPRARFYAAEVASAIGYLHSL-NIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFCG 158 (321)
T ss_pred CHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCccccccC
Confidence 9999886 345689999999999999999999998 999999999999999999999999999875322 234568
Q ss_pred CCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHHhc
Q 011519 215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ 294 (484)
Q Consensus 215 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 294 (484)
|+.|+|||++.+..++.++|||||||++|||++|..||............... ...++...+..+.+++.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~~li~~~l~ 232 (321)
T cd05603 159 TPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHK------PLQLPGGKTVAACDLLVGLLH 232 (321)
T ss_pred CcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcC------CCCCCCCCCHHHHHHHHHHcc
Confidence 99999999999888999999999999999999999988654332222211111 112344556789999999999
Q ss_pred cCCCCCCChH
Q 011519 295 YEPRERPNPR 304 (484)
Q Consensus 295 ~dp~~Rps~~ 304 (484)
.||.+||++.
T Consensus 233 ~~p~~R~~~~ 242 (321)
T cd05603 233 KDQRRRLGAK 242 (321)
T ss_pred CCHhhcCCCC
Confidence 9999999764
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-41 Score=319.80 Aligned_cols=240 Identities=20% Similarity=0.260 Sum_probs=196.1
Q ss_pred cCCCCCCceEEEEEe---CCCcEEEEEEecCCCCc--cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCCCC
Q 011519 64 EHGEKAPNVVYKGKL---ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 138 (484)
Q Consensus 64 ~lG~G~~g~Vy~~~~---~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~~g 138 (484)
+||+|+||.||+|.+ .++..||||+++..... ..+.+.+|+.+++.++||||+++++++. .+..++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 579999999999964 45788999998754322 2557899999999999999999999875 45679999999999
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCC-------c
Q 011519 139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-------S 211 (484)
Q Consensus 139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~-------~ 211 (484)
+|.+++. ....+++..+..++.|++.||.|||+. |++||||||.||+++.++.+||+|||++....... .
T Consensus 81 ~L~~~l~--~~~~~~~~~~~~i~~qi~~al~~lH~~-~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~ 157 (257)
T cd05116 81 PLNKFLQ--KNKHVTEKNITELVHQVSMGMKYLEET-NFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTH 157 (257)
T ss_pred cHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCC
Confidence 9999996 345689999999999999999999998 99999999999999999999999999987654322 1
Q ss_pred ccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHH
Q 011519 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (484)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (484)
..+++.|+|||.+.+..++.++|||||||++|||++ |..||........... .........+...++++.++|.
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~-----i~~~~~~~~~~~~~~~l~~li~ 232 (257)
T cd05116 158 GKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQM-----IESGERMECPQRCPPEMYDLMK 232 (257)
T ss_pred CCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-----HHCCCCCCCCCCCCHHHHHHHH
Confidence 223578999999988889999999999999999998 8877764322211111 1111122344556788999999
Q ss_pred HHhccCCCCCCChHHHHHHHHh
Q 011519 291 RCLQYEPRERPNPRSLVTALVT 312 (484)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~l~~ 312 (484)
+||+.||++||++.+|...|+.
T Consensus 233 ~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 233 LCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred HHhccCchhCcCHHHHHHHHhc
Confidence 9999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-42 Score=334.86 Aligned_cols=233 Identities=17% Similarity=0.199 Sum_probs=190.7
Q ss_pred cCCCCCCceEEEEE-eCCCcEEEEEEecCCCC---ccHHHHHHHHH-HHhcCCCCceeeeeeeeeeCCceEEEEecCCCC
Q 011519 64 EHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEAR-AVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 138 (484)
Q Consensus 64 ~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~-~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~~g 138 (484)
.||+|+||+||+|. ..+|+.||||++..... .....+..|.. +++.++||||+++++++...+..++||||+++|
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (325)
T cd05604 2 VIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGG 81 (325)
T ss_pred ceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCCC
Confidence 57999999999999 56789999999965321 22345566665 467789999999999999999999999999999
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC----CCcccC
Q 011519 139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYST 214 (484)
Q Consensus 139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~----~~~~~~ 214 (484)
+|..++. ..+.+++..+..++.||+.||.|||+. |++||||||+|||++.++.+||+|||+++.... .....|
T Consensus 82 ~L~~~l~--~~~~~~~~~~~~~~~qi~~al~~lH~~-givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~g 158 (325)
T cd05604 82 ELFFHLQ--RERSFPEPRARFYAAEIASALGYLHSI-NIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFCG 158 (325)
T ss_pred CHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCcccccC
Confidence 9999886 455799999999999999999999999 999999999999999999999999999875322 234568
Q ss_pred CCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHHhc
Q 011519 215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ 294 (484)
Q Consensus 215 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 294 (484)
|+.|+|||++.+..++.++|||||||++|+|++|..||................ ...++..+..+.+++.+||.
T Consensus 159 t~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ll~~ll~ 232 (325)
T cd05604 159 TPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKP------LVLRPGASLTAWSILEELLE 232 (325)
T ss_pred ChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCC------ccCCCCCCHHHHHHHHHHhc
Confidence 999999999998889999999999999999999999887543322221111110 11223456789999999999
Q ss_pred cCCCCCCChHH
Q 011519 295 YEPRERPNPRS 305 (484)
Q Consensus 295 ~dp~~Rps~~~ 305 (484)
.+|.+||++++
T Consensus 233 ~~p~~R~~~~~ 243 (325)
T cd05604 233 KDRQRRLGAKE 243 (325)
T ss_pred cCHHhcCCCCC
Confidence 99999998863
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-42 Score=347.53 Aligned_cols=249 Identities=20% Similarity=0.251 Sum_probs=193.9
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeC--------Cc
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEG--------DE 127 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~--------~~ 127 (484)
..|.+++.||+|+||+||+|.. .+++.||||++.... ....+|+.+|+.++|||||++++++... ..
T Consensus 66 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 141 (440)
T PTZ00036 66 KSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIF 141 (440)
T ss_pred CeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceE
Confidence 3578889999999999999994 578899999985432 2345799999999999999999886432 23
Q ss_pred eEEEEecCCCCCHHhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCC-CceeeccCCcc
Q 011519 128 RLLVAEYMPNDTLAKHLFH--WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV-NPRLSCFGLMK 204 (484)
Q Consensus 128 ~~lv~Ey~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~-~~kl~DfG~a~ 204 (484)
+++||||+++ +|.+++.. .....+++..+..++.||+.||.|||+. ||+||||||+|||++.++ .+||+|||+++
T Consensus 142 l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~-~IiHrDLKp~NILl~~~~~~vkL~DFGla~ 219 (440)
T PTZ00036 142 LNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK-FICHRDLKPQNLLIDPNTHTLKLCDFGSAK 219 (440)
T ss_pred EEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCcCHHHEEEcCCCCceeeeccccch
Confidence 6799999975 78777643 2346789999999999999999999999 999999999999999654 79999999998
Q ss_pred ccCCC---CcccCCCCCCCcccccCC-CCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccc---------------
Q 011519 205 NSRDG---RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI--------------- 265 (484)
Q Consensus 205 ~~~~~---~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~--------------- 265 (484)
..... ....+|+.|+|||++.+. .++.++|||||||++|||+||.+||.+...........
T Consensus 220 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~ 299 (440)
T PTZ00036 220 NLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMN 299 (440)
T ss_pred hccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhc
Confidence 65432 345778999999998764 58999999999999999999998886542111100000
Q ss_pred --------cccccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 266 --------QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 266 --------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
..+....+...++...+.++.+|+.+||..||.+|||+.+++.|-+
T Consensus 300 ~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~ 353 (440)
T PTZ00036 300 PNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPF 353 (440)
T ss_pred hhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChh
Confidence 0000001111233345678999999999999999999999998843
|
|
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-42 Score=334.19 Aligned_cols=242 Identities=17% Similarity=0.234 Sum_probs=197.4
Q ss_pred ccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCC---CccHHHHHHHHHHHhcCC-CCceeeeeeeeeeCCceEEEEe
Q 011519 59 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVAE 133 (484)
Q Consensus 59 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~lv~E 133 (484)
+++++.||+|+||+||+|. ..+++.||||++.... ....+.+..|..++..+. |++|+++++++...+..++|||
T Consensus 2 f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E 81 (323)
T cd05615 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVME 81 (323)
T ss_pred ceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEc
Confidence 3566778999999999999 4578999999997532 123456788999998885 5788899999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC----C
Q 011519 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----G 209 (484)
Q Consensus 134 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~----~ 209 (484)
|++||+|.+++. ..+.+++.++..++.||+.||.|||+. |++||||||+|||++.++.+||+|||+++.... .
T Consensus 82 y~~~g~L~~~i~--~~~~l~~~~~~~i~~qi~~al~~lH~~-~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~~ 158 (323)
T cd05615 82 YVNGGDLMYHIQ--QVGKFKEPQAVFYAAEISVGLFFLHRR-GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTT 158 (323)
T ss_pred CCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHeEECCCCCEEEeccccccccCCCCccc
Confidence 999999999986 445699999999999999999999998 999999999999999999999999999875432 2
Q ss_pred CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHH
Q 011519 210 RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289 (484)
Q Consensus 210 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 289 (484)
....||+.|+|||++.+..++.++|||||||++|+|+||+.||.............. . ...++...+.++.+++
T Consensus 159 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~----~--~~~~p~~~~~~~~~li 232 (323)
T cd05615 159 RTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIME----H--NVSYPKSLSKEAVSIC 232 (323)
T ss_pred cCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHh----C--CCCCCccCCHHHHHHH
Confidence 345689999999999988899999999999999999999998865432222111111 1 1123455677899999
Q ss_pred HHHhccCCCCCCCh-----HHHHHH
Q 011519 290 SRCLQYEPRERPNP-----RSLVTA 309 (484)
Q Consensus 290 ~~cl~~dp~~Rps~-----~~il~~ 309 (484)
.+||+.+|.+|++. .++.+|
T Consensus 233 ~~~l~~~p~~R~~~~~~~~~~i~~h 257 (323)
T cd05615 233 KGLMTKHPSKRLGCGPEGERDIREH 257 (323)
T ss_pred HHHcccCHhhCCCCCCCCHHHHhcC
Confidence 99999999999974 455544
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-42 Score=324.45 Aligned_cols=239 Identities=24% Similarity=0.354 Sum_probs=194.5
Q ss_pred cCCCCCCceEEEEEeC-CC-------cEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecC
Q 011519 64 EHGEKAPNVVYKGKLE-NQ-------FRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 64 ~lG~G~~g~Vy~~~~~-~~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~ 135 (484)
.||.|+||.||+|... .+ ..|++|.+........+.+..|+.+++.++||||+++++++..++..++||||+
T Consensus 2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~ 81 (258)
T cd05078 2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYV 81 (258)
T ss_pred CCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEecC
Confidence 5799999999999843 22 348888886554444567899999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCC--------ceeeccCCccccC
Q 011519 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN--------PRLSCFGLMKNSR 207 (484)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~--------~kl~DfG~a~~~~ 207 (484)
++|+|.+++... +..+++..+..++.||+.||.|||+. |++||||||+||+++.++. ++++|||++....
T Consensus 82 ~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~-~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~ 159 (258)
T cd05078 82 KFGSLDTYLKKN-KNLINISWKLEVAKQLAWALHFLEDK-GLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVL 159 (258)
T ss_pred CCCcHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCccceEEEecccccccCCCceEEecccccccccC
Confidence 999999999642 34689999999999999999999999 9999999999999987765 6999999988776
Q ss_pred CCCcccCCCCCCCcccccCC-CCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHH
Q 011519 208 DGRSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 286 (484)
Q Consensus 208 ~~~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 286 (484)
......+++.|+|||++.+. .++.++||||||+++|+|++|..+|............. .. ...++...+.++.
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~~----~~--~~~~~~~~~~~~~ 233 (258)
T cd05078 160 PKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQFY----ED--RHQLPAPKWTELA 233 (258)
T ss_pred CchhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHHH----Hc--cccCCCCCcHHHH
Confidence 66667788999999999864 47999999999999999999965443221111110000 00 1123444557899
Q ss_pred HHHHHHhccCCCCCCChHHHHHHH
Q 011519 287 RLASRCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 287 ~li~~cl~~dp~~Rps~~~il~~l 310 (484)
+|+.+||+.||++|||++++++.|
T Consensus 234 ~li~~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 234 NLINQCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred HHHHHHhccChhhCCCHHHHHHhc
Confidence 999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-41 Score=319.81 Aligned_cols=238 Identities=19% Similarity=0.343 Sum_probs=191.9
Q ss_pred cCCCCCCceEEEEEeCC-------------CcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEE
Q 011519 64 EHGEKAPNVVYKGKLEN-------------QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (484)
Q Consensus 64 ~lG~G~~g~Vy~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 130 (484)
.||+|+||.||+|+..+ ...|++|.+..........|.+|+.+++.++||||+++++++......++
T Consensus 2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~l 81 (262)
T cd05077 2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENIM 81 (262)
T ss_pred ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCEE
Confidence 57999999999998422 23589998876544445578899999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCC-------ceeeccCCc
Q 011519 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN-------PRLSCFGLM 203 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~-------~kl~DfG~a 203 (484)
||||+++|+|..++.. ....+++..++.++.||+.||.|||+. +++||||||+|||++.++. ++++|||++
T Consensus 82 v~e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~ 159 (262)
T cd05077 82 VEEFVEFGPLDLFMHR-KSDVLTTPWKFKVAKQLASALSYLEDK-DLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIP 159 (262)
T ss_pred EEecccCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHhhhC-CeECCCCCcccEEEecCCccCCCCceeEeCCCCCC
Confidence 9999999999998853 345689999999999999999999999 9999999999999987664 899999998
Q ss_pred cccCCCCcccCCCCCCCccccc-CCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHH
Q 011519 204 KNSRDGRSYSTNLAFTPPEYLR-TGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 281 (484)
Q Consensus 204 ~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (484)
..........+++.|+|||.+. +..++.++|||||||++|||++ |..|+.......... ...... ......
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~-----~~~~~~--~~~~~~ 232 (262)
T cd05077 160 ITVLSRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKER-----FYEGQC--MLVTPS 232 (262)
T ss_pred ccccCcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHH-----HHhcCc--cCCCCC
Confidence 8766655667889999999987 4568999999999999999984 666654332211110 000000 111223
Q ss_pred HHHHHHHHHHHhccCCCCCCChHHHHHHH
Q 011519 282 GTELVRLASRCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 282 ~~~l~~li~~cl~~dp~~Rps~~~il~~l 310 (484)
+.++.+|+.+||+.||.+||++.+|++++
T Consensus 233 ~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 233 CKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred hHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 56899999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-41 Score=324.53 Aligned_cols=247 Identities=19% Similarity=0.233 Sum_probs=201.1
Q ss_pred cccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCc---cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecC
Q 011519 60 NIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 60 ~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~ 135 (484)
.+.+.||.|+||+||+++ ..+++.||+|.+...... ....+.+|+.+++.++|+||+.+.+.+..++..++||||+
T Consensus 3 ~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 82 (285)
T cd05632 3 RQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTIM 82 (285)
T ss_pred eEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEec
Confidence 344567999999999999 457889999998654322 2345788999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC---Ccc
Q 011519 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---RSY 212 (484)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~---~~~ 212 (484)
++++|.+++.......+++..+..++.|++.||.|||+. ||+||||||+||++++++.++|+|||++...... ...
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~-~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~ 161 (285)
T cd05632 83 NGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRE-NTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIRGR 161 (285)
T ss_pred cCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeecCCCHHHEEECCCCCEEEecCCcceecCCCCcccCC
Confidence 999999988654455799999999999999999999998 9999999999999999999999999998765432 235
Q ss_pred cCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHH
Q 011519 213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRC 292 (484)
Q Consensus 213 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 292 (484)
.|+..|+|||++.+..++.++|+||||+++|+|++|..||................... ...++...+..+.+|+..|
T Consensus 162 ~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~ 239 (285)
T cd05632 162 VGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLET--EEVYSAKFSEEAKSICKML 239 (285)
T ss_pred CCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhcc--ccccCccCCHHHHHHHHHH
Confidence 67899999999998889999999999999999999999886532221111111111111 1123445567899999999
Q ss_pred hccCCCCCCC-----hHHHHHH
Q 011519 293 LQYEPRERPN-----PRSLVTA 309 (484)
Q Consensus 293 l~~dp~~Rps-----~~~il~~ 309 (484)
|+.||++||+ +.+++.+
T Consensus 240 l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 240 LTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred ccCCHhHcCCCcccChHHHHcC
Confidence 9999999999 7788877
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-41 Score=326.56 Aligned_cols=256 Identities=20% Similarity=0.280 Sum_probs=204.9
Q ss_pred CCcccccccCCCCCCceEEEEEeC-CC--cEEEEEEecCCC-CccHHHHHHHHHHHhcC-CCCceeeeeeeeeeCCceEE
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKLE-NQ--FRIAVKRFNRSA-WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLL 130 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~~-~~--~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~l 130 (484)
|++|.+.+.||.|+||.||+|+.. ++ ..+++|.++... ....+.|.+|+.++.++ +||||+++++++...+..++
T Consensus 1 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 80 (297)
T cd05089 1 WEDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYI 80 (297)
T ss_pred CccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceE
Confidence 456788888999999999999853 44 347888887432 22356789999999999 79999999999999999999
Q ss_pred EEecCCCCCHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCce
Q 011519 131 VAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPR 196 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~k 196 (484)
||||+++|+|.+++.... ...+++..++.++.|++.||+|||+. |++||||||+|||+++++.+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~-~ivH~dlkp~Nill~~~~~~k 159 (297)
T cd05089 81 AIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK-QFIHRDLAARNVLVGENLASK 159 (297)
T ss_pred EEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCcCCcceEEECCCCeEE
Confidence 999999999999996421 13588999999999999999999998 999999999999999999999
Q ss_pred eeccCCccccCCC---CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhcccccccccc
Q 011519 197 LSCFGLMKNSRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSC 272 (484)
Q Consensus 197 l~DfG~a~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 272 (484)
|+|||++...... .....+..|+|||++.+..++.++|||||||++|||++ |..||...............
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~----- 234 (297)
T cd05089 160 IADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQG----- 234 (297)
T ss_pred ECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcC-----
Confidence 9999998653321 11223457999999988889999999999999999998 88887654332221111111
Q ss_pred ccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhcCC
Q 011519 273 LEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (484)
Q Consensus 273 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 317 (484)
.....+..++..+.+|+.+||+.+|.+|||+.++++.|..+....
T Consensus 235 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~ 279 (297)
T cd05089 235 YRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEAR 279 (297)
T ss_pred CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 111233446678999999999999999999999999998876543
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-41 Score=324.03 Aligned_cols=254 Identities=20% Similarity=0.308 Sum_probs=201.0
Q ss_pred cccccccCCCCCCceEEEEEe-----CCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeee--CCceEE
Q 011519 58 MENIVSEHGEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE--GDERLL 130 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~--~~~~~l 130 (484)
.+++++.||+|+||+||++.. .++..||||.+........+.|.+|+++++.++||||+++++++.. ....++
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 84 (284)
T cd05081 5 HLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRL 84 (284)
T ss_pred cceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEE
Confidence 567788899999999999974 3578999999976654556789999999999999999999998754 346899
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCC
Q 011519 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR 210 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 210 (484)
||||+++|+|.+++.. ....+++..++.++.|++.||.|||+. |++||||||+||++++++.+||+|||++.......
T Consensus 85 v~e~~~~~~L~~~l~~-~~~~l~~~~~~~~~~~l~~aL~~LH~~-~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~ 162 (284)
T cd05081 85 VMEYLPYGSLRDYLQK-HRERLDHRKLLLYASQICKGMEYLGSK-RYVHRDLATRNILVESENRVKIGDFGLTKVLPQDK 162 (284)
T ss_pred EEEecCCCCHHHHHHh-cCcCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCHhhEEECCCCeEEECCCcccccccCCC
Confidence 9999999999999964 234689999999999999999999999 99999999999999999999999999988754332
Q ss_pred c-------ccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhh--cc---------cccccccc
Q 011519 211 S-------YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD--RN---------IQTLTDSC 272 (484)
Q Consensus 211 ~-------~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~--~~---------~~~~~~~~ 272 (484)
. ..++..|+|||++.+..++.++||||||++++||++|..++.......... .. +.......
T Consensus 163 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (284)
T cd05081 163 EYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNN 242 (284)
T ss_pred cceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcC
Confidence 1 122345999999988889999999999999999999876543222111100 00 00001111
Q ss_pred ccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhh
Q 011519 273 LEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL 313 (484)
Q Consensus 273 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~ 313 (484)
.....+...+..+.+|+.+||..+|++|||+.+|+..|+.+
T Consensus 243 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 243 GRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred CcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 11122344567899999999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-41 Score=344.75 Aligned_cols=253 Identities=17% Similarity=0.144 Sum_probs=208.0
Q ss_pred CcccccccCCCCCCceEEEEEeCCC-cEEEEEEecCCCCccHHHHHHHHHHHhcCC-CCceeeeeeee-ee------CCc
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLENQ-FRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCC-CE------GDE 127 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~-~~------~~~ 127 (484)
....|.+.|.+|||+.||+|....+ ..||+|++-.......+...+||++|+.|+ |+|||.+++.. .. .-+
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~E 116 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWE 116 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeE
Confidence 4567788899999999999996554 999999987766666788999999999997 99999999932 11 135
Q ss_pred eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcC-CCcccccccccceeecCCCCceeeccCCcccc
Q 011519 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK-ERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 206 (484)
Q Consensus 128 ~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~-~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~ 206 (484)
++|.||||.||+|.+++..+-...|++.++++|+.|+++|+.+||.. ..|||||||-+||||+.+|..||||||.+...
T Consensus 117 vllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~ 196 (738)
T KOG1989|consen 117 VLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSATTK 196 (738)
T ss_pred EEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCcccccccc
Confidence 78999999999999999766566699999999999999999999997 35999999999999999999999999998753
Q ss_pred CCCC-------------cccCCCCCCCccccc---CCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcccccccc
Q 011519 207 RDGR-------------SYSTNLAFTPPEYLR---TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTD 270 (484)
Q Consensus 207 ~~~~-------------~~~~t~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~ 270 (484)
.... ...+|+.|+|||++. +..+++|+|||+|||+||.|+....||.....- .+..
T Consensus 197 ~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l--------aIln 268 (738)
T KOG1989|consen 197 ILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL--------AILN 268 (738)
T ss_pred cCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce--------eEEe
Confidence 3221 224689999999875 567999999999999999999999998654211 1111
Q ss_pred ccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhcCC
Q 011519 271 SCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (484)
Q Consensus 271 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 317 (484)
....-...+..+..+.+||..||+.||++||++-+++..+..+....
T Consensus 269 g~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~ 315 (738)
T KOG1989|consen 269 GNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKP 315 (738)
T ss_pred ccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCC
Confidence 11111122567899999999999999999999999999988876543
|
|
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-41 Score=325.15 Aligned_cols=256 Identities=17% Similarity=0.203 Sum_probs=206.6
Q ss_pred HHHHhcCCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCc
Q 011519 49 LRTATSGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDE 127 (484)
Q Consensus 49 ~~~~~~~f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~ 127 (484)
+..--...+.|++++.||.|+||.||+|.. .++..|++|.+........+.+.+|+.+++.++||||+++++.+...+.
T Consensus 4 ~~~~~~~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 83 (292)
T cd06644 4 VRRDLDPNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGK 83 (292)
T ss_pred hhcccCcchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCe
Confidence 333344456788999999999999999995 5688999999987655556779999999999999999999999999999
Q ss_pred eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccC
Q 011519 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 207 (484)
Q Consensus 128 ~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~ 207 (484)
.++||||+++++|..++.+ ....+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++....
T Consensus 84 ~~lv~e~~~~~~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lH~~-~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~ 161 (292)
T cd06644 84 LWIMIEFCPGGAVDAIMLE-LDRGLTEPQIQVICRQMLEALQYLHSM-KIIHRDLKAGNVLLTLDGDIKLADFGVSAKNV 161 (292)
T ss_pred EEEEEecCCCCcHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHhcC-CeeecCCCcceEEEcCCCCEEEccCccceecc
Confidence 9999999999999988754 235689999999999999999999998 99999999999999999999999999987543
Q ss_pred CC----CcccCCCCCCCcccccC-----CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCC
Q 011519 208 DG----RSYSTNLAFTPPEYLRT-----GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFS 278 (484)
Q Consensus 208 ~~----~~~~~t~~y~aPE~~~~-----~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (484)
.. ....+++.|+|||++.+ ..++.++|||||||++|+|++|..|+............... .. .....+
T Consensus 162 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~-~~--~~~~~~ 238 (292)
T cd06644 162 KTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS-EP--PTLSQP 238 (292)
T ss_pred ccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcC-CC--ccCCCC
Confidence 22 34467889999999853 34688999999999999999999887543211111011000 00 011123
Q ss_pred hHHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 279 SDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 279 ~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
...+.++.+++.+||..||++||++.+++++
T Consensus 239 ~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 269 (292)
T cd06644 239 SKWSMEFRDFLKTALDKHPETRPSAAQLLEH 269 (292)
T ss_pred cccCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 4456789999999999999999999999987
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-41 Score=318.99 Aligned_cols=246 Identities=16% Similarity=0.201 Sum_probs=205.2
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCC-CccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecC
Q 011519 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~ 135 (484)
+|++++.||.|+||.||++. ..++..||+|.++... ....+.+.+|+.+++.++||||+++++.+...+..++||||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 35678889999999999999 4578899999986433 233567889999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----Cc
Q 011519 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RS 211 (484)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~----~~ 211 (484)
++|+|.+++.......+++..++.++.||+.||.|||+. |++|+||||+||++++++.++|+|||++...... ..
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~-~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~ 159 (255)
T cd08219 81 DGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEK-RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACT 159 (255)
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhC-CcccCCCCcceEEECCCCcEEEcccCcceeeccccccccc
Confidence 999999998654556789999999999999999999998 9999999999999999999999999998765432 24
Q ss_pred ccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHH
Q 011519 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291 (484)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 291 (484)
..+++.|+|||++.+..++.++|+||||+++|+|++|..||............... .....+...+..+.+|+.+
T Consensus 160 ~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~ 234 (255)
T cd08219 160 YVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQG-----SYKPLPSHYSYELRSLIKQ 234 (255)
T ss_pred ccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcC-----CCCCCCcccCHHHHHHHHH
Confidence 56788999999998888999999999999999999999988654322221111111 1112334456789999999
Q ss_pred HhccCCCCCCChHHHHHH
Q 011519 292 CLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 292 cl~~dp~~Rps~~~il~~ 309 (484)
||..||++|||+.+++..
T Consensus 235 ~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 235 MFKRNPRSRPSATTILSR 252 (255)
T ss_pred HHhCCcccCCCHHHHhhc
Confidence 999999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-41 Score=323.29 Aligned_cols=248 Identities=21% Similarity=0.338 Sum_probs=198.6
Q ss_pred cccccccCCCCCCceEEEEEeC------CCcEEEEEEecCCCC-ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEE
Q 011519 58 MENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 130 (484)
+|++.+.||+|+||.||+|... .+..||||.+..... .....|.+|+.+++.++||||+++++++......++
T Consensus 7 ~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~l 86 (277)
T cd05062 7 KITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLV 86 (277)
T ss_pred HceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCeEE
Confidence 4567788899999999999742 356799999865432 234568999999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCC--------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCC
Q 011519 131 VAEYMPNDTLAKHLFHWE--------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGL 202 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~ 202 (484)
||||+++|+|.+++.+.. ...+++..+..++.|++.||.|||+. |++|+||||+||++++++.++|+|||+
T Consensus 87 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~-~~vH~dlkp~Nil~~~~~~~~l~dfg~ 165 (277)
T cd05062 87 IMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFGM 165 (277)
T ss_pred EEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCcchheEEEcCCCCEEECCCCC
Confidence 999999999999986421 12467889999999999999999998 999999999999999999999999999
Q ss_pred ccccCCCC------cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccC
Q 011519 203 MKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEG 275 (484)
Q Consensus 203 a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 275 (484)
+....... ...+++.|+|||++.++.++.++|||||||++|||++ |..|+............... ...
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~-----~~~ 240 (277)
T cd05062 166 TRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEG-----GLL 240 (277)
T ss_pred ccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC-----CcC
Confidence 87543321 2334678999999998889999999999999999999 56666543222111111110 011
Q ss_pred CCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 276 QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 276 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
..+...+..+.+++.+||+.||++|||+.+++..|+
T Consensus 241 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 241 DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 233445678999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-41 Score=324.00 Aligned_cols=251 Identities=22% Similarity=0.310 Sum_probs=203.7
Q ss_pred cccccccCCCCCCceEEEEEeC------CCcEEEEEEecCCCC-ccHHHHHHHHHHHhcC-CCCceeeeeeeeeeCCceE
Q 011519 58 MENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAW-PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL 129 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~ 129 (484)
+|++++.||+|+||.||++... ....+|+|.+..... .....+.+|+.++.++ +||||+++++++...+..+
T Consensus 13 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~ 92 (293)
T cd05053 13 RLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLY 92 (293)
T ss_pred HeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCeE
Confidence 4677788899999999999843 236799999875432 2345688999999999 7999999999999999999
Q ss_pred EEEecCCCCCHHhhhccC--------------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCc
Q 011519 130 LVAEYMPNDTLAKHLFHW--------------ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNP 195 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~~--------------~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~ 195 (484)
+||||+++|+|.+++... ....+++..++.++.|++.||.|||+. +++||||||+|||+++++.+
T Consensus 93 li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~-~ivH~dlkp~Nil~~~~~~~ 171 (293)
T cd05053 93 VVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK-KCIHRDLAARNVLVTEDHVM 171 (293)
T ss_pred EEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC-CccccccceeeEEEcCCCeE
Confidence 999999999999999532 235689999999999999999999998 99999999999999999999
Q ss_pred eeeccCCccccCCCC------cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhcccccc
Q 011519 196 RLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTL 268 (484)
Q Consensus 196 kl~DfG~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~ 268 (484)
||+|||+++...... ...+++.|+|||++.+..++.++|||||||++|||++ |..|+..............
T Consensus 172 kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~-- 249 (293)
T cd05053 172 KIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKE-- 249 (293)
T ss_pred EeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHHHHHc--
Confidence 999999988654321 2234567999999988889999999999999999998 8777764432222111111
Q ss_pred ccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhh
Q 011519 269 TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQ 314 (484)
Q Consensus 269 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~ 314 (484)
......+...+..+.+|+.+||..||++|||+.++++.|+.+.
T Consensus 250 ---~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 250 ---GYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred ---CCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 1111234455678999999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-41 Score=317.69 Aligned_cols=248 Identities=26% Similarity=0.388 Sum_probs=206.7
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCC
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~ 136 (484)
.++++.+.||.|+||.||+|... |+.||||.++.... ..+++.+|+.+++.++|+||+++++++...+..++||||++
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 83 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMA 83 (256)
T ss_pred hhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecC
Confidence 35677788899999999999874 67899999976543 46679999999999999999999999998899999999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCCc-ccCC
Q 011519 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS-YSTN 215 (484)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~-~~~t 215 (484)
+++|.+++.......+++..+..++.|++.||.|||+. |++|+||||+||+++.++.++|+|||+++....... ...+
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~-~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~~~~~~ 162 (256)
T cd05039 84 KGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEK-NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKLP 162 (256)
T ss_pred CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CccchhcccceEEEeCCCCEEEcccccccccccccccCCCc
Confidence 99999999754445799999999999999999999998 999999999999999999999999999887644322 2335
Q ss_pred CCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHHhc
Q 011519 216 LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ 294 (484)
Q Consensus 216 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 294 (484)
..|+|||++.+..++.++||||||+++++|++ |..|+.............. ......+...++.+.+++.+||.
T Consensus 163 ~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~li~~~l~ 237 (256)
T cd05039 163 VKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEK-----GYRMEAPEGCPPEVYKVMKDCWE 237 (256)
T ss_pred ccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhc-----CCCCCCccCCCHHHHHHHHHHhc
Confidence 67999999988889999999999999999997 8877654433222111111 11112334456889999999999
Q ss_pred cCCCCCCChHHHHHHHHh
Q 011519 295 YEPRERPNPRSLVTALVT 312 (484)
Q Consensus 295 ~dp~~Rps~~~il~~l~~ 312 (484)
.+|++|||+.+++..|..
T Consensus 238 ~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 238 LDPAKRPTFKQLREQLAL 255 (256)
T ss_pred cChhhCcCHHHHHHHHhc
Confidence 999999999999999875
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-41 Score=332.64 Aligned_cols=241 Identities=18% Similarity=0.221 Sum_probs=195.0
Q ss_pred cCCCCCCceEEEEE-eCCCcEEEEEEecCCCC---ccHHHHHHHHHHHhcC-CCCceeeeeeeeeeCCceEEEEecCCCC
Q 011519 64 EHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMPND 138 (484)
Q Consensus 64 ~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~Ey~~~g 138 (484)
.||+|+||+||+|. ..+++.||||+++.... ...+.+.+|+.++.++ +||||+++++++...+..++||||+++|
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 81 (327)
T cd05617 2 VIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNGG 81 (327)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCCC
Confidence 57999999999999 45688999999976432 2245688999999888 6999999999999999999999999999
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC----CCcccC
Q 011519 139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYST 214 (484)
Q Consensus 139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~----~~~~~~ 214 (484)
+|..++. ..+.+++..+..++.||+.||.|||+. |++||||||+|||++.++.+||+|||+++.... .....|
T Consensus 82 ~L~~~~~--~~~~l~~~~~~~~~~qi~~al~~lH~~-~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g 158 (327)
T cd05617 82 DLMFHMQ--RQRKLPEEHARFYAAEICIALNFLHER-GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCG 158 (327)
T ss_pred cHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceecccC
Confidence 9999886 345799999999999999999999999 999999999999999999999999999875321 234568
Q ss_pred CCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHH---hhhccccccccccccCCCChHHHHHHHHHHHH
Q 011519 215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDL---IRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291 (484)
Q Consensus 215 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 291 (484)
|+.|+|||++.+..++.++|||||||++|+|++|..||....... ........+... ...+|...+..+.+++.+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~~p~~~~~~~~~li~~ 236 (327)
T cd05617 159 TPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEK--PIRIPRFLSVKASHVLKG 236 (327)
T ss_pred CcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhC--CCCCCCCCCHHHHHHHHH
Confidence 999999999998889999999999999999999999885321100 000000000010 112445567889999999
Q ss_pred HhccCCCCCCCh------HHHHHH
Q 011519 292 CLQYEPRERPNP------RSLVTA 309 (484)
Q Consensus 292 cl~~dp~~Rps~------~~il~~ 309 (484)
||..||.+|+++ .++++|
T Consensus 237 ~L~~dP~~R~~~~~~~~~~~i~~h 260 (327)
T cd05617 237 FLNKDPKERLGCQPQTGFSDIKSH 260 (327)
T ss_pred HhccCHHHcCCCCCCCCHHHHHcC
Confidence 999999999985 566665
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-41 Score=327.07 Aligned_cols=253 Identities=17% Similarity=0.242 Sum_probs=203.4
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecC
Q 011519 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~ 135 (484)
+|++++.||.|+||.||++. ..++..+|+|.+...... ...++.+|++++.+++||||+++++.+..++..++||||+
T Consensus 2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~ 81 (308)
T cd06615 2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHM 81 (308)
T ss_pred CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeecc
Confidence 46788889999999999999 456888999998754322 2456889999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC--CCccc
Q 011519 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD--GRSYS 213 (484)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~--~~~~~ 213 (484)
++++|.+++.. .+.+++..+..++.||+.||.|||+..+++|+||||+|||++.++.+||+|||++..... .....
T Consensus 82 ~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~ 159 (308)
T cd06615 82 DGGSLDQVLKK--AGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV 159 (308)
T ss_pred CCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCcccccccccccCC
Confidence 99999999963 366899999999999999999999844899999999999999999999999999876533 23456
Q ss_pred CCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhh---cccccccc--------------------
Q 011519 214 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD---RNIQTLTD-------------------- 270 (484)
Q Consensus 214 ~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~---~~~~~~~~-------------------- 270 (484)
+++.|+|||.+.+..++.++||||||+++|+|++|+.|+.......... ........
T Consensus 160 ~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (308)
T cd06615 160 GTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAI 239 (308)
T ss_pred CCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCccchhhH
Confidence 7899999999988889999999999999999999998875432111110 00000000
Q ss_pred -----cc---ccCCCC-hHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHh
Q 011519 271 -----SC---LEGQFS-SDEGTELVRLASRCLQYEPRERPNPRSLVTALVT 312 (484)
Q Consensus 271 -----~~---~~~~~~-~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~ 312 (484)
.. .....+ ..++.++.+|+.+||..||++|||+.+++++.+-
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~ 290 (308)
T cd06615 240 FELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFI 290 (308)
T ss_pred HHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhh
Confidence 00 000011 1246789999999999999999999999999654
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-41 Score=326.36 Aligned_cols=249 Identities=19% Similarity=0.268 Sum_probs=202.3
Q ss_pred cccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCcc---HHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecC
Q 011519 60 NIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD---ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 60 ~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~ 135 (484)
++.+.||+|+||+||++. ..+++.||||.+....... ...+.+|+.++++++|+||+.+++.+.+.+..++||||+
T Consensus 3 ~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 82 (285)
T cd05630 3 RQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLM 82 (285)
T ss_pred eeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEec
Confidence 445667999999999999 5578999999986543222 345788999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC---Ccc
Q 011519 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---RSY 212 (484)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~---~~~ 212 (484)
++++|.+++.......+++..+..++.|++.||.|||+. +++||||||+||+++.++.++|+|||++...... ...
T Consensus 83 ~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~-~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 161 (285)
T cd05630 83 NGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQE-RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGR 161 (285)
T ss_pred CCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC-CEEeCCCCHHHEEECCCCCEEEeeccceeecCCCccccCC
Confidence 999999998654445699999999999999999999998 9999999999999999999999999998765433 234
Q ss_pred cCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHH
Q 011519 213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRC 292 (484)
Q Consensus 213 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 292 (484)
.|++.|+|||++.+..++.++||||||+++|+|++|..||......... ......... ....++...++++.+|+..|
T Consensus 162 ~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~li~~~ 239 (285)
T cd05630 162 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR-EEVERLVKE-VQEEYSEKFSPDARSLCKML 239 (285)
T ss_pred CCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchH-HHHHhhhhh-hhhhcCccCCHHHHHHHHHH
Confidence 6889999999999888999999999999999999999988643211000 001111111 01123445567899999999
Q ss_pred hccCCCCCCC-----hHHHHHHHH
Q 011519 293 LQYEPRERPN-----PRSLVTALV 311 (484)
Q Consensus 293 l~~dp~~Rps-----~~~il~~l~ 311 (484)
|+.||.+||| +.++++|-+
T Consensus 240 l~~~p~~R~s~~~~~~~~~~~h~~ 263 (285)
T cd05630 240 LCKDPKERLGCQGGGAREVKEHPL 263 (285)
T ss_pred hhcCHHHccCCCCCchHHHHcChh
Confidence 9999999999 889998744
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-41 Score=322.63 Aligned_cols=238 Identities=24% Similarity=0.371 Sum_probs=190.7
Q ss_pred cCCCCCCceEEEEEeCC-------------------------CcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeee
Q 011519 64 EHGEKAPNVVYKGKLEN-------------------------QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANL 118 (484)
Q Consensus 64 ~lG~G~~g~Vy~~~~~~-------------------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l 118 (484)
.||+|+||.||+|.... ...|++|++..........|.+|+.+++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 57999999999997311 24589999875543345678899999999999999999
Q ss_pred eeeeeeCCceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCC-----
Q 011519 119 LGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV----- 193 (484)
Q Consensus 119 ~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~----- 193 (484)
++++......++||||+++|+|..++.. ..+.+++..+..++.||+.||.|||++ +++||||||+|||++..+
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~-~iiH~dlkp~Nill~~~~~~~~~ 159 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRK-EKGRVPVAWKITVAQQLASALSYLEDK-NLVHGNVCAKNILLARLGLAEGT 159 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHcC-CccCCCCCcccEEEeccCcccCc
Confidence 9999999999999999999999999864 345689999999999999999999999 999999999999997543
Q ss_pred --CceeeccCCccccCCCCcccCCCCCCCcccccC-CCCCCCCceeehHHHHHHHh-hCCCCCCchhhHHhhhccccccc
Q 011519 194 --NPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLL-SGKHIPPSHALDLIRDRNIQTLT 269 (484)
Q Consensus 194 --~~kl~DfG~a~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~-tg~~p~~~~~~~~~~~~~~~~~~ 269 (484)
.+|++|||++..........+++.|+|||.+.+ ..++.++||||||+++|||+ +|..|+........... .
T Consensus 160 ~~~~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~-----~ 234 (274)
T cd05076 160 SPFIKLSDPGVSFTALSREERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKERF-----Y 234 (274)
T ss_pred cceeeecCCccccccccccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHHH-----H
Confidence 379999999876555455567889999998875 45899999999999999995 67776654322111110 0
Q ss_pred cccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHH
Q 011519 270 DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 270 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 310 (484)
.. ....+...++.+.+++.+||+.+|++|||+.++++.|
T Consensus 235 ~~--~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 235 EK--KHRLPEPSCKELATLISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred Hh--ccCCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence 00 0112233346799999999999999999999999887
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-43 Score=338.34 Aligned_cols=248 Identities=17% Similarity=0.215 Sum_probs=206.3
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCC
Q 011519 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~ 136 (484)
-++||+.||-|+||.||+++ ..++-..|.|+|........++|+-||++|..+.||+||+|++.|...+.+||+.|||.
T Consensus 33 ~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~ 112 (1187)
T KOG0579|consen 33 HWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCG 112 (1187)
T ss_pred HHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecC
Confidence 35899999999999999999 44566677898887776778899999999999999999999999999999999999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccC----CCCcc
Q 011519 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR----DGRSY 212 (484)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~----~~~~~ 212 (484)
||-++.++.. -++.+++.++.-+++|++.||.|||++ +|||||||..|||++-+|.++|+|||.+-... ...++
T Consensus 113 GGAVDaimlE-L~r~LtE~QIqvvc~q~ldALn~LHs~-~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkRDsF 190 (1187)
T KOG0579|consen 113 GGAVDAIMLE-LGRVLTEDQIQVVCYQVLDALNWLHSQ-NIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKRDSF 190 (1187)
T ss_pred CchHhHHHHH-hccccchHHHHHHHHHHHHHHHHHhhc-chhhhhccccceEEEecCcEeeecccccccchhHHhhhccc
Confidence 9999988865 456799999999999999999999999 99999999999999999999999999875432 24578
Q ss_pred cCCCCCCCccccc-----CCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHH
Q 011519 213 STNLAFTPPEYLR-----TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287 (484)
Q Consensus 213 ~~t~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (484)
.|||.|||||+.+ ..+|+.++||||||++|+||..+.+|...-....+.-.....-++ .-.-|...+..+.+
T Consensus 191 IGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSePP---TLlqPS~Ws~~F~D 267 (1187)
T KOG0579|consen 191 IGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPP---TLLQPSHWSRSFSD 267 (1187)
T ss_pred cCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcCCC---cccCcchhhhHHHH
Confidence 9999999999876 456999999999999999999999664322111111000000011 11235667889999
Q ss_pred HHHHHhccCCCCCCChHHHHHHH
Q 011519 288 LASRCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 288 li~~cl~~dp~~Rps~~~il~~l 310 (484)
|+..||.+||..||++.++++|-
T Consensus 268 fLk~cL~Knp~~Rp~aaqll~Hp 290 (1187)
T KOG0579|consen 268 FLKRCLVKNPRNRPPAAQLLKHP 290 (1187)
T ss_pred HHHHHHhcCCccCCCHHHHhhCc
Confidence 99999999999999999999884
|
|
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-42 Score=333.02 Aligned_cols=234 Identities=20% Similarity=0.215 Sum_probs=189.9
Q ss_pred cCCCCCCceEEEEEe-CCCcEEEEEEecCCCC---ccHHHHHHHHH-HHhcCCCCceeeeeeeeeeCCceEEEEecCCCC
Q 011519 64 EHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEAR-AVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 138 (484)
Q Consensus 64 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~-~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~~g 138 (484)
.||+|+||+||+|.. .+++.||+|++..... .....+..|.. +++.++||||+++++++...+..++||||+++|
T Consensus 2 ~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~~ 81 (325)
T cd05602 2 VIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGG 81 (325)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCCC
Confidence 579999999999994 5678899999865321 12234455544 567789999999999999999999999999999
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC----CCcccC
Q 011519 139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYST 214 (484)
Q Consensus 139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~----~~~~~~ 214 (484)
+|.+++. ..+.+++..+..++.||+.||.|||+. ||+||||||+|||++.++.+||+|||+++.... .....|
T Consensus 82 ~L~~~~~--~~~~~~~~~~~~~~~qi~~~L~~lH~~-giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~~~g 158 (325)
T cd05602 82 ELFYHLQ--RERCFLEPRARFYAAEIASALGYLHSL-NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFCG 158 (325)
T ss_pred cHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCcccccC
Confidence 9999996 345688999999999999999999999 999999999999999999999999999875322 234568
Q ss_pred CCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHHhc
Q 011519 215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ 294 (484)
Q Consensus 215 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 294 (484)
|+.|+|||++.+..++.++|||||||++|+|++|..||.............. . ...++...+..+.+++.+||+
T Consensus 159 t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~----~--~~~~~~~~~~~~~~li~~~l~ 232 (325)
T cd05602 159 TPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILN----K--PLQLKPNITNSARHLLEGLLQ 232 (325)
T ss_pred CccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHh----C--CcCCCCCCCHHHHHHHHHHcc
Confidence 9999999999988899999999999999999999998865432222111111 1 112334566889999999999
Q ss_pred cCCCCCCChHHH
Q 011519 295 YEPRERPNPRSL 306 (484)
Q Consensus 295 ~dp~~Rps~~~i 306 (484)
.||.+||++.+.
T Consensus 233 ~~p~~R~~~~~~ 244 (325)
T cd05602 233 KDRTKRLGAKDD 244 (325)
T ss_pred cCHHHCCCCCCC
Confidence 999999987743
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-41 Score=324.00 Aligned_cols=250 Identities=17% Similarity=0.240 Sum_probs=207.4
Q ss_pred hcCCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEE
Q 011519 53 TSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (484)
Q Consensus 53 ~~~f~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 131 (484)
.+-...|.+++.||.|+||+||+|. ..+++.|+||.+........+.+.+|+.+++.++||||+++++++...+..++|
T Consensus 15 ~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 94 (296)
T cd06655 15 GDPKKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVV 94 (296)
T ss_pred CCCcceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEE
Confidence 3334568888999999999999999 567899999999766555567789999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC--
Q 011519 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 209 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~-- 209 (484)
+||+++++|..++. ...+++.++..++.|++.||.|||+. |++|+||||+||+++.++.+||+|||++......
T Consensus 95 ~e~~~~~~L~~~~~---~~~l~~~~~~~i~~~l~~al~~LH~~-~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 170 (296)
T cd06655 95 MEYLAGGSLTDVVT---ETCMDEAQIAAVCRECLQALEFLHAN-QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS 170 (296)
T ss_pred EEecCCCcHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCCCEEEccCccchhcccccc
Confidence 99999999999985 34689999999999999999999999 9999999999999999999999999998765432
Q ss_pred --CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHH
Q 011519 210 --RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287 (484)
Q Consensus 210 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (484)
....++..|+|||.+.+..++.++|||||||++|+|++|+.||............... .......+...++.+.+
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 247 (296)
T cd06655 171 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN---GTPELQNPEKLSPIFRD 247 (296)
T ss_pred cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc---CCcccCCcccCCHHHHH
Confidence 2346788999999999888999999999999999999999887653221111000000 00011123445678999
Q ss_pred HHHHHhccCCCCCCChHHHHHH
Q 011519 288 LASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 288 li~~cl~~dp~~Rps~~~il~~ 309 (484)
++.+||..||.+|||+.+++.+
T Consensus 248 li~~~l~~dp~~Rpt~~~il~~ 269 (296)
T cd06655 248 FLNRCLEMDVEKRGSAKELLQH 269 (296)
T ss_pred HHHHHhhcChhhCCCHHHHhhC
Confidence 9999999999999999999988
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-41 Score=317.87 Aligned_cols=247 Identities=22% Similarity=0.324 Sum_probs=202.3
Q ss_pred cccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCCC
Q 011519 58 MENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPN 137 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~~ 137 (484)
.+++.+.||+|+||.||+|....+..||+|.+.... ...+.+.+|+.+++.++|||++++++++. .+..++||||+++
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~ 84 (260)
T cd05069 7 SLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMGK 84 (260)
T ss_pred HeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCCC
Confidence 467778899999999999997776789999986543 23467899999999999999999999875 4568999999999
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCC-----cc
Q 011519 138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-----SY 212 (484)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~-----~~ 212 (484)
|+|.+++.......+++..+..++.|++.||.|||+. |++|+||||+||++++++.++|+|||++....... ..
T Consensus 85 ~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~-~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 163 (260)
T cd05069 85 GSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERM-NYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGA 163 (260)
T ss_pred CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CEeecccCcceEEEcCCCeEEECCCccceEccCCcccccCCC
Confidence 9999999754555689999999999999999999998 99999999999999999999999999987654321 22
Q ss_pred cCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHH
Q 011519 213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291 (484)
Q Consensus 213 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 291 (484)
.++..|+|||.+.+..++.++||||||+++|+|+| |..|+............... .....+...+..+.+++.+
T Consensus 164 ~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~ 238 (260)
T cd05069 164 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERG-----YRMPCPQGCPESLHELMKL 238 (260)
T ss_pred ccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-----CCCCCCcccCHHHHHHHHH
Confidence 34578999999988889999999999999999999 77776554322221111111 1112344567889999999
Q ss_pred HhccCCCCCCChHHHHHHHHh
Q 011519 292 CLQYEPRERPNPRSLVTALVT 312 (484)
Q Consensus 292 cl~~dp~~Rps~~~il~~l~~ 312 (484)
||..||++||++.++++.|+.
T Consensus 239 ~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 239 CWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred HccCCcccCcCHHHHHHHHhc
Confidence 999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-41 Score=326.45 Aligned_cols=250 Identities=18% Similarity=0.241 Sum_probs=208.2
Q ss_pred hcCCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEE
Q 011519 53 TSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (484)
Q Consensus 53 ~~~f~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 131 (484)
.+-...|.+++.||.|+||.||++. ..+++.||||.+........+.+.+|+.+++.++||||+++++++...+..++|
T Consensus 15 ~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 94 (297)
T cd06656 15 GDPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 94 (297)
T ss_pred CChhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEe
Confidence 3445778899999999999999999 467899999999876555567789999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC--
Q 011519 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 209 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~-- 209 (484)
|||+++++|.+++. ...+++.++..++.|++.||.|||+. |++|+||||+|||++.++.++|+|||++......
T Consensus 95 ~e~~~~~~L~~~~~---~~~~~~~~~~~~~~~l~~~L~~LH~~-~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~ 170 (297)
T cd06656 95 MEYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALDFLHSN-QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 170 (297)
T ss_pred ecccCCCCHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCCCEEECcCccceEccCCcc
Confidence 99999999999984 34589999999999999999999998 9999999999999999999999999998765432
Q ss_pred --CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHH
Q 011519 210 --RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287 (484)
Q Consensus 210 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (484)
....+++.|+|||.+.+..++.++|||||||++|+|++|..||........ ..............+...+..+.+
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 247 (297)
T cd06656 171 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA---LYLIATNGTPELQNPERLSAVFRD 247 (297)
T ss_pred CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchh---eeeeccCCCCCCCCccccCHHHHH
Confidence 234678899999999988899999999999999999999988754321110 000000011111233455678999
Q ss_pred HHHHHhccCCCCCCChHHHHHH
Q 011519 288 LASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 288 li~~cl~~dp~~Rps~~~il~~ 309 (484)
++.+||..+|++||++.+++.+
T Consensus 248 li~~~l~~~p~~Rps~~~il~~ 269 (297)
T cd06656 248 FLNRCLEMDVDRRGSAKELLQH 269 (297)
T ss_pred HHHHHccCChhhCcCHHHHhcC
Confidence 9999999999999999999997
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-41 Score=322.62 Aligned_cols=248 Identities=17% Similarity=0.200 Sum_probs=202.0
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCCC
Q 011519 59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPN 137 (484)
Q Consensus 59 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~~ 137 (484)
|++++.||.|+||.||+|.. .++..+++|.+........+.+.+|+.+++.++||||+++++++...+..++||||+++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~ 86 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 86 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence 56788899999999999995 46788999999765545567789999999999999999999999999999999999999
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----Cccc
Q 011519 138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSYS 213 (484)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~----~~~~ 213 (484)
++|..++.. ...++++..+..++.|++.||.|||+. |++|+||||+||+++.++.++|+|||++...... ....
T Consensus 87 ~~l~~~~~~-~~~~l~~~~~~~~~~qi~~~L~~LH~~-~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 164 (282)
T cd06643 87 GAVDAVMLE-LERPLTEPQIRVVCKQTLEALNYLHEN-KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI 164 (282)
T ss_pred CcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCcccEEEccCCCEEEcccccccccccccccccccc
Confidence 999998753 345799999999999999999999998 9999999999999999999999999998754322 3456
Q ss_pred CCCCCCCccccc-----CCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHH
Q 011519 214 TNLAFTPPEYLR-----TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288 (484)
Q Consensus 214 ~t~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 288 (484)
+++.|+|||++. +..++.++|||||||++|+|++|+.||.................. ....+...+..+.+|
T Consensus 165 ~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l 241 (282)
T cd06643 165 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPP---TLAQPSRWSSEFKDF 241 (282)
T ss_pred ccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCC---CCCCccccCHHHHHH
Confidence 789999999984 344788999999999999999999887543211111111000000 111234456789999
Q ss_pred HHHHhccCCCCCCChHHHHHHHH
Q 011519 289 ASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 289 i~~cl~~dp~~Rps~~~il~~l~ 311 (484)
+.+||+.||.+|||+.+++++-+
T Consensus 242 i~~~l~~~p~~Rp~~~~il~~~~ 264 (282)
T cd06643 242 LKKCLEKNVDARWTTTQLLQHPF 264 (282)
T ss_pred HHHHccCChhhCcCHHHHhcCCC
Confidence 99999999999999999998744
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-41 Score=323.02 Aligned_cols=251 Identities=20% Similarity=0.283 Sum_probs=203.3
Q ss_pred ccccccCCCCCCceEEEEEeC------CCcEEEEEEecCCCC-ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEE
Q 011519 59 ENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (484)
Q Consensus 59 ~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 131 (484)
+++.+.||+|+||.||+|+.. ....+++|.+..... ...+++.+|+.+++.++||||+++++.+...+..++|
T Consensus 2 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 81 (290)
T cd05045 2 LVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLI 81 (290)
T ss_pred ccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEE
Confidence 466788899999999999842 235799998875443 2356799999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCC----------------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceee
Q 011519 132 AEYMPNDTLAKHLFHWE----------------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF 189 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill 189 (484)
|||+++|+|.+++.... ...+++..++.++.|++.||.|||+. +++||||||+|||+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~ivH~dikp~nill 160 (290)
T cd05045 82 VEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM-KLVHRDLAARNVLV 160 (290)
T ss_pred EEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC-CeehhhhhhheEEE
Confidence 99999999999985321 13578999999999999999999998 99999999999999
Q ss_pred cCCCCceeeccCCccccCCC------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhh
Q 011519 190 DDDVNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRD 262 (484)
Q Consensus 190 ~~~~~~kl~DfG~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~ 262 (484)
++++.+||+|||+++..... ....++..|+|||.+.+..++.++||||||+++++|+| |..|+.......+..
T Consensus 161 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~ 240 (290)
T cd05045 161 AEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFN 240 (290)
T ss_pred cCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Confidence 99999999999998764322 12334678999999988889999999999999999999 887776443222211
Q ss_pred ccccccccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhc
Q 011519 263 RNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 315 (484)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~ 315 (484)
.. ........+...+.++.+++..||+.+|++||++.+++..|+.+..
T Consensus 241 ~~-----~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 241 LL-----KTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred HH-----hCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 11 1111122344556789999999999999999999999999988653
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-41 Score=325.22 Aligned_cols=250 Identities=15% Similarity=0.165 Sum_probs=194.9
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCc--cHHHHHHHHHHHhcC---CCCceeeeeeeeee-----CC
Q 011519 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQL---RNRRLANLLGCCCE-----GD 126 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l---~hpniv~l~~~~~~-----~~ 126 (484)
.|++++.||+|+||+||+|. ..+++.||+|.++..... ....+.+|+.+++.+ +||||+++++++.. ..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 36778889999999999999 457899999998754322 234566777777665 69999999998764 24
Q ss_pred ceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCcccc
Q 011519 127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 206 (484)
Q Consensus 127 ~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~ 206 (484)
..++||||+++ +|.+++.......+++..+..++.||+.||.|||+. |++||||||+|||++.++.+||+|||++...
T Consensus 81 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~dikp~Nili~~~~~~kl~dfg~~~~~ 158 (288)
T cd07863 81 KVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHAN-CIVHRDLKPENILVTSGGQVKLADFGLARIY 158 (288)
T ss_pred eEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEECCCCCEEECccCccccc
Confidence 57999999975 899998754455689999999999999999999999 9999999999999999999999999998865
Q ss_pred CCC---CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccc--------cccc------
Q 011519 207 RDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI--------QTLT------ 269 (484)
Q Consensus 207 ~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~--------~~~~------ 269 (484)
... ....+|+.|+|||++.+..++.++|||||||++|+|++|++||............. ....
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (288)
T cd07863 159 SCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLP 238 (288)
T ss_pred cCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCccccccc
Confidence 432 23467889999999998889999999999999999999998875432211100000 0000
Q ss_pred ccccc-------CCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 270 DSCLE-------GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 270 ~~~~~-------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
..... ....+..+..+.+|+.+||+.||++|||+.+++.|
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h 285 (288)
T cd07863 239 RGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH 285 (288)
T ss_pred ccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 00000 01112356778999999999999999999999976
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-41 Score=322.58 Aligned_cols=251 Identities=23% Similarity=0.319 Sum_probs=199.6
Q ss_pred cccccCCCCCCceEEEEE-----eCCCcEEEEEEecCCCC-ccHHHHHHHHHHHhcCCCCceeeeeeeeeeC--CceEEE
Q 011519 60 NIVSEHGEKAPNVVYKGK-----LENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEG--DERLLV 131 (484)
Q Consensus 60 ~~~~~lG~G~~g~Vy~~~-----~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~--~~~~lv 131 (484)
.+++.||+|+||+||++. ..++..||+|.++.... .....|.+|+++++.++||||+++++++... ...++|
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (283)
T cd05080 7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI 86 (283)
T ss_pred eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence 678889999999998865 24578899999976532 2356788999999999999999999987653 357999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCC-
Q 011519 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR- 210 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~- 210 (484)
|||+++|+|.+++.. ..+++.+++.++.|++.||.|||+. +++|+||||+|||++.++.++|+|||++.......
T Consensus 87 ~e~~~~~~l~~~~~~---~~l~~~~~~~i~~~l~~~l~~lH~~-~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~ 162 (283)
T cd05080 87 MEYVPLGSLRDYLPK---HKLNLAQLLLFAQQICEGMAYLHSQ-HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHE 162 (283)
T ss_pred ecCCCCCCHHHHHHH---cCCCHHHHHHHHHHHHHHHHHHHHC-CeeccccChheEEEcCCCcEEEeecccccccCCcch
Confidence 999999999999953 4599999999999999999999999 99999999999999999999999999988654321
Q ss_pred ------cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHH---hhhc-------ccccccccccc
Q 011519 211 ------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDL---IRDR-------NIQTLTDSCLE 274 (484)
Q Consensus 211 ------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~---~~~~-------~~~~~~~~~~~ 274 (484)
...++..|+|||.+.+..++.++||||||+++|+|+||..|+....... .... ...........
T Consensus 163 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (283)
T cd05080 163 YYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMR 242 (283)
T ss_pred hhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCC
Confidence 2234567999999988889999999999999999999998764321110 0000 00001111111
Q ss_pred CCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhh
Q 011519 275 GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQ 314 (484)
Q Consensus 275 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~ 314 (484)
...+...+..+.+++..||+.+|++|||+.++++.|+.+.
T Consensus 243 ~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 243 LPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred CCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 1234455689999999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-41 Score=337.56 Aligned_cols=252 Identities=19% Similarity=0.292 Sum_probs=202.0
Q ss_pred CcccccccCCCCCCceEEEEEeC------CCcEEEEEEecCCCCcc-HHHHHHHHHHHhcCC-CCceeeeeeeeeeCCce
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWPD-ARQFLEEARAVGQLR-NRRLANLLGCCCEGDER 128 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~ 128 (484)
+++.+.+.||+|+||.||+|++. .+..||||+++...... .+.+.+|+.+|.++. |||||++++++...+..
T Consensus 37 ~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~ 116 (401)
T cd05107 37 DNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPI 116 (401)
T ss_pred HHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCc
Confidence 34567788999999999999853 34689999997653332 446899999999997 99999999999999999
Q ss_pred EEEEecCCCCCHHhhhccCC------------------------------------------------------------
Q 011519 129 LLVAEYMPNDTLAKHLFHWE------------------------------------------------------------ 148 (484)
Q Consensus 129 ~lv~Ey~~~gsL~~~l~~~~------------------------------------------------------------ 148 (484)
++||||+++|+|.++++...
T Consensus 117 ~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (401)
T cd05107 117 YIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMK 196 (401)
T ss_pred EEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcch
Confidence 99999999999999996421
Q ss_pred ------------------------------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCC
Q 011519 149 ------------------------------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 192 (484)
Q Consensus 149 ------------------------------------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~ 192 (484)
...+++..++.++.||+.||.|||+. +++||||||+|||++++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~-~ivHrdlkp~NiLl~~~ 275 (401)
T cd05107 197 GTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK-NCVHRDLAARNVLICEG 275 (401)
T ss_pred hhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC-CcCcccCCcceEEEeCC
Confidence 12367888899999999999999998 99999999999999999
Q ss_pred CCceeeccCCccccCCC------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccc
Q 011519 193 VNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNI 265 (484)
Q Consensus 193 ~~~kl~DfG~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~ 265 (484)
+.+||+|||+++..... ....+++.|+|||.+.+..++.++|||||||++|||++ |..|+...........
T Consensus 276 ~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~-- 353 (401)
T cd05107 276 KLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYN-- 353 (401)
T ss_pred CEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHH--
Confidence 99999999998764321 12345678999999998889999999999999999998 7777654321111000
Q ss_pred cccccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhh
Q 011519 266 QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL 313 (484)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~ 313 (484)
..........+...+.++.+|+.+||..+|.+||++.+|+..|+.+
T Consensus 354 --~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~ 399 (401)
T cd05107 354 --AIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDL 399 (401)
T ss_pred --HHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 0011111123445578899999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-41 Score=319.27 Aligned_cols=245 Identities=18% Similarity=0.224 Sum_probs=201.3
Q ss_pred ccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCc-----cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEE
Q 011519 59 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP-----DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (484)
Q Consensus 59 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 132 (484)
|.+.+.||.|++|.||++. ..+++.||||.+...... ....+.+|+.++++++||||+++++++...+..++|+
T Consensus 4 ~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~ 83 (263)
T cd06625 4 WRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSIFM 83 (263)
T ss_pred ccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEEEE
Confidence 4555667999999999999 457899999998654221 2346889999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC---
Q 011519 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--- 209 (484)
Q Consensus 133 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~--- 209 (484)
||+++++|.+++. ..+.+++..+..++.|++.||.|||+. |++|+||+|+||++++++.++|+|||++......
T Consensus 84 e~~~~~~l~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lH~~-~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~ 160 (263)
T cd06625 84 EYMPGGSVKDQLK--AYGALTETVTRKYTRQILEGVEYLHSN-MIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSS 160 (263)
T ss_pred EECCCCcHHHHHH--HhCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCCCEEEeecccceeccccccc
Confidence 9999999999986 345689999999999999999999999 9999999999999999999999999998754332
Q ss_pred ----CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHH
Q 011519 210 ----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 285 (484)
Q Consensus 210 ----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 285 (484)
....++..|+|||++.+..++.++||||||+++|+|++|+.||........... .........++...+..+
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 236 (263)
T cd06625 161 GTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFK----IATQPTNPQLPSHVSPDA 236 (263)
T ss_pred cccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHH----HhccCCCCCCCccCCHHH
Confidence 234567889999999988899999999999999999999988754311111101 111111223455567889
Q ss_pred HHHHHHHhccCCCCCCChHHHHHHH
Q 011519 286 VRLASRCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 286 ~~li~~cl~~dp~~Rps~~~il~~l 310 (484)
.+++.+||..+|.+|||+.+++.+.
T Consensus 237 ~~li~~~l~~~p~~Rpt~~~ll~~~ 261 (263)
T cd06625 237 RNFLRRTFVENAKKRPSAEELLRHF 261 (263)
T ss_pred HHHHHHHhhcCcccCCCHHHHhhCC
Confidence 9999999999999999999999874
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-41 Score=320.51 Aligned_cols=248 Identities=15% Similarity=0.171 Sum_probs=201.2
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecC
Q 011519 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~ 135 (484)
.+|.+++.||+|+||.||+|. ..+++.||+|.++.........+.+|+.+++.++||||+++++.+...+..++||||+
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~ 88 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC 88 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence 356777888999999999999 4578999999997665445567889999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----Cc
Q 011519 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RS 211 (484)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~----~~ 211 (484)
++++|.+++. ..+.+++.++..++.|++.||.|||+. |++|+||||+||+++.++.++|+|||++...... ..
T Consensus 89 ~~~~L~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~ 165 (267)
T cd06645 89 GGGSLQDIYH--VTGPLSESQIAYVSRETLQGLYYLHSK-GKMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRKS 165 (267)
T ss_pred CCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEECCCCCEEECcceeeeEccCccccccc
Confidence 9999999986 345799999999999999999999999 9999999999999999999999999998754322 34
Q ss_pred ccCCCCCCCccccc---CCCCCCCCceeehHHHHHHHhhCCCCCCchhhHH-hhhccccccccccccCCCChHHHHHHHH
Q 011519 212 YSTNLAFTPPEYLR---TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDL-IRDRNIQTLTDSCLEGQFSSDEGTELVR 287 (484)
Q Consensus 212 ~~~t~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (484)
..|++.|+|||++. ...++.++|||||||++|+|++|..|+....... ...........+... .....+..+.+
T Consensus 166 ~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 243 (267)
T cd06645 166 FIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLK--DKMKWSNSFHH 243 (267)
T ss_pred ccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCccc--ccCCCCHHHHH
Confidence 56889999999974 4558899999999999999999998875322111 100000011111110 01134567999
Q ss_pred HHHHHhccCCCCCCChHHHHHH
Q 011519 288 LASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 288 li~~cl~~dp~~Rps~~~il~~ 309 (484)
++.+||+.+|++|||+.+++++
T Consensus 244 li~~~l~~~P~~R~~~~~ll~~ 265 (267)
T cd06645 244 FVKMALTKNPKKRPTAEKLLQH 265 (267)
T ss_pred HHHHHccCCchhCcCHHHHhcC
Confidence 9999999999999999999876
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-41 Score=326.53 Aligned_cols=251 Identities=20% Similarity=0.302 Sum_probs=202.6
Q ss_pred cccccccCCCCCCceEEEEEe------CCCcEEEEEEecCCCCc-cHHHHHHHHHHHhcC-CCCceeeeeeeeeeCCceE
Q 011519 58 MENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL 129 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~ 129 (484)
++.+.+.||+|+||.||+++. ..+..||||+++..... ..+.+.+|+.+++++ +||||+++++++...+..+
T Consensus 36 ~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~ 115 (302)
T cd05055 36 NLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPIL 115 (302)
T ss_pred HeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCceE
Confidence 456777889999999999973 23457999998754322 245789999999999 7999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC
Q 011519 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 209 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 209 (484)
+||||+++|+|.+++.......+++.++..++.||+.||.|||+. +++|+||||+|||++.++.++|+|||+++.....
T Consensus 116 lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~-~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~ 194 (302)
T cd05055 116 VITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASK-NCIHRDLAARNVLLTHGKIVKICDFGLARDIMND 194 (302)
T ss_pred EEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeehhhhccceEEEcCCCeEEECCCcccccccCC
Confidence 999999999999999754444589999999999999999999998 9999999999999999999999999998765432
Q ss_pred C------cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHH
Q 011519 210 R------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG 282 (484)
Q Consensus 210 ~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (484)
. ...+++.|+|||.+.+..++.++|||||||++|+|++ |..|+............ .........+...+
T Consensus 195 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~----~~~~~~~~~~~~~~ 270 (302)
T cd05055 195 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKL----IKEGYRMAQPEHAP 270 (302)
T ss_pred CceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHH----HHcCCcCCCCCCCC
Confidence 2 2234678999999998889999999999999999998 88776543222111011 11111111233446
Q ss_pred HHHHHHHHHHhccCCCCCCChHHHHHHHHhh
Q 011519 283 TELVRLASRCLQYEPRERPNPRSLVTALVTL 313 (484)
Q Consensus 283 ~~l~~li~~cl~~dp~~Rps~~~il~~l~~~ 313 (484)
..+.+++.+||..+|++|||+.+++..|..+
T Consensus 271 ~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 271 AEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred HHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 7899999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-41 Score=316.92 Aligned_cols=242 Identities=19% Similarity=0.287 Sum_probs=195.3
Q ss_pred cCCCCCCceEEEEEeC---CCcEEEEEEecCCCCcc-HHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCCCCC
Q 011519 64 EHGEKAPNVVYKGKLE---NQFRIAVKRFNRSAWPD-ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT 139 (484)
Q Consensus 64 ~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~~gs 139 (484)
.||+|+||.||+|++. .+..||||++....... .+.|.+|+.++++++||||+++++++. .+..++||||+++|+
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence 4799999999999743 35679999987654322 456899999999999999999999875 457899999999999
Q ss_pred HHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCC-------cc
Q 011519 140 LAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-------SY 212 (484)
Q Consensus 140 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~-------~~ 212 (484)
|.+++.. ....+++..++.++.||+.||.|||+. |++|+||||+|||++.++.+||+|||++....... ..
T Consensus 81 L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 158 (257)
T cd05115 81 LNKFLSG-KKDEITVSNVVELMHQVSMGMKYLEGK-NFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAG 158 (257)
T ss_pred HHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhc-CeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCC
Confidence 9999864 345689999999999999999999998 99999999999999999999999999987543321 11
Q ss_pred cCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHH
Q 011519 213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291 (484)
Q Consensus 213 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 291 (484)
.+++.|+|||++.+..++.++||||||+++|++++ |..|+.......... ..........+...++++.+++.+
T Consensus 159 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~li~~ 233 (257)
T cd05115 159 KWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMS-----FIEQGKRLDCPAECPPEMYALMKD 233 (257)
T ss_pred CCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHH-----HHHCCCCCCCCCCCCHHHHHHHHH
Confidence 22468999999988889999999999999999996 887775432211111 111111123445567899999999
Q ss_pred HhccCCCCCCChHHHHHHHHhh
Q 011519 292 CLQYEPRERPNPRSLVTALVTL 313 (484)
Q Consensus 292 cl~~dp~~Rps~~~il~~l~~~ 313 (484)
||..||++||++.+|.+.|+.+
T Consensus 234 c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 234 CWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred HcCCChhhCcCHHHHHHHHhhh
Confidence 9999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-41 Score=317.74 Aligned_cols=248 Identities=22% Similarity=0.338 Sum_probs=199.1
Q ss_pred cccccCCCCCCceEEEEEeC-C---CcEEEEEEecCCCCc--cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCc------
Q 011519 60 NIVSEHGEKAPNVVYKGKLE-N---QFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDE------ 127 (484)
Q Consensus 60 ~~~~~lG~G~~g~Vy~~~~~-~---~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~------ 127 (484)
.+.+.||+|+||.||+|... + +..||||.++..... ....+.+|+..++.++||||+++++++.....
T Consensus 2 ~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 81 (273)
T cd05035 2 KLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPK 81 (273)
T ss_pred ccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCcc
Confidence 56678899999999999843 2 367999999754322 34578999999999999999999998866554
Q ss_pred eEEEEecCCCCCHHhhhccC----CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCc
Q 011519 128 RLLVAEYMPNDTLAKHLFHW----ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLM 203 (484)
Q Consensus 128 ~~lv~Ey~~~gsL~~~l~~~----~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a 203 (484)
.++||||+++|+|..++... ....+++..+..++.|++.||.|||+. +++||||||+||++++++.+||+|||++
T Consensus 82 ~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~-~i~H~dlkp~Nil~~~~~~~kl~dfg~~ 160 (273)
T cd05035 82 PMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR-NFIHRDLAARNCMLREDMTVCVADFGLS 160 (273)
T ss_pred cEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC-CeeccccchheEEECCCCeEEECCccce
Confidence 79999999999999998532 224689999999999999999999998 9999999999999999999999999998
Q ss_pred cccCCCC------cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCC
Q 011519 204 KNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQ 276 (484)
Q Consensus 204 ~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (484)
+...... ....+..|+|||.+.+..++.++|||||||++|||++ |..|+.............. . ....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~----~-~~~~ 235 (273)
T cd05035 161 KKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRH----G-NRLK 235 (273)
T ss_pred eeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc----C-CCCC
Confidence 8654332 1234568999999988889999999999999999999 7766654322221111111 0 1112
Q ss_pred CChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhh
Q 011519 277 FSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL 313 (484)
Q Consensus 277 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~ 313 (484)
.+...+..+.+++.+||+.||++|||+.+++++|..+
T Consensus 236 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 236 QPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred CCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 3445678899999999999999999999999999765
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-41 Score=330.85 Aligned_cols=251 Identities=18% Similarity=0.132 Sum_probs=198.3
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCC---CccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEe
Q 011519 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 133 (484)
+|++++.||+|+||+||++. ..+++.||||++.... ....+.+.+|+.++..++||||+++++++.+.+..++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (331)
T cd05597 2 DFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMD 81 (331)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEe
Confidence 57888999999999999999 4568999999996422 1234568899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCC---
Q 011519 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR--- 210 (484)
Q Consensus 134 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~--- 210 (484)
|++||+|.+++.. ....+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||++.......
T Consensus 82 ~~~g~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 159 (331)
T cd05597 82 YYVGGDLLTLLSK-FEDRLPEDMARFYLAEMVLAIDSVHQL-GYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQ 159 (331)
T ss_pred cCCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhC-CeEECCCCHHHEEECCCCCEEEEECCceeecCCCCCcc
Confidence 9999999999964 245689999999999999999999999 99999999999999999999999999987654322
Q ss_pred --cccCCCCCCCcccccC-----CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHH
Q 011519 211 --SYSTNLAFTPPEYLRT-----GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283 (484)
Q Consensus 211 --~~~~t~~y~aPE~~~~-----~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (484)
...||+.|+|||++.. ..++.++|||||||++|+|++|+.||................ ............+.
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~ 238 (331)
T cd05597 160 SNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHK-EHFQFPPDVTDVSE 238 (331)
T ss_pred ccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCC-CcccCCCccCCCCH
Confidence 2458999999999873 457889999999999999999999986543222111111100 00000011123567
Q ss_pred HHHHHHHHHhccCCC--CCCChHHHHHHHH
Q 011519 284 ELVRLASRCLQYEPR--ERPNPRSLVTALV 311 (484)
Q Consensus 284 ~l~~li~~cl~~dp~--~Rps~~~il~~l~ 311 (484)
.+.+++.+||..+++ .||++.++++|-+
T Consensus 239 ~~~~li~~ll~~~~~r~~r~~~~~~l~hp~ 268 (331)
T cd05597 239 EAKDLIRRLICSPETRLGRNGLQDFKDHPF 268 (331)
T ss_pred HHHHHHHHHccCcccccCCCCHHHHhcCCC
Confidence 899999998865444 3789999999943
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-41 Score=321.66 Aligned_cols=253 Identities=18% Similarity=0.314 Sum_probs=200.0
Q ss_pred ccccccCCCCCCceEEEEEe-----CCCcEEEEEEecCCCC-ccHHHHHHHHHHHhcCCCCceeeeeeeeeeC--CceEE
Q 011519 59 ENIVSEHGEKAPNVVYKGKL-----ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEG--DERLL 130 (484)
Q Consensus 59 ~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~--~~~~l 130 (484)
|.+++.||+|+||.||++.. .++..||+|.++.... .....+.+|+.+++.++||||+++++++... ...++
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (284)
T cd05079 6 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKL 85 (284)
T ss_pred hhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEE
Confidence 56788899999999999973 3578899999875432 2356799999999999999999999998775 56899
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCC
Q 011519 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR 210 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 210 (484)
||||++|++|.+++.. ....+++..+..++.||+.||.|||+. |++||||||+||+++.++.++|+|||++.......
T Consensus 86 v~e~~~g~~L~~~l~~-~~~~~~~~~~~~i~~~i~~aL~~lH~~-gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~ 163 (284)
T cd05079 86 IMEFLPSGSLKEYLPR-NKNKINLKQQLKYAVQICKGMDYLGSR-QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDK 163 (284)
T ss_pred EEEccCCCCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecccchheEEEcCCCCEEECCCccccccccCc
Confidence 9999999999999964 234689999999999999999999999 99999999999999999999999999988654321
Q ss_pred -------cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhh-------hcccc---ccccccc
Q 011519 211 -------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIR-------DRNIQ---TLTDSCL 273 (484)
Q Consensus 211 -------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~-------~~~~~---~~~~~~~ 273 (484)
...++..|+|||++.+..++.++||||||+++|+|+|+..|.......... ..... .......
T Consensus 164 ~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (284)
T cd05079 164 EYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGK 243 (284)
T ss_pred cceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcCc
Confidence 234566799999998888999999999999999999987654221110000 00000 0000001
Q ss_pred cCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhh
Q 011519 274 EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL 313 (484)
Q Consensus 274 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~ 313 (484)
....+..++..+.+|+.+||+.+|++|||+.++++.|+.+
T Consensus 244 ~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 244 RLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred cCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 1122344678899999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-41 Score=320.06 Aligned_cols=252 Identities=20% Similarity=0.275 Sum_probs=201.9
Q ss_pred cccccccCCCCCCceEEEEE-eCCCc----EEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEE
Q 011519 58 MENIVSEHGEKAPNVVYKGK-LENQF----RIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~-~~~~~----~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 131 (484)
++++++.||.|+||+||+|+ ..++. .||||.++..... ..+.+.+|+.++..++||||+++++++.. ...+++
T Consensus 8 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~l~ 86 (279)
T cd05109 8 ELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQLV 86 (279)
T ss_pred heeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcEEE
Confidence 56777888999999999998 44554 4899998754433 35578899999999999999999999875 457899
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCC-
Q 011519 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR- 210 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~- 210 (484)
+||+++|+|.+++... ...+++..++.++.||+.||.|||+. +++||||||+|||+++++.+||+|||+++......
T Consensus 87 ~~~~~~g~l~~~l~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~-~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~ 164 (279)
T cd05109 87 TQLMPYGCLLDYVREN-KDRIGSQDLLNWCVQIAKGMSYLEEV-RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDET 164 (279)
T ss_pred EEcCCCCCHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccccccceEEEcCCCcEEECCCCceeecccccc
Confidence 9999999999999642 34689999999999999999999999 99999999999999999999999999988654322
Q ss_pred -----cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHH
Q 011519 211 -----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTE 284 (484)
Q Consensus 211 -----~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (484)
...+++.|+|||.+.+..++.++|||||||++|||++ |..|+.......... ..........+...+..
T Consensus 165 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 239 (279)
T cd05109 165 EYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPD-----LLEKGERLPQPPICTID 239 (279)
T ss_pred eeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH-----HHHCCCcCCCCccCCHH
Confidence 1233567999999988889999999999999999998 777664332211111 11111111223445678
Q ss_pred HHHHHHHHhccCCCCCCChHHHHHHHHhhhcCC
Q 011519 285 LVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (484)
Q Consensus 285 l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 317 (484)
+.+++.+||..||+.||++.++++.|..+...+
T Consensus 240 ~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05109 240 VYMIMVKCWMIDSECRPRFRELVDEFSRMARDP 272 (279)
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence 999999999999999999999999998876654
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-41 Score=325.73 Aligned_cols=254 Identities=21% Similarity=0.296 Sum_probs=205.2
Q ss_pred CcccccccCCCCCCceEEEEEeC--------CCcEEEEEEecCCCC-ccHHHHHHHHHHHhcC-CCCceeeeeeeeeeCC
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLE--------NQFRIAVKRFNRSAW-PDARQFLEEARAVGQL-RNRRLANLLGCCCEGD 126 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~ 126 (484)
++|.+.+.||+|+||.||++... +...||+|.++.... .....+..|+.++..+ +||||+++++++...+
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 97 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 97 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence 46788899999999999999742 235699999975432 2345688999999999 7999999999999999
Q ss_pred ceEEEEecCCCCCHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCC
Q 011519 127 ERLLVAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 192 (484)
Q Consensus 127 ~~~lv~Ey~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~ 192 (484)
..++||||+++|+|.+++.... ...+++.+++.++.|++.||.|||+. |++||||||+||+++.+
T Consensus 98 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~-gi~H~dlkp~Nill~~~ 176 (307)
T cd05098 98 PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK-KCIHRDLAARNVLVTED 176 (307)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC-CcccccccHHheEEcCC
Confidence 9999999999999999996432 13488999999999999999999998 99999999999999999
Q ss_pred CCceeeccCCccccCCC------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccc
Q 011519 193 VNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNI 265 (484)
Q Consensus 193 ~~~kl~DfG~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~ 265 (484)
+.+||+|||++...... ....+++.|+|||++.+..++.++|||||||++|+|++ |..|+.............
T Consensus 177 ~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~~~~~ 256 (307)
T cd05098 177 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 256 (307)
T ss_pred CcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHH
Confidence 99999999998765432 11223468999999998889999999999999999998 776665433222211111
Q ss_pred cccccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhcC
Q 011519 266 QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316 (484)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 316 (484)
.......+...+.++.+|+.+||..+|.+|||+.++++.|+.+...
T Consensus 257 -----~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~ 302 (307)
T cd05098 257 -----EGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL 302 (307)
T ss_pred -----cCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence 1111123445678899999999999999999999999999987654
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-41 Score=320.56 Aligned_cols=248 Identities=20% Similarity=0.304 Sum_probs=200.1
Q ss_pred cccccccCCCCCCceEEEEEeC------CCcEEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEE
Q 011519 58 MENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 130 (484)
.+.+++.||+|+||.||+|... .+..||+|.+...... ....|.+|+.+++.++|+||+++++++.+.+..++
T Consensus 7 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 86 (277)
T cd05036 7 SITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRFI 86 (277)
T ss_pred HcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCcEE
Confidence 4567778899999999999953 4678999988754332 24569999999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCC-----CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCC---CceeeccCC
Q 011519 131 VAEYMPNDTLAKHLFHWET-----QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV---NPRLSCFGL 202 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~---~~kl~DfG~ 202 (484)
||||+++++|.+++..... ..+++..+..++.||+.||.|||+. +++|+||||+||+++.++ .+||+|||+
T Consensus 87 v~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivH~dlkp~nil~~~~~~~~~~kl~dfg~ 165 (277)
T cd05036 87 LLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN-HFIHRDIAARNCLLTCKGPGRVAKIADFGM 165 (277)
T ss_pred EEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CEeecccchheEEEeccCCCcceEeccCcc
Confidence 9999999999999964321 2589999999999999999999999 999999999999998654 599999999
Q ss_pred ccccCCCC------cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccC
Q 011519 203 MKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEG 275 (484)
Q Consensus 203 a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 275 (484)
++...... ....+..|+|||++.+..++.++|||||||++|||++ |..||........... .......
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~-----~~~~~~~ 240 (277)
T cd05036 166 ARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEF-----VTGGGRL 240 (277)
T ss_pred ccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH-----HHcCCcC
Confidence 88653221 1223467999999998889999999999999999997 8877765432222111 1111112
Q ss_pred CCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 276 QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 276 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
..+...+..+.+++.+||+.+|++|||+.+++++|.
T Consensus 241 ~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 241 DPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 334556788999999999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-41 Score=329.30 Aligned_cols=250 Identities=15% Similarity=0.166 Sum_probs=195.3
Q ss_pred ccccCCCC--CCceEEEEE-eCCCcEEEEEEecCCCCc--cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecC
Q 011519 61 IVSEHGEK--APNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 61 ~~~~lG~G--~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~ 135 (484)
+++.||+| +||+||++. ..+|+.||||.+...... ..+.+.+|+.+++.++||||+++++++..++..++||||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 45677988 788999999 567999999999764322 2345778999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC-------
Q 011519 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD------- 208 (484)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~------- 208 (484)
++|+|.+++.......+++..++.++.|++.||.|||+. +++||||||+|||++.++.++++|||.......
T Consensus 82 ~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~ 160 (327)
T cd08227 82 AYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHM-GYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRV 160 (327)
T ss_pred CCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCCChhhEEEecCCcEEEcccchhhccccccccccc
Confidence 999999999654455689999999999999999999998 999999999999999999999999986443211
Q ss_pred ----CCcccCCCCCCCcccccC--CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhh----hccccccccc-------
Q 011519 209 ----GRSYSTNLAFTPPEYLRT--GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIR----DRNIQTLTDS------- 271 (484)
Q Consensus 209 ----~~~~~~t~~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~----~~~~~~~~~~------- 271 (484)
.....++..|+|||++.+ ..++.++|||||||++|||++|+.||......... ........+.
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (327)
T cd08227 161 VHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEE 240 (327)
T ss_pred cccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhhh
Confidence 112345678999999976 35889999999999999999999988642111100 0000000000
Q ss_pred -----------------------------cccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 272 -----------------------------CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 272 -----------------------------~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
..........++.+.+|+.+||+.||++|||+.+++++.+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~ 309 (327)
T cd08227 241 LTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSF 309 (327)
T ss_pred cccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChh
Confidence 0000112234678999999999999999999999998743
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-41 Score=316.09 Aligned_cols=249 Identities=24% Similarity=0.376 Sum_probs=206.4
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCC
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~ 136 (484)
.++.+.+.||.|+||.||+|...++..||||.+..... ..+++.+|+.++++++||||+++++++......++||||++
T Consensus 6 ~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~ 84 (261)
T cd05034 6 ESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTM-SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMS 84 (261)
T ss_pred hheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCcc-CHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEeccC
Confidence 35677888999999999999987778899999975442 35679999999999999999999999998889999999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCC-----c
Q 011519 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-----S 211 (484)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~-----~ 211 (484)
+++|.+++....+..+++..+..++.|++.||.|||+. +++|+||||+||++++++.++|+|||++....... .
T Consensus 85 ~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~-~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~ 163 (261)
T cd05034 85 KGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESR-NYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREG 163 (261)
T ss_pred CCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCcchheEEEcCCCCEEECccccceeccchhhhhhhc
Confidence 99999999765556799999999999999999999999 99999999999999999999999999987654321 2
Q ss_pred ccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHH
Q 011519 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (484)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (484)
...+..|+|||.+.+..++.++||||||+++++|+| |+.||............... .....+...+.++.+++.
T Consensus 164 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~ 238 (261)
T cd05034 164 AKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERG-----YRMPRPPNCPEELYDLML 238 (261)
T ss_pred cCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-----CCCCCCCCCCHHHHHHHH
Confidence 233568999999998889999999999999999999 88777543222111111111 111223344678999999
Q ss_pred HHhccCCCCCCChHHHHHHHHh
Q 011519 291 RCLQYEPRERPNPRSLVTALVT 312 (484)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~l~~ 312 (484)
+||..+|++||++.++++.|+.
T Consensus 239 ~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 239 QCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred HHcccCcccCCCHHHHHHHHhc
Confidence 9999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-41 Score=332.98 Aligned_cols=250 Identities=15% Similarity=0.186 Sum_probs=196.7
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCC--CccHHHHHHHHHHHhcCCCCceeeeeeeeeeCC------
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGD------ 126 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~------ 126 (484)
..+|.+++.||+|+||.||++.. .+|..||||++.... ......+.+|+.+++.++||||+++++++....
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 99 (359)
T cd07876 20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQ 99 (359)
T ss_pred hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccc
Confidence 45788889999999999999994 568999999997542 223557889999999999999999999986543
Q ss_pred ceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCcccc
Q 011519 127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 206 (484)
Q Consensus 127 ~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~ 206 (484)
..++||||+++ +|.+.+. ..+++..+..++.||+.||.|||+. ||+||||||+|||++.++.+||+|||+++..
T Consensus 100 ~~~lv~e~~~~-~l~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~-~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~ 173 (359)
T cd07876 100 DVYLVMELMDA-NLCQVIH----MELDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTA 173 (359)
T ss_pred eeEEEEeCCCc-CHHHHHh----ccCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEECCCCCEEEecCCCcccc
Confidence 47999999965 6777663 2488999999999999999999999 9999999999999999999999999998764
Q ss_pred CCC---CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhc------------------cc
Q 011519 207 RDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR------------------NI 265 (484)
Q Consensus 207 ~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~------------------~~ 265 (484)
... ....+|+.|+|||++.+..++.++|||||||++|+|+||+.||........... ..
T Consensus 174 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (359)
T cd07876 174 CTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTV 253 (359)
T ss_pred ccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence 332 345678999999999988899999999999999999999998864311000000 00
Q ss_pred ccccc--cccc----------------CCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 266 QTLTD--SCLE----------------GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 266 ~~~~~--~~~~----------------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
..... +... .......+..+.+|+.+||..||++|||+.++++|-+
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~ 317 (359)
T cd07876 254 RNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPY 317 (359)
T ss_pred HHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCch
Confidence 00000 0000 0011123567899999999999999999999999854
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-41 Score=316.97 Aligned_cols=254 Identities=19% Similarity=0.246 Sum_probs=207.2
Q ss_pred CcccccccCCCCCCceEEEEEeC-CCcEEEEEEecCCCC---ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 132 (484)
..|.+.+.||.|+||.||+|... +|+.||+|.++.... ...+.+.+|++++++++|+||+++++++...+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 35677788899999999999954 889999998864322 22567899999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-
Q 011519 133 EYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 209 (484)
Q Consensus 133 Ey~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~- 209 (484)
||+++|+|.+++.+. ....+++.+++.++.|++.||.|||+. |++|+||||+||+++.++.++|+|||++......
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~-~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~ 160 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK-RIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT 160 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC-CEecCCcChhhEEECCCCcEEEeccceeeeccCCC
Confidence 999999999998642 345689999999999999999999998 9999999999999999999999999998765432
Q ss_pred ---CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCCh-HHHHHH
Q 011519 210 ---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSS-DEGTEL 285 (484)
Q Consensus 210 ---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l 285 (484)
....+++.|+|||.+.+..++.++||||||+++|+|++|+.|+.......... ...+.. ......+. ..+..+
T Consensus 161 ~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~ 237 (267)
T cd08224 161 TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSL--CKKIEK-CDYPPLPADHYSEEL 237 (267)
T ss_pred cccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHH--Hhhhhc-CCCCCCChhhcCHHH
Confidence 23467889999999988889999999999999999999998875432211100 000000 01111222 456789
Q ss_pred HHHHHHHhccCCCCCCChHHHHHHHHhhh
Q 011519 286 VRLASRCLQYEPRERPNPRSLVTALVTLQ 314 (484)
Q Consensus 286 ~~li~~cl~~dp~~Rps~~~il~~l~~~~ 314 (484)
.+++.+||..+|++|||+.+|++.|+.+.
T Consensus 238 ~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 238 RDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred HHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 99999999999999999999999998764
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-41 Score=337.89 Aligned_cols=249 Identities=18% Similarity=0.209 Sum_probs=197.3
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCC--CccHHHHHHHHHHHhcCCCCceeeeeeeeeeCC-----ceEE
Q 011519 59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGD-----ERLL 130 (484)
Q Consensus 59 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~-----~~~l 130 (484)
+++++.||+|+||+||++.. .+++.||||++.... ....+++.+|+.+++.++||||+++++++...+ ..++
T Consensus 2 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~l 81 (372)
T cd07853 2 VEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYV 81 (372)
T ss_pred CcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEE
Confidence 46778889999999999994 678999999986532 223567899999999999999999999998776 7899
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-
Q 011519 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 209 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~- 209 (484)
||||+. ++|.+++. ....+++..+..++.||+.||.|||+. |++||||||+|||++.++.+||+|||+++.....
T Consensus 82 v~e~~~-~~l~~~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~-~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~ 157 (372)
T cd07853 82 VTELMQ-SDLHKIIV--SPQPLSSDHVKVFLYQILRGLKYLHSA-GILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDE 157 (372)
T ss_pred Eeeccc-cCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCChHHEEECCCCCEEeccccceeecccCc
Confidence 999996 58888885 445799999999999999999999999 9999999999999999999999999998764332
Q ss_pred ----CcccCCCCCCCcccccCC-CCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcc--------c-----------
Q 011519 210 ----RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN--------I----------- 265 (484)
Q Consensus 210 ----~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~--------~----------- 265 (484)
....+|+.|+|||++.+. .++.++|||||||++|||++|+.||............ .
T Consensus 158 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 237 (372)
T cd07853 158 SKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGAR 237 (372)
T ss_pred cccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHH
Confidence 234568899999999874 4789999999999999999999888643211100000 0
Q ss_pred ccccccccc-------CCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 266 QTLTDSCLE-------GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 266 ~~~~~~~~~-------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
..+...... .......++++.+|+.+||+.||.+|||+.+++.|-+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~ 290 (372)
T cd07853 238 AHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPY 290 (372)
T ss_pred HHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHh
Confidence 000000000 0122334678999999999999999999999999854
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-41 Score=328.06 Aligned_cols=253 Identities=17% Similarity=0.261 Sum_probs=200.5
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEe
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 133 (484)
...|.+++.||+|+||+||+|+. .+++.||||.++..... ....+.+|+.++++++||||+++++++...+..++|||
T Consensus 5 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 84 (309)
T cd07872 5 METYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFE 84 (309)
T ss_pred CCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEe
Confidence 35688899999999999999994 46889999998754322 24467899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----
Q 011519 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 209 (484)
Q Consensus 134 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~---- 209 (484)
|+++ +|.+++.. .+..+++..+..++.||+.||.|||+. ||+||||||+|||++.++.+||+|||++......
T Consensus 85 ~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~lH~~-~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 161 (309)
T cd07872 85 YLDK-DLKQYMDD-CGNIMSMHNVKIFLYQILRGLAYCHRR-KVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTY 161 (309)
T ss_pred CCCC-CHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEECCCCCEEECccccceecCCCcccc
Confidence 9975 89888854 334589999999999999999999998 9999999999999999999999999998764322
Q ss_pred CcccCCCCCCCcccccC-CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcccc-----------cc------ccc
Q 011519 210 RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ-----------TL------TDS 271 (484)
Q Consensus 210 ~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~-----------~~------~~~ 271 (484)
....+|+.|+|||++.+ ..++.++|||||||++|+|+||+.||.............. .+ ...
T Consensus 162 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (309)
T cd07872 162 SNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNY 241 (309)
T ss_pred ccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhh
Confidence 23456889999999875 4588999999999999999999988865422111000000 00 000
Q ss_pred cccC-------CCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 272 CLEG-------QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 272 ~~~~-------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
.... ......+.++.+|+.+||..||.+|||+.+++.|-+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~ 288 (309)
T cd07872 242 NFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAY 288 (309)
T ss_pred hcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChh
Confidence 0000 011235678899999999999999999999998744
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-41 Score=322.75 Aligned_cols=256 Identities=20% Similarity=0.278 Sum_probs=207.2
Q ss_pred CCcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCC-ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEe
Q 011519 56 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 133 (484)
.++|++++.||+|+||+||++. ..+++.||+|++..... ...+.+.+|+++++.++||||+++++++...+..++|||
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCME 83 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEe
Confidence 3567888999999999999999 45788999999865432 235678999999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC--CCc
Q 011519 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD--GRS 211 (484)
Q Consensus 134 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~--~~~ 211 (484)
|+++++|.+++. ..+.+++..+..++.|++.||.|||+..+++|+||||+||++++++.++|+|||++..... ...
T Consensus 84 ~~~~~~L~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~~~ 161 (284)
T cd06620 84 FMDCGSLDRIYK--KGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIADT 161 (284)
T ss_pred cCCCCCHHHHHH--hccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhhccCc
Confidence 999999999986 3457899999999999999999999754899999999999999999999999999865432 234
Q ss_pred ccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhh-------hccccccccccccCCCC-hHHHH
Q 011519 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIR-------DRNIQTLTDSCLEGQFS-SDEGT 283 (484)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~-------~~~~~~~~~~~~~~~~~-~~~~~ 283 (484)
..++..|+|||++.+..++.++|||||||++|+|+||..||......... ........... ...++ ...+.
T Consensus 162 ~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 240 (284)
T cd06620 162 FVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEP-PPRLPSSDFPE 240 (284)
T ss_pred cccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhcc-CCCCCchhcCH
Confidence 56889999999998888999999999999999999999987643221000 00011111111 11122 22567
Q ss_pred HHHHHHHHHhccCCCCCCChHHHHHHHHhhh
Q 011519 284 ELVRLASRCLQYEPRERPNPRSLVTALVTLQ 314 (484)
Q Consensus 284 ~l~~li~~cl~~dp~~Rps~~~il~~l~~~~ 314 (484)
.+.+|+.+||+.||++|||+.+++++..-++
T Consensus 241 ~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~ 271 (284)
T cd06620 241 DLRDFVDACLLKDPTERPTPQQLCAMPPFIQ 271 (284)
T ss_pred HHHHHHHHHhcCCcccCcCHHHHhcCccccc
Confidence 8999999999999999999999999865544
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=313.30 Aligned_cols=241 Identities=25% Similarity=0.399 Sum_probs=199.0
Q ss_pred cCCCCCCceEEEEEeCCCcEEEEEEecCCCCcc-HHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCCCCCHHh
Q 011519 64 EHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD-ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAK 142 (484)
Q Consensus 64 ~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~~gsL~~ 142 (484)
.||.|+||.||+|...++..||+|.++...... ...+.+|+.+++.++||||+++++++...+..++||||+++++|.+
T Consensus 2 ~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 81 (250)
T cd05085 2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLS 81 (250)
T ss_pred ccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHHH
Confidence 469999999999998788899999987654332 3468899999999999999999999999999999999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCC-----cccCCCC
Q 011519 143 HLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-----SYSTNLA 217 (484)
Q Consensus 143 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~-----~~~~t~~ 217 (484)
++.. ....+++..+..++.|++.||.|||+. |++|+||||+||+++.++.+||+|||++....... ...+++.
T Consensus 82 ~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~-~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~ 159 (250)
T cd05085 82 FLRK-KKDELKTKQLVKFALDAAAGMAYLESK-NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPIK 159 (250)
T ss_pred HHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCCccc
Confidence 9864 234689999999999999999999998 99999999999999999999999999987543321 2233567
Q ss_pred CCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHHhccC
Q 011519 218 FTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYE 296 (484)
Q Consensus 218 y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 296 (484)
|+|||++.+..++.++||||||+++|++++ |..||.............. ......+...+..+.+++.+||..+
T Consensus 160 y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~li~~~l~~~ 234 (250)
T cd05085 160 WTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEK-----GYRMSCPQKCPDDVYKVMQRCWDYK 234 (250)
T ss_pred ccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHc-----CCCCCCCCCCCHHHHHHHHHHcccC
Confidence 999999998889999999999999999998 8877764432222111111 1112234456788999999999999
Q ss_pred CCCCCChHHHHHHHH
Q 011519 297 PRERPNPRSLVTALV 311 (484)
Q Consensus 297 p~~Rps~~~il~~l~ 311 (484)
|++|||+.++++.|.
T Consensus 235 p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 235 PENRPKFSELQKELA 249 (250)
T ss_pred cccCCCHHHHHHHhc
Confidence 999999999998874
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=316.76 Aligned_cols=247 Identities=21% Similarity=0.252 Sum_probs=191.1
Q ss_pred ccCCCCCCceEEEEEeC---CCcEEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCCCC
Q 011519 63 SEHGEKAPNVVYKGKLE---NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 138 (484)
Q Consensus 63 ~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~~g 138 (484)
+.||+|+||.||+|... ++..+|+|.++..... ....+.+|+.+++.++||||+++++++.+....++||||+++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 35799999999999843 3467999998765432 3457889999999999999999999999989999999999999
Q ss_pred CHHhhhccCC---CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC------
Q 011519 139 TLAKHLFHWE---TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG------ 209 (484)
Q Consensus 139 sL~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~------ 209 (484)
+|.+++.... ....++..+..++.|++.||.|||+. +++|+||||+||+++.++++||+|||++......
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~ 159 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN-NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTP 159 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC-CEeccccCcceEEEcCCCcEEECCccccccccCcceeecC
Confidence 9999996422 23467788889999999999999999 9999999999999999999999999998754322
Q ss_pred CcccCCCCCCCcccccCC-------CCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHH
Q 011519 210 RSYSTNLAFTPPEYLRTG-------RVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 281 (484)
Q Consensus 210 ~~~~~t~~y~aPE~~~~~-------~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (484)
....+++.|+|||++.+. .++.++||||||+++|||++ |..||.............................
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (269)
T cd05087 160 DQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPL 239 (269)
T ss_pred CCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCCC
Confidence 123456789999998642 35789999999999999996 8878754322211111111111111111222334
Q ss_pred HHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 282 GTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 282 ~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
+..+.+++..|| .+|++|||+.+|+..|.
T Consensus 240 ~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 240 SDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred ChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 677899999999 68999999999998763
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-41 Score=322.63 Aligned_cols=254 Identities=19% Similarity=0.274 Sum_probs=200.4
Q ss_pred CcccccccCCCCCCceEEEEEeCC-----------------CcEEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCceeee
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLEN-----------------QFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANL 118 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l 118 (484)
.+|++++.||+|+||.||+|.... +..||+|.+...... ..+.+.+|+.++++++||||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~ 84 (296)
T cd05051 5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARL 84 (296)
T ss_pred hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence 467889999999999999998432 246899998765433 35678999999999999999999
Q ss_pred eeeeeeCCceEEEEecCCCCCHHhhhccCC---------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceee
Q 011519 119 LGCCCEGDERLLVAEYMPNDTLAKHLFHWE---------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF 189 (484)
Q Consensus 119 ~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~---------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill 189 (484)
++++...+..++||||+++++|.+++.... ...+++..++.++.|++.||.|||+. |++|+||||+||++
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~-~i~H~dlkp~Nili 163 (296)
T cd05051 85 LGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL-NFVHRDLATRNCLV 163 (296)
T ss_pred EEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc-Cccccccchhceee
Confidence 999999999999999999999999996432 12689999999999999999999998 99999999999999
Q ss_pred cCCCCceeeccCCccccCCC------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh--CCCCCCchhhHHhh
Q 011519 190 DDDVNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS--GKHIPPSHALDLIR 261 (484)
Q Consensus 190 ~~~~~~kl~DfG~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t--g~~p~~~~~~~~~~ 261 (484)
+.++.++|+|||+++..... ....+++.|+|||++.+..++.++|||||||++|||++ |..|+.........
T Consensus 164 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~ 243 (296)
T cd05051 164 GKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVI 243 (296)
T ss_pred cCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHH
Confidence 99999999999998764332 23345678999999988889999999999999999998 44454322111111
Q ss_pred hcccccc--ccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 262 DRNIQTL--TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 262 ~~~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
....... .........+...+.++.+++.+||+.||.+|||+.+|++.|+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 244 ENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred HHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 1100000 0000111123345678999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-41 Score=314.85 Aligned_cols=246 Identities=18% Similarity=0.186 Sum_probs=205.4
Q ss_pred ccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCC--CccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecC
Q 011519 59 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 59 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~ 135 (484)
|++++.||.|+||.||.+. ..++..+++|.+.... ....+.+.+|+.++++++|+||+++++++.+.+..++||||+
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~ 81 (256)
T cd08221 2 YIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYA 81 (256)
T ss_pred ceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEec
Confidence 6677888999999999999 5678899999986543 233567899999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----Cc
Q 011519 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RS 211 (484)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~----~~ 211 (484)
++|+|.+++.......+++..+..++.|++.||.|||+. |++|+||+|+||+++.++.+||+|||++...... ..
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~-~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~~ 160 (256)
T cd08221 82 NGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKA-GILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAET 160 (256)
T ss_pred CCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC-CccccCCChHhEEEeCCCCEEECcCcceEEcccccccccc
Confidence 999999999754456789999999999999999999998 9999999999999999999999999998765443 24
Q ss_pred ccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHH
Q 011519 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291 (484)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 291 (484)
..+++.|+|||.+.+..++.++||||||+++++|++|..||................. ...+...+.++.+++.+
T Consensus 161 ~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~~ 235 (256)
T cd08221 161 VVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNY-----TPVVSVYSSELISLVHS 235 (256)
T ss_pred cCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCC-----CCCccccCHHHHHHHHH
Confidence 5678999999999888889999999999999999999988765332221111111101 11224456789999999
Q ss_pred HhccCCCCCCChHHHHHHH
Q 011519 292 CLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 292 cl~~dp~~Rps~~~il~~l 310 (484)
||..+|.+|||+.++++++
T Consensus 236 ~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 236 LLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred HcccCcccCCCHHHHhhCc
Confidence 9999999999999999874
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-41 Score=331.54 Aligned_cols=253 Identities=21% Similarity=0.288 Sum_probs=199.8
Q ss_pred cccccccCCCCCCceEEEEEe------CCCcEEEEEEecCCCCc-cHHHHHHHHHHHhcC-CCCceeeeeeeeeeC-Cce
Q 011519 58 MENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQL-RNRRLANLLGCCCEG-DER 128 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~-~~~ 128 (484)
+|++++.||.|+||+||+|+. .+++.||||+++..... ....+.+|+.++.++ +||||+++++++... ...
T Consensus 8 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~ 87 (343)
T cd05103 8 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPL 87 (343)
T ss_pred HhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCce
Confidence 678889999999999999973 34688999999764322 345688999999999 689999999988654 467
Q ss_pred EEEEecCCCCCHHhhhccCC------------------------------------------------------------
Q 011519 129 LLVAEYMPNDTLAKHLFHWE------------------------------------------------------------ 148 (484)
Q Consensus 129 ~lv~Ey~~~gsL~~~l~~~~------------------------------------------------------------ 148 (484)
++||||+++|+|.+++....
T Consensus 88 ~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (343)
T cd05103 88 MVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAE 167 (343)
T ss_pred EEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhhh
Confidence 89999999999999986421
Q ss_pred -----CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC------CcccCCCC
Q 011519 149 -----TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG------RSYSTNLA 217 (484)
Q Consensus 149 -----~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~------~~~~~t~~ 217 (484)
...+++..+..++.||+.||.|||+. |++||||||+|||++.++.+||+|||++...... ....+++.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~ 246 (343)
T cd05103 168 QEDLYKKVLTLEDLICYSFQVAKGMEFLASR-KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLK 246 (343)
T ss_pred hhhhhhccCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCcc
Confidence 12468888999999999999999998 9999999999999999999999999998764322 12234567
Q ss_pred CCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHHhccC
Q 011519 218 FTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYE 296 (484)
Q Consensus 218 y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 296 (484)
|+|||.+.+..++.++||||||+++|+|++ |..|++........... .........+...++.+.+++..||+.|
T Consensus 247 y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~cl~~~ 322 (343)
T cd05103 247 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR----LKEGTRMRAPDYTTPEMYQTMLDCWHGE 322 (343)
T ss_pred eECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHH----HhccCCCCCCCCCCHHHHHHHHHHccCC
Confidence 999999988889999999999999999997 77776543211100000 0000111122334578999999999999
Q ss_pred CCCCCChHHHHHHHHhhhc
Q 011519 297 PRERPNPRSLVTALVTLQK 315 (484)
Q Consensus 297 p~~Rps~~~il~~l~~~~~ 315 (484)
|++|||+.+|+++|+.+.+
T Consensus 323 p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 323 PSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred hhhCcCHHHHHHHHHHHHh
Confidence 9999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-41 Score=320.90 Aligned_cols=247 Identities=18% Similarity=0.233 Sum_probs=199.3
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecC
Q 011519 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~ 135 (484)
++++++.||+|+||.||+|. ..+++.||||.+...... ..+.+.+|+.++.+++||||+++++++...+..++||||+
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 81 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFM 81 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecC
Confidence 45777889999999999999 467889999998654322 3456899999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC--Cccc
Q 011519 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYS 213 (484)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~--~~~~ 213 (484)
++++|..+. .+++..+..++.|++.||.|||+. |++|+||||+|||++.++.++|+|||++...... ....
T Consensus 82 ~~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~ 154 (279)
T cd06619 82 DGGSLDVYR------KIPEHVLGRIAVAVVKGLTYLWSL-KILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTYV 154 (279)
T ss_pred CCCChHHhh------cCCHHHHHHHHHHHHHHHHHHHHC-CEeeCCCCHHHEEECCCCCEEEeeCCcceecccccccCCC
Confidence 999997653 478889999999999999999998 9999999999999999999999999998765432 3457
Q ss_pred CCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhh---hccccccccccccCCCChHHHHHHHHHHH
Q 011519 214 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIR---DRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (484)
Q Consensus 214 ~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (484)
+|..|+|||++.+..++.++||||||+++|+|++|+.||......... ....................++++.+++.
T Consensus 155 ~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 234 (279)
T cd06619 155 GTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFIT 234 (279)
T ss_pred CChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHHHH
Confidence 889999999999888999999999999999999999887532110000 00000000000011112234578999999
Q ss_pred HHhccCCCCCCChHHHHHHHH
Q 011519 291 RCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~l~ 311 (484)
+||+.+|++||++++++++.+
T Consensus 235 ~~l~~~P~~Rp~~~eil~~~~ 255 (279)
T cd06619 235 QCMRKQPKERPAPENLMDHPF 255 (279)
T ss_pred HHhhCChhhCCCHHHHhcCcc
Confidence 999999999999999998844
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-41 Score=323.99 Aligned_cols=254 Identities=19% Similarity=0.298 Sum_probs=204.9
Q ss_pred CcccccccCCCCCCceEEEEEe--------CCCcEEEEEEecCCC-CccHHHHHHHHHHHhcC-CCCceeeeeeeeeeCC
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL--------ENQFRIAVKRFNRSA-WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGD 126 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~--------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~ 126 (484)
.++.+.+.||+|+||.||+|.. .++..||+|.+.... ....+.+.+|+.+++.+ +||||+++++++....
T Consensus 15 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 94 (304)
T cd05101 15 DKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 94 (304)
T ss_pred HHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecCC
Confidence 4567778899999999999973 124579999987543 23356789999999999 8999999999999999
Q ss_pred ceEEEEecCCCCCHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCC
Q 011519 127 ERLLVAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 192 (484)
Q Consensus 127 ~~~lv~Ey~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~ 192 (484)
..++||||+++|+|.+++.... ...+++.++..++.||+.||.|||+. |++||||||+||+++.+
T Consensus 95 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~-givH~dlkp~Nili~~~ 173 (304)
T cd05101 95 PLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ-KCIHRDLAARNVLVTEN 173 (304)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC-CeeecccccceEEEcCC
Confidence 9999999999999999996432 13578899999999999999999999 99999999999999999
Q ss_pred CCceeeccCCccccCCC------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccc
Q 011519 193 VNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNI 265 (484)
Q Consensus 193 ~~~kl~DfG~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~ 265 (484)
+.+||+|||+++..... ....+++.|+|||++.+..++.++||||||+++|+|++ |..|+.............
T Consensus 174 ~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~ 253 (304)
T cd05101 174 NVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 253 (304)
T ss_pred CcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHH
Confidence 99999999998865432 12334578999999988889999999999999999998 666665443322221111
Q ss_pred cccccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhcC
Q 011519 266 QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316 (484)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 316 (484)
. ......+..++..+.+|+.+||..+|++|||+.++++.|..+...
T Consensus 254 ~-----~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~ 299 (304)
T cd05101 254 E-----GHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL 299 (304)
T ss_pred c-----CCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence 1 111122345568899999999999999999999999999887653
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-40 Score=314.60 Aligned_cols=242 Identities=30% Similarity=0.431 Sum_probs=202.1
Q ss_pred cCCCCCCceEEEEEeC-C---CcEEEEEEecCCCCcc-HHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCCCC
Q 011519 64 EHGEKAPNVVYKGKLE-N---QFRIAVKRFNRSAWPD-ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 138 (484)
Q Consensus 64 ~lG~G~~g~Vy~~~~~-~---~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~~g 138 (484)
.||+|+||.||+|... . +..|+||.++...... .+.+.+|+.++..++|+||+++++++......++||||++++
T Consensus 2 ~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 81 (262)
T cd00192 2 KLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEGG 81 (262)
T ss_pred ccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccCC
Confidence 5799999999999953 3 7889999998665433 677999999999999999999999999999999999999999
Q ss_pred CHHhhhccCC-------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC--
Q 011519 139 TLAKHLFHWE-------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 209 (484)
Q Consensus 139 sL~~~l~~~~-------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~-- 209 (484)
+|.+++.... ...+++..++.++.|++.||.|||+. +++|+||||+||+++.++.++|+|||.+......
T Consensus 82 ~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~-~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~ 160 (262)
T cd00192 82 DLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK-KFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDY 160 (262)
T ss_pred cHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC-CcccCccCcceEEECCCCcEEEcccccccccccccc
Confidence 9999997531 36789999999999999999999998 9999999999999999999999999999876543
Q ss_pred ----CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHH
Q 011519 210 ----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTE 284 (484)
Q Consensus 210 ----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (484)
....+++.|+|||.+.+..++.++||||||+++|+|++ |..|+.............. ......+..++.+
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 235 (262)
T cd00192 161 YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRK-----GYRLPKPEYCPDE 235 (262)
T ss_pred cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc-----CCCCCCCccCChH
Confidence 23456788999999988889999999999999999999 5777654422221111111 1112234555789
Q ss_pred HHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 285 LVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 285 l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
+.+++.+||..+|.+|||+.+++++|+
T Consensus 236 ~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 236 LYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred HHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 999999999999999999999999873
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-41 Score=317.69 Aligned_cols=246 Identities=20% Similarity=0.278 Sum_probs=188.7
Q ss_pred ccCCCCCCceEEEEEeC---CCcEEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCCCC
Q 011519 63 SEHGEKAPNVVYKGKLE---NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 138 (484)
Q Consensus 63 ~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~~g 138 (484)
++||+|+||+||+|... ....+++|.+...... ....|.+|+.+++.++||||+++++.+.+.+..++||||+++|
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG 80 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence 35799999999999743 2457888887654322 2456889999999999999999999999999999999999999
Q ss_pred CHHhhhccCCC---CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC------
Q 011519 139 TLAKHLFHWET---QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG------ 209 (484)
Q Consensus 139 sL~~~l~~~~~---~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~------ 209 (484)
+|.+++..... ...++.....++.||+.||.|||+. +++||||||+|||+++++++||+|||++......
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~ 159 (269)
T cd05042 81 DLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA-DFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITK 159 (269)
T ss_pred cHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc-CEecccccHhheEecCCCcEEEeccccccccccchheecc
Confidence 99999964322 2356788899999999999999999 9999999999999999999999999998653221
Q ss_pred CcccCCCCCCCcccccC-------CCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHH
Q 011519 210 RSYSTNLAFTPPEYLRT-------GRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 281 (484)
Q Consensus 210 ~~~~~t~~y~aPE~~~~-------~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (484)
....+++.|+|||++.. ..++.++|||||||++|||++ |..|+.........................+...
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (269)
T cd05042 160 DCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKY 239 (269)
T ss_pred CCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcccccC
Confidence 22344677999998753 346889999999999999999 5555543321111111111111111122234456
Q ss_pred HHHHHHHHHHHhccCCCCCCChHHHHHHH
Q 011519 282 GTELVRLASRCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 282 ~~~l~~li~~cl~~dp~~Rps~~~il~~l 310 (484)
+..+.+++..|| .||++|||+.+|++.|
T Consensus 240 ~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l 267 (269)
T cd05042 240 SDRWYEVMQFCW-LDPETRPTAEEVHELL 267 (269)
T ss_pred CHHHHHHHHHHh-cCcccccCHHHHHHHh
Confidence 678889999999 5999999999999876
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-41 Score=340.15 Aligned_cols=244 Identities=18% Similarity=0.205 Sum_probs=193.1
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCC
Q 011519 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~ 136 (484)
.|.+.+.||.|+||.||++.. .+++.||||... ...+.+|+++|++++|||||++++++...+..++|||++.
T Consensus 170 gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~ 243 (461)
T PHA03211 170 GFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYR 243 (461)
T ss_pred CeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccC
Confidence 467788899999999999995 458899999643 2346789999999999999999999999999999999995
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC------C
Q 011519 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG------R 210 (484)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~------~ 210 (484)
++|.+++.. ....+++..++.|+.||+.||.|||+. |||||||||+|||++.++.+||+|||+++..... .
T Consensus 244 -~~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~yLH~~-gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~ 320 (461)
T PHA03211 244 -SDLYTYLGA-RLRPLGLAQVTAVARQLLSAIDYIHGE-GIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHY 320 (461)
T ss_pred -CCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CEEECcCCHHHEEECCCCCEEEcccCCceeccccccccccc
Confidence 689998864 334699999999999999999999999 9999999999999999999999999998765332 1
Q ss_pred cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCch------------hhHHhhhccc--cccccc-----
Q 011519 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH------------ALDLIRDRNI--QTLTDS----- 271 (484)
Q Consensus 211 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~------------~~~~~~~~~~--~~~~~~----- 271 (484)
...||+.|+|||++.+..++.++|||||||++|||++|..++... ....+..... ......
T Consensus 321 ~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l 400 (461)
T PHA03211 321 GIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRL 400 (461)
T ss_pred ccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHH
Confidence 346899999999999888999999999999999999987654321 1111111000 000000
Q ss_pred ----------ccc-----CCCC--hHHHHHHHHHHHHHhccCCCCCCChHHHHHHH
Q 011519 272 ----------CLE-----GQFS--SDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 272 ----------~~~-----~~~~--~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 310 (484)
... ..+. ...+..+.+||.+||+.||.+|||+.|+++|-
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp 456 (461)
T PHA03211 401 VSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLP 456 (461)
T ss_pred HHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCc
Confidence 000 0000 02345789999999999999999999999983
|
|
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-41 Score=319.01 Aligned_cols=249 Identities=23% Similarity=0.366 Sum_probs=202.1
Q ss_pred CcccccccCCCCCCceEEEEEeC------CCcEEEEEEecCCCC-ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 129 (484)
.++.+++.||+|+||.||+|... .+..||+|.+..... .....+.+|+.++..++||||+++++++......+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~ 85 (277)
T cd05032 6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTL 85 (277)
T ss_pred HHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcE
Confidence 35677888999999999999843 246899999875532 23456889999999999999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCC--------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccC
Q 011519 130 LVAEYMPNDTLAKHLFHWE--------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 201 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG 201 (484)
+||||+++|+|.+++.... ...+++..++.++.||+.||.|||+. +++|+||||+||+++.++.+||+|||
T Consensus 86 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~di~p~nill~~~~~~kl~dfg 164 (277)
T cd05032 86 VVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK-KFVHRDLAARNCMVAEDLTVKIGDFG 164 (277)
T ss_pred EEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC-CccccccChheEEEcCCCCEEECCcc
Confidence 9999999999999996422 23478899999999999999999998 99999999999999999999999999
Q ss_pred CccccCCC------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhcccccccccccc
Q 011519 202 LMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLE 274 (484)
Q Consensus 202 ~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 274 (484)
+++..... ....++..|+|||.+.+..++.++|||||||++|||+| |..|+............. ....
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~-----~~~~ 239 (277)
T cd05032 165 MTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVI-----DGGH 239 (277)
T ss_pred cchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHh-----cCCC
Confidence 98764332 23345678999999988889999999999999999998 777765432222111111 1111
Q ss_pred CCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 275 GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 275 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
...+...+..+.+++.+||..+|++|||+.++++.|+
T Consensus 240 ~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 240 LDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred CCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 1234445788999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=317.38 Aligned_cols=245 Identities=14% Similarity=0.196 Sum_probs=197.0
Q ss_pred ccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCccHHHHHHHHHHHhcC-CCCceeeeeeeeeeC------CceEE
Q 011519 59 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEG------DERLL 130 (484)
Q Consensus 59 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~------~~~~l 130 (484)
|++++.||.|+||.||+|. ..+++.||+|++.... .....+.+|+.++.++ +||||+++++++... ...++
T Consensus 8 y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~i 86 (272)
T cd06637 8 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWL 86 (272)
T ss_pred hhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEE
Confidence 4556778999999999999 4568899999987543 3345788999999998 699999999998753 45899
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC--
Q 011519 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-- 208 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~-- 208 (484)
||||+++|+|.+++.......+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++.....
T Consensus 87 v~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~-~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~~ 165 (272)
T cd06637 87 VMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH-KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTV 165 (272)
T ss_pred EEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCCHHHEEECCCCCEEEccCCCceeccccc
Confidence 99999999999999765556789999999999999999999999 999999999999999999999999999876432
Q ss_pred --CCcccCCCCCCCcccccC-----CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHH
Q 011519 209 --GRSYSTNLAFTPPEYLRT-----GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 281 (484)
Q Consensus 209 --~~~~~~t~~y~aPE~~~~-----~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (484)
.....|++.|+|||++.+ ..++.++|||||||++|+|++|..||............. ........+...
T Consensus 166 ~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~----~~~~~~~~~~~~ 241 (272)
T cd06637 166 GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIP----RNPAPRLKSKKW 241 (272)
T ss_pred ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHh----cCCCCCCCCCCc
Confidence 234567889999999862 357889999999999999999998875322111111000 011111122345
Q ss_pred HHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 282 GTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 282 ~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
+..+.+|+.+||..+|.+|||+.+++.+
T Consensus 242 ~~~~~~li~~~l~~~p~~Rpt~~~il~~ 269 (272)
T cd06637 242 SKKFQSFIESCLVKNHSQRPTTEQLMKH 269 (272)
T ss_pred CHHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence 6789999999999999999999999876
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-40 Score=314.73 Aligned_cols=242 Identities=22% Similarity=0.297 Sum_probs=197.8
Q ss_pred cCCCCCCceEEEEEeC--CC--cEEEEEEecCCCC-ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCCCC
Q 011519 64 EHGEKAPNVVYKGKLE--NQ--FRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 138 (484)
Q Consensus 64 ~lG~G~~g~Vy~~~~~--~~--~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~~g 138 (484)
.||+|++|+||+|.+. ++ ..||||.+..... ...+.+.+|+.++++++||||+++++.+.. ...++||||+++|
T Consensus 2 ~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~~ 80 (257)
T cd05040 2 KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPLG 80 (257)
T ss_pred cCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCCC
Confidence 5699999999999853 23 3699999987665 446689999999999999999999999988 8899999999999
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-------Cc
Q 011519 139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-------RS 211 (484)
Q Consensus 139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~-------~~ 211 (484)
+|.+++.+.....+++..++.++.|++.||.|||+. +++|+||||+||+++.++.+||+|||++...... ..
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~-~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 159 (257)
T cd05040 81 SLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESK-RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEH 159 (257)
T ss_pred cHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhC-CccccccCcccEEEecCCEEEeccccccccccccccceecccC
Confidence 999999754335689999999999999999999999 9999999999999999999999999998875432 12
Q ss_pred ccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHH
Q 011519 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (484)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (484)
..++..|+|||++.+..++.++|||||||++|+|++ |..|+.............. .......+...+..+.+++.
T Consensus 160 ~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~li~ 235 (257)
T cd05040 160 LKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDK----EGERLERPEACPQDIYNVML 235 (257)
T ss_pred CCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh----cCCcCCCCccCCHHHHHHHH
Confidence 345678999999998889999999999999999999 8887643221111111100 00111123345678999999
Q ss_pred HHhccCCCCCCChHHHHHHHH
Q 011519 291 RCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~l~ 311 (484)
+||+.+|++|||+.++++.|.
T Consensus 236 ~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 236 QCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred HHCCCCcccCCCHHHHHHHhc
Confidence 999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-41 Score=322.65 Aligned_cols=254 Identities=20% Similarity=0.272 Sum_probs=198.1
Q ss_pred CcccccccCCCCCCceEEEEEeCC---------------CcEEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCceeeeee
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLEN---------------QFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLG 120 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~~---------------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~ 120 (484)
.+|++.+.||+|+||.||+++... ...||||.++..... ....|.+|++++++++||||+++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 367888999999999999997432 235899999764322 2456999999999999999999999
Q ss_pred eeeeCCceEEEEecCCCCCHHhhhccCC----------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeec
Q 011519 121 CCCEGDERLLVAEYMPNDTLAKHLFHWE----------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD 190 (484)
Q Consensus 121 ~~~~~~~~~lv~Ey~~~gsL~~~l~~~~----------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~ 190 (484)
++...+..++||||+++++|.+++.... ...+++..++.++.|++.||.|||+. |++|+||||+||+++
T Consensus 85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~-~i~H~dlkp~Nill~ 163 (295)
T cd05097 85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL-NFVHRDLATRNCLVG 163 (295)
T ss_pred EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc-CeeccccChhhEEEc
Confidence 9999999999999999999999985321 12468899999999999999999998 999999999999999
Q ss_pred CCCCceeeccCCccccCCCC------cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhC--CCCCCchhhHHhhh
Q 011519 191 DDVNPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSG--KHIPPSHALDLIRD 262 (484)
Q Consensus 191 ~~~~~kl~DfG~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg--~~p~~~~~~~~~~~ 262 (484)
+++.+||+|||++....... ...+++.|+|||++.++.++.++|||||||++++|+++ ..|+..........
T Consensus 164 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~ 243 (295)
T cd05097 164 NHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIE 243 (295)
T ss_pred CCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHH
Confidence 99999999999987643321 22345689999999888899999999999999999984 44443322111111
Q ss_pred cccc--ccccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 263 RNIQ--TLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 263 ~~~~--~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
.... ...........+...++.+.+|+.+||+.||++|||+.+|++.|+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 244 NTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred HHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 1000 000000111123345678999999999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-41 Score=334.38 Aligned_cols=250 Identities=16% Similarity=0.206 Sum_probs=197.4
Q ss_pred CCcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCC--ccHHHHHHHHHHHhcCCCCceeeeeeeeeeC------C
Q 011519 56 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEG------D 126 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~------~ 126 (484)
+.+|.+++.||+|+||.||++. ...++.||||++..... .....+.+|+.+++.++||||+++++++... .
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 95 (355)
T cd07874 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQ 95 (355)
T ss_pred hhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccc
Confidence 4578888999999999999999 45688999999975432 2345788999999999999999999988643 3
Q ss_pred ceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCcccc
Q 011519 127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 206 (484)
Q Consensus 127 ~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~ 206 (484)
..++||||+++ +|.+.+. ..+++..+..++.|++.||.|||+. ||+||||||+|||++.++.+||+|||+++..
T Consensus 96 ~~~lv~e~~~~-~l~~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~-givHrDikp~Nill~~~~~~kl~Dfg~~~~~ 169 (355)
T cd07874 96 DVYLVMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTA 169 (355)
T ss_pred eeEEEhhhhcc-cHHHHHh----hcCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCChHHEEECCCCCEEEeeCcccccC
Confidence 47999999965 6777764 2488999999999999999999998 9999999999999999999999999999875
Q ss_pred CCC---CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccc------------------
Q 011519 207 RDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI------------------ 265 (484)
Q Consensus 207 ~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~------------------ 265 (484)
... ....+|+.|+|||++.+..++.++|||||||++|+|++|+.||.............
T Consensus 170 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (355)
T cd07874 170 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV 249 (355)
T ss_pred CCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHH
Confidence 443 34568899999999998889999999999999999999999886432110000000
Q ss_pred cccc----------------cccc--cCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 266 QTLT----------------DSCL--EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 266 ~~~~----------------~~~~--~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
.... +... ....+...+..+.+|+.+||..||++|||+.++++|-+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~ 313 (355)
T cd07874 250 RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPY 313 (355)
T ss_pred HHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcc
Confidence 0000 0000 00111223567899999999999999999999999843
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-41 Score=321.27 Aligned_cols=247 Identities=18% Similarity=0.259 Sum_probs=210.9
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCcc--HHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEec
Q 011519 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey 134 (484)
-|++-+.||+|-|.+|-+++ .=+|..||||++.+....+ ...+.+|+..|+.++|||||++|.+......+|||+|+
T Consensus 19 LYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLEL 98 (864)
T KOG4717|consen 19 LYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILEL 98 (864)
T ss_pred eehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEe
Confidence 35566778999999999999 4589999999998766544 34688999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeec-CCCCceeeccCCccccCCC---C
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD-DDVNPRLSCFGLMKNSRDG---R 210 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~-~~~~~kl~DfG~a~~~~~~---~ 210 (484)
-++|+|.+||.++.. .+.+..+.+++.||+.|+.|+|+. ++|||||||+||++- .-|-|||+|||++..+.++ .
T Consensus 99 GD~GDl~DyImKHe~-Gl~E~La~kYF~QI~~AI~YCHqL-HVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL~ 176 (864)
T KOG4717|consen 99 GDGGDLFDYIMKHEE-GLNEDLAKKYFAQIVHAISYCHQL-HVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKLT 176 (864)
T ss_pred cCCchHHHHHHhhhc-cccHHHHHHHHHHHHHHHHHHhhh-hhhcccCCcceeEEeeecCceEeeeccccccCCCcchhh
Confidence 999999999976554 489999999999999999999999 999999999999886 5688999999999887665 4
Q ss_pred cccCCCCCCCcccccCCCCC-CCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHH
Q 011519 211 SYSTNLAFTPPEYLRTGRVT-PESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289 (484)
Q Consensus 211 ~~~~t~~y~aPE~~~~~~~~-~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 289 (484)
+.+|+..|.|||.+.|..|+ ++.||||||||||-|++|+.||...... ....++-.+ ....|..++.++++||
T Consensus 177 TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDS-----ETLTmImDC-KYtvPshvS~eCrdLI 250 (864)
T KOG4717|consen 177 TSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDS-----ETLTMIMDC-KYTVPSHVSKECRDLI 250 (864)
T ss_pred cccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccch-----hhhhhhhcc-cccCchhhhHHHHHHH
Confidence 67899999999999998885 4889999999999999999887643211 112222222 2346888999999999
Q ss_pred HHHhccCCCCCCChHHHHHHHHh
Q 011519 290 SRCLQYEPRERPNPRSLVTALVT 312 (484)
Q Consensus 290 ~~cl~~dp~~Rps~~~il~~l~~ 312 (484)
..||..||.+|.|.++|..+-|-
T Consensus 251 ~sMLvRdPkkRAslEeI~s~~Wl 273 (864)
T KOG4717|consen 251 QSMLVRDPKKRASLEEIVSTSWL 273 (864)
T ss_pred HHHHhcCchhhccHHHHhccccc
Confidence 99999999999999999987543
|
|
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=317.23 Aligned_cols=247 Identities=23% Similarity=0.326 Sum_probs=195.2
Q ss_pred ccccCCCCCCceEEEEEeCC-Cc--EEEEEEecCCC--CccHHHHHHHHHHHhcCCCCceeeeeeeeeeC------CceE
Q 011519 61 IVSEHGEKAPNVVYKGKLEN-QF--RIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEG------DERL 129 (484)
Q Consensus 61 ~~~~lG~G~~g~Vy~~~~~~-~~--~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~------~~~~ 129 (484)
+.+.||+|+||.||+|+..+ +. .||||.++... ....+.+.+|+.+++.++||||+++++++... ...+
T Consensus 3 i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 82 (272)
T cd05075 3 LGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPV 82 (272)
T ss_pred cccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCcE
Confidence 45678999999999999543 33 69999987543 22356789999999999999999999987432 2468
Q ss_pred EEEecCCCCCHHhhhccC----CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccc
Q 011519 130 LVAEYMPNDTLAKHLFHW----ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN 205 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~~----~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 205 (484)
+||||+++|+|.+++... ....+++..+..++.||+.||.|||+. +++||||||+|||++.++.+||+|||+++.
T Consensus 83 ~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 161 (272)
T cd05075 83 VILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK-SFIHRDLAARNCMLNENMNVCVADFGLSKK 161 (272)
T ss_pred EEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC-CeeccccchhheEEcCCCCEEECCCCcccc
Confidence 999999999999987421 234589999999999999999999998 999999999999999999999999999887
Q ss_pred cCCC------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCC
Q 011519 206 SRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFS 278 (484)
Q Consensus 206 ~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (484)
.... ....+++.|++||.+.+..++.++||||||+++|+|++ |..||.............. ......+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~ 236 (272)
T cd05075 162 IYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQ-----GNRLKQP 236 (272)
T ss_pred cCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc-----CCCCCCC
Confidence 5432 12234678999999998889999999999999999999 6777654322111111100 0011223
Q ss_pred hHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhh
Q 011519 279 SDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL 313 (484)
Q Consensus 279 ~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~ 313 (484)
...+..+.+++.+||+.||++|||+.++++.|+.+
T Consensus 237 ~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 237 PDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 44567899999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-41 Score=320.65 Aligned_cols=251 Identities=16% Similarity=0.222 Sum_probs=205.1
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEec
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey 134 (484)
.+.|++++.||.|+||.||++.. .++..||+|.+........+.|.+|+.++++++||||+++++.+..+...++||||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF 83 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence 45688899999999999999995 56889999999766545567799999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----C
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----R 210 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~----~ 210 (484)
+++++|.+++.. ....+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++...... .
T Consensus 84 ~~~~~L~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lh~~-~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~ 161 (280)
T cd06611 84 CDGGALDSIMLE-LERGLTEPQIRYVCRQMLEALNFLHSH-KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRD 161 (280)
T ss_pred cCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCChhhEEECCCCCEEEccCccchhhcccccccc
Confidence 999999999864 235699999999999999999999999 9999999999999999999999999987654332 2
Q ss_pred cccCCCCCCCccccc-----CCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHH
Q 011519 211 SYSTNLAFTPPEYLR-----TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 285 (484)
Q Consensus 211 ~~~~t~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 285 (484)
...+++.|++||.+. +..++.++||||||+++|+|++|+.||................. ..-..+...+.++
T Consensus 162 ~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 238 (280)
T cd06611 162 TFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEP---PTLDQPSKWSSSF 238 (280)
T ss_pred eeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCC---CCcCCcccCCHHH
Confidence 346788999999975 23477899999999999999999988754321111111100000 0111234456789
Q ss_pred HHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 286 VRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 286 ~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
.+++..||..+|.+|||+.+++++-+
T Consensus 239 ~~li~~~l~~~p~~Rps~~~il~~~~ 264 (280)
T cd06611 239 NDFLKSCLVKDPDDRPTAAELLKHPF 264 (280)
T ss_pred HHHHHHHhccChhhCcCHHHHhcChh
Confidence 99999999999999999999998843
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-41 Score=317.52 Aligned_cols=250 Identities=22% Similarity=0.291 Sum_probs=201.8
Q ss_pred CcccccccCCCCCCceEEEEEeC-CC---cEEEEEEecCCCC-ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLE-NQ---FRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~-~~---~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 131 (484)
..+++.+.||+|+||.||+|... ++ ..||||+++.... .....|..|+.+++.++||||+++++++...+..++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 83 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII 83 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence 45677888999999999999953 33 3699999875432 2356799999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCCc
Q 011519 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS 211 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 211 (484)
|||+++|+|.+++... .+.+++.+++.++.|++.||.|||+. |++|+||||+||+++.++.+||+|||++........
T Consensus 84 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~~l~~al~~lH~~-g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~ 161 (269)
T cd05065 84 TEFMENGALDSFLRQN-DGQFTVIQLVGMLRGIAAGMKYLSEM-NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTS 161 (269)
T ss_pred EecCCCCcHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHHC-CEeecccChheEEEcCCCcEEECCCccccccccCcc
Confidence 9999999999999643 45689999999999999999999998 999999999999999999999999999876443211
Q ss_pred -------cc--CCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHH
Q 011519 212 -------YS--TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 281 (484)
Q Consensus 212 -------~~--~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (484)
.. .+..|+|||.+.+..++.++|||||||++||+++ |..||.............. ......+..+
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~-----~~~~~~~~~~ 236 (269)
T cd05065 162 DPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQ-----DYRLPPPMDC 236 (269)
T ss_pred ccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHc-----CCcCCCcccC
Confidence 11 1346999999998889999999999999999887 8877754322211111111 0111223445
Q ss_pred HHHHHHHHHHHhccCCCCCCChHHHHHHHHhh
Q 011519 282 GTELVRLASRCLQYEPRERPNPRSLVTALVTL 313 (484)
Q Consensus 282 ~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~ 313 (484)
+..+.+++.+||..+|++||++.+++..|+.+
T Consensus 237 ~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 237 PTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 67899999999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-40 Score=325.31 Aligned_cols=254 Identities=20% Similarity=0.304 Sum_probs=204.7
Q ss_pred cccccccCCCCCCceEEEEEeC--------CCcEEEEEEecCCCC-ccHHHHHHHHHHHhcC-CCCceeeeeeeeeeCCc
Q 011519 58 MENIVSEHGEKAPNVVYKGKLE--------NQFRIAVKRFNRSAW-PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDE 127 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~ 127 (484)
+|.+.+.||+|+||.||+|... .+..||+|.++.... ...+.+.+|+.+++++ +||||+++++++...+.
T Consensus 13 ~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 92 (334)
T cd05100 13 RLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGP 92 (334)
T ss_pred HeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCc
Confidence 5678899999999999999731 123689998875432 2356789999999999 79999999999999999
Q ss_pred eEEEEecCCCCCHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCC
Q 011519 128 RLLVAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV 193 (484)
Q Consensus 128 ~~lv~Ey~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~ 193 (484)
.++||||+++|+|.+++.... ...+++.++..++.||+.||.|||+. |++||||||+|||++.++
T Consensus 93 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~-givH~dlkp~Nill~~~~ 171 (334)
T cd05100 93 LYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ-KCIHRDLAARNVLVTEDN 171 (334)
T ss_pred eEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC-CeeccccccceEEEcCCC
Confidence 999999999999999996422 23478899999999999999999998 999999999999999999
Q ss_pred CceeeccCCccccCCCC------cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhcccc
Q 011519 194 NPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQ 266 (484)
Q Consensus 194 ~~kl~DfG~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~ 266 (484)
.+||+|||+++...... ...++..|+|||++.+..++.++||||||+++|||++ |..|+..............
T Consensus 172 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~ 251 (334)
T cd05100 172 VMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKE 251 (334)
T ss_pred cEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc
Confidence 99999999987654321 1223467999999998889999999999999999998 7777654432222211111
Q ss_pred ccccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhcCC
Q 011519 267 TLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (484)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 317 (484)
......+...+..+.+++.+||+.+|.+|||+.+++..|+.+....
T Consensus 252 -----~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~ 297 (334)
T cd05100 252 -----GHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVT 297 (334)
T ss_pred -----CCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhhc
Confidence 1111233455678999999999999999999999999999887544
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-41 Score=314.78 Aligned_cols=245 Identities=16% Similarity=0.183 Sum_probs=202.5
Q ss_pred ccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCC--ccHHHHHHHHHHHhcCCCCceeeeeeeeee-CCceEEEEec
Q 011519 59 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCE-GDERLLVAEY 134 (484)
Q Consensus 59 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~~~~~lv~Ey 134 (484)
|++++.||.|++|.||++. ..+++.||||.+..... ...+.+.+|+.++++++|||++++++.+.. ....++||||
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~ 81 (257)
T cd08223 2 YCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGF 81 (257)
T ss_pred ceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecc
Confidence 6788899999999999999 45678999999865432 234568899999999999999999998764 4467999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----C
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----R 210 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~----~ 210 (484)
+++++|.+++.......+++.++..++.|++.||.+||+. |++|+||||+||+++.++.++|+|||++...... .
T Consensus 82 ~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~-~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~ 160 (257)
T cd08223 82 CEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEK-HILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMAS 160 (257)
T ss_pred cCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCchhEEEecCCcEEEecccceEEecccCCccc
Confidence 9999999999754556789999999999999999999999 9999999999999999999999999998765432 2
Q ss_pred cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHH
Q 011519 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (484)
Q Consensus 211 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (484)
...+++.|+|||++.+..++.++||||||+++++|++|+.||................ ....+...++.+.+++.
T Consensus 161 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~li~ 235 (257)
T cd08223 161 TLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGK-----LPPMPKDYSPELGELIA 235 (257)
T ss_pred cccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcC-----CCCCccccCHHHHHHHH
Confidence 3457889999999998889999999999999999999998876433222111111111 11234456788999999
Q ss_pred HHhccCCCCCCChHHHHHH
Q 011519 291 RCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~ 309 (484)
+||+.||++|||+.+++.+
T Consensus 236 ~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 236 TMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred HHhccCcccCCCHHHHhcC
Confidence 9999999999999999876
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-40 Score=323.38 Aligned_cols=253 Identities=22% Similarity=0.324 Sum_probs=203.8
Q ss_pred cccccccCCCCCCceEEEEEe--------CCCcEEEEEEecCCCC-ccHHHHHHHHHHHhcC-CCCceeeeeeeeeeCCc
Q 011519 58 MENIVSEHGEKAPNVVYKGKL--------ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDE 127 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~ 127 (484)
++.+.+.||+|+||.||++.. .....||+|.++.... .....+.+|+.+++++ +||||+++++++...+.
T Consensus 13 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 92 (314)
T cd05099 13 RLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEGP 92 (314)
T ss_pred HeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCCc
Confidence 456778899999999999973 1245799999875432 2355788999999999 69999999999999899
Q ss_pred eEEEEecCCCCCHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCC
Q 011519 128 RLLVAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV 193 (484)
Q Consensus 128 ~~lv~Ey~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~ 193 (484)
.++||||+++|+|.+++.... ...+++..+..++.||+.||.|||+. |++||||||+|||++.++
T Consensus 93 ~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~-gi~H~dlkp~Nill~~~~ 171 (314)
T cd05099 93 LYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR-RCIHRDLAARNVLVTEDN 171 (314)
T ss_pred eEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC-CeeeccccceeEEEcCCC
Confidence 999999999999999996432 23588999999999999999999998 999999999999999999
Q ss_pred CceeeccCCccccCCCC------cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhcccc
Q 011519 194 NPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQ 266 (484)
Q Consensus 194 ~~kl~DfG~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~ 266 (484)
.+||+|||+++...... ...++..|+|||++.+..++.++||||||+++|+|++ |..||..............
T Consensus 172 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~ 251 (314)
T cd05099 172 VMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKLLRE 251 (314)
T ss_pred cEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Confidence 99999999998654321 1223467999999998889999999999999999999 7777654322221111111
Q ss_pred ccccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhcC
Q 011519 267 TLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316 (484)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 316 (484)
......+..++.++.+++.+||..+|++|||+.++++.|..+...
T Consensus 252 -----~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~ 296 (314)
T cd05099 252 -----GHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAA 296 (314)
T ss_pred -----CCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHH
Confidence 111123445567899999999999999999999999999988654
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-41 Score=328.41 Aligned_cols=250 Identities=16% Similarity=0.141 Sum_probs=198.5
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCC---CccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEe
Q 011519 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 133 (484)
+|++++.||+|+||+||+++. .+++.||||++.... ......+.+|+.++..++|+||+++++++...+..++|||
T Consensus 2 ~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~E 81 (331)
T cd05624 2 DFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMD 81 (331)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEe
Confidence 578889999999999999994 568899999986422 1123457889999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----
Q 011519 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 209 (484)
Q Consensus 134 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~---- 209 (484)
|++||+|.+++... ...+++..+..++.|++.||.|||+. ||+||||||+|||++.++.+||+|||++......
T Consensus 82 y~~gg~L~~~l~~~-~~~l~~~~~~~~~~qi~~~L~~lH~~-~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 159 (331)
T cd05624 82 YYVGGDLLTLLSKF-EDRLPEDMARFYIAEMVLAIHSIHQL-HYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQ 159 (331)
T ss_pred CCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeccCchHHEEEcCCCCEEEEeccceeeccCCCcee
Confidence 99999999999642 35689999999999999999999998 9999999999999999999999999998765432
Q ss_pred -CcccCCCCCCCcccccC-----CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHH
Q 011519 210 -RSYSTNLAFTPPEYLRT-----GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283 (484)
Q Consensus 210 -~~~~~t~~y~aPE~~~~-----~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (484)
....||+.|+|||++.+ +.++.++|||||||++|+|++|+.||................. ...........+.
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~-~~~~p~~~~~~~~ 238 (331)
T cd05624 160 SSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEE-RFQFPSHITDVSE 238 (331)
T ss_pred eccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCC-cccCCCccccCCH
Confidence 23468999999999875 4578899999999999999999999865432221111111000 0000111123567
Q ss_pred HHHHHHHHHhccCCCC--CCChHHHHHHH
Q 011519 284 ELVRLASRCLQYEPRE--RPNPRSLVTAL 310 (484)
Q Consensus 284 ~l~~li~~cl~~dp~~--Rps~~~il~~l 310 (484)
++.+++.+||..++++ |++++++++|.
T Consensus 239 ~~~~li~~ll~~~~~~~~~~~~~~~~~h~ 267 (331)
T cd05624 239 EAKDLIQRLICSRERRLGQNGIEDFKKHA 267 (331)
T ss_pred HHHHHHHHHccCchhhcCCCCHHHHhcCC
Confidence 8999999999876654 46889998873
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-40 Score=313.40 Aligned_cols=248 Identities=20% Similarity=0.310 Sum_probs=203.2
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCC
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~ 136 (484)
..+++.+.||+|+||.||++...++..+|+|.+.... .....|.+|+.+++.++|+||+++++.+.. ...+++|||++
T Consensus 6 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~~ 83 (260)
T cd05073 6 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMA 83 (260)
T ss_pred cceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeCC
Confidence 3567788899999999999997777789999987543 234678999999999999999999999887 77899999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCC-----c
Q 011519 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-----S 211 (484)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~-----~ 211 (484)
+|+|.+++.......+++..+..++.|++.||.|||+. |++|+||||+||+++.++.+||+|||++....... .
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~-~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~ 162 (260)
T cd05073 84 KGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR-NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREG 162 (260)
T ss_pred CCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhC-CccccccCcceEEEcCCCcEEECCCcceeeccCCCcccccC
Confidence 99999999755556689999999999999999999998 99999999999999999999999999987654322 1
Q ss_pred ccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHH
Q 011519 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (484)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (484)
..++..|+|||++.+..++.++|+|||||++|+++| |..||............... .....+...+..+.+++.
T Consensus 163 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~ 237 (260)
T cd05073 163 AKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG-----YRMPRPENCPEELYNIMM 237 (260)
T ss_pred CcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCC-----CCCCCcccCCHHHHHHHH
Confidence 234567999999998889999999999999999999 78777643222111111111 111123345678999999
Q ss_pred HHhccCCCCCCChHHHHHHHHh
Q 011519 291 RCLQYEPRERPNPRSLVTALVT 312 (484)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~l~~ 312 (484)
+||..+|++||++.+++..|+.
T Consensus 238 ~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 238 RCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred HHcccCcccCcCHHHHHHHHhc
Confidence 9999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=352.21 Aligned_cols=249 Identities=17% Similarity=0.205 Sum_probs=197.6
Q ss_pred CCcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCc--cHHHHHHHHHHHhcCCCCceeeeeeeeeeC--CceEE
Q 011519 56 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEG--DERLL 130 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~--~~~~l 130 (484)
+.+|.+++.||.|+||+||+|. ..++..||+|++...... ....|..|+.+|..|+|||||+++++|... ..+||
T Consensus 12 l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyI 91 (1021)
T PTZ00266 12 LNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYI 91 (1021)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEE
Confidence 4678999999999999999999 456788999998754322 355789999999999999999999988653 56899
Q ss_pred EEecCCCCCHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhcC------CCcccccccccceeecC-----------
Q 011519 131 VAEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSK------ERALYHDLNAYRIVFDD----------- 191 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~lH~~------~~ivH~Dlkp~Nill~~----------- 191 (484)
||||+++|+|.++|... ....+++..++.|+.||+.||.|||+. .+||||||||+||||+.
T Consensus 92 VMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~ 171 (1021)
T PTZ00266 92 LMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQ 171 (1021)
T ss_pred EEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccccccc
Confidence 99999999999999642 235799999999999999999999984 15999999999999964
Q ss_pred ------CCCceeeccCCccccCCC---CcccCCCCCCCcccccC--CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHh
Q 011519 192 ------DVNPRLSCFGLMKNSRDG---RSYSTNLAFTPPEYLRT--GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLI 260 (484)
Q Consensus 192 ------~~~~kl~DfG~a~~~~~~---~~~~~t~~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~ 260 (484)
.+.+||+|||++...... ....||+.|+|||++.+ ..++.++||||||||||+|+||..||........
T Consensus 172 ~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~q 251 (1021)
T PTZ00266 172 ANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQ 251 (1021)
T ss_pred ccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHH
Confidence 235899999999865432 34568999999999864 4488999999999999999999998864321110
Q ss_pred hhccccccccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 261 RDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
....+.... .......+.++.+||..||..+|.+|||+.+++.+
T Consensus 252 li~~lk~~p-----~lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h 295 (1021)
T PTZ00266 252 LISELKRGP-----DLPIKGKSKELNILIKNLLNLSAKERPSALQCLGY 295 (1021)
T ss_pred HHHHHhcCC-----CCCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhcc
Confidence 000011000 00112346789999999999999999999999976
|
|
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-41 Score=316.99 Aligned_cols=252 Identities=17% Similarity=0.250 Sum_probs=202.9
Q ss_pred HHHhcCCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCce
Q 011519 50 RTATSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER 128 (484)
Q Consensus 50 ~~~~~~f~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 128 (484)
+.+++++....++ |+|+||.||+|. ..++..|++|.+........+.+.+|+.+++.++|+||+++++++..++..
T Consensus 4 ~~~~~~~~~~~~l---g~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 80 (268)
T cd06624 4 EYEYDENGERVVL---GKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFF 80 (268)
T ss_pred ccccccCCceEEE---ecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEE
Confidence 4456777666555 999999999999 556889999999876655667899999999999999999999999999999
Q ss_pred EEEEecCCCCCHHhhhccCCCCCC--CHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecC-CCCceeeccCCccc
Q 011519 129 LLVAEYMPNDTLAKHLFHWETQPM--KWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-DVNPRLSCFGLMKN 205 (484)
Q Consensus 129 ~lv~Ey~~~gsL~~~l~~~~~~~l--~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~-~~~~kl~DfG~a~~ 205 (484)
++|+||+++++|.+++... ...+ ++..+..++.||+.||.|||+. |++||||||+||+++. ++.++|+|||++..
T Consensus 81 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~~qi~~al~~lH~~-~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~ 158 (268)
T cd06624 81 KIFMEQVPGGSLSALLRSK-WGPLKDNEQTIIFYTKQILEGLKYLHDN-QIVHRDIKGDNVLVNTYSGVVKISDFGTSKR 158 (268)
T ss_pred EEEEecCCCCCHHHHHHHh-cccCCCcHHHHHHHHHHHHHHHHHHHHC-CEeecCCCHHHEEEcCCCCeEEEecchhhee
Confidence 9999999999999999642 2345 7888999999999999999998 9999999999999975 67999999999876
Q ss_pred cCCC----CcccCCCCCCCcccccCCC--CCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCCh
Q 011519 206 SRDG----RSYSTNLAFTPPEYLRTGR--VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSS 279 (484)
Q Consensus 206 ~~~~----~~~~~t~~y~aPE~~~~~~--~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (484)
.... ....+++.|+|||++.+.. ++.++||||||+++|+|++|+.|+............ .........++.
T Consensus 159 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~---~~~~~~~~~~~~ 235 (268)
T cd06624 159 LAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFK---VGMFKIHPEIPE 235 (268)
T ss_pred cccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhh---hhhhccCCCCCc
Confidence 4322 2345788999999987543 788999999999999999999887532111000000 000011123455
Q ss_pred HHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 280 DEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 280 ~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
..++++.+++.+||+.+|++|||+.+++.+
T Consensus 236 ~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 236 SLSAEAKNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred ccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence 567889999999999999999999999986
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-41 Score=320.46 Aligned_cols=252 Identities=17% Similarity=0.243 Sum_probs=204.3
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCC-ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecC
Q 011519 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~ 135 (484)
+|++++.||.|+||.||++.. .++..||+|.+..... .....+.+|+.++++++||||+++++.+...+..++||||+
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYM 81 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeec
Confidence 578889999999999999995 4789999999875422 23467899999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC--CCcc
Q 011519 136 PNDTLAKHLFHWE-TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD--GRSY 212 (484)
Q Consensus 136 ~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~--~~~~ 212 (484)
++++|..++.... ...+++..+..++.|++.||.|||+..+++|+||||+||+++.++.++|+|||++..... ....
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 161 (286)
T cd06622 82 DAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAKTN 161 (286)
T ss_pred CCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCccccC
Confidence 9999999986321 236899999999999999999999744899999999999999999999999999876533 2345
Q ss_pred cCCCCCCCcccccCCC------CCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHH
Q 011519 213 STNLAFTPPEYLRTGR------VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 286 (484)
Q Consensus 213 ~~t~~y~aPE~~~~~~------~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 286 (484)
.+++.|+|||.+.+.. ++.++|||||||++|+|++|+.||........... ...... ......+..++.++.
T Consensus 162 ~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~ 239 (286)
T cd06622 162 IGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQ-LSAIVD-GDPPTLPSGYSDDAQ 239 (286)
T ss_pred CCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHH-HHHHhh-cCCCCCCcccCHHHH
Confidence 6788999999986543 58899999999999999999998864322211110 111111 111234455778999
Q ss_pred HHHHHHhccCCCCCCChHHHHHHHH
Q 011519 287 RLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 287 ~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
+|+.+||..+|++||++.+++++-+
T Consensus 240 ~li~~~l~~~p~~Rp~~~~l~~~~~ 264 (286)
T cd06622 240 DFVAKCLNKIPNRRPTYAQLLEHPW 264 (286)
T ss_pred HHHHHHcccCcccCCCHHHHhcChh
Confidence 9999999999999999999998754
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-40 Score=316.31 Aligned_cols=244 Identities=15% Similarity=0.229 Sum_probs=203.2
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCC-CccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecC
Q 011519 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~ 135 (484)
+|++++.||.|+||.||+|. ..+++.||+|.+.... ......+.+|+.+++.++||||+++++++..+...++|+||+
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYC 81 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEee
Confidence 56778889999999999999 4578899999987543 233567889999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----Cc
Q 011519 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RS 211 (484)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~----~~ 211 (484)
++++|.+++.. ..+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++...... ..
T Consensus 82 ~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lh~~-~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~ 157 (274)
T cd06609 82 GGGSCLDLLKP---GKLDETYIAFILREVLLGLEYLHEE-GKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNT 157 (274)
T ss_pred CCCcHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEECCCCCEEEcccccceeeccccccccc
Confidence 99999999953 3789999999999999999999998 9999999999999999999999999998776543 34
Q ss_pred ccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChH-HHHHHHHHHH
Q 011519 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD-EGTELVRLAS 290 (484)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~ 290 (484)
..+++.|+|||++.+..++.++||||||+++|+|+||..|+............... .....+.. .+..+.+++.
T Consensus 158 ~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~ 232 (274)
T cd06609 158 FVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKN-----NPPSLEGNKFSKPFKDFVS 232 (274)
T ss_pred ccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhc-----CCCCCcccccCHHHHHHHH
Confidence 56788899999999888999999999999999999999887543211111111111 11112222 5678999999
Q ss_pred HHhccCCCCCCChHHHHHHH
Q 011519 291 RCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~l 310 (484)
+||..+|++|||+++++.+-
T Consensus 233 ~~l~~~p~~Rpt~~~il~~~ 252 (274)
T cd06609 233 LCLNKDPKERPSAKELLKHK 252 (274)
T ss_pred HHhhCChhhCcCHHHHhhCh
Confidence 99999999999999999873
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-40 Score=314.38 Aligned_cols=243 Identities=18% Similarity=0.278 Sum_probs=199.9
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCcc---------HHHHHHHHHHHhcCCCCceeeeeeeeeeCCce
Q 011519 59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPD---------ARQFLEEARAVGQLRNRRLANLLGCCCEGDER 128 (484)
Q Consensus 59 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---------~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 128 (484)
+.+.+.||.|+||.||+|.. .+++.||+|.+....... .+.+.+|+.+++.++||||+++++++...+..
T Consensus 2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (267)
T cd06628 2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL 81 (267)
T ss_pred ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence 34556789999999999994 568899999886543221 24588999999999999999999999999999
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC
Q 011519 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 208 (484)
Q Consensus 129 ~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~ 208 (484)
++||||+++++|.+++. ..+.+++..+..++.|++.||.|||+. |++||||+|+||++++++.++|+|||+++....
T Consensus 82 ~lv~e~~~~~~L~~~l~--~~~~l~~~~~~~~~~~l~~~l~~lH~~-~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd06628 82 NIFLEYVPGGSVAALLN--NYGAFEETLVRNFVRQILKGLNYLHNR-GIIHRDIKGANILVDNKGGIKISDFGISKKLEA 158 (267)
T ss_pred EEEEEecCCCCHHHHHH--hccCccHHHHHHHHHHHHHHHHHHHhc-CcccccCCHHHEEEcCCCCEEecccCCCccccc
Confidence 99999999999999996 345689999999999999999999998 999999999999999999999999999876542
Q ss_pred C----------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCC
Q 011519 209 G----------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFS 278 (484)
Q Consensus 209 ~----------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (484)
. ....++..|+|||.+.+..++.++||||||+++|+|++|+.||......... ..... ......+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~----~~~~~-~~~~~~~ 233 (267)
T cd06628 159 NSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAI----FKIGE-NASPEIP 233 (267)
T ss_pred ccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHH----HHHhc-cCCCcCC
Confidence 1 1235678999999999888999999999999999999999988643211110 00000 1122344
Q ss_pred hHHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 279 SDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 279 ~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
...+..+.+++.+||+.||.+||++.+++++
T Consensus 234 ~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 264 (267)
T cd06628 234 SNISSEAIDFLEKTFEIDHNKRPTAAELLKH 264 (267)
T ss_pred cccCHHHHHHHHHHccCCchhCcCHHHHhhC
Confidence 5567889999999999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-41 Score=323.24 Aligned_cols=246 Identities=17% Similarity=0.194 Sum_probs=199.9
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCC--ccHHHHHHHHHHHhcCC-CCceeeeeeeeeeCCceEEEEe
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVAE 133 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~lv~E 133 (484)
..|++++.||+||.+.||++...+.+.||+|++..... ....-|.+|+.+|.+|+ |.+||++++|-..++.+|||||
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE 440 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVME 440 (677)
T ss_pred chhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEee
Confidence 57899999999999999999988888899998765432 23667999999999995 9999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCC---
Q 011519 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR--- 210 (484)
Q Consensus 134 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~--- 210 (484)
|=+. +|..+|.........| .+..+..||+.++.++|.. ||||.||||.|+|+- .|.+||+|||+|......+
T Consensus 441 ~Gd~-DL~kiL~k~~~~~~~~-~lk~ywkqML~aV~~IH~~-gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DTTsI 516 (677)
T KOG0596|consen 441 CGDI-DLNKILKKKKSIDPDW-FLKFYWKQMLLAVKTIHQH-GIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDTTSI 516 (677)
T ss_pred cccc-cHHHHHHhccCCCchH-HHHHHHHHHHHHHHHHHHh-ceeecCCCcccEEEE-eeeEEeeeechhcccCccccce
Confidence 9744 9999997644444445 7889999999999999998 999999999999998 6899999999999876643
Q ss_pred ---cccCCCCCCCcccccCC-----------CCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCC
Q 011519 211 ---SYSTNLAFTPPEYLRTG-----------RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQ 276 (484)
Q Consensus 211 ---~~~~t~~y~aPE~~~~~-----------~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (484)
+.+||+.||+||.+... ..++++||||||||||+|+.|+.||..... . ...+..+.++...-+
T Consensus 517 ~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n-~--~aKl~aI~~P~~~Ie 593 (677)
T KOG0596|consen 517 VKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIIN-Q--IAKLHAITDPNHEIE 593 (677)
T ss_pred eeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHH-H--HHHHHhhcCCCcccc
Confidence 56899999999988631 267899999999999999999988754321 1 122333333332222
Q ss_pred CChHHH-HHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 277 FSSDEG-TELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 277 ~~~~~~-~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
||..-. .++.+++..||..||++|||+.++|+|
T Consensus 594 fp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 594 FPDIPENDELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred ccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 332222 239999999999999999999999988
|
|
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-40 Score=314.91 Aligned_cols=250 Identities=22% Similarity=0.298 Sum_probs=201.9
Q ss_pred CcccccccCCCCCCceEEEEEeC-C---CcEEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLE-N---QFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~-~---~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 131 (484)
.+|++.+.||+|+||.||+|... + +..+|+|.++..... ..+.|.+|+.++..++||||+++++++...+..++|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 35677888999999999999842 2 347999998754322 345789999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCCc
Q 011519 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS 211 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 211 (484)
|||+++++|.+++.. ....+++.+++.++.|++.||.|||+. +++||||||+|||++.++.++|+|||++........
T Consensus 84 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~-~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~ 161 (267)
T cd05066 84 TEYMENGSLDAFLRK-HDGQFTVIQLVGMLRGIASGMKYLSDM-GYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE 161 (267)
T ss_pred EEcCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CEeehhhchhcEEECCCCeEEeCCCCcccccccccc
Confidence 999999999999964 234689999999999999999999998 999999999999999999999999999886543221
Q ss_pred -------ccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHH
Q 011519 212 -------YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283 (484)
Q Consensus 212 -------~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (484)
..++..|++||++.+..++.++||||||+++|++++ |..|+............... .....+...++
T Consensus 162 ~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 236 (267)
T cd05066 162 AAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEG-----YRLPAPMDCPA 236 (267)
T ss_pred eeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCC-----CcCCCCCCCCH
Confidence 122457999999998889999999999999999887 88877543221111111111 11122334567
Q ss_pred HHHHHHHHHhccCCCCCCChHHHHHHHHhh
Q 011519 284 ELVRLASRCLQYEPRERPNPRSLVTALVTL 313 (484)
Q Consensus 284 ~l~~li~~cl~~dp~~Rps~~~il~~l~~~ 313 (484)
.+.+++.+||+.+|.+|||+.++++.|..+
T Consensus 237 ~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 237 ALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred HHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 899999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-40 Score=318.54 Aligned_cols=252 Identities=23% Similarity=0.335 Sum_probs=200.5
Q ss_pred CcccccccCCCCCCceEEEEEeC------CCcEEEEEEecCCCC-ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 129 (484)
.+|.+++.||+|+||.||+|... .+..||+|.+..... .....+.+|+.+++.++||||+++++++...+..+
T Consensus 6 ~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 85 (288)
T cd05061 6 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTL 85 (288)
T ss_pred HHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcE
Confidence 46788899999999999999742 245799999875432 22446889999999999999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCC--------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccC
Q 011519 130 LVAEYMPNDTLAKHLFHWE--------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 201 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG 201 (484)
+||||+++|+|.+++.... ...+++..+..++.|++.||.|||+. +++||||||+||++++++.++|+|||
T Consensus 86 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~-~i~H~dikp~nili~~~~~~~L~Dfg 164 (288)
T cd05061 86 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK-KFVHRDLAARNCMVAHDFTVKIGDFG 164 (288)
T ss_pred EEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcCCCCChheEEEcCCCcEEECcCC
Confidence 9999999999999996421 13356788899999999999999998 99999999999999999999999999
Q ss_pred CccccCCC------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhcccccccccccc
Q 011519 202 LMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLE 274 (484)
Q Consensus 202 ~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 274 (484)
+++..... ....++..|+|||.+.++.++.++|||||||++|||++ |..|+............... ..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~-----~~ 239 (288)
T cd05061 165 MTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDG-----GY 239 (288)
T ss_pred ccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-----CC
Confidence 98754322 12234567999999998889999999999999999999 56665443222211111100 01
Q ss_pred CCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhh
Q 011519 275 GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQ 314 (484)
Q Consensus 275 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~ 314 (484)
...+...++.+.+++.+||+.||++|||+.++++.|+...
T Consensus 240 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 240 LDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 1123344678999999999999999999999999988754
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-41 Score=324.36 Aligned_cols=253 Identities=21% Similarity=0.295 Sum_probs=207.5
Q ss_pred ccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCcc-HHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCCC
Q 011519 59 ENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD-ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPN 137 (484)
Q Consensus 59 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~~ 137 (484)
..+.++||+|-||.|.++....+..||||.++.....+ ...|.+|+++|.+|+|||||.++|+|..++.+++|+||+++
T Consensus 540 L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmEn 619 (807)
T KOG1094|consen 540 LRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYMEN 619 (807)
T ss_pred eehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHhc
Confidence 34568899999999999999888999999998776555 47899999999999999999999999999999999999999
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCCcc-----
Q 011519 138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY----- 212 (484)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~----- 212 (484)
|+|.+|+..+....+......+|+.||+.||+||.+. ++|||||.+.|+|++.++++||+|||+++.+-.+..+
T Consensus 620 GDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~-nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vqgr 698 (807)
T KOG1094|consen 620 GDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESL-NFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQGR 698 (807)
T ss_pred CcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhh-chhhccccccceeecCcccEEecCcccccccccCCceeeecc
Confidence 9999999865444455667788999999999999998 9999999999999999999999999999965444322
Q ss_pred -cCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh--CCCCCCchhhHHhhhcccccccccccc---CCCChHHHHHHH
Q 011519 213 -STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS--GKHIPPSHALDLIRDRNIQTLTDSCLE---GQFSSDEGTELV 286 (484)
Q Consensus 213 -~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t--g~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~ 286 (484)
.-.+.|||||.+..++++.+||||+||+++||+++ ...|+.....+... .+...+.+.... ...|.-++..+.
T Consensus 699 ~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vv-en~~~~~~~~~~~~~l~~P~~cp~~ly 777 (807)
T KOG1094|consen 699 AVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVV-ENAGEFFRDQGRQVVLSRPPACPQGLY 777 (807)
T ss_pred eeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHH-HhhhhhcCCCCcceeccCCCcCcHHHH
Confidence 22478999999999999999999999999999765 45565433222111 122222221111 123566788999
Q ss_pred HHHHHHhccCCCCCCChHHHHHHHHhh
Q 011519 287 RLASRCLQYEPRERPNPRSLVTALVTL 313 (484)
Q Consensus 287 ~li~~cl~~dp~~Rps~~~il~~l~~~ 313 (484)
+++.+||..|..+|||++++..+|...
T Consensus 778 elml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 778 ELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred HHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 999999999999999999999998764
|
|
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-40 Score=313.10 Aligned_cols=248 Identities=15% Similarity=0.171 Sum_probs=204.1
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCC
Q 011519 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~ 136 (484)
+|++.+.+|.|+||.||+|.. .+++.+++|.+........+.+.+|+.++++++||||+++++++...+..+++|||++
T Consensus 4 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~~ 83 (262)
T cd06613 4 DYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCG 83 (262)
T ss_pred ceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCCC
Confidence 567778889999999999994 5678999999986655556789999999999999999999999999999999999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----Ccc
Q 011519 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSY 212 (484)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~----~~~ 212 (484)
+++|.+++.. ....+++..+..++.|++.||.|||+. +++|+||||+||++++++.++|+|||++...... ...
T Consensus 84 ~~~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lh~~-~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~ 161 (262)
T cd06613 84 GGSLQDIYQV-TRGPLSELQIAYVCRETLKGLAYLHET-GKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRKSF 161 (262)
T ss_pred CCcHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHHhC-CceecCCChhhEEECCCCCEEECccccchhhhhhhhccccc
Confidence 9999999864 225689999999999999999999998 9999999999999999999999999998765432 234
Q ss_pred cCCCCCCCcccccCC---CCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcc-ccccccccccCCCChHHHHHHHHH
Q 011519 213 STNLAFTPPEYLRTG---RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN-IQTLTDSCLEGQFSSDEGTELVRL 288 (484)
Q Consensus 213 ~~t~~y~aPE~~~~~---~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~l 288 (484)
.++..|+|||.+.+. .++.++||||||+++|+|+||+.|+............ ....... ....+...+.++.++
T Consensus 162 ~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l 239 (262)
T cd06613 162 IGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPP--KLKDKEKWSPVFHDF 239 (262)
T ss_pred cCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCc--cccchhhhhHHHHHH
Confidence 678889999999876 7899999999999999999999887543211111000 0100111 111234557889999
Q ss_pred HHHHhccCCCCCCChHHHHHH
Q 011519 289 ASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 289 i~~cl~~dp~~Rps~~~il~~ 309 (484)
+.+||..+|.+|||+.+++.+
T Consensus 240 i~~~l~~~p~~Rpt~~~il~~ 260 (262)
T cd06613 240 IKKCLTKDPKKRPTATKLLQH 260 (262)
T ss_pred HHHHcCCChhhCCCHHHHhcC
Confidence 999999999999999999865
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-40 Score=319.38 Aligned_cols=256 Identities=22% Similarity=0.322 Sum_probs=204.7
Q ss_pred CCcccccccCCCCCCceEEEEEeC-----CCcEEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCceeeeeeeeee--CCc
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKLE-----NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCE--GDE 127 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~--~~~ 127 (484)
...+.+++.||+|+||.||++.+. ++..||||.++..... ..+.|.+|+++++.++||||+++++++.. ...
T Consensus 3 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~ 82 (284)
T cd05038 3 KRHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRS 82 (284)
T ss_pred hhhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCc
Confidence 346677888999999999999843 3688999999866543 35679999999999999999999999877 557
Q ss_pred eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccC
Q 011519 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 207 (484)
Q Consensus 128 ~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~ 207 (484)
.++||||+++++|.+++... ...+++..+..++.|++.||.|||+. |++|+||||+||+++.++.++|+|||++....
T Consensus 83 ~~lv~e~~~~~~l~~~l~~~-~~~~~~~~~~~~~~~l~~aL~~lH~~-~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 160 (284)
T cd05038 83 LRLIMEYLPSGSLRDYLQRH-RDQINLKRLLLFSSQICKGMDYLGSQ-RYIHRDLAARNILVESEDLVKISDFGLAKVLP 160 (284)
T ss_pred eEEEEecCCCCCHHHHHHhC-ccccCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHhEEEcCCCCEEEcccccccccc
Confidence 89999999999999999642 33589999999999999999999998 99999999999999999999999999998765
Q ss_pred CCC-------cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhh----------hcccccccc
Q 011519 208 DGR-------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIR----------DRNIQTLTD 270 (484)
Q Consensus 208 ~~~-------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~----------~~~~~~~~~ 270 (484)
... ...++..|++||.+.+..++.++||||||++++||+||..|+......... .........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (284)
T cd05038 161 EDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLK 240 (284)
T ss_pred cCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHH
Confidence 321 123345699999998888999999999999999999999876543221110 000001111
Q ss_pred ccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhh
Q 011519 271 SCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL 313 (484)
Q Consensus 271 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~ 313 (484)
.......+..++..+.+|+.+||+.+|++|||+.+|++.|+.+
T Consensus 241 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 241 EGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred cCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 1111122334567899999999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-41 Score=330.87 Aligned_cols=237 Identities=17% Similarity=0.170 Sum_probs=190.2
Q ss_pred CCCCCCceEEEEE-eCCCcEEEEEEecCCCCc---cHHHHHHHHHHHhcC---CCCceeeeeeeeeeCCceEEEEecCCC
Q 011519 65 HGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP---DARQFLEEARAVGQL---RNRRLANLLGCCCEGDERLLVAEYMPN 137 (484)
Q Consensus 65 lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l---~hpniv~l~~~~~~~~~~~lv~Ey~~~ 137 (484)
||+|+||+||+|+ ..+++.||||++...... ....+..|..++..+ .||||+++++.+.+.+..++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 6999999999999 456899999998643221 233456677777665 699999999999999999999999999
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC----CCccc
Q 011519 138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSYS 213 (484)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~----~~~~~ 213 (484)
|+|.+++. ..+.+++..+..++.||+.||.|||+. ||+||||||+|||++.++.+||+|||++..... .....
T Consensus 81 g~L~~~l~--~~~~~~~~~~~~~~~qil~al~~LH~~-~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 157 (330)
T cd05586 81 GELFWHLQ--KEGRFSEDRAKFYIAELVLALEHLHKY-DIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTFC 157 (330)
T ss_pred ChHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCccCcc
Confidence 99999986 445799999999999999999999999 999999999999999999999999999875322 23456
Q ss_pred CCCCCCCcccccCC-CCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCC-hHHHHHHHHHHHH
Q 011519 214 TNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFS-SDEGTELVRLASR 291 (484)
Q Consensus 214 ~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~ 291 (484)
||+.|+|||++.+. .++.++|||||||++|+|+||..||................ ..++ ...+.++.+|+.+
T Consensus 158 gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~------~~~~~~~~~~~~~~li~~ 231 (330)
T cd05586 158 GTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGK------VRFPKNVLSDEGRQFVKG 231 (330)
T ss_pred CCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCC------CCCCCccCCHHHHHHHHH
Confidence 89999999998764 47999999999999999999999986543222211111100 0111 2346789999999
Q ss_pred HhccCCCCCC----ChHHHHHHH
Q 011519 292 CLQYEPRERP----NPRSLVTAL 310 (484)
Q Consensus 292 cl~~dp~~Rp----s~~~il~~l 310 (484)
||..||.+|| ++.++++|-
T Consensus 232 ~L~~~P~~R~~~~~~~~~ll~h~ 254 (330)
T cd05586 232 LLNRNPQHRLGAHRDAVELKEHP 254 (330)
T ss_pred HcCCCHHHCCCCCCCHHHHhcCc
Confidence 9999999998 577777663
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-40 Score=315.04 Aligned_cols=247 Identities=21% Similarity=0.288 Sum_probs=199.4
Q ss_pred cccccCCCCCCceEEEEEeC-CC---cEEEEEEecCCCC-ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEec
Q 011519 60 NIVSEHGEKAPNVVYKGKLE-NQ---FRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (484)
Q Consensus 60 ~~~~~lG~G~~g~Vy~~~~~-~~---~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey 134 (484)
+..+.||+|+||.||+|+.. ++ ..+|||.++.... ...+.+.+|+.+++.++||||+++++++...+..++||||
T Consensus 8 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (268)
T cd05063 8 TKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIITEY 87 (268)
T ss_pred eEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEEEEc
Confidence 44566799999999999953 33 3799999875532 2356789999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCCc---
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS--- 211 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~--- 211 (484)
+++++|.+++.. ..+.+++..+..++.|++.||.|||+. |++|+||||+||++++++.+||+|||++........
T Consensus 88 ~~~~~L~~~~~~-~~~~~~~~~~~~~~~~l~~al~~lH~~-~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 165 (268)
T cd05063 88 MENGALDKYLRD-HDGEFSSYQLVGMLRGIAAGMKYLSDM-NYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTY 165 (268)
T ss_pred CCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccccchhhEEEcCCCcEEECCCccceecccccccce
Confidence 999999999964 235689999999999999999999998 999999999999999999999999999876543211
Q ss_pred ----ccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHHHH
Q 011519 212 ----YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 286 (484)
Q Consensus 212 ----~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 286 (484)
...++.|+|||++.+..++.++|||||||++|||++ |..|+............... .....+...+..+.
T Consensus 166 ~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~-----~~~~~~~~~~~~~~ 240 (268)
T cd05063 166 TTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDG-----FRLPAPMDCPSAVY 240 (268)
T ss_pred eccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcC-----CCCCCCCCCCHHHH
Confidence 112356999999988889999999999999999998 88887543222111111111 11122334567899
Q ss_pred HHHHHHhccCCCCCCChHHHHHHHHhh
Q 011519 287 RLASRCLQYEPRERPNPRSLVTALVTL 313 (484)
Q Consensus 287 ~li~~cl~~dp~~Rps~~~il~~l~~~ 313 (484)
+++.+||+.+|++||++.++++.|..+
T Consensus 241 ~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 241 QLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred HHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 999999999999999999999999764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-40 Score=311.82 Aligned_cols=243 Identities=23% Similarity=0.324 Sum_probs=196.2
Q ss_pred ccCCCCCCceEEEEEe-CC---CcEEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCCC
Q 011519 63 SEHGEKAPNVVYKGKL-EN---QFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPN 137 (484)
Q Consensus 63 ~~lG~G~~g~Vy~~~~-~~---~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~~ 137 (484)
++||+|+||.||+|.. .. +..||+|.+...... ..+.+.+|+.+++.+.||||+++++++. .+..++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 3579999999999973 22 368999999865543 3567899999999999999999999875 5568999999999
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCCc------
Q 011519 138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS------ 211 (484)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~------ 211 (484)
|+|.+++.. ...+++..+..++.|++.||.|||+. +++|+||||+|||++.++.+||+|||+++.......
T Consensus 80 ~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lh~~-~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~ 156 (257)
T cd05060 80 GPLLKYLKK--RREIPVSDLKELAHQVAMGMAYLESK-HFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATT 156 (257)
T ss_pred CcHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHhhc-CeeccCcccceEEEcCCCcEEeccccccceeecCCccccccc
Confidence 999999973 34689999999999999999999998 999999999999999999999999999886543321
Q ss_pred -ccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHH
Q 011519 212 -YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289 (484)
Q Consensus 212 -~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 289 (484)
..++..|+|||.+.+..++.++||||||+++|+|++ |..|+............ ........+...+..+.+++
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~li 231 (257)
T cd05060 157 AGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAML-----ESGERLPRPEECPQEIYSIM 231 (257)
T ss_pred CccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHH-----HcCCcCCCCCCCCHHHHHHH
Confidence 112457999999998889999999999999999998 88776543221111110 01111123445567899999
Q ss_pred HHHhccCCCCCCChHHHHHHHHhhh
Q 011519 290 SRCLQYEPRERPNPRSLVTALVTLQ 314 (484)
Q Consensus 290 ~~cl~~dp~~Rps~~~il~~l~~~~ 314 (484)
.+||..+|++|||+.++++.|+.+.
T Consensus 232 ~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 232 LSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred HHHhcCChhhCcCHHHHHHHHHhcc
Confidence 9999999999999999999998653
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-40 Score=310.11 Aligned_cols=241 Identities=27% Similarity=0.413 Sum_probs=198.5
Q ss_pred cCCCCCCceEEEEEeCCCcEEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCCCCCHHh
Q 011519 64 EHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAK 142 (484)
Q Consensus 64 ~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~~gsL~~ 142 (484)
.||.|+||.||++...+++.||+|.+...... ....+.+|++++++++||||+++++++......++||||+++++|.+
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~ 81 (251)
T cd05041 2 KIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLLT 81 (251)
T ss_pred ccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHHH
Confidence 57999999999999666899999998765543 35679999999999999999999999999999999999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCC------cccCCC
Q 011519 143 HLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR------SYSTNL 216 (484)
Q Consensus 143 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~------~~~~t~ 216 (484)
++.. ....+++..+..++.|++.||.|||+. +++||||||+||+++.++.++|+|||++....... ....+.
T Consensus 82 ~l~~-~~~~~~~~~~~~~~~~~~~~l~~lH~~-~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~ 159 (251)
T cd05041 82 FLRK-KKNRLTVKKLLQMSLDAAAGMEYLESK-NCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPI 159 (251)
T ss_pred HHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhC-CEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCccee
Confidence 9964 234688999999999999999999998 99999999999999999999999999987654221 122345
Q ss_pred CCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHHhcc
Q 011519 217 AFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQY 295 (484)
Q Consensus 217 ~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 295 (484)
.|+|||.+.++.++.++|+||||+++|+|+| |..|+............. .......+...+..+.+++.+||..
T Consensus 160 ~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~li~~~l~~ 234 (251)
T cd05041 160 KWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIE-----SGYRMPAPQLCPEEIYRLMLQCWAY 234 (251)
T ss_pred ccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHh-----cCCCCCCCccCCHHHHHHHHHHhcc
Confidence 7999999988889999999999999999999 666665432222111111 1111123445567899999999999
Q ss_pred CCCCCCChHHHHHHHH
Q 011519 296 EPRERPNPRSLVTALV 311 (484)
Q Consensus 296 dp~~Rps~~~il~~l~ 311 (484)
+|++|||+.++++.|+
T Consensus 235 ~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 235 DPENRPSFSEIYNELQ 250 (251)
T ss_pred ChhhCcCHHHHHHHhh
Confidence 9999999999999885
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-41 Score=329.68 Aligned_cols=251 Identities=18% Similarity=0.233 Sum_probs=197.4
Q ss_pred CCcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCC--ccHHHHHHHHHHHhcCCCCceeeeeeeeeeC------C
Q 011519 56 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEG------D 126 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~------~ 126 (484)
...|.+++.||.|+||+||+|. ..+++.||||++..... ...+.+.+|+.+++.++||||+++++++... .
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 93 (343)
T cd07878 14 PERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFN 93 (343)
T ss_pred hhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccC
Confidence 4578888999999999999999 46788999999975432 2345678999999999999999999987543 3
Q ss_pred ceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCcccc
Q 011519 127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 206 (484)
Q Consensus 127 ~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~ 206 (484)
..++++|++ +++|.+++. .+.+++..+..++.||+.||.|||+. ||+||||||+|||++.++.+||+|||+++..
T Consensus 94 ~~~~~~~~~-~~~l~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~ 168 (343)
T cd07878 94 EVYLVTNLM-GADLNNIVK---CQKLSDEHVQFLIYQLLRGLKYIHSA-GIIHRDLKPSNVAVNEDCELRILDFGLARQA 168 (343)
T ss_pred cEEEEeecC-CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC-CeecccCChhhEEECCCCCEEEcCCccceec
Confidence 578999998 779998884 45699999999999999999999999 9999999999999999999999999999876
Q ss_pred CCC-CcccCCCCCCCcccccC-CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhc-------ccccc---------
Q 011519 207 RDG-RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR-------NIQTL--------- 268 (484)
Q Consensus 207 ~~~-~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~-------~~~~~--------- 268 (484)
... ....+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||........... .....
T Consensus 169 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (343)
T cd07878 169 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHA 248 (343)
T ss_pred CCCcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhH
Confidence 543 34578999999999876 4689999999999999999999988864321100000 00000
Q ss_pred ---ccc---cccC---CCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 269 ---TDS---CLEG---QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 269 ---~~~---~~~~---~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
... .... ......++.+.+|+.+||..||.+|||+.+++.|-+
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~ 300 (343)
T cd07878 249 RKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPY 300 (343)
T ss_pred HHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcc
Confidence 000 0000 000123456889999999999999999999998843
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-40 Score=319.48 Aligned_cols=253 Identities=20% Similarity=0.291 Sum_probs=197.6
Q ss_pred cccccccCCCCCCceEEEEEeC-----------------CCcEEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCceeeee
Q 011519 58 MENIVSEHGEKAPNVVYKGKLE-----------------NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLL 119 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~~-----------------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~ 119 (484)
+|.+.+.||+|+||+||++... ++..||||.+...... ....|.+|+.+++.++||||++++
T Consensus 6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~ 85 (296)
T cd05095 6 RLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLL 85 (296)
T ss_pred hceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEE
Confidence 4678888999999999998522 2456999999765332 346799999999999999999999
Q ss_pred eeeeeCCceEEEEecCCCCCHHhhhccCC---------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeec
Q 011519 120 GCCCEGDERLLVAEYMPNDTLAKHLFHWE---------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD 190 (484)
Q Consensus 120 ~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~---------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~ 190 (484)
+++...+..++||||+++|+|.+++.... ...+++..+..++.||+.||.|||+. |++|+||||+|||++
T Consensus 86 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~-~i~H~dlkp~Nili~ 164 (296)
T cd05095 86 AVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL-NFVHRDLATRNCLVG 164 (296)
T ss_pred EEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC-CeecccCChheEEEc
Confidence 99999999999999999999999986422 12477889999999999999999999 999999999999999
Q ss_pred CCCCceeeccCCccccCCCC------cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh--CCCCCCchhhHHhhh
Q 011519 191 DDVNPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS--GKHIPPSHALDLIRD 262 (484)
Q Consensus 191 ~~~~~kl~DfG~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t--g~~p~~~~~~~~~~~ 262 (484)
.++.++|+|||++....... ...+++.|++||...++.++.++|||||||++|||+| |..|+..........
T Consensus 165 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~ 244 (296)
T cd05095 165 KNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIE 244 (296)
T ss_pred CCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHH
Confidence 99999999999987653321 2233568999999888889999999999999999998 555554322111111
Q ss_pred cccccccc--ccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 263 RNIQTLTD--SCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 263 ~~~~~~~~--~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
........ .......+..+++.+.+|+.+||+.||++|||+.+|++.|+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 245 NTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred HHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 00000000 00001123345678999999999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-41 Score=326.99 Aligned_cols=249 Identities=17% Similarity=0.140 Sum_probs=197.6
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCC---ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEe
Q 011519 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 133 (484)
+|++++.||+|+||+||++.. .+++.||+|++..... .....+..|+.++..++|+||+++++++.+.+..++|||
T Consensus 2 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (332)
T cd05623 2 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMD 81 (332)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEe
Confidence 567888899999999999994 5678899999864221 123457889999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----
Q 011519 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 209 (484)
Q Consensus 134 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~---- 209 (484)
|+++|+|.+++.+ ....+++..+..++.||+.||.|||+. +++||||||+|||++.++.+||+|||++......
T Consensus 82 y~~~g~L~~~l~~-~~~~l~~~~~~~~~~qi~~al~~lH~~-~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~ 159 (332)
T cd05623 82 YYVGGDLLTLLSK-FEDRLPEDMARFYLAEMVIAIDSVHQL-HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQ 159 (332)
T ss_pred ccCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCHHHEEECCCCCEEEeecchheecccCCcce
Confidence 9999999999964 235689999999999999999999998 9999999999999999999999999998754322
Q ss_pred -CcccCCCCCCCccccc-----CCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHH
Q 011519 210 -RSYSTNLAFTPPEYLR-----TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283 (484)
Q Consensus 210 -~~~~~t~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (484)
....||+.|+|||++. ...++.++|||||||++|||++|+.||................. ..........+++
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~-~~~~p~~~~~~s~ 238 (332)
T cd05623 160 SSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKE-RFQFPAQVTDVSE 238 (332)
T ss_pred ecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCc-cccCCCccccCCH
Confidence 2346899999999986 34578999999999999999999999875432222111111100 0001111234578
Q ss_pred HHHHHHHHHhccCCCC--CCChHHHHHH
Q 011519 284 ELVRLASRCLQYEPRE--RPNPRSLVTA 309 (484)
Q Consensus 284 ~l~~li~~cl~~dp~~--Rps~~~il~~ 309 (484)
++.+|+.+|+..++++ |+++.++++|
T Consensus 239 ~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 239 DAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred HHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 8999999998665544 6899999988
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-41 Score=331.32 Aligned_cols=250 Identities=15% Similarity=0.195 Sum_probs=197.2
Q ss_pred CCcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCC--CccHHHHHHHHHHHhcCCCCceeeeeeeeeeC------C
Q 011519 56 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEG------D 126 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~------~ 126 (484)
..+|.+++.||+|+||.||++. ...++.||||++.... ......+.+|+.+++.++||||+++++++... .
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~ 102 (364)
T cd07875 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 102 (364)
T ss_pred hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccC
Confidence 4577888999999999999999 4568899999997542 22355788999999999999999999987543 3
Q ss_pred ceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCcccc
Q 011519 127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 206 (484)
Q Consensus 127 ~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~ 206 (484)
..++||||+++ +|.+.+. ..+++..+..++.|++.||.|||+. ||+||||||+|||++.++.+||+|||+++..
T Consensus 103 ~~~lv~e~~~~-~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~ 176 (364)
T cd07875 103 DVYIVMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTA 176 (364)
T ss_pred eEEEEEeCCCC-CHHHHHH----hcCCHHHHHHHHHHHHHHHHHHhhC-CeecCCCCHHHEEECCCCcEEEEeCCCcccc
Confidence 57999999965 7887774 2488999999999999999999998 9999999999999999999999999999875
Q ss_pred CCC---CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcccccc---------------
Q 011519 207 RDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL--------------- 268 (484)
Q Consensus 207 ~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~--------------- 268 (484)
... ....+|+.|+|||++.+..++.++|||||||++|+|++|+.||...............+
T Consensus 177 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (364)
T cd07875 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTV 256 (364)
T ss_pred CCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHH
Confidence 443 34568899999999998889999999999999999999999886432111100000000
Q ss_pred ------------------ccccc---cCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 269 ------------------TDSCL---EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 269 ------------------~~~~~---~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
..... ........+..+.+|+.+||+.||.+|||+.++++|-+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~ 320 (364)
T cd07875 257 RTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 320 (364)
T ss_pred HHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCcc
Confidence 00000 00011123467899999999999999999999999843
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-40 Score=312.70 Aligned_cols=246 Identities=18% Similarity=0.200 Sum_probs=205.0
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCC--CccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEec
Q 011519 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey 134 (484)
+|.+++.||.|+||.||++. ..+++.||+|.+.... ....+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 36778889999999999999 5678899999986532 22345789999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----C
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----R 210 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~----~ 210 (484)
+++++|.+++.......+++.+++.++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++...... .
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~-~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~ 159 (256)
T cd08218 81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDR-KILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELAR 159 (256)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhhh
Confidence 9999999999754445689999999999999999999998 9999999999999999999999999998765443 2
Q ss_pred cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHH
Q 011519 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (484)
Q Consensus 211 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (484)
...+++.|+|||++.+...+.++|+|||||++++|++|+.|+................ ....+...+.++.+++.
T Consensus 160 ~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~li~ 234 (256)
T cd08218 160 TCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGS-----YPPVSSHYSYDLRNLVS 234 (256)
T ss_pred hccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCC-----CCCCcccCCHHHHHHHH
Confidence 3457888999999998889999999999999999999998876432221111111111 11234455778999999
Q ss_pred HHhccCCCCCCChHHHHHH
Q 011519 291 RCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~ 309 (484)
+||+.+|++||++.+++.+
T Consensus 235 ~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 235 QLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred HHhhCChhhCcCHHHHhhC
Confidence 9999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-40 Score=318.72 Aligned_cols=250 Identities=23% Similarity=0.338 Sum_probs=200.8
Q ss_pred CcccccccCCCCCCceEEEEEeC------CCcEEEEEEecCCCCcc-HHHHHHHHHHHhcCCCCceeeeeeeeeeCCceE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWPD-ARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 129 (484)
.++++++.||+|+||.||+|... ++..||+|.+....... .+.|.+|+.+++.++||||+++++++..++..+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (288)
T cd05050 5 NNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMC 84 (288)
T ss_pred HhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccE
Confidence 35678889999999999999853 46789999987654322 456899999999999999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCC--------------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceee
Q 011519 130 LVAEYMPNDTLAKHLFHWE--------------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF 189 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~~~--------------------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill 189 (484)
+||||+++|+|.+++.... ...+++..++.++.|++.||.|||+. +++||||||+||++
T Consensus 85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~-~i~H~dl~p~nil~ 163 (288)
T cd05050 85 LLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER-KFVHRDLATRNCLV 163 (288)
T ss_pred EEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC-CeecccccHhheEe
Confidence 9999999999999996321 12478899999999999999999998 99999999999999
Q ss_pred cCCCCceeeccCCccccCCC------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhh
Q 011519 190 DDDVNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRD 262 (484)
Q Consensus 190 ~~~~~~kl~DfG~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~ 262 (484)
++++.++|+|||++...... .....++.|+|||.+.+..++.++|||||||++|+|++ |..||..........
T Consensus 164 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~~~ 243 (288)
T cd05050 164 GENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIY 243 (288)
T ss_pred cCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 99999999999998754322 12234567999999988889999999999999999998 766664332221111
Q ss_pred ccccccccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHh
Q 011519 263 RNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVT 312 (484)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~ 312 (484)
.. .... ....+...+..+.+|+.+||+.||++|||+.++++.|++
T Consensus 244 ~~----~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 244 YV----RDGN-VLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred HH----hcCC-CCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 10 0000 011233456789999999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-40 Score=313.46 Aligned_cols=245 Identities=22% Similarity=0.308 Sum_probs=195.3
Q ss_pred cCCCCCCceEEEEEe-CCCc--EEEEEEecCCCC-ccHHHHHHHHHHHhcC-CCCceeeeeeeeeeCCceEEEEecCCCC
Q 011519 64 EHGEKAPNVVYKGKL-ENQF--RIAVKRFNRSAW-PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMPND 138 (484)
Q Consensus 64 ~lG~G~~g~Vy~~~~-~~~~--~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~Ey~~~g 138 (484)
.||+|+||.||+|.. .++. .+++|.++.... ...+.+.+|+.++.++ +||||+++++++...+..++||||+++|
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHG 81 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCC
Confidence 469999999999995 3443 478888875432 2355788999999999 7999999999999999999999999999
Q ss_pred CHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCcc
Q 011519 139 TLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK 204 (484)
Q Consensus 139 sL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~ 204 (484)
+|.+++.... ...+++.++..++.|++.||.|||+. |++|+||||+|||+++++.+||+|||++.
T Consensus 82 ~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~-~i~H~dikp~nili~~~~~~kl~dfgl~~ 160 (270)
T cd05047 82 NLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK-QFIHRDLAARNILVGENYVAKIADFGLSR 160 (270)
T ss_pred cHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC-CEeecccccceEEEcCCCeEEECCCCCcc
Confidence 9999996422 12478999999999999999999998 99999999999999999999999999986
Q ss_pred ccCCC---CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChH
Q 011519 205 NSRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD 280 (484)
Q Consensus 205 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (484)
..... .....+..|+|||++.+..++.++||||||+++|||++ |..||............. .......+..
T Consensus 161 ~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~-----~~~~~~~~~~ 235 (270)
T cd05047 161 GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP-----QGYRLEKPLN 235 (270)
T ss_pred ccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHh-----CCCCCCCCCc
Confidence 43221 12233567999999988889999999999999999997 887775432221111111 1111122334
Q ss_pred HHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhh
Q 011519 281 EGTELVRLASRCLQYEPRERPNPRSLVTALVTLQ 314 (484)
Q Consensus 281 ~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~ 314 (484)
.+.++.+++.+||..||.+|||+.+++..|..+.
T Consensus 236 ~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 236 CDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred CCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 5678999999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-40 Score=313.55 Aligned_cols=244 Identities=25% Similarity=0.331 Sum_probs=191.7
Q ss_pred cCCCCCCceEEEEEeC----CCcEEEEEEecCCC-CccHHHHHHHHHHHhcCCCCceeeeeeeee-eCCceEEEEecCCC
Q 011519 64 EHGEKAPNVVYKGKLE----NQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCC-EGDERLLVAEYMPN 137 (484)
Q Consensus 64 ~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~~~~~~lv~Ey~~~ 137 (484)
.||+|+||.||+|... ++..||||.+.... ....+.+.+|+.+++.++||||+++++++. .++..++||||+.+
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~ 81 (262)
T cd05058 2 VIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMKH 81 (262)
T ss_pred cccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCCC
Confidence 4699999999999842 24579999986433 233567889999999999999999999775 45568999999999
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC--------
Q 011519 138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-------- 209 (484)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~-------- 209 (484)
|+|.+++... ...+++..+..++.||+.||.|||+. +++||||||+|||+++++.+||+|||+++.....
T Consensus 82 ~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 159 (262)
T cd05058 82 GDLRNFIRSE-THNPTVKDLIGFGLQVAKGMEYLASK-KFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNH 159 (262)
T ss_pred CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC-CccccccCcceEEEcCCCcEEECCccccccccCCcceeeccc
Confidence 9999999642 34567888899999999999999998 9999999999999999999999999998754321
Q ss_pred CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCC-CchhhHHhhhccccccccccccCCCChHHHHHHHHH
Q 011519 210 RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP-PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288 (484)
Q Consensus 210 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 288 (484)
....++..|+|||.+.+..++.++|||||||++|||++|+.|+ .............. ......+...+..+.++
T Consensus 160 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l 234 (262)
T cd05058 160 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQ-----GRRLLQPEYCPDPLYEV 234 (262)
T ss_pred ccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhc-----CCCCCCCCcCCHHHHHH
Confidence 1234467899999998888999999999999999999966544 32211111110000 00111223345789999
Q ss_pred HHHHhccCCCCCCChHHHHHHHHhhh
Q 011519 289 ASRCLQYEPRERPNPRSLVTALVTLQ 314 (484)
Q Consensus 289 i~~cl~~dp~~Rps~~~il~~l~~~~ 314 (484)
+..||..+|++||++.+++..|+.+.
T Consensus 235 i~~cl~~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 235 MLSCWHPKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred HHHHcCCChhhCCCHHHHHHHHHHHh
Confidence 99999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-40 Score=313.27 Aligned_cols=251 Identities=21% Similarity=0.287 Sum_probs=203.3
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCC-ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecC
Q 011519 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~ 135 (484)
+|++++.||.|+||+||+|. ..++..+++|++..... .....+.+|+.+++.++|+||+++++.+...+..++||||+
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~ 81 (267)
T cd06610 2 DYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYL 81 (267)
T ss_pred cceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEecc
Confidence 56778889999999999999 45788999999975432 24567899999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCC----
Q 011519 136 PNDTLAKHLFHWET-QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---- 210 (484)
Q Consensus 136 ~~gsL~~~l~~~~~-~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~---- 210 (484)
++++|.+++..... ..+++..+..++.|++.||.|||+. |++|+||||+||++++++.++|+|||++.......
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~-~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~ 160 (267)
T cd06610 82 SGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSN-GQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTR 160 (267)
T ss_pred CCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHhEEEcCCCCEEEcccchHHHhccCccccc
Confidence 99999999964322 5689999999999999999999998 99999999999999999999999999987654332
Q ss_pred ----cccCCCCCCCcccccCC-CCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHH
Q 011519 211 ----SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 285 (484)
Q Consensus 211 ----~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 285 (484)
...++..|++||++... .++.++|+||||+++++|++|+.|+.............................+..+
T Consensus 161 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (267)
T cd06610 161 KVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYSKSF 240 (267)
T ss_pred cccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCCCCcCCccccccccHHH
Confidence 23578899999998876 6899999999999999999999887543221111111111111111111113556889
Q ss_pred HHHHHHHhccCCCCCCChHHHHHH
Q 011519 286 VRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 286 ~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
.+++.+||..||++|||+.+++.|
T Consensus 241 ~~li~~~l~~~p~~Rp~~~~ll~~ 264 (267)
T cd06610 241 RKMISLCLQKDPSKRPTAEELLKH 264 (267)
T ss_pred HHHHHHHcCCChhhCcCHHHHhhC
Confidence 999999999999999999999986
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-40 Score=312.28 Aligned_cols=246 Identities=25% Similarity=0.372 Sum_probs=201.4
Q ss_pred CCcccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecC
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~ 135 (484)
+..|.+.+.||+|+||.||++.. +++.||+|.++... ....+.+|+.+++.++||||+++++++... ..++||||+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~ 80 (254)
T cd05083 5 LQKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELM 80 (254)
T ss_pred HHHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECC
Confidence 35678888899999999999975 56789999986543 345789999999999999999999998664 479999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-CcccC
Q 011519 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-RSYST 214 (484)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~-~~~~~ 214 (484)
++++|.+++.......+++..++.++.|++.||.|||+. |++||||||+||+++.++.+||+|||++...... .....
T Consensus 81 ~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~ 159 (254)
T cd05083 81 SKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESK-KLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKL 159 (254)
T ss_pred CCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccccCcceEEEcCCCcEEECCCccceeccccCCCCCC
Confidence 999999999755555689999999999999999999998 9999999999999999999999999998765433 22334
Q ss_pred CCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHHh
Q 011519 215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 293 (484)
Q Consensus 215 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 293 (484)
+..|+|||.+.+..++.++|+||||+++|+|++ |..||.............. ......+...+..+.+++.+||
T Consensus 160 ~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~li~~~l 234 (254)
T cd05083 160 PVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEK-----GYRMEPPEGCPADVYVLMTSCW 234 (254)
T ss_pred CceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhC-----CCCCCCCCcCCHHHHHHHHHHc
Confidence 567999999988889999999999999999998 8877654432222111111 1111223445678999999999
Q ss_pred ccCCCCCCChHHHHHHHH
Q 011519 294 QYEPRERPNPRSLVTALV 311 (484)
Q Consensus 294 ~~dp~~Rps~~~il~~l~ 311 (484)
+.+|+.||++.+++..|+
T Consensus 235 ~~~p~~Rp~~~~l~~~l~ 252 (254)
T cd05083 235 ETEPKKRPSFHKLREKLE 252 (254)
T ss_pred CCChhhCcCHHHHHHHHc
Confidence 999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-40 Score=311.31 Aligned_cols=247 Identities=21% Similarity=0.331 Sum_probs=201.7
Q ss_pred CCcccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecC
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~ 135 (484)
..++.+.+.||.|+||.||++.+.+++.+|+|.+..... ....|.+|++++++++||||+++++++......++||||+
T Consensus 3 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (256)
T cd05112 3 PSELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM-SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFM 81 (256)
T ss_pred hhHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCC-CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcC
Confidence 346778888999999999999976778999999875432 3457999999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCC-----
Q 011519 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----- 210 (484)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~----- 210 (484)
++++|.+++.. ....+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++.......
T Consensus 82 ~~~~L~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~-~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~ 159 (256)
T cd05112 82 EHGCLSDYLRA-QRGKFSQETLLGMCLDVCEGMAYLESS-NVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSST 159 (256)
T ss_pred CCCcHHHHHHh-CccCCCHHHHHHHHHHHHHHHHHHHHC-CccccccccceEEEcCCCeEEECCCcceeecccCcccccC
Confidence 99999999864 234689999999999999999999998 99999999999999999999999999987653321
Q ss_pred cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHH
Q 011519 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289 (484)
Q Consensus 211 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 289 (484)
...++..|+|||++.++.++.++||||||+++|||++ |..|+............... .....+...+..+.+|+
T Consensus 160 ~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~ 234 (256)
T cd05112 160 GTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAG-----FRLYKPRLASQSVYELM 234 (256)
T ss_pred CCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCC-----CCCCCCCCCCHHHHHHH
Confidence 2234568999999998889999999999999999998 77776543222111111100 01111233457899999
Q ss_pred HHHhccCCCCCCChHHHHHHH
Q 011519 290 SRCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 290 ~~cl~~dp~~Rps~~~il~~l 310 (484)
.+||..+|++|||+.++++.|
T Consensus 235 ~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 235 QHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred HHHcccChhhCCCHHHHHHhh
Confidence 999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-40 Score=313.81 Aligned_cols=245 Identities=17% Similarity=0.233 Sum_probs=200.5
Q ss_pred ccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCc------cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEE
Q 011519 59 ENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP------DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (484)
Q Consensus 59 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 132 (484)
|.+.+.||.|+||+||+|...+++.+|||.+...... ....+.+|+++++.++|+||+++++++.+.+..++||
T Consensus 2 ~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 81 (265)
T cd06631 2 WTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFM 81 (265)
T ss_pred ccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEE
Confidence 5566778999999999999878899999998654321 1345889999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC----
Q 011519 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD---- 208 (484)
Q Consensus 133 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~---- 208 (484)
||+++++|.+++. +..++++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~ 158 (265)
T cd06631 82 EFVPGGSISSILN--RFGPLPEPVFCKYTKQILDGVAYLHNN-CVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLH 158 (265)
T ss_pred ecCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCcCHHhEEECCCCeEEeccchhhHhhhhcccc
Confidence 9999999999996 335689999999999999999999998 999999999999999999999999999875421
Q ss_pred ------CCcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHH
Q 011519 209 ------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG 282 (484)
Q Consensus 209 ------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (484)
.....++..|+|||++.+..++.++||||||+++|+|++|..||........... .. .........+...+
T Consensus 159 ~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~ 235 (265)
T cd06631 159 GTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFY-IG--AHRGLMPRLPDSFS 235 (265)
T ss_pred ccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHH-hh--hccCCCCCCCCCCC
Confidence 1234578899999999988899999999999999999999988754211100000 00 00001122345567
Q ss_pred HHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 283 TELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 283 ~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
..+.+++.+||..+|.+||++.+++.+
T Consensus 236 ~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 262 (265)
T cd06631 236 AAAIDFVTSCLTRDQHERPSALQLLRH 262 (265)
T ss_pred HHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 889999999999999999999999875
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-40 Score=314.09 Aligned_cols=246 Identities=15% Similarity=0.251 Sum_probs=205.3
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCC-ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecC
Q 011519 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~ 135 (484)
.|..++.||.|+||.||+|.. .++..||||.+..... .....+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence 466778899999999999995 5688999999875432 33567899999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----Cc
Q 011519 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RS 211 (484)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~----~~ 211 (484)
++|+|.+++. .+++++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++...... ..
T Consensus 85 ~~~~L~~~i~---~~~l~~~~~~~~~~~l~~~l~~lh~~-~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~ 160 (277)
T cd06640 85 GGGSALDLLR---AGPFDEFQIATMLKEILKGLDYLHSE-KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT 160 (277)
T ss_pred CCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC-CccCcCCChhhEEEcCCCCEEEcccccceeccCCcccccc
Confidence 9999999985 34689999999999999999999998 9999999999999999999999999998765432 23
Q ss_pred ccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHH
Q 011519 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291 (484)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 291 (484)
..++..|+|||++.+..++.++|+|||||++|+|+||..|+.......... ..........+...+..+.+++.+
T Consensus 161 ~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~li~~ 235 (277)
T cd06640 161 FVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLF-----LIPKNNPPTLTGEFSKPFKEFIDA 235 (277)
T ss_pred ccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhh-----hhhcCCCCCCchhhhHHHHHHHHH
Confidence 456788999999988889999999999999999999998875432111111 111111223445678889999999
Q ss_pred HhccCCCCCCChHHHHHHHHh
Q 011519 292 CLQYEPRERPNPRSLVTALVT 312 (484)
Q Consensus 292 cl~~dp~~Rps~~~il~~l~~ 312 (484)
||+.+|++||++.+++.+-.-
T Consensus 236 ~l~~~p~~Rp~~~~il~~~~~ 256 (277)
T cd06640 236 CLNKDPSFRPTAKELLKHKFI 256 (277)
T ss_pred HcccCcccCcCHHHHHhChHh
Confidence 999999999999999988543
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-40 Score=316.48 Aligned_cols=245 Identities=16% Similarity=0.270 Sum_probs=201.7
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCC-ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecC
Q 011519 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~ 135 (484)
.|.+++.||.|+||.||+|. ..+++.||||.+..... ...+.+.+|+.++++++||||+++++++...+..++||||+
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence 34566778999999999998 45688999999875432 23457889999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCC----c
Q 011519 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----S 211 (484)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~----~ 211 (484)
++++|.+++. ...+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++....... .
T Consensus 85 ~~~~L~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~-~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~ 160 (277)
T cd06642 85 GGGSALDLLK---PGPLEETYIATILREILKGLDYLHSE-RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT 160 (277)
T ss_pred CCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHhcC-CeeccCCChheEEEeCCCCEEEccccccccccCcchhhhc
Confidence 9999999984 35689999999999999999999998 99999999999999999999999999987654332 2
Q ss_pred ccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHH
Q 011519 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291 (484)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 291 (484)
..++..|+|||++.+..++.++||||||+++|||+||..|+.......... ..........+...+..+.+++.+
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~li~~ 235 (277)
T cd06642 161 FVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLF-----LIPKNSPPTLEGQYSKPFKEFVEA 235 (277)
T ss_pred ccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHh-----hhhcCCCCCCCcccCHHHHHHHHH
Confidence 357788999999998889999999999999999999998764321111110 011111112334456789999999
Q ss_pred HhccCCCCCCChHHHHHHHH
Q 011519 292 CLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 292 cl~~dp~~Rps~~~il~~l~ 311 (484)
||+.+|++|||+.+++.+-+
T Consensus 236 ~l~~~p~~Rp~~~~il~~~~ 255 (277)
T cd06642 236 CLNKDPRFRPTAKELLKHKF 255 (277)
T ss_pred HccCCcccCcCHHHHHHhHH
Confidence 99999999999999999844
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-40 Score=311.06 Aligned_cols=245 Identities=16% Similarity=0.206 Sum_probs=202.7
Q ss_pred cccccccCCCCCCceEEEEEeC-CCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCC
Q 011519 58 MENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~ 136 (484)
+|++.+.||.|+||.||+|... ++..|++|.+..... .+.+.+|+++++.++||||+++++.+......++++||++
T Consensus 4 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 81 (256)
T cd06612 4 VFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCG 81 (256)
T ss_pred cchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCC
Confidence 5677788899999999999954 488999999875432 6789999999999999999999999999999999999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----Ccc
Q 011519 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSY 212 (484)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~----~~~ 212 (484)
+++|.+++.. ....+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++...... ...
T Consensus 82 ~~~L~~~l~~-~~~~l~~~~~~~~~~~l~~~l~~lh~~-~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 159 (256)
T cd06612 82 AGSVSDIMKI-TNKTLTEEEIAAILYQTLKGLEYLHSN-KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTV 159 (256)
T ss_pred CCcHHHHHHh-CccCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCcceEEECCCCcEEEcccccchhcccCccccccc
Confidence 9999999854 345789999999999999999999998 9999999999999999999999999998875443 234
Q ss_pred cCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHH
Q 011519 213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRC 292 (484)
Q Consensus 213 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 292 (484)
.++..|+|||++.+..++.++||||||+++|+|++|+.|+.............. ........+...+..+.+++.+|
T Consensus 160 ~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~ 236 (256)
T cd06612 160 IGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPN---KPPPTLSDPEKWSPEFNDFVKKC 236 (256)
T ss_pred cCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhcc---CCCCCCCchhhcCHHHHHHHHHH
Confidence 578899999999888899999999999999999999988754321111100000 00011112334567899999999
Q ss_pred hccCCCCCCChHHHHHH
Q 011519 293 LQYEPRERPNPRSLVTA 309 (484)
Q Consensus 293 l~~dp~~Rps~~~il~~ 309 (484)
|+.||++|||+.+++.+
T Consensus 237 l~~~P~~Rps~~~il~~ 253 (256)
T cd06612 237 LVKDPEERPSAIQLLQH 253 (256)
T ss_pred HhcChhhCcCHHHHhcC
Confidence 99999999999999875
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-40 Score=312.73 Aligned_cols=236 Identities=25% Similarity=0.378 Sum_probs=190.0
Q ss_pred cCCCCCCceEEEEEeCC-C----------cEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEE
Q 011519 64 EHGEKAPNVVYKGKLEN-Q----------FRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (484)
Q Consensus 64 ~lG~G~~g~Vy~~~~~~-~----------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 132 (484)
.||+|+||.||+|...+ + ..|++|.+...... ...|.+|+.+++.++||||+++++++.. +..++||
T Consensus 2 ~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~ 79 (259)
T cd05037 2 HLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMVE 79 (259)
T ss_pred cccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEEE
Confidence 57999999999999543 3 25788887654432 5789999999999999999999999988 7789999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCC-------CceeeccCCccc
Q 011519 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV-------NPRLSCFGLMKN 205 (484)
Q Consensus 133 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~-------~~kl~DfG~a~~ 205 (484)
||+++|+|.+++... ...+++..+..++.||+.||.|||+. |++||||||+|||++.++ .+||+|||++..
T Consensus 80 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~-~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~ 157 (259)
T cd05037 80 EYVKFGPLDVFLHRE-KNNVSLHWKLDVAKQLASALHYLEDK-KLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPIT 157 (259)
T ss_pred EcCCCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHhhC-CeecccCccceEEEecCccccCCceeEEeCCCCcccc
Confidence 999999999999642 23689999999999999999999998 999999999999999887 799999999987
Q ss_pred cCCCCcccCCCCCCCcccccCC--CCCCCCceeehHHHHHHHhhCC-CCCCchhhHHhhhccccccccccccCCCChHHH
Q 011519 206 SRDGRSYSTNLAFTPPEYLRTG--RVTPESVMYSFGTLLLDLLSGK-HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG 282 (484)
Q Consensus 206 ~~~~~~~~~t~~y~aPE~~~~~--~~~~~~Dv~slG~~l~el~tg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (484)
........++..|+|||++.+. .++.++||||||+++|+|++|. .|+.......... ... . ....+....
T Consensus 158 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~-~~~---~---~~~~~~~~~ 230 (259)
T cd05037 158 VLSREERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKER-FYQ---D---QHRLPMPDC 230 (259)
T ss_pred cccccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHH-HHh---c---CCCCCCCCc
Confidence 6665556677889999999876 6899999999999999999964 4432221111100 000 0 011111223
Q ss_pred HHHHHHHHHHhccCCCCCCChHHHHHHH
Q 011519 283 TELVRLASRCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 283 ~~l~~li~~cl~~dp~~Rps~~~il~~l 310 (484)
..+.+++.+||..+|.+|||+.++++.|
T Consensus 231 ~~~~~li~~~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 231 AELANLINQCWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred hHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 7899999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-40 Score=311.22 Aligned_cols=246 Identities=18% Similarity=0.225 Sum_probs=186.9
Q ss_pred cCCCCCCceEEEEEeCCC---cEEEEEEecCCCC-ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCCCCC
Q 011519 64 EHGEKAPNVVYKGKLENQ---FRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT 139 (484)
Q Consensus 64 ~lG~G~~g~Vy~~~~~~~---~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~~gs 139 (484)
+||+|+||+||++...++ ..+++|.+..... ...+.|.+|+.+++.++||||+++++.+......++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 579999999999974332 3466777665432 235679999999999999999999999999999999999999999
Q ss_pred HHhhhccCC--CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC------CCc
Q 011519 140 LAKHLFHWE--TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD------GRS 211 (484)
Q Consensus 140 L~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~------~~~ 211 (484)
|.+++.... ...+++..+..++.||+.||.|||+. +++||||||+|||++.++.++|+|||++..... ...
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~-~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~ 160 (268)
T cd05086 82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH-NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDD 160 (268)
T ss_pred HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC-CeeccCCccceEEEcCCccEEecccccccccCcchhhhcccC
Confidence 999996432 23467778889999999999999998 999999999999999999999999999764221 233
Q ss_pred ccCCCCCCCcccccC-------CCCCCCCceeehHHHHHHHhhCCC-CCCchhhHHhhhccccccccccccCCCChHHHH
Q 011519 212 YSTNLAFTPPEYLRT-------GRVTPESVMYSFGTLLLDLLSGKH-IPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283 (484)
Q Consensus 212 ~~~t~~y~aPE~~~~-------~~~~~~~Dv~slG~~l~el~tg~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (484)
..++..|+|||++.. ..++.++||||||+++|||+++.. |+.........................+...++
T Consensus 161 ~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (268)
T cd05086 161 KCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYSE 240 (268)
T ss_pred CcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCCcH
Confidence 457789999999753 235789999999999999998654 443221111111111111111112223344567
Q ss_pred HHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 284 ELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 284 ~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
.+.+++..|| .+|++||++++|++.|.
T Consensus 241 ~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 241 RWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred HHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 8999999999 67999999999988763
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-40 Score=317.97 Aligned_cols=250 Identities=18% Similarity=0.221 Sum_probs=197.1
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCc--cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEec
Q 011519 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey 134 (484)
+|.+++.||.|+||.||+|+. .++..||||.++..... ..+.+.+|+.++++++||||+++++++..++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 367788899999999999995 57899999998654322 245788999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----
Q 011519 135 MPNDTLAKHLFHWE-TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 209 (484)
Q Consensus 135 ~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~---- 209 (484)
++ ++|.+++.... +..+++..+..++.||+.||.|||+. +++|+||||+||+++.++.++|+|||++......
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~-~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~ 158 (285)
T cd07861 81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR-RVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVY 158 (285)
T ss_pred CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhC-CeeecCCCHHHEEEcCCCcEEECcccceeecCCCcccc
Confidence 97 58998886433 35689999999999999999999998 9999999999999999999999999998754332
Q ss_pred CcccCCCCCCCcccccCC-CCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccc--------------------ccc
Q 011519 210 RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI--------------------QTL 268 (484)
Q Consensus 210 ~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~--------------------~~~ 268 (484)
....+++.|+|||++.+. .++.++||||||+++++|+||+.||............. ...
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (285)
T cd07861 159 THEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNT 238 (285)
T ss_pred cCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhh
Confidence 233557889999998754 47889999999999999999998876432111000000 000
Q ss_pred cccccc---CCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 269 TDSCLE---GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 269 ~~~~~~---~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
...... .......++++.+++.+||..||.+|||+.+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~ 282 (285)
T cd07861 239 FPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH 282 (285)
T ss_pred ccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 000000 00112356788999999999999999999999876
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-40 Score=313.62 Aligned_cols=252 Identities=19% Similarity=0.261 Sum_probs=204.5
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCc----EEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQF----RIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~----~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 130 (484)
.++++++.||+|+||+||+|.. .+|. .||+|.+...... ....+.+|+.++++++||||+++++++.. ...++
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~ 85 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL 85 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence 3567788899999999999984 3333 5899988765432 34678999999999999999999999887 78899
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCC
Q 011519 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR 210 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 210 (484)
||||+++|+|.+++... ...+++..+..++.||+.||.|||+. +++|+||||+||++++++.+||+|||+++......
T Consensus 86 v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~-~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~ 163 (279)
T cd05057 86 ITQLMPLGCLLDYVRNH-KDNIGSQYLLNWCVQIAKGMSYLEEK-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDE 163 (279)
T ss_pred EEecCCCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhC-CEEecccCcceEEEcCCCeEEECCCcccccccCcc
Confidence 99999999999999643 34589999999999999999999998 99999999999999999999999999998754332
Q ss_pred c------ccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHH
Q 011519 211 S------YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283 (484)
Q Consensus 211 ~------~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (484)
. ..++..|+|||.+....++.++|+||||+++||+++ |+.|+.......+...... ......+...+.
T Consensus 164 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 238 (279)
T cd05057 164 KEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEK-----GERLPQPPICTI 238 (279)
T ss_pred cceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhC-----CCCCCCCCCCCH
Confidence 1 122467999999988889999999999999999999 8888765433222211111 111122334567
Q ss_pred HHHHHHHHHhccCCCCCCChHHHHHHHHhhhcC
Q 011519 284 ELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316 (484)
Q Consensus 284 ~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 316 (484)
.+.+++.+||..||+.|||+.++++.|..+.+.
T Consensus 239 ~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05057 239 DVYMVLVKCWMIDAESRPTFKELINEFSKMARD 271 (279)
T ss_pred HHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhC
Confidence 899999999999999999999999999987654
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-40 Score=318.53 Aligned_cols=252 Identities=19% Similarity=0.298 Sum_probs=200.4
Q ss_pred cccccccCCCCCCceEEEEEe-CCCc----EEEEEEecCCCCcc-HHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEE
Q 011519 58 MENIVSEHGEKAPNVVYKGKL-ENQF----RIAVKRFNRSAWPD-ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~-~~~~----~vavK~~~~~~~~~-~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 131 (484)
++++++.||+|+||.||+|.. .++. .||+|.+....... ...+.+|+.+++.++||||+++++++... ..+++
T Consensus 8 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~v 86 (303)
T cd05110 8 ELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQLV 86 (303)
T ss_pred hceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cceee
Confidence 345667789999999999984 4443 57999887544322 34688999999999999999999998654 46799
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCC-
Q 011519 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR- 210 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~- 210 (484)
+||+++|+|.+++.. ....+++..++.++.|++.||.|||+. +++|+||||+||+++.++.+||+|||+++......
T Consensus 87 ~e~~~~g~l~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~-~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~ 164 (303)
T cd05110 87 TQLMPHGCLLDYVHE-HKDNIGSQLLLNWCVQIAKGMMYLEER-RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEK 164 (303)
T ss_pred ehhcCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHhhc-CeeccccccceeeecCCCceEEccccccccccCccc
Confidence 999999999999864 234689999999999999999999998 99999999999999999999999999998654321
Q ss_pred -----cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHH
Q 011519 211 -----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTE 284 (484)
Q Consensus 211 -----~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (484)
...++..|+|||++.+..++.++||||||+++|||++ |+.|+........... .........+...+..
T Consensus 165 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 239 (303)
T cd05110 165 EYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDL-----LEKGERLPQPPICTID 239 (303)
T ss_pred ccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-----HHCCCCCCCCCCCCHH
Confidence 2234678999999988889999999999999999997 7877754322211111 0010111122334578
Q ss_pred HHHHHHHHhccCCCCCCChHHHHHHHHhhhcCC
Q 011519 285 LVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (484)
Q Consensus 285 l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 317 (484)
+.+++..||..+|++||++.+++..|..+....
T Consensus 240 ~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~ 272 (303)
T cd05110 240 VYMVMVKCWMIDADSRPKFKELAAEFSRMARDP 272 (303)
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHHHHhch
Confidence 999999999999999999999999999887654
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-40 Score=310.84 Aligned_cols=246 Identities=18% Similarity=0.206 Sum_probs=203.8
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCc--cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEec
Q 011519 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey 134 (484)
+|++++.||.|+||.||++. ..++..+|||.+...... ..+.+.+|+.+++.++||||+++++.+...+..++||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 36677888999999999999 457889999998754322 356789999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCC-CCceeeccCCccccCCC---C
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD-VNPRLSCFGLMKNSRDG---R 210 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~-~~~kl~DfG~a~~~~~~---~ 210 (484)
+++++|.+++.......+++..+..++.|++.||.|||+. |++|+||||+||+++.+ +.+||+|||++...... .
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~-~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~ 159 (256)
T cd08220 81 APGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTK-LILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAY 159 (256)
T ss_pred CCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCcccc
Confidence 9999999999754455689999999999999999999998 99999999999999855 45899999998876543 2
Q ss_pred cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHH
Q 011519 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (484)
Q Consensus 211 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (484)
...++..|+|||.+.+..++.++||||||+++|+|++|+.|+............... .....+...+..+.+++.
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~ 234 (256)
T cd08220 160 TVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSG-----TFAPISDRYSPDLRQLIL 234 (256)
T ss_pred ccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhc-----CCCCCCCCcCHHHHHHHH
Confidence 356788999999999888899999999999999999999887654322221111111 111233446778999999
Q ss_pred HHhccCCCCCCChHHHHHH
Q 011519 291 RCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~ 309 (484)
+||..+|++|||+.+++.+
T Consensus 235 ~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 235 SMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred HHccCChhhCCCHHHHhhC
Confidence 9999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-40 Score=320.73 Aligned_cols=254 Identities=17% Similarity=0.243 Sum_probs=201.4
Q ss_pred CCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEE
Q 011519 55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (484)
Q Consensus 55 ~f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 132 (484)
.+..|.+++.||.|+||.||+|.. .+++.||+|.+...... ....+.+|+.+++.++||||+++++++...+..++||
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~ 83 (301)
T cd07873 4 KLETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVF 83 (301)
T ss_pred cccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEE
Confidence 456789999999999999999994 56889999998754322 2446789999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC---
Q 011519 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--- 209 (484)
Q Consensus 133 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~--- 209 (484)
||++ ++|.+++.. ....+++..+..++.||+.||.|||+. |++|+||||+||+++.++.++|+|||++......
T Consensus 84 e~~~-~~l~~~l~~-~~~~~~~~~~~~~~~qi~~aL~~lH~~-~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 160 (301)
T cd07873 84 EYLD-KDLKQYLDD-CGNSINMHNVKLFLFQLLRGLNYCHRR-KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKT 160 (301)
T ss_pred eccc-cCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCc
Confidence 9997 589998864 344689999999999999999999998 9999999999999999999999999998764322
Q ss_pred -CcccCCCCCCCcccccCC-CCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhc-----------ccccccc------
Q 011519 210 -RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR-----------NIQTLTD------ 270 (484)
Q Consensus 210 -~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~-----------~~~~~~~------ 270 (484)
....+++.|+|||++.+. .++.++|||||||++|+|+||+.||........... ....+..
T Consensus 161 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (301)
T cd07873 161 YSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKS 240 (301)
T ss_pred ccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccc
Confidence 234567899999998754 478899999999999999999988865422111000 0000000
Q ss_pred ---cccc----CCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 271 ---SCLE----GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 271 ---~~~~----~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
+... .......++.+.+||.+||..||.+|||+.++++|-+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~ 288 (301)
T cd07873 241 YNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPY 288 (301)
T ss_pred cccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcc
Confidence 0000 0011235678999999999999999999999998743
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-40 Score=324.55 Aligned_cols=244 Identities=13% Similarity=0.175 Sum_probs=191.7
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCC
Q 011519 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~ 136 (484)
.|.+++.||.|+||.||+|+. .++..||+|+.... ....|+.++++++||||+++++++...+..++||||+.
T Consensus 67 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 140 (357)
T PHA03209 67 GYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYS 140 (357)
T ss_pred CcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEccC
Confidence 578889999999999999995 46788999985432 23579999999999999999999999999999999995
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC---Cccc
Q 011519 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---RSYS 213 (484)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~---~~~~ 213 (484)
++|.+++.. ....+++..+..|+.||+.||.|||+. |||||||||+|||++.++.+||+|||+++..... ....
T Consensus 141 -~~l~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 217 (357)
T PHA03209 141 -SDLYTYLTK-RSRPLPIDQALIIEKQILEGLRYLHAQ-RIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAFLGLA 217 (357)
T ss_pred -CcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEECCCCCEEEecCccccccccCccccccc
Confidence 589998864 345799999999999999999999999 9999999999999999999999999998754322 3456
Q ss_pred CCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhh----HHhh--hccccc------cccccc--------
Q 011519 214 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL----DLIR--DRNIQT------LTDSCL-------- 273 (484)
Q Consensus 214 ~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~----~~~~--~~~~~~------~~~~~~-------- 273 (484)
||+.|+|||++.+..++.++|||||||++|||+++..++..... .... ...+.. ......
T Consensus 218 gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 297 (357)
T PHA03209 218 GTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRL 297 (357)
T ss_pred ccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHH
Confidence 89999999999988899999999999999999997655422100 0000 000000 000000
Q ss_pred -----------cCCC-------ChHHHHHHHHHHHHHhccCCCCCCChHHHHHHH
Q 011519 274 -----------EGQF-------SSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 274 -----------~~~~-------~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 310 (484)
...+ ....+.++.+||.+||+.||.+|||+.++++|-
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp 352 (357)
T PHA03209 298 VRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYP 352 (357)
T ss_pred HHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCc
Confidence 0000 012345677899999999999999999999883
|
|
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-40 Score=331.71 Aligned_cols=246 Identities=16% Similarity=0.189 Sum_probs=197.6
Q ss_pred cccccccCCCCCCceEEEEEeC---CCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEec
Q 011519 58 MENIVSEHGEKAPNVVYKGKLE---NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey 134 (484)
.|++++.||.|+||.||++... .+..||||.+... +.+.+|+.+|+.++||||+++++++......++|||+
T Consensus 93 ~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~ 167 (392)
T PHA03207 93 QYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPK 167 (392)
T ss_pred ceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehh
Confidence 5889999999999999999742 4678999998643 2456899999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-----
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----- 209 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~----- 209 (484)
+. ++|.+++. ....+++..++.++.||+.||.|||+. |||||||||+|||++.++.++|+|||+++.....
T Consensus 168 ~~-~~l~~~l~--~~~~l~~~~~~~i~~ql~~aL~~LH~~-givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~ 243 (392)
T PHA03207 168 YK-CDLFTYVD--RSGPLPLEQAITIQRRLLEALAYLHGR-GIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQ 243 (392)
T ss_pred cC-CCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEEcCCCCEEEccCccccccCccccccc
Confidence 95 58999884 456799999999999999999999999 9999999999999999999999999998765432
Q ss_pred -CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHH--------hhh--ccccccc---------
Q 011519 210 -RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDL--------IRD--RNIQTLT--------- 269 (484)
Q Consensus 210 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~--------~~~--~~~~~~~--------- 269 (484)
....||+.|+|||++.+..++.++|||||||++|||++|+.||....... ... .......
T Consensus 244 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~ 323 (392)
T PHA03207 244 CYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCK 323 (392)
T ss_pred ccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHH
Confidence 23568999999999998889999999999999999999999886432110 000 0000000
Q ss_pred -----cccccCC--CC-----hHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHh
Q 011519 270 -----DSCLEGQ--FS-----SDEGTELVRLASRCLQYEPRERPNPRSLVTALVT 312 (484)
Q Consensus 270 -----~~~~~~~--~~-----~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~ 312 (484)
....+.. .+ ...+.++.++|.+||..||++|||+.+++.+-+-
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f 378 (392)
T PHA03207 324 HFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLF 378 (392)
T ss_pred HHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchh
Confidence 0000000 01 1235678999999999999999999999999543
|
|
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-40 Score=314.81 Aligned_cols=253 Identities=19% Similarity=0.236 Sum_probs=203.3
Q ss_pred CcccccccCCCCCCceEEEEEeCC-----CcEEEEEEecCCCC-ccHHHHHHHHHHHhcCCCCceeeeeeeeee-CCceE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLEN-----QFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCE-GDERL 129 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~~~~~ 129 (484)
+.|.+.+.||+|+||.||+|.... +..|++|.+..... ...+.+.+|+.+++.++||||+++++++.. +...+
T Consensus 6 ~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~ 85 (280)
T cd05043 6 DRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPPF 85 (280)
T ss_pred hheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCCE
Confidence 345666778999999999999644 68899999875432 235668899999999999999999998766 56789
Q ss_pred EEEecCCCCCHHhhhccCCC------CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCc
Q 011519 130 LVAEYMPNDTLAKHLFHWET------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLM 203 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~~~~------~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a 203 (484)
+++||+++|+|.+++..... ..+++..++.++.||+.||.|||+. +++|+||||+||++++++.+||+|||++
T Consensus 86 ~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~-~i~H~di~p~nil~~~~~~~kl~d~g~~ 164 (280)
T cd05043 86 VLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR-GVIHKDIAARNCVIDEELQVKITDNALS 164 (280)
T ss_pred EEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC-CEeecccCHhhEEEcCCCcEEECCCCCc
Confidence 99999999999999864321 4689999999999999999999998 9999999999999999999999999999
Q ss_pred cccCCC------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCC
Q 011519 204 KNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQ 276 (484)
Q Consensus 204 ~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (484)
+..... ....++..|+|||++.+..++.++||||||+++||+++ |+.|+.......+...... .....
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~-----~~~~~ 239 (280)
T cd05043 165 RDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKD-----GYRLA 239 (280)
T ss_pred ccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHc-----CCCCC
Confidence 865332 12345678999999988889999999999999999999 8877754322211111111 01111
Q ss_pred CChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhc
Q 011519 277 FSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 315 (484)
Q Consensus 277 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~ 315 (484)
.+..+++.+.+++.+||..||++|||+.++++.|..+.+
T Consensus 240 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 240 QPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 223456789999999999999999999999999988754
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-40 Score=320.67 Aligned_cols=243 Identities=15% Similarity=0.228 Sum_probs=184.9
Q ss_pred ccCCCCCCceEEEEEeC---CCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeee--CCceEEEEecCCC
Q 011519 63 SEHGEKAPNVVYKGKLE---NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE--GDERLLVAEYMPN 137 (484)
Q Consensus 63 ~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~--~~~~~lv~Ey~~~ 137 (484)
.+||+|+||+||+|+.. +++.||||.+.... ....+.+|+.++++++||||+++++++.. ....++||||+.+
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~ 84 (317)
T cd07868 7 CKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH 84 (317)
T ss_pred cccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccCC
Confidence 57899999999999853 46789999997543 23457899999999999999999999854 4568999999954
Q ss_pred CCHHhhhccC-------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceee----cCCCCceeeccCCcccc
Q 011519 138 DTLAKHLFHW-------ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF----DDDVNPRLSCFGLMKNS 206 (484)
Q Consensus 138 gsL~~~l~~~-------~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill----~~~~~~kl~DfG~a~~~ 206 (484)
+|.+++... ....+++..+..++.||+.||.|||+. ||+||||||+|||+ +.++.+||+|||+++..
T Consensus 85 -~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~-~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~ 162 (317)
T cd07868 85 -DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN-WVLHRDLKPANILVMGEGPERGRVKIADMGFARLF 162 (317)
T ss_pred -CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC-CEEcCCCCHHHEEEecCCCCcCcEEEeecCceecc
Confidence 888887522 123589999999999999999999999 99999999999999 45678999999999765
Q ss_pred CCC-------CcccCCCCCCCcccccCC-CCCCCCceeehHHHHHHHhhCCCCCCchhhHH-------------hhh---
Q 011519 207 RDG-------RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDL-------------IRD--- 262 (484)
Q Consensus 207 ~~~-------~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~-------------~~~--- 262 (484)
... ....+|+.|+|||++.+. .++.++|||||||++|+|++|+.||.....+. +..
T Consensus 163 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (317)
T cd07868 163 NSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMG 242 (317)
T ss_pred CCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcC
Confidence 432 235678999999999874 58999999999999999999998875321100 000
Q ss_pred -------ccccccc------cccccCC------------CChHHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 263 -------RNIQTLT------DSCLEGQ------------FSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 263 -------~~~~~~~------~~~~~~~------------~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
....... ....... .....+..+.+|+.+||+.||.+|||++++++|
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~h 314 (317)
T cd07868 243 FPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD 314 (317)
T ss_pred CCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0000000 0000000 001123568899999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-40 Score=319.81 Aligned_cols=247 Identities=18% Similarity=0.169 Sum_probs=202.7
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCc---cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEe
Q 011519 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 133 (484)
+|++++.||.|+||+||+|.. .+++.||||.+...... ..+.+..|+++++.++||||+++++.+......++|||
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 81 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMD 81 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEE
Confidence 467778889999999999995 45899999999765433 34568899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----
Q 011519 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 209 (484)
Q Consensus 134 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~---- 209 (484)
|+.+++|.+++....+..+++..+..++.||+.||.|||+. |++|+||||+||+++.++.++|+|||++......
T Consensus 82 ~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~ 160 (316)
T cd05574 82 YCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLL-GIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPV 160 (316)
T ss_pred ecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHC-CeeccCCChHHeEEcCCCCEEEeecchhhccccccccc
Confidence 99999999999754556799999999999999999999998 9999999999999999999999999987653221
Q ss_pred -----------------------------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHh
Q 011519 210 -----------------------------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLI 260 (484)
Q Consensus 210 -----------------------------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~ 260 (484)
....||..|+|||++.+..++.++||||||+++|+|++|..||........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~ 240 (316)
T cd05574 161 SKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDET 240 (316)
T ss_pred ccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHH
Confidence 123567889999999988899999999999999999999998864432211
Q ss_pred hhccccccccccccCCCChHHHHHHHHHHHHHhccCCCCCCC----hHHHHHH
Q 011519 261 RDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPN----PRSLVTA 309 (484)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps----~~~il~~ 309 (484)
.... .............+..+.+++.+||..||++||| +.+++.+
T Consensus 241 ~~~~----~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~ 289 (316)
T cd05574 241 FSNI----LKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQH 289 (316)
T ss_pred HHHH----hcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcC
Confidence 1111 1111110111225788999999999999999999 8888876
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-41 Score=318.04 Aligned_cols=261 Identities=18% Similarity=0.231 Sum_probs=216.0
Q ss_pred ccCHHHHHHHh-cCCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCcc---HHHHHHHHHHHhcCCCCceee
Q 011519 43 EYSIETLRTAT-SGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD---ARQFLEEARAVGQLRNRRLAN 117 (484)
Q Consensus 43 ~~~~~~~~~~~-~~f~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~hpniv~ 117 (484)
.+.+-++...| +.|..|+++ |+|+||.||-++ ..+|+-+|.|++.+..... ....++|-.+|.+++.+.||.
T Consensus 173 QWK~lE~qpvt~n~F~~~Rvl---GkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVs 249 (591)
T KOG0986|consen 173 QWKWLELQPVTKNTFRVYRVL---GKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVS 249 (591)
T ss_pred HHHHHHhhhccccceeeeEEE---ecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEE
Confidence 34455555555 458888777 999999999999 5679999999986544322 345789999999999999999
Q ss_pred eeeeeeeCCceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCcee
Q 011519 118 LLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRL 197 (484)
Q Consensus 118 l~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl 197 (484)
+--.|.+.+.+++|+..|.||+|.-+|.+..+..|++..+..++.+|+.||++||+. +||+||+||+|||+|+.|+++|
T Consensus 250 laYAfeTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~-~iVYRDLKPeNILLDd~GhvRI 328 (591)
T KOG0986|consen 250 LAYAFETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRR-RIVYRDLKPENILLDDHGHVRI 328 (591)
T ss_pred EeeeecCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhc-ceeeccCChhheeeccCCCeEe
Confidence 999999999999999999999999999876767899999999999999999999999 9999999999999999999999
Q ss_pred eccCCccccCCCC---cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcccccccccccc
Q 011519 198 SCFGLMKNSRDGR---SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLE 274 (484)
Q Consensus 198 ~DfG~a~~~~~~~---~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 274 (484)
+|+|+|.....+. ..+||.+|||||++.++.|+...|.|||||++|||+.|+.||.......-.+..-+.... ..
T Consensus 329 SDLGLAvei~~g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~--~~ 406 (591)
T KOG0986|consen 329 SDLGLAVEIPEGKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLE--DP 406 (591)
T ss_pred eccceEEecCCCCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhc--ch
Confidence 9999999877654 347899999999999999999999999999999999999999765332222111111111 11
Q ss_pred CCCChHHHHHHHHHHHHHhccCCCCCCC-----hHHHHHH
Q 011519 275 GQFSSDEGTELVRLASRCLQYEPRERPN-----PRSLVTA 309 (484)
Q Consensus 275 ~~~~~~~~~~l~~li~~cl~~dp~~Rps-----~~~il~~ 309 (484)
..++...++++.+|....|.+||.+|.. +.++.+|
T Consensus 407 ~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~H 446 (591)
T KOG0986|consen 407 EEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEH 446 (591)
T ss_pred hhcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhC
Confidence 2466778899999999999999999964 4466555
|
|
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-40 Score=319.20 Aligned_cols=242 Identities=17% Similarity=0.235 Sum_probs=198.8
Q ss_pred cccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCCCCCH
Q 011519 62 VSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTL 140 (484)
Q Consensus 62 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~~gsL 140 (484)
...||.|+||.||++.. .++..||||.+........+.+.+|+.+++.++||||+++++.+..++..++||||+++++|
T Consensus 27 ~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L 106 (292)
T cd06658 27 FIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGAL 106 (292)
T ss_pred hhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcH
Confidence 35579999999999994 56889999998765544566789999999999999999999999999999999999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----CcccCCC
Q 011519 141 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSYSTNL 216 (484)
Q Consensus 141 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~----~~~~~t~ 216 (484)
.+++. .+.+++..+..++.||+.||.|||+. +++||||||+||+++.++.++|+|||++...... ....++.
T Consensus 107 ~~~~~---~~~l~~~~~~~~~~qi~~~l~~LH~~-~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~ 182 (292)
T cd06658 107 TDIVT---HTRMNEEQIATVCLSVLRALSYLHNQ-GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVGTP 182 (292)
T ss_pred HHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC-CEeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCceeecCc
Confidence 99884 34589999999999999999999998 9999999999999999999999999998754322 2346788
Q ss_pred CCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHHhccC
Q 011519 217 AFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYE 296 (484)
Q Consensus 217 ~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 296 (484)
.|+|||.+.+..++.++||||||+++|||++|..|+........... .......... .....+..+.+++..||..|
T Consensus 183 ~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~ 259 (292)
T cd06658 183 YWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRR-IRDNLPPRVK--DSHKVSSVLRGFLDLMLVRE 259 (292)
T ss_pred cccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HHhcCCCccc--cccccCHHHHHHHHHHccCC
Confidence 99999999888899999999999999999999998764322111111 1011111111 12234678999999999999
Q ss_pred CCCCCChHHHHHHH
Q 011519 297 PRERPNPRSLVTAL 310 (484)
Q Consensus 297 p~~Rps~~~il~~l 310 (484)
|.+|||+.+++++-
T Consensus 260 P~~Rpt~~~il~~~ 273 (292)
T cd06658 260 PSQRATAQELLQHP 273 (292)
T ss_pred hhHCcCHHHHhhCh
Confidence 99999999999873
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-40 Score=324.53 Aligned_cols=253 Identities=19% Similarity=0.269 Sum_probs=218.8
Q ss_pred hcCCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCcc--HHHHHHHHHHHhcCCCCceeeeeeeeeeCCceE
Q 011519 53 TSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129 (484)
Q Consensus 53 ~~~f~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 129 (484)
.+.+..|.+++.||+|.|++|.+++ ..++..||||.+.+..... ...+.+|+++|..|.|||||+++.+......+|
T Consensus 52 ~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~ly 131 (596)
T KOG0586|consen 52 SNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLY 131 (596)
T ss_pred cccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeE
Confidence 3456678899999999999999999 5679999999998765433 455899999999999999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC
Q 011519 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 209 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 209 (484)
+||||+.+|.+.++|. ..+.+.+..+..++.|+.+|++|||++ +|||||||.+||||+.+.++||+|||++..+...
T Consensus 132 lV~eya~~ge~~~yl~--~~gr~~e~~ar~~F~q~vsaveYcH~k-~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~ 208 (596)
T KOG0586|consen 132 LVMEYASGGELFDYLV--KHGRMKEKEARAKFRQIVSAVEYCHSK-NIVHRDLKAENILLDENMNIKIADFGFSTFFDYG 208 (596)
T ss_pred EEEEeccCchhHHHHH--hcccchhhhhhhhhHHHHHHHHHHhhc-ceeccccchhhcccccccceeeeccccceeeccc
Confidence 9999999999999997 455677799999999999999999999 9999999999999999999999999999877654
Q ss_pred ---CcccCCCCCCCcccccCCCC-CCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHH
Q 011519 210 ---RSYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 285 (484)
Q Consensus 210 ---~~~~~t~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 285 (484)
.+.+|++.|.|||++.+..+ ++.+|+||+|++||-|+.|..||.+......+.+.+.... .++-.++.++
T Consensus 209 ~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~------rIp~~ms~dc 282 (596)
T KOG0586|consen 209 LMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKY------RIPFYMSCDC 282 (596)
T ss_pred ccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeeee------cccceeechh
Confidence 57899999999999998775 7799999999999999999999887654444433332221 3455567899
Q ss_pred HHHHHHHhccCCCCCCChHHHHHHHHhhh
Q 011519 286 VRLASRCLQYEPRERPNPRSLVTALVTLQ 314 (484)
Q Consensus 286 ~~li~~cl~~dp~~Rps~~~il~~l~~~~ 314 (484)
.++|.++|..+|.+|++++++..+-|.-.
T Consensus 283 e~lLrk~lvl~Pskr~~~dqim~~~W~n~ 311 (596)
T KOG0586|consen 283 EDLLRKFLVLNPSKRGPCDQIMKDRWRND 311 (596)
T ss_pred HHHHHHhhccCccccCCHHHhhhhcccch
Confidence 99999999999999999999999866543
|
|
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-40 Score=320.43 Aligned_cols=245 Identities=24% Similarity=0.360 Sum_probs=207.7
Q ss_pred ccCCCCCCceEEEEEeC---CC--cEEEEEEecCCC-CccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCC
Q 011519 63 SEHGEKAPNVVYKGKLE---NQ--FRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (484)
Q Consensus 63 ~~lG~G~~g~Vy~~~~~---~~--~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~ 136 (484)
+.||.|-||.||+|+.- .| -.||||.-+.+. ..+.+.|+.|..+|+.++|||||+++|+|.+ ...|||||+++
T Consensus 395 r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~WivmEL~~ 473 (974)
T KOG4257|consen 395 RLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMWIVMELAP 473 (974)
T ss_pred HhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-cceeEEEeccc
Confidence 56799999999999932 23 458999887644 3346789999999999999999999999976 56899999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCCcccC--
Q 011519 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST-- 214 (484)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~-- 214 (484)
-|.|..||.. ++..++......++.||+.||.|||++ +.|||||-..|||+.+.-.|||+|||+++...+...+..
T Consensus 474 ~GELr~yLq~-nk~sL~l~tL~ly~~Qi~talaYLeSk-rfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYkaS~ 551 (974)
T KOG4257|consen 474 LGELREYLQQ-NKDSLPLRTLTLYCYQICTALAYLESK-RFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYKASR 551 (974)
T ss_pred chhHHHHHHh-ccccchHHHHHHHHHHHHHHHHHHHhh-chhhhhhhhhheeecCcceeeecccchhhhccccchhhccc
Confidence 9999999975 445689999999999999999999999 999999999999999999999999999999887644332
Q ss_pred ---CCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHH
Q 011519 215 ---NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (484)
Q Consensus 215 ---t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (484)
.+-|||||.+.-..++.+||||-|||++||++. |..||.+- .+......+...-+...|+.+++.+..|+.
T Consensus 552 ~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgv-----kNsDVI~~iEnGeRlP~P~nCPp~LYslms 626 (974)
T KOG4257|consen 552 GKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGV-----KNSDVIGHIENGERLPCPPNCPPALYSLMS 626 (974)
T ss_pred cccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccc-----cccceEEEecCCCCCCCCCCCChHHHHHHH
Confidence 356999999999999999999999999999876 66777642 334444444444455678889999999999
Q ss_pred HHhccCCCCCCChHHHHHHHHhhhc
Q 011519 291 RCLQYEPRERPNPRSLVTALVTLQK 315 (484)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~l~~~~~ 315 (484)
+||..+|.+||.+.++...|..+..
T Consensus 627 kcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 627 KCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred HHhccCcccCCcHHHHHHHHHHHHH
Confidence 9999999999999999988877654
|
|
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-41 Score=319.44 Aligned_cols=246 Identities=25% Similarity=0.385 Sum_probs=200.4
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCccHH--HHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecC
Q 011519 59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDAR--QFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 59 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~--~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~ 135 (484)
|++++.||+|+||+||++.. .+++.||+|++......... ...+|+.++++++||||+++++++......++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 56788999999999999995 55778999999876543322 3456999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCcccc----CCCCc
Q 011519 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS----RDGRS 211 (484)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~----~~~~~ 211 (484)
++++|.+++. ..+.+++..++.++.||+.||.+||+. +++|+||||+||+++.++.++|+|||.+... .....
T Consensus 81 ~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~Lh~~-~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 157 (260)
T PF00069_consen 81 PGGSLQDYLQ--KNKPLSEEEILKIAYQILEALAYLHSK-GIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNENFNP 157 (260)
T ss_dssp TTEBHHHHHH--HHSSBBHHHHHHHHHHHHHHHHHHHHT-TEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEBSS
T ss_pred cccccccccc--ccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccccc
Confidence 9999999996 456789999999999999999999998 9999999999999999999999999998752 22245
Q ss_pred ccCCCCCCCccccc-CCCCCCCCceeehHHHHHHHhhCCCCCCchh---h-HHhhhccccccccccccCCCChHHHHHHH
Q 011519 212 YSTNLAFTPPEYLR-TGRVTPESVMYSFGTLLLDLLSGKHIPPSHA---L-DLIRDRNIQTLTDSCLEGQFSSDEGTELV 286 (484)
Q Consensus 212 ~~~t~~y~aPE~~~-~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 286 (484)
..++..|+|||++. +...+.++||||||+++++|++|..|+.... . ............... .........+.
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~ 234 (260)
T PF00069_consen 158 FVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSS---QQSREKSEELR 234 (260)
T ss_dssp SSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHT---TSHTTSHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccc---cccchhHHHHH
Confidence 66788999999998 7789999999999999999999998877541 1 111111111111110 01111237899
Q ss_pred HHHHHHhccCCCCCCChHHHHHHH
Q 011519 287 RLASRCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 287 ~li~~cl~~dp~~Rps~~~il~~l 310 (484)
+++..||+.||++|||+.+++++-
T Consensus 235 ~li~~~l~~~p~~R~~~~~l~~~~ 258 (260)
T PF00069_consen 235 DLIKKMLSKDPEQRPSAEELLKHP 258 (260)
T ss_dssp HHHHHHSSSSGGGSTTHHHHHTSG
T ss_pred HHHHHHccCChhHCcCHHHHhcCC
Confidence 999999999999999999998763
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-41 Score=324.86 Aligned_cols=254 Identities=21% Similarity=0.343 Sum_probs=218.4
Q ss_pred cccCCCCCCceEEEEEeC-CCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCCCCCH
Q 011519 62 VSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTL 140 (484)
Q Consensus 62 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~~gsL 140 (484)
-.+||-|-||.||.|.|+ ..-.||||.++.+. ...+.|+.|+.+|+.++|||+|+|+|+|.....+|||+|||..|+|
T Consensus 272 khKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt-MeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~yGNL 350 (1157)
T KOG4278|consen 272 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCYGNL 350 (1157)
T ss_pred eeccCCCcccceeeeeeeccceeeehhhhhhcc-hhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccCccH
Confidence 367899999999999964 47789999998764 3578899999999999999999999999999999999999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCC--cccC---C
Q 011519 141 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR--SYST---N 215 (484)
Q Consensus 141 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~--~~~~---t 215 (484)
.+||++..+..++.-..+.++.||..|+.||..+ ++|||||-..|.|+.++..|||+|||++++....+ ...| .
T Consensus 351 LdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkk-nFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHAGAKFP 429 (1157)
T KOG4278|consen 351 LDYLRECNRSEVPAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHAGAKFP 429 (1157)
T ss_pred HHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHh-hhhhhhhhhhhccccccceEEeeccchhhhhcCCceecccCccCc
Confidence 9999877777788888899999999999999998 99999999999999999999999999999876543 2233 4
Q ss_pred CCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHHhc
Q 011519 216 LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ 294 (484)
Q Consensus 216 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 294 (484)
+-|.|||-+....++.|+|||+|||+|||+.| |..|+++.... ....+.....+..-|..+++.+.+|++.||+
T Consensus 430 IKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlS-----qVY~LLEkgyRM~~PeGCPpkVYeLMraCW~ 504 (1157)
T KOG4278|consen 430 IKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS-----QVYGLLEKGYRMDGPEGCPPKVYELMRACWN 504 (1157)
T ss_pred ccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHH-----HHHHHHhccccccCCCCCCHHHHHHHHHHhc
Confidence 67999999999999999999999999999998 66677764322 2223334444555678889999999999999
Q ss_pred cCCCCCCChHHHHHHHHhhhcCCCCCcc
Q 011519 295 YEPRERPNPRSLVTALVTLQKDTEVPSH 322 (484)
Q Consensus 295 ~dp~~Rps~~~il~~l~~~~~~~~~~~~ 322 (484)
++|.+||++.|+-+.|+.+-....+...
T Consensus 505 WsPsDRPsFaeiHqafEtmf~~sSisdE 532 (1157)
T KOG4278|consen 505 WSPSDRPSFAEIHQAFETMFSSSSISDE 532 (1157)
T ss_pred CCcccCccHHHHHHHHHHHhccccccHH
Confidence 9999999999999999988777665443
|
|
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-40 Score=316.35 Aligned_cols=244 Identities=19% Similarity=0.234 Sum_probs=204.0
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCC---ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEe
Q 011519 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 133 (484)
+|.+++.||.|+||.||++.. .+++.||||++..... ...+.+.+|++++++++||||+++++++...+..++|||
T Consensus 2 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 81 (290)
T cd05580 2 DFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVME 81 (290)
T ss_pred ceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEe
Confidence 567788899999999999994 5689999999865432 234568899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-Ccc
Q 011519 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-RSY 212 (484)
Q Consensus 134 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~-~~~ 212 (484)
|+++++|.+++.. ...+++..+..++.||+.||.|||+. |++|+||+|+|||++.++.+||+|||++...... ...
T Consensus 82 ~~~~~~L~~~~~~--~~~l~~~~~~~~~~qil~~l~~lH~~-~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~ 158 (290)
T cd05580 82 YVPGGELFSHLRK--SGRFPEPVARFYAAQVVLALEYLHSL-DIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRTYTL 158 (290)
T ss_pred cCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCCCHHHEEECCCCCEEEeeCCCccccCCCCCCC
Confidence 9999999999963 45789999999999999999999998 9999999999999999999999999998876543 344
Q ss_pred cCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHH
Q 011519 213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRC 292 (484)
Q Consensus 213 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 292 (484)
.+++.|+|||.+.+...+.++||||||+++|+|++|..|+............... ...++...+..+.+++.+|
T Consensus 159 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~li~~~ 232 (290)
T cd05580 159 CGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEG------KVRFPSFFSPDAKDLIRNL 232 (290)
T ss_pred CCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC------CccCCccCCHHHHHHHHHH
Confidence 6788999999998888899999999999999999999887654321111111110 1123445578899999999
Q ss_pred hccCCCCCC-----ChHHHHHHH
Q 011519 293 LQYEPRERP-----NPRSLVTAL 310 (484)
Q Consensus 293 l~~dp~~Rp-----s~~~il~~l 310 (484)
|..||.+|+ ++.++++|-
T Consensus 233 l~~~p~~R~~~~~~~~~~l~~~~ 255 (290)
T cd05580 233 LQVDLTKRLGNLKNGVNDIKNHP 255 (290)
T ss_pred ccCCHHHccCcccCCHHHHHcCc
Confidence 999999998 788888773
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-40 Score=312.09 Aligned_cols=248 Identities=19% Similarity=0.220 Sum_probs=197.9
Q ss_pred ccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCc----------cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCc
Q 011519 59 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP----------DARQFLEEARAVGQLRNRRLANLLGCCCEGDE 127 (484)
Q Consensus 59 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~----------~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~ 127 (484)
|.+.+.||.|+||.||+|. ..+++.||||.++..... ..+.+.+|+.+++.++||||+++++++...+.
T Consensus 3 ~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 82 (272)
T cd06629 3 WVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEY 82 (272)
T ss_pred eeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCc
Confidence 4556778999999999998 457889999988542111 12457889999999999999999999999999
Q ss_pred eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccC
Q 011519 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 207 (484)
Q Consensus 128 ~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~ 207 (484)
.++||||+++++|.+++.. .+.+++..+..++.||+.||.|||+. +++|+||+|+||+++.++.++|+|||++....
T Consensus 83 ~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~ 159 (272)
T cd06629 83 LSIFLEYVPGGSIGSCLRT--YGRFEEQLVRFFTEQVLEGLAYLHSK-GILHRDLKADNLLVDADGICKISDFGISKKSD 159 (272)
T ss_pred eEEEEecCCCCcHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHhhC-CeeecCCChhhEEEcCCCeEEEeecccccccc
Confidence 9999999999999999963 35789999999999999999999998 99999999999999999999999999987654
Q ss_pred CC------CcccCCCCCCCcccccCCC--CCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCCh
Q 011519 208 DG------RSYSTNLAFTPPEYLRTGR--VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSS 279 (484)
Q Consensus 208 ~~------~~~~~t~~y~aPE~~~~~~--~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (484)
.. ....++..|+|||.+.... ++.++|+||||++++++++|..|+...........................
T Consensus 160 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (272)
T cd06629 160 DIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSM 239 (272)
T ss_pred ccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCccccc
Confidence 32 2345788999999987654 789999999999999999999887533211110000000011111112223
Q ss_pred HHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 280 DEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 280 ~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
.++..+.+++.+||..+|++|||+.++++|
T Consensus 240 ~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 240 NLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred cCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 456889999999999999999999999987
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-40 Score=318.39 Aligned_cols=245 Identities=16% Similarity=0.221 Sum_probs=200.5
Q ss_pred ccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCCCCC
Q 011519 61 IVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT 139 (484)
Q Consensus 61 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~~gs 139 (484)
....||.|+||.||++.. .+++.||||.+........+.+.+|+.++..++||||+++++++..++..++||||+++++
T Consensus 25 ~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~ 104 (297)
T cd06659 25 NYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGA 104 (297)
T ss_pred hhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCC
Confidence 345679999999999994 5788999999976554456678899999999999999999999999999999999999999
Q ss_pred HHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----CcccCC
Q 011519 140 LAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSYSTN 215 (484)
Q Consensus 140 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~----~~~~~t 215 (484)
|.+++. ...+++..++.++.|++.||.|||+. +++|+||||+||+++.++.+||+|||++...... ....++
T Consensus 105 L~~~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~-~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~ 180 (297)
T cd06659 105 LTDIVS---QTRLNEEQIATVCESVLQALCYLHSQ-GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGT 180 (297)
T ss_pred HHHHHh---hcCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHeEEccCCcEEEeechhHhhcccccccccceecC
Confidence 999884 34689999999999999999999998 9999999999999999999999999998654322 345678
Q ss_pred CCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHHhcc
Q 011519 216 LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQY 295 (484)
Q Consensus 216 ~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 295 (484)
..|+|||++.+..++.++|||||||++|||++|+.||........... ....... ........+..+.+++.+||+.
T Consensus 181 ~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~l~~~i~~~l~~ 257 (297)
T cd06659 181 PYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKR-LRDSPPP--KLKNAHKISPVLRDFLERMLTR 257 (297)
T ss_pred ccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HhccCCC--CccccCCCCHHHHHHHHHHhcC
Confidence 999999999988899999999999999999999988754321111100 0000000 0111233457899999999999
Q ss_pred CCCCCCChHHHHHHHHh
Q 011519 296 EPRERPNPRSLVTALVT 312 (484)
Q Consensus 296 dp~~Rps~~~il~~l~~ 312 (484)
+|++||++.+++++-.-
T Consensus 258 ~P~~Rps~~~ll~~~~~ 274 (297)
T cd06659 258 EPQERATAQELLDHPFL 274 (297)
T ss_pred CcccCcCHHHHhhChhh
Confidence 99999999999998443
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-40 Score=315.00 Aligned_cols=249 Identities=20% Similarity=0.267 Sum_probs=198.5
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCC--ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEec
Q 011519 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey 134 (484)
.|++++.||.|+||.||+|.. .+++.||+|++..... ...+.+.+|+.+++.++||||+++++++......++||||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~ 81 (286)
T cd07847 2 KYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEY 81 (286)
T ss_pred ceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEec
Confidence 567888899999999999995 4689999999865432 2245688999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCC----
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---- 210 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~---- 210 (484)
+++++|..++. ....+++..+..++.||+.||.|||+. |++|+||||+||+++.++.++|+|||++.......
T Consensus 82 ~~~~~l~~~~~--~~~~~~~~~~~~~~~ql~~~l~~LH~~-~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 158 (286)
T cd07847 82 CDHTVLNELEK--NPRGVPEHLIKKIIWQTLQAVNFCHKH-NCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYT 158 (286)
T ss_pred cCccHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCChhhEEEcCCCcEEECccccceecCCCccccc
Confidence 99988888775 344689999999999999999999998 99999999999999999999999999988764432
Q ss_pred cccCCCCCCCcccccC-CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhh---cccc-----------------ccc
Q 011519 211 SYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD---RNIQ-----------------TLT 269 (484)
Q Consensus 211 ~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~---~~~~-----------------~~~ 269 (484)
...++..|+|||.+.+ ..++.++||||||+++|+|++|..||.......... .... ...
T Consensus 159 ~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (286)
T cd07847 159 DYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLS 238 (286)
T ss_pred CcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhccccccccccc
Confidence 3456789999999876 457899999999999999999998876432111000 0000 000
Q ss_pred cccccCC-----CChHHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 270 DSCLEGQ-----FSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 270 ~~~~~~~-----~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
.+..... .....+..+.+|+.+||+.+|++|||+.+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~ 283 (286)
T cd07847 239 IPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH 283 (286)
T ss_pred CCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence 0000000 012346789999999999999999999999876
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-39 Score=314.98 Aligned_cols=249 Identities=19% Similarity=0.219 Sum_probs=201.8
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCc---cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 132 (484)
..|.+++.||.|+||+||+|.. .+++.||+|++...... ..+.+.+|+.+++.++||||+++++++...+..++||
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 3467778899999999999994 57899999998654322 2456889999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCCcc
Q 011519 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY 212 (484)
Q Consensus 133 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 212 (484)
||++ |+|.+++.. ....+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++.........
T Consensus 95 e~~~-g~l~~~~~~-~~~~l~~~~~~~~~~ql~~~L~~LH~~-~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~~~ 171 (307)
T cd06607 95 EYCL-GSASDILEV-HKKPLQEVEIAAICHGALQGLAYLHSH-ERIHRDIKAGNILLTEPGTVKLADFGSASLVSPANSF 171 (307)
T ss_pred HhhC-CCHHHHHHH-cccCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCcccEEECCCCCEEEeecCcceecCCCCCc
Confidence 9996 578777753 234689999999999999999999998 9999999999999999999999999999877666677
Q ss_pred cCCCCCCCccccc---CCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHH
Q 011519 213 STNLAFTPPEYLR---TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289 (484)
Q Consensus 213 ~~t~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 289 (484)
.+++.|+|||++. ...++.++||||||+++|+|+||..|+............... ......+...+..+.+++
T Consensus 172 ~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~li 247 (307)
T cd06607 172 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN----DSPTLSSNDWSDYFRNFV 247 (307)
T ss_pred cCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcC----CCCCCCchhhCHHHHHHH
Confidence 7889999999885 355889999999999999999999887543211111000000 000111233567899999
Q ss_pred HHHhccCCCCCCChHHHHHHHHh
Q 011519 290 SRCLQYEPRERPNPRSLVTALVT 312 (484)
Q Consensus 290 ~~cl~~dp~~Rps~~~il~~l~~ 312 (484)
.+||..+|++||++.+++.+.+-
T Consensus 248 ~~~l~~~p~~Rp~~~~il~~~~~ 270 (307)
T cd06607 248 DSCLQKIPQDRPSSEELLKHRFV 270 (307)
T ss_pred HHHhcCChhhCcCHHHHhcChhh
Confidence 99999999999999999987543
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-40 Score=314.23 Aligned_cols=246 Identities=14% Similarity=0.201 Sum_probs=197.2
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCccHHHHHHHHHHHhcC-CCCceeeeeeeeee------CCceE
Q 011519 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCE------GDERL 129 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~------~~~~~ 129 (484)
.|++++.||.|+||.||+|.. .+++.||+|++.... .....+..|+.++.++ +||||+++++++.. ....+
T Consensus 17 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~ 95 (282)
T cd06636 17 IFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLW 95 (282)
T ss_pred hhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEEE
Confidence 456677789999999999994 678899999986543 2345688999999998 69999999999853 45689
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC-
Q 011519 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD- 208 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~- 208 (484)
+||||+++|+|.+++.......+++..+..++.||+.||.|||+. +++|+||||+||++++++.++|+|||++.....
T Consensus 96 iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~-~ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~~ 174 (282)
T cd06636 96 LVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAH-KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT 174 (282)
T ss_pred EEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCCCEEEeeCcchhhhhcc
Confidence 999999999999999765566789999999999999999999998 999999999999999999999999999875432
Q ss_pred ---CCcccCCCCCCCccccc-----CCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChH
Q 011519 209 ---GRSYSTNLAFTPPEYLR-----TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD 280 (484)
Q Consensus 209 ---~~~~~~t~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (484)
.....+++.|+|||.+. +..++.++|||||||++|+|++|..||......... ...............
T Consensus 175 ~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~----~~~~~~~~~~~~~~~ 250 (282)
T cd06636 175 VGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRAL----FLIPRNPPPKLKSKK 250 (282)
T ss_pred ccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhh----hhHhhCCCCCCcccc
Confidence 23456788999999986 345788999999999999999999887543211110 001111111112234
Q ss_pred HHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 281 EGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 281 ~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
.+..+.+|+.+||+.||.+|||+.+++++
T Consensus 251 ~~~~~~~li~~cl~~~p~~Rp~~~ell~~ 279 (282)
T cd06636 251 WSKKFIDFIEGCLVKNYLSRPSTEQLLKH 279 (282)
T ss_pred cCHHHHHHHHHHhCCChhhCcCHHHHhcC
Confidence 56789999999999999999999999875
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-40 Score=337.49 Aligned_cols=252 Identities=17% Similarity=0.189 Sum_probs=190.8
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCC------CceeeeeeeeeeC-Cce
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRN------RRLANLLGCCCEG-DER 128 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h------pniv~l~~~~~~~-~~~ 128 (484)
..|++++.||+|+||+||+|.. .+++.||||+++... ...+.+..|+.++..++| ++++++++++... .+.
T Consensus 129 ~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~ 207 (467)
T PTZ00284 129 QRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHM 207 (467)
T ss_pred CcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceE
Confidence 4578888999999999999994 568899999996432 123345667777766654 4588899888754 578
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCC---------------
Q 011519 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV--------------- 193 (484)
Q Consensus 129 ~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~--------------- 193 (484)
+||||++ |++|.+++. ..+.+++..+..|+.||+.||.|||++.|||||||||+|||++.++
T Consensus 208 ~iv~~~~-g~~l~~~l~--~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~ 284 (467)
T PTZ00284 208 CIVMPKY-GPCLLDWIM--KHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDP 284 (467)
T ss_pred EEEEecc-CCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCC
Confidence 9999998 779999886 3457999999999999999999999733999999999999998665
Q ss_pred -CceeeccCCccccCC-CCcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhh---cccc--
Q 011519 194 -NPRLSCFGLMKNSRD-GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD---RNIQ-- 266 (484)
Q Consensus 194 -~~kl~DfG~a~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~---~~~~-- 266 (484)
.+||+|||++..... .....||+.|+|||++.+..++.++|||||||++|||+||+.||.......... ....
T Consensus 285 ~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~ 364 (467)
T PTZ00284 285 CRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRL 364 (467)
T ss_pred ceEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCC
Confidence 499999998765433 345678999999999999999999999999999999999999886432110000 0000
Q ss_pred --------------cccc------cccc---------CC-C-ChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHh
Q 011519 267 --------------TLTD------SCLE---------GQ-F-SSDEGTELVRLASRCLQYEPRERPNPRSLVTALVT 312 (484)
Q Consensus 267 --------------~~~~------~~~~---------~~-~-~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~ 312 (484)
.+.. +... .. . .....+.+.+||.+||..||.+|||+.++++|-+-
T Consensus 365 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~ 441 (467)
T PTZ00284 365 PSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYV 441 (467)
T ss_pred CHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCccc
Confidence 0000 0000 00 0 00124568899999999999999999999998543
|
|
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-40 Score=310.40 Aligned_cols=244 Identities=16% Similarity=0.178 Sum_probs=196.7
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCC-----ccHHHHHHHHHHHhcCCCCceeeeeeeeeeC--CceE
Q 011519 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW-----PDARQFLEEARAVGQLRNRRLANLLGCCCEG--DERL 129 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~--~~~~ 129 (484)
+|.+.+.||+|+||.||+|. ..+++.||||.+..... ...+.+.+|+.++++++||||+++++++.+. ..++
T Consensus 3 ~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (265)
T cd06652 3 NWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLS 82 (265)
T ss_pred cceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEE
Confidence 45666778999999999999 45689999998853221 1245688999999999999999999998764 4578
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC-
Q 011519 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD- 208 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~- 208 (484)
+||||+++++|.+++.. ...+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++.....
T Consensus 83 ~v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~l~~~l~~lH~~-~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~ 159 (265)
T cd06652 83 IFMEHMPGGSIKDQLKS--YGALTENVTRKYTRQILEGVSYLHSN-MIVHRDIKGANILRDSVGNVKLGDFGASKRLQTI 159 (265)
T ss_pred EEEEecCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEecCCCCEEECcCccccccccc
Confidence 99999999999999863 34588999999999999999999998 999999999999999999999999999875432
Q ss_pred ------CCcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHH
Q 011519 209 ------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG 282 (484)
Q Consensus 209 ------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (484)
.....++..|+|||++.+..++.++||||||+++|+|++|+.||.......... ...........+...+
T Consensus 160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 235 (265)
T cd06652 160 CLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIF----KIATQPTNPVLPPHVS 235 (265)
T ss_pred cccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHH----HHhcCCCCCCCchhhC
Confidence 223457889999999988889999999999999999999998875431111111 1111111223455667
Q ss_pred HHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 283 TELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 283 ~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
..+.+++.+||. +|++||++++++.+
T Consensus 236 ~~~~~~i~~~l~-~p~~Rp~~~~il~~ 261 (265)
T cd06652 236 DHCRDFLKRIFV-EAKLRPSADELLRH 261 (265)
T ss_pred HHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence 889999999994 99999999999876
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=312.83 Aligned_cols=249 Identities=14% Similarity=0.154 Sum_probs=196.3
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCccHHHHHHHHHHHhcC-CCCceeeeeeeee-----eCCceE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCC-----EGDERL 129 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~-----~~~~~~ 129 (484)
.+|++++.||+|+||.||++.. .+++.+|+|++.... .....+.+|+.+++.+ +||||+++++++. .++..+
T Consensus 18 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~ 96 (286)
T cd06638 18 DTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLW 96 (286)
T ss_pred cceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEE
Confidence 4557888899999999999994 568899999986532 2235688899999999 6999999999874 345689
Q ss_pred EEEecCCCCCHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccC
Q 011519 130 LVAEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 207 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~ 207 (484)
+||||+++++|.+++... ....+++..+..++.|++.||.|||+. +++||||||+||+++.++.++|+|||++....
T Consensus 97 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~ 175 (286)
T cd06638 97 LVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN-KTIHRDVKGNNILLTTEGGVKLVDFGVSAQLT 175 (286)
T ss_pred EEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC-CccccCCCHHhEEECCCCCEEEccCCceeecc
Confidence 999999999999987531 345689999999999999999999998 99999999999999999999999999987654
Q ss_pred CC----CcccCCCCCCCcccccC-----CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCC
Q 011519 208 DG----RSYSTNLAFTPPEYLRT-----GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFS 278 (484)
Q Consensus 208 ~~----~~~~~t~~y~aPE~~~~-----~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (484)
.. ....|++.|+|||++.. ..++.++|||||||++|+|++|+.|+............... ... ....+
T Consensus 176 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~-~~~--~~~~~ 252 (286)
T cd06638 176 STRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRN-PPP--TLHQP 252 (286)
T ss_pred cCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhcccc-CCC--cccCC
Confidence 32 23468899999999853 44788999999999999999999887543211110000000 000 00112
Q ss_pred hHHHHHHHHHHHHHhccCCCCCCChHHHHHHH
Q 011519 279 SDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 279 ~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 310 (484)
...+..+.+|+.+||+.||++|||+.++++++
T Consensus 253 ~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 253 ELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred CCcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 33456899999999999999999999999875
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=310.80 Aligned_cols=250 Identities=20% Similarity=0.307 Sum_probs=200.4
Q ss_pred CcccccccCCCCCCceEEEEEeC------CCcEEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 129 (484)
..+.++..||.|+||+||+|+.. +...|++|.+...... ....+.+|+.++++++||||+++++++.+.+..+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 35667888899999999999843 2467999998765433 3567999999999999999999999999989999
Q ss_pred EEEecCCCCCHHhhhccCCC-------CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCC
Q 011519 130 LVAEYMPNDTLAKHLFHWET-------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGL 202 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~~~~-------~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~ 202 (484)
+||||+++|+|.+++..... ..+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||+
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~-~i~H~dlkp~Nili~~~~~~~l~~~~~ 163 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA-RFVHRDLAARNCLVSSQREVKVSLLSL 163 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc-CcccCcCccceEEEeCCCcEEEccccc
Confidence 99999999999999974331 2689999999999999999999998 999999999999999999999999999
Q ss_pred ccccCCC-----CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCC
Q 011519 203 MKNSRDG-----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQ 276 (484)
Q Consensus 203 a~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (484)
+...... ....+++.|+|||.+.+...+.++||||||+++|+|++ |..||.............. ......
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~----~~~~~~ 239 (275)
T cd05046 164 SKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQA----GKLELP 239 (275)
T ss_pred ccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHc----CCcCCC
Confidence 8654321 22345677999999988888999999999999999999 5656543221111111110 011111
Q ss_pred CChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 277 FSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 277 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
.+..++..+.+++.+||+.+|.+|||+.+++..|.
T Consensus 240 ~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 240 VPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 23345678999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-40 Score=316.02 Aligned_cols=248 Identities=18% Similarity=0.239 Sum_probs=204.6
Q ss_pred CCcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEec
Q 011519 56 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey 134 (484)
..+|.+++.||.|+||.||++. ..++..||+|.+........+.+.+|+.+++.++||||+++++.+...+..++|+||
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~ 97 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEY 97 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEec
Confidence 4577888999999999999998 457889999998765544566789999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----C
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----R 210 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~----~ 210 (484)
+++++|.+++. ...+++..+..++.|++.||.|||+. |++|+||||+||+++.++.++|+|||++...... .
T Consensus 98 ~~~~~L~~~~~---~~~l~~~~~~~i~~~l~~al~~LH~~-gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~~ 173 (293)
T cd06647 98 LAGGSLTDVVT---ETCMDEGQIAAVCRECLQALEFLHSN-QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS 173 (293)
T ss_pred CCCCcHHHHHh---hcCCCHHHHHHHHHHHHHHHHHHHhC-CEeeccCCHHHEEEcCCCCEEEccCcceecccccccccc
Confidence 99999999985 34588999999999999999999999 9999999999999999999999999987654432 2
Q ss_pred cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHH
Q 011519 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (484)
Q Consensus 211 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (484)
...+++.|++||.+.+..++.++||||||+++|++++|..||.......... ............+...+..+.+++.
T Consensus 174 ~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~li~ 250 (293)
T cd06647 174 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY---LIATNGTPELQNPEKLSAIFRDFLN 250 (293)
T ss_pred cccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhhee---ehhcCCCCCCCCccccCHHHHHHHH
Confidence 3457788999999988889999999999999999999998886542211100 0000001111123345678999999
Q ss_pred HHhccCCCCCCChHHHHHHH
Q 011519 291 RCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~l 310 (484)
+||..+|++||++.+++.|-
T Consensus 251 ~~l~~~p~~Rp~~~~il~h~ 270 (293)
T cd06647 251 RCLEMDVEKRGSAKELLQHP 270 (293)
T ss_pred HHccCChhhCcCHHHHhcCH
Confidence 99999999999999999883
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-40 Score=310.38 Aligned_cols=243 Identities=18% Similarity=0.216 Sum_probs=195.0
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCC-----ccHHHHHHHHHHHhcCCCCceeeeeeeeee--CCceEE
Q 011519 59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-----PDARQFLEEARAVGQLRNRRLANLLGCCCE--GDERLL 130 (484)
Q Consensus 59 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~--~~~~~l 130 (484)
|.+.+.||+|+||.||+|.. .+++.|++|.+..... .....+.+|+.+++.++||||+++++++.+ ....++
T Consensus 4 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 83 (266)
T cd06651 4 WRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTI 83 (266)
T ss_pred ccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEE
Confidence 34556679999999999994 5688999999864322 123468899999999999999999998865 356889
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-
Q 011519 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 209 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~- 209 (484)
++||+++++|.+++. ....+++...+.++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++......
T Consensus 84 ~~e~~~~~~L~~~l~--~~~~l~~~~~~~~~~qi~~~l~~LH~~-~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~ 160 (266)
T cd06651 84 FMEYMPGGSVKDQLK--AYGALTESVTRKYTRQILEGMSYLHSN-MIVHRDIKGANILRDSAGNVKLGDFGASKRLQTIC 160 (266)
T ss_pred EEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCCHHHEEECCCCCEEEccCCCcccccccc
Confidence 999999999999996 344689999999999999999999998 9999999999999999999999999998754321
Q ss_pred ------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHH
Q 011519 210 ------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283 (484)
Q Consensus 210 ------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (484)
....++..|+|||++.+..++.++|||||||++|+|++|+.||.......... ..........++...++
T Consensus 161 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 236 (266)
T cd06651 161 MSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIF----KIATQPTNPQLPSHISE 236 (266)
T ss_pred ccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHH----HHhcCCCCCCCchhcCH
Confidence 22457889999999998889999999999999999999998875432111110 11111112334555667
Q ss_pred HHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 284 ELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 284 ~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
.+.+++ .||..+|++||++.+|+.|
T Consensus 237 ~~~~li-~~~~~~p~~Rp~~~eil~h 261 (266)
T cd06651 237 HARDFL-GCIFVEARHRPSAEELLRH 261 (266)
T ss_pred HHHHHH-HHhcCChhhCcCHHHHhcC
Confidence 788888 6888999999999999886
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-39 Score=310.34 Aligned_cols=252 Identities=21% Similarity=0.281 Sum_probs=202.1
Q ss_pred CcccccccCCCCCCceEEEEEeCC----CcEEEEEEecCCCC-ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLEN----QFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 131 (484)
..+.+.+.||.|+||.||+|...+ ...|+||....... ...+.+.+|+.+++.++||||+++++++.. +..++|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv 84 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIV 84 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEE
Confidence 345677888999999999998432 35699999876542 335679999999999999999999998865 567899
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCC-
Q 011519 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR- 210 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~- 210 (484)
|||+++|+|.+++... ...+++..++.++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++.......
T Consensus 85 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~-~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~ 162 (270)
T cd05056 85 MELAPLGELRSYLQVN-KYSLDLASLILYSYQLSTALAYLESK-RFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESY 162 (270)
T ss_pred EEcCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccccChheEEEecCCCeEEccCceeeecccccc
Confidence 9999999999999642 34589999999999999999999998 99999999999999999999999999987654332
Q ss_pred ----cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHHH
Q 011519 211 ----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 285 (484)
Q Consensus 211 ----~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 285 (484)
...+++.|+|||.+....++.++||||||+++|+|++ |..||.............. ......+...+..+
T Consensus 163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 237 (270)
T cd05056 163 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIEN-----GERLPMPPNCPPTL 237 (270)
T ss_pred eecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHc-----CCcCCCCCCCCHHH
Confidence 2223467999999988889999999999999999986 8888754432211111100 00112344556789
Q ss_pred HHHHHHHhccCCCCCCChHHHHHHHHhhhcC
Q 011519 286 VRLASRCLQYEPRERPNPRSLVTALVTLQKD 316 (484)
Q Consensus 286 ~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 316 (484)
.+++.+||..+|++|||+.+++..|..+...
T Consensus 238 ~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 238 YSLMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred HHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 9999999999999999999999999887654
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-40 Score=315.96 Aligned_cols=252 Identities=17% Similarity=0.207 Sum_probs=196.9
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCc-cHHHHHHHHHHHhcCC-CCceeeeeeeeeeCCceEEEEec
Q 011519 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVAEY 134 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~lv~Ey 134 (484)
++..++.||+|+||.||++. ..+++.||||.+...... ....+.+|+.++.++. ||||+++++++...+..+++|||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~ 84 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL 84 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence 34456778999999999999 456899999998754332 3557889999999996 99999999999999999999999
Q ss_pred CCCCCHHhhh---ccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC--
Q 011519 135 MPNDTLAKHL---FHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 209 (484)
Q Consensus 135 ~~~gsL~~~l---~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~-- 209 (484)
+.. +|.++. .......+++..+..++.|++.||+|||+..+++||||||+||+++.++.++|+|||++......
T Consensus 85 ~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~ 163 (288)
T cd06616 85 MDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIA 163 (288)
T ss_pred ccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhccCCc
Confidence 864 665543 22234679999999999999999999997548999999999999999999999999998764332
Q ss_pred -CcccCCCCCCCcccccCC---CCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHH
Q 011519 210 -RSYSTNLAFTPPEYLRTG---RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 285 (484)
Q Consensus 210 -~~~~~t~~y~aPE~~~~~---~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 285 (484)
....+++.|+|||++.+. .++.++|||||||++|+|++|+.||..................+......+..++..+
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 243 (288)
T cd06616 164 KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFSPSF 243 (288)
T ss_pred cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCCccCHHH
Confidence 334678899999999876 5899999999999999999999887643211000000000011111122223467889
Q ss_pred HHHHHHHhccCCCCCCChHHHHHHH
Q 011519 286 VRLASRCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 286 ~~li~~cl~~dp~~Rps~~~il~~l 310 (484)
.+|+.+||+.||++|||+.+|+.+-
T Consensus 244 ~~li~~~l~~~p~~Rpt~~~i~~~~ 268 (288)
T cd06616 244 VNFINLCLIKDESKRPKYKELLEHP 268 (288)
T ss_pred HHHHHHHccCChhhCcCHHHHhcCh
Confidence 9999999999999999999999883
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-40 Score=310.40 Aligned_cols=242 Identities=22% Similarity=0.342 Sum_probs=195.5
Q ss_pred cCCCCCCceEEEEEeCC-------CcEEEEEEecCCCC-ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecC
Q 011519 64 EHGEKAPNVVYKGKLEN-------QFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 64 ~lG~G~~g~Vy~~~~~~-------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~ 135 (484)
.||.|+||.||+|+..+ +..||||.+..... .....+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELM 81 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEecc
Confidence 46999999999998532 25799999865432 23567899999999999999999999999989999999999
Q ss_pred CCCCHHhhhccC-----CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCC-----CceeeccCCccc
Q 011519 136 PNDTLAKHLFHW-----ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV-----NPRLSCFGLMKN 205 (484)
Q Consensus 136 ~~gsL~~~l~~~-----~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~-----~~kl~DfG~a~~ 205 (484)
++++|.+++... ....+++..++.++.|++.||.|||+. +++|+||||+||+++.++ .++|+|||++..
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~-~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~ 160 (269)
T cd05044 82 EGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM-HFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARD 160 (269)
T ss_pred CCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC-CcccCCCChheEEEecCCCCCCcceEECCcccccc
Confidence 999999999642 223478999999999999999999998 999999999999999877 899999999875
Q ss_pred cCCC------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCC
Q 011519 206 SRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFS 278 (484)
Q Consensus 206 ~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (484)
.... ....++..|+|||++.++.++.++|||||||++|+|+| |..||............ ........+
T Consensus 161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~-----~~~~~~~~~ 235 (269)
T cd05044 161 IYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHV-----TAGGRLQKP 235 (269)
T ss_pred cccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHH-----hcCCccCCc
Confidence 4322 12234678999999998889999999999999999998 88777543221111110 011111234
Q ss_pred hHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 279 SDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 279 ~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
...+..+.+++.+||..+|.+||++.++++.|.
T Consensus 236 ~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 236 ENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred ccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 456788999999999999999999999999875
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-39 Score=315.95 Aligned_cols=247 Identities=17% Similarity=0.139 Sum_probs=197.9
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCC---ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEe
Q 011519 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 133 (484)
.|++++.||+|+||.||++.. .+++.|+||.+..... .....+.+|+.+++.++||||+++++.+..++..++|||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVME 81 (305)
T ss_pred CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEe
Confidence 467788889999999999994 5688999999876532 224568899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC-----
Q 011519 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----- 208 (484)
Q Consensus 134 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~----- 208 (484)
|++|++|.+++.. .+.+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||+++....
T Consensus 82 ~~~g~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~ 158 (305)
T cd05609 82 YVEGGDCATLLKN--IGALPVDMARMYFAETVLALEYLHNY-GIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTN 158 (305)
T ss_pred cCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCchHHEEECCCCCEEEeeCCCccccCcCcccc
Confidence 9999999999963 35689999999999999999999998 999999999999999999999999998864210
Q ss_pred --------------CCcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcccccccccccc
Q 011519 209 --------------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLE 274 (484)
Q Consensus 209 --------------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 274 (484)
.....++..|+|||.+.+..++.++|+||||+++|||++|..||.+.................
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~--- 235 (305)
T cd05609 159 LYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEW--- 235 (305)
T ss_pred ccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCC---
Confidence 012346788999999988889999999999999999999999887543322222111111000
Q ss_pred CCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHH
Q 011519 275 GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 275 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 310 (484)
.......+.++.+++.+||+.||++||+..++.+.|
T Consensus 236 ~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll 271 (305)
T cd05609 236 PEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVK 271 (305)
T ss_pred CCccccCCHHHHHHHHHHhccChhhccCccCHHHHH
Confidence 011123567899999999999999999854444433
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-40 Score=316.67 Aligned_cols=248 Identities=18% Similarity=0.208 Sum_probs=195.3
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCc--cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecC
Q 011519 59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 59 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~ 135 (484)
|.+++.||.|+||.||+|+. .+|+.||+|.++..... ....+.+|+.++++++||||+++++++.+....++|+||+
T Consensus 2 y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 81 (284)
T cd07839 2 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYC 81 (284)
T ss_pred ceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecC
Confidence 56778899999999999994 57899999998654322 2346788999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----Cc
Q 011519 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RS 211 (484)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~----~~ 211 (484)
++ +|.+++.. ....+++..++.++.||+.||.|||+. +++|+||||+||+++.++.+||+|||++...... ..
T Consensus 82 ~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~al~~LH~~-~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~ 158 (284)
T cd07839 82 DQ-DLKKYFDS-CNGDIDPEIVKSFMFQLLKGLAFCHSH-NVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYSA 158 (284)
T ss_pred CC-CHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCcCC
Confidence 64 88888754 245689999999999999999999999 9999999999999999999999999998765432 23
Q ss_pred ccCCCCCCCcccccCCC-CCCCCceeehHHHHHHHhhCCCCCCchh-hHHhhhc--------------ccccccccccc-
Q 011519 212 YSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHA-LDLIRDR--------------NIQTLTDSCLE- 274 (484)
Q Consensus 212 ~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~tg~~p~~~~~-~~~~~~~--------------~~~~~~~~~~~- 274 (484)
..+++.|+|||++.+.. ++.++|||||||++|+|+||+.|+.... ....... ...........
T Consensus 159 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (284)
T cd07839 159 EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYP 238 (284)
T ss_pred CccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccC
Confidence 45678999999987654 6899999999999999999998753211 1000000 00000000000
Q ss_pred --------CCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 275 --------GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 275 --------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
....+..++++.+++.+||+.||.+|||+.+++.|
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h 281 (284)
T cd07839 239 MYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQH 281 (284)
T ss_pred CCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcC
Confidence 01112356789999999999999999999999886
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=309.54 Aligned_cols=251 Identities=15% Similarity=0.147 Sum_probs=196.7
Q ss_pred HHHHHhcCCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCccHHHHHHHHHHHhcC-CCCceeeeeeeeeeC
Q 011519 48 TLRTATSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEG 125 (484)
Q Consensus 48 ~~~~~~~~f~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~ 125 (484)
++....++|...+.++ +|.|+||.||++. ..++..+|+|.+........ |+.....+ +||||+++++.+...
T Consensus 8 ~~~~~~~~~~~~~~~~-lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~~~ 81 (267)
T PHA03390 8 ELVQFLKNCEIVKKLK-LIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVTTL 81 (267)
T ss_pred HHHHHHHhhcccccee-ecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEecC
Confidence 3333344444433333 5999999999999 56788999999875432221 22222222 699999999999999
Q ss_pred CceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCC-CceeeccCCcc
Q 011519 126 DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV-NPRLSCFGLMK 204 (484)
Q Consensus 126 ~~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~-~~kl~DfG~a~ 204 (484)
+..++||||+++|+|.+++.. ...+++.++..++.||+.||.|||+. |++||||||+||+++.++ .++|+|||++.
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~nil~~~~~~~~~l~dfg~~~ 158 (267)
T PHA03390 82 KGHVLIMDYIKDGDLFDLLKK--EGKLSEAEVKKIIRQLVEALNDLHKH-NIIHNDIKLENVLYDRAKDRIYLCDYGLCK 158 (267)
T ss_pred CeeEEEEEcCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCCHHHEEEeCCCCeEEEecCccce
Confidence 999999999999999999963 34799999999999999999999999 999999999999999888 99999999998
Q ss_pred ccCCCCcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHH
Q 011519 205 NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTE 284 (484)
Q Consensus 205 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (484)
.........++..|+|||++.+..++.++||||||+++|+|++|..|+................... ....+...++.
T Consensus 159 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 236 (267)
T PHA03390 159 IIGTPSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQK--KLPFIKNVSKN 236 (267)
T ss_pred ecCCCccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhcc--cCCcccccCHH
Confidence 8777667788999999999998889999999999999999999998876432211111111111111 11233456789
Q ss_pred HHHHHHHHhccCCCCCCC-hHHHHHH
Q 011519 285 LVRLASRCLQYEPRERPN-PRSLVTA 309 (484)
Q Consensus 285 l~~li~~cl~~dp~~Rps-~~~il~~ 309 (484)
+.+++.+||+.+|.+||+ ++++++|
T Consensus 237 ~~~li~~~l~~~p~~R~~~~~~~l~h 262 (267)
T PHA03390 237 ANDFVQSMLKYNINYRLTNYNEIIKH 262 (267)
T ss_pred HHHHHHHHhccChhhCCchHHHHhcC
Confidence 999999999999999995 6999876
|
|
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-40 Score=310.71 Aligned_cols=247 Identities=18% Similarity=0.275 Sum_probs=200.3
Q ss_pred ccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCc------cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEE
Q 011519 59 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP------DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (484)
Q Consensus 59 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 131 (484)
|...+.||+|+||.||++. ..+++.||+|.+...... ..+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 2 ~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v 81 (268)
T cd06630 2 WLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLF 81 (268)
T ss_pred ccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEE
Confidence 3445667999999999999 577899999998653311 245789999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCC-CceeeccCCccccCCC-
Q 011519 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV-NPRLSCFGLMKNSRDG- 209 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~-~~kl~DfG~a~~~~~~- 209 (484)
|||+++++|.+++. ..+++++..+..++.||+.||.|||+. |++|+||||+||+++.++ .++|+|||++......
T Consensus 82 ~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~ql~~al~~LH~~-~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~ 158 (268)
T cd06630 82 VEWMAGGSVSHLLS--KYGAFKEAVIINYTEQLLRGLSYLHEN-QIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKG 158 (268)
T ss_pred EeccCCCcHHHHHH--HhCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCCCEEEEccccccccccccc
Confidence 99999999999996 345789999999999999999999999 999999999999998776 5999999998765432
Q ss_pred -------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHH
Q 011519 210 -------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG 282 (484)
Q Consensus 210 -------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (484)
....++..|+|||.+.+..++.++||||||+++++|++|..|+.......... ..............+...+
T Consensus 159 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 237 (268)
T cd06630 159 TGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLA-LIFKIASATTAPSIPEHLS 237 (268)
T ss_pred ccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHH-HHHHHhccCCCCCCchhhC
Confidence 12456789999999988889999999999999999999998875332110000 0111111111234555677
Q ss_pred HHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 283 TELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 283 ~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
+++.+++.+||..+|++|||+.+++++
T Consensus 238 ~~~~~~i~~~l~~~p~~R~~~~~ll~~ 264 (268)
T cd06630 238 PGLRDVTLRCLELQPEDRPPSRELLKH 264 (268)
T ss_pred HHHHHHHHHHcCCCcccCcCHHHHhcC
Confidence 899999999999999999999999876
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-39 Score=309.59 Aligned_cols=243 Identities=16% Similarity=0.238 Sum_probs=201.5
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCC-ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCC
Q 011519 59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (484)
Q Consensus 59 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~ 136 (484)
|.+++.||.|+||.||+|.. .++..||||.+..... .....+.+|+.++.+++||||+++++++..++..++||||++
T Consensus 6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06641 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG 85 (277)
T ss_pred hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCC
Confidence 45677889999999999984 5788999999865432 234578899999999999999999999999999999999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----Ccc
Q 011519 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSY 212 (484)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~----~~~ 212 (484)
+++|.+++. ...+++..+..++.|++.||.|||+. |++|+||||+||+++.++.++|+|||++...... ...
T Consensus 86 ~~~l~~~i~---~~~~~~~~~~~~~~~l~~~l~~lh~~-~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~ 161 (277)
T cd06641 86 GGSALDLLE---PGPLDETQIATILREILKGLDYLHSE-KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTF 161 (277)
T ss_pred CCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHccC-CeecCCCCHHhEEECCCCCEEEeecccceecccchhhhccc
Confidence 999999984 34689999999999999999999998 9999999999999999999999999998765432 234
Q ss_pred cCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHH
Q 011519 213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRC 292 (484)
Q Consensus 213 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 292 (484)
.++..|+|||.+.+...+.++|+|||||++|+|++|..|+............ ........+...+.++.+++.+|
T Consensus 162 ~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~ 236 (277)
T cd06641 162 VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLI-----PKNNPPTLEGNYSKPLKEFVEAC 236 (277)
T ss_pred cCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHH-----hcCCCCCCCcccCHHHHHHHHHH
Confidence 5788899999998888899999999999999999999887543211111110 01111223445567899999999
Q ss_pred hccCCCCCCChHHHHHHH
Q 011519 293 LQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 293 l~~dp~~Rps~~~il~~l 310 (484)
|+.+|.+||++.+++.+-
T Consensus 237 l~~~p~~Rp~~~~~l~~~ 254 (277)
T cd06641 237 LNKEPSFRPTAKELLKHK 254 (277)
T ss_pred ccCChhhCcCHHHHHhCH
Confidence 999999999999999983
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-39 Score=315.26 Aligned_cols=251 Identities=17% Similarity=0.226 Sum_probs=203.9
Q ss_pred ccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCc---cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEec
Q 011519 59 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (484)
Q Consensus 59 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey 134 (484)
|..++.||.|+||.||+++ ..++..||+|++...... ....+.+|+.+++.++|||++++++++...+..++||||
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 106 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY 106 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence 4566778999999999999 457889999998654322 245688999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCCcccC
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST 214 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 214 (484)
++| +|.+.+.. ...++++..+..++.||+.||.|||+. +++|+||+|+||+++.++.++|+|||++..........+
T Consensus 107 ~~g-~l~~~~~~-~~~~l~~~~~~~i~~~i~~~l~~lH~~-~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 183 (317)
T cd06635 107 CLG-SASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSH-NMIHRDIKAGNILLTEPGQVKLADFGSASIASPANSFVG 183 (317)
T ss_pred CCC-CHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCcccEEECCCCCEEEecCCCccccCCcccccC
Confidence 965 78887753 345689999999999999999999998 999999999999999999999999999887766667788
Q ss_pred CCCCCCccccc---CCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHH
Q 011519 215 NLAFTPPEYLR---TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291 (484)
Q Consensus 215 t~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 291 (484)
++.|+|||++. ++.++.++|||||||++|+|++|+.||............. ............+..+.+++.+
T Consensus 184 ~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~li~~ 259 (317)
T cd06635 184 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIA----QNESPTLQSNEWSDYFRNFVDS 259 (317)
T ss_pred CccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHH----hccCCCCCCccccHHHHHHHHH
Confidence 99999999974 3568899999999999999999998875432111111110 0000111123456789999999
Q ss_pred HhccCCCCCCChHHHHHHHHhhhcC
Q 011519 292 CLQYEPRERPNPRSLVTALVTLQKD 316 (484)
Q Consensus 292 cl~~dp~~Rps~~~il~~l~~~~~~ 316 (484)
||+.+|.+||++.++++++......
T Consensus 260 ~l~~~p~~Rpt~~~il~~~~~~~~~ 284 (317)
T cd06635 260 CLQKIPQDRPTSEELLKHMFVLRER 284 (317)
T ss_pred HccCCcccCcCHHHHHhChhhhccC
Confidence 9999999999999999998775543
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-40 Score=309.04 Aligned_cols=246 Identities=18% Similarity=0.236 Sum_probs=202.9
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCc--cHHHHHHHHHHHhcCCCCceeeeeeeeee--CCceEEEE
Q 011519 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCE--GDERLLVA 132 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~--~~~~~lv~ 132 (484)
+|++++.||.|+||.||++. ..++..||+|.+...... ..+++..|+++++.++||||+++++++.. ....+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 36778889999999999999 567889999998754332 34568899999999999999999998754 45679999
Q ss_pred ecCCCCCHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhh-----cCCCcccccccccceeecCCCCceeeccCCccc
Q 011519 133 EYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCT-----SKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN 205 (484)
Q Consensus 133 Ey~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~lH-----~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 205 (484)
||+++++|.+++... ....+++..++.++.||+.||.||| +. +++|+||||+||+++.++.+||+|||++..
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~-~i~h~dl~p~nili~~~~~~kl~d~g~~~~ 159 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGN-TVLHRDLKPANIFLDANNNVKLGDFGLAKI 159 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccC-cceecCCCHHHEEEecCCCEEEeccccccc
Confidence 999999999999642 2457899999999999999999999 77 999999999999999999999999999887
Q ss_pred cCCCC----cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHH
Q 011519 206 SRDGR----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 281 (484)
Q Consensus 206 ~~~~~----~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (484)
..... ...+++.|+|||.+.+..++.++|+||||+++++|++|..|+............ ........+...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~ 234 (265)
T cd08217 160 LGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKI-----KEGKFRRIPYRY 234 (265)
T ss_pred ccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHH-----hcCCCCCCcccc
Confidence 65432 356789999999999888999999999999999999999887654322111111 111112344556
Q ss_pred HHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 282 GTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 282 ~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
+..+.+++.+||+.+|++|||+.+|+++
T Consensus 235 ~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 235 SSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred CHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 7889999999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-40 Score=311.61 Aligned_cols=250 Identities=18% Similarity=0.252 Sum_probs=202.9
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCC-ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecC
Q 011519 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~ 135 (484)
++++++.||.|+||.||++.. .+++.||+|.+..... ...+.+.+|++++++++||||+++++.+...+..++|+||+
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYM 81 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEec
Confidence 456778889999999999995 4688999999876543 23567899999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhc-CCCcccccccccceeecCCCCceeeccCCccccCCC--Ccc
Q 011519 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTS-KERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSY 212 (484)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~-~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~--~~~ 212 (484)
++++|.+++.... ..+++..+..++.|++.||.|||+ . |++|+||||+||++++++.++|+|||.+...... ...
T Consensus 82 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~-~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~ 159 (265)
T cd06605 82 DGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHEKH-KIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTF 159 (265)
T ss_pred CCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcCCC-CeecCCCCHHHEEECCCCCEEEeecccchhhHHHHhhcc
Confidence 9999999996432 678999999999999999999999 7 9999999999999999999999999998765332 235
Q ss_pred cCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHh-hhccccccccccccCCCChH-HHHHHHHHHH
Q 011519 213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLI-RDRNIQTLTDSCLEGQFSSD-EGTELVRLAS 290 (484)
Q Consensus 213 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~l~~li~ 290 (484)
.++..|+|||.+.+..++.++||||||+++++|++|+.|+........ ........... .....+.. .+..+.++|.
T Consensus 160 ~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~ 238 (265)
T cd06605 160 VGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNE-PPPRLPSGKFSPDFQDFVN 238 (265)
T ss_pred cCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcC-CCCCCChhhcCHHHHHHHH
Confidence 678899999999988899999999999999999999988764310000 00000000010 01112222 6778999999
Q ss_pred HHhccCCCCCCChHHHHHHH
Q 011519 291 RCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~l 310 (484)
+||..||++|||+.+++.+-
T Consensus 239 ~~l~~~p~~Rpt~~~ll~~~ 258 (265)
T cd06605 239 LCLIKDPRERPSYKELLEHP 258 (265)
T ss_pred HHcCCCchhCcCHHHHhhCc
Confidence 99999999999999999873
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-39 Score=306.48 Aligned_cols=249 Identities=17% Similarity=0.260 Sum_probs=199.9
Q ss_pred ccccccCCCCCCceEEEEEeCC--CcEEEEEEecCCCC----------ccHHHHHHHHHHHhc-CCCCceeeeeeeeeeC
Q 011519 59 ENIVSEHGEKAPNVVYKGKLEN--QFRIAVKRFNRSAW----------PDARQFLEEARAVGQ-LRNRRLANLLGCCCEG 125 (484)
Q Consensus 59 ~~~~~~lG~G~~g~Vy~~~~~~--~~~vavK~~~~~~~----------~~~~~~~~E~~~l~~-l~hpniv~l~~~~~~~ 125 (484)
|.+++.||.|+||.||+|.... ++.+|||.+..... ....++.+|+.++.+ ++||||+++++++...
T Consensus 2 y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 81 (269)
T cd08528 2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLEN 81 (269)
T ss_pred chhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccC
Confidence 5667788999999999999543 78899998854221 123457789998875 7999999999999999
Q ss_pred CceEEEEecCCCCCHHhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCc
Q 011519 126 DERLLVAEYMPNDTLAKHLFH--WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLM 203 (484)
Q Consensus 126 ~~~~lv~Ey~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a 203 (484)
+..++||||+++++|.+++.. .....+++..++.++.|++.||.|||+..+++|+||||+||+++.++.++|+|||++
T Consensus 82 ~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~~ 161 (269)
T cd08528 82 DRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGLA 161 (269)
T ss_pred CeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecccce
Confidence 999999999999999998843 234568999999999999999999997438999999999999999999999999998
Q ss_pred cccCCC---CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChH
Q 011519 204 KNSRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD 280 (484)
Q Consensus 204 ~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (484)
...... ....++..|++||.+.+..++.++||||||+++|+|++|+.|+..................+. ....
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~ 237 (269)
T cd08528 162 KQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEPL----PEGM 237 (269)
T ss_pred eecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCcC----Cccc
Confidence 875543 245678899999999988899999999999999999999988754322221111111111111 1123
Q ss_pred HHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 281 EGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 281 ~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
.++.+.+++.+||+.||++||++.++..++.
T Consensus 238 ~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 238 YSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred CCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 4578999999999999999999999998874
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=312.37 Aligned_cols=250 Identities=20% Similarity=0.268 Sum_probs=199.7
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCC--ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEec
Q 011519 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey 134 (484)
+|++.+.||.|+||.||+|.. .+|+.||||++..... .....+.+|+.++++++||||+++++++..+...++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 367888899999999999994 5789999999876542 2356799999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-----
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----- 209 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~----- 209 (484)
+ +++|.+++... ..++++.+++.++.||+.||.|||+. +++|+||||+||+++.++.++|+|||++......
T Consensus 81 ~-~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~ 157 (286)
T cd07832 81 M-PSDLSEVLRDE-ERPLPEAQVKSYMRMLLKGVAYMHAN-GIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLY 157 (286)
T ss_pred c-CCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCcc
Confidence 9 99999998642 36699999999999999999999998 9999999999999999999999999998875443
Q ss_pred CcccCCCCCCCcccccCCC-CCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcccc--------------ccc--cc-
Q 011519 210 RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ--------------TLT--DS- 271 (484)
Q Consensus 210 ~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~--------------~~~--~~- 271 (484)
....++..|+|||.+.+.. ++.++||||||+++++|+||.+|+.............. .+. ..
T Consensus 158 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (286)
T cd07832 158 SHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKI 237 (286)
T ss_pred ccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcc
Confidence 2346788999999987544 68999999999999999999766643321110000000 000 00
Q ss_pred ccc-------CCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHH
Q 011519 272 CLE-------GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 272 ~~~-------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 310 (484)
... .......+..+.+++.+||..+|++|||+++++.|.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~ 283 (286)
T cd07832 238 TFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHP 283 (286)
T ss_pred cCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCc
Confidence 000 001123458899999999999999999999999873
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-39 Score=305.07 Aligned_cols=245 Identities=28% Similarity=0.435 Sum_probs=199.3
Q ss_pred cccccCCCCCCceEEEEEeCC-----CcEEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEe
Q 011519 60 NIVSEHGEKAPNVVYKGKLEN-----QFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (484)
Q Consensus 60 ~~~~~lG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 133 (484)
.+++.||.|+||.||++.... +..||+|.+...... ..+.+..|+.++..++||||+++++++.+.+..+++||
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e 81 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVME 81 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEe
Confidence 456778999999999999543 388999999765543 46689999999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCC---
Q 011519 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR--- 210 (484)
Q Consensus 134 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~--- 210 (484)
|+++++|.+++.......+++..+..++.|++.||.|||+. +++|+||||+||++++++.++|+|||++.......
T Consensus 82 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~-~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~ 160 (258)
T smart00219 82 YMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESK-NFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYK 160 (258)
T ss_pred ccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcC-CeeecccccceEEEccCCeEEEcccCCceecccccccc
Confidence 99999999999643332389999999999999999999999 99999999999999999999999999987655431
Q ss_pred --cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHH
Q 011519 211 --SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287 (484)
Q Consensus 211 --~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (484)
...+++.|+|||.+.+..++.++||||||+++++|++ |..|+............... .....+...+.++.+
T Consensus 161 ~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 235 (258)
T smart00219 161 KKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKG-----YRLPKPENCPPEIYK 235 (258)
T ss_pred cccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcC-----CCCCCCCcCCHHHHH
Confidence 1235678999999988889999999999999999999 66665433222111111111 111223346788999
Q ss_pred HHHHHhccCCCCCCChHHHHHHH
Q 011519 288 LASRCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 288 li~~cl~~dp~~Rps~~~il~~l 310 (484)
++.+||..||++|||+.++++.|
T Consensus 236 ~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 236 LMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred HHHHHCcCChhhCcCHHHHHhhC
Confidence 99999999999999999998764
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-39 Score=316.43 Aligned_cols=243 Identities=15% Similarity=0.224 Sum_probs=184.6
Q ss_pred ccCCCCCCceEEEEEeC---CCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeee--CCceEEEEecCCC
Q 011519 63 SEHGEKAPNVVYKGKLE---NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE--GDERLLVAEYMPN 137 (484)
Q Consensus 63 ~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~--~~~~~lv~Ey~~~ 137 (484)
.+||+|+||+||+|+.. ++..||+|.+.... ....+.+|+.+++.++||||+++++++.. ....++||||+.+
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~ 84 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEH 84 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCC
Confidence 46799999999999954 45789999987543 23467899999999999999999999854 4568999999965
Q ss_pred CCHHhhhccC-------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceee----cCCCCceeeccCCcccc
Q 011519 138 DTLAKHLFHW-------ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF----DDDVNPRLSCFGLMKNS 206 (484)
Q Consensus 138 gsL~~~l~~~-------~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill----~~~~~~kl~DfG~a~~~ 206 (484)
+|.+++... ....+++..+..++.||+.||.|||+. +++||||||+|||+ +.++.+||+|||+++..
T Consensus 85 -~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~-~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~ 162 (317)
T cd07867 85 -DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN-WVLHRDLKPANILVMGEGPERGRVKIADMGFARLF 162 (317)
T ss_pred -cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC-CEEcCCCCHHHEEEccCCCCCCcEEEeeccceecc
Confidence 788877421 123588999999999999999999998 99999999999999 46678999999999865
Q ss_pred CCC-------CcccCCCCCCCcccccCC-CCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhh----------------
Q 011519 207 RDG-------RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD---------------- 262 (484)
Q Consensus 207 ~~~-------~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~---------------- 262 (484)
... ....+|+.|+|||++.+. .++.++|||||||++|||+||+.||.....+....
T Consensus 163 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (317)
T cd07867 163 NSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMG 242 (317)
T ss_pred CCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcC
Confidence 432 234678899999998764 47999999999999999999998875321110000
Q ss_pred ----ccc---------cccccccccC------------CCChHHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 263 ----RNI---------QTLTDSCLEG------------QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 263 ----~~~---------~~~~~~~~~~------------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
... .......... ......+..+.+|+.+||+.||.+|||+.++++|
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~h 314 (317)
T cd07867 243 FPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQD 314 (317)
T ss_pred CCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcC
Confidence 000 0000000000 0011124568899999999999999999999976
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-39 Score=309.94 Aligned_cols=253 Identities=17% Similarity=0.222 Sum_probs=200.7
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCC-ccHHHHHHHHHHHhcCCCCceeeeeeeeeeC--CceEEEEe
Q 011519 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEG--DERLLVAE 133 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~--~~~~lv~E 133 (484)
.++++++||.|++|.||++.. .+++.||+|.+..... ....++.+|++++++++||||+++++++... +.+++|||
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 81 (287)
T cd06621 2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAME 81 (287)
T ss_pred ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEE
Confidence 456778889999999999995 5688999999875433 2356799999999999999999999998653 46899999
Q ss_pred cCCCCCHHhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC--
Q 011519 134 YMPNDTLAKHLFH--WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 209 (484)
Q Consensus 134 y~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~-- 209 (484)
|+++++|.+++.. .....+++..+..++.||+.||.|||+. +++|+||+|+||++++++.++|+|||++......
T Consensus 82 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~-~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~ 160 (287)
T cd06621 82 YCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR-KIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLA 160 (287)
T ss_pred ecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEEecCCeEEEeecccccccccccc
Confidence 9999999988753 2345689999999999999999999998 9999999999999999999999999998754432
Q ss_pred CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhh----HHhhhccccccccccccCCCC--hHHHH
Q 011519 210 RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL----DLIRDRNIQTLTDSCLEGQFS--SDEGT 283 (484)
Q Consensus 210 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~--~~~~~ 283 (484)
....++..|+|||.+.+..++.++||||||+++|+|++|..|+..... .............+....... ...++
T Consensus 161 ~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (287)
T cd06621 161 GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWSE 240 (287)
T ss_pred ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCCchHH
Confidence 234567889999999988899999999999999999999988764411 000000000101111111111 23467
Q ss_pred HHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 284 ELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 284 ~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
.+.+|+.+||..+|.+|||+.+++.+-+
T Consensus 241 ~~~~li~~~l~~~p~~Rpt~~eil~~~~ 268 (287)
T cd06621 241 EFKDFIKQCLEKDPTRRPTPWDMLEHPW 268 (287)
T ss_pred HHHHHHHHHcCCCcccCCCHHHHHhCcc
Confidence 8999999999999999999999999854
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=312.47 Aligned_cols=241 Identities=17% Similarity=0.244 Sum_probs=198.5
Q ss_pred cccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCCCCCH
Q 011519 62 VSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTL 140 (484)
Q Consensus 62 ~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~~gsL 140 (484)
...||.|++|.||++. ..+++.|++|.+........+.+.+|+.+++.++||||+++++++...+..++|+||+++++|
T Consensus 24 ~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L 103 (285)
T cd06648 24 FVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGAL 103 (285)
T ss_pred ceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCCCCH
Confidence 3566999999999999 457889999998765444456789999999999999999999999999999999999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----CcccCCC
Q 011519 141 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSYSTNL 216 (484)
Q Consensus 141 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~----~~~~~t~ 216 (484)
.+++.. ..+++..+..++.|++.||.|||+. |++||||+|+||+++.++.++|+|||++...... ....+++
T Consensus 104 ~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~ 179 (285)
T cd06648 104 TDIVTH---TRMNEEQIATVCLAVLKALSFLHAQ-GVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLVGTP 179 (285)
T ss_pred HHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCChhhEEEcCCCcEEEcccccchhhccCCcccccccCCc
Confidence 999953 5689999999999999999999998 9999999999999999999999999987654332 2345788
Q ss_pred CCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHHhccC
Q 011519 217 AFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYE 296 (484)
Q Consensus 217 ~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 296 (484)
.|+|||.+.+..++.++||||||+++|+|++|..||............... ..... ..+...+..+.+++.+||..+
T Consensus 180 ~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~l~~li~~~l~~~ 256 (285)
T cd06648 180 YWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDN-LPPKL--KNLHKVSPRLRSFLDRMLVRD 256 (285)
T ss_pred cccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhc-CCCCC--cccccCCHHHHHHHHHHcccC
Confidence 999999998888999999999999999999999887543211111111111 11111 112235678999999999999
Q ss_pred CCCCCChHHHHHH
Q 011519 297 PRERPNPRSLVTA 309 (484)
Q Consensus 297 p~~Rps~~~il~~ 309 (484)
|++|||+.+++++
T Consensus 257 p~~Rpt~~~il~~ 269 (285)
T cd06648 257 PAQRATAAELLNH 269 (285)
T ss_pred hhhCcCHHHHccC
Confidence 9999999999986
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-39 Score=312.66 Aligned_cols=252 Identities=17% Similarity=0.225 Sum_probs=199.5
Q ss_pred CCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCcc--HHHHHHHHHHHhcCCCCceeeeeeeeeeC--CceE
Q 011519 55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLGCCCEG--DERL 129 (484)
Q Consensus 55 ~f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~hpniv~l~~~~~~~--~~~~ 129 (484)
+...|++++.||.|+||.||+|.. .+++.|+||.++...... ...+.+|+.++++++||||+++++++... +..+
T Consensus 3 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (293)
T cd07843 3 SVDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIY 82 (293)
T ss_pred chhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEE
Confidence 445778888999999999999995 468899999997543222 34578899999999999999999998877 8899
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC
Q 011519 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 209 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 209 (484)
+||||+++ +|.+++... ...+++..+..++.||+.||.|||+. +++|+||||+||+++.++.++|+|||++......
T Consensus 83 lv~e~~~~-~L~~~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~-~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 159 (293)
T cd07843 83 MVMEYVEH-DLKSLMETM-KQPFLQSEVKCLMLQLLSGVAHLHDN-WILHRDLKTSNLLLNNRGILKICDFGLAREYGSP 159 (293)
T ss_pred EEehhcCc-CHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeccCCHHHEEECCCCcEEEeecCceeeccCC
Confidence 99999975 999988642 34689999999999999999999998 9999999999999999999999999998865443
Q ss_pred ----CcccCCCCCCCcccccCCC-CCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhc---------------------
Q 011519 210 ----RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR--------------------- 263 (484)
Q Consensus 210 ----~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~--------------------- 263 (484)
....+++.|+|||.+.+.. ++.++|+||||+++++|++|..||...........
T Consensus 160 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (293)
T cd07843 160 LKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPG 239 (293)
T ss_pred ccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccch
Confidence 2345678899999987644 68899999999999999999988754321111000
Q ss_pred ----cccccccccccCCCChH-HHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 264 ----NIQTLTDSCLEGQFSSD-EGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 264 ----~~~~~~~~~~~~~~~~~-~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
.........+...++.. .++.+.+++.+||+.||++|||+.+++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~ 290 (293)
T cd07843 240 AKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH 290 (293)
T ss_pred hcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence 00000001111223332 47789999999999999999999999876
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-40 Score=314.25 Aligned_cols=249 Identities=19% Similarity=0.269 Sum_probs=197.6
Q ss_pred cccccccCCCCCCceEEEEEeC-CCcEEEEEEecCCCCc--cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEec
Q 011519 58 MENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey 134 (484)
.|++++.||.|+||.||+|... +++.||+|++...... ..+.+.+|+++++.++||||+++++++..++..++||||
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 81 (286)
T cd07846 2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEF 81 (286)
T ss_pred ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEec
Confidence 4677888999999999999954 6899999998654322 245688999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----C
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----R 210 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~----~ 210 (484)
+++++|..+.. ....+++..+..++.||+.||.|||+. +++|+||+|+||++++++.++|+|||++...... .
T Consensus 82 ~~~~~l~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~-~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~ 158 (286)
T cd07846 82 VDHTVLDDLEK--YPNGLDESRVRKYLFQILRGIEFCHSH-NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYT 158 (286)
T ss_pred CCccHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEECCCCcEEEEeeeeeeeccCCccccC
Confidence 99999988775 334589999999999999999999998 9999999999999999999999999998765432 2
Q ss_pred cccCCCCCCCcccccCC-CCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhc------cc--------------cccc
Q 011519 211 SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR------NI--------------QTLT 269 (484)
Q Consensus 211 ~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~------~~--------------~~~~ 269 (484)
...++..|+|||++.+. .++.++||||||+++|+|++|..|+........... .. ....
T Consensus 159 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (286)
T cd07846 159 DYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMR 238 (286)
T ss_pred cccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccc
Confidence 34567899999998753 478899999999999999999987754321100000 00 0000
Q ss_pred ccccc-----CCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 270 DSCLE-----GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 270 ~~~~~-----~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
.+... ....+..+..+.+|+.+||..+|++||++.+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 283 (286)
T cd07846 239 LPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH 283 (286)
T ss_pred cccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence 00000 00122456789999999999999999999999876
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-39 Score=312.14 Aligned_cols=250 Identities=19% Similarity=0.272 Sum_probs=195.6
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEe
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 133 (484)
+..|++++.||.|+||+||+|.. .+++.||||.+...... ....+.+|+++++.++||||+++++++...+..++|||
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFE 83 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEe
Confidence 35678889999999999999995 47889999998754322 23457789999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----
Q 011519 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 209 (484)
Q Consensus 134 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~---- 209 (484)
|+++ +|.+++... ...+++..+..++.|++.||.|||+. +++|+||||+||+++.++.+||+|||+++.....
T Consensus 84 ~~~~-~L~~~~~~~-~~~~~~~~~~~~~~ql~~al~~lH~~-~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~ 160 (291)
T cd07844 84 YLDT-DLKQYMDDC-GGGLSMHNVRLFLFQLLRGLAYCHQR-RVLHRDLKPQNLLISERGELKLADFGLARAKSVPSKTY 160 (291)
T ss_pred cCCC-CHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhC-CeecccCCHHHEEEcCCCCEEECccccccccCCCCccc
Confidence 9975 999988643 34689999999999999999999998 9999999999999999999999999998754321
Q ss_pred CcccCCCCCCCcccccC-CCCCCCCceeehHHHHHHHhhCCCCCCchhh--HHhhh--ccc----cccc-----------
Q 011519 210 RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHAL--DLIRD--RNI----QTLT----------- 269 (484)
Q Consensus 210 ~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~--~~~~~--~~~----~~~~----------- 269 (484)
....++..|+|||++.+ ..++.++||||||+++|+|++|..||..... +.... ... ....
T Consensus 161 ~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (291)
T cd07844 161 SNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKP 240 (291)
T ss_pred cccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhcccccc
Confidence 22345788999999875 4578999999999999999999988754321 00000 000 0000
Q ss_pred -------cccccCCCChHHH--HHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 270 -------DSCLEGQFSSDEG--TELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 270 -------~~~~~~~~~~~~~--~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
....... ..... ..+.+++.+||..+|.+|||+.+++.+
T Consensus 241 ~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~ 288 (291)
T cd07844 241 YSFPFYPPRPLINH-APRLDRIPHGEELALKFLQYEPKKRISAAEAMKH 288 (291)
T ss_pred ccccccCChhHHHh-CcCCCCchhHHHHHHHHhccCcccccCHHHHhcC
Confidence 0000000 01122 678899999999999999999999875
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-39 Score=306.79 Aligned_cols=244 Identities=20% Similarity=0.214 Sum_probs=200.2
Q ss_pred ccccccCCCCCCceEEEEEeC-CCcEEEEEEecCCCC-----ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEE
Q 011519 59 ENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAW-----PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (484)
Q Consensus 59 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 132 (484)
|.+.+.||+|+||+||+|... ++..|++|.+..... ...+.+.+|+.+++.++||||+++++++......++|+
T Consensus 2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 81 (258)
T cd06632 2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFL 81 (258)
T ss_pred ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEE
Confidence 344566799999999999954 789999999865332 13457899999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC---
Q 011519 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--- 209 (484)
Q Consensus 133 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~--- 209 (484)
||+++++|.+++.+ ...+++..+..++.||+.||.|||+. |++|+||+|+||+++.++.+||+|||++......
T Consensus 82 e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~~ 158 (258)
T cd06632 82 ELVPGGSLAKLLKK--YGSFPEPVIRLYTRQILLGLEYLHDR-NTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFA 158 (258)
T ss_pred EecCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCCCEEEccCccceeccccccc
Confidence 99999999999963 34689999999999999999999998 9999999999999999999999999998765433
Q ss_pred CcccCCCCCCCcccccCCC-CCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHH
Q 011519 210 RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288 (484)
Q Consensus 210 ~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 288 (484)
....++..|++||.+.... ++.++|+||||+++|+|++|+.||........... .........++...++.+.++
T Consensus 159 ~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l 234 (258)
T cd06632 159 KSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFK----IGRSKELPPIPDHLSDEAKDF 234 (258)
T ss_pred cccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHH----HHhcccCCCcCCCcCHHHHHH
Confidence 3456788999999988766 89999999999999999999988754321111000 000011123345567889999
Q ss_pred HHHHhccCCCCCCChHHHHHH
Q 011519 289 ASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 289 i~~cl~~dp~~Rps~~~il~~ 309 (484)
+.+||+.+|++||++.+++.+
T Consensus 235 i~~~l~~~p~~Rp~~~~~l~~ 255 (258)
T cd06632 235 ILKCLQRDPSLRPTAAELLEH 255 (258)
T ss_pred HHHHhhcCcccCcCHHHHhcC
Confidence 999999999999999999875
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-39 Score=305.41 Aligned_cols=245 Identities=18% Similarity=0.253 Sum_probs=200.8
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCc--cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEec
Q 011519 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey 134 (484)
+|.+.+.||.|+||.||+|.. .+++.|++|.++..... ..+.+..|+.+++.++|+||+++++++...+..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 366778889999999999994 57889999999766543 466799999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCC----
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---- 210 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~---- 210 (484)
+++++|.+++. .+..+++..+..++.|++.||.|||+. |++|+||+|+||++++++.+||+|||++.......
T Consensus 81 ~~~~~L~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lh~~-~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~ 157 (264)
T cd06626 81 CSGGTLEELLE--HGRILDEHVIRVYTLQLLEGLAYLHSH-GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMG 157 (264)
T ss_pred CCCCcHHHHHh--hcCCCChHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCCCEEEcccccccccCCCCCccc
Confidence 99999999996 344589999999999999999999998 99999999999999999999999999987654321
Q ss_pred ----cccCCCCCCCcccccCCC---CCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCCh--HH
Q 011519 211 ----SYSTNLAFTPPEYLRTGR---VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSS--DE 281 (484)
Q Consensus 211 ----~~~~t~~y~aPE~~~~~~---~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 281 (484)
...+++.|+|||++.+.. .+.++||||||++++++++|..||............... .....++. ..
T Consensus 158 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 233 (264)
T cd06626 158 EEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGA----GHKPPIPDSLQL 233 (264)
T ss_pred ccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhc----CCCCCCCccccc
Confidence 245678999999998766 889999999999999999999887533111110000000 01111222 23
Q ss_pred HHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 282 GTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 282 ~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
+..+.+++.+||+.+|.+|||+.+++.+
T Consensus 234 ~~~~~~li~~~l~~~p~~R~~~~~i~~~ 261 (264)
T cd06626 234 SPEGKDFLDRCLESDPKKRPTASELLQH 261 (264)
T ss_pred CHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 6788999999999999999999999875
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-39 Score=310.57 Aligned_cols=250 Identities=18% Similarity=0.239 Sum_probs=195.0
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCC-ccHHHHHHHHHH-HhcCCCCceeeeeeeeeeCCceEEEEec
Q 011519 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-PDARQFLEEARA-VGQLRNRRLANLLGCCCEGDERLLVAEY 134 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~-l~~l~hpniv~l~~~~~~~~~~~lv~Ey 134 (484)
+|.+++.||+|+||.||++.. .+|+.||||+++.... ....++..|+.+ ++.++||||+++++++...+..++||||
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~ 81 (283)
T cd06617 2 DLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEV 81 (283)
T ss_pred CceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhh
Confidence 467788899999999999994 5799999999976532 234456667775 5566899999999999999999999999
Q ss_pred CCCCCHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC---
Q 011519 135 MPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--- 209 (484)
Q Consensus 135 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~--- 209 (484)
++ |+|.+++... ....+++..++.++.||+.||.|||++.+++||||||+||+++.++.+||+|||++......
T Consensus 82 ~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~ 160 (283)
T cd06617 82 MD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVAK 160 (283)
T ss_pred hc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeccccccccccccc
Confidence 96 5898887532 23568999999999999999999998548999999999999999999999999998865432
Q ss_pred CcccCCCCCCCcccccC----CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHH
Q 011519 210 RSYSTNLAFTPPEYLRT----GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 285 (484)
Q Consensus 210 ~~~~~t~~y~aPE~~~~----~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 285 (484)
....++..|+|||.+.+ ..++.++|+|||||++|+|++|+.|+......... .................+.++
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l 237 (283)
T cd06617 161 TIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQ---LKQVVEEPSPQLPAEKFSPEF 237 (283)
T ss_pred ccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHH---HHHHHhcCCCCCCccccCHHH
Confidence 22457889999998865 34688999999999999999999887532111000 000011000001112356789
Q ss_pred HHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 286 VRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 286 ~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
.+++.+||..+|++||++.+++.+-+
T Consensus 238 ~~li~~~l~~~p~~Rp~~~~il~~~~ 263 (283)
T cd06617 238 QDFVNKCLKKNYKERPNYPELLQHPF 263 (283)
T ss_pred HHHHHHHccCChhhCcCHHHHhcCch
Confidence 99999999999999999999998743
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-40 Score=323.76 Aligned_cols=242 Identities=21% Similarity=0.289 Sum_probs=202.1
Q ss_pred cccCCCCCCceEEEEEeC--CC--cEEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCC
Q 011519 62 VSEHGEKAPNVVYKGKLE--NQ--FRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (484)
Q Consensus 62 ~~~lG~G~~g~Vy~~~~~--~~--~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~ 136 (484)
.+.||.|.||+|++|.|. +| ..||||+++..... ...+|++|+.+|.+|+|||+++|||++.+ ....||||+++
T Consensus 115 ~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELap 193 (1039)
T KOG0199|consen 115 YELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELAP 193 (1039)
T ss_pred HHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhcc
Confidence 356799999999999964 33 45899999876654 57789999999999999999999999987 67889999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCCc-cc--
Q 011519 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS-YS-- 213 (484)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~-~~-- 213 (484)
.|||.+.|++.....|.......++.||+.||.||.++ ++|||||-..|+|+-....|||+||||.+.+..... +.
T Consensus 194 lGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLesk-rlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yvm~ 272 (1039)
T KOG0199|consen 194 LGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESK-RLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYVMA 272 (1039)
T ss_pred cchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhh-hhhhhhhhhhhheecccceeeeecccceeccCCCCcceEec
Confidence 99999999875566788999999999999999999999 999999999999999999999999999998765432 21
Q ss_pred ----CCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCC-CCCchhhHHhhhccccccccccccCCCChHHHHHHHHH
Q 011519 214 ----TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKH-IPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288 (484)
Q Consensus 214 ----~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 288 (484)
....|+|||.+....++.+||||+|||++|||+|+.. |+.+...- .+...++..-+-.-|..+++++.++
T Consensus 273 p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~-----qIL~~iD~~erLpRPk~csedIY~i 347 (1039)
T KOG0199|consen 273 PQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGI-----QILKNIDAGERLPRPKYCSEDIYQI 347 (1039)
T ss_pred CCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHH-----HHHHhccccccCCCCCCChHHHHHH
Confidence 2367999999999999999999999999999999664 54432211 1112222222233467889999999
Q ss_pred HHHHhccCCCCCCChHHHHHHH
Q 011519 289 ASRCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 289 i~~cl~~dp~~Rps~~~il~~l 310 (484)
+..||..+|++|||+..|.+.+
T Consensus 348 mk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 348 MKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred HHHhccCCccccccHHHHHHhH
Confidence 9999999999999999998554
|
|
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-40 Score=312.84 Aligned_cols=249 Identities=18% Similarity=0.248 Sum_probs=197.5
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCc--cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecC
Q 011519 59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 59 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~ 135 (484)
|++++.||.|+||.||+|+. .++..||||.++..... ....+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (284)
T cd07860 2 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 81 (284)
T ss_pred ceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeecc
Confidence 56778889999999999994 57889999998754322 2457889999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----Cc
Q 011519 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RS 211 (484)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~----~~ 211 (484)
. ++|.+++....+..+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.+||+|||++...... ..
T Consensus 82 ~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~-~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~ 159 (284)
T cd07860 82 H-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 159 (284)
T ss_pred c-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEECCCCCEEEeeccchhhcccCcccccc
Confidence 6 5899998755566799999999999999999999998 9999999999999999999999999998765432 22
Q ss_pred ccCCCCCCCcccccCCC-CCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccc--------------c------cc
Q 011519 212 YSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQT--------------L------TD 270 (484)
Q Consensus 212 ~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~--------------~------~~ 270 (484)
..+++.|+|||++.+.. ++.++||||||+++|+|+||+.||............... + ..
T Consensus 160 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T cd07860 160 EVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFP 239 (284)
T ss_pred ccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcc
Confidence 34578899999887644 688999999999999999999887643221110000000 0 00
Q ss_pred cccc---CCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 271 SCLE---GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 271 ~~~~---~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
.... .......++.+.++|.+||+.||.+|||+.+++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 281 (284)
T cd07860 240 KWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH 281 (284)
T ss_pred cccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence 0000 00112345778999999999999999999999876
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-40 Score=308.88 Aligned_cols=242 Identities=21% Similarity=0.247 Sum_probs=203.0
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCC---ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEec
Q 011519 59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (484)
Q Consensus 59 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey 134 (484)
|++++.||.|+||.||+|.. .++..||+|.+..... ...+.+.+|+.++++++||||+++++.+..+...++|+||
T Consensus 2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 81 (258)
T cd05578 2 FELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDL 81 (258)
T ss_pred ceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEeC
Confidence 56778889999999999995 4688999999975432 2356789999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC---Cc
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---RS 211 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~---~~ 211 (484)
+.|++|.+++.. ..++++..+..++.||+.||.|||+. +++|+||+|+||++++++.++|+|||++...... ..
T Consensus 82 ~~~~~L~~~l~~--~~~l~~~~~~~~~~~i~~~l~~lh~~-~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~ 158 (258)
T cd05578 82 LLGGDLRYHLSQ--KVKFSEEQVKFWICEIVLALEYLHSK-GIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTTS 158 (258)
T ss_pred CCCCCHHHHHHh--cCCcCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHeEEcCCCCEEEeecccccccCCCccccc
Confidence 999999999963 35789999999999999999999998 9999999999999999999999999998775543 34
Q ss_pred ccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhh---HHhhhccccccccccccCCCChHHHHHHHHH
Q 011519 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL---DLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288 (484)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 288 (484)
..++..|+|||.+.+..++.++|+||||+++|+|++|..|+..... ...... ... .....+...+..+.++
T Consensus 159 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~~~~~~ 232 (258)
T cd05578 159 TSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAK-----QET-ADVLYPATWSTEAIDA 232 (258)
T ss_pred cCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHH-----hcc-ccccCcccCcHHHHHH
Confidence 5677889999999888899999999999999999999998765432 111111 000 1223445567899999
Q ss_pred HHHHhccCCCCCCCh--HHHHHH
Q 011519 289 ASRCLQYEPRERPNP--RSLVTA 309 (484)
Q Consensus 289 i~~cl~~dp~~Rps~--~~il~~ 309 (484)
+.+||+.||.+||++ ++++++
T Consensus 233 i~~~l~~~p~~R~~~~~~~l~~~ 255 (258)
T cd05578 233 INKLLERDPQKRLGDNLKDLKNH 255 (258)
T ss_pred HHHHccCChhHcCCccHHHHhcC
Confidence 999999999999999 776654
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-39 Score=307.48 Aligned_cols=248 Identities=15% Similarity=0.182 Sum_probs=198.5
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCccHHHHHHHHHHHhcC-CCCceeeeeeeeeeCC------ce
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEGD------ER 128 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~------~~ 128 (484)
.+|++++.||.|+||.||+|.. .+++.|++|++..... ..+++.+|+.+++++ .||||+++++++.... ..
T Consensus 6 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 84 (275)
T cd06608 6 GIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQL 84 (275)
T ss_pred hheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEE
Confidence 4667888899999999999995 4678999999876542 346789999999999 6999999999997644 48
Q ss_pred EEEEecCCCCCHHhhhccCC--CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCcccc
Q 011519 129 LLVAEYMPNDTLAKHLFHWE--TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 206 (484)
Q Consensus 129 ~lv~Ey~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~ 206 (484)
++||||+++++|.+++.... +..+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++...
T Consensus 85 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~-~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~ 163 (275)
T cd06608 85 WLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN-KVIHRDIKGQNILLTKNAEVKLVDFGVSAQL 163 (275)
T ss_pred EEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC-CcccCCCCHHHEEEccCCeEEECCCccceec
Confidence 99999999999999986433 46789999999999999999999998 9999999999999999999999999998764
Q ss_pred CCC----CcccCCCCCCCcccccC-----CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCC
Q 011519 207 RDG----RSYSTNLAFTPPEYLRT-----GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQF 277 (484)
Q Consensus 207 ~~~----~~~~~t~~y~aPE~~~~-----~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (484)
... ....++..|+|||++.. ..++.++||||||+++++|++|..||.................. ....
T Consensus 164 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~ 240 (275)
T cd06608 164 DSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPPP---TLKS 240 (275)
T ss_pred ccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccCCC---CCCc
Confidence 332 34557889999998753 24678999999999999999999887543211111111111110 1111
Q ss_pred ChHHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 278 SSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 278 ~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
+...+..+.+|+.+||..||++|||+.+++.+
T Consensus 241 ~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~ 272 (275)
T cd06608 241 PENWSKKFNDFISECLIKNYEQRPFMEELLEH 272 (275)
T ss_pred hhhcCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 23356789999999999999999999999875
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-39 Score=309.83 Aligned_cols=248 Identities=15% Similarity=0.117 Sum_probs=196.2
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCccHHHHHHHHHHHhcC-CCCceeeeeeeeeeC-----CceE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEG-----DERL 129 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~-----~~~~ 129 (484)
.+|.+++.||.|+||.||++.. .+++.+|+|++.... .....+.+|+.+++++ +||||+++++++... +..+
T Consensus 22 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~ 100 (291)
T cd06639 22 DTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLW 100 (291)
T ss_pred CCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeE
Confidence 3457777889999999999994 678899999986543 2245678899999999 799999999998754 3589
Q ss_pred EEEecCCCCCHHhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccC
Q 011519 130 LVAEYMPNDTLAKHLFH--WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 207 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~ 207 (484)
+||||+++|+|.+++.. ..+..+++..++.++.|++.||.|||+. +++|+||||+||+++.++.+||+|||++....
T Consensus 101 lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~dlkp~nili~~~~~~kl~dfg~~~~~~ 179 (291)
T cd06639 101 LVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN-RIIHRDVKGNNILLTTEGGVKLVDFGVSAQLT 179 (291)
T ss_pred EEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHEEEcCCCCEEEeecccchhcc
Confidence 99999999999998853 1345689999999999999999999998 99999999999999999999999999987644
Q ss_pred CC----CcccCCCCCCCcccccCC-----CCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCC
Q 011519 208 DG----RSYSTNLAFTPPEYLRTG-----RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFS 278 (484)
Q Consensus 208 ~~----~~~~~t~~y~aPE~~~~~-----~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (484)
.. ....++..|+|||.+... .++.++|||||||++|+|++|+.|+................. ..-..+
T Consensus 180 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~ 256 (291)
T cd06639 180 STRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPP---PTLLHP 256 (291)
T ss_pred cccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCCC---CCCCcc
Confidence 32 234678899999998643 268899999999999999999988754321111100000000 001112
Q ss_pred hHHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 279 SDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 279 ~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
...+..+.+|+.+||+.+|++|||+.++++|
T Consensus 257 ~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 257 EKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred cccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 3345679999999999999999999999987
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-39 Score=308.25 Aligned_cols=250 Identities=17% Similarity=0.229 Sum_probs=204.0
Q ss_pred CcccccccCCCCCCceEEEEEeC-CCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecC
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~ 135 (484)
..|.+...+|.|+||.||+|... ++..|++|++..... ..+.+.+|+++++.++|+||+++++.+...+..++|+||+
T Consensus 19 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 97 (286)
T cd06614 19 ELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYM 97 (286)
T ss_pred ccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEecc
Confidence 34566778899999999999954 688999999976543 4567899999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----Cc
Q 011519 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RS 211 (484)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~----~~ 211 (484)
++++|.+++.... ..+++..+..++.|++.||.|||+. |++|+||+|+||+++.++.++|+|||++...... ..
T Consensus 98 ~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~-gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~ 175 (286)
T cd06614 98 DGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQ-NVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNS 175 (286)
T ss_pred CCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCChhhEEEcCCCCEEECccchhhhhccchhhhcc
Confidence 9999999997432 3799999999999999999999998 9999999999999999999999999987654432 23
Q ss_pred ccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHH
Q 011519 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291 (484)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 291 (484)
..++..|++||.+.+..++.++||||||+++|+|++|+.|+.................. ....+..++..+.+++.+
T Consensus 176 ~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~ 252 (286)
T cd06614 176 VVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIP---PLKNPEKWSPEFKDFLNK 252 (286)
T ss_pred ccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC---CCcchhhCCHHHHHHHHH
Confidence 45678999999998888999999999999999999999887543221111111010000 111122356789999999
Q ss_pred HhccCCCCCCChHHHHHHHHh
Q 011519 292 CLQYEPRERPNPRSLVTALVT 312 (484)
Q Consensus 292 cl~~dp~~Rps~~~il~~l~~ 312 (484)
||+.+|..|||+.+++.+..-
T Consensus 253 ~l~~~p~~Rpt~~~il~~~~~ 273 (286)
T cd06614 253 CLVKDPEKRPSAEELLQHPFL 273 (286)
T ss_pred HhccChhhCcCHHHHhhChHh
Confidence 999999999999999987543
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-41 Score=326.34 Aligned_cols=240 Identities=16% Similarity=0.217 Sum_probs=194.0
Q ss_pred ccCCCCCCceEEEEE-eCCCcEEEEEEecCC----CCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCc--eEEEEecC
Q 011519 63 SEHGEKAPNVVYKGK-LENQFRIAVKRFNRS----AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDE--RLLVAEYM 135 (484)
Q Consensus 63 ~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~--~~lv~Ey~ 135 (484)
..||+|+|-+||+|. ..+|..||--.++.. .....++|..|+.+|+.|+|||||+++++|.+..+ ..+|+|++
T Consensus 46 evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL~ 125 (632)
T KOG0584|consen 46 EVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITELF 125 (632)
T ss_pred hhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeecc
Confidence 457999999999999 456877874433321 12235789999999999999999999999987765 78999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcC-CCcccccccccceeec-CCCCceeeccCCccccCCC--Cc
Q 011519 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK-ERALYHDLNAYRIVFD-DDVNPRLSCFGLMKNSRDG--RS 211 (484)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~-~~ivH~Dlkp~Nill~-~~~~~kl~DfG~a~~~~~~--~~ 211 (484)
..|+|..|++ +.+.++...+..|++||++||.|||++ ++|||||||.+||+|+ ..|.|||+|+|||...... .+
T Consensus 126 TSGtLr~Y~k--k~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~aks 203 (632)
T KOG0584|consen 126 TSGTLREYRK--KHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHAKS 203 (632)
T ss_pred cCCcHHHHHH--HhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhccccce
Confidence 9999999998 455688899999999999999999997 6799999999999998 4589999999999887654 56
Q ss_pred ccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHH
Q 011519 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291 (484)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 291 (484)
..|||.|||||+.. ..|+...||||||++++||+|+..|+......- .....+.....+..+..--.+++++||.+
T Consensus 204 vIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~A---QIYKKV~SGiKP~sl~kV~dPevr~fIek 279 (632)
T KOG0584|consen 204 VIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPA---QIYKKVTSGIKPAALSKVKDPEVREFIEK 279 (632)
T ss_pred eccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHH---HHHHHHHcCCCHHHhhccCCHHHHHHHHH
Confidence 78999999999987 889999999999999999999998875321110 11111111111112222235889999999
Q ss_pred HhccCCCCCCChHHHHHH
Q 011519 292 CLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 292 cl~~dp~~Rps~~~il~~ 309 (484)
||.. ..+|||+.|+|.+
T Consensus 280 Cl~~-~~~R~sa~eLL~d 296 (632)
T KOG0584|consen 280 CLAT-KSERLSAKELLKD 296 (632)
T ss_pred HhcC-chhccCHHHHhhC
Confidence 9999 9999999999987
|
|
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-39 Score=308.77 Aligned_cols=243 Identities=18% Similarity=0.236 Sum_probs=196.7
Q ss_pred CCCCCCceEEEEE-eCCCcEEEEEEecCCCC---ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCCCCCH
Q 011519 65 HGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTL 140 (484)
Q Consensus 65 lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~~gsL 140 (484)
||.|+||+||++. ..+|+.||+|.+..... .....+..|+.++++++||||+++++.+...+..++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 5999999999998 45789999999865322 1244678899999999999999999999999999999999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC---CcccCCCC
Q 011519 141 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---RSYSTNLA 217 (484)
Q Consensus 141 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~---~~~~~t~~ 217 (484)
.+++.......+++..+..++.|++.||.|||+. |++|+||+|+||+++.++.++|+|||++...... ....++..
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~-~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~ 159 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQR-RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRAGTPG 159 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEECCCCCEEEccCcchhhhccCCccccccCCCC
Confidence 9999754445799999999999999999999998 9999999999999999999999999998765432 23456788
Q ss_pred CCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHHhccCC
Q 011519 218 FTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEP 297 (484)
Q Consensus 218 y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 297 (484)
|+|||++.+..++.++||||||+++++|++|+.||.................. .....+...++.+.+++.+||+.||
T Consensus 160 y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p 237 (277)
T cd05577 160 YMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLE--MAVEYPDKFSPEAKDLCEALLQKDP 237 (277)
T ss_pred cCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhcccc--ccccCCccCCHHHHHHHHHHccCCh
Confidence 99999998888999999999999999999999887543210000000000000 1112344557889999999999999
Q ss_pred CCCC-----ChHHHHHHH
Q 011519 298 RERP-----NPRSLVTAL 310 (484)
Q Consensus 298 ~~Rp-----s~~~il~~l 310 (484)
.+|| ++.+++.|-
T Consensus 238 ~~R~~~~~~~~~~ll~h~ 255 (277)
T cd05577 238 EKRLGCRGGSADEVREHP 255 (277)
T ss_pred hHccCCCcccHHHHHhCh
Confidence 9999 777787763
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-41 Score=298.06 Aligned_cols=246 Identities=17% Similarity=0.205 Sum_probs=199.0
Q ss_pred ccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCC-ccHHHHHHHHHHHhcC-CCCceeeeeeeeeeCCceEEEEecCCC
Q 011519 61 IVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW-PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMPN 137 (484)
Q Consensus 61 ~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~Ey~~~ 137 (484)
-++.||.|+||+|+|-. .+.|+..|||+|+.... ...++++.|.+...+- ..||||+++|.+...+..||.||+|+-
T Consensus 68 dlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd~ 147 (361)
T KOG1006|consen 68 DLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMDI 147 (361)
T ss_pred HHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHhh
Confidence 35778999999999999 56899999999987665 3467899999976665 699999999999999999999999954
Q ss_pred CCHHhhhc---cCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC---Cc
Q 011519 138 DTLAKHLF---HWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---RS 211 (484)
Q Consensus 138 gsL~~~l~---~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~---~~ 211 (484)
||+.+.+ ......+++...-+|..-.+.||.||.....||||||||+|||++..|.+||||||++..+.++ +.
T Consensus 148 -SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiAkT~ 226 (361)
T KOG1006|consen 148 -SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIAKTV 226 (361)
T ss_pred -hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHHHHHHhhh
Confidence 7777653 2345568999999999999999999998779999999999999999999999999998876554 45
Q ss_pred ccCCCCCCCcccccC--CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccc---cccccCCCChHHHHHHH
Q 011519 212 YSTNLAFTPPEYLRT--GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLT---DSCLEGQFSSDEGTELV 286 (484)
Q Consensus 212 ~~~t~~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~ 286 (484)
-.|...|||||.+.. ..|+-+|||||||++|+|+.||..|+..+.. +.++.-+.+. +......-....+..+.
T Consensus 227 daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s--vfeql~~Vv~gdpp~l~~~~~~~~~s~~~~ 304 (361)
T KOG1006|consen 227 DAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS--VFEQLCQVVIGDPPILLFDKECVHYSFSMV 304 (361)
T ss_pred ccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH--HHHHHHHHHcCCCCeecCcccccccCHHHH
Confidence 578899999999974 3489999999999999999999988776533 2211111111 11111111234678899
Q ss_pred HHHHHHhccCCCCCCChHHHHHH
Q 011519 287 RLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 287 ~li~~cl~~dp~~Rps~~~il~~ 309 (484)
.+|..||.+|-..||++.+++.+
T Consensus 305 ~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 305 RFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred HHHHHHhhcccccCcchhhhhcC
Confidence 99999999999999999999877
|
|
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-39 Score=308.51 Aligned_cols=241 Identities=18% Similarity=0.183 Sum_probs=190.6
Q ss_pred CCCCCCceEEEEEe-CCCcEEEEEEecCCCCc---cHHHHHHHHHHHhc---CCCCceeeeeeeeeeCCceEEEEecCCC
Q 011519 65 HGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP---DARQFLEEARAVGQ---LRNRRLANLLGCCCEGDERLLVAEYMPN 137 (484)
Q Consensus 65 lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~---l~hpniv~l~~~~~~~~~~~lv~Ey~~~ 137 (484)
||+|+||.||++.. .+++.||||.+...... ....+.+|..+++. .+||||+.+++++...+..++||||+++
T Consensus 2 lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (279)
T cd05633 2 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMNG 81 (279)
T ss_pred cccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCCC
Confidence 69999999999994 56899999998654322 12234555544443 4799999999999999999999999999
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC--CcccCC
Q 011519 138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RSYSTN 215 (484)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~--~~~~~t 215 (484)
|+|.+++. ..+.+++..+..++.|++.||.|||+. +++|+||||+|||++.++.++|+|||++...... ....|+
T Consensus 82 ~~L~~~i~--~~~~l~~~~~~~i~~qi~~al~~lH~~-~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 158 (279)
T cd05633 82 GDLHYHLS--QHGVFSEKEMRFYATEIILGLEHMHNR-FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGT 158 (279)
T ss_pred CCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CcCCCCCCHHHEEECCCCCEEEccCCcceeccccCccCcCCC
Confidence 99999986 345699999999999999999999999 9999999999999999999999999998754332 234688
Q ss_pred CCCCCcccccC-CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHHhc
Q 011519 216 LAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ 294 (484)
Q Consensus 216 ~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 294 (484)
+.|+|||.+.+ ..++.++|||||||++|+|++|..||.......... ..... .......+...+.++.+++.+||.
T Consensus 159 ~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~li~~~l~ 235 (279)
T cd05633 159 HGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE--IDRMT-LTVNVELPDSFSPELKSLLEGLLQ 235 (279)
T ss_pred cCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHH--HHHHh-hcCCcCCccccCHHHHHHHHHHhc
Confidence 99999999874 458999999999999999999999886432111100 00000 011123445567899999999999
Q ss_pred cCCCCCC-----ChHHHHHHHH
Q 011519 295 YEPRERP-----NPRSLVTALV 311 (484)
Q Consensus 295 ~dp~~Rp-----s~~~il~~l~ 311 (484)
.||.+|| |+.++++|.+
T Consensus 236 ~~p~~R~~~~~~~~~~~~~h~~ 257 (279)
T cd05633 236 RDVSKRLGCLGRGAQEVKEHVF 257 (279)
T ss_pred CCHHHhcCCCCCCHHHHHhCcc
Confidence 9999999 6999999843
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-39 Score=305.49 Aligned_cols=245 Identities=17% Similarity=0.252 Sum_probs=201.6
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCC--ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecC
Q 011519 59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 59 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~ 135 (484)
|.+.+.||.|+||.||+|.. .+|..||+|.+..... ...+.+.+|+.+++.++||||+++++.+...+..++|+||+
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 81 (257)
T cd08225 2 YEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYC 81 (257)
T ss_pred ceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecC
Confidence 45667789999999999994 5688999999865422 23457889999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCC-ceeeccCCccccCCCC----
Q 011519 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN-PRLSCFGLMKNSRDGR---- 210 (484)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~-~kl~DfG~a~~~~~~~---- 210 (484)
++++|.+++....+..+++..+..++.|++.||.|||+. +++|+||||+||++++++. +||+|||.+.......
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~-~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~ 160 (257)
T cd08225 82 DGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDR-KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAY 160 (257)
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccccCCHHHEEEcCCCCeEEecccccchhccCCccccc
Confidence 999999999754455689999999999999999999998 9999999999999998764 6999999987665432
Q ss_pred cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHH
Q 011519 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (484)
Q Consensus 211 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (484)
...|++.|+|||++.+..++.++|+||||+++++|++|..|+................. ...+...+..+.+++.
T Consensus 161 ~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~ 235 (257)
T cd08225 161 TCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYF-----APISPNFSRDLRSLIS 235 (257)
T ss_pred ccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcccC-----CCCCCCCCHHHHHHHH
Confidence 23578899999999888899999999999999999999988764322221111111111 1223345678999999
Q ss_pred HHhccCCCCCCChHHHHHH
Q 011519 291 RCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~ 309 (484)
+||..+|++|||+.+++.+
T Consensus 236 ~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 236 QLFKVSPRDRPSITSILKR 254 (257)
T ss_pred HHhccChhhCcCHHHHhhC
Confidence 9999999999999999876
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-39 Score=305.15 Aligned_cols=247 Identities=19% Similarity=0.281 Sum_probs=204.3
Q ss_pred cccccccCCCCCCceEEEEEeC-CCcEEEEEEecCCCC-ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecC
Q 011519 58 MENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~ 135 (484)
++++.+.||.|++|.||+|+.. +++.|+||++..... .....+.+|+..+.+++||||+++++++...+..++||||+
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYM 81 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEec
Confidence 4567788899999999999954 689999999976654 33567999999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhc-CCCcccccccccceeecCCCCceeeccCCccccCCCC----
Q 011519 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTS-KERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---- 210 (484)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~-~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~---- 210 (484)
++++|.+++.. ...+++..++.++.|++.||.|||+ . +++|+||+|+||+++.++.++|+|||++.......
T Consensus 82 ~~~~L~~~l~~--~~~l~~~~~~~~~~~l~~~l~~lh~~~-~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~ 158 (264)
T cd06623 82 DGGSLADLLKK--VGKIPEPVLAYIARQILKGLDYLHTKR-HIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCN 158 (264)
T ss_pred CCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHhccC-CCccCCCCHHHEEECCCCCEEEccCccceecccCCCccc
Confidence 99999999963 3678999999999999999999999 8 99999999999999999999999999988765432
Q ss_pred cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChH-HHHHHHHHH
Q 011519 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD-EGTELVRLA 289 (484)
Q Consensus 211 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~li 289 (484)
...++..|+|||.+.+..++.++|+||||+++|+|+||..|+......... .....+.... ....+.. .+..+.+++
T Consensus 159 ~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~l~~li 236 (264)
T cd06623 159 TFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFF-ELMQAICDGP-PPSLPAEEFSPEFRDFI 236 (264)
T ss_pred ceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHH-HHHHHHhcCC-CCCCCcccCCHHHHHHH
Confidence 345778999999999888999999999999999999999887544200000 0001111111 1122333 668899999
Q ss_pred HHHhccCCCCCCChHHHHHH
Q 011519 290 SRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 290 ~~cl~~dp~~Rps~~~il~~ 309 (484)
.+||..+|++|||+.+++++
T Consensus 237 ~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 237 SACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred HHHccCChhhCCCHHHHHhC
Confidence 99999999999999999987
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-40 Score=298.68 Aligned_cols=244 Identities=18% Similarity=0.217 Sum_probs=208.5
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCcc---HHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEE
Q 011519 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD---ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 132 (484)
.+++.++.||+|.||.|-+++ ..+++.+|||++++.-... ...-+.|-++|+..+||.+..+--.|+..+++++||
T Consensus 168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVM 247 (516)
T KOG0690|consen 168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVM 247 (516)
T ss_pred chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEE
Confidence 344667778999999999999 7789999999998765433 234567899999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCcccc----CC
Q 011519 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS----RD 208 (484)
Q Consensus 133 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~----~~ 208 (484)
||..||.|.-+|. +.+.+++.....+..+|+.||.|||++ +||+||||.+|+|+|.+|.+||+|||+++.. ..
T Consensus 248 eyanGGeLf~HLs--rer~FsE~RtRFYGaEIvsAL~YLHs~-~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g~t 324 (516)
T KOG0690|consen 248 EYANGGELFFHLS--RERVFSEDRTRFYGAEIVSALGYLHSR-NIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYGDT 324 (516)
T ss_pred EEccCceEeeehh--hhhcccchhhhhhhHHHHHHhhhhhhC-CeeeeechhhhheeccCCceEeeecccchhcccccce
Confidence 9999999999986 456799999999999999999999998 9999999999999999999999999998753 22
Q ss_pred CCcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHH
Q 011519 209 GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288 (484)
Q Consensus 209 ~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 288 (484)
.++.+|||.|.|||++....|..+.|.|.+|||+|||++|+.||.....+.+..-.+..- -.+|...+++...|
T Consensus 325 ~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed------~kFPr~ls~eAktL 398 (516)
T KOG0690|consen 325 TKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMED------LKFPRTLSPEAKTL 398 (516)
T ss_pred eccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhh------ccCCccCCHHHHHH
Confidence 467899999999999999999999999999999999999999998654333322222111 14677888999999
Q ss_pred HHHHhccCCCCCC-----ChHHHHHH
Q 011519 289 ASRCLQYEPRERP-----NPRSLVTA 309 (484)
Q Consensus 289 i~~cl~~dp~~Rp-----s~~~il~~ 309 (484)
+..+|.+||.+|. .+.||.+|
T Consensus 399 LsGLL~kdP~kRLGgGpdDakEi~~h 424 (516)
T KOG0690|consen 399 LSGLLKKDPKKRLGGGPDDAKEIMRH 424 (516)
T ss_pred HHHHhhcChHhhcCCCchhHHHHHhh
Confidence 9999999999994 46777766
|
|
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-39 Score=310.41 Aligned_cols=249 Identities=20% Similarity=0.281 Sum_probs=199.0
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCC--ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEec
Q 011519 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey 134 (484)
+|++++.||.|+||.||+|.. .+++.||||+++.... ...+.+.+|+++++.++|+||+++++++...+..++||||
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 81 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEY 81 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEec
Confidence 467888899999999999995 4688999999875432 2246789999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCC----
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---- 210 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~---- 210 (484)
++++.|..++. ....+++..+..++.||+.||.|||+. +++|+||+|+||++++++.+||+|||++.......
T Consensus 82 ~~~~~l~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~-~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~ 158 (288)
T cd07833 82 VERTLLELLEA--SPGGLPPDAVRSYIWQLLQAIAYCHSH-NIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPL 158 (288)
T ss_pred CCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEECCCCCEEEEeeecccccCCCccccc
Confidence 99877766554 345589999999999999999999998 99999999999999999999999999987754432
Q ss_pred -cccCCCCCCCcccccCC-CCCCCCceeehHHHHHHHhhCCCCCCchhhHHh-hh-------------------cccc--
Q 011519 211 -SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLI-RD-------------------RNIQ-- 266 (484)
Q Consensus 211 -~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~-~~-------------------~~~~-- 266 (484)
...++..|+|||++.+. .++.++||||||+++|+|++|..|+........ .. ....
T Consensus 159 ~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (288)
T cd07833 159 TDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGV 238 (288)
T ss_pred cCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCcccccc
Confidence 35567889999999887 789999999999999999999987754311100 00 0000
Q ss_pred ccccc----cccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 267 TLTDS----CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 267 ~~~~~----~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
..... .....++..++.++.+|+.+||..+|++|||+++++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 285 (288)
T cd07833 239 AFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH 285 (288)
T ss_pred ccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence 00000 00011233347889999999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=304.45 Aligned_cols=244 Identities=18% Similarity=0.236 Sum_probs=199.5
Q ss_pred ccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCC-ccHHHHHHHHHHHhcCC---CCceeeeeeeeeeCCceEEEEe
Q 011519 59 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLR---NRRLANLLGCCCEGDERLLVAE 133 (484)
Q Consensus 59 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~---hpniv~l~~~~~~~~~~~lv~E 133 (484)
|++++.||.|+||.||+|. ..+++.||||.++.... .....+.+|+.+++.++ |||++++++++......++|||
T Consensus 3 y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e 82 (277)
T cd06917 3 YQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIME 82 (277)
T ss_pred hhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEe
Confidence 5667788999999999999 46789999999875432 33567889999999996 9999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----
Q 011519 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 209 (484)
Q Consensus 134 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~---- 209 (484)
|+++++|.+++.. +.+++..++.++.|++.||.|||+. |++|+||+|+||++++++.++|+|||++......
T Consensus 83 ~~~~~~L~~~~~~---~~l~~~~~~~i~~~i~~~l~~lh~~-~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~ 158 (277)
T cd06917 83 YAEGGSVRTLMKA---GPIAEKYISVIIREVLVALKYIHKV-GVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKR 158 (277)
T ss_pred cCCCCcHHHHHHc---cCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCcCHHHEEEcCCCCEEEccCCceeecCCCcccc
Confidence 9999999999853 4789999999999999999999998 9999999999999999999999999998765432
Q ss_pred CcccCCCCCCCcccccCC-CCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCCh-HHHHHHHH
Q 011519 210 RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSS-DEGTELVR 287 (484)
Q Consensus 210 ~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~ 287 (484)
....|+..|+|||.+.++ .++.++||||||+++|+|++|..|+.............. . ....++. ..+.++.+
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~ 233 (277)
T cd06917 159 STFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPK-S----KPPRLEDNGYSKLLRE 233 (277)
T ss_pred ccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhcccc-C----CCCCCCcccCCHHHHH
Confidence 234678899999998754 468899999999999999999988754322111111100 0 1111222 25678999
Q ss_pred HHHHHhccCCCCCCChHHHHHHHH
Q 011519 288 LASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 288 li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
++.+||..||++||++.+++.+-+
T Consensus 234 ~i~~~l~~~p~~R~~~~~il~~~~ 257 (277)
T cd06917 234 FVAACLDEEPKERLSAEELLKSKW 257 (277)
T ss_pred HHHHHcCCCcccCcCHHHHhhChH
Confidence 999999999999999999998743
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-40 Score=292.57 Aligned_cols=243 Identities=17% Similarity=0.147 Sum_probs=200.6
Q ss_pred ccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCccHHHHHHHHHHHhcC-CCCceeeeeeeeee----CCceEEEEecCC
Q 011519 63 SEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCE----GDERLLVAEYMP 136 (484)
Q Consensus 63 ~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~----~~~~~lv~Ey~~ 136 (484)
..||-|-.|.|-.+. ..+++.+|+|++... ....+|+++.... .|||||.+++++.. ...+.||||.++
T Consensus 68 qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~me 142 (400)
T KOG0604|consen 68 QVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMECME 142 (400)
T ss_pred hhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeeccc
Confidence 457999999999998 568999999999643 4567899998887 59999999999754 345789999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeec---CCCCceeeccCCccccCCC---C
Q 011519 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD---DDVNPRLSCFGLMKNSRDG---R 210 (484)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~---~~~~~kl~DfG~a~~~~~~---~ 210 (484)
||.|++.|.++....+++.++..|+.||..|+.|||+. +|.||||||+|+|.+ .|..+||+|||+|+..... .
T Consensus 143 GGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~-nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~~~L~ 221 (400)
T KOG0604|consen 143 GGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSM-NIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEPGDLM 221 (400)
T ss_pred chHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhc-chhhccCChhheeeecCCCCcceEecccccccccCCCcccc
Confidence 99999999988888899999999999999999999999 999999999999997 4556999999999986532 4
Q ss_pred cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCC----hHHHHHHH
Q 011519 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFS----SDEGTELV 286 (484)
Q Consensus 211 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~ 286 (484)
+.+-||.|.|||++....|+..+|+||+||++|-|++|.+||.+....-+..+-...+.... ..|| ..+++...
T Consensus 222 TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gq--y~FP~pEWs~VSe~aK 299 (400)
T KOG0604|consen 222 TPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQ--YEFPEPEWSCVSEAAK 299 (400)
T ss_pred CCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccC--ccCCChhHhHHHHHHH
Confidence 66779999999999999999999999999999999999999986533111111111111111 1233 45689999
Q ss_pred HHHHHHhccCCCCCCChHHHHHHHHhh
Q 011519 287 RLASRCLQYEPRERPNPRSLVTALVTL 313 (484)
Q Consensus 287 ~li~~cl~~dp~~Rps~~~il~~l~~~ 313 (484)
++|+.+|..+|.+|.|+.++++|-+-.
T Consensus 300 dlIR~LLkt~PteRlTI~~~m~hpwi~ 326 (400)
T KOG0604|consen 300 DLIRKLLKTEPTERLTIEEVMDHPWIN 326 (400)
T ss_pred HHHHHHhcCCchhheeHHHhhcCchhc
Confidence 999999999999999999999986643
|
|
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-39 Score=303.74 Aligned_cols=242 Identities=17% Similarity=0.168 Sum_probs=193.2
Q ss_pred ccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCcc---HHHHHHHHHHH-hcCCCCceeeeeeeeeeCCceEEEEecCCC
Q 011519 63 SEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPD---ARQFLEEARAV-GQLRNRRLANLLGCCCEGDERLLVAEYMPN 137 (484)
Q Consensus 63 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l-~~l~hpniv~l~~~~~~~~~~~lv~Ey~~~ 137 (484)
+.||.|+||.||+|.. .+++.||||.+....... ...+..|..++ ...+||||+++++++...+..++||||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 4679999999999994 568899999987543221 23345555544 445899999999999999999999999999
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCCcccCCCC
Q 011519 138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA 217 (484)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~t~~ 217 (484)
++|.+++. ..+.+++..+..++.||+.||.|||+. +++|+||+|+||+++.++.++|+|||++..........+++.
T Consensus 82 ~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~lH~~-~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 158 (260)
T cd05611 82 GDCASLIK--TLGGLPEDWAKQYIAEVVLGVEDLHQR-GIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKFVGTPD 158 (260)
T ss_pred CCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEECCCCcEEEeecccceeccccccCCCCcC
Confidence 99999996 345689999999999999999999998 999999999999999999999999999887666666778899
Q ss_pred CCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHHhccCC
Q 011519 218 FTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEP 297 (484)
Q Consensus 218 y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 297 (484)
|++||.+.+..++.++||||||+++|+|++|..|+.................. ........++..+.+++.+||+.+|
T Consensus 159 y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~~p 236 (260)
T cd05611 159 YLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRIN--WPEEVKEFCSPEAVDLINRLLCMDP 236 (260)
T ss_pred ccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccC--CCCcccccCCHHHHHHHHHHccCCH
Confidence 99999998888899999999999999999999887644322221111110000 1111223457889999999999999
Q ss_pred CCCCCh---HHHHHH
Q 011519 298 RERPNP---RSLVTA 309 (484)
Q Consensus 298 ~~Rps~---~~il~~ 309 (484)
++||++ .+++.|
T Consensus 237 ~~R~~~~~~~~~l~~ 251 (260)
T cd05611 237 AKRLGANGYQEIKSH 251 (260)
T ss_pred HHccCCCcHHHHHcC
Confidence 999966 455554
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-39 Score=303.92 Aligned_cols=239 Identities=16% Similarity=0.178 Sum_probs=198.5
Q ss_pred CCCCCCceEEEEEe-CCCcEEEEEEecCCCCc---cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCCCCCH
Q 011519 65 HGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTL 140 (484)
Q Consensus 65 lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~~gsL 140 (484)
||.|+||.||+++. .+++.||+|++...... ..+.+.+|+.+++.++||||+++++.+.++...++||||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 59999999999995 45889999999754322 245789999999999999999999999999999999999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC---CcccCCCC
Q 011519 141 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---RSYSTNLA 217 (484)
Q Consensus 141 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~---~~~~~t~~ 217 (484)
.+++.+ ...+++..+..++.||+.||.|||+. +++|+||+|+||+++.++.++|+|||++...... ....+++.
T Consensus 81 ~~~l~~--~~~l~~~~~~~~~~~i~~~l~~lH~~-~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~ 157 (262)
T cd05572 81 WTILRD--RGLFDEYTARFYIACVVLAFEYLHNR-GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFCGTPE 157 (262)
T ss_pred HHHHhh--cCCCCHHHHHHHHHHHHHHHHHHhhC-CcccCCCCHHHEEEcCCCCEEEeeCCcccccCcccccccccCCcC
Confidence 999963 34689999999999999999999998 9999999999999999999999999998876543 23467889
Q ss_pred CCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchh--hHHhhhccccccccccccCCCChHHHHHHHHHHHHHhcc
Q 011519 218 FTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHA--LDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQY 295 (484)
Q Consensus 218 y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 295 (484)
|++||.+.+..++.++|+||||+++|+|++|..|+.... ....... .........++...+..+.+++.+||..
T Consensus 158 ~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 233 (262)
T cd05572 158 YVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYND----ILKGNGKLEFPNYIDKAAKDLIKQLLRR 233 (262)
T ss_pred ccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHH----HhccCCCCCCCcccCHHHHHHHHHHccC
Confidence 999999988889999999999999999999998876443 1111111 1111112234444578999999999999
Q ss_pred CCCCCCC-----hHHHHHHH
Q 011519 296 EPRERPN-----PRSLVTAL 310 (484)
Q Consensus 296 dp~~Rps-----~~~il~~l 310 (484)
+|++||+ +.+++++-
T Consensus 234 ~p~~R~~~~~~~~~~l~~~~ 253 (262)
T cd05572 234 NPEERLGNLKGGIKDIKKHK 253 (262)
T ss_pred ChhhCcCCcccCHHHHhcCh
Confidence 9999999 88888763
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-39 Score=311.03 Aligned_cols=248 Identities=21% Similarity=0.200 Sum_probs=196.1
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCc-----cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEE
Q 011519 59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-----DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (484)
Q Consensus 59 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 132 (484)
|++++.||.|+||.||+|.. .+++.||||.+...... ....+..|+++++.++|+||+++++++.+.+..++||
T Consensus 2 y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 81 (298)
T cd07841 2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVF 81 (298)
T ss_pred ceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEE
Confidence 56677889999999999994 56899999999765433 2345778999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC---
Q 011519 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--- 209 (484)
Q Consensus 133 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~--- 209 (484)
||+ +|+|.+++.... ..+++..+..++.||+.||.|||+. |++|+||||+||+++.++.++|+|||++......
T Consensus 82 e~~-~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~~-~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~ 158 (298)
T cd07841 82 EFM-ETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHSN-WILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRK 158 (298)
T ss_pred ccc-CCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhC-CeeecCCChhhEEEcCCCCEEEccceeeeeccCCCcc
Confidence 999 889999996422 3699999999999999999999999 9999999999999999999999999998876443
Q ss_pred -CcccCCCCCCCcccccC-CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcccc--------------cccccc-
Q 011519 210 -RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ--------------TLTDSC- 272 (484)
Q Consensus 210 -~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~--------------~~~~~~- 272 (484)
....+++.|+|||.+.+ ..++.++|||||||++++|++|..||.............. ......
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (298)
T cd07841 159 MTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVE 238 (298)
T ss_pred ccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhccccccccc
Confidence 22345678999999865 4578899999999999999999766543221100000000 000000
Q ss_pred --cc-----CCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 273 --LE-----GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 273 --~~-----~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
.. .......+..+.+++.+||+.||++|||+.+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 239 FKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred ccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 00 01113346789999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-39 Score=333.33 Aligned_cols=253 Identities=16% Similarity=0.167 Sum_probs=186.5
Q ss_pred CcccccccCCCCCCceEEEEEeCC--CcEEEEEEec--------------C---CCCccHHHHHHHHHHHhcCCCCceee
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLEN--QFRIAVKRFN--------------R---SAWPDARQFLEEARAVGQLRNRRLAN 117 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~~--~~~vavK~~~--------------~---~~~~~~~~~~~E~~~l~~l~hpniv~ 117 (484)
..|+++++||+|+||+||++..+. +..+++|.+. + ........+.+|+.+|++++|||||+
T Consensus 148 ~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv~ 227 (501)
T PHA03210 148 AHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENILK 227 (501)
T ss_pred hccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcCc
Confidence 578999999999999999987432 2222222111 0 11112446889999999999999999
Q ss_pred eeeeeeeCCceEEEEecCCCCCHHhhhccCC---CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCC
Q 011519 118 LLGCCCEGDERLLVAEYMPNDTLAKHLFHWE---TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN 194 (484)
Q Consensus 118 l~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~ 194 (484)
+++++...+..++|+|++. ++|.+++.... ........+..|+.||+.||.|||+. |||||||||+|||++.++.
T Consensus 228 l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~-gIiHrDLKP~NILl~~~~~ 305 (501)
T PHA03210 228 IEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK-KLIHRDIKLENIFLNCDGK 305 (501)
T ss_pred EeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEECCCCC
Confidence 9999999999999999995 57888774321 12234567788999999999999999 9999999999999999999
Q ss_pred ceeeccCCccccCCC-----CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhh----HHhhh-cc
Q 011519 195 PRLSCFGLMKNSRDG-----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL----DLIRD-RN 264 (484)
Q Consensus 195 ~kl~DfG~a~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~----~~~~~-~~ 264 (484)
+||+|||+++..... ....||+.|+|||++.+..++.++|||||||++|||++|..+|..... ..... ..
T Consensus 306 vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~ 385 (501)
T PHA03210 306 IVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIID 385 (501)
T ss_pred EEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHH
Confidence 999999999865432 235689999999999988899999999999999999999865432210 00000 00
Q ss_pred -----cccccc----------cc----ccCCCC-----hHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 265 -----IQTLTD----------SC----LEGQFS-----SDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 265 -----~~~~~~----------~~----~~~~~~-----~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
.....+ .. ....++ ...+.++.+++.+||+.||.+|||+.|++.+-+
T Consensus 386 ~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~ 456 (501)
T PHA03210 386 SLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPL 456 (501)
T ss_pred hcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChh
Confidence 000000 00 000000 113456788899999999999999999998844
|
|
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=299.05 Aligned_cols=246 Identities=18% Similarity=0.241 Sum_probs=204.0
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCCC
Q 011519 59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPN 137 (484)
Q Consensus 59 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~~ 137 (484)
|.+.+.||.|++|.||++.. .++..+++|++..........+.+|+.+++.++||||+++++++......++++||+++
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~ 81 (253)
T cd05122 2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSG 81 (253)
T ss_pred ceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCC
Confidence 56677889999999999995 47889999999776544567899999999999999999999999999999999999999
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC---CcccC
Q 011519 138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---RSYST 214 (484)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~---~~~~~ 214 (484)
++|.+++... ...+++..+..++.|++.||.|||+. |++|+||+|+||++++++.++|+|||.+...... ....+
T Consensus 82 ~~L~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lh~~-~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~ 159 (253)
T cd05122 82 GSLKDLLKST-NQTLTESQIAYVCKELLKGLEYLHSN-GIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMVG 159 (253)
T ss_pred CcHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHhhcC-CEecCCCCHHHEEEccCCeEEEeeccccccccccccccceec
Confidence 9999999642 25789999999999999999999998 9999999999999999999999999998876554 35567
Q ss_pred CCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHHhc
Q 011519 215 NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ 294 (484)
Q Consensus 215 t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 294 (484)
+..|++||.+.+...+.++||||||+++++|++|+.|+.................... ..+...+..+.+++.+||+
T Consensus 160 ~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~i~~~l~ 236 (253)
T cd05122 160 TPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGPPGL---RNPEKWSDEFKDFLKKCLQ 236 (253)
T ss_pred CCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcCCCCc---CcccccCHHHHHHHHHHcc
Confidence 8899999999888899999999999999999999988765421111111111101000 1111226789999999999
Q ss_pred cCCCCCCChHHHHHH
Q 011519 295 YEPRERPNPRSLVTA 309 (484)
Q Consensus 295 ~dp~~Rps~~~il~~ 309 (484)
.||++|||+.+++.+
T Consensus 237 ~~p~~R~t~~~~l~~ 251 (253)
T cd05122 237 KNPEKRPTAEQLLKH 251 (253)
T ss_pred CChhhCCCHHHHhcC
Confidence 999999999999876
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-39 Score=312.35 Aligned_cols=245 Identities=17% Similarity=0.198 Sum_probs=191.4
Q ss_pred CCCCCceEEEEEe-CCCcEEEEEEecCCCCc--cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCCCCCHHh
Q 011519 66 GEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAK 142 (484)
Q Consensus 66 G~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~~gsL~~ 142 (484)
|.|+||+||++.. .+|+.||||++...... ..+.+.+|+.+++.++||||+++++++..++..++||||+.+++|.+
T Consensus 9 g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~~l~~ 88 (328)
T cd08226 9 GFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYGSANS 88 (328)
T ss_pred cccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCCCHHH
Confidence 4449999999994 57999999998754322 24678899999999999999999999999999999999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-----------Cc
Q 011519 143 HLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----------RS 211 (484)
Q Consensus 143 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~-----------~~ 211 (484)
++.......+++..+..++.||+.||.|||+. |++||||||+|||++.++.++++||+.+...... ..
T Consensus 89 ~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~-~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (328)
T cd08226 89 LLKTYFPEGMSEALIGNILFGALRGLNYLHQN-GYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVYDFPQF 167 (328)
T ss_pred HHHhhcccCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccccccccccc
Confidence 99754445689999999999999999999998 9999999999999999999999999864322110 11
Q ss_pred ccCCCCCCCcccccCC--CCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcccc-----------------------
Q 011519 212 YSTNLAFTPPEYLRTG--RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ----------------------- 266 (484)
Q Consensus 212 ~~~t~~y~aPE~~~~~--~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~----------------------- 266 (484)
..++..|+|||++.+. .++.++|||||||++|+|++|+.||..............
T Consensus 168 ~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (328)
T cd08226 168 STSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQ 247 (328)
T ss_pred ccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccch
Confidence 2245679999999764 478999999999999999999988764321110000000
Q ss_pred ------------------ccccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 267 ------------------TLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 267 ------------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
.+.........+..++..+.+|+.+||..||++|||+.+++++-+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~ 310 (328)
T cd08226 248 SGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAF 310 (328)
T ss_pred hhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHH
Confidence 000001111123346788999999999999999999999998843
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=303.37 Aligned_cols=248 Identities=20% Similarity=0.301 Sum_probs=195.0
Q ss_pred cccccCCCCCCceEEEEEeC----CCcEEEEEEecCCCC--ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCC------c
Q 011519 60 NIVSEHGEKAPNVVYKGKLE----NQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGD------E 127 (484)
Q Consensus 60 ~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~------~ 127 (484)
.+.+.||+|+||.||+|.+. ++..||||++..... ...+++.+|+.+++.++||||+++++++.... .
T Consensus 2 ~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 81 (273)
T cd05074 2 TLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPI 81 (273)
T ss_pred cchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccc
Confidence 45677899999999999842 368899999875432 23567899999999999999999999886532 2
Q ss_pred eEEEEecCCCCCHHhhhccC----CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCc
Q 011519 128 RLLVAEYMPNDTLAKHLFHW----ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLM 203 (484)
Q Consensus 128 ~~lv~Ey~~~gsL~~~l~~~----~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a 203 (484)
.++++||+.+|+|.+++... ....+++..+..++.||+.||.|||+. |++||||||+||++++++.+||+|||++
T Consensus 82 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~-~i~H~dikp~nili~~~~~~kl~dfg~~ 160 (273)
T cd05074 82 PMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK-NFIHRDLAARNCMLNENMTVCVADFGLS 160 (273)
T ss_pred eEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CEeecccchhhEEEcCCCCEEECccccc
Confidence 47899999999999887421 123578999999999999999999998 9999999999999999999999999998
Q ss_pred cccCCC------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCC
Q 011519 204 KNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQ 276 (484)
Q Consensus 204 ~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (484)
+..... ....+++.|++||.+.+..++.++||||||+++|+|++ |..|+............... ....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-----~~~~ 235 (273)
T cd05074 161 KKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKG-----NRLK 235 (273)
T ss_pred ccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcC-----CcCC
Confidence 865432 12234567999999988889999999999999999999 67666443221111111000 0111
Q ss_pred CChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhh
Q 011519 277 FSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL 313 (484)
Q Consensus 277 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~ 313 (484)
.+...+..+.+++.+||+.+|++|||+.+++..|+.+
T Consensus 236 ~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 236 QPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 2234567899999999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-39 Score=308.15 Aligned_cols=240 Identities=17% Similarity=0.238 Sum_probs=197.5
Q ss_pred ccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCCCCCHH
Q 011519 63 SEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLA 141 (484)
Q Consensus 63 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~~gsL~ 141 (484)
..||+|+||.||++.. .++..||||.+..........+.+|+.+++.++||||+++++.+...+..++||||+++++|.
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 105 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 105 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHH
Confidence 4579999999999994 578999999986554444567899999999999999999999999999999999999999999
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----CcccCCCC
Q 011519 142 KHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSYSTNLA 217 (484)
Q Consensus 142 ~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~----~~~~~t~~ 217 (484)
+++. .+.+++..+..++.|++.||.|||+. |++|+||+|+||+++.++.++|+|||++...... ....+++.
T Consensus 106 ~~~~---~~~~~~~~~~~~~~ql~~~l~~lH~~-givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~ 181 (292)
T cd06657 106 DIVT---HTRMNEEQIAAVCLAVLKALSVLHAQ-GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPY 181 (292)
T ss_pred HHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEECCCCCEEEcccccceecccccccccccccCcc
Confidence 9884 34689999999999999999999998 9999999999999999999999999987654332 23567889
Q ss_pred CCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHHhccCC
Q 011519 218 FTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEP 297 (484)
Q Consensus 218 y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 297 (484)
|++||.+.+..++.++|+||||+++|+|++|..|+................... . ......+..+.+++.+||..+|
T Consensus 182 y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~l~~li~~~l~~~P 258 (292)
T cd06657 182 WMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPK-L--KNLHKVSPSLKGFLDRLLVRDP 258 (292)
T ss_pred ccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCCcc-c--CCcccCCHHHHHHHHHHHhCCc
Confidence 999999988888999999999999999999998876432221111111111110 0 0112346779999999999999
Q ss_pred CCCCChHHHHHH
Q 011519 298 RERPNPRSLVTA 309 (484)
Q Consensus 298 ~~Rps~~~il~~ 309 (484)
.+||++.+++.+
T Consensus 259 ~~R~~~~~ll~~ 270 (292)
T cd06657 259 AQRATAAELLKH 270 (292)
T ss_pred ccCcCHHHHhcC
Confidence 999999999987
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-41 Score=347.82 Aligned_cols=240 Identities=17% Similarity=0.203 Sum_probs=201.8
Q ss_pred cCCCCCCceEEEEE-eCCCcEEEEEEecCCCCc--cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCCCCCH
Q 011519 64 EHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTL 140 (484)
Q Consensus 64 ~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~~gsL 140 (484)
.||.|.||.||-|. .++|...|||-++-.... ..+.+.+|+.+|..+.|||+|+++|+-.+.+..+|.||||.+|+|
T Consensus 1242 ~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~~GsL 1321 (1509)
T KOG4645|consen 1242 FIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYCEGGSL 1321 (1509)
T ss_pred ccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHhccCcH
Confidence 45999999999999 788999999988654322 245678999999999999999999999999999999999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC--------Ccc
Q 011519 141 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--------RSY 212 (484)
Q Consensus 141 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~--------~~~ 212 (484)
.+.+. .++..++.....+..|++.|+.|||+. |||||||||.||+++.+|.+|++|||.|....+. ...
T Consensus 1322 a~ll~--~gri~dE~vt~vyt~qll~gla~LH~~-gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~el~~~ 1398 (1509)
T KOG4645|consen 1322 ASLLE--HGRIEDEMVTRVYTKQLLEGLAYLHEH-GIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPGELQSM 1398 (1509)
T ss_pred HHHHH--hcchhhhhHHHHHHHHHHHHHHHHHhc-CceecCCCccceeeecCCcEEeecccceeEecCchhcCCHHHHhh
Confidence 99996 455678888889999999999999998 9999999999999999999999999999876553 256
Q ss_pred cCCCCCCCcccccCCC---CCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHH
Q 011519 213 STNLAFTPPEYLRTGR---VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289 (484)
Q Consensus 213 ~~t~~y~aPE~~~~~~---~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 289 (484)
.||+.|||||++.+.. -..++||||||||++||+||+.|+..-..++ .+.-.+.....+++|..++.+-.+|+
T Consensus 1399 ~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~----aIMy~V~~gh~Pq~P~~ls~~g~dFl 1474 (1509)
T KOG4645|consen 1399 MGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEW----AIMYHVAAGHKPQIPERLSSEGRDFL 1474 (1509)
T ss_pred cCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchh----HHHhHHhccCCCCCchhhhHhHHHHH
Confidence 7999999999998644 5668999999999999999999864322111 11111122233457777999999999
Q ss_pred HHHhccCCCCCCChHHHHHHH
Q 011519 290 SRCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 290 ~~cl~~dp~~Rps~~~il~~l 310 (484)
.+||..||..|.++.+++++-
T Consensus 1475 e~Cl~~dP~~Rw~~~qlle~~ 1495 (1509)
T KOG4645|consen 1475 EHCLEQDPKMRWTASQLLEHA 1495 (1509)
T ss_pred HHHHhcCchhhhHHHHHHHhh
Confidence 999999999999999998873
|
|
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=306.53 Aligned_cols=250 Identities=17% Similarity=0.188 Sum_probs=194.0
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCcc-HHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEec
Q 011519 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD-ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey 134 (484)
..|.+++.||+|+||.||+|. ..+++.||||.+....... ...+.+|+.+++.++|+||+++++++..++..++||||
T Consensus 5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07870 5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEY 84 (291)
T ss_pred ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEec
Confidence 356788889999999999998 4578899999987543322 34678999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----C
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----R 210 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~----~ 210 (484)
+. ++|.+++.. ....+++..+..++.||+.||.|||+. |++|+||||+|||++.++.++|+|||+++..... .
T Consensus 85 ~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~-~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 161 (291)
T cd07870 85 MH-TDLAQYMIQ-HPGGLHPYNVRLFMFQLLRGLAYIHGQ-HILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYS 161 (291)
T ss_pred cc-CCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCChHHEEEcCCCcEEEeccccccccCCCCCCCC
Confidence 95 678777753 234578889999999999999999998 9999999999999999999999999998754322 2
Q ss_pred cccCCCCCCCcccccCC-CCCCCCceeehHHHHHHHhhCCCCCCchhhH--Hhhhc----------------cccccccc
Q 011519 211 SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALD--LIRDR----------------NIQTLTDS 271 (484)
Q Consensus 211 ~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~--~~~~~----------------~~~~~~~~ 271 (484)
...+++.|+|||++.+. .++.++||||||+++|+|+||..||...... ..... ........
T Consensus 162 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (291)
T cd07870 162 SEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPE 241 (291)
T ss_pred CccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccch
Confidence 33468899999998764 4788999999999999999999887532211 00000 00000000
Q ss_pred cccCCCC---------hHHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 272 CLEGQFS---------SDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 272 ~~~~~~~---------~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
......+ ...+..+.+++.+|+..||.+|||+.+++.|
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h 288 (291)
T cd07870 242 WFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLH 288 (291)
T ss_pred hccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcC
Confidence 0000000 0124678999999999999999999999876
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-39 Score=291.75 Aligned_cols=246 Identities=19% Similarity=0.181 Sum_probs=198.8
Q ss_pred ccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCC-CCceeeeeeeeeeCCceEEEEecCCCCCH
Q 011519 63 SEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVAEYMPNDTL 140 (484)
Q Consensus 63 ~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~lv~Ey~~~gsL 140 (484)
+.||+|+|+.|--++ +.+|..+|||++.+.......+..+|++++.+++ |+||++++++|.++...|||||-|.||+|
T Consensus 84 e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGpl 163 (463)
T KOG0607|consen 84 ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPL 163 (463)
T ss_pred HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCchH
Confidence 346999999999999 7899999999998886666788999999999996 99999999999999999999999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCC---CceeeccCCccccCCC--------
Q 011519 141 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV---NPRLSCFGLMKNSRDG-------- 209 (484)
Q Consensus 141 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~---~~kl~DfG~a~~~~~~-------- 209 (484)
.++|. ....|++.++.++..+|+.||.|||.+ ||.||||||+|||-.+-. -||||||.+.......
T Consensus 164 LshI~--~~~~F~E~EAs~vvkdia~aLdFlH~k-gIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spast 240 (463)
T KOG0607|consen 164 LSHIQ--KRKHFNEREASRVVKDIASALDFLHTK-GIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPAST 240 (463)
T ss_pred HHHHH--HhhhccHHHHHHHHHHHHHHHHHHhhc-CcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCCC
Confidence 99997 456799999999999999999999999 999999999999997543 3899999987643211
Q ss_pred ---CcccCCCCCCCccccc---C--CCCCCCCceeehHHHHHHHhhCCCCCCchhhHH--hhhcc-----cccccccccc
Q 011519 210 ---RSYSTNLAFTPPEYLR---T--GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDL--IRDRN-----IQTLTDSCLE 274 (484)
Q Consensus 210 ---~~~~~t~~y~aPE~~~---~--~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~--~~~~~-----~~~~~~~~~~ 274 (484)
.+.+|+-.|||||+.. + ..|+.++|.||||||||-|++|.+||.+.-... |..+. -..+...+..
T Consensus 241 P~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQE 320 (463)
T KOG0607|consen 241 PELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQE 320 (463)
T ss_pred ccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhc
Confidence 2456777899999874 2 238999999999999999999999987542110 00000 0001111111
Q ss_pred --CCCC----hHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 275 --GQFS----SDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 275 --~~~~----~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
.+|| ..++.+..++++.+|..|+.+|.++..+++|.+
T Consensus 321 GkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw 363 (463)
T KOG0607|consen 321 GKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPW 363 (463)
T ss_pred cCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCcc
Confidence 1233 346889999999999999999999999998754
|
|
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-38 Score=306.79 Aligned_cols=250 Identities=19% Similarity=0.226 Sum_probs=201.6
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCC---ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEe
Q 011519 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 133 (484)
.|..++.||.|+||.||+|+ ..++..||||.+..... ...+++.+|+.+++.++|||++++++++......++|||
T Consensus 16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 95 (308)
T cd06634 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME 95 (308)
T ss_pred HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEE
Confidence 35567788999999999999 45688999999864322 224568899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCCccc
Q 011519 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYS 213 (484)
Q Consensus 134 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 213 (484)
|+. |+|.+++.. ...++++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++..........
T Consensus 96 ~~~-~~l~~~~~~-~~~~l~~~~~~~~~~~l~~~l~~LH~~-~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~ 172 (308)
T cd06634 96 YCL-GSASDLLEV-HKKPLQEVEIAAVTHGALQGLAYLHSH-NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV 172 (308)
T ss_pred ccC-CCHHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHhEEECCCCcEEECCcccceeecCccccc
Confidence 996 588887753 345689999999999999999999998 99999999999999999999999999998777666677
Q ss_pred CCCCCCCccccc---CCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHH
Q 011519 214 TNLAFTPPEYLR---TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (484)
Q Consensus 214 ~t~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (484)
+++.|+|||.+. ...++.++|||||||++|+|++|..|+................. ....+...+..+.+|+.
T Consensus 173 ~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~li~ 248 (308)
T cd06634 173 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNES----PALQSGHWSEYFRNFVD 248 (308)
T ss_pred CCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCC----CCcCcccccHHHHHHHH
Confidence 889999999975 34578899999999999999999988754321111111111100 11112345678999999
Q ss_pred HHhccCCCCCCChHHHHHHHHhhh
Q 011519 291 RCLQYEPRERPNPRSLVTALVTLQ 314 (484)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~l~~~~ 314 (484)
+||..+|++||++.+++.+.+...
T Consensus 249 ~cl~~~P~~Rp~~~~ll~~~~~~~ 272 (308)
T cd06634 249 SCLQKIPQDRPTSEVLLKHRFVLR 272 (308)
T ss_pred HHhhCCcccCCCHHHHhhCccccc
Confidence 999999999999999999865443
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-39 Score=307.57 Aligned_cols=251 Identities=19% Similarity=0.205 Sum_probs=196.3
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCc--cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEe
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 133 (484)
.+|++++.||.|++|+||+|.. .+++.||||.+...... ..+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 4678889999999999999994 57889999998654322 24568899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecC-CCCceeeccCCccccCCC---
Q 011519 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-DVNPRLSCFGLMKNSRDG--- 209 (484)
Q Consensus 134 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~-~~~~kl~DfG~a~~~~~~--- 209 (484)
|++ ++|.+++.......+++..+..++.||+.||.|||+. +++|+||+|+||+++. ++.+||+|||++......
T Consensus 82 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~-~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~ 159 (294)
T PLN00009 82 YLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSH-RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRT 159 (294)
T ss_pred ccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCCcceEEEECCCCEEEEcccccccccCCCccc
Confidence 996 5888888654444578889999999999999999999 9999999999999985 567999999998764332
Q ss_pred -CcccCCCCCCCcccccCC-CCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcc-------ccccc----------c
Q 011519 210 -RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN-------IQTLT----------D 270 (484)
Q Consensus 210 -~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~-------~~~~~----------~ 270 (484)
....+++.|+|||++.+. .++.++||||||+++|+|+||..||............ ..... .
T Consensus 160 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (294)
T PLN00009 160 FTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKS 239 (294)
T ss_pred cccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhh
Confidence 234567899999998764 5789999999999999999999887543211110000 00000 0
Q ss_pred cc--ccC----CCChHHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 271 SC--LEG----QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 271 ~~--~~~----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
.. ... ......++.+.+++.+||+.+|++||++.+++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~ 284 (294)
T PLN00009 240 AFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH 284 (294)
T ss_pred hcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00 000 0112346779999999999999999999999987
|
|
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-38 Score=300.53 Aligned_cols=244 Identities=17% Similarity=0.199 Sum_probs=198.4
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCC-----CccHHHHHHHHHHHhcCCCCceeeeeeeeeeC--CceE
Q 011519 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA-----WPDARQFLEEARAVGQLRNRRLANLLGCCCEG--DERL 129 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~--~~~~ 129 (484)
.|++.+.||+|+||.||+|. ..++..||+|.+.... ......+.+|+.++++++||||+++++++.+. ...+
T Consensus 3 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (264)
T cd06653 3 NWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLS 82 (264)
T ss_pred ceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEE
Confidence 45667788999999999999 4578999999875321 12345788999999999999999999998764 4588
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC
Q 011519 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 209 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 209 (484)
+||||+++++|.+++. ..+.+++..+..++.||+.||.|||+. |++|+||||+||+++.++.++|+|||+++.....
T Consensus 83 ~v~e~~~~~~L~~~~~--~~~~l~~~~~~~~~~~i~~al~~LH~~-~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 159 (264)
T cd06653 83 IFVEYMPGGSIKDQLK--AYGALTENVTRRYTRQILQGVSYLHSN-MIVHRDIKGANILRDSAGNVKLGDFGASKRIQTI 159 (264)
T ss_pred EEEEeCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEEcCCCCEEECccccccccccc
Confidence 9999999999999986 334689999999999999999999998 9999999999999999999999999998764321
Q ss_pred -------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHH
Q 011519 210 -------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG 282 (484)
Q Consensus 210 -------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (484)
....++..|+|||++.+..++.++|+|||||++++|++|+.||........ ............++...+
T Consensus 160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~----~~~~~~~~~~~~~p~~~~ 235 (264)
T cd06653 160 CMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAA----IFKIATQPTKPMLPDGVS 235 (264)
T ss_pred cccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHH----HHHHHcCCCCCCCCcccC
Confidence 234578899999999988889999999999999999999988754321111 111111112234566778
Q ss_pred HHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 283 TELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 283 ~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
+.+.+++.+||. +|..||++.+++.|
T Consensus 236 ~~~~~~i~~~l~-~~~~r~~~~~~~~~ 261 (264)
T cd06653 236 DACRDFLKQIFV-EEKRRPTAEFLLRH 261 (264)
T ss_pred HHHHHHHHHHhc-CcccCccHHHHhcC
Confidence 899999999999 57999999998876
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=307.99 Aligned_cols=255 Identities=20% Similarity=0.232 Sum_probs=197.9
Q ss_pred CCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCcc--HHHHHHHHHHHhcCCCCceeeeeeeeeeC--CceE
Q 011519 55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLGCCCEG--DERL 129 (484)
Q Consensus 55 ~f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~hpniv~l~~~~~~~--~~~~ 129 (484)
+.+.|++++.||.|+||.||+|.. .+|+.||+|.++...... ...+.+|+.++++++|+||+++++++... +..+
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIF 84 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEE
Confidence 456788889999999999999994 578999999986543222 33567899999999999999999998754 5689
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC
Q 011519 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 209 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 209 (484)
+||||+.+ +|.+++... ...+++..+..++.||+.||.|||+. |++|+||||+||+++.++.+||+|||++......
T Consensus 85 lv~e~~~~-~l~~~l~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~ 161 (309)
T cd07845 85 LVMEYCEQ-DLASLLDNM-PTPFSESQVKCLMLQLLRGLQYLHEN-FIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLP 161 (309)
T ss_pred EEEecCCC-CHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEECCCCCEEECccceeeecCCc
Confidence 99999965 898888642 35689999999999999999999999 9999999999999999999999999998875532
Q ss_pred ----CcccCCCCCCCcccccC-CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccc-------cccc--------
Q 011519 210 ----RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI-------QTLT-------- 269 (484)
Q Consensus 210 ----~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~-------~~~~-------- 269 (484)
....+++.|+|||.+.+ ..++.++||||||+++|+|++|..||............. ....
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (309)
T cd07845 162 AKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPL 241 (309)
T ss_pred cCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccc
Confidence 12234678999999875 457899999999999999999998876432211110000 0000
Q ss_pred --ccccc-CCC------ChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHh
Q 011519 270 --DSCLE-GQF------SSDEGTELVRLASRCLQYEPRERPNPRSLVTALVT 312 (484)
Q Consensus 270 --~~~~~-~~~------~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~ 312 (484)
..... ... ....++.+.++|.+||+.||++|||+.+++.|-+-
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f 293 (309)
T cd07845 242 VGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYF 293 (309)
T ss_pred cccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhh
Confidence 00000 000 01236788999999999999999999999988554
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-38 Score=303.90 Aligned_cols=247 Identities=17% Similarity=0.208 Sum_probs=193.0
Q ss_pred ccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCc-cHHHHHHHHHHHhcCC-CCceeeeeeeeeeC--CceEEEEe
Q 011519 59 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLR-NRRLANLLGCCCEG--DERLLVAE 133 (484)
Q Consensus 59 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~--~~~~lv~E 133 (484)
|++++.||+|+||.||+|. ..+++.||+|+++..... ......+|+.++.++. ||||+++++++.+. +..++|||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 4677889999999999999 557889999998754322 2334568999999985 99999999999887 88999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC---C
Q 011519 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---R 210 (484)
Q Consensus 134 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~---~ 210 (484)
|++ |+|.+++.. ....+++..+..++.|++.||.|||+. |++|+||||+||+++. +.+||+|||++...... .
T Consensus 81 ~~~-~~l~~~l~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~-~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~~~ 156 (282)
T cd07831 81 LMD-MNLYELIKG-RKRPLPEKRVKSYMYQLLKSLDHMHRN-GIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPPYT 156 (282)
T ss_pred cCC-ccHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHC-CceecccCHHHEEEcC-CCeEEEecccccccccCCCcC
Confidence 996 588888864 235689999999999999999999999 9999999999999999 99999999998865432 2
Q ss_pred cccCCCCCCCcccccC-CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcc-------cc---------ccccccc
Q 011519 211 SYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN-------IQ---------TLTDSCL 273 (484)
Q Consensus 211 ~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~-------~~---------~~~~~~~ 273 (484)
...++..|+|||++.+ +.++.++|||||||++|||++|..||+........... .. .......
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (282)
T cd07831 157 EYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNF 236 (282)
T ss_pred CCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccC
Confidence 3457889999997654 45788999999999999999999888643211100000 00 0000000
Q ss_pred cC-------CCChHHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 274 EG-------QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 274 ~~-------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
.. ......+..+.+|+.+||..+|++|||+.+++.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 279 (282)
T cd07831 237 PSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH 279 (282)
T ss_pred cccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence 00 0112356889999999999999999999999986
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-38 Score=305.80 Aligned_cols=244 Identities=19% Similarity=0.219 Sum_probs=197.3
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCc---cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEec
Q 011519 59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (484)
Q Consensus 59 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey 134 (484)
+..+++||.|+||+||+|+. .++..|++|++...... ....+.+|+.+++.++|||++++++++.+....++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 34456789999999999994 57889999998654322 245688999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCCcccC
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST 214 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 214 (484)
+. |+|.+++.. ...++++..+..++.||+.||.|||+. |++|+||+|+||+++.++.+||+|||++..........+
T Consensus 103 ~~-~~l~~~l~~-~~~~l~~~~~~~~~~qi~~al~~LH~~-gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~~~~~~ 179 (313)
T cd06633 103 CL-GSASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSH-NMIHRDIKAGNILLTEPGQVKLADFGSASKSSPANSFVG 179 (313)
T ss_pred CC-CCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCChhhEEECCCCCEEEeecCCCcccCCCCCccc
Confidence 96 578887753 345689999999999999999999998 999999999999999999999999999877665566778
Q ss_pred CCCCCCccccc---CCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHH
Q 011519 215 NLAFTPPEYLR---TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291 (484)
Q Consensus 215 t~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 291 (484)
+..|+|||++. ...++.++||||||+++|+|++|..|+................. ........+..+.+|+.+
T Consensus 180 ~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~li~~ 255 (313)
T cd06633 180 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDS----PTLQSNEWTDSFRGFVDY 255 (313)
T ss_pred cccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCC----CCCCccccCHHHHHHHHH
Confidence 89999999984 35588899999999999999999988754321111111110000 111122345679999999
Q ss_pred HhccCCCCCCChHHHHHH
Q 011519 292 CLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 292 cl~~dp~~Rps~~~il~~ 309 (484)
||+.+|.+||++.+++.+
T Consensus 256 ~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 256 CLQKIPQERPASAELLRH 273 (313)
T ss_pred HccCChhhCcCHHHHhcC
Confidence 999999999999999977
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-38 Score=296.91 Aligned_cols=243 Identities=19% Similarity=0.267 Sum_probs=203.6
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCC--ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecC
Q 011519 59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 59 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~ 135 (484)
|.+.+.||.|++|.||+++. .+++.|+||.+..... .....+.+|++++++++|||++++++++...+..++||||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (254)
T cd06627 2 YQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYA 81 (254)
T ss_pred ceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecC
Confidence 56678889999999999984 4688999999977654 34567999999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCC----c
Q 011519 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----S 211 (484)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~----~ 211 (484)
++++|.+++.. ...+++..+..++.|++.||.|||+. |++|+||||+||+++.++.++|+|||++....... .
T Consensus 82 ~~~~L~~~~~~--~~~l~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~ 158 (254)
T cd06627 82 ENGSLRQIIKK--FGPFPESLVAVYVYQVLQGLAYLHEQ-GVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDAS 158 (254)
T ss_pred CCCcHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHhhC-CcccCCCCHHHEEECCCCCEEEeccccceecCCCcccccc
Confidence 99999999963 36799999999999999999999998 99999999999999999999999999988765433 3
Q ss_pred ccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHH
Q 011519 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291 (484)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 291 (484)
..++..|+|||...+...+.++||||||+++++|++|..|+............. ......++...+..+.+++.+
T Consensus 159 ~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~ 233 (254)
T cd06627 159 VVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIV-----QDDHPPLPEGISPELKDFLMQ 233 (254)
T ss_pred cccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHh-----ccCCCCCCCCCCHHHHHHHHH
Confidence 467889999999988778999999999999999999998875432111110100 011123445567889999999
Q ss_pred HhccCCCCCCChHHHHHH
Q 011519 292 CLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 292 cl~~dp~~Rps~~~il~~ 309 (484)
||..+|++|||+.+++.+
T Consensus 234 ~l~~~p~~R~~~~~~l~~ 251 (254)
T cd06627 234 CFQKDPNLRPTAKQLLKH 251 (254)
T ss_pred HHhCChhhCcCHHHHhcC
Confidence 999999999999999864
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-38 Score=298.44 Aligned_cols=245 Identities=20% Similarity=0.244 Sum_probs=205.8
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCC--ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecC
Q 011519 59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 59 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~ 135 (484)
|.+++.||.|+||.||++.. .++..|++|++..... ...+.+.+|+++++.++|||++++++.+...+..++|+||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~ 81 (258)
T cd08215 2 YEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYA 81 (258)
T ss_pred ceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEec
Confidence 56778889999999999994 4688999999976543 34567899999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCC--CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCC---
Q 011519 136 PNDTLAKHLFHWE--TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR--- 210 (484)
Q Consensus 136 ~~gsL~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~--- 210 (484)
++++|.+++.... +..+++..+..++.+++.||.|||+. |++|+||+|+||+++.++.++|+|||++.......
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~-~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~ 160 (258)
T cd08215 82 DGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR-KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLA 160 (258)
T ss_pred CCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC-CEecccCChHHeEEcCCCcEEECCccceeecccCccee
Confidence 9999999997532 46799999999999999999999998 99999999999999999999999999987754432
Q ss_pred -cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHH
Q 011519 211 -SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289 (484)
Q Consensus 211 -~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 289 (484)
...+++.|+|||.+.+..++.++|+||||+++++|++|..|+................ ....+...+..+.+++
T Consensus 161 ~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~i 235 (258)
T cd08215 161 KTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQ-----YPPIPSQYSSELRNLV 235 (258)
T ss_pred cceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCC-----CCCCCCCCCHHHHHHH
Confidence 3457788999999988889999999999999999999998875443222221111111 1223445678899999
Q ss_pred HHHhccCCCCCCChHHHHHH
Q 011519 290 SRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 290 ~~cl~~dp~~Rps~~~il~~ 309 (484)
.+||..+|++|||+.+++++
T Consensus 236 ~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 236 SSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred HHHcCCChhhCcCHHHHhcC
Confidence 99999999999999999876
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=304.69 Aligned_cols=249 Identities=18% Similarity=0.238 Sum_probs=196.6
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCc--cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecC
Q 011519 59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 59 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~ 135 (484)
|++++.||.|++|.||+|.. .+|..||||++...... ..+.+.+|+++++.++||||+++++++...+..++||||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 45678889999999999994 57999999998754322 2356889999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----Cc
Q 011519 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RS 211 (484)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~----~~ 211 (484)
+ ++|.+++.......+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++...... ..
T Consensus 81 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~-~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~ 158 (283)
T cd07835 81 D-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSH-RVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTH 158 (283)
T ss_pred C-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccccCc
Confidence 5 6999998654434689999999999999999999998 9999999999999999999999999998764322 22
Q ss_pred ccCCCCCCCcccccCC-CCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcc--------------cccc---cccc-
Q 011519 212 YSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN--------------IQTL---TDSC- 272 (484)
Q Consensus 212 ~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~--------------~~~~---~~~~- 272 (484)
..++..|+|||++.+. .++.++||||||+++|+|++|+.||............ ...+ ....
T Consensus 159 ~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (283)
T cd07835 159 EVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFP 238 (283)
T ss_pred cccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcc
Confidence 3457889999988764 4788999999999999999999887543211100000 0000 0000
Q ss_pred -----ccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 273 -----LEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 273 -----~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
.........+..+.+++.+||+.||.+|||+.+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 280 (283)
T cd07835 239 KWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH 280 (283)
T ss_pred cccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 0001123345789999999999999999999999876
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-38 Score=301.36 Aligned_cols=240 Identities=19% Similarity=0.190 Sum_probs=190.4
Q ss_pred CCCCCCceEEEEE-eCCCcEEEEEEecCCCCcc---HHHHHHHHH---HHhcCCCCceeeeeeeeeeCCceEEEEecCCC
Q 011519 65 HGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD---ARQFLEEAR---AVGQLRNRRLANLLGCCCEGDERLLVAEYMPN 137 (484)
Q Consensus 65 lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~---~~~~~~E~~---~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~~ 137 (484)
||+|+||.||++. ..+++.||+|++....... ...+..|.. +++...||||+.+++++...+..++||||++|
T Consensus 2 ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~g 81 (278)
T cd05606 2 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNG 81 (278)
T ss_pred cccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCCC
Confidence 6999999999999 4568899999987543221 223444444 34445799999999999999999999999999
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC--CCcccCC
Q 011519 138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD--GRSYSTN 215 (484)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~--~~~~~~t 215 (484)
|+|.+++. ..+.+++..+..++.|++.||.|||+. +++||||||+||+++.++.++|+|||++..... .....|+
T Consensus 82 ~~L~~~l~--~~~~l~~~~~~~~~~ql~~~l~~lH~~-~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 158 (278)
T cd05606 82 GDLHYHLS--QHGVFSEAEMRFYAAEIILGLEHMHNR-FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGT 158 (278)
T ss_pred CcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CEEcCCCCHHHEEECCCCCEEEccCcCccccCccCCcCcCCC
Confidence 99999886 345799999999999999999999998 999999999999999999999999999875433 2345688
Q ss_pred CCCCCcccccCC-CCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHHhc
Q 011519 216 LAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ 294 (484)
Q Consensus 216 ~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 294 (484)
..|+|||++.++ .++.++||||||+++|+|++|+.||.......... ..... ......++...+..+.+++.+||.
T Consensus 159 ~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~--~~~~~-~~~~~~~~~~~s~~~~~li~~~l~ 235 (278)
T cd05606 159 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE--IDRMT-LTMAVELPDSFSPELRSLLEGLLQ 235 (278)
T ss_pred cCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHH--HHHHh-hccCCCCCCcCCHHHHHHHHHHhh
Confidence 999999999754 58999999999999999999998876431111000 00000 001122344557899999999999
Q ss_pred cCCCCCC-----ChHHHHHHH
Q 011519 295 YEPRERP-----NPRSLVTAL 310 (484)
Q Consensus 295 ~dp~~Rp-----s~~~il~~l 310 (484)
.+|.+|| ++.+++++-
T Consensus 236 ~~p~~R~~~~~~~~~~ll~~~ 256 (278)
T cd05606 236 RDVNRRLGCLGRGAQEVKEHP 256 (278)
T ss_pred cCHHhccCCCCCCHHHHHhCc
Confidence 9999999 999999774
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-38 Score=312.77 Aligned_cols=249 Identities=15% Similarity=0.198 Sum_probs=196.4
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCC--CccHHHHHHHHHHHhcCCCCceeeeeeeeeeC------Cc
Q 011519 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEG------DE 127 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~------~~ 127 (484)
..|.+++.||+|+||.||+|. ..+++.||||.+.... ......+.+|+.++++++||||+++++++... ..
T Consensus 16 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 95 (353)
T cd07850 16 KRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQD 95 (353)
T ss_pred cceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccCc
Confidence 567788889999999999999 4578999999986432 22345688999999999999999999988643 35
Q ss_pred eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccC
Q 011519 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 207 (484)
Q Consensus 128 ~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~ 207 (484)
.++||||+.+ +|.+.+.. .+++..+..++.|++.||.|||+. |++||||||+||+++.++.+||+|||+++...
T Consensus 96 ~~lv~e~~~~-~l~~~~~~----~l~~~~~~~~~~ql~~aL~~LH~~-gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~ 169 (353)
T cd07850 96 VYLVMELMDA-NLCQVIQM----DLDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 169 (353)
T ss_pred EEEEEeccCC-CHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCCHHHEEECCCCCEEEccCccceeCC
Confidence 7999999964 88888752 289999999999999999999998 99999999999999999999999999998754
Q ss_pred CC---CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcc--------------------
Q 011519 208 DG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN-------------------- 264 (484)
Q Consensus 208 ~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~-------------------- 264 (484)
.. ....++..|+|||.+.+..++.++|||||||++|+|++|+.||............
T Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (353)
T cd07850 170 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVR 249 (353)
T ss_pred CCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhh
Confidence 43 2345788999999999888999999999999999999999887643210000000
Q ss_pred -------------ccccccccc----cCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 265 -------------IQTLTDSCL----EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 265 -------------~~~~~~~~~----~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
...+..... ....+...+..+.+++.+||+.||++|||+.+++.+-+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~ 313 (353)
T cd07850 250 NYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPY 313 (353)
T ss_pred HHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChh
Confidence 000000000 00012234677899999999999999999999998843
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-38 Score=297.10 Aligned_cols=245 Identities=18% Similarity=0.225 Sum_probs=203.2
Q ss_pred ccccccCCCCCCceEEEEEeC-CCcEEEEEEecCCCC--ccHHHHHHHHHHHhcCCCCceeeeeeeeeeC--CceEEEEe
Q 011519 59 ENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEG--DERLLVAE 133 (484)
Q Consensus 59 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~--~~~~lv~E 133 (484)
|.+.+.||+|++|.||+|... +++.|++|++..... ...+.+.+|+.++++++||||+++++.+... ...++|+|
T Consensus 2 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 81 (260)
T cd06606 2 WTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLE 81 (260)
T ss_pred ceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEE
Confidence 445567799999999999954 789999999876543 2356789999999999999999999999988 88999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCC---
Q 011519 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR--- 210 (484)
Q Consensus 134 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~--- 210 (484)
|+++++|.+++.. ...+++..++.++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||.+.......
T Consensus 82 ~~~~~~L~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~-~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~ 158 (260)
T cd06606 82 YVSGGSLSSLLKK--FGKLPEPVIRKYTRQILEGLAYLHSN-GIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGE 158 (260)
T ss_pred ecCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEEcCCCCEEEcccccEEecccccccc
Confidence 9999999999974 33799999999999999999999998 99999999999999999999999999988765432
Q ss_pred ---cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHH
Q 011519 211 ---SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287 (484)
Q Consensus 211 ---~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (484)
...++..|++||.+.+...+.++||||||+++++|++|..|+......... .............+...+..+.+
T Consensus 159 ~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~ 235 (260)
T cd06606 159 GTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAA---LYKIGSSGEPPEIPEHLSEEAKD 235 (260)
T ss_pred cccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHH---HHhccccCCCcCCCcccCHHHHH
Confidence 346778999999998888999999999999999999999887654211100 01111111122344555789999
Q ss_pred HHHHHhccCCCCCCChHHHHHH
Q 011519 288 LASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 288 li~~cl~~dp~~Rps~~~il~~ 309 (484)
++.+||..||++||++.+++.+
T Consensus 236 ~i~~~l~~~p~~Rp~~~~ll~~ 257 (260)
T cd06606 236 FLRKCLRRDPKKRPTADELLQH 257 (260)
T ss_pred HHHHhCcCChhhCCCHHHHhhC
Confidence 9999999999999999999986
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-38 Score=306.78 Aligned_cols=250 Identities=16% Similarity=0.176 Sum_probs=193.7
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCc--cHHHHHHHHHHHhcCC-CCceeeeeeeeeeCCc-----e
Q 011519 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLR-NRRLANLLGCCCEGDE-----R 128 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~-----~ 128 (484)
+|++.+.||.|+||.||+|.. .+++.||||.+...... ....+.+|+.+++.++ ||||+++++++...+. .
T Consensus 2 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~ 81 (295)
T cd07837 2 AYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSL 81 (295)
T ss_pred CceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceE
Confidence 466778889999999999994 57899999998654322 2456889999999995 6999999999887665 8
Q ss_pred EEEEecCCCCCHHhhhccCC---CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecC-CCCceeeccCCcc
Q 011519 129 LLVAEYMPNDTLAKHLFHWE---TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-DVNPRLSCFGLMK 204 (484)
Q Consensus 129 ~lv~Ey~~~gsL~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~-~~~~kl~DfG~a~ 204 (484)
++||||+++ +|.+++.... ...+++..++.++.||+.||.|||+. |++||||||+||+++. ++.+||+|||++.
T Consensus 82 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~-~i~H~dl~~~nil~~~~~~~~kl~dfg~~~ 159 (295)
T cd07837 82 YLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH-GVMHRDLKPQNLLVDKQKGLLKIADLGLGR 159 (295)
T ss_pred EEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCChHHEEEecCCCeEEEeecccce
Confidence 999999986 8988885422 34689999999999999999999999 9999999999999998 8999999999987
Q ss_pred ccCCC----CcccCCCCCCCcccccC-CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcccc-------cc----
Q 011519 205 NSRDG----RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ-------TL---- 268 (484)
Q Consensus 205 ~~~~~----~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~-------~~---- 268 (484)
..... ....+++.|+|||.+.+ ..++.++||||||+++|+|++|..||.............. ..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (295)
T cd07837 160 AFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGV 239 (295)
T ss_pred ecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcch
Confidence 54322 22356788999998865 4478999999999999999999988764321111000000 00
Q ss_pred ---cc--------ccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 269 ---TD--------SCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 269 ---~~--------~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
.. +.......+..+..+.++|.+||..||.+|||+.+++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~ 291 (295)
T cd07837 240 SKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH 291 (295)
T ss_pred hhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 00 000000112356789999999999999999999999876
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-38 Score=298.49 Aligned_cols=245 Identities=16% Similarity=0.238 Sum_probs=204.3
Q ss_pred ccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCC--ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecC
Q 011519 59 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 59 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~ 135 (484)
|++++.||.|+||.||++. ..++..++||.+..... .....+.+|+.+++.++||||+++++++......++||||+
T Consensus 2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (256)
T cd08530 2 FKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYA 81 (256)
T ss_pred ceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhc
Confidence 5677888999999999998 55788999999875432 22456889999999999999999999999999999999999
Q ss_pred CCCCHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC--Cc
Q 011519 136 PNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--RS 211 (484)
Q Consensus 136 ~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~--~~ 211 (484)
++++|.+++.+. .+..+++..++.++.|++.||.|||+. |++|+||+|+||++++++.+||+|||++...... ..
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~-~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~ 160 (256)
T cd08530 82 PFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ-KILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAKT 160 (256)
T ss_pred CCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC-CcccCCCCcceEEEecCCcEEEeeccchhhhccCCccc
Confidence 999999998642 235689999999999999999999999 9999999999999999999999999998776543 23
Q ss_pred ccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHH
Q 011519 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291 (484)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 291 (484)
..+++.|++||.+.+..++.++|+||||+++++|++|+.|+............... .....+...+.++.+++.+
T Consensus 161 ~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~ 235 (256)
T cd08530 161 QIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRG-----KYPPIPPIYSQDLQNFIRS 235 (256)
T ss_pred ccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC-----CCCCCchhhCHHHHHHHHH
Confidence 45778999999999888999999999999999999999887654332222111111 1122344567889999999
Q ss_pred HhccCCCCCCChHHHHHH
Q 011519 292 CLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 292 cl~~dp~~Rps~~~il~~ 309 (484)
||..+|++|||+.+++++
T Consensus 236 ~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 236 MLQVKPKLRPNCDKILAS 253 (256)
T ss_pred HcCCCcccCCCHHHHhcC
Confidence 999999999999999876
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-38 Score=303.95 Aligned_cols=249 Identities=17% Similarity=0.235 Sum_probs=197.0
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCC
Q 011519 59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (484)
Q Consensus 59 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~ 136 (484)
|++++.||.|++|.||+|+. .+|..||||+++..... ....+.+|+.++++++||||+++++++...+..++||||++
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 81 (284)
T cd07836 2 FKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYMD 81 (284)
T ss_pred ceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecCC
Confidence 57788899999999999995 56889999999765432 34567899999999999999999999999999999999997
Q ss_pred CCCHHhhhccCC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----Cc
Q 011519 137 NDTLAKHLFHWE-TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RS 211 (484)
Q Consensus 137 ~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~----~~ 211 (484)
+ +|.+++.... ...+++..+..++.||+.||.|||+. |++|+||||+||++++++.++|+|||++...... ..
T Consensus 82 ~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~ 159 (284)
T cd07836 82 K-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN-RVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFSN 159 (284)
T ss_pred c-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcccccc
Confidence 5 8998886432 34689999999999999999999998 9999999999999999999999999998754332 23
Q ss_pred ccCCCCCCCcccccCC-CCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccc-----------------cccccccc
Q 011519 212 YSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI-----------------QTLTDSCL 273 (484)
Q Consensus 212 ~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~-----------------~~~~~~~~ 273 (484)
..++..|++||++.+. .++.++||||||+++|+|++|+.||............. ........
T Consensus 160 ~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (284)
T cd07836 160 EVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFP 239 (284)
T ss_pred ccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhccccc
Confidence 4567889999998764 46889999999999999999998875432111100000 00000000
Q ss_pred ------cCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 274 ------EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 274 ------~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
.....+..+..+.+++.+||+.||.+||++.+++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 281 (284)
T cd07836 240 RYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQH 281 (284)
T ss_pred CCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 001112346788999999999999999999999875
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-38 Score=310.45 Aligned_cols=248 Identities=17% Similarity=0.249 Sum_probs=195.9
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCC--CccHHHHHHHHHHHhcCCCCceeeeeeeeeeC-----CceE
Q 011519 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEG-----DERL 129 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-----~~~~ 129 (484)
.|.+++.||.|+||+||+|+ ..+++.||||.+.... ......+.+|+.+++.++||||+++++++... ...+
T Consensus 6 ~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~ 85 (337)
T cd07858 6 KYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVY 85 (337)
T ss_pred ceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcEE
Confidence 56778888999999999999 5678999999987532 22345678999999999999999999988654 3479
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC
Q 011519 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 209 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 209 (484)
+|+||+. ++|.+++. ..+.+++..+..++.||+.||.|||+. +++|+||||+||+++.++.+||+|||++......
T Consensus 86 lv~e~~~-~~L~~~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~-~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~ 161 (337)
T cd07858 86 IVYELMD-TDLHQIIR--SSQTLSDDHCQYFLYQLLRGLKYIHSA-NVLHRDLKPSNLLLNANCDLKICDFGLARTTSEK 161 (337)
T ss_pred EEEeCCC-CCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEEcCCCCEEECcCccccccCCC
Confidence 9999995 68999886 345799999999999999999999998 9999999999999999999999999998875443
Q ss_pred ----CcccCCCCCCCcccccC-CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhh-------------------hccc
Q 011519 210 ----RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIR-------------------DRNI 265 (484)
Q Consensus 210 ----~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~-------------------~~~~ 265 (484)
....++..|+|||.+.+ ..++.++|||||||++|+|++|+.||......... ....
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (337)
T cd07858 162 GDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKA 241 (337)
T ss_pred cccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhh
Confidence 23457889999998865 45889999999999999999999887543110000 0000
Q ss_pred ccccc---cccc---CCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 266 QTLTD---SCLE---GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 266 ~~~~~---~~~~---~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
..... .... .......+..+.+++.+||+.+|++|||+.+++.|
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h 291 (337)
T cd07858 242 RRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAH 291 (337)
T ss_pred hHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence 00000 0000 00123456789999999999999999999999999
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-39 Score=330.96 Aligned_cols=254 Identities=17% Similarity=0.156 Sum_probs=211.1
Q ss_pred HHHHhcCCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCC---CccHHHHHHHHHHHhcCCCCceeeeeeeeee
Q 011519 49 LRTATSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCE 124 (484)
Q Consensus 49 ~~~~~~~f~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 124 (484)
++...-+-++|+|++.||+|+||.|..++ ..+++.||+|++++-. ..+..-|..|-++|..-..+.||+++-.|++
T Consensus 67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD 146 (1317)
T KOG0612|consen 67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQD 146 (1317)
T ss_pred HHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcC
Confidence 33344444667888899999999999999 4678999999997632 2234458899999999999999999999999
Q ss_pred CCceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCcc
Q 011519 125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK 204 (484)
Q Consensus 125 ~~~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~ 204 (484)
..++|+||||++||+|..++.+.. ++++..+..++..|+-||.-||+. |+|||||||+|||||..|++||+|||.+-
T Consensus 147 ~~~LYlVMdY~pGGDlltLlSk~~--~~pE~~ArFY~aEiVlAldslH~m-gyVHRDiKPDNvLld~~GHikLADFGsCl 223 (1317)
T KOG0612|consen 147 ERYLYLVMDYMPGGDLLTLLSKFD--RLPEDWARFYTAEIVLALDSLHSM-GYVHRDIKPDNVLLDKSGHIKLADFGSCL 223 (1317)
T ss_pred ccceEEEEecccCchHHHHHhhcC--CChHHHHHHHHHHHHHHHHHHHhc-cceeccCCcceeEecccCcEeeccchhHH
Confidence 999999999999999999997433 799999999999999999999999 99999999999999999999999999887
Q ss_pred ccCC-C----CcccCCCCCCCccccc----C-CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcccccccccccc
Q 011519 205 NSRD-G----RSYSTNLAFTPPEYLR----T-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLE 274 (484)
Q Consensus 205 ~~~~-~----~~~~~t~~y~aPE~~~----~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 274 (484)
.... + ...+|||-|++||++. + +.|++.+|.||+||++|||+.|..||+.+..-......+.. .. .
T Consensus 224 km~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~h-k~---~ 299 (1317)
T KOG0612|consen 224 KMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNH-KE---S 299 (1317)
T ss_pred hcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhch-hh---h
Confidence 6653 2 4568999999999986 2 56999999999999999999999999987655444433322 11 1
Q ss_pred CCCC--hHHHHHHHHHHHHHhccCCCCCCC---hHHHHHHH
Q 011519 275 GQFS--SDEGTELVRLASRCLQYEPRERPN---PRSLVTAL 310 (484)
Q Consensus 275 ~~~~--~~~~~~l~~li~~cl~~dp~~Rps---~~~il~~l 310 (484)
-.|| ..+++++.+||.+.+ .+|+.|.. ++++-.|.
T Consensus 300 l~FP~~~~VSeeakdLI~~ll-~~~e~RLgrngiedik~Hp 339 (1317)
T KOG0612|consen 300 LSFPDETDVSEEAKDLIEALL-CDREVRLGRNGIEDIKNHP 339 (1317)
T ss_pred cCCCcccccCHHHHHHHHHHh-cChhhhcccccHHHHHhCc
Confidence 1233 447899999999887 57888887 99999884
|
|
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=312.78 Aligned_cols=248 Identities=17% Similarity=0.255 Sum_probs=193.5
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCC-ccHHHHHHHHHHHhcCCCCceeeeeeeeeeC-----CceE
Q 011519 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEG-----DERL 129 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-----~~~~ 129 (484)
.+|.+++.||+|+||.||+|+ ..+|+.||||++..... .....+.+|+.+++.++||||+++++++... ...+
T Consensus 5 ~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 84 (336)
T cd07849 5 PRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVY 84 (336)
T ss_pred cceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEE
Confidence 357788889999999999999 56789999999864322 2345688999999999999999999987544 3579
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC
Q 011519 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 209 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 209 (484)
+|+||+.+ +|.+++. ...+++..+..++.|++.||.|||+. |++||||||+||+++.++.+||+|||++......
T Consensus 85 lv~e~~~~-~l~~~~~---~~~l~~~~~~~i~~ql~~aL~~LH~~-~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~ 159 (336)
T cd07849 85 IVQELMET-DLYKLIK---TQHLSNDHIQYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTNCDLKICDFGLARIADPE 159 (336)
T ss_pred EEehhccc-CHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHEEECCCCCEEECcccceeecccc
Confidence 99999965 8888874 45699999999999999999999999 9999999999999999999999999998765332
Q ss_pred -------CcccCCCCCCCcccccC-CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhh-----------ccccccc-
Q 011519 210 -------RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD-----------RNIQTLT- 269 (484)
Q Consensus 210 -------~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~-----------~~~~~~~- 269 (484)
....+|+.|+|||.+.+ ..++.++|||||||++|+|++|+.||.......... .....+.
T Consensus 160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (336)
T cd07849 160 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIIS 239 (336)
T ss_pred ccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhc
Confidence 22457889999998764 458899999999999999999998875432110000 0000000
Q ss_pred -------ccccc-CC-----CChHHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 270 -------DSCLE-GQ-----FSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 270 -------~~~~~-~~-----~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
..... .. ..+..+.++.+++.+||+.||.+|||+.+++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 240 LRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred hhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00000 00 012245779999999999999999999999998
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-38 Score=307.98 Aligned_cols=249 Identities=16% Similarity=0.219 Sum_probs=193.8
Q ss_pred ccccccCCCCCCceEEEEEe-C--CCcEEEEEEecCCC---CccHHHHHHHHHHHhcCCCCceeeeeeeeeeC--CceEE
Q 011519 59 ENIVSEHGEKAPNVVYKGKL-E--NQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEG--DERLL 130 (484)
Q Consensus 59 ~~~~~~lG~G~~g~Vy~~~~-~--~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~--~~~~l 130 (484)
|++++.||+|+||.||+|.. . ++..||||.+.... ....+.+.+|+.++..++||||+++++++... ...++
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 81 (316)
T cd07842 2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYL 81 (316)
T ss_pred ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEE
Confidence 56778899999999999995 4 57899999997633 22346688999999999999999999999888 78999
Q ss_pred EEecCCCCCHHhhhccC---CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecC----CCCceeeccCCc
Q 011519 131 VAEYMPNDTLAKHLFHW---ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD----DVNPRLSCFGLM 203 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~~---~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~----~~~~kl~DfG~a 203 (484)
||||+++ +|.+++... ....+++..++.++.||+.||.|||+. +++||||||+||+++. ++.+||+|||++
T Consensus 82 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~ 159 (316)
T cd07842 82 LFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN-WVLHRDLKPANILVMGEGPERGVVKIGDLGLA 159 (316)
T ss_pred EEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC-CEeeCCCCHHHEEEcCCCCccceEEECCCccc
Confidence 9999965 777776432 223689999999999999999999999 9999999999999998 899999999998
Q ss_pred cccCCC-------CcccCCCCCCCcccccCC-CCCCCCceeehHHHHHHHhhCCCCCCchhhHHh-----h----h----
Q 011519 204 KNSRDG-------RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLI-----R----D---- 262 (484)
Q Consensus 204 ~~~~~~-------~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~-----~----~---- 262 (484)
...... ....+++.|+|||++.+. .++.++||||||+++++|++|..|+........ . .
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (316)
T cd07842 160 RLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFE 239 (316)
T ss_pred cccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHH
Confidence 865332 234567889999988764 478999999999999999999988754321110 0 0
Q ss_pred ----------------ccccccccccccCCCC-----------hHHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 263 ----------------RNIQTLTDSCLEGQFS-----------SDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 263 ----------------~~~~~~~~~~~~~~~~-----------~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
.......+......++ ...+..+.+++.+||+.||++|||+.+++.+
T Consensus 240 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~ 313 (316)
T cd07842 240 VLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEH 313 (316)
T ss_pred HhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 0000000000000111 0345678999999999999999999999876
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-38 Score=301.66 Aligned_cols=248 Identities=21% Similarity=0.246 Sum_probs=196.1
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCC--CccHHHHHHHHHHHhcCCCCceeeeeeeeeeC--CceEEEEe
Q 011519 59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEG--DERLLVAE 133 (484)
Q Consensus 59 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~--~~~~lv~E 133 (484)
|++++.||.|+||.||+|+. .++..||||.+.... ......+.+|+.+++.++|||++++++++... +..++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 46778899999999999995 468899999998653 22345688999999999999999999999888 88999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCC---
Q 011519 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR--- 210 (484)
Q Consensus 134 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~--- 210 (484)
|+++ +|.+++... ...+++..++.++.||+.||.|||+. |++|+||||+||++++++.++|+|||++.......
T Consensus 81 ~~~~-~l~~~~~~~-~~~~~~~~~~~i~~~i~~al~~LH~~-~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~ 157 (287)
T cd07840 81 YMDH-DLTGLLDSP-EVKFTESQIKCYMKQLLEGLQYLHSN-GILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSAD 157 (287)
T ss_pred cccc-cHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCcHHHeEEcCCCCEEEccccceeeccCCCccc
Confidence 9975 899988642 25789999999999999999999998 99999999999999999999999999988665432
Q ss_pred --cccCCCCCCCcccccCC-CCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcccc-----------cccc------
Q 011519 211 --SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ-----------TLTD------ 270 (484)
Q Consensus 211 --~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~-----------~~~~------ 270 (484)
...++..|+|||.+.+. .++.++||||||+++|+|+||+.|+.............. ....
T Consensus 158 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (287)
T cd07840 158 YTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFEN 237 (287)
T ss_pred ccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhh
Confidence 23457789999987653 478999999999999999999988754322111100000 0000
Q ss_pred --------ccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 271 --------SCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 271 --------~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
......+...++..+.+++.+||..+|.+||++.+++.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 284 (287)
T cd07840 238 LKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH 284 (287)
T ss_pred ccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 000000111136789999999999999999999999876
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-38 Score=303.33 Aligned_cols=247 Identities=13% Similarity=0.071 Sum_probs=183.6
Q ss_pred CcccccccCCCCCCceEEEEEeC-C---CcEEEEEEecCCCCcc-H----------HHHHHHHHHHhcCCCCceeeeeee
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLE-N---QFRIAVKRFNRSAWPD-A----------RQFLEEARAVGQLRNRRLANLLGC 121 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~-~---~~~vavK~~~~~~~~~-~----------~~~~~E~~~l~~l~hpniv~l~~~ 121 (484)
.+|.+.+.||+|+||+||+|... + +..+|+|+........ . .....+...+..+.|+||++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 46888899999999999999953 3 4566777643322111 0 112334445667789999999997
Q ss_pred eeeCC----ceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCcee
Q 011519 122 CCEGD----ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRL 197 (484)
Q Consensus 122 ~~~~~----~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl 197 (484)
+.... ..++++|++.. ++.+.+.. ....++..+..++.|++.||.|||+. +++||||||+|||++.++.++|
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~-~iiHrDiKp~Nill~~~~~~~l 167 (294)
T PHA02882 92 GSFKRCRMYYRFILLEKLVE-NTKEIFKR--IKCKNKKLIKNIMKDMLTTLEYIHEH-GISHGDIKPENIMVDGNNRGYI 167 (294)
T ss_pred eeEecCCceEEEEEEehhcc-CHHHHHHh--hccCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCCcEEE
Confidence 65543 34788888744 67777642 23467888999999999999999999 9999999999999999999999
Q ss_pred eccCCccccCC-----------CCcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhh-H-Hhh---
Q 011519 198 SCFGLMKNSRD-----------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL-D-LIR--- 261 (484)
Q Consensus 198 ~DfG~a~~~~~-----------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~-~-~~~--- 261 (484)
+|||+++.... .....||+.|+|||++.+..++.++|||||||+++||++|+.||..... . ...
T Consensus 168 ~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~ 247 (294)
T PHA02882 168 IDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAK 247 (294)
T ss_pred EEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhH
Confidence 99999876421 1234689999999999988899999999999999999999988864411 1 000
Q ss_pred hccccccccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHH
Q 011519 262 DRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 310 (484)
......+.... ......+..+.+++..||..+|++||++.++++.|
T Consensus 248 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 248 CDFIKRLHEGK---IKIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred HHHHHHhhhhh---hccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 00111111111 01233467899999999999999999999999875
|
|
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-38 Score=308.95 Aligned_cols=248 Identities=19% Similarity=0.286 Sum_probs=199.4
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCC--CccHHHHHHHHHHHhcCCCCceeeeeeeeeeCC-----ceE
Q 011519 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGD-----ERL 129 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~-----~~~ 129 (484)
+|++.+.||.|+||.||+|.. .++..||||++.... ....+.+.+|+.+++.++||||+++++++.... ..+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 367778899999999999995 458999999987643 233567999999999999999999999988765 789
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC
Q 011519 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 209 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 209 (484)
+||||+++ +|.+++. ....+++..+..++.||+.||.|||+. |++|+||||+|||++.++.++|+|||++......
T Consensus 81 lv~e~~~~-~l~~~l~--~~~~l~~~~~~~i~~~l~~~l~~LH~~-gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~ 156 (330)
T cd07834 81 IVTELMET-DLHKVIK--SPQPLTDDHIQYFLYQILRGLKYLHSA-NVIHRDLKPSNILVNSNCDLKICDFGLARGVDPD 156 (330)
T ss_pred EEecchhh-hHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCCCEEEcccCceEeeccc
Confidence 99999974 8999986 344799999999999999999999998 9999999999999999999999999998876543
Q ss_pred C-------cccCCCCCCCcccccCC-CCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcccc---------------
Q 011519 210 R-------SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ--------------- 266 (484)
Q Consensus 210 ~-------~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~--------------- 266 (484)
. ...++..|+|||++.+. .++.++|+||||+++|+|++|..||..............
T Consensus 157 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 236 (330)
T cd07834 157 EDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITS 236 (330)
T ss_pred ccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccc
Confidence 2 34567889999999887 789999999999999999999988865422111000000
Q ss_pred ----cccc------ccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 267 ----TLTD------SCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 267 ----~~~~------~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
.... ...........+..+.+++.+||+.+|.+|||+.+++.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 289 (330)
T cd07834 237 EKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAH 289 (330)
T ss_pred cchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 0000 000000112346789999999999999999999999988
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-38 Score=298.67 Aligned_cols=236 Identities=20% Similarity=0.228 Sum_probs=193.9
Q ss_pred CCCCCCceEEEEEeC-CCcEEEEEEecCCCC---ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCCCCCH
Q 011519 65 HGEKAPNVVYKGKLE-NQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTL 140 (484)
Q Consensus 65 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~~gsL 140 (484)
||.|+||.||++... +++.|++|.+..... ...+.+.+|+.++++++||||+++++.+......++||||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 589999999999965 589999999976543 2355788999999999999999999999999999999999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-----------
Q 011519 141 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----------- 209 (484)
Q Consensus 141 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~----------- 209 (484)
.+++.+ .+.+++..+..++.||+.||.|||+. +++|+||+|+||+++.++.++|+|||++......
T Consensus 81 ~~~l~~--~~~~~~~~~~~i~~qi~~~L~~lH~~-~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~ 157 (265)
T cd05579 81 ASLLEN--VGSLDEDVARIYIAEIVLALEYLHSN-GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKE 157 (265)
T ss_pred HHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHc-CeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccccccc
Confidence 999974 34789999999999999999999998 9999999999999999999999999998754332
Q ss_pred -CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChH--HHHHHH
Q 011519 210 -RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD--EGTELV 286 (484)
Q Consensus 210 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~ 286 (484)
....++..|++||.+.+...+.++||||||+++++|++|..|+................. .++.. .+..+.
T Consensus 158 ~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 231 (265)
T cd05579 158 DKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKI------EWPEDVEVSDEAI 231 (265)
T ss_pred ccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCc------CCCccccCCHHHH
Confidence 223567889999999888889999999999999999999988764432222111111000 11222 268899
Q ss_pred HHHHHHhccCCCCCCCh---HHHHHH
Q 011519 287 RLASRCLQYEPRERPNP---RSLVTA 309 (484)
Q Consensus 287 ~li~~cl~~dp~~Rps~---~~il~~ 309 (484)
+++.+||+.+|.+|||+ .+++++
T Consensus 232 ~~i~~~l~~~p~~Rpt~~~~~~~l~~ 257 (265)
T cd05579 232 DLISKLLVPDPEKRLGAKSIEEIKNH 257 (265)
T ss_pred HHHHHHhcCCHhhcCCCccHHHHhcC
Confidence 99999999999999999 555543
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-38 Score=305.25 Aligned_cols=242 Identities=18% Similarity=0.210 Sum_probs=188.9
Q ss_pred CCceEEEEE-eCCCcEEEEEEecCC--CCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCCCCCHHhhhc
Q 011519 69 APNVVYKGK-LENQFRIAVKRFNRS--AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLF 145 (484)
Q Consensus 69 ~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~~gsL~~~l~ 145 (484)
++|.||.++ ..+++.||||+++.. .....+.+.+|+.+++.++||||+++++++...+..+++|||+++|+|.+++.
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~ 91 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLK 91 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHHH
Confidence 345555555 337889999999754 22345679999999999999999999999999999999999999999999997
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-----------CcccC
Q 011519 146 HWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----------RSYST 214 (484)
Q Consensus 146 ~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~-----------~~~~~ 214 (484)
......+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||.+...... ....+
T Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~L~~LH~~-~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (314)
T cd08216 92 THFPEGLPELAIAFILKDVLNALDYIHSK-GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVK 170 (314)
T ss_pred HhcccCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCcceEEEecCCceEEecCccceeeccccccccccccccccccc
Confidence 54455689999999999999999999999 9999999999999999999999999987643221 22345
Q ss_pred CCCCCCcccccCC--CCCCCCceeehHHHHHHHhhCCCCCCchhhHHh--h--hccccccc-------------------
Q 011519 215 NLAFTPPEYLRTG--RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLI--R--DRNIQTLT------------------- 269 (484)
Q Consensus 215 t~~y~aPE~~~~~--~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~--~--~~~~~~~~------------------- 269 (484)
+..|+|||++.+. .++.++|||||||++|+|++|..||........ . ........
T Consensus 171 ~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (314)
T cd08216 171 NLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSN 250 (314)
T ss_pred cccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCcccccc
Confidence 6789999998763 488999999999999999999988764311100 0 00000000
Q ss_pred -----cccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 270 -----DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 270 -----~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
............+.++.+|+..||..||++|||+.+++++-.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~ 297 (314)
T cd08216 251 EHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSF 297 (314)
T ss_pred cccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCch
Confidence 000011123345678999999999999999999999999843
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-38 Score=302.76 Aligned_cols=252 Identities=19% Similarity=0.264 Sum_probs=197.4
Q ss_pred CCCcccccccCCCCCCceEEEEEeC-CCcEEEEEEecCCCCc-cHHHHHHHHHHHhcCC-CCceeeeeeeeeeCCceEEE
Q 011519 55 GFAMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLV 131 (484)
Q Consensus 55 ~f~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~lv 131 (484)
.+..+.+++.||.|+||.||+|... +++.||||.++..... ....+..|+.++..+. ||||+++++++......++|
T Consensus 13 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v 92 (296)
T cd06618 13 DLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFIC 92 (296)
T ss_pred CcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEE
Confidence 4567788899999999999999965 4889999999765432 3455777888777775 99999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC--
Q 011519 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 209 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~-- 209 (484)
|||+. ++|.+++.. ....+++..+..++.||+.||.|||+..|++||||+|+||++++++.+||+|||++......
T Consensus 93 ~e~~~-~~l~~l~~~-~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~ 170 (296)
T cd06618 93 MELMS-TCLDKLLKR-IQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKA 170 (296)
T ss_pred eeccC-cCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhccCCCc
Confidence 99985 478877754 23479999999999999999999997449999999999999999999999999998765432
Q ss_pred -CcccCCCCCCCcccccCCC----CCCCCceeehHHHHHHHhhCCCCCCchhhHH-hhhccccccccccccCCCChHHHH
Q 011519 210 -RSYSTNLAFTPPEYLRTGR----VTPESVMYSFGTLLLDLLSGKHIPPSHALDL-IRDRNIQTLTDSCLEGQFSSDEGT 283 (484)
Q Consensus 210 -~~~~~t~~y~aPE~~~~~~----~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 283 (484)
....+++.|+|||.+.+.. ++.++||||||+++|+|++|+.||....... ........... ........+.
T Consensus 171 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 247 (296)
T cd06618 171 KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPP---SLPPNEGFSP 247 (296)
T ss_pred ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCC---CCCCCCCCCH
Confidence 2234678899999987553 7889999999999999999998875421110 00000110000 0011123467
Q ss_pred HHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 284 ELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 284 ~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
++.+|+.+||..||++||++.+++.+.+
T Consensus 248 ~l~~li~~~l~~~p~~Rp~~~~il~~~~ 275 (296)
T cd06618 248 DFCSFVDLCLTKDHRKRPKYRELLQHPF 275 (296)
T ss_pred HHHHHHHHHccCChhhCCCHHHHhcChh
Confidence 8999999999999999999999998854
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-38 Score=304.17 Aligned_cols=251 Identities=18% Similarity=0.221 Sum_probs=192.0
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCc--cHHHHHHHHHHHhcCCCCceeeeeeeeeeCC------
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGD------ 126 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~------ 126 (484)
...|++++.||+|+||.||+|.. .+++.||||.+...... ....+.+|+.++++++||||+++++++....
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 45678889999999999999994 57899999998643322 2345678999999999999999999987654
Q ss_pred --ceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCcc
Q 011519 127 --ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK 204 (484)
Q Consensus 127 --~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~ 204 (484)
..++||||+.+ +|.+++.. ....+++.+++.++.||+.||.|||+. |++|+||||+||+++.++.+||+|||++.
T Consensus 91 ~~~~~lv~e~~~~-~l~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~-~i~H~dl~p~nil~~~~~~~kl~dfg~~~ 167 (310)
T cd07865 91 KGSFYLVFEFCEH-DLAGLLSN-KNVKFTLSEIKKVMKMLLNGLYYIHRN-KILHRDMKAANILITKDGILKLADFGLAR 167 (310)
T ss_pred CceEEEEEcCCCc-CHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHEEECCCCcEEECcCCCcc
Confidence 35999999965 88888853 334689999999999999999999998 99999999999999999999999999987
Q ss_pred ccCCCC--------cccCCCCCCCcccccCCC-CCCCCceeehHHHHHHHhhCCCCCCchhhHHhhh-------cccccc
Q 011519 205 NSRDGR--------SYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD-------RNIQTL 268 (484)
Q Consensus 205 ~~~~~~--------~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~-------~~~~~~ 268 (484)
...... ...++..|+|||.+.+.. ++.++||||||+++|+|+||..|+.......... .....+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (310)
T cd07865 168 AFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEV 247 (310)
T ss_pred cccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhh
Confidence 653321 234578899999887643 7889999999999999999998775432111000 000000
Q ss_pred cccc----------ccCC----C-----ChHHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 269 TDSC----------LEGQ----F-----SSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 269 ~~~~----------~~~~----~-----~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
.+.. .... . +...+..+.+||.+||..||.+|||+.++++|
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h 307 (310)
T cd07865 248 WPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH 307 (310)
T ss_pred cccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence 0000 0000 0 01124567899999999999999999999976
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-38 Score=309.37 Aligned_cols=251 Identities=16% Similarity=0.249 Sum_probs=196.2
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCC--ccHHHHHHHHHHHhcCCCCceeeeeeeeee----CCceEE
Q 011519 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCE----GDERLL 130 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~----~~~~~l 130 (484)
.|.+.+.||.|+||.||+|+ ..++..||+|++..... .....+.+|+.+|+.++||||+++++++.. ....++
T Consensus 6 ~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 85 (334)
T cd07855 6 RYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYV 85 (334)
T ss_pred ceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEEE
Confidence 45677788999999999999 55789999999875432 235678899999999999999999998753 346899
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-
Q 011519 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 209 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~- 209 (484)
||||+. |+|.+++. ....+++..+..++.||+.||.|||+. +++||||||+||++++++.+||+|||++......
T Consensus 86 v~e~~~-~~l~~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 161 (334)
T cd07855 86 VMDLME-SDLHHIIH--SDQPLTEEHIRYFLYQLLRGLKYIHSA-NVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSP 161 (334)
T ss_pred EEehhh-hhHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEEcCCCcEEecccccceeecccC
Confidence 999995 58999986 345699999999999999999999998 9999999999999999999999999998764322
Q ss_pred -------CcccCCCCCCCcccccC-CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHh----h---------------h
Q 011519 210 -------RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLI----R---------------D 262 (484)
Q Consensus 210 -------~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~----~---------------~ 262 (484)
....++..|+|||.+.+ ..++.++||||||+++|+|++|+.||........ . .
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 241 (334)
T cd07855 162 TEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGS 241 (334)
T ss_pred cCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhch
Confidence 13467889999999865 4588999999999999999999988854321100 0 0
Q ss_pred cccccccccc-ccCC-----CChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHh
Q 011519 263 RNIQTLTDSC-LEGQ-----FSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVT 312 (484)
Q Consensus 263 ~~~~~~~~~~-~~~~-----~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~ 312 (484)
.......... .... .....+.++.+++.+||+.+|.+|||+.+++.+.+-
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~ 297 (334)
T cd07855 242 DRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFL 297 (334)
T ss_pred hhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhh
Confidence 0000000000 0000 112346889999999999999999999999998543
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-38 Score=301.59 Aligned_cols=248 Identities=19% Similarity=0.249 Sum_probs=199.1
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCc--cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecC
Q 011519 59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 59 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~ 135 (484)
|++++.||.|++|.||++.. .+++.+++|.+...... ....+.+|+.++++++||||+++++++..++..++||||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 46678899999999999994 57899999998765433 3567889999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCC----c
Q 011519 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----S 211 (484)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~----~ 211 (484)
++ +|.+++.. ....+++..+..++.||+.||.|||+. +++|+||||+||+++.++.++|+|||.+....... .
T Consensus 81 ~~-~l~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~-~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~~~ 157 (283)
T cd05118 81 DT-DLYKLIKD-RQRGLPESLIKSYLYQLLQGLAFCHSH-GILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTH 157 (283)
T ss_pred CC-CHHHHHHh-hcccCCHHHHHHHHHHHHHHHHHHHHC-CeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccccC
Confidence 75 89888864 235799999999999999999999998 99999999999999999999999999987665432 3
Q ss_pred ccCCCCCCCcccccCC-CCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcc-----------cccccc---------
Q 011519 212 YSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN-----------IQTLTD--------- 270 (484)
Q Consensus 212 ~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~-----------~~~~~~--------- 270 (484)
..++..|+|||.+.+. ..+.++||||||+++|+|+||+.||+........... ......
T Consensus 158 ~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (283)
T cd05118 158 YVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSF 237 (283)
T ss_pred ccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhh
Confidence 4567889999999876 6899999999999999999999887543211100000 000000
Q ss_pred --c--cccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 271 --S--CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 271 --~--~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
. ..........+.++.+++.+||+.||.+||++.+++.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~ 280 (283)
T cd05118 238 PKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH 280 (283)
T ss_pred ccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 0 00001123457889999999999999999999999876
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-38 Score=301.07 Aligned_cols=243 Identities=21% Similarity=0.244 Sum_probs=201.6
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCC---ccHHHHHHHHHHHhcCC-CCceeeeeeeeeeCCceEEEE
Q 011519 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVA 132 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~lv~ 132 (484)
+|.+.+.||.|+||.||++.. .++..||+|++..... ...+.+.+|+.++++++ ||||+++++++...+..++||
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~ 81 (280)
T cd05581 2 DFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVL 81 (280)
T ss_pred CceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEE
Confidence 567778899999999999994 5789999999875322 22456889999999998 999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCC--
Q 011519 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-- 210 (484)
Q Consensus 133 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~-- 210 (484)
||+++++|.+++.. .+.+++..++.++.|++.||.|||+. |++|+||+|+||+++.++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~l~~--~~~l~~~~~~~i~~ql~~~l~~Lh~~-~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~ 158 (280)
T cd05581 82 EYAPNGELLQYIRK--YGSLDEKCTRFYAAEILLALEYLHSK-GIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSP 158 (280)
T ss_pred cCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCHHHeEECCCCCEEecCCccccccCCcccc
Confidence 99999999999963 44799999999999999999999998 99999999999999999999999999987644321
Q ss_pred ----------------------cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcccccc
Q 011519 211 ----------------------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL 268 (484)
Q Consensus 211 ----------------------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~ 268 (484)
...++..|+|||++.+..++.++||||||++++++++|..|+.............
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~--- 235 (280)
T cd05581 159 ESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKIL--- 235 (280)
T ss_pred ccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHH---
Confidence 2345788999999988889999999999999999999998876443211111111
Q ss_pred ccccccCCCChHHHHHHHHHHHHHhccCCCCCCCh----HHHHHH
Q 011519 269 TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNP----RSLVTA 309 (484)
Q Consensus 269 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~----~~il~~ 309 (484)
.....++...++.+.+|+.+||+.+|.+|||+ .+++.|
T Consensus 236 ---~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~ 277 (280)
T cd05581 236 ---KLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAH 277 (280)
T ss_pred ---hcCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcC
Confidence 11123445557889999999999999999999 888776
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-37 Score=298.35 Aligned_cols=249 Identities=19% Similarity=0.217 Sum_probs=194.8
Q ss_pred ccccccCCCCCCceEEEEEeC-CCcEEEEEEecCCCCcc--HHHHHHHHHHHhcC---CCCceeeeeeeeeeCCc-----
Q 011519 59 ENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPD--ARQFLEEARAVGQL---RNRRLANLLGCCCEGDE----- 127 (484)
Q Consensus 59 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l---~hpniv~l~~~~~~~~~----- 127 (484)
|++++.||.|+||.||+|+.. ++..||||+++...... ...+.+|+.++.++ .||||+++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 456778899999999999964 58999999997543222 34566788877666 59999999999988776
Q ss_pred eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccC
Q 011519 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 207 (484)
Q Consensus 128 ~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~ 207 (484)
.+++|||+++ +|.+++.......+++..++.++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++....
T Consensus 81 ~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~-~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~ 158 (287)
T cd07838 81 LTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSH-RIVHRDLKPQNILVTSDGQVKIADFGLARIYS 158 (287)
T ss_pred eEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeccCChhhEEEccCCCEEEeccCcceecc
Confidence 9999999975 899988654444699999999999999999999998 99999999999999999999999999987754
Q ss_pred CC---CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcccccc----------------
Q 011519 208 DG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL---------------- 268 (484)
Q Consensus 208 ~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~---------------- 268 (484)
.. ....++..|+|||++.+..++.++|||||||++|+|++|..|+................
T Consensus 159 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (287)
T cd07838 159 FEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPR 238 (287)
T ss_pred CCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccch
Confidence 33 23346788999999998889999999999999999999987775432211110000000
Q ss_pred --cccccc---CCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 269 --TDSCLE---GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 269 --~~~~~~---~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
...... .......+..+.+++.+||+.||.+||++.+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~ 284 (287)
T cd07838 239 SSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH 284 (287)
T ss_pred hhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence 000000 11122456788999999999999999999999875
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-38 Score=306.63 Aligned_cols=248 Identities=21% Similarity=0.283 Sum_probs=192.9
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCC--CccHHHHHHHHHHHhcC-CCCceeeeeeeeeeC--CceEE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQL-RNRRLANLLGCCCEG--DERLL 130 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~--~~~~l 130 (484)
..|.+.+.||.|+||.||+|.. .+++.||||++.... ......+.+|+.+++++ +||||+++++++... ...++
T Consensus 7 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~l 86 (337)
T cd07852 7 RKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYL 86 (337)
T ss_pred hHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEE
Confidence 3567778889999999999995 468899999885432 22345678899999999 999999999998653 36899
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-
Q 011519 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 209 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~- 209 (484)
||||++ ++|.+++.. +.+++..+..++.||+.||.|||+. |++|+||||+||+++.++.+||+|||++......
T Consensus 87 v~e~~~-~~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~-~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~ 161 (337)
T cd07852 87 VFEYME-TDLHAVIRA---NILEDVHKRYIMYQLLKALKYIHSG-NVIHRDLKPSNILLNSDCRVKLADFGLARSLSELE 161 (337)
T ss_pred Eecccc-cCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEEcCCCcEEEeeccchhcccccc
Confidence 999997 599999853 3789999999999999999999998 9999999999999999999999999998764332
Q ss_pred --------CcccCCCCCCCcccccC-CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhc-----------------
Q 011519 210 --------RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR----------------- 263 (484)
Q Consensus 210 --------~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~----------------- 263 (484)
....++..|+|||.+.+ ..++.++||||||+++|+|+||+.||...........
T Consensus 162 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (337)
T cd07852 162 ENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIK 241 (337)
T ss_pred ccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHH
Confidence 12457889999998865 4578899999999999999999988754321110000
Q ss_pred --cccccccccc------cCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 264 --NIQTLTDSCL------EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 264 --~~~~~~~~~~------~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
....+..... ........+.++.+++.+||+.||++|||+.+++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 242 SPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred hhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 0000000000 001112256789999999999999999999999987
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=311.60 Aligned_cols=243 Identities=19% Similarity=0.200 Sum_probs=204.5
Q ss_pred CCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCccHHHHHHHHHHHhcC-CCCceeeeeeeeeeCCceEEEE
Q 011519 55 GFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVA 132 (484)
Q Consensus 55 ~f~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~ 132 (484)
.+..|++..++|.|+|+.|-.+. ..+++..+||++.+.. .+-.+|+.++... +||||+++.+.+.++.+.|+||
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~ 395 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVM 395 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecCCceeeeee
Confidence 36788888999999999999998 5678899999997652 2234677666666 6999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceee-cCCCCceeeccCCccccCCCC-
Q 011519 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF-DDDVNPRLSCFGLMKNSRDGR- 210 (484)
Q Consensus 133 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill-~~~~~~kl~DfG~a~~~~~~~- 210 (484)
|++.||-|.+.+.. ...+. ..+..|+.+|+.|+.|||++ |+|||||||+|||+ ++.++++|+|||.++......
T Consensus 396 e~l~g~ell~ri~~--~~~~~-~e~~~w~~~lv~Av~~LH~~-gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~~ 471 (612)
T KOG0603|consen 396 ELLDGGELLRRIRS--KPEFC-SEASQWAAELVSAVDYLHEQ-GVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERSCD 471 (612)
T ss_pred hhccccHHHHHHHh--cchhH-HHHHHHHHHHHHHHHHHHhc-CeeecCCChhheeecCCCCcEEEEEechhhhCchhhc
Confidence 99999999888852 22233 77888999999999999998 99999999999999 689999999999998877662
Q ss_pred cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHH
Q 011519 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (484)
Q Consensus 211 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (484)
+.+-|..|.|||++....+++++|+||||++||+|++|+.|+.....+ .++......+.+...++..+++|+.
T Consensus 472 tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~-------~ei~~~i~~~~~s~~vS~~AKdLl~ 544 (612)
T KOG0603|consen 472 TPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG-------IEIHTRIQMPKFSECVSDEAKDLLQ 544 (612)
T ss_pred ccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch-------HHHHHhhcCCccccccCHHHHHHHH
Confidence 335678999999999889999999999999999999999998765443 1222222334455777899999999
Q ss_pred HHhccCCCCCCChHHHHHHHHh
Q 011519 291 RCLQYEPRERPNPRSLVTALVT 312 (484)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~l~~ 312 (484)
+||+.||.+||++.++..|-+.
T Consensus 545 ~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 545 QLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred HhccCChhhCcChhhhccCcch
Confidence 9999999999999999998665
|
|
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-39 Score=290.17 Aligned_cols=254 Identities=15% Similarity=0.213 Sum_probs=197.4
Q ss_pred CCcccccccCCCCCCceEEEEEeC---C--CcEEEEEEecCCCCcc--HHHHHHHHHHHhcCCCCceeeeeeeeee-CCc
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKLE---N--QFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLGCCCE-GDE 127 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~~---~--~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~hpniv~l~~~~~~-~~~ 127 (484)
...|++++.||+|.||.||+|... + ...+|||+++.....+ .....+|+.+++.++||||+.+..+|.. +..
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~ 102 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKK 102 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCce
Confidence 457899999999999999999732 2 2379999997653322 3457899999999999999999999987 778
Q ss_pred eEEEEecCCCCCHHhhhccC---CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCC----CCceeecc
Q 011519 128 RLLVAEYMPNDTLAKHLFHW---ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD----VNPRLSCF 200 (484)
Q Consensus 128 ~~lv~Ey~~~gsL~~~l~~~---~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~----~~~kl~Df 200 (484)
+++++||.+. +|..+|+.+ ..+.++...+..|+.||+.|+.|||++ -|+||||||.|||+..+ |.|||+||
T Consensus 103 v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N-WvlHRDLKPaNIlvmgdgperG~VKIaDl 180 (438)
T KOG0666|consen 103 VWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN-WVLHRDLKPANILVMGDGPERGRVKIADL 180 (438)
T ss_pred EEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh-heeeccCCcceEEEeccCCccCeeEeecc
Confidence 9999999977 899999643 335789999999999999999999998 89999999999999877 99999999
Q ss_pred CCccccCCC-------CcccCCCCCCCcccccCCC-CCCCCceeehHHHHHHHhhCCCCCCchhhHHhhh----------
Q 011519 201 GLMKNSRDG-------RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD---------- 262 (484)
Q Consensus 201 G~a~~~~~~-------~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~---------- 262 (484)
|+++...+. ...+.|+.|.|||.+.|.. ||.+.|||+.|||..||+|-.+.|.+...+....
T Consensus 181 GlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~r 260 (438)
T KOG0666|consen 181 GLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDR 260 (438)
T ss_pred cHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHH
Confidence 999986653 3455689999999999855 9999999999999999999887664331111000
Q ss_pred -------------cccccc------ccccccCCC-C----------hHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 263 -------------RNIQTL------TDSCLEGQF-S----------SDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 263 -------------~~~~~~------~~~~~~~~~-~----------~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
..+..+ ........+ + ..-++...+|+.++|..||-+|.|+++.+++.-
T Consensus 261 If~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~y 339 (438)
T KOG0666|consen 261 IFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPY 339 (438)
T ss_pred HHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcccc
Confidence 000000 000000000 0 001244789999999999999999999999843
|
|
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-38 Score=300.82 Aligned_cols=246 Identities=17% Similarity=0.222 Sum_probs=196.4
Q ss_pred ccccccCCCCCCceEEEEEe----CCCcEEEEEEecCCCC----ccHHHHHHHHHHHhcC-CCCceeeeeeeeeeCCceE
Q 011519 59 ENIVSEHGEKAPNVVYKGKL----ENQFRIAVKRFNRSAW----PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL 129 (484)
Q Consensus 59 ~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~ 129 (484)
|++.+.||.|+||.||++.. .+|..||+|+++.... ...+.+.+|+.++.++ +|+||+++++.+..+...+
T Consensus 2 y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (290)
T cd05613 2 FELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLH 81 (290)
T ss_pred ceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEE
Confidence 56778889999999999984 3688999999875322 2245688999999999 5999999999999989999
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC
Q 011519 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 209 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 209 (484)
+||||+++++|.+++.. ...+++..+..++.|++.||.|||+. |++||||||+|||++.++.+||+|||++......
T Consensus 82 lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~al~~lH~~-~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 158 (290)
T cd05613 82 LILDYINGGELFTHLSQ--RERFKEQEVQIYSGEIVLALEHLHKL-GIIYRDIKLENILLDSNGHVVLTDFGLSKEFHED 158 (290)
T ss_pred EEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHeEECCCCCEEEeeCccceecccc
Confidence 99999999999999963 45689999999999999999999998 9999999999999999999999999998765432
Q ss_pred -----CcccCCCCCCCcccccCC--CCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHH
Q 011519 210 -----RSYSTNLAFTPPEYLRTG--RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG 282 (484)
Q Consensus 210 -----~~~~~t~~y~aPE~~~~~--~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (484)
....++..|+|||.+.+. .++.++||||||+++|+|++|..|+.................. ....++...+
T Consensus 159 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 236 (290)
T cd05613 159 EVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILK--SEPPYPQEMS 236 (290)
T ss_pred cccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhc--cCCCCCccCC
Confidence 234578899999998753 4678999999999999999999887532110000000000100 0112344567
Q ss_pred HHHHHHHHHHhccCCCCCC-----ChHHHHHH
Q 011519 283 TELVRLASRCLQYEPRERP-----NPRSLVTA 309 (484)
Q Consensus 283 ~~l~~li~~cl~~dp~~Rp-----s~~~il~~ 309 (484)
+.+.+++.+||+.||++|| ++.+++.+
T Consensus 237 ~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~ 268 (290)
T cd05613 237 ALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH 268 (290)
T ss_pred HHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence 8899999999999999997 77777776
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-37 Score=344.82 Aligned_cols=244 Identities=25% Similarity=0.417 Sum_probs=196.4
Q ss_pred ccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCCCCCHH
Q 011519 63 SEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLA 141 (484)
Q Consensus 63 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~~gsL~ 141 (484)
..||+|+||.||+|.. .++..||||.+...... ...|+..+++++|||||++++++.+.+..++||||+++|+|.
T Consensus 696 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~ 771 (968)
T PLN00113 696 NVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLS 771 (968)
T ss_pred cEEccCCCeeEEEEEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHH
Confidence 4459999999999995 67899999998754321 235688999999999999999999999999999999999999
Q ss_pred hhhccCCCCCCCHHHHHHHHHHHHHHHHHhh---cCCCcccccccccceeecCCCCceeeccCCccccCCCCcccCCCCC
Q 011519 142 KHLFHWETQPMKWAMRLRVALHIAEALEYCT---SKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAF 218 (484)
Q Consensus 142 ~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH---~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~t~~y 218 (484)
++++ .++|..+..|+.||+.||.||| +. +++||||||+||+++.++.+++. ||............+|+.|
T Consensus 772 ~~l~-----~l~~~~~~~i~~~ia~~L~yLH~~~~~-~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~~~~~~t~~y 844 (968)
T PLN00113 772 EVLR-----NLSWERRRKIAIGIAKALRFLHCRCSP-AVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTDTKCFISSAY 844 (968)
T ss_pred HHHh-----cCCHHHHHHHHHHHHHHHHHhccCCCC-CeecCCCCHHhEEECCCCceEEE-eccccccccCCCccccccc
Confidence 9995 3899999999999999999999 55 89999999999999998888876 7766554444455788999
Q ss_pred CCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhh------HHhh----hccccccccccccC--CCChHHHHHHH
Q 011519 219 TPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL------DLIR----DRNIQTLTDSCLEG--QFSSDEGTELV 286 (484)
Q Consensus 219 ~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~------~~~~----~~~~~~~~~~~~~~--~~~~~~~~~l~ 286 (484)
+|||++.+..++.++|||||||++|||+||+.|+..... .... ......+.++.... ..+.....++.
T Consensus 845 ~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (968)
T PLN00113 845 VAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVM 924 (968)
T ss_pred cCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHH
Confidence 999999988999999999999999999999988743210 0000 11112222222221 22345566788
Q ss_pred HHHHHHhccCCCCCCChHHHHHHHHhhhcCC
Q 011519 287 RLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (484)
Q Consensus 287 ~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 317 (484)
+++.+||+.||++|||+.++++.|+.+.+..
T Consensus 925 ~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~~ 955 (968)
T PLN00113 925 NLALHCTATDPTARPCANDVLKTLESASRSS 955 (968)
T ss_pred HHHHhhCcCCchhCcCHHHHHHHHHHhhccc
Confidence 9999999999999999999999999876543
|
|
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-38 Score=299.05 Aligned_cols=249 Identities=16% Similarity=0.274 Sum_probs=195.8
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCc-cHHHHHHHHHHHhcCC-CCceeeeeeeeeeCCceEEEEecC
Q 011519 59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 59 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~lv~Ey~ 135 (484)
|.+++.||.|+||+||+|+. .+++.|+||++...... ......+|+..+.+++ ||||+++++++..++..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 45678889999999999995 45889999998754322 2334567999999998 999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC---Ccc
Q 011519 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---RSY 212 (484)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~---~~~ 212 (484)
+|+|.+++....+..+++..+..++.|++.+|.|||+. +++|+||+|+||++++++.++|+|||++...... ...
T Consensus 81 -~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~-~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~ 158 (283)
T cd07830 81 -EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKH-GFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPYTDY 158 (283)
T ss_pred -CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCChhhEEEcCCCCEEEeecccceeccCCCCcCCC
Confidence 78999998754445789999999999999999999998 9999999999999999999999999998866543 234
Q ss_pred cCCCCCCCcccccC-CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhc---------------------ccccccc
Q 011519 213 STNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR---------------------NIQTLTD 270 (484)
Q Consensus 213 ~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~---------------------~~~~~~~ 270 (484)
.++..|+|||++.+ ..++.++|+||||+++++|++|+.||+.......... .......
T Consensus 159 ~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (283)
T cd07830 159 VSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFP 238 (283)
T ss_pred CCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcccccccc
Confidence 57888999998854 4478999999999999999999988754321110000 0000000
Q ss_pred cccc---CCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 271 SCLE---GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 271 ~~~~---~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
.... .......+..+.+++.+||+.+|++|||+.+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 239 QFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred ccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 0000 00011125789999999999999999999999876
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-38 Score=307.33 Aligned_cols=262 Identities=15% Similarity=0.223 Sum_probs=199.3
Q ss_pred HHHHHHh-cCCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCc--cHHHHHHHHHHHhcCCCCceeeeeeee
Q 011519 47 ETLRTAT-SGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCC 122 (484)
Q Consensus 47 ~~~~~~~-~~f~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~ 122 (484)
+++..++ .-..+|.++..||.|+||.||+|+ ..+|+.||||++...... ....+.+|+.+++.++||||+++++++
T Consensus 4 ~~~~~~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~ 83 (342)
T cd07879 4 EEVNKTVWELPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVF 83 (342)
T ss_pred hhhhhhhhccccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhhee
Confidence 3444443 223567788889999999999999 457899999998753221 245688999999999999999999998
Q ss_pred eeCC------ceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCce
Q 011519 123 CEGD------ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPR 196 (484)
Q Consensus 123 ~~~~------~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~k 196 (484)
.... ..++|+||+.+ +|..++ +..+++..+..++.|++.||.|||+. +++||||||+||+++.++.+|
T Consensus 84 ~~~~~~~~~~~~~lv~e~~~~-~l~~~~----~~~~~~~~~~~~~~qi~~aL~~LH~~-~i~H~dlkp~NIll~~~~~~k 157 (342)
T cd07879 84 TSAVSGDEFQDFYLVMPYMQT-DLQKIM----GHPLSEDKVQYLVYQMLCGLKYIHSA-GIIHRDLKPGNLAVNEDCELK 157 (342)
T ss_pred cccccCCCCceEEEEeccccc-CHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCCCEE
Confidence 6543 46999999964 787765 23589999999999999999999998 999999999999999999999
Q ss_pred eeccCCccccCCC-CcccCCCCCCCcccccC-CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccc---------
Q 011519 197 LSCFGLMKNSRDG-RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI--------- 265 (484)
Q Consensus 197 l~DfG~a~~~~~~-~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~--------- 265 (484)
|+|||+++..... ....++..|+|||.+.+ ..++.++|||||||++|||++|+.||.............
T Consensus 158 L~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 237 (342)
T cd07879 158 ILDFGLARHADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPE 237 (342)
T ss_pred EeeCCCCcCCCCCCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHH
Confidence 9999998765433 33466888999999876 458899999999999999999999886532111000000
Q ss_pred ----------cccc---cccccCCC---ChHHHHHHHHHHHHHhccCCCCCCChHHHHHH--HHhhh
Q 011519 266 ----------QTLT---DSCLEGQF---SSDEGTELVRLASRCLQYEPRERPNPRSLVTA--LVTLQ 314 (484)
Q Consensus 266 ----------~~~~---~~~~~~~~---~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~--l~~~~ 314 (484)
.... .......+ .+..+..+.+|+.+||+.||.+||++.+++.| ++...
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~ 304 (342)
T cd07879 238 FVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFR 304 (342)
T ss_pred HHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcc
Confidence 0000 00000000 11245678999999999999999999999987 55543
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-38 Score=300.62 Aligned_cols=248 Identities=18% Similarity=0.218 Sum_probs=196.5
Q ss_pred ccccccCCCCCCceEEEEEe----CCCcEEEEEEecCCCC----ccHHHHHHHHHHHhcC-CCCceeeeeeeeeeCCceE
Q 011519 59 ENIVSEHGEKAPNVVYKGKL----ENQFRIAVKRFNRSAW----PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL 129 (484)
Q Consensus 59 ~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~ 129 (484)
|.+++.||.|+||.||+++. .+++.||||.++.... ...+.+.+|+.++.++ +||||+++++.+..+...+
T Consensus 2 ~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~ 81 (288)
T cd05583 2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLH 81 (288)
T ss_pred ceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEE
Confidence 56778889999999999983 3578899999875321 1245688999999999 5999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC
Q 011519 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 209 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 209 (484)
+||||+++|+|.+++. ....+++..+..++.|++.||.|||+. +++|+||||+||+++.++.++|+|||++......
T Consensus 82 lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~ql~~~l~~lH~~-~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 158 (288)
T cd05583 82 LILDYVNGGELFTHLY--QREHFTESEVRVYIAEIVLALDHLHQL-GIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAE 158 (288)
T ss_pred EEEecCCCCcHHHHHh--hcCCcCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHeEECCCCCEEEEECccccccccc
Confidence 9999999999999986 345689999999999999999999998 9999999999999999999999999998764432
Q ss_pred C-----cccCCCCCCCcccccCCC--CCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHH
Q 011519 210 R-----SYSTNLAFTPPEYLRTGR--VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG 282 (484)
Q Consensus 210 ~-----~~~~t~~y~aPE~~~~~~--~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (484)
. ...++..|++||.+.+.. .+.++||||||+++|+|++|..|+................... ....+...+
T Consensus 159 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 236 (288)
T cd05583 159 EEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKS--KPPFPKTMS 236 (288)
T ss_pred cccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHcc--CCCCCcccC
Confidence 1 245788999999987655 7889999999999999999998874321100000000001110 112344456
Q ss_pred HHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 283 TELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 283 ~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
..+.+++.+||+.||++|||+.++...|.
T Consensus 237 ~~l~~li~~~l~~~p~~R~t~~~~~~~l~ 265 (288)
T cd05583 237 AEARDFIQKLLEKDPKKRLGANGADEIKN 265 (288)
T ss_pred HHHHHHHHHHhcCCHhhccCcchHHHHhc
Confidence 78999999999999999999877766544
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-38 Score=308.54 Aligned_cols=248 Identities=16% Similarity=0.218 Sum_probs=193.0
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeC----------
Q 011519 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEG---------- 125 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~---------- 125 (484)
.+|.+++.||.|+||.||+|. ..++..||+|++........+.+.+|+++++.++||||+++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS 84 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence 467788889999999999999 467899999999766555567789999999999999999999876543
Q ss_pred ----CceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeec-CCCCceeecc
Q 011519 126 ----DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD-DDVNPRLSCF 200 (484)
Q Consensus 126 ----~~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~-~~~~~kl~Df 200 (484)
...++||||++ ++|.+++. ...+++..+..++.||+.||.|||+. |++||||||+||+++ .++.++|+||
T Consensus 85 ~~~~~~~~lv~e~~~-~~L~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~-givH~dikp~Nili~~~~~~~kl~df 159 (342)
T cd07854 85 LTELNSVYIVQEYME-TDLANVLE---QGPLSEEHARLFMYQLLRGLKYIHSA-NVLHRDLKPANVFINTEDLVLKIGDF 159 (342)
T ss_pred ccccceEEEEeeccc-ccHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEEcCCCceEEECCc
Confidence 35789999997 58998884 34689999999999999999999998 999999999999998 4567899999
Q ss_pred CCccccCCC-------CcccCCCCCCCcccccC-CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccc-------
Q 011519 201 GLMKNSRDG-------RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI------- 265 (484)
Q Consensus 201 G~a~~~~~~-------~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~------- 265 (484)
|++...... ....++..|+|||.+.+ ..++.++|||||||++|+|++|+.||.............
T Consensus 160 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 239 (342)
T cd07854 160 GLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVR 239 (342)
T ss_pred ccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence 998764322 12346788999998754 457889999999999999999999885431100000000
Q ss_pred --------ccccc----ccccC-----CCChHHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 266 --------QTLTD----SCLEG-----QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 266 --------~~~~~----~~~~~-----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
..... ..... ......+.++.+|+.+||..||.+|||+.+++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 300 (342)
T cd07854 240 EEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH 300 (342)
T ss_pred hHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence 00000 00000 0112345789999999999999999999999987
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-37 Score=300.19 Aligned_cols=250 Identities=21% Similarity=0.225 Sum_probs=193.1
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCC--ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCC-------
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGD------- 126 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~------- 126 (484)
..|.+.+.||.|+||.||+|.. .+++.||||.++.... .....+.+|+.+++.++||||+++++++.+..
T Consensus 7 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~ 86 (302)
T cd07864 7 DKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKK 86 (302)
T ss_pred hhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhccc
Confidence 3566778889999999999995 5688999999975432 22356788999999999999999999987654
Q ss_pred ---ceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCc
Q 011519 127 ---ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLM 203 (484)
Q Consensus 127 ---~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a 203 (484)
..++|+||+++ +|.+++... ...+++..+..++.||+.||.|||+. |++|+||||+||++++++.+||+|||++
T Consensus 87 ~~~~~~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~-~i~H~dl~p~nili~~~~~~kl~dfg~~ 163 (302)
T cd07864 87 DKGAFYLVFEYMDH-DLMGLLESG-LVHFSEDHIKSFMKQLLEGLNYCHKK-NFLHRDIKCSNILLNNKGQIKLADFGLA 163 (302)
T ss_pred cCCcEEEEEcccCc-cHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEECCCCcEEeCccccc
Confidence 78999999976 787777542 44689999999999999999999999 9999999999999999999999999998
Q ss_pred cccCCCC-----cccCCCCCCCcccccCC-CCCCCCceeehHHHHHHHhhCCCCCCchhhHHh----hh---cccc----
Q 011519 204 KNSRDGR-----SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLI----RD---RNIQ---- 266 (484)
Q Consensus 204 ~~~~~~~-----~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~----~~---~~~~---- 266 (484)
....... ...++..|+|||++.+. .++.++|||||||++++|++|+.||........ .. ....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (302)
T cd07864 164 RLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWP 243 (302)
T ss_pred ccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcc
Confidence 8654322 22346789999988654 478899999999999999999987753211100 00 0000
Q ss_pred cccccc----------cc---CCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 267 TLTDSC----------LE---GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 267 ~~~~~~----------~~---~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
.+.... .. .......+..+.+++..||..||.+|||+.+++.+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 299 (302)
T cd07864 244 DVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNS 299 (302)
T ss_pred cccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 000000 00 00112246789999999999999999999999876
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-37 Score=292.28 Aligned_cols=254 Identities=17% Similarity=0.266 Sum_probs=194.2
Q ss_pred cccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhc--CCCCceeeeeeeeeeCC----ceEEE
Q 011519 58 MENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQ--LRNRRLANLLGCCCEGD----ERLLV 131 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~hpniv~l~~~~~~~~----~~~lv 131 (484)
..++++.+|+|.||.||||.+.+ +.||||++... +...|..|-++... ++|+||++++++-.... .++||
T Consensus 211 pl~l~eli~~Grfg~V~KaqL~~-~~VAVKifp~~---~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLV 286 (534)
T KOG3653|consen 211 PLQLLELIGRGRFGCVWKAQLDN-RLVAVKIFPEQ---EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLV 286 (534)
T ss_pred chhhHHHhhcCccceeehhhccC-ceeEEEecCHH---HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEE
Confidence 34555667999999999999844 79999999743 35667777777665 58999999999876655 79999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcC--------CCcccccccccceeecCCCCceeeccCCc
Q 011519 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK--------ERALYHDLNAYRIVFDDDVNPRLSCFGLM 203 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~--------~~ivH~Dlkp~Nill~~~~~~kl~DfG~a 203 (484)
+||.+.|||.++|+ ...++|....+|+..+++||+|||+. .+|+|||||+.||||.+|++.-|+|||+|
T Consensus 287 t~fh~kGsL~dyL~---~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLA 363 (534)
T KOG3653|consen 287 TEFHPKGSLCDYLK---ANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLA 363 (534)
T ss_pred eeeccCCcHHHHHH---hccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeecccee
Confidence 99999999999995 45799999999999999999999983 56999999999999999999999999999
Q ss_pred cccCCC------CcccCCCCCCCcccccCCC-CC-----CCCceeehHHHHHHHhhCCCCC-------CchhhH-Hhhh-
Q 011519 204 KNSRDG------RSYSTNLAFTPPEYLRTGR-VT-----PESVMYSFGTLLLDLLSGKHIP-------PSHALD-LIRD- 262 (484)
Q Consensus 204 ~~~~~~------~~~~~t~~y~aPE~~~~~~-~~-----~~~Dv~slG~~l~el~tg~~p~-------~~~~~~-~~~~- 262 (484)
..+..+ ...+||..|||||++.+.- +. .+.||||+|.|||||++.-.-. +....+ .+..
T Consensus 364 l~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~h 443 (534)
T KOG3653|consen 364 LRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNH 443 (534)
T ss_pred EEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCC
Confidence 886543 2468999999999998642 22 3689999999999999865322 111000 0100
Q ss_pred ccccc----cccccccCCCCh-----HHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhcCCC
Q 011519 263 RNIQT----LTDSCLEGQFSS-----DEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 318 (484)
Q Consensus 263 ~~~~~----~~~~~~~~~~~~-----~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~ 318 (484)
..+.+ +.....++.++. .....+.+.+..||..||+.|.|+.-+.+.+..+.....
T Consensus 444 Pt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~ 508 (534)
T KOG3653|consen 444 PTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWE 508 (534)
T ss_pred CCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCC
Confidence 00000 111111222222 235678999999999999999999999998888766543
|
|
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-37 Score=304.56 Aligned_cols=252 Identities=18% Similarity=0.161 Sum_probs=195.3
Q ss_pred Cccccc-ccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCcc--------------HHHHHHHHHHHhcCCCCceeeeee
Q 011519 57 AMENIV-SEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD--------------ARQFLEEARAVGQLRNRRLANLLG 120 (484)
Q Consensus 57 ~~~~~~-~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--------------~~~~~~E~~~l~~l~hpniv~l~~ 120 (484)
.+|..+ +.||.|+||+||+|. ..+++.||||++....... ...+.+|+.+++.++||||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 355544 458999999999999 4578999999986543221 124789999999999999999999
Q ss_pred eeeeCCceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeecc
Q 011519 121 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCF 200 (484)
Q Consensus 121 ~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Df 200 (484)
++...+..++||||+. |+|.+++. ....+++.....++.|++.||.|||+. |++|+||||+||+++.++.++|+||
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~--~~~~~~~~~~~~~~~ql~~aL~~LH~~-~i~H~dl~~~nill~~~~~~kl~df 163 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVD--RKIRLTESQVKCILLQILNGLNVLHKW-YFMHRDLSPANIFINSKGICKIADF 163 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhC-CeecccccHHHeEECCCCCEEECCc
Confidence 9999999999999996 58999986 345689999999999999999999998 9999999999999999999999999
Q ss_pred CCccccCC------------------CCcccCCCCCCCcccccCCC-CCCCCceeehHHHHHHHhhCCCCCCchhhHHhh
Q 011519 201 GLMKNSRD------------------GRSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIR 261 (484)
Q Consensus 201 G~a~~~~~------------------~~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~ 261 (484)
|++..... .....+++.|+|||.+.+.. ++.++|||||||++|+|+||..|+.........
T Consensus 164 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~ 243 (335)
T PTZ00024 164 GLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQL 243 (335)
T ss_pred cceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 99876541 01223577899999987644 688999999999999999999887644221110
Q ss_pred hcc-------ccc-ccc-----------cccc---CCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHh
Q 011519 262 DRN-------IQT-LTD-----------SCLE---GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVT 312 (484)
Q Consensus 262 ~~~-------~~~-~~~-----------~~~~---~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~ 312 (484)
... ... ... .... .......+..+.+++..||+.+|++|||+.+++.+.+-
T Consensus 244 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~ 316 (335)
T PTZ00024 244 GRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYF 316 (335)
T ss_pred HHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCccc
Confidence 000 000 000 0000 00112335778999999999999999999999987543
|
|
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-38 Score=260.20 Aligned_cols=249 Identities=18% Similarity=0.248 Sum_probs=199.9
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCcc--HHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEec
Q 011519 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey 134 (484)
.|+..++||+|.||+||+|+ +++++.||+|.++.....+ ....++|+-+|+.++|.|||+++++...+..+-+|+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 45566788999999999999 6789999999987654322 45688999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----C
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----R 210 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~----~ 210 (484)
|.. +|..+... -++.++...+..++.|+++||.|+|+. +++|||+||.|.||+.+|++||+|||+++.++-. +
T Consensus 83 cdq-dlkkyfds-lng~~d~~~~rsfmlqllrgl~fchsh-nvlhrdlkpqnllin~ngelkladfglarafgipvrcys 159 (292)
T KOG0662|consen 83 CDQ-DLKKYFDS-LNGDLDPEIVRSFMLQLLRGLGFCHSH-NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYS 159 (292)
T ss_pred hhH-HHHHHHHh-cCCcCCHHHHHHHHHHHHhhhhhhhhh-hhhhccCCcceEEeccCCcEEecccchhhhcCCceEeee
Confidence 966 89998864 456799999999999999999999998 9999999999999999999999999999986653 3
Q ss_pred cccCCCCCCCcccccCCC-CCCCCceeehHHHHHHHhhC-CCCCCchhhHHhhhcc--------------cccccccccc
Q 011519 211 SYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSG-KHIPPSHALDLIRDRN--------------IQTLTDSCLE 274 (484)
Q Consensus 211 ~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~tg-~~p~~~~~~~~~~~~~--------------~~~~~~~~~~ 274 (484)
....|..|.+|.++.+.. |+...|+||-||++.|+... ++.|++...+....+. +..+.+-...
T Consensus 160 aevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~y 239 (292)
T KOG0662|consen 160 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPY 239 (292)
T ss_pred ceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCccc
Confidence 345689999999999865 89999999999999999874 4456665433222111 1111111111
Q ss_pred CCCC---------hHHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 275 GQFS---------SDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 275 ~~~~---------~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
+.++ +.....-++++...|.-+|.+|.+++..+++
T Consensus 240 p~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqh 283 (292)
T KOG0662|consen 240 PIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH 283 (292)
T ss_pred CCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcC
Confidence 1121 2233456789999999999999999998876
|
|
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-37 Score=304.69 Aligned_cols=248 Identities=15% Similarity=0.204 Sum_probs=195.5
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCc--cHHHHHHHHHHHhcCCCCceeeeeeeeeeCC------c
Q 011519 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGD------E 127 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~------~ 127 (484)
..|.+++.||.|+||.||++. ..++..||||++...... ....+.+|+.+++.++||||+++++++.... .
T Consensus 15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 94 (343)
T cd07880 15 DRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHD 94 (343)
T ss_pred cceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccce
Confidence 457788999999999999998 567899999998653222 2456889999999999999999999987553 3
Q ss_pred eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccC
Q 011519 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 207 (484)
Q Consensus 128 ~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~ 207 (484)
.++||||+ +++|.+++. ...+++..+..++.||+.||.|||+. |++||||||+||+++.++.++|+|||++....
T Consensus 95 ~~lv~e~~-~~~l~~~~~---~~~l~~~~~~~i~~qi~~al~~LH~~-gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~ 169 (343)
T cd07880 95 FYLVMPFM-GTDLGKLMK---HEKLSEDRIQFLVYQMLKGLKYIHAA-GIIHRDLKPGNLAVNEDCELKILDFGLARQTD 169 (343)
T ss_pred EEEEEecC-CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCCCEEEeecccccccc
Confidence 58999999 779998884 35689999999999999999999998 99999999999999999999999999988755
Q ss_pred CC-CcccCCCCCCCcccccC-CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcc-------------------cc
Q 011519 208 DG-RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN-------------------IQ 266 (484)
Q Consensus 208 ~~-~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~-------------------~~ 266 (484)
.. ....+++.|+|||.+.+ ..++.++|+||||+++|+|++|..||............ ..
T Consensus 170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (343)
T cd07880 170 SEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAK 249 (343)
T ss_pred cCccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHH
Confidence 43 33467889999999876 35788999999999999999999887643211000000 00
Q ss_pred ccccc---ccc---CCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 267 TLTDS---CLE---GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 267 ~~~~~---~~~---~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
..... ... .......+..+.+++.+||..||++|||+.+++.+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~ 298 (343)
T cd07880 250 NYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAH 298 (343)
T ss_pred HHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000 000 01112346679999999999999999999999977
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-37 Score=292.33 Aligned_cols=245 Identities=16% Similarity=0.191 Sum_probs=196.5
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCC-----CccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEE
Q 011519 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA-----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 131 (484)
+|.+.+.||+|+||+||++.. ..+..+++|.++... .....++..|+.+++.++||||+++++++.+....++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 366778899999999999984 344556666665322 12234577899999999999999999999999999999
Q ss_pred EecCCCCCHHhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC
Q 011519 132 AEYMPNDTLAKHLFH--WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 209 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 209 (484)
|||+++++|.+++.. ..+..+++..++.++.|++.||.|||+. |++|+||||+||++++ +.++|+|||++......
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~-~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~ 158 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR-RILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGS 158 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc-CccccCCChhheEeec-CCEeecccCceeecCCC
Confidence 999999999998853 2345789999999999999999999998 9999999999999975 57999999998765432
Q ss_pred ----CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHH
Q 011519 210 ----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 285 (484)
Q Consensus 210 ----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 285 (484)
....+++.|+|||.+.+..++.++|+||||+++|+|++|..|+.............. ......+...+.++
T Consensus 159 ~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 233 (260)
T cd08222 159 CDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVE-----GPTPSLPETYSRQL 233 (260)
T ss_pred cccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHc-----CCCCCCcchhcHHH
Confidence 234578899999999888889999999999999999999988764322221111111 11112345667899
Q ss_pred HHHHHHHhccCCCCCCChHHHHHH
Q 011519 286 VRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 286 ~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
.+++.+||..+|++||++.+++++
T Consensus 234 ~~li~~~l~~~p~~Rp~~~~il~~ 257 (260)
T cd08222 234 NSIMQSMLNKDPSLRPSAAEILRN 257 (260)
T ss_pred HHHHHHHhcCChhhCcCHHHHhhC
Confidence 999999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-37 Score=294.79 Aligned_cols=248 Identities=21% Similarity=0.256 Sum_probs=196.8
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCC--CccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecC
Q 011519 59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 59 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~ 135 (484)
|.+++.||+|+||.||+|+. .+++.||+|++.... ....+.+..|+.+++.++||||+++++++...+..++||||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 34567789999999999994 568999999997653 223467889999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCC----c
Q 011519 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----S 211 (484)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~----~ 211 (484)
+ ++|.+++.... ..+++..+..++.|++.||.|||+. |++|+||+|+||++++++.++|+|||++....... .
T Consensus 81 ~-~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~-~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~ 157 (282)
T cd07829 81 D-MDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCHSH-RILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTH 157 (282)
T ss_pred C-cCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCChheEEEcCCCCEEEecCCcccccCCCccccCc
Confidence 7 59999997422 4699999999999999999999998 99999999999999999999999999987654332 2
Q ss_pred ccCCCCCCCcccccCC-CCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcc-----------------c---ccccc
Q 011519 212 YSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN-----------------I---QTLTD 270 (484)
Q Consensus 212 ~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~-----------------~---~~~~~ 270 (484)
..++..|+|||.+.+. .++.++||||||++++||++|..||............ . .....
T Consensus 158 ~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (282)
T cd07829 158 EVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFP 237 (282)
T ss_pred cccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhccccccccccc
Confidence 3456789999998776 7899999999999999999998877654221110000 0 00000
Q ss_pred ccccC---CCChHHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 271 SCLEG---QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 271 ~~~~~---~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
..... ...+..+..+.+++.+||..||++||++.+++.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 279 (282)
T cd07829 238 KFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKH 279 (282)
T ss_pred ccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence 00000 0111236789999999999999999999999876
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-38 Score=300.70 Aligned_cols=241 Identities=20% Similarity=0.227 Sum_probs=202.6
Q ss_pred ccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCcc--HHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCCCCC
Q 011519 63 SEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT 139 (484)
Q Consensus 63 ~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~~gs 139 (484)
+.||.|-||+||-|+ .++|+.||||+|.+..+.. ..++.+|+.+|++++||.||.+...|.+.+.+|+|||-+.| +
T Consensus 570 evLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~G-D 648 (888)
T KOG4236|consen 570 EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHG-D 648 (888)
T ss_pred hhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcc-h
Confidence 457999999999999 5689999999998765443 45788999999999999999999999999999999999955 6
Q ss_pred HHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCC---CCceeeccCCccccCCC---Cccc
Q 011519 140 LAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD---VNPRLSCFGLMKNSRDG---RSYS 213 (484)
Q Consensus 140 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~---~~~kl~DfG~a~~~~~~---~~~~ 213 (484)
+.+.|.....+.+++.....++.||+.||.|||-+ +|||+||||+|||+.+. -.+||||||+|+..... .+..
T Consensus 649 MLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~k-nIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRrsVV 727 (888)
T KOG4236|consen 649 MLEMILSSEKGRLPERITKFLVTQILVALRYLHFK-NIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRRSVV 727 (888)
T ss_pred HHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhc-ceeeccCCchheeeccCCCCCceeeccccceeecchhhhhhhhc
Confidence 66666555778899999999999999999999999 99999999999999744 46999999999998764 5789
Q ss_pred CCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchh--hHHhhhccccccccccccCCCChHHHHHHHHHHHH
Q 011519 214 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHA--LDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291 (484)
Q Consensus 214 ~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 291 (484)
|||.|.|||+++.+.|+..-|+||.||++|--++|..||..+. .+-+++..+ +.++ ....+.++...+||..
T Consensus 728 GTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAaF--MyPp----~PW~eis~~AidlIn~ 801 (888)
T KOG4236|consen 728 GTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAF--MYPP----NPWSEISPEAIDLINN 801 (888)
T ss_pred CCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhcccc--ccCC----CchhhcCHHHHHHHHH
Confidence 9999999999999999999999999999999999998875431 111211111 1111 2235667889999999
Q ss_pred HhccCCCCCCChHHHHHHHH
Q 011519 292 CLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 292 cl~~dp~~Rps~~~il~~l~ 311 (484)
+|+..-.+|-|....+.|.|
T Consensus 802 LLqVkm~kRysvdk~lsh~W 821 (888)
T KOG4236|consen 802 LLQVKMRKRYSVDKSLSHPW 821 (888)
T ss_pred HHHHHHHHhcchHhhccchh
Confidence 99999999999998887754
|
|
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-37 Score=289.51 Aligned_cols=236 Identities=22% Similarity=0.244 Sum_probs=196.6
Q ss_pred CCCCCCceEEEEEe-CCCcEEEEEEecCCCCc---cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCCCCCH
Q 011519 65 HGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTL 140 (484)
Q Consensus 65 lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~~gsL 140 (484)
||.|+||.||++.. .+++.||+|.+...... ....+..|+.+++.++||||+++++.+..++..++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 59999999999995 46889999998765432 345788999999999999999999999999999999999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----CcccCCC
Q 011519 141 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSYSTNL 216 (484)
Q Consensus 141 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~----~~~~~t~ 216 (484)
.+++.. ...+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++|+|||++...... ....++.
T Consensus 81 ~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lh~~-~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~ 157 (250)
T cd05123 81 FSHLSK--EGRFSEERARFYAAEIVLALEYLHSL-GIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTP 157 (250)
T ss_pred HHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcCCc
Confidence 999963 34689999999999999999999998 9999999999999999999999999998775442 3456788
Q ss_pred CCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHHhccC
Q 011519 217 AFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYE 296 (484)
Q Consensus 217 ~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 296 (484)
.|++||.+.+...+.++|+||||+++|+|++|..|+.............. ....++...+..+.+++.+||..|
T Consensus 158 ~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~~i~~~l~~~ 231 (250)
T cd05123 158 EYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILK------DPLRFPEFLSPEARDLISGLLQKD 231 (250)
T ss_pred cccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhc------CCCCCCCCCCHHHHHHHHHHhcCC
Confidence 99999999888889999999999999999999988764432111111111 111244445788999999999999
Q ss_pred CCCCCCh---HHHHHH
Q 011519 297 PRERPNP---RSLVTA 309 (484)
Q Consensus 297 p~~Rps~---~~il~~ 309 (484)
|++||++ .+++++
T Consensus 232 p~~R~~~~~~~~l~~~ 247 (250)
T cd05123 232 PTKRLGSGGAEEIKAH 247 (250)
T ss_pred HhhCCCcccHHHHHhC
Confidence 9999999 666554
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-37 Score=303.52 Aligned_cols=257 Identities=18% Similarity=0.221 Sum_probs=197.7
Q ss_pred HHHHHHhcCCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCC--ccHHHHHHHHHHHhcCCCCceeeeeeeee
Q 011519 47 ETLRTATSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCC 123 (484)
Q Consensus 47 ~~~~~~~~~f~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~ 123 (484)
.++...++ .|.+++.||+|+||.||+|. ..++..||||++..... ...+.+.+|+.++.+++||||+++++++.
T Consensus 10 ~~~~~~~~---~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~ 86 (345)
T cd07877 10 KTIWEVPE---RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT 86 (345)
T ss_pred HHHhhccC---ceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeee
Confidence 44444554 45677888999999999998 56789999999975422 22456889999999999999999999885
Q ss_pred eC------CceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCcee
Q 011519 124 EG------DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRL 197 (484)
Q Consensus 124 ~~------~~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl 197 (484)
.. ...+++++++ +++|.+++. ...+++..+..++.||+.||.|||+. |++||||||+||++++++.+||
T Consensus 87 ~~~~~~~~~~~~lv~~~~-~~~L~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~dlkp~NIll~~~~~~kl 161 (345)
T cd07877 87 PARSLEEFNDVYLVTHLM-GADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKI 161 (345)
T ss_pred ecccccccccEEEEehhc-ccCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCChHHEEEcCCCCEEE
Confidence 43 3468888887 779998884 34689999999999999999999998 9999999999999999999999
Q ss_pred eccCCccccCCC-CcccCCCCCCCcccccC-CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhc-------ccccc
Q 011519 198 SCFGLMKNSRDG-RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR-------NIQTL 268 (484)
Q Consensus 198 ~DfG~a~~~~~~-~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~-------~~~~~ 268 (484)
+|||++...... ....++..|+|||.+.+ ..++.++|||||||++|+|++|+.||+.......... ....+
T Consensus 162 ~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 241 (345)
T cd07877 162 LDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 241 (345)
T ss_pred ecccccccccccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 999998875443 33567889999999876 4588899999999999999999988764321110000 00000
Q ss_pred c---------------cccccC---CCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 269 T---------------DSCLEG---QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 269 ~---------------~~~~~~---~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
. ...... ......++.+.+|+.+||+.||.+|||+.+++.+-+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~ 302 (345)
T cd07877 242 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 302 (345)
T ss_pred HhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChh
Confidence 0 000000 001124677899999999999999999999998843
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-37 Score=301.03 Aligned_cols=248 Identities=17% Similarity=0.255 Sum_probs=194.4
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCC--ccHHHHHHHHHHHhcCCCCceeeeeeeeee-CCceEEEEe
Q 011519 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCE-GDERLLVAE 133 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~~~~~lv~E 133 (484)
.|.+++.||.|+||.||++. ..++..||||++..... ...+.+.+|+.+++.++||||+++.+++.. ....++|+|
T Consensus 11 ~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~lv~e 90 (328)
T cd07856 11 RYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYFVTE 90 (328)
T ss_pred ceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEEEee
Confidence 45677888999999999999 55789999998864322 234678899999999999999999999865 567899999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-Ccc
Q 011519 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-RSY 212 (484)
Q Consensus 134 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~-~~~ 212 (484)
|+ +++|.+++. ..++++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||++...... ...
T Consensus 91 ~~-~~~L~~~~~---~~~~~~~~~~~~~~ql~~aL~~LH~~-~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~ 165 (328)
T cd07856 91 LL-GTDLHRLLT---SRPLEKQFIQYFLYQILRGLKYVHSA-GVVHRDLKPSNILINENCDLKICDFGLARIQDPQMTGY 165 (328)
T ss_pred hh-ccCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEeECCCCCEEeCccccccccCCCcCCC
Confidence 99 568998884 34688899999999999999999999 9999999999999999999999999998765433 344
Q ss_pred cCCCCCCCcccccC-CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHh----h-----------h----cccccccccc
Q 011519 213 STNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLI----R-----------D----RNIQTLTDSC 272 (484)
Q Consensus 213 ~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~----~-----------~----~~~~~~~~~~ 272 (484)
.++..|+|||.+.+ ..++.++||||||+++|+|+||+.||+....... . . ..........
T Consensus 166 ~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (328)
T cd07856 166 VSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSL 245 (328)
T ss_pred cccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhc
Confidence 56788999999866 4689999999999999999999988764321000 0 0 0000000000
Q ss_pred -ccCCC-----ChHHHHHHHHHHHHHhccCCCCCCChHHHHHHH
Q 011519 273 -LEGQF-----SSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 273 -~~~~~-----~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 310 (484)
..... ....+..+.++|.+||+.+|++|||+.+++.+-
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~ 289 (328)
T cd07856 246 PKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHP 289 (328)
T ss_pred cccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCC
Confidence 00011 123457899999999999999999999998873
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=322.09 Aligned_cols=246 Identities=19% Similarity=0.221 Sum_probs=187.4
Q ss_pred CCcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCC-CccHHHHHHHHHHHhcCCCCceeeeeeeeeeC--------
Q 011519 56 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEG-------- 125 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-------- 125 (484)
+.+++.+..||+||||.||+++ .-||+.||||+|.... ........+|+.+|++|+|||||+++..|.+.
T Consensus 478 ~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~e 557 (1351)
T KOG1035|consen 478 LNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLE 557 (1351)
T ss_pred hhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccccc
Confidence 3445666677999999999999 5689999999997664 22355788999999999999999987543100
Q ss_pred --------------------------------------------------------------------------------
Q 011519 126 -------------------------------------------------------------------------------- 125 (484)
Q Consensus 126 -------------------------------------------------------------------------------- 125 (484)
T Consensus 558 i~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e 637 (1351)
T KOG1035|consen 558 IVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSE 637 (1351)
T ss_pred ccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccC
Confidence
Q ss_pred -------------------------------CceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcC
Q 011519 126 -------------------------------DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK 174 (484)
Q Consensus 126 -------------------------------~~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~ 174 (484)
..+||-||||+.-+|.+++.++.... .....|+++++|+.||.|+|+.
T Consensus 638 ~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~-~~d~~wrLFreIlEGLaYIH~~ 716 (1351)
T KOG1035|consen 638 GSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS-QRDEAWRLFREILEGLAYIHDQ 716 (1351)
T ss_pred CccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch-hhHHHHHHHHHHHHHHHHHHhC
Confidence 01489999999977777775322111 4678899999999999999999
Q ss_pred CCcccccccccceeecCCCCceeeccCCccccC----------------------CCCcccCCCCCCCcccccCCC---C
Q 011519 175 ERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR----------------------DGRSYSTNLAFTPPEYLRTGR---V 229 (484)
Q Consensus 175 ~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~----------------------~~~~~~~t~~y~aPE~~~~~~---~ 229 (484)
|+|||||||.||++++++.|||+|||++.... ..+...||--|+|||++.+.. |
T Consensus 717 -giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Y 795 (1351)
T KOG1035|consen 717 -GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKY 795 (1351)
T ss_pred -ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccc
Confidence 99999999999999999999999999987611 123467889999999998754 9
Q ss_pred CCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcccccccccccc--CCCChHHHHHHHHHHHHHhccCCCCCCChHHHH
Q 011519 230 TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLE--GQFSSDEGTELVRLASRCLQYEPRERPNPRSLV 307 (484)
Q Consensus 230 ~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il 307 (484)
+.|+|+||||||++||+.- |...... -..+..+.+..++ ..+.....+.-..+|.++++.||.+|||+.++|
T Consensus 796 n~KiDmYSLGIVlFEM~yP---F~TsMER---a~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL 869 (1351)
T KOG1035|consen 796 NSKIDMYSLGIVLFEMLYP---FGTSMER---ASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATELL 869 (1351)
T ss_pred cchhhhHHHHHHHHHHhcc---CCchHHH---HHHHHhcccCCCCCCcccccccchHHHHHHHHHhcCCCccCCCHHHHh
Confidence 9999999999999999963 4322211 1112222222211 123344456678899999999999999999998
Q ss_pred HH
Q 011519 308 TA 309 (484)
Q Consensus 308 ~~ 309 (484)
+.
T Consensus 870 ~s 871 (1351)
T KOG1035|consen 870 NS 871 (1351)
T ss_pred hc
Confidence 75
|
|
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-37 Score=300.61 Aligned_cols=247 Identities=18% Similarity=0.245 Sum_probs=190.6
Q ss_pred ccccccCCCCCCceEEEEEe-CC--CcEEEEEEecCCCCc--cHHHHHHHHHHHhcC-CCCceeeeeeeeeeC----Cce
Q 011519 59 ENIVSEHGEKAPNVVYKGKL-EN--QFRIAVKRFNRSAWP--DARQFLEEARAVGQL-RNRRLANLLGCCCEG----DER 128 (484)
Q Consensus 59 ~~~~~~lG~G~~g~Vy~~~~-~~--~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~----~~~ 128 (484)
|++.+.||+|+||.||+++. .+ +..||||++...... ..+.+.+|+.+++++ .||||+++++.+... ...
T Consensus 2 y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 81 (332)
T cd07857 2 YELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNEL 81 (332)
T ss_pred ceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcE
Confidence 56677889999999999994 34 788999998753222 245788999999999 599999999875432 457
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC
Q 011519 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 208 (484)
Q Consensus 129 ~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~ 208 (484)
++++||+. ++|.+++. ....+++..+..++.||+.||.|||+. |++||||||+||+++.++.+||+|||++.....
T Consensus 82 ~~~~e~~~-~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~-givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~ 157 (332)
T cd07857 82 YLYEELME-ADLHQIIR--SGQPLTDAHFQSFIYQILCGLKYIHSA-NVLHRDLKPGNLLVNADCELKICDFGLARGFSE 157 (332)
T ss_pred EEEEeccc-CCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHeEEcCCCCEEeCcCCCceeccc
Confidence 89999985 58999986 455799999999999999999999998 999999999999999999999999999876432
Q ss_pred C--------CcccCCCCCCCcccccC-CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhc----------------
Q 011519 209 G--------RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR---------------- 263 (484)
Q Consensus 209 ~--------~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~---------------- 263 (484)
. ....||+.|+|||++.+ ..++.++||||||+++|+|++|..||...........
T Consensus 158 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (332)
T cd07857 158 NPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRI 237 (332)
T ss_pred ccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhh
Confidence 1 23467889999998765 4589999999999999999999987754211100000
Q ss_pred ---c-------ccccccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHH
Q 011519 264 ---N-------IQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 264 ---~-------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 310 (484)
. ......... .......+..+.+|+.+||+.||.+|||+.+++.+-
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~ 293 (332)
T cd07857 238 GSPKAQNYIRSLPNIPKKPF-ESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHP 293 (332)
T ss_pred hhhhHHHHHHhccccCCcch-HhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcCh
Confidence 0 000000000 001122357899999999999999999999999873
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-38 Score=309.19 Aligned_cols=192 Identities=22% Similarity=0.274 Sum_probs=168.1
Q ss_pred ccCCCCCCceEEEEE-eCCCcEEEEEEecCCC-CccHHHHHHHHHHHhcCCCCceeeeeeeeeeC------CceEEEEec
Q 011519 63 SEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEG------DERLLVAEY 134 (484)
Q Consensus 63 ~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~------~~~~lv~Ey 134 (484)
+.||+|+||.||+|+ ..+|+.||||.++... ....+...+|+++|++++|||||+++++=.+. ....+||||
T Consensus 19 e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvmEy 98 (732)
T KOG4250|consen 19 ERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVMEY 98 (732)
T ss_pred hhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEEee
Confidence 456999999999999 7789999999998744 34577899999999999999999999986543 357899999
Q ss_pred CCCCCHHhhhccCC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeec--CCCC--ceeeccCCccccCCC
Q 011519 135 MPNDTLAKHLFHWE-TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD--DDVN--PRLSCFGLMKNSRDG 209 (484)
Q Consensus 135 ~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~--~~~~--~kl~DfG~a~~~~~~ 209 (484)
|.||||...|.+.. ...+++.+.+.++..+..||.|||+. |||||||||.||++- .+|+ -||+|||.|+...+.
T Consensus 99 C~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn-~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~ 177 (732)
T KOG4250|consen 99 CSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLREN-GIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDN 177 (732)
T ss_pred cCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHc-CceeccCCCCcEEEeecCCCceEEeeecccccccCCCC
Confidence 99999999997543 34699999999999999999999998 999999999999993 3344 699999999988776
Q ss_pred ---CcccCCCCCCCccccc-CCCCCCCCceeehHHHHHHHhhCCCCCCch
Q 011519 210 ---RSYSTNLAFTPPEYLR-TGRVTPESVMYSFGTLLLDLLSGKHIPPSH 255 (484)
Q Consensus 210 ---~~~~~t~~y~aPE~~~-~~~~~~~~Dv~slG~~l~el~tg~~p~~~~ 255 (484)
.+..||..|.+||+.. .+.|+...|.|||||++|+++||..||-..
T Consensus 178 s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~ 227 (732)
T KOG4250|consen 178 SLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPF 227 (732)
T ss_pred CeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcC
Confidence 4678999999999998 478999999999999999999999998543
|
|
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-37 Score=298.88 Aligned_cols=251 Identities=18% Similarity=0.230 Sum_probs=191.6
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCcc--HHHHHHHHHHHhcCCCCceeeeeeeeeeCC------
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLGCCCEGD------ 126 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~hpniv~l~~~~~~~~------ 126 (484)
..+|.+++.||.|+||.||+|.. .+++.||||++....... ...+.+|+++++.++||||+++++++....
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 45778889999999999999994 568899999986543222 345789999999999999999999875433
Q ss_pred --ceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCcc
Q 011519 127 --ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK 204 (484)
Q Consensus 127 --~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~ 204 (484)
.+++||||+.+ +|...+.. ....+++..+..++.||+.||.|||+. |++|+||||+||++++++.++|+|||++.
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~-~~~~~~~~~~~~i~~~l~~al~~lH~~-~i~H~dl~p~nil~~~~~~~~l~dfg~~~ 163 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLEN-PSVKLTESQIKCYMLQLLEGINYLHEN-HILHRDIKAANILIDNQGILKIADFGLAR 163 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEECCCCCEEECcCccch
Confidence 46999999965 78777753 345699999999999999999999999 99999999999999999999999999987
Q ss_pred ccCCCC---------------cccCCCCCCCcccccCC-CCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcc----
Q 011519 205 NSRDGR---------------SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN---- 264 (484)
Q Consensus 205 ~~~~~~---------------~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~---- 264 (484)
...... ...+++.|+|||.+.+. .++.++|||||||++|+|++|+.||............
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~ 243 (311)
T cd07866 164 PYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLC 243 (311)
T ss_pred hccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence 543221 12456789999988654 4789999999999999999999877543211100000
Q ss_pred -------------ccccccccccCCCC-------hHHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 265 -------------IQTLTDSCLEGQFS-------SDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 265 -------------~~~~~~~~~~~~~~-------~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
.............+ ....+.+.+++.+||..||.+|||+.+++.+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~ 308 (311)
T cd07866 244 GTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEH 308 (311)
T ss_pred CCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcC
Confidence 00000000000001 1233678999999999999999999999876
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-37 Score=286.25 Aligned_cols=224 Identities=19% Similarity=0.207 Sum_probs=181.4
Q ss_pred CCCceEEEEE-eCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCCCCCHHhhhcc
Q 011519 68 KAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFH 146 (484)
Q Consensus 68 G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~~gsL~~~l~~ 146 (484)
|.||.||++. ..+++.||+|.+.... .+.+|...+....||||+++++++.+.+..++||||++||+|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 7899999999 5678999999997543 233455555566799999999999999999999999999999999863
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-CcccCCCCCCCccccc
Q 011519 147 WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-RSYSTNLAFTPPEYLR 225 (484)
Q Consensus 147 ~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~-~~~~~t~~y~aPE~~~ 225 (484)
...+++..+..++.|++.||.|||+. |++||||||+||+++.++.++|+|||.+...... ....++..|+|||.+.
T Consensus 79 --~~~l~~~~~~~~~~ql~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~y~aPE~~~ 155 (237)
T cd05576 79 --FLNIPEECVKRWAAEMVVALDALHRE-GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENMYCAPEVGG 155 (237)
T ss_pred --hcCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHEEEcCCCCEEEecccchhccccccccCCcCccccCCcccC
Confidence 34689999999999999999999998 9999999999999999999999999987655432 2344567899999998
Q ss_pred CCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHHhccCCCCCCCh--
Q 011519 226 TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNP-- 303 (484)
Q Consensus 226 ~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~-- 303 (484)
+..++.++||||+|+++|+|++|..|+....... . .......+...++.+.+++.+||+.||++||++
T Consensus 156 ~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~------~----~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~ 225 (237)
T cd05576 156 ISEETEACDWWSLGAILFELLTGKTLVECHPSGI------N----THTTLNIPEWVSEEARSLLQQLLQFNPTERLGAGV 225 (237)
T ss_pred CCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc------c----cccccCCcccCCHHHHHHHHHHccCCHHHhcCCCc
Confidence 8889999999999999999999997653221110 0 000112344566889999999999999999996
Q ss_pred ---HHHHHH
Q 011519 304 ---RSLVTA 309 (484)
Q Consensus 304 ---~~il~~ 309 (484)
+++++|
T Consensus 226 ~~~~~~~~h 234 (237)
T cd05576 226 AGVEDIKSH 234 (237)
T ss_pred cchHHHHcC
Confidence 555543
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-37 Score=305.18 Aligned_cols=249 Identities=18% Similarity=0.231 Sum_probs=196.7
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCC--CccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCc-----
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDE----- 127 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~----- 127 (484)
..+|.+++.||.|+||.||+|.. .++..||||++.... ....+.+.+|+.+++.++||||+++++++...+.
T Consensus 14 ~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 93 (343)
T cd07851 14 PDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQ 93 (343)
T ss_pred cCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccc
Confidence 34678888999999999999995 568899999986532 2234567889999999999999999998866554
Q ss_pred -eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCcccc
Q 011519 128 -RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 206 (484)
Q Consensus 128 -~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~ 206 (484)
.++|+||+ +++|.+++. ...+++..+..++.|++.||.|||+. |++|+||||+||++++++.++|+|||++...
T Consensus 94 ~~~lv~e~~-~~~L~~~~~---~~~l~~~~~~~~~~ql~~aL~~LH~~-gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~ 168 (343)
T cd07851 94 DVYLVTHLM-GADLNNIVK---CQKLSDDHIQFLVYQILRGLKYIHSA-GIIHRDLKPSNIAVNEDCELKILDFGLARHT 168 (343)
T ss_pred cEEEEEecC-CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEECCCCCEEEccccccccc
Confidence 89999999 669999985 35699999999999999999999998 9999999999999999999999999998875
Q ss_pred CCC-CcccCCCCCCCcccccCC-CCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccc-------c---------
Q 011519 207 RDG-RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQT-------L--------- 268 (484)
Q Consensus 207 ~~~-~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~-------~--------- 268 (484)
... ....++..|+|||.+.+. .++.++||||||+++|+|++|+.||............... +
T Consensus 169 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 248 (343)
T cd07851 169 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESA 248 (343)
T ss_pred cccccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhH
Confidence 443 345678899999998653 5788999999999999999999887643221110000000 0
Q ss_pred ---cc---ccccCC---CChHHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 269 ---TD---SCLEGQ---FSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 269 ---~~---~~~~~~---~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
.. ...... .....+..+.+++.+||..||++|||+.+|+.+
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h 298 (343)
T cd07851 249 RNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH 298 (343)
T ss_pred HHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence 00 000000 011236789999999999999999999999987
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-37 Score=323.69 Aligned_cols=146 Identities=21% Similarity=0.226 Sum_probs=131.1
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCcc---HHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEE
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPD---ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 131 (484)
+..|.+++.||.|+||+||+|.. .+++.||||+++...... ...+..|+.++..++||||+++++++...+..+||
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence 45778899999999999999995 478999999997543222 45788999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCcc
Q 011519 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK 204 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~ 204 (484)
|||+.|++|.+++. ..+.+++..++.|+.||+.||.|||+. +||||||||+|||++.++.+||+|||+++
T Consensus 83 mEy~~g~~L~~li~--~~~~l~~~~~~~i~~qil~aL~yLH~~-gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 83 MEYLIGGDVKSLLH--IYGYFDEEMAVKYISEVALALDYLHRH-GIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred EeCCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhC-CEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 99999999999996 345689999999999999999999998 99999999999999999999999999874
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-37 Score=284.83 Aligned_cols=251 Identities=16% Similarity=0.179 Sum_probs=201.0
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCC--CC----ceeeeeeeeeeCCceE
Q 011519 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR--NR----RLANLLGCCCEGDERL 129 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--hp----niv~l~~~~~~~~~~~ 129 (484)
.+|.+++.+|+|.||.|-.++ ...+..||||+++.-. .-.+..+-|+++|+++. -| -+|++.++|.-.++.+
T Consensus 89 ~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~-kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiC 167 (415)
T KOG0671|consen 89 NRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD-KYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHIC 167 (415)
T ss_pred cceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH-HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceE
Confidence 467888999999999999999 4568899999997532 22455778999999993 23 3889999999999999
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecC------------------
Q 011519 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD------------------ 191 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~------------------ 191 (484)
||+|.+ |-|+.++|..+.-.+++..++..++.|++.+++|||+. +++|.||||+|||+.+
T Consensus 168 ivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~-kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~ 245 (415)
T KOG0671|consen 168 IVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDL-KLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRP 245 (415)
T ss_pred EEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhc-ceeecCCChheEEEeccceEEEeccCCccceecc
Confidence 999999 77999999877778899999999999999999999999 9999999999999932
Q ss_pred --CCCceeeccCCccccCCC-CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchh-------hHHhh
Q 011519 192 --DVNPRLSCFGLMKNSRDG-RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHA-------LDLIR 261 (484)
Q Consensus 192 --~~~~kl~DfG~a~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~-------~~~~~ 261 (484)
+..|+|+|||.|...... ...+.|..|.|||++.+-.++..+||||+||||+||.||...|+... ++.+.
T Consensus 246 ~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIl 325 (415)
T KOG0671|consen 246 LKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERIL 325 (415)
T ss_pred CCCcceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhh
Confidence 235899999999887654 45677999999999999999999999999999999999998776532 11111
Q ss_pred hccccccccc-----------------------------ccc----CCCChHHHHHHHHHHHHHhccCCCCCCChHHHHH
Q 011519 262 DRNIQTLTDS-----------------------------CLE----GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVT 308 (484)
Q Consensus 262 ~~~~~~~~~~-----------------------------~~~----~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~ 308 (484)
+.....++.. +.. ..........|.+|+..||..||.+|+|+.|++.
T Consensus 326 Gp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~ 405 (415)
T KOG0671|consen 326 GPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALS 405 (415)
T ss_pred CCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhc
Confidence 1110000000 000 0112335677999999999999999999999998
Q ss_pred HH
Q 011519 309 AL 310 (484)
Q Consensus 309 ~l 310 (484)
|-
T Consensus 406 Hp 407 (415)
T KOG0671|consen 406 HP 407 (415)
T ss_pred CH
Confidence 83
|
|
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-37 Score=286.74 Aligned_cols=247 Identities=21% Similarity=0.279 Sum_probs=197.5
Q ss_pred ccccccCCCCCCceEEEEE-eCCCcEEEEEEecCC-CCcc------HHHHHHHHHHHhcCCCCceeeeeeeeee-CCceE
Q 011519 59 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRS-AWPD------ARQFLEEARAVGQLRNRRLANLLGCCCE-GDERL 129 (484)
Q Consensus 59 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~-~~~~------~~~~~~E~~~l~~l~hpniv~l~~~~~~-~~~~~ 129 (484)
|-++..||+|||+.||++. +...+.||||+-... .+.+ .+...+|.++.+.|.||.||+++++|.- .+.++
T Consensus 465 YLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsFC 544 (775)
T KOG1151|consen 465 YLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFC 544 (775)
T ss_pred HHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccce
Confidence 5566788999999999999 667889999986543 2222 2346789999999999999999999964 45688
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcC-CCcccccccccceeec---CCCCceeeccCCccc
Q 011519 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK-ERALYHDLNAYRIVFD---DDVNPRLSCFGLMKN 205 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~-~~ivH~Dlkp~Nill~---~~~~~kl~DfG~a~~ 205 (484)
-|+|||+|.+|+-+|+ ..+.+++.++..|+.||+.||.||.+. .+|||-||||.|||+. ..|.+||+|||+++.
T Consensus 545 TVLEYceGNDLDFYLK--QhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKI 622 (775)
T KOG1151|consen 545 TVLEYCEGNDLDFYLK--QHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKI 622 (775)
T ss_pred eeeeecCCCchhHHHH--hhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchhhh
Confidence 9999999999999997 556789999999999999999999875 5799999999999994 558899999999998
Q ss_pred cCCC-----------CcccCCCCCCCcccccCC----CCCCCCceeehHHHHHHHhhCCCCCCchh--hHHhhhcccccc
Q 011519 206 SRDG-----------RSYSTNLAFTPPEYLRTG----RVTPESVMYSFGTLLLDLLSGKHIPPSHA--LDLIRDRNIQTL 268 (484)
Q Consensus 206 ~~~~-----------~~~~~t~~y~aPE~~~~~----~~~~~~Dv~slG~~l~el~tg~~p~~~~~--~~~~~~~~~~~~ 268 (484)
.... ....||.+|++||.+.-+ .++.+.||||.|||+|..+.|+.||.... .+.+....+...
T Consensus 623 MdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlkA 702 (775)
T KOG1151|consen 623 MDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILKA 702 (775)
T ss_pred ccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhchhcc
Confidence 6543 245789999999998744 37889999999999999999999986542 222222222221
Q ss_pred ccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 269 TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 269 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
..... ...+.++.+...||++||++.-++|....++..+
T Consensus 703 tEVqF--P~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~d 741 (775)
T KOG1151|consen 703 TEVQF--PPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACD 741 (775)
T ss_pred eeccC--CCCCccCHHHHHHHHHHHHhhhhhhhhHHHHccC
Confidence 11111 1224567899999999999999999998887765
|
|
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=288.11 Aligned_cols=235 Identities=19% Similarity=0.250 Sum_probs=200.3
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCc---cHHHHHHHHHHHhcC-CCCceeeeeeeeeeCCceEEEE
Q 011519 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP---DARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVA 132 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~ 132 (484)
+++++..||+|+||.|.++. ..+.+.+|||++++.-.. +.+--+.|-++|... +-|.+++++.+|++-+.+|+||
T Consensus 350 DFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFVM 429 (683)
T KOG0696|consen 350 DFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFVM 429 (683)
T ss_pred ccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeEE
Confidence 45677778999999999998 445788999999876432 233345677777766 5789999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccC----C
Q 011519 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR----D 208 (484)
Q Consensus 133 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~----~ 208 (484)
||+.||+|--.|. .-+.+.+..+..++.+|+-||-|||++ |||+||||.+|||++.+|.+||+|||+++..- .
T Consensus 430 EyvnGGDLMyhiQ--Q~GkFKEp~AvFYAaEiaigLFFLh~k-gIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~~T 506 (683)
T KOG0696|consen 430 EYVNGGDLMYHIQ--QVGKFKEPVAVFYAAEIAIGLFFLHSK-GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDGVT 506 (683)
T ss_pred EEecCchhhhHHH--HhcccCCchhhhhhHHHHHHhhhhhcC-CeeeeeccccceEeccCCceEeeecccccccccCCcc
Confidence 9999999999887 456799999999999999999999999 99999999999999999999999999987532 2
Q ss_pred CCcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHH
Q 011519 209 GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288 (484)
Q Consensus 209 ~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 288 (484)
..+.+|||.|+|||.+...+|+.+.|.|||||+||||+.|++||.++..+.+-...... .-.+|...+.+...+
T Consensus 507 TkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~eh------nvsyPKslSkEAv~i 580 (683)
T KOG0696|consen 507 TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEH------NVSYPKSLSKEAVAI 580 (683)
T ss_pred eeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHc------cCcCcccccHHHHHH
Confidence 35789999999999999999999999999999999999999999887665554333222 124788889999999
Q ss_pred HHHHhccCCCCCC
Q 011519 289 ASRCLQYEPRERP 301 (484)
Q Consensus 289 i~~cl~~dp~~Rp 301 (484)
....|.+.|.+|.
T Consensus 581 ckg~ltK~P~kRL 593 (683)
T KOG0696|consen 581 CKGLLTKHPGKRL 593 (683)
T ss_pred HHHHhhcCCcccc
Confidence 9999999999994
|
|
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-38 Score=298.14 Aligned_cols=251 Identities=16% Similarity=0.166 Sum_probs=213.9
Q ss_pred CCCcccccccCCCCCCceEEEEEeCC-CcEEEEEEecCCCCcc---HHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEE
Q 011519 55 GFAMENIVSEHGEKAPNVVYKGKLEN-QFRIAVKRFNRSAWPD---ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (484)
Q Consensus 55 ~f~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 130 (484)
-+++.+++..||-|+||.|-++...+ ...+|+|++++....+ .+.+..|-.+|..++.|.||++|-.|.+...+|+
T Consensus 418 ~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYm 497 (732)
T KOG0614|consen 418 KLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYM 497 (732)
T ss_pred chhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhh
Confidence 35667888999999999999999544 3359999998765443 4457889999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCC
Q 011519 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR 210 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 210 (484)
.||-|-||.|+..|+ +++.|+......++..+++|++|||++ |||+|||||+|.+++.+|-+||.|||+|+....+.
T Consensus 498 LmEaClGGElWTiLr--dRg~Fdd~tarF~~acv~EAfeYLH~k-~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~ 574 (732)
T KOG0614|consen 498 LMEACLGGELWTILR--DRGSFDDYTARFYVACVLEAFEYLHRK-GIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGR 574 (732)
T ss_pred hHHhhcCchhhhhhh--hcCCcccchhhhhHHHHHHHHHHHHhc-CceeccCChhheeeccCCceEEeehhhHHHhccCC
Confidence 999999999999997 667899999999999999999999999 99999999999999999999999999999887653
Q ss_pred ---cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHH
Q 011519 211 ---SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287 (484)
Q Consensus 211 ---~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (484)
+++|||.|.|||.+.....+.+.|.||||+++|||+||.+||.+-......+..+..+- .-.+|...+....+
T Consensus 575 KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid----~i~~Pr~I~k~a~~ 650 (732)
T KOG0614|consen 575 KTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGID----KIEFPRRITKTATD 650 (732)
T ss_pred ceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhh----hhhcccccchhHHH
Confidence 67999999999999999999999999999999999999998876533333332222221 12466777888999
Q ss_pred HHHHHhccCCCCCCC-----hHHHHHHHHh
Q 011519 288 LASRCLQYEPRERPN-----PRSLVTALVT 312 (484)
Q Consensus 288 li~~cl~~dp~~Rps-----~~~il~~l~~ 312 (484)
||.+++..+|.+|.. +.+|-.|-|-
T Consensus 651 Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf 680 (732)
T KOG0614|consen 651 LIKKLCRDNPTERLGYQKGGINDIKKHRWF 680 (732)
T ss_pred HHHHHHhcCcHhhhccccCChHHHHhhhhh
Confidence 999999999999965 7888888543
|
|
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-37 Score=259.94 Aligned_cols=202 Identities=17% Similarity=0.197 Sum_probs=173.7
Q ss_pred ccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCC-ccHHHHHHHHHHHhcC-CCCceeeeeeeeeeCCceEEEEecC
Q 011519 59 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW-PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 59 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~Ey~ 135 (484)
...+.+||+|++|.|-+-+ ..+|...|+|.+...-. +..++.++|+++..+. .+|.+|.++|........||.||.|
T Consensus 48 L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M 127 (282)
T KOG0984|consen 48 LVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELM 127 (282)
T ss_pred hhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHh
Confidence 3456789999999999998 56899999999976532 3466789999987776 7999999999999999999999999
Q ss_pred CCCCHHhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC---C
Q 011519 136 PNDTLAKHLFH--WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---R 210 (484)
Q Consensus 136 ~~gsL~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~---~ 210 (484)
.- ||+.+-.+ ..++.+++..+-+|+..|+.||.|||++..+||||+||+||||+.+|+||+||||++..+.++ +
T Consensus 128 ~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiAkt 206 (282)
T KOG0984|consen 128 DT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSIAKT 206 (282)
T ss_pred hh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeehhhhHHH
Confidence 65 88887653 256789999999999999999999999888999999999999999999999999999887765 2
Q ss_pred cccCCCCCCCcccccC----CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhh
Q 011519 211 SYSTNLAFTPPEYLRT----GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIR 261 (484)
Q Consensus 211 ~~~~t~~y~aPE~~~~----~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~ 261 (484)
...|.-.|||||.+.. ..|+-+|||||||++++||.+++.|++.+..++..
T Consensus 207 ~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~q 261 (282)
T KOG0984|consen 207 MDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQ 261 (282)
T ss_pred HhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHH
Confidence 3568889999999874 35899999999999999999999998877655544
|
|
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-36 Score=301.97 Aligned_cols=246 Identities=14% Similarity=0.195 Sum_probs=203.0
Q ss_pred ccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCccHHHHHHHHHHHhcC-CCCceeeeeeeeee-----CCceEEE
Q 011519 59 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCE-----GDERLLV 131 (484)
Q Consensus 59 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~-----~~~~~lv 131 (484)
.+|+..+|.|.+|.||+++ .++++.+|||++...... .+....|..+|+.. .|||++.++|++.- ++.+|||
T Consensus 21 ~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~-deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLV 99 (953)
T KOG0587|consen 21 FEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDE-EEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLV 99 (953)
T ss_pred cEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccc-cHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEEE
Confidence 4566677999999999999 778999999998765533 35677889999988 59999999999853 5689999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC---
Q 011519 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD--- 208 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~--- 208 (484)
||||.|||..++++.-.+..+.|..+..|++.++.||.+||.. .++|||||-.|||++.++.|||+|||.+.....
T Consensus 100 MEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~n-kviHRDikG~NiLLT~e~~VKLvDFGvSaQldsT~g 178 (953)
T KOG0587|consen 100 MEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNN-KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDSTVG 178 (953)
T ss_pred eeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhc-ceeeecccCceEEEeccCcEEEeeeeeeeeeecccc
Confidence 9999999999999876778899999999999999999999998 999999999999999999999999999876543
Q ss_pred -CCcccCCCCCCCcccccC-----CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHH
Q 011519 209 -GRSYSTNLAFTPPEYLRT-----GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG 282 (484)
Q Consensus 209 -~~~~~~t~~y~aPE~~~~-----~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (484)
..+..|||.|||||++.- ..|+.++|+||||++.+||.-|.+|+......... +.....+.+.-.-|...+
T Consensus 179 rRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraL---F~IpRNPPPkLkrp~kWs 255 (953)
T KOG0587|consen 179 RRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRAL---FLIPRNPPPKLKRPKKWS 255 (953)
T ss_pred cccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhh---ccCCCCCCccccchhhHH
Confidence 457889999999999863 34788999999999999999999775432111111 111111222222356678
Q ss_pred HHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 283 TELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 283 ~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
..+.++|..||.+|..+||++.++++|
T Consensus 256 ~~FndFIs~cL~Kd~e~RP~~~~ll~h 282 (953)
T KOG0587|consen 256 KKFNDFISTCLVKDYEQRPSTEELLKH 282 (953)
T ss_pred HHHHHHHHHHHhhccccCcchhhhccC
Confidence 999999999999999999999999877
|
|
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=302.44 Aligned_cols=250 Identities=20% Similarity=0.279 Sum_probs=207.0
Q ss_pred cccccCCCCCCceEEEEE-eCCC----cEEEEEEecCCCC-ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEe
Q 011519 60 NIVSEHGEKAPNVVYKGK-LENQ----FRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (484)
Q Consensus 60 ~~~~~lG~G~~g~Vy~~~-~~~~----~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 133 (484)
+..+.||.|+||+||+|. .+.| -+||||++..... +....++.|+-+|.+|+|||++++++++.... +-||++
T Consensus 699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq 777 (1177)
T KOG1025|consen 699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQ 777 (1177)
T ss_pred hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHH
Confidence 345678999999999998 3443 5689999876543 34678999999999999999999999998765 889999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCCc--
Q 011519 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS-- 211 (484)
Q Consensus 134 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~-- 211 (484)
|+++|+|.++++.+ +.++.....+.|..||++||.|||.+ ++|||||-..|||+..-..+||.|||+++.......
T Consensus 778 ~mP~G~LlDyvr~h-r~~igsq~lLnw~~QIAkgM~YLe~q-rlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey 855 (1177)
T KOG1025|consen 778 LMPLGCLLDYVREH-RDNIGSQDLLNWCYQIAKGMKYLEEQ-RLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEY 855 (1177)
T ss_pred hcccchHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHHhc-chhhhhhhhhheeecCCCeEEEEecchhhccCcccccc
Confidence 99999999999763 45688899999999999999999998 999999999999999999999999999998765432
Q ss_pred ----ccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHHHH
Q 011519 212 ----YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 286 (484)
Q Consensus 212 ----~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 286 (484)
....+.|||-|.+....++.++|||||||++||++| |..|+.+...+.+.+ +.....+-..|+.++-++.
T Consensus 856 ~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~d-----lle~geRLsqPpiCtiDVy 930 (1177)
T KOG1025|consen 856 SAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPD-----LLEKGERLSQPPICTIDVY 930 (1177)
T ss_pred cccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhH-----HHhccccCCCCCCccHHHH
Confidence 122467999999999999999999999999999999 666766554433321 2222222234677889999
Q ss_pred HHHHHHhccCCCCCCChHHHHHHHHhhhcCC
Q 011519 287 RLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (484)
Q Consensus 287 ~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 317 (484)
.++.+||..|++.||+++++...+.++.+++
T Consensus 931 ~~mvkCwmid~~~rp~fkel~~~fs~~ardp 961 (1177)
T KOG1025|consen 931 MVMVKCWMIDADSRPTFKELAEEFSRMARDP 961 (1177)
T ss_pred HHHHHHhccCcccCccHHHHHHHHHHHhcCc
Confidence 9999999999999999999999988876654
|
|
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-37 Score=269.40 Aligned_cols=253 Identities=17% Similarity=0.228 Sum_probs=194.5
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCC--CCccHHHHHHHHHHHhcCCCCceeeeeeeeeeC--------
Q 011519 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRS--AWPDARQFLEEARAVGQLRNRRLANLLGCCCEG-------- 125 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-------- 125 (484)
+.|+.+.++|+|.||.||+|+ ..+|+.||+|++-.. ...-....++|+++|..|+|+|++.++..|...
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r 96 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR 96 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence 456667788999999999999 556888999876332 112234578999999999999999999988542
Q ss_pred CceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccc
Q 011519 126 DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN 205 (484)
Q Consensus 126 ~~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 205 (484)
..+|+||.+|+. +|..+|.+ ....++..++.+++.++..||.|+|+. .|+|||+|++|+||+.+|.+||+|||+++.
T Consensus 97 ~t~ylVf~~ceh-DLaGlLsn-~~vr~sls~Ikk~Mk~Lm~GL~~iHr~-kilHRDmKaaNvLIt~dgilklADFGlar~ 173 (376)
T KOG0669|consen 97 ATFYLVFDFCEH-DLAGLLSN-RKVRFSLSEIKKVMKGLMNGLYYIHRN-KILHRDMKAANVLITKDGILKLADFGLARA 173 (376)
T ss_pred ceeeeeHHHhhh-hHHHHhcC-ccccccHHHHHHHHHHHHHHHHHHHHh-hHHhhcccHhhEEEcCCceEEeeccccccc
Confidence 347999999977 89999864 445799999999999999999999998 999999999999999999999999999976
Q ss_pred cCCCC--------cccCCCCCCCcccccCC-CCCCCCceeehHHHHHHHhhCCCCCCchhhHH----hh---hccccccc
Q 011519 206 SRDGR--------SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDL----IR---DRNIQTLT 269 (484)
Q Consensus 206 ~~~~~--------~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~----~~---~~~~~~~~ 269 (484)
+.... ....|..|.+||.+.|. .++++.|||+-|||+.||+||.+.+.+..... +. .....+..
T Consensus 174 fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevW 253 (376)
T KOG0669|consen 174 FSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVW 253 (376)
T ss_pred eecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccC
Confidence 54432 22348999999999875 49999999999999999999997765442110 00 00000000
Q ss_pred c--------------ccccCCC--------ChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHh
Q 011519 270 D--------------SCLEGQF--------SSDEGTELVRLASRCLQYEPRERPNPRSLVTALVT 312 (484)
Q Consensus 270 ~--------------~~~~~~~--------~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~ 312 (484)
+ +...+.+ |-.-.++..+|+..+|..||.+|++++++++|-.-
T Consensus 254 P~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F 318 (376)
T KOG0669|consen 254 PNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFF 318 (376)
T ss_pred CCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhh
Confidence 0 0000110 11113578899999999999999999999998544
|
|
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-35 Score=307.15 Aligned_cols=248 Identities=21% Similarity=0.289 Sum_probs=201.7
Q ss_pred cccCCCCCCceEEEEEeC--------CCcEEEEEEecCCCCc-cHHHHHHHHHHHhcC-CCCceeeeeeeeeeCCceEEE
Q 011519 62 VSEHGEKAPNVVYKGKLE--------NQFRIAVKRFNRSAWP-DARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLV 131 (484)
Q Consensus 62 ~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv 131 (484)
.+.||+|.||.|++|... ....||||.++..... ..+.+..|+.+|..+ +||||+.++|+|...+..++|
T Consensus 301 ~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~~v 380 (609)
T KOG0200|consen 301 GKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLYVI 380 (609)
T ss_pred cceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceEEE
Confidence 347899999999999831 1457999999865433 466799999999999 699999999999999999999
Q ss_pred EecCCCCCHHhhhccCC------C--------CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCcee
Q 011519 132 AEYMPNDTLAKHLFHWE------T--------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRL 197 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~~------~--------~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl 197 (484)
+||+..|+|.++|++.+ . ..++..+.+.++.||+.|++||++. ++|||||-..|||++.+..+||
T Consensus 381 ~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~-~~vHRDLAaRNVLi~~~~~~kI 459 (609)
T KOG0200|consen 381 VEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV-PCVHRDLAARNVLITKNKVIKI 459 (609)
T ss_pred EEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC-CccchhhhhhhEEecCCCEEEE
Confidence 99999999999997543 0 1388999999999999999999999 9999999999999999999999
Q ss_pred eccCCccccCCCCc-----ccCC--CCCCCcccccCCCCCCCCceeehHHHHHHHhhCCC-CCCchhhHHhhhccccccc
Q 011519 198 SCFGLMKNSRDGRS-----YSTN--LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKH-IPPSHALDLIRDRNIQTLT 269 (484)
Q Consensus 198 ~DfG~a~~~~~~~~-----~~~t--~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~-p~~~~~~~~~~~~~~~~~~ 269 (484)
+|||+++....... ..++ ..|||||.+....++.++|||||||+|||++|... |+++.... ..+....
T Consensus 460 aDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~----~~l~~~l 535 (609)
T KOG0200|consen 460 ADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPT----EELLEFL 535 (609)
T ss_pred ccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcH----HHHHHHH
Confidence 99999996544322 1222 34999999999889999999999999999999654 44431100 0111122
Q ss_pred cccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhh
Q 011519 270 DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQ 314 (484)
Q Consensus 270 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~ 314 (484)
....+...|..++.++.+++..||+.+|++||++.++.+.|....
T Consensus 536 ~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l 580 (609)
T KOG0200|consen 536 KEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHL 580 (609)
T ss_pred hcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHH
Confidence 233334456777899999999999999999999999999998853
|
|
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-35 Score=275.26 Aligned_cols=250 Identities=18% Similarity=0.209 Sum_probs=191.3
Q ss_pred ccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhc--CCCCceeeeeeeeeeC----CceEEEE
Q 011519 59 ENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQ--LRNRRLANLLGCCCEG----DERLLVA 132 (484)
Q Consensus 59 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~hpniv~l~~~~~~~----~~~~lv~ 132 (484)
-.+++.+|+|.||.||+|.++ |+.||||++... +.+.+.+|.++.+. |+|+||+.+++.-..+ .++|||+
T Consensus 213 I~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~sr---dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvT 288 (513)
T KOG2052|consen 213 IVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSR---DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVT 288 (513)
T ss_pred eEEEEEecCccccceeecccc-CCceEEEEeccc---chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEee
Confidence 356788899999999999995 558999999643 45678888888877 4999999999875433 2589999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhc-------CCCcccccccccceeecCCCCceeeccCCccc
Q 011519 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTS-------KERALYHDLNAYRIVFDDDVNPRLSCFGLMKN 205 (484)
Q Consensus 133 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~-------~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 205 (484)
+|.+.|||.|||. ...++....++++..++.||++||. ++.|.|||||+.|||+..+|+.-|+|+|||..
T Consensus 289 dYHe~GSL~DyL~---r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~ 365 (513)
T KOG2052|consen 289 DYHEHGSLYDYLN---RNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR 365 (513)
T ss_pred ecccCCcHHHHHh---hccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEE
Confidence 9999999999995 4679999999999999999999997 35699999999999999999999999999976
Q ss_pred cCCC--------CcccCCCCCCCcccccCCC----C--CCCCceeehHHHHHHHhhCC----------CCCCchhhHHhh
Q 011519 206 SRDG--------RSYSTNLAFTPPEYLRTGR----V--TPESVMYSFGTLLLDLLSGK----------HIPPSHALDLIR 261 (484)
Q Consensus 206 ~~~~--------~~~~~t~~y~aPE~~~~~~----~--~~~~Dv~slG~~l~el~tg~----------~p~~~~~~~~~~ 261 (484)
.... ...+||-.|||||++...- + -..+||||||.|+||+...- .||.......-.
T Consensus 366 h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs 445 (513)
T KOG2052|consen 366 HDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPS 445 (513)
T ss_pred ecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCC
Confidence 5443 3467999999999987431 2 22689999999999997642 233221110000
Q ss_pred hccccc-cccccccCCC-----ChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhc
Q 011519 262 DRNIQT-LTDSCLEGQF-----SSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 315 (484)
Q Consensus 262 ~~~~~~-~~~~~~~~~~-----~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~ 315 (484)
...+.. +-...+++.+ ....-..+.++++.||..+|..|.|+=.|-..|..+..
T Consensus 446 ~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 446 FEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred HHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 000111 0111112222 23456778999999999999999999999998888764
|
|
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-35 Score=303.86 Aligned_cols=252 Identities=17% Similarity=0.189 Sum_probs=169.5
Q ss_pred CCCcccccccCCCCCCceEEEEEe-CC----CcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeee------ee
Q 011519 55 GFAMENIVSEHGEKAPNVVYKGKL-EN----QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGC------CC 123 (484)
Q Consensus 55 ~f~~~~~~~~lG~G~~g~Vy~~~~-~~----~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~------~~ 123 (484)
...+|.+.+.||+|+||.||+|+. .+ +..||||++.... ..+.+..+ .+....+.+++.++.. ..
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~--~~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYG--AVEIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccc--hhHHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 345778888999999999999995 45 7899999986533 11222222 1222222333322222 23
Q ss_pred eCCceEEEEecCCCCCHHhhhccCCCC------------------CCCHHHHHHHHHHHHHHHHHhhcCCCccccccccc
Q 011519 124 EGDERLLVAEYMPNDTLAKHLFHWETQ------------------PMKWAMRLRVALHIAEALEYCTSKERALYHDLNAY 185 (484)
Q Consensus 124 ~~~~~~lv~Ey~~~gsL~~~l~~~~~~------------------~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~ 185 (484)
.....+||+||+++++|.+++...... ......+..++.||+.||.|||+. +|+||||||+
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~-gIiHRDLKP~ 284 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST-GIVHRDVKPQ 284 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC-CEEeCcCCHH
Confidence 556789999999999999998642110 112344668999999999999998 9999999999
Q ss_pred ceeecC-CCCceeeccCCccccCCC-----CcccCCCCCCCcccccCC----------------------CCCCCCceee
Q 011519 186 RIVFDD-DVNPRLSCFGLMKNSRDG-----RSYSTNLAFTPPEYLRTG----------------------RVTPESVMYS 237 (484)
Q Consensus 186 Nill~~-~~~~kl~DfG~a~~~~~~-----~~~~~t~~y~aPE~~~~~----------------------~~~~~~Dv~s 237 (484)
|||++. ++.+||+|||+++..... ....+|+.|+|||.+... .++.++||||
T Consensus 285 NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwS 364 (566)
T PLN03225 285 NIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYS 364 (566)
T ss_pred HEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHH
Confidence 999985 689999999999865432 346788999999965422 2345679999
Q ss_pred hHHHHHHHhhCCCCCCchhhHHhhh---c--ccccc---ccccccCC------CChHHHHHHHHHHHHHhccCCCCCCCh
Q 011519 238 FGTLLLDLLSGKHIPPSHALDLIRD---R--NIQTL---TDSCLEGQ------FSSDEGTELVRLASRCLQYEPRERPNP 303 (484)
Q Consensus 238 lG~~l~el~tg~~p~~~~~~~~~~~---~--~~~~~---~~~~~~~~------~~~~~~~~l~~li~~cl~~dp~~Rps~ 303 (484)
|||++|||+++..++.......... . ....+ ........ ..........+|+.+||+.||.+|||+
T Consensus 365 lGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta 444 (566)
T PLN03225 365 AGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRISA 444 (566)
T ss_pred HHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccCCCH
Confidence 9999999999876544332211110 0 00000 00000000 001112345689999999999999999
Q ss_pred HHHHHHHH
Q 011519 304 RSLVTALV 311 (484)
Q Consensus 304 ~~il~~l~ 311 (484)
.++++|-+
T Consensus 445 ~e~L~Hpf 452 (566)
T PLN03225 445 KAALAHPY 452 (566)
T ss_pred HHHhCCcC
Confidence 99999844
|
|
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-36 Score=256.02 Aligned_cols=257 Identities=19% Similarity=0.258 Sum_probs=205.0
Q ss_pred cCHHHHHHHhcCCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCC-CCceeeeeee
Q 011519 44 YSIETLRTATSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGC 121 (484)
Q Consensus 44 ~~~~~~~~~~~~f~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~ 121 (484)
++++.......+-++|++++++|+|-++.||.|. ..+++.++||+++.- ..+.+.+|+.+|..|+ ||||+++++.
T Consensus 25 WdYE~~~i~wg~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV---kkkKIkREikIL~nL~gg~NIi~L~Di 101 (338)
T KOG0668|consen 25 WDYESLVIDWGNQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV---KKKKIKREIKILQNLRGGPNIIKLLDI 101 (338)
T ss_pred cchhheeeeccccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH---HHHHHHHHHHHHHhccCCCCeeehhhh
Confidence 5667766667788899999999999999999999 677889999999753 3467889999999997 9999999999
Q ss_pred eeeCC--ceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecC-CCCceee
Q 011519 122 CCEGD--ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-DVNPRLS 198 (484)
Q Consensus 122 ~~~~~--~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~-~~~~kl~ 198 (484)
..++. .+.||+||+.+.+...+. ..++...+..++.+++.||.|+|+. ||+|||+||.|++||. ...++|+
T Consensus 102 V~Dp~SktpaLiFE~v~n~Dfk~ly-----~tl~d~dIryY~~elLkALdyCHS~-GImHRDVKPhNvmIdh~~rkLrlI 175 (338)
T KOG0668|consen 102 VKDPESKTPSLIFEYVNNTDFKQLY-----PTLTDYDIRYYIYELLKALDYCHSM-GIMHRDVKPHNVMIDHELRKLRLI 175 (338)
T ss_pred hcCccccCchhHhhhhccccHHHHh-----hhhchhhHHHHHHHHHHHHhHHHhc-CcccccCCcceeeechhhceeeee
Confidence 97754 578999999997777655 3578888999999999999999999 9999999999999994 5669999
Q ss_pred ccCCccccCCCCcc---cCCCCCCCcccccC-CCCCCCCceeehHHHHHHHhhCCCCCCchhhH---Hhh----------
Q 011519 199 CFGLMKNSRDGRSY---STNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALD---LIR---------- 261 (484)
Q Consensus 199 DfG~a~~~~~~~~~---~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~---~~~---------- 261 (484)
|+|+|.....+..+ ..+..|--||.+.. ..++..-|+|||||++..|+..+.||.....+ ..+
T Consensus 176 DWGLAEFYHp~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el 255 (338)
T KOG0668|consen 176 DWGLAEFYHPGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDEL 255 (338)
T ss_pred ecchHhhcCCCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHH
Confidence 99999988776544 34667899999876 45889999999999999999999998632110 000
Q ss_pred -----------hccccc--------cccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 262 -----------DRNIQT--------LTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 262 -----------~~~~~~--------~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
...... ............-.++++.+|+...|..|-.+|+|+.|...|
T Consensus 256 ~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~H 322 (338)
T KOG0668|consen 256 YAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAH 322 (338)
T ss_pred HHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcC
Confidence 000111 011111111122346899999999999999999999999988
|
|
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-35 Score=286.11 Aligned_cols=248 Identities=16% Similarity=0.162 Sum_probs=193.3
Q ss_pred CCcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCcc---HHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEE
Q 011519 56 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD---ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 131 (484)
-+.+-.|+.||-|+||.|.++. .++...+|+|.+.+.+.-. ......|-+||..-..+.||+|+-.|.+.+.+|+|
T Consensus 628 KSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFV 707 (1034)
T KOG0608|consen 628 KSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFV 707 (1034)
T ss_pred ccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEE
Confidence 3445677889999999999999 5667789999997654322 23467899999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC---
Q 011519 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD--- 208 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~--- 208 (484)
|+|++||++-++|. +.+.|.+..+..++.++..|+++.|.. |+|||||||+|||||.+|.+||+||||+.-+.-
T Consensus 708 MdYIPGGDmMSLLI--rmgIFeE~LARFYIAEltcAiesVHkm-GFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHd 784 (1034)
T KOG0608|consen 708 MDYIPGGDMMSLLI--RMGIFEEDLARFYIAELTCAIESVHKM-GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD 784 (1034)
T ss_pred EeccCCccHHHHHH--HhccCHHHHHHHHHHHHHHHHHHHHhc-cceecccCccceEEccCCceeeeeccccccceeccc
Confidence 99999999999987 567899999999999999999999999 999999999999999999999999999753210
Q ss_pred -------------------------------------------CCcccCCCCCCCcccccCCCCCCCCceeehHHHHHHH
Q 011519 209 -------------------------------------------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245 (484)
Q Consensus 209 -------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el 245 (484)
....+||+.|+|||++....++..+|.||.|||||||
T Consensus 785 skYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em 864 (1034)
T KOG0608|consen 785 SKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEM 864 (1034)
T ss_pred cccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHH
Confidence 0134689999999999988999999999999999999
Q ss_pred hhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHHhccCCCCCC---ChHHHHHH
Q 011519 246 LSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP---NPRSLVTA 309 (484)
Q Consensus 246 ~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp---s~~~il~~ 309 (484)
+.|+.||....--.... .+..+ ...+.-.+...++.++.++|.+++ .+++.|. .+++|..|
T Consensus 865 ~~g~~pf~~~tp~~tq~-kv~nw-~~~l~~~~~~~ls~e~~~li~kLc-~sad~RLGkng~d~vKaH 928 (1034)
T KOG0608|consen 865 LVGQPPFLADTPGETQY-KVINW-RNFLHIPYQGNLSKEALDLIQKLC-CSADSRLGKNGADQVKAH 928 (1034)
T ss_pred hhCCCCccCCCCCccee-eeeeh-hhccccccccccCHHHHHHHHHHh-cChhhhhcccchhhhhcC
Confidence 99999886542211111 11111 111111223445667777776654 3566664 34556555
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-34 Score=267.90 Aligned_cols=235 Identities=21% Similarity=0.247 Sum_probs=193.6
Q ss_pred CCceEEEEEeC-CCcEEEEEEecCCCCcc-HHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCCCCCHHhhhcc
Q 011519 69 APNVVYKGKLE-NQFRIAVKRFNRSAWPD-ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFH 146 (484)
Q Consensus 69 ~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~~gsL~~~l~~ 146 (484)
+||.||+|... +++.+++|++....... .+.+.+|++.+++++|+||+++++++......++++||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 57899999964 58999999998665444 67899999999999999999999999999999999999999999999963
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC---CcccCCCCCCCccc
Q 011519 147 WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---RSYSTNLAFTPPEY 223 (484)
Q Consensus 147 ~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~---~~~~~t~~y~aPE~ 223 (484)
...+++..++.++.+++.+|.|||+. +++|+||+|+||++++++.++|+|||.+...... ....++..|++||.
T Consensus 81 --~~~~~~~~~~~~~~~l~~~l~~lh~~-~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~ 157 (244)
T smart00220 81 --RGRLSEDEARFYARQILSALEYLHSN-GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPEYMAPEV 157 (244)
T ss_pred --ccCCCHHHHHHHHHHHHHHHHHHHHc-CeecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCcCCCCHHH
Confidence 23389999999999999999999998 9999999999999999999999999998876553 45567889999999
Q ss_pred ccCCCCCCCCceeehHHHHHHHhhCCCCCCc-hhhHHhhhccccccccccccCCCChHHHHHHHHHHHHHhccCCCCCCC
Q 011519 224 LRTGRVTPESVMYSFGTLLLDLLSGKHIPPS-HALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPN 302 (484)
Q Consensus 224 ~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 302 (484)
+.+..++.++||||||+++++|++|..|+.. ................. .......+.++.+++.+||..+|++||+
T Consensus 158 ~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~~p~~Rp~ 234 (244)
T smart00220 158 LLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPF---PPPEWKISPEAKDLIRKLLVKDPEKRLT 234 (244)
T ss_pred HccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCC---ccccccCCHHHHHHHHHHccCCchhccC
Confidence 9888889999999999999999999988755 22211111111110000 0000115678999999999999999999
Q ss_pred hHHHHHH
Q 011519 303 PRSLVTA 309 (484)
Q Consensus 303 ~~~il~~ 309 (484)
+.+++++
T Consensus 235 ~~~~~~~ 241 (244)
T smart00220 235 AEEALQH 241 (244)
T ss_pred HHHHhhC
Confidence 9999874
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-34 Score=287.60 Aligned_cols=254 Identities=15% Similarity=0.164 Sum_probs=179.3
Q ss_pred CcccccccCCCCCCceEEEEEe-----------------CCCcEEEEEEecCCCCccHHHH--------------HHHHH
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-----------------ENQFRIAVKRFNRSAWPDARQF--------------LEEAR 105 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-----------------~~~~~vavK~~~~~~~~~~~~~--------------~~E~~ 105 (484)
++|++.++||+|+||+||+|.. ..++.||||+++.......++| ..|+.
T Consensus 145 d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~~ 224 (507)
T PLN03224 145 DDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEAY 224 (507)
T ss_pred cCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHHH
Confidence 3566778889999999999963 2356899999875433222333 44677
Q ss_pred HHhcCCCCce-----eeeeeeeee--------CCceEEEEecCCCCCHHhhhccCC----------------------CC
Q 011519 106 AVGQLRNRRL-----ANLLGCCCE--------GDERLLVAEYMPNDTLAKHLFHWE----------------------TQ 150 (484)
Q Consensus 106 ~l~~l~hpni-----v~l~~~~~~--------~~~~~lv~Ey~~~gsL~~~l~~~~----------------------~~ 150 (484)
++.+++|.++ ++++++|.. .+..+|||||+++|+|.++++... ..
T Consensus 225 ~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~ 304 (507)
T PLN03224 225 MCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQD 304 (507)
T ss_pred HHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccc
Confidence 7777766554 667777643 356899999999999999986321 11
Q ss_pred CCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCC-----cccCCCCCCCccccc
Q 011519 151 PMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-----SYSTNLAFTPPEYLR 225 (484)
Q Consensus 151 ~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~-----~~~~t~~y~aPE~~~ 225 (484)
.+++..+..++.|++.||.|||+. +++||||||+|||++.++.+||+|||++....... ...+|+.|+|||.+.
T Consensus 305 ~~~~~~~~~i~~ql~~aL~~lH~~-~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~ 383 (507)
T PLN03224 305 KRDINVIKGVMRQVLTGLRKLHRI-GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELV 383 (507)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhhc
Confidence 246778899999999999999998 99999999999999999999999999987643321 123478999999876
Q ss_pred CCCC----------------------CCCCceeehHHHHHHHhhCCCCCCchhh---HHhh--hcccc---ccccccccC
Q 011519 226 TGRV----------------------TPESVMYSFGTLLLDLLSGKHIPPSHAL---DLIR--DRNIQ---TLTDSCLEG 275 (484)
Q Consensus 226 ~~~~----------------------~~~~Dv~slG~~l~el~tg~~p~~~~~~---~~~~--~~~~~---~~~~~~~~~ 275 (484)
.... ..+.||||+||++++|++|..++..... .... ..... ........-
T Consensus 384 ~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~~ 463 (507)
T PLN03224 384 MPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKYDF 463 (507)
T ss_pred CCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCCCc
Confidence 4221 1347999999999999999853322100 0000 00000 000001111
Q ss_pred CCChHHHHHHHHHHHHHhccCC---CCCCChHHHHHHHH
Q 011519 276 QFSSDEGTELVRLASRCLQYEP---RERPNPRSLVTALV 311 (484)
Q Consensus 276 ~~~~~~~~~l~~li~~cl~~dp---~~Rps~~~il~~l~ 311 (484)
......++...+|+.++|..+| .+|+|+.++++|-+
T Consensus 464 ~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~ 502 (507)
T PLN03224 464 SLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRF 502 (507)
T ss_pred ccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCC
Confidence 1123456889999999999876 68999999999854
|
|
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-35 Score=264.49 Aligned_cols=241 Identities=17% Similarity=0.242 Sum_probs=197.2
Q ss_pred CCcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCcc---HHHHHHHHHHHhcC-CCCceeeeeeeeeeCCceEE
Q 011519 56 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD---ARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLL 130 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~l 130 (484)
..++++++.||+|+|.+|..+. ..+.+.+|+|++++....+ ..=...|-.+..+- +||.+|-++.+|++...+|+
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff 328 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF 328 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence 4567788889999999999999 5678899999998654332 33345666666665 69999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCcccc----
Q 011519 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS---- 206 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~---- 206 (484)
|.||++||+|--++. +.+.++++.+..+..+|+.||.|||+. |||+||||.+|||+|..|.+||+|+|+++..
T Consensus 329 vieyv~ggdlmfhmq--rqrklpeeharfys~ei~lal~flh~r-giiyrdlkldnvlldaeghikltdygmcke~l~~g 405 (593)
T KOG0695|consen 329 VIEYVNGGDLMFHMQ--RQRKLPEEHARFYSAEICLALNFLHER-GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPG 405 (593)
T ss_pred EEEEecCcceeeehh--hhhcCcHHHhhhhhHHHHHHHHHHhhc-CeeeeeccccceEEccCCceeecccchhhcCCCCC
Confidence 999999999987776 556799999999999999999999999 9999999999999999999999999998753
Q ss_pred CCCCcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHH----hhhccccccccccccCCCChHHH
Q 011519 207 RDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDL----IRDRNIQTLTDSCLEGQFSSDEG 282 (484)
Q Consensus 207 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 282 (484)
...++.+|||.|+|||.+++..|....|.|+|||+++||+.|+.||.--..+. .....++.+..... ++|...+
T Consensus 406 d~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqi--riprsls 483 (593)
T KOG0695|consen 406 DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQI--RIPRSLS 483 (593)
T ss_pred cccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcc--cccceee
Confidence 22467899999999999999999999999999999999999999986321111 11111122222211 3566677
Q ss_pred HHHHHHHHHHhccCCCCCC
Q 011519 283 TELVRLASRCLQYEPRERP 301 (484)
Q Consensus 283 ~~l~~li~~cl~~dp~~Rp 301 (484)
.....+++.-|.+||.+|.
T Consensus 484 vkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 484 VKASHVLKGFLNKDPKERL 502 (593)
T ss_pred hhhHHHHHHhhcCCcHHhc
Confidence 8888999999999999994
|
|
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-35 Score=256.02 Aligned_cols=245 Identities=18% Similarity=0.266 Sum_probs=189.4
Q ss_pred ccCCCCCCceEEEEE-eCCCcEEEEEEecCCC--CccHHHHHHHHHHHhcCCCCceeeeeeeeeeC-----CceEEEEec
Q 011519 63 SEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEG-----DERLLVAEY 134 (484)
Q Consensus 63 ~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-----~~~~lv~Ey 134 (484)
+.||.|+||+||.++ -++|+.||+|++..-. ....+++.+|+.+|..++|.|++..++...-. .++|+|+|+
T Consensus 59 RPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TEL 138 (449)
T KOG0664|consen 59 RPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTEL 138 (449)
T ss_pred CcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHHH
Confidence 567999999999999 5789999999986432 22357899999999999999999999887543 357899999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCCc---
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS--- 211 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~--- 211 (484)
+.. +|.++|- ....++.+.+.-+.+||++||.|||+. +|+||||||.|.|+++|..+||||||+++.......
T Consensus 139 mQS-DLHKIIV--SPQ~Ls~DHvKVFlYQILRGLKYLHsA-~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~hM 214 (449)
T KOG0664|consen 139 MQS-DLHKIIV--SPQALTPDHVKVFVYQILRGLKYLHTA-NILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRLNM 214 (449)
T ss_pred HHh-hhhheec--cCCCCCcchhhhhHHHHHhhhHHHhhc-chhhccCCCccEEeccCceEEecccccccccchhhhhhh
Confidence 955 8999886 566799999999999999999999999 999999999999999999999999999998665432
Q ss_pred --ccCCCCCCCcccccCCC-CCCCCceeehHHHHHHHhhCCCCCCch----hhHHh----hhccccc-----------cc
Q 011519 212 --YSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSH----ALDLI----RDRNIQT-----------LT 269 (484)
Q Consensus 212 --~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~tg~~p~~~~----~~~~~----~~~~~~~-----------~~ 269 (484)
...|..|.|||.++|.. |+.+.||||.||+..||+..+..|... ..+.+ .....+. +.
T Consensus 215 TqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~L 294 (449)
T KOG0664|consen 215 THEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVL 294 (449)
T ss_pred HHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhh
Confidence 34467899999999854 999999999999999999888665421 11111 0000000 00
Q ss_pred ccccc-CC--------CChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 270 DSCLE-GQ--------FSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 270 ~~~~~-~~--------~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
....+ .. -+.....+...++..++..||+.|.+..+.+.++.
T Consensus 295 R~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~ 345 (449)
T KOG0664|consen 295 RAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRY 345 (449)
T ss_pred ccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccccc
Confidence 00000 00 11122345678888999999999999999988854
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-34 Score=281.36 Aligned_cols=248 Identities=15% Similarity=0.173 Sum_probs=206.3
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecC
Q 011519 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~ 135 (484)
.+|+++.++|.|+||.|||++ ..+++..|||+++.....+..-..+|+-+++..+|||||.++|.+...+.+||+||||
T Consensus 15 ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEyc 94 (829)
T KOG0576|consen 15 DDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYC 94 (829)
T ss_pred cchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEec
Confidence 578899999999999999999 6789999999999877667777889999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccC----CCCc
Q 011519 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR----DGRS 211 (484)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~----~~~~ 211 (484)
.||+|.+.-+ -.+++++.++..+.+..++||+|||+. |-+|||||-.|||+++.|.+|++|||.+-... ...+
T Consensus 95 gggslQdiy~--~TgplselqiayvcRetl~gl~ylhs~-gk~hRdiKGanilltd~gDvklaDfgvsaqitati~Krks 171 (829)
T KOG0576|consen 95 GGGSLQDIYH--VTGPLSELQIAYVCRETLQGLKYLHSQ-GKIHRDIKGANILLTDEGDVKLADFGVSAQITATIAKRKS 171 (829)
T ss_pred CCCcccceee--ecccchhHHHHHHHhhhhccchhhhcC-CcccccccccceeecccCceeecccCchhhhhhhhhhhhc
Confidence 9999999876 678899999999999999999999999 99999999999999999999999999876543 4578
Q ss_pred ccCCCCCCCccccc---CCCCCCCCceeehHHHHHHHhhCCCCCCch-hhHHhhhccccccccccccCCCChHHHHHHHH
Q 011519 212 YSTNLAFTPPEYLR---TGRVTPESVMYSFGTLLLDLLSGKHIPPSH-ALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287 (484)
Q Consensus 212 ~~~t~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~tg~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (484)
..||+.|||||+.. .+.|...+|||++|++..|+---++|.... ...... -.....+++... .-+...++.+.+
T Consensus 172 fiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~-LmTkS~~qpp~l-kDk~kws~~fh~ 249 (829)
T KOG0576|consen 172 FIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALF-LMTKSGFQPPTL-KDKTKWSEFFHN 249 (829)
T ss_pred ccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHH-HhhccCCCCCcc-cCCccchHHHHH
Confidence 89999999999875 456899999999999999998877553221 111110 000111111111 112345678999
Q ss_pred HHHHHhccCCCCCCChHHHHHH
Q 011519 288 LASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 288 li~~cl~~dp~~Rps~~~il~~ 309 (484)
|++.||.++|++|||++.++.|
T Consensus 250 fvK~altknpKkRptaeklL~h 271 (829)
T KOG0576|consen 250 FVKGALTKNPKKRPTAEKLLQH 271 (829)
T ss_pred HHHHHhcCCCccCCChhhheec
Confidence 9999999999999999988875
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-34 Score=285.68 Aligned_cols=240 Identities=20% Similarity=0.220 Sum_probs=181.8
Q ss_pred CCcccccccCCCCCCce-EEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhcC-CCCceeeeeeeeeeCCceEEEEe
Q 011519 56 FAMENIVSEHGEKAPNV-VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAE 133 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~E 133 (484)
|...+++ |.|+.|+ ||+|.. .|+.||||++-... ..-..+|+..|+.- .|||||++++.-.+....||..|
T Consensus 511 ~~~~eil---G~Gs~Gt~Vf~G~y-e~R~VAVKrll~e~---~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalE 583 (903)
T KOG1027|consen 511 FSPKEIL---GYGSNGTVVFRGVY-EGREVAVKRLLEEF---FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALE 583 (903)
T ss_pred eccHHHc---ccCCCCcEEEEEee-CCceehHHHHhhHh---HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEeh
Confidence 4444555 7777764 899998 56699999985432 33467999999998 59999999999999999999999
Q ss_pred cCCCCCHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecC---C--CCceeeccCCcccc
Q 011519 134 YMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD---D--VNPRLSCFGLMKNS 206 (484)
Q Consensus 134 y~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~---~--~~~kl~DfG~a~~~ 206 (484)
.|.. ||.+++... +.....-...+.+..|++.||++||+. +||||||||.||||+. + ..++|+|||+++..
T Consensus 584 LC~~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl-~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl 661 (903)
T KOG1027|consen 584 LCAC-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL-KIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKL 661 (903)
T ss_pred Hhhh-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc-ccccccCCCceEEEEccCCCcceeEEeccccccccc
Confidence 9966 999999742 111111134578899999999999998 9999999999999975 3 46899999999876
Q ss_pred CCC-------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCC-CCCCchhhHHhhhccccccccccccCCCC
Q 011519 207 RDG-------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGK-HIPPSHALDLIRDRNIQTLTDSCLEGQFS 278 (484)
Q Consensus 207 ~~~-------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (484)
..+ ....||-+|+|||++....-+.+.|||||||++|..++|. .||........ ..+.....-. ...
T Consensus 662 ~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~--NIl~~~~~L~---~L~ 736 (903)
T KOG1027|consen 662 AGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQA--NILTGNYTLV---HLE 736 (903)
T ss_pred CCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhh--hhhcCcccee---eec
Confidence 543 3467899999999999888888999999999999999985 55543221100 0111100000 000
Q ss_pred hHHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 279 SDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 279 ~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
+....+..+||.+|+.++|..||++.+|+.|
T Consensus 737 ~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~H 767 (903)
T KOG1027|consen 737 PLPDCEAKDLISRMLNPDPQLRPSATDVLNH 767 (903)
T ss_pred cCchHHHHHHHHHhcCCCcccCCCHHHHhCC
Confidence 1111189999999999999999999999988
|
|
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=7.2e-32 Score=255.44 Aligned_cols=131 Identities=16% Similarity=0.195 Sum_probs=115.2
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCC-----C---Cceeeeeeeeee---
Q 011519 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-----N---RRLANLLGCCCE--- 124 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h---pniv~l~~~~~~--- 124 (484)
.+|.++++||=|-|++||+++ ..+.+.||+|+.+... .-.+..+.||.+|++++ | .+||+|++.|..
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq-hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGp 156 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ-HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGP 156 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh-HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCC
Confidence 478999999999999999999 6678899999997533 22456789999999984 3 369999999975
Q ss_pred -CCceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceee
Q 011519 125 -GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF 189 (484)
Q Consensus 125 -~~~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill 189 (484)
+.+++||+|++ |.+|..+|....-+.++...+..|++||+.||.|||++.||||.||||+|||+
T Consensus 157 NG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl 221 (590)
T KOG1290|consen 157 NGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLL 221 (590)
T ss_pred CCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeee
Confidence 45799999999 77999999877778899999999999999999999999999999999999999
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.1e-33 Score=267.28 Aligned_cols=198 Identities=15% Similarity=0.171 Sum_probs=174.0
Q ss_pred hcCCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCc--------cHHHHHHHHHHHhcCC---CCceeeeee
Q 011519 53 TSGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--------DARQFLEEARAVGQLR---NRRLANLLG 120 (484)
Q Consensus 53 ~~~f~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~---hpniv~l~~ 120 (484)
..+|++|..++.+|.|+||.|++|+ .++...|+||.|.+...- +....-.|+.+|..++ |+||+++++
T Consensus 557 ~~k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLd 636 (772)
T KOG1152|consen 557 YKKFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLD 636 (772)
T ss_pred ecccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhh
Confidence 4578899999999999999999999 456778999998664321 1223567999999997 999999999
Q ss_pred eeeeCCceEEEEecC-CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeec
Q 011519 121 CCCEGDERLLVAEYM-PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSC 199 (484)
Q Consensus 121 ~~~~~~~~~lv~Ey~-~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~D 199 (484)
+|.+++.+||+||-. +|-+|+++|. .+..+++.++..|+.||+.|+++||+. ||||||||-+||+++.+|-+||+|
T Consensus 637 fFEddd~yyl~te~hg~gIDLFd~IE--~kp~m~E~eAk~IFkQV~agi~hlh~~-~ivhrdikdenvivd~~g~~klid 713 (772)
T KOG1152|consen 637 FFEDDDYYYLETEVHGEGIDLFDFIE--FKPRMDEPEAKLIFKQVVAGIKHLHDQ-GIVHRDIKDENVIVDSNGFVKLID 713 (772)
T ss_pred eeecCCeeEEEecCCCCCcchhhhhh--ccCccchHHHHHHHHHHHhcccccccc-CceecccccccEEEecCCeEEEee
Confidence 999999999999985 5679999996 556799999999999999999999999 999999999999999999999999
Q ss_pred cCCccccCCC--CcccCCCCCCCcccccCCCC-CCCCceeehHHHHHHHhhCCCCCC
Q 011519 200 FGLMKNSRDG--RSYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPP 253 (484)
Q Consensus 200 fG~a~~~~~~--~~~~~t~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~tg~~p~~ 253 (484)
||.+.....+ ..+.||..|.|||++.|..| ...-|||++|++||.++....|++
T Consensus 714 fgsaa~~ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 714 FGSAAYTKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred ccchhhhcCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 9998876655 57899999999999999886 557899999999999999988865
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.2e-31 Score=239.70 Aligned_cols=207 Identities=26% Similarity=0.383 Sum_probs=183.9
Q ss_pred CCCCCCceEEEEEeC-CCcEEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCCCCCHHh
Q 011519 65 HGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAK 142 (484)
Q Consensus 65 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~~gsL~~ 142 (484)
||.|++|.||++... +++.++||++...... ....+.+|+..++.++|++|+++++++......+++|||+++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 589999999999964 4889999999865532 24679999999999999999999999999999999999999999999
Q ss_pred hhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecC-CCCceeeccCCccccCCC----CcccCCCC
Q 011519 143 HLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-DVNPRLSCFGLMKNSRDG----RSYSTNLA 217 (484)
Q Consensus 143 ~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~-~~~~kl~DfG~a~~~~~~----~~~~~t~~ 217 (484)
++.... ..+++..+..++.+++.+|.+||+. |++|+||+|.||+++. ++.++|+|||.+...... ....+...
T Consensus 81 ~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~-~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~ 158 (215)
T cd00180 81 LLKENE-GKLSEDEILRILLQILEGLEYLHSN-GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPA 158 (215)
T ss_pred HHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcccCCCC
Confidence 996321 4689999999999999999999999 9999999999999998 899999999998876543 34556788
Q ss_pred CCCcccccCC-CCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHHhccC
Q 011519 218 FTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYE 296 (484)
Q Consensus 218 y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 296 (484)
|++||.+... ..+.++|+|++|+++++| ..+.+++..|+..|
T Consensus 159 ~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------------~~~~~~l~~~l~~~ 201 (215)
T cd00180 159 YMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------------PELKDLIRKMLQKD 201 (215)
T ss_pred ccChhHhcccCCCCchhhhHHHHHHHHHH-------------------------------------HHHHHHHHHHhhCC
Confidence 9999999877 788999999999999999 57899999999999
Q ss_pred CCCCCChHHHHHHH
Q 011519 297 PRERPNPRSLVTAL 310 (484)
Q Consensus 297 p~~Rps~~~il~~l 310 (484)
|++||++.++++++
T Consensus 202 p~~R~~~~~l~~~~ 215 (215)
T cd00180 202 PEKRPSAKEILEHL 215 (215)
T ss_pred cccCcCHHHHhhCC
Confidence 99999999998753
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-32 Score=262.21 Aligned_cols=250 Identities=16% Similarity=0.166 Sum_probs=196.7
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCC------CceeeeeeeeeeCCceEE
Q 011519 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRN------RRLANLLGCCCEGDERLL 130 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h------pniv~l~~~~~~~~~~~l 130 (484)
.|++.+..|+|-|++|..|.. .-|..||||+|..+.. -.+.=+.|+++|.+|.. -|+++++-.|.+.++++|
T Consensus 433 RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~-M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLCl 511 (752)
T KOG0670|consen 433 RYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV-MHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLCL 511 (752)
T ss_pred eeEEEeccccceeeeeeeccccCCCCeeEEEEeecchH-HhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeEE
Confidence 578888899999999999994 4577999999986542 23456789999999952 489999999999999999
Q ss_pred EEecCCCCCHHhhhccCC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCC-CCceeeccCCccccCC
Q 011519 131 VAEYMPNDTLAKHLFHWE-TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD-VNPRLSCFGLMKNSRD 208 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~-~~~kl~DfG~a~~~~~ 208 (484)
|||-+ ..+|.++|+... +-.|....+..++.|+.-||..|... ||+|.||||.|||+++. ..+||||||.|.....
T Consensus 512 VFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c-~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~e 589 (752)
T KOG0670|consen 512 VFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKC-GVLHADIKPDNILVNESKNILKLCDFGSASFASE 589 (752)
T ss_pred Eehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhc-CeeecccCccceEeccCcceeeeccCcccccccc
Confidence 99998 448999997532 34578889999999999999999998 99999999999999954 5689999999987665
Q ss_pred C--CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHh----------------h---------
Q 011519 209 G--RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLI----------------R--------- 261 (484)
Q Consensus 209 ~--~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~----------------~--------- 261 (484)
. +-+..+..|.|||.+.|.+|+...|+||.||+||||.||+..|++...+.. .
T Consensus 590 neitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHF 669 (752)
T KOG0670|consen 590 NEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHF 669 (752)
T ss_pred ccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhc
Confidence 4 334556789999999999999999999999999999999998886421100 0
Q ss_pred ---------------hcccccccccc---------cc--CCCC---hHHHHHHHHHHHHHhccCCCCCCChHHHHHHH
Q 011519 262 ---------------DRNIQTLTDSC---------LE--GQFS---SDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 262 ---------------~~~~~~~~~~~---------~~--~~~~---~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 310 (484)
+.....++... +. ..++ ......+.+|+..||..||++|.|..+.|.|.
T Consensus 670 D~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~Hp 747 (752)
T KOG0670|consen 670 DQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKHP 747 (752)
T ss_pred ccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcCC
Confidence 00000000000 00 0122 22456789999999999999999999999873
|
|
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.2e-32 Score=243.33 Aligned_cols=245 Identities=18% Similarity=0.219 Sum_probs=190.7
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEecCC--CCccHHHHHHHHHHHhcCCCCceeeeeeeeeeC------Cce
Q 011519 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRS--AWPDARQFLEEARAVGQLRNRRLANLLGCCCEG------DER 128 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~------~~~ 128 (484)
+|.-+..+|.|.- .|-.+. .-.+++||+|++... .....++..+|..++..+.|+||++++.+|.-. ...
T Consensus 18 Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~ 96 (369)
T KOG0665|consen 18 RYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEV 96 (369)
T ss_pred eeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhH
Confidence 4444566788877 555555 446889999998654 233467889999999999999999999998643 357
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC
Q 011519 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 208 (484)
Q Consensus 129 ~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~ 208 (484)
|+|||||.. +|...+. ..++-.++..|+.|++.|+.|||+. ||+||||||+||++..++.+||.|||+++....
T Consensus 97 y~v~e~m~~-nl~~vi~----~elDH~tis~i~yq~~~~ik~lhs~-~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~ 170 (369)
T KOG0665|consen 97 YLVMELMDA-NLCQVIL----MELDHETISYILYQMLCGIKHLHSA-GIIHRDLKPSNIVVNSDCTLKILDFGLARTEDT 170 (369)
T ss_pred HHHHHhhhh-HHHHHHH----HhcchHHHHHHHHHHHHHHHHHHhc-ceeecccCcccceecchhheeeccchhhcccCc
Confidence 999999955 8998885 3467788999999999999999999 999999999999999999999999999987655
Q ss_pred C---CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhh-HHh------------------------
Q 011519 209 G---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL-DLI------------------------ 260 (484)
Q Consensus 209 ~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~-~~~------------------------ 260 (484)
. +.+..|..|.|||++.+-.+.+..||||+||++.||++|+..|++... +.+
T Consensus 171 ~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~ 250 (369)
T KOG0665|consen 171 DFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRN 250 (369)
T ss_pred ccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHH
Confidence 4 456778899999999988899999999999999999999987764310 000
Q ss_pred --hh------cccccc-ccccccC--CCChHHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 261 --RD------RNIQTL-TDSCLEG--QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 261 --~~------~~~~~~-~~~~~~~--~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
.. ...... ++..... +.+...+..+.+++.+||..||++|.|++++|.|
T Consensus 251 yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H 310 (369)
T KOG0665|consen 251 YVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH 310 (369)
T ss_pred HhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence 00 000000 1111110 1112345678999999999999999999999998
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=7e-31 Score=231.59 Aligned_cols=246 Identities=19% Similarity=0.208 Sum_probs=187.3
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCccHHHHHHHHHHHhcC-CCCceeeeeee-eeeCCceEEEEec
Q 011519 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGC-CCEGDERLLVAEY 134 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~-~~~~~~~~lv~Ey 134 (484)
.|+|.+.+|+|.||.+.++.+ .+.+.+++|.+.... ...++|.+|..---.| .|.||+.-+++ |+..+.+++++||
T Consensus 25 ~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~-tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~ 103 (378)
T KOG1345|consen 25 VYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ-TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEF 103 (378)
T ss_pred hhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch-hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeecc
Confidence 678889999999999999995 567889999987653 4577899999876666 48999987765 6777888999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeec--CCCCceeeccCCccccCCCC-c
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD--DDVNPRLSCFGLMKNSRDGR-S 211 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~--~~~~~kl~DfG~a~~~~~~~-~ 211 (484)
++-|+|.+-+. ...+.+....+++.|+++||.|+|++ ++||||||.+||||- +..+|||||||+.+..+..- .
T Consensus 104 aP~gdL~snv~---~~GigE~~~K~v~~ql~SAi~fMHsk-nlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV~~ 179 (378)
T KOG1345|consen 104 APRGDLRSNVE---AAGIGEANTKKVFAQLLSAIEFMHSK-NLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTVKY 179 (378)
T ss_pred CccchhhhhcC---cccccHHHHHHHHHHHHHHHHHhhcc-chhhcccccceEEEecCCccEEEeeecccccccCceehh
Confidence 99999999884 34588889999999999999999999 999999999999994 34579999999987765542 2
Q ss_pred ccCCCCCCCcccccCC-----CCCCCCceeehHHHHHHHhhCCCCCCchhhHHh---hhccccccccccccCCCChHHHH
Q 011519 212 YSTNLAFTPPEYLRTG-----RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLI---RDRNIQTLTDSCLEGQFSSDEGT 283 (484)
Q Consensus 212 ~~~t~~y~aPE~~~~~-----~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 283 (484)
...+..|.+||..... ...+.+|||.||++++.++||..|+.....+.- .-.....-....++..| ...++
T Consensus 180 ~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~~F-~~fs~ 258 (378)
T KOG1345|consen 180 LEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALPKKF-NPFSE 258 (378)
T ss_pred hhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCchhh-cccCH
Confidence 3346789999987532 267899999999999999999987653221110 00001111111111111 33467
Q ss_pred HHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 284 ELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 284 ~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
.+..+.++-|..+|++|.-..++...
T Consensus 259 ~a~r~Fkk~lt~~~~drcki~~~kk~ 284 (378)
T KOG1345|consen 259 KALRLFKKSLTPRFKDRCKIWTAKKM 284 (378)
T ss_pred HHHHHHHHhcCCcccccchhHHHHHH
Confidence 78899999999999999665555544
|
|
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.8e-31 Score=242.04 Aligned_cols=250 Identities=19% Similarity=0.223 Sum_probs=196.8
Q ss_pred cccccCCCCCCceEEEEEeCC------CcEEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCceeeeeeeeeeC-CceEEE
Q 011519 60 NIVSEHGEKAPNVVYKGKLEN------QFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEG-DERLLV 131 (484)
Q Consensus 60 ~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-~~~~lv 131 (484)
++...+-+|.||.||.|.+++ .+.|-||.++....+ ....++.|.-++..+.|||+..+.+++.+. ..++.+
T Consensus 287 ~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P~V~ 366 (563)
T KOG1024|consen 287 RLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATPFVL 366 (563)
T ss_pred echhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcceEE
Confidence 334456899999999997533 456778888755432 255689999999999999999999998654 568999
Q ss_pred EecCCCCCHHhhhccC------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccc
Q 011519 132 AEYMPNDTLAKHLFHW------ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN 205 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~------~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 205 (484)
+.++.-|+|..||... ..+.++..+...++.|++.|+.|||+. |+||.||...|.+|++..+|||+|-.+++.
T Consensus 367 y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~-~ViHkDiAaRNCvIdd~LqVkltDsaLSRD 445 (563)
T KOG1024|consen 367 YPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH-GVIHKDIAARNCVIDDQLQVKLTDSALSRD 445 (563)
T ss_pred EeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc-CcccchhhhhcceehhheeEEeccchhccc
Confidence 9999999999999721 234577888999999999999999998 999999999999999999999999999887
Q ss_pred cCCCC------cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCCh
Q 011519 206 SRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSS 279 (484)
Q Consensus 206 ~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (484)
..+.. .......||+||.+....|+.++|||||||+||||+|-..-|..+..+.. +........+-..|-
T Consensus 446 LFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfE----m~~ylkdGyRlaQP~ 521 (563)
T KOG1024|consen 446 LFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFE----MEHYLKDGYRLAQPF 521 (563)
T ss_pred cCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHH----HHHHHhccceecCCC
Confidence 55432 22234679999999999999999999999999999995443333322211 111222222333466
Q ss_pred HHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhh
Q 011519 280 DEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQ 314 (484)
Q Consensus 280 ~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~ 314 (484)
.+++++..++..||...|++||++++++.-|....
T Consensus 522 NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~ 556 (563)
T KOG1024|consen 522 NCPDELFTVMACCWALLPEERPSFSQLVICLSEFH 556 (563)
T ss_pred CCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHH
Confidence 78899999999999999999999999998887654
|
|
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=244.07 Aligned_cols=245 Identities=22% Similarity=0.273 Sum_probs=192.7
Q ss_pred CcccccccCCCCCCceEEEEEe-C---CCcEEEEEEecCCCCccHHHHHHHHHHHhcCC-CCceeeeeeeeeeCCceEEE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-E---NQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLV 131 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~lv 131 (484)
..|.++.++|.|+|++||+++. . .++.||+|.+...+ ...+...|+++|..+. +.||+++.+++..++...+|
T Consensus 36 ~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts--~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~iv 113 (418)
T KOG1167|consen 36 NAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS--SPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIV 113 (418)
T ss_pred hhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc--CchHHHHHHHHHHHhccchhhhcchhhhccCCeeEEE
Confidence 3567778889999999999993 3 46889999997654 4456899999999995 99999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeec-CCCCceeeccCCcccc----
Q 011519 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD-DDVNPRLSCFGLMKNS---- 206 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~-~~~~~kl~DfG~a~~~---- 206 (484)
+||++.-+..+++. .++..++..+++.++.||.++|.+ |||||||||+|+|.+ ..+.-.|.|||++...
T Consensus 114 lp~~~H~~f~~l~~-----~l~~~~i~~Yl~~ll~Al~~~h~~-GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~ 187 (418)
T KOG1167|consen 114 LPYFEHDRFRDLYR-----SLSLAEIRWYLRNLLKALAHLHKN-GIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQ 187 (418)
T ss_pred ecccCccCHHHHHh-----cCCHHHHHHHHHHHHHHhhhhhcc-CccccCCCccccccccccCCceEEechhHHHHHhhh
Confidence 99999999888884 377889999999999999999999 999999999999998 4567899999997610
Q ss_pred -------------CC--C-----------------------------CcccCCCCCCCcccccCCC-CCCCCceeehHHH
Q 011519 207 -------------RD--G-----------------------------RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTL 241 (484)
Q Consensus 207 -------------~~--~-----------------------------~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~~ 241 (484)
.. + ....||++|.|||++.... -++++||||.||+
T Consensus 188 ~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI 267 (418)
T KOG1167|consen 188 QTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVI 267 (418)
T ss_pred hhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeeccce
Confidence 00 0 0235789999999998754 7889999999999
Q ss_pred HHHHhhCCCCCCchhhHHh--------------------hhc-----------------ccccc-cccccc--------C
Q 011519 242 LLDLLSGKHIPPSHALDLI--------------------RDR-----------------NIQTL-TDSCLE--------G 275 (484)
Q Consensus 242 l~el~tg~~p~~~~~~~~~--------------------~~~-----------------~~~~~-~~~~~~--------~ 275 (484)
++.+++++.||.....+.. .+. .+..+ ...+.. .
T Consensus 268 ~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~ 347 (418)
T KOG1167|consen 268 LLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTERE 347 (418)
T ss_pred eehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceeec
Confidence 9999999999864311100 000 00001 011111 0
Q ss_pred CCChHHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 276 QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 276 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
......+..+.+|+.+|+..||.+|.|+++.|.|
T Consensus 348 ~~~d~~~~~~~dlLdk~le~np~kRitAEeALkH 381 (418)
T KOG1167|consen 348 IGSDVFPALLLDLLDKCLELNPQKRITAEDALKH 381 (418)
T ss_pred cccccccHHHHHHHHHHccCChhhcccHHHHhcC
Confidence 1112235589999999999999999999999988
|
|
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-29 Score=234.03 Aligned_cols=193 Identities=23% Similarity=0.260 Sum_probs=170.0
Q ss_pred cccccCCCCCCceEEEEEeC-CCcEEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCCC
Q 011519 60 NIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPN 137 (484)
Q Consensus 60 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~~ 137 (484)
.+...||.|++|.||++... ++..+++|.+...... ..+.+.+|++.+++++|+|++++++++......++++||+++
T Consensus 2 ~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~ 81 (225)
T smart00221 2 ELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCEG 81 (225)
T ss_pred ceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccCC
Confidence 45567899999999999965 4889999999876544 567899999999999999999999999998999999999999
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-----Ccc
Q 011519 138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----RSY 212 (484)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~-----~~~ 212 (484)
++|.+++..... .+++..+..++.+++.+|.+||+. +++|+||+|.||+++.++.++|+|||++...... ...
T Consensus 82 ~~L~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~-~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~~~ 159 (225)
T smart00221 82 GDLFDYLRKKGG-KLSEEEARFYLRQILEALEYLHSL-GIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLKTV 159 (225)
T ss_pred CCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccccccce
Confidence 999999964221 289999999999999999999998 9999999999999999999999999998876554 345
Q ss_pred cCCCCCCCcccc-cCCCCCCCCceeehHHHHHHHhhCCCCCCc
Q 011519 213 STNLAFTPPEYL-RTGRVTPESVMYSFGTLLLDLLSGKHIPPS 254 (484)
Q Consensus 213 ~~t~~y~aPE~~-~~~~~~~~~Dv~slG~~l~el~tg~~p~~~ 254 (484)
.++..|++||.+ ....++.++|+||||+++++|++|+.||..
T Consensus 160 ~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 160 KGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred eccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 677889999998 556678899999999999999999998865
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-29 Score=273.93 Aligned_cols=193 Identities=17% Similarity=0.153 Sum_probs=142.5
Q ss_pred cCCC-Cceeeeeeee-------eeCCceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccc
Q 011519 109 QLRN-RRLANLLGCC-------CEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180 (484)
Q Consensus 109 ~l~h-pniv~l~~~~-------~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~ 180 (484)
.++| +||++++++| .+...++++|||+ +++|.++|.. ....+++.+++.++.||+.||.|||++ |||||
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~-gIvHr 104 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDN-PDRSVDAFECFHVFRQIVEIVNAAHSQ-GIVVH 104 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhc-ccccccHHHHHHHHHHHHHHHHHHHhC-Ceeec
Confidence 3455 5888888877 2334577888988 5699999964 345699999999999999999999998 99999
Q ss_pred cccccceeecC-------------------CCCceeeccCCccccCC--------------------CCcccCCCCCCCc
Q 011519 181 DLNAYRIVFDD-------------------DVNPRLSCFGLMKNSRD--------------------GRSYSTNLAFTPP 221 (484)
Q Consensus 181 Dlkp~Nill~~-------------------~~~~kl~DfG~a~~~~~--------------------~~~~~~t~~y~aP 221 (484)
||||+||||+. ++.+||+|||+++.... .....||+.||||
T Consensus 105 DlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 184 (793)
T PLN00181 105 NVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSP 184 (793)
T ss_pred cCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceECh
Confidence 99999999954 45677777877764211 0113468889999
Q ss_pred ccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHHhccCCCCCC
Q 011519 222 EYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 301 (484)
Q Consensus 222 E~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 301 (484)
|++.+..++.++|||||||+||||++|..|+..... ..... .....++ .. ....+....++.+||..+|.+||
T Consensus 185 E~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~-~~~~~-~~~~~~~----~~-~~~~~~~~~~~~~~L~~~P~~Rp 257 (793)
T PLN00181 185 EEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR-TMSSL-RHRVLPP----QI-LLNWPKEASFCLWLLHPEPSCRP 257 (793)
T ss_pred hhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH-HHHHH-HHhhcCh----hh-hhcCHHHHHHHHHhCCCChhhCc
Confidence 999998999999999999999999998866542211 11000 0011111 11 11234567889999999999999
Q ss_pred ChHHHHHHHH
Q 011519 302 NPRSLVTALV 311 (484)
Q Consensus 302 s~~~il~~l~ 311 (484)
|+.+++++.+
T Consensus 258 s~~eil~h~~ 267 (793)
T PLN00181 258 SMSELLQSEF 267 (793)
T ss_pred ChHHHhhchh
Confidence 9999998854
|
|
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.8e-28 Score=216.24 Aligned_cols=167 Identities=16% Similarity=0.109 Sum_probs=128.5
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCCcccCCCC
Q 011519 138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA 217 (484)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~t~~ 217 (484)
|||.+++.. .+..+++.+++.|+.||+.||.|||+. + ||+|||++.++.+|+ ||++....... ..||+.
T Consensus 1 GsL~~~l~~-~~~~l~~~~~~~i~~qi~~~L~~lH~~-~------kp~Nil~~~~~~~~~--fG~~~~~~~~~-~~g~~~ 69 (176)
T smart00750 1 VSLADILEV-RGRPLNEEEIWAVCLQCLRALRELHRQ-A------KSGNILLTWDGLLKL--DGSVAFKTPEQ-SRVDPY 69 (176)
T ss_pred CcHHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHhc-C------CcccEeEcCccceee--ccceEeecccc-CCCccc
Confidence 689999964 345699999999999999999999998 6 999999999999999 99988765433 367899
Q ss_pred CCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhH-Hhhhcccccccccccc-CCCChHHHH--HHHHHHHHHh
Q 011519 218 FTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALD-LIRDRNIQTLTDSCLE-GQFSSDEGT--ELVRLASRCL 293 (484)
Q Consensus 218 y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~--~l~~li~~cl 293 (484)
|+|||++.+..++.++|||||||++|||+||+.||...... ................ ...+...+. .+.+++.+||
T Consensus 70 y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl 149 (176)
T smart00750 70 FMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFMRVCA 149 (176)
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHHHHH
Confidence 99999999999999999999999999999999887533110 0000001111111000 011223333 6999999999
Q ss_pred ccCCCCCCChHHHHHHHHhhhc
Q 011519 294 QYEPRERPNPRSLVTALVTLQK 315 (484)
Q Consensus 294 ~~dp~~Rps~~~il~~l~~~~~ 315 (484)
..+|.+|||+.+++.++..+..
T Consensus 150 ~~~p~~Rp~~~~ll~~~~~~~~ 171 (176)
T smart00750 150 SRLPQRREAANHYLAHCRALFA 171 (176)
T ss_pred hcccccccCHHHHHHHHHHHHH
Confidence 9999999999999999877643
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.8e-29 Score=220.73 Aligned_cols=254 Identities=20% Similarity=0.293 Sum_probs=204.4
Q ss_pred CCCcccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCc--cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEE
Q 011519 55 GFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (484)
Q Consensus 55 ~f~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 132 (484)
+++..+++-+|.+...|..|+|++..+ .+++|+++..... ..++|..|.-.|+.+.||||..++|.|..+.++.++.
T Consensus 188 d~~~lnl~tkl~e~hsgelwrgrwqgn-divakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~is 266 (448)
T KOG0195|consen 188 DVSSLNLITKLAESHSGELWRGRWQGN-DIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIIS 266 (448)
T ss_pred chhhhhhhhhhccCCCcccccccccCc-chhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEee
Confidence 355667778888889999999998655 5777888655433 3567999999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccc-cccccceeecCCCCceeeccCCccccCCCCc
Q 011519 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS 211 (484)
Q Consensus 133 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~-Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 211 (484)
.||+-|||...|+...+-..+..++.+++.+|++|+.|||+...++-| -|.+..++||++.+.+|+ .+-.+.......
T Consensus 267 q~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltaris-mad~kfsfqe~g 345 (448)
T KOG0195|consen 267 QYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARIS-MADTKFSFQEVG 345 (448)
T ss_pred eeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhhee-cccceeeeeccc
Confidence 999999999999865555678889999999999999999998778877 899999999999998876 233333333333
Q ss_pred ccCCCCCCCcccccCCCC---CCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHH
Q 011519 212 YSTNLAFTPPEYLRTGRV---TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288 (484)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~---~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 288 (484)
..-.|.||+||.++..+- -.++|+|||.+++|||.|...||......... ..+.-..++..+|+..+..+.+|
T Consensus 346 r~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecg----mkialeglrv~ippgis~hm~kl 421 (448)
T KOG0195|consen 346 RAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECG----MKIALEGLRVHIPPGISRHMNKL 421 (448)
T ss_pred cccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhh----hhhhhccccccCCCCccHHHHHH
Confidence 445689999999987653 34789999999999999999988654322211 11222334456788889999999
Q ss_pred HHHHhccCCCCCCChHHHHHHHHhhh
Q 011519 289 ASRCLQYEPRERPNPRSLVTALVTLQ 314 (484)
Q Consensus 289 i~~cl~~dp~~Rps~~~il~~l~~~~ 314 (484)
+.-|+..||.+||.+..|+-.|+.+.
T Consensus 422 m~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 422 MNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred HHHHhcCCCCcCCCcceehhhHHHhc
Confidence 99999999999999999999998764
|
|
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.7e-26 Score=222.96 Aligned_cols=257 Identities=16% Similarity=0.134 Sum_probs=198.1
Q ss_pred cccccccCCCCCCceEEEEEeCC--CcEEEEEEecCCCCccHHHHHHHHHHHhcCCC----Cceeeeeeee-eeCCceEE
Q 011519 58 MENIVSEHGEKAPNVVYKGKLEN--QFRIAVKRFNRSAWPDARQFLEEARAVGQLRN----RRLANLLGCC-CEGDERLL 130 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~~~--~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----pniv~l~~~~-~~~~~~~l 130 (484)
.|.+.+.||+|+||.||+|.... ...+|+|............+..|+.++..+.. +++..+++.+ ......||
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 78899999999999999999544 35799998876543333367889999988863 6899999998 47778899
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCC-----CCceeeccCCccc
Q 011519 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD-----VNPRLSCFGLMKN 205 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~-----~~~kl~DfG~a~~ 205 (484)
||+.+ |.+|.++......+.++..++..|+.|++.+|.+||+. |+|||||||+|++++.. ..+.|.|||+++.
T Consensus 99 VM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~-G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~ 176 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSK-GFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARR 176 (322)
T ss_pred EEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhc-CcccCCcCHHHeeecCCCCcccceEEEEecCCCcc
Confidence 99999 88999988655567899999999999999999999999 99999999999999854 4699999999982
Q ss_pred cC-----------C---CCcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccc
Q 011519 206 SR-----------D---GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDS 271 (484)
Q Consensus 206 ~~-----------~---~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 271 (484)
.. . .....||..|+++....+...+++.|+||++.++.+++.|..|+........ ..........
T Consensus 177 ~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~-~~~~~~~~~~ 255 (322)
T KOG1164|consen 177 FKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDL-KSKFEKDPRK 255 (322)
T ss_pred ccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccch-HHHHHHHhhh
Confidence 11 1 1124489999999999999999999999999999999999977543221100 0111111111
Q ss_pred cccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhcCC
Q 011519 272 CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (484)
Q Consensus 272 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 317 (484)
..........+..+.++...+-..+...+|....+...|.......
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~~ 301 (322)
T KOG1164|consen 256 LLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDSE 301 (322)
T ss_pred hccccccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHhc
Confidence 1111122334567888888888899999999999999987765543
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.7e-26 Score=219.93 Aligned_cols=166 Identities=16% Similarity=0.043 Sum_probs=128.2
Q ss_pred CcccccccCCCCCCceEEEEEeC--CCcEEEEEEecCCC-----CccHHHHHHHHHHHhcCCCCceee-eeeeeeeCCce
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLE--NQFRIAVKRFNRSA-----WPDARQFLEEARAVGQLRNRRLAN-LLGCCCEGDER 128 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~--~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~hpniv~-l~~~~~~~~~~ 128 (484)
..|.+.+.||+|+||+||+|... +++.||||++.... ....+.|.+|+++|++++|+||+. ++++ +..
T Consensus 18 ~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~----~~~ 93 (365)
T PRK09188 18 ARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT----GKD 93 (365)
T ss_pred CCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc----CCc
Confidence 35677788899999999999853 57778999875331 112456899999999999999985 4432 457
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccc-cccceeecCCCCceeeccCCccccC
Q 011519 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDL-NAYRIVFDDDVNPRLSCFGLMKNSR 207 (484)
Q Consensus 129 ~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dl-kp~Nill~~~~~~kl~DfG~a~~~~ 207 (484)
+|||||++|++|... . .. . ...++.|++.||.|||+. ||+|||| ||+|||++.++.+||+|||+++...
T Consensus 94 ~LVmE~~~G~~L~~~-~--~~---~---~~~~~~~i~~aL~~lH~~-gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~ 163 (365)
T PRK09188 94 GLVRGWTEGVPLHLA-R--PH---G---DPAWFRSAHRALRDLHRA-GITHNDLAKPQNWLMGPDGEAAVIDFQLASVFR 163 (365)
T ss_pred EEEEEccCCCCHHHh-C--cc---c---hHHHHHHHHHHHHHHHHC-CCeeCCCCCcceEEEcCCCCEEEEECccceecc
Confidence 999999999999732 1 11 1 146789999999999998 9999999 9999999999999999999998654
Q ss_pred CC------------CcccCCCCCCCcccccCCC------CCCCCcee
Q 011519 208 DG------------RSYSTNLAFTPPEYLRTGR------VTPESVMY 236 (484)
Q Consensus 208 ~~------------~~~~~t~~y~aPE~~~~~~------~~~~~Dv~ 236 (484)
.. ....+++.|+|||.+.... .+..+|-|
T Consensus 164 ~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~dgW 210 (365)
T PRK09188 164 RRGALYRIAAYEDLRHLLKHKRTYAPDALTPRERKILARKSLPSRIW 210 (365)
T ss_pred cCcchhhhhhhhhhhhhhccCccCCcccCChhhhccccccccccCcE
Confidence 32 1334678899999986432 34456766
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.7e-26 Score=198.58 Aligned_cols=255 Identities=16% Similarity=0.155 Sum_probs=201.5
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCC-CceeeeeeeeeeCCceEEEEec
Q 011519 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRN-RRLANLLGCCCEGDERLLVAEY 134 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-pniv~l~~~~~~~~~~~lv~Ey 134 (484)
..|.++++||.|+||.+|.|. ..+|..||||+-+... ...++.-|..+.+.|++ ..|..+..++.+...-.+||++
T Consensus 15 gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a--~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdL 92 (341)
T KOG1163|consen 15 GKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA--KHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDL 92 (341)
T ss_pred cceEEEEeecCCchhheeeeeeccCCceEEEEeecccC--CCcchhHHHHHHHHhccCCCCchhhhhccccccceeeeec
Confidence 468999999999999999999 7789999999976543 23467889999999974 7888899999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecC---CCCceeeccCCccccCC---
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD---DVNPRLSCFGLMKNSRD--- 208 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~---~~~~kl~DfG~a~~~~~--- 208 (484)
. |.||.+++.- ..+.++..+++-++-|++.-++|+|.+ +.|||||||+|+|.+- ...+.|+|||+++...+
T Consensus 93 L-GPsLEdLfnf-C~R~ftmkTvLMLaDQml~RiEyvH~r-~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t 169 (341)
T KOG1163|consen 93 L-GPSLEDLFNF-CSRRFTMKTVLMLADQMLSRIEYVHLR-NFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRT 169 (341)
T ss_pred c-CccHHHHHHH-HhhhhhHHhHHHHHHHHHHHHHHHHhh-ccccccCCccceeeccccccceEEEEeccchhhhccccc
Confidence 9 8899998753 456799999999999999999999999 9999999999999973 45689999999986543
Q ss_pred --------CCcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcccccccc---ccccCCC
Q 011519 209 --------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTD---SCLEGQF 277 (484)
Q Consensus 209 --------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~ 277 (484)
.....||..|.+-....+...+.+.|+-|+|.+|..+..|..|+.+.....- .+..+.+.. .......
T Consensus 170 ~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk-~QKyEkI~EkK~s~~ie~L 248 (341)
T KOG1163|consen 170 RQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATK-KQKYEKISEKKMSTPIEVL 248 (341)
T ss_pred cccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhH-HHHHHHHHHhhcCCCHHHH
Confidence 2456788999998888777789999999999999999999988765322111 111111111 1111122
Q ss_pred ChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhcCC
Q 011519 278 SSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (484)
Q Consensus 278 ~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 317 (484)
....|.++.-.+..|-..--++-|...-+.+.++.+....
T Consensus 249 C~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr~l 288 (341)
T KOG1163|consen 249 CKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFRTL 288 (341)
T ss_pred hCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHhhc
Confidence 3455678999999999999999999877777766655443
|
|
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.9e-25 Score=202.80 Aligned_cols=252 Identities=17% Similarity=0.184 Sum_probs=200.9
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCccHHHHHHHHHHHhcC-CCCceeeeeeeeeeCCceEEEEecC
Q 011519 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~Ey~ 135 (484)
.|++.++||.|+||+++.|+ +-++++||||.-...+ +..++..|....+.| ..++|..++-+..++.+-.||+|++
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL 106 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL 106 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh
Confidence 46788999999999999999 7789999999975543 455677888888888 5799999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCC-----CCceeeccCCccccCC--
Q 011519 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD-----VNPRLSCFGLMKNSRD-- 208 (484)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~-----~~~kl~DfG~a~~~~~-- 208 (484)
|-||.+++ ++.++.|+..++..++.|++.-++|+|++ .+|+|||||+|+||+.- ..+.|+|||+|+...+
T Consensus 107 -GPSLEDLF-D~CgR~FSvKTV~miA~Qmi~rie~vH~k-~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~ 183 (449)
T KOG1165|consen 107 -GPSLEDLF-DLCGRRFSVKTVAMIAKQMITRIEYVHEK-DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPK 183 (449)
T ss_pred -CcCHHHHH-HHhcCcccHHhHHHHHHHHHHHHHHHHhc-ceeecccCccceeecCCCCCCCceEEEEeccchhhhcCcc
Confidence 88999977 56788899999999999999999999999 99999999999999743 3589999999987543
Q ss_pred ---------CCcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhc--cccccccccccCCC
Q 011519 209 ---------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR--NIQTLTDSCLEGQF 277 (484)
Q Consensus 209 ---------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~ 277 (484)
..+..||-.||+-....|..-+.+.|+-|||-+....+.|..|+.+...+..+.. .+-+-.........
T Consensus 184 TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr~T~i~~L 263 (449)
T KOG1165|consen 184 TKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKRSTPIEVL 263 (449)
T ss_pred ccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccccccCCHHHH
Confidence 2467899999999999999999999999999999999999998765432222111 00000000000112
Q ss_pred ChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhh
Q 011519 278 SSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQ 314 (484)
Q Consensus 278 ~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~ 314 (484)
....+.++...+...-..+-.+-|..+-+...+..+.
T Consensus 264 c~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvl 300 (449)
T KOG1165|consen 264 CEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVL 300 (449)
T ss_pred HhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHH
Confidence 2345778999999999999999999877666655544
|
|
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.9e-24 Score=206.63 Aligned_cols=247 Identities=22% Similarity=0.259 Sum_probs=194.3
Q ss_pred ccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCcc---HHHHHHHHHHHhcCCCC-ceeeeeeeeeeCCceEEEEec
Q 011519 59 ENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD---ARQFLEEARAVGQLRNR-RLANLLGCCCEGDERLLVAEY 134 (484)
Q Consensus 59 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~hp-niv~l~~~~~~~~~~~lv~Ey 134 (484)
|.++..||.|+||.||++... ..+++|.+....... ...+.+|+.++..+.|+ +|+++.+.+......+++++|
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 566778899999999999976 689999997654332 66799999999999988 799999999777778999999
Q ss_pred CCCCCHHhhhccCCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCC-CceeeccCCccccCC----
Q 011519 135 MPNDTLAKHLFHWET-QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV-NPRLSCFGLMKNSRD---- 208 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~-~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~-~~kl~DfG~a~~~~~---- 208 (484)
+.+++|.+++..... ..++......+..|++.++.|+|+. +++|||+||+||+++..+ .++++|||+++....
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~-~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~ 158 (384)
T COG0515 80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK-GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGST 158 (384)
T ss_pred CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCcc
Confidence 999999977753211 2689999999999999999999999 999999999999999888 699999999875432
Q ss_pred ------CCcccCCCCCCCcccccC---CCCCCCCceeehHHHHHHHhhCCCCCCchhh----HHhhhccccccccccccC
Q 011519 209 ------GRSYSTNLAFTPPEYLRT---GRVTPESVMYSFGTLLLDLLSGKHIPPSHAL----DLIRDRNIQTLTDSCLEG 275 (484)
Q Consensus 209 ------~~~~~~t~~y~aPE~~~~---~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~----~~~~~~~~~~~~~~~~~~ 275 (484)
.....+|..|++||.+.+ ...+...|+||+|++++++++|..|+..... .......... ..+....
T Consensus 159 ~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 237 (384)
T COG0515 159 SSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILEL-PTPSLAS 237 (384)
T ss_pred ccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhc-CCccccc
Confidence 245678999999999987 5788999999999999999999988654432 1111111111 1000000
Q ss_pred CCC----hHHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 276 QFS----SDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 276 ~~~----~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
... ......+.+++..|+..+|..|.+..+....
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 238 PLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred ccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 111 1223578999999999999999998887765
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.8e-24 Score=191.63 Aligned_cols=140 Identities=16% Similarity=0.160 Sum_probs=109.6
Q ss_pred cccCCCCCCceEEEEEeCCCcEEEEEEecCCCCc--c-------HHH-----------------HHHHHHHHhcCCCCce
Q 011519 62 VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP--D-------ARQ-----------------FLEEARAVGQLRNRRL 115 (484)
Q Consensus 62 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~-------~~~-----------------~~~E~~~l~~l~hpni 115 (484)
.+.||+|+||.||+|...+|+.||||+++..... . ..+ ...|+.++.++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 4678999999999999778999999999754211 1 112 2349999999988776
Q ss_pred eeeeeeeeeCCceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHh-hcCCCcccccccccceeecCCCC
Q 011519 116 ANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYC-TSKERALYHDLNAYRIVFDDDVN 194 (484)
Q Consensus 116 v~l~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~l-H~~~~ivH~Dlkp~Nill~~~~~ 194 (484)
........ ...+|||||++|++|...+. ..+.++...+..++.|++.+|.++ |+. ||+||||||+|||++ ++.
T Consensus 82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~~--~~~~~~~~~~~~i~~qi~~~L~~l~H~~-giiHrDlkP~NIli~-~~~ 155 (190)
T cd05147 82 PCPEPILL--KSHVLVMEFIGDDGWAAPRL--KDAPLSESKARELYLQVIQIMRILYQDC-RLVHADLSEYNLLYH-DGK 155 (190)
T ss_pred CCCcEEEe--cCCEEEEEEeCCCCCcchhh--hcCCCCHHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEEE-CCc
Confidence 44332222 23389999999887765532 345789999999999999999999 687 999999999999998 578
Q ss_pred ceeeccCCccccC
Q 011519 195 PRLSCFGLMKNSR 207 (484)
Q Consensus 195 ~kl~DfG~a~~~~ 207 (484)
++|+|||++....
T Consensus 156 v~LiDFG~a~~~~ 168 (190)
T cd05147 156 LYIIDVSQSVEHD 168 (190)
T ss_pred EEEEEccccccCC
Confidence 9999999987543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.5e-24 Score=192.97 Aligned_cols=168 Identities=11% Similarity=0.038 Sum_probs=131.7
Q ss_pred cccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHH---------HHHHHHHHhcCCCCceeeeeeeeeeC---
Q 011519 58 MENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQ---------FLEEARAVGQLRNRRLANLLGCCCEG--- 125 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~---------~~~E~~~l~~l~hpniv~l~~~~~~~--- 125 (484)
+|++++.+|.|+||.||+... ++..+|||.+........+. +.+|+..+.++.||+|..+.+++...
T Consensus 32 ~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~~~ 110 (232)
T PRK10359 32 NIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAERK 110 (232)
T ss_pred ceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecccc
Confidence 677888889999999999666 56689999997654333222 67999999999999999999886543
Q ss_pred -----CceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeecc
Q 011519 126 -----DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCF 200 (484)
Q Consensus 126 -----~~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Df 200 (484)
+..+|||||++|.+|.++.. ++. ....+++.+|..+|+. |++|||+||+||+++.+| ++|+||
T Consensus 111 ~~~~~~~~~lvmEyi~G~tL~~~~~------~~~----~~~~~i~~~l~~lH~~-gi~H~Dikp~Nili~~~g-i~liDf 178 (232)
T PRK10359 111 TLRYAHTYIMLIEYIEGVELNDMPE------ISE----DVKAKIKASIESLHQH-GMVSGDPHKGNFIVSKNG-LRIIDL 178 (232)
T ss_pred cccccCCeEEEEEEECCccHHHhhh------ccH----HHHHHHHHHHHHHHHc-CCccCCCChHHEEEeCCC-EEEEEC
Confidence 35789999999999988742 333 2456999999999999 999999999999999888 999999
Q ss_pred CCccccCCCCcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHh
Q 011519 201 GLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLL 246 (484)
Q Consensus 201 G~a~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~ 246 (484)
|........... ..++....+..++|+||||+++.-+.
T Consensus 179 g~~~~~~e~~a~--------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 179 SGKRCTAQRKAK--------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred CCcccccchhhH--------HHHHHHhHhcccccccceeEeehHHH
Confidence 987655322111 11334445678999999999887664
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.1e-24 Score=224.80 Aligned_cols=247 Identities=15% Similarity=0.063 Sum_probs=184.4
Q ss_pred ccccCCCCCCceEEEEE-eCCCcEEEEEEecCC--CCcc----HHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEe
Q 011519 61 IVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRS--AWPD----ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (484)
Q Consensus 61 ~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~--~~~~----~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 133 (484)
....+|.|++|.|+... .......+.|..... .... ...+..|+-+-..++|||++..+..+.+.....-+||
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE 401 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME 401 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence 34557999999888887 334444555544311 1111 1225668888888999999998888877766666699
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----
Q 011519 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 209 (484)
Q Consensus 134 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~---- 209 (484)
||++ +|..++. ..+.++..++..++.|++.|+.|+|+. ||.|||+|++|++++.+|.+||+|||.+......
T Consensus 402 ~~~~-Dlf~~~~--~~~~~~~~e~~c~fKqL~~Gv~y~h~~-GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~ 477 (601)
T KOG0590|consen 402 YCPY-DLFSLVM--SNGKLTPLEADCFFKQLLRGVKYLHSM-GLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKN 477 (601)
T ss_pred cccH-HHHHHHh--cccccchhhhhHHHHHHHHHHHHHHhc-CceeccCccccEEEecCCceEEeecCcceeeccCcchh
Confidence 9999 9999996 334688899999999999999999999 9999999999999999999999999998764432
Q ss_pred ----CcccCCCCCCCcccccCCCCCC-CCceeehHHHHHHHhhCCCCCCchhhHHhh--h-ccccccccccccCCCChHH
Q 011519 210 ----RSYSTNLAFTPPEYLRTGRVTP-ESVMYSFGTLLLDLLSGKHIPPSHALDLIR--D-RNIQTLTDSCLEGQFSSDE 281 (484)
Q Consensus 210 ----~~~~~t~~y~aPE~~~~~~~~~-~~Dv~slG~~l~el~tg~~p~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~ 281 (484)
....|+-+|+|||++.+..|++ ..||||.|++++.|++|+.|+......... . ..........-...+...+
T Consensus 478 ~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 557 (601)
T KOG0590|consen 478 IHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLSLL 557 (601)
T ss_pred hhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChHHHHHhc
Confidence 3467889999999999999877 579999999999999999776432211110 0 0000000000011123456
Q ss_pred HHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 282 GTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 282 ~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
+...+.+|.++|+.||.+|.|+.+|++.=|
T Consensus 558 p~~~~~~~~~~l~~~P~~R~ti~~i~~d~W 587 (601)
T KOG0590|consen 558 PRETRIIIYRMLQLDPTKRITIEQILNDEW 587 (601)
T ss_pred hhhHHHHHHHHccCChhheecHHHHhhChH
Confidence 788999999999999999999999998733
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.6e-24 Score=210.68 Aligned_cols=224 Identities=16% Similarity=0.171 Sum_probs=188.7
Q ss_pred CCCCCCceEEEEE----eCCCcEEEEEEecCCCCcc--HHHHHHHHHHHhcCC-CCceeeeeeeeeeCCceEEEEecCCC
Q 011519 65 HGEKAPNVVYKGK----LENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVAEYMPN 137 (484)
Q Consensus 65 lG~G~~g~Vy~~~----~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~lv~Ey~~~ 137 (484)
+|.|+||.|+++. .+.+..+|+|++++..... ......|..++..++ ||.+|++.-.+..+...++++++..|
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rg 81 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRG 81 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhccc
Confidence 5999999999886 2457789999987653221 224567888888886 99999999999999999999999999
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCCcccCCCC
Q 011519 138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA 217 (484)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~t~~ 217 (484)
|.|...+. ....+++.....+...++-++.++|+. +++|||+|++||+++.+|.+++.|||+++..-..+..+||..
T Consensus 82 g~lft~l~--~~~~f~~~~~~~~~aelaLald~lh~l-~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~cgt~e 158 (612)
T KOG0603|consen 82 GDLFTRLS--KEVMFDELDVAFYLAELALALDHLHKL-GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIACGTYE 158 (612)
T ss_pred chhhhccc--cCCchHHHHHHHHHHHHHHHHhhcchh-HHHHhcccccceeecccCccccCCchhhhHhHhhhhcccchh
Confidence 99999986 455678888899999999999999999 999999999999999999999999999998777666699999
Q ss_pred CCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHHhccCC
Q 011519 218 FTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEP 297 (484)
Q Consensus 218 y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 297 (484)
|||||++. ....++|.||||++++||+||..||..+....+. .. ....|...+..+.+++..++..+|
T Consensus 159 ymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~~~~~~Il--------~~--~~~~p~~l~~~a~~~~~~l~~r~p 226 (612)
T KOG0603|consen 159 YRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGGDTMKRIL--------KA--ELEMPRELSAEARSLFRQLFKRNP 226 (612)
T ss_pred hhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCchHHHHHHh--------hh--ccCCchhhhHHHHHHHHHHHhhCH
Confidence 99999998 5677999999999999999999998763222221 11 123577788999999999999999
Q ss_pred CCCCCh
Q 011519 298 RERPNP 303 (484)
Q Consensus 298 ~~Rps~ 303 (484)
..|.-.
T Consensus 227 ~nrLg~ 232 (612)
T KOG0603|consen 227 ENRLGA 232 (612)
T ss_pred HHHhcc
Confidence 999643
|
|
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.8e-23 Score=183.11 Aligned_cols=141 Identities=15% Similarity=0.133 Sum_probs=112.2
Q ss_pred cccCCCCCCceEEEEEeCCCcEEEEEEecCCCCcc--------------------------HHHHHHHHHHHhcCCCCce
Q 011519 62 VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD--------------------------ARQFLEEARAVGQLRNRRL 115 (484)
Q Consensus 62 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--------------------------~~~~~~E~~~l~~l~hpni 115 (484)
.+.||+|+||.||+|...+|+.||||+++...... ...+..|...+.++.|++|
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 46789999999999997689999999997653110 1123578999999999987
Q ss_pred eeeeeeeeeCCceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhc-CCCcccccccccceeecCCCC
Q 011519 116 ANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTS-KERALYHDLNAYRIVFDDDVN 194 (484)
Q Consensus 116 v~l~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~-~~~ivH~Dlkp~Nill~~~~~ 194 (484)
.....+... ..+|||||++|+++..... ....++......++.|++.+|.++|+ . |++||||||+|||++ ++.
T Consensus 82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l--~~~~~~~~~~~~i~~~l~~~l~~lH~~~-givHrDlkP~NIll~-~~~ 155 (190)
T cd05145 82 PVPEPILLK--KNVLVMEFIGDDGSPAPRL--KDVPLEEEEAEELYEQVVEQMRRLYQEA-GLVHGDLSEYNILYH-DGK 155 (190)
T ss_pred CCceEEEec--CCEEEEEEecCCCchhhhh--hhccCCHHHHHHHHHHHHHHHHHHHHhC-CEecCCCChhhEEEE-CCC
Confidence 544444333 2489999999886544322 23467888999999999999999999 7 999999999999999 899
Q ss_pred ceeeccCCccccCC
Q 011519 195 PRLSCFGLMKNSRD 208 (484)
Q Consensus 195 ~kl~DfG~a~~~~~ 208 (484)
++|+|||++.....
T Consensus 156 ~~liDFG~a~~~~~ 169 (190)
T cd05145 156 PYIIDVSQAVELDH 169 (190)
T ss_pred EEEEEcccceecCC
Confidence 99999999887654
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=8e-23 Score=210.99 Aligned_cols=243 Identities=18% Similarity=0.196 Sum_probs=177.9
Q ss_pred cccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCC-ccHH---HHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEe
Q 011519 58 MENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAW-PDAR---QFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~---~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 133 (484)
++...+.||.+.|=+|.+|+++.|. |+||++-+... -..+ +-+.|++ ...++|||++.+.-+.....-.|||-+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRq 101 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQ 101 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHH
Confidence 5566788899999999999998885 99999855432 2233 4445555 555689999999988878888899999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccC--C--C
Q 011519 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR--D--G 209 (484)
Q Consensus 134 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~--~--~ 209 (484)
|+.+ +|.|.|. .+.-+...+..-|+.|++.||.-+|.. ||+|+|||.+||||++-..+.|+||..-+..- . .
T Consensus 102 yvkh-nLyDRlS--TRPFL~~iEKkWiaFQLL~al~qcH~~-gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNP 177 (1431)
T KOG1240|consen 102 YVKH-NLYDRLS--TRPFLVLIEKKWIAFQLLKALSQCHKL-GVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNP 177 (1431)
T ss_pred HHhh-hhhhhhc--cchHHHHHHHHHHHHHHHHHHHHHHHc-CccccccccceEEEeeechhhhhcccccCCccCCCCCc
Confidence 9966 8999995 233356778888999999999999999 99999999999999999999999998654321 1 1
Q ss_pred C-------cccCCCCCCCcccccCC----------C-CCCCCceeehHHHHHHHhhCCCCCCc-hhhHHhhhcccccccc
Q 011519 210 R-------SYSTNLAFTPPEYLRTG----------R-VTPESVMYSFGTLLLDLLSGKHIPPS-HALDLIRDRNIQTLTD 270 (484)
Q Consensus 210 ~-------~~~~t~~y~aPE~~~~~----------~-~~~~~Dv~slG~~l~el~tg~~p~~~-~~~~~~~~~~~~~~~~ 270 (484)
. +......|+|||.+... . .+++.||||+||++.||++-..|+.. ...-..+... .....
T Consensus 178 adf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr~~~-~~~~e 256 (1431)
T KOG1240|consen 178 ADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAYRSGN-ADDPE 256 (1431)
T ss_pred ccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhHhccC-ccCHH
Confidence 1 11223579999987531 2 67899999999999999997544332 1111111111 11111
Q ss_pred ccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 271 SCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 271 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
..+. .++ ...++.++..|++.||.+|.|+++.++.-+
T Consensus 257 ~~Le-~Ie---d~~~Rnlil~Mi~rdPs~RlSAedyL~~yr 293 (1431)
T KOG1240|consen 257 QLLE-KIE---DVSLRNLILSMIQRDPSKRLSAEDYLQKYR 293 (1431)
T ss_pred HHHH-hCc---CccHHHHHHHHHccCchhccCHHHHHHhhh
Confidence 1111 111 246899999999999999999999998733
|
|
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.1e-21 Score=172.97 Aligned_cols=179 Identities=15% Similarity=0.088 Sum_probs=137.6
Q ss_pred ccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCcc----HHHHHHHHHHHhcCC-CCceeeeeeeeeeCCceEEEEecC
Q 011519 61 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD----ARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 61 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~----~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~lv~Ey~ 135 (484)
+...|++|+||+||.+.. .+.+++.+.+.....-. ...|.+|+++|++|. |++|++++++ +..+++|||+
T Consensus 6 ~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI 80 (218)
T PRK12274 6 VNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYL 80 (218)
T ss_pred cceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeee
Confidence 445679999999997766 66788888876654311 225889999999995 5889999886 3469999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccc-cccceeecCCCCceeeccCCccccCCCCc---
Q 011519 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDL-NAYRIVFDDDVNPRLSCFGLMKNSRDGRS--- 211 (484)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dl-kp~Nill~~~~~~kl~DfG~a~~~~~~~~--- 211 (484)
.|.+|.+.+. .. ...++.|++.+|.++|+. ||+|||| ||+|||++.++.++|+|||++........
T Consensus 81 ~G~~L~~~~~---~~------~~~~~~qi~~~L~~lH~~-GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r 150 (218)
T PRK12274 81 AGAAMYQRPP---RG------DLAYFRAARRLLQQLHRC-GVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMR 150 (218)
T ss_pred cCccHHhhhh---hh------hHHHHHHHHHHHHHHHHC-cCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHH
Confidence 9999876542 11 135788999999999999 9999999 79999999999999999999986544321
Q ss_pred --------------ccCCCCCCCcccccCC-CCC-CCCceeehHHHHHHHhhCCCCCCc
Q 011519 212 --------------YSTNLAFTPPEYLRTG-RVT-PESVMYSFGTLLLDLLSGKHIPPS 254 (484)
Q Consensus 212 --------------~~~t~~y~aPE~~~~~-~~~-~~~Dv~slG~~l~el~tg~~p~~~ 254 (484)
...++.|++|+...-- ..+ .+.+.++-|.-+|.++|++.+..+
T Consensus 151 ~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~ 209 (218)
T PRK12274 151 LLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWE 209 (218)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccc
Confidence 1136778888754322 233 466888999999999999977654
|
|
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.5e-21 Score=174.10 Aligned_cols=132 Identities=15% Similarity=0.128 Sum_probs=105.0
Q ss_pred ccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhcC-----CCCceeeeeeeeeeCC---c-eEEEEe
Q 011519 63 SEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-----RNRRLANLLGCCCEGD---E-RLLVAE 133 (484)
Q Consensus 63 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~hpniv~l~~~~~~~~---~-~~lv~E 133 (484)
..||+|+||.||. ...++.. +||++........+.+.+|+.+++.+ .||||++++|++.++. . ..+|+|
T Consensus 8 ~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~e 85 (210)
T PRK10345 8 SPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIAD 85 (210)
T ss_pred ceecCCCceEEEE-CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEec
Confidence 4569999999996 4334444 69998765444567899999999999 5799999999998863 3 337899
Q ss_pred c--CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHH-HHhhcCCCcccccccccceeecC----CCCceeeccCC
Q 011519 134 Y--MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEAL-EYCTSKERALYHDLNAYRIVFDD----DVNPRLSCFGL 202 (484)
Q Consensus 134 y--~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L-~~lH~~~~ivH~Dlkp~Nill~~----~~~~kl~DfG~ 202 (484)
| +++|||.+++.+ ..+++. ..++.|++.++ .|||+. +||||||||+|||++. ++.++|+||+.
T Consensus 86 ~~G~~~~tL~~~l~~---~~~~e~--~~~~~~~L~~l~~yLh~~-~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G 155 (210)
T PRK10345 86 FDGKPSITLTEFAEQ---CRYEED--VAQLRQLLKKLKRYLLDN-RIVTMELKPQNILCQRISESEVIPVVCDNIG 155 (210)
T ss_pred CCCCcchhHHHHHHc---ccccHh--HHHHHHHHHHHHHHHHHC-CEeecCCCHHHEEEeccCCCCCcEEEEECCC
Confidence 9 557999999953 346655 46688888888 999999 9999999999999973 34799999543
|
|
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.8e-22 Score=184.46 Aligned_cols=227 Identities=20% Similarity=0.183 Sum_probs=147.1
Q ss_pred cccCCCCCCceEEEEEe-CCCcEEEEEEecCCC---CccHHHHHHHHHHHhcCCC----------Cceeeeeeee-----
Q 011519 62 VSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRN----------RRLANLLGCC----- 122 (484)
Q Consensus 62 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h----------pniv~l~~~~----- 122 (484)
.+.||.|+++.||.+++ .+++.+|||++.... ....+++.+|.-....+.+ -.++.-++..
T Consensus 17 ~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~~~ 96 (288)
T PF14531_consen 17 GRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIPGK 96 (288)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEETTS
T ss_pred ccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEcCC
Confidence 35579999999999995 569999999875433 2236677777766655433 1122222221
Q ss_pred ----eeCC--------ceEEEEecCCCCCHHhhhc---cCCC--CCCCHHHHHHHHHHHHHHHHHhhcCCCccccccccc
Q 011519 123 ----CEGD--------ERLLVAEYMPNDTLAKHLF---HWET--QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAY 185 (484)
Q Consensus 123 ----~~~~--------~~~lv~Ey~~~gsL~~~l~---~~~~--~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~ 185 (484)
.... +.+++|+-+ .++|.+++. .... ..+....++.+..|+++.+++||+. |+||+||||+
T Consensus 97 ~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~-GlVHgdi~~~ 174 (288)
T PF14531_consen 97 PPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY-GLVHGDIKPE 174 (288)
T ss_dssp -SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT-TEEEST-SGG
T ss_pred CcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc-ceEeccccee
Confidence 1111 347788888 448888764 1111 1233455677779999999999999 9999999999
Q ss_pred ceeecCCCCceeeccCCccccCCCCc-ccCCCCCCCcccccCC--------CCCCCCceeehHHHHHHHhhCCCCCCchh
Q 011519 186 RIVFDDDVNPRLSCFGLMKNSRDGRS-YSTNLAFTPPEYLRTG--------RVTPESVMYSFGTLLLDLLSGKHIPPSHA 256 (484)
Q Consensus 186 Nill~~~~~~kl~DfG~a~~~~~~~~-~~~t~~y~aPE~~~~~--------~~~~~~Dv~slG~~l~el~tg~~p~~~~~ 256 (484)
|++++.+|.+.|+||+.....+.... ...+..|.+||..... .++.+.|.|+||+++|.|+||..||....
T Consensus 175 nfll~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~ 254 (288)
T PF14531_consen 175 NFLLDQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSS 254 (288)
T ss_dssp GEEE-TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCG
T ss_pred eEEEcCCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCCCC
Confidence 99999999999999998776655433 3455789999977432 37889999999999999999999876432
Q ss_pred hHHhhhccccccccccccCCCChHHHHHHHHHHHHHhccCCCCC
Q 011519 257 LDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300 (484)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 300 (484)
....... .. .... +.++.+..||..+|+.||.+|
T Consensus 255 ~~~~~~~----~f-----~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 255 PEADPEW----DF-----SRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp GGSTSGG----GG-----TTSS----HHHHHHHHHHT-SSGGGS
T ss_pred ccccccc----cc-----hhcC-CcCHHHHHHHHHHccCCcccC
Confidence 2111111 11 1223 678899999999999999987
|
|
| >KOG0553 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.1e-21 Score=174.11 Aligned_cols=107 Identities=23% Similarity=0.335 Sum_probs=103.8
Q ss_pred hHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHH
Q 011519 374 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQ 453 (484)
Q Consensus 374 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 453 (484)
....|..++.+|+.+++.++|++|+..|++||+++|. ++.+|.|||.+|.++|+|+.|++||+.||.+||.++++|-++
T Consensus 77 ~~~~AE~LK~eGN~~m~~~~Y~eAv~kY~~AI~l~P~-nAVyycNRAAAy~~Lg~~~~AVkDce~Al~iDp~yskay~RL 155 (304)
T KOG0553|consen 77 DKALAESLKNEGNKLMKNKDYQEAVDKYTEAIELDPT-NAVYYCNRAAAYSKLGEYEDAVKDCESALSIDPHYSKAYGRL 155 (304)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCC-cchHHHHHHHHHHHhcchHHHHHHHHHHHhcChHHHHHHHHH
Confidence 5678899999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 454 AAALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 454 g~~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
|.+|+.+|++++|++.|++||+|||++.
T Consensus 156 G~A~~~~gk~~~A~~aykKaLeldP~Ne 183 (304)
T KOG0553|consen 156 GLAYLALGKYEEAIEAYKKALELDPDNE 183 (304)
T ss_pred HHHHHccCcHHHHHHHHHhhhccCCCcH
Confidence 9999999999999999999999999763
|
|
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.9e-21 Score=189.51 Aligned_cols=209 Identities=22% Similarity=0.332 Sum_probs=161.4
Q ss_pred HhcCCCCceeeeeeeeeeCCceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccc
Q 011519 107 VGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR 186 (484)
Q Consensus 107 l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~N 186 (484)
|+.+.|.|+.+++|.+.++...++|.+||..|+|.+.+.. ....+++.-...+.++|+.||.|||+...-.|+.+++.|
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~-~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~n 79 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN-EDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSN 79 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc-cccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeecccc
Confidence 4578999999999999999999999999999999999974 456789999999999999999999998333899999999
Q ss_pred eeecCCCCceeeccCCccccCCC------CcccCCCCCCCcccccCCC-------CCCCCceeehHHHHHHHhhCCCCCC
Q 011519 187 IVFDDDVNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGR-------VTPESVMYSFGTLLLDLLSGKHIPP 253 (484)
Q Consensus 187 ill~~~~~~kl~DfG~a~~~~~~------~~~~~t~~y~aPE~~~~~~-------~~~~~Dv~slG~~l~el~tg~~p~~ 253 (484)
.++|....+||+|||+....... .......-|.|||.+.+.. .+.++||||||++++|+++.+.||.
T Consensus 80 Clvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~ 159 (484)
T KOG1023|consen 80 CLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFD 159 (484)
T ss_pred ceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccc
Confidence 99999999999999998776431 1112235699999998631 4678999999999999999999887
Q ss_pred chhhHHhhhcccccc---ccccccCCCC-h-HHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhcC
Q 011519 254 SHALDLIRDRNIQTL---TDSCLEGQFS-S-DEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316 (484)
Q Consensus 254 ~~~~~~~~~~~~~~~---~~~~~~~~~~-~-~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 316 (484)
..............+ .....++... . ...+++..++..||..+|..||++..+-..++.+...
T Consensus 160 ~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~ 227 (484)
T KOG1023|consen 160 LRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKG 227 (484)
T ss_pred cccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhccc
Confidence 532211110011111 0111111111 1 3445799999999999999999999999998876654
|
|
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.8e-20 Score=174.31 Aligned_cols=192 Identities=16% Similarity=0.169 Sum_probs=145.6
Q ss_pred CCCceeeeeeeeeeC---------------------------CceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHH
Q 011519 111 RNRRLANLLGCCCEG---------------------------DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALH 163 (484)
Q Consensus 111 ~hpniv~l~~~~~~~---------------------------~~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~q 163 (484)
+|||||+++++|.+. ..+|+||..++. ||..++. .+..+.....-++.|
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~---~~~~s~r~~~~~laQ 349 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLW---TRHRSYRTGRVILAQ 349 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHh---cCCCchHHHHHHHHH
Confidence 599999999987542 236999998866 9999994 455777888899999
Q ss_pred HHHHHHHhhcCCCcccccccccceeec--CCC--CceeeccCCccccCC----------CCcccCCCCCCCcccccCCC-
Q 011519 164 IAEALEYCTSKERALYHDLNAYRIVFD--DDV--NPRLSCFGLMKNSRD----------GRSYSTNLAFTPPEYLRTGR- 228 (484)
Q Consensus 164 i~~~L~~lH~~~~ivH~Dlkp~Nill~--~~~--~~kl~DfG~a~~~~~----------~~~~~~t~~y~aPE~~~~~~- 228 (484)
+++|+.|||.+ ||.|||+|++|||+. +++ .+.|+|||.+-.... .-...|.-.-||||+....+
T Consensus 350 lLEav~hL~~h-gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PG 428 (598)
T KOG4158|consen 350 LLEAVTHLHKH-GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPG 428 (598)
T ss_pred HHHHHHHHHHc-cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCC
Confidence 99999999998 999999999999993 443 478999998653322 12334566789999986422
Q ss_pred -----CCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHHhccCCCCCCCh
Q 011519 229 -----VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNP 303 (484)
Q Consensus 229 -----~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~ 303 (484)
.-.++|.|+.|.+.||+++...||+............++- . -+..|..+++.+.+++...|+.||.+|+|.
T Consensus 429 p~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~---q-LPalp~~vpp~~rqlV~~lL~r~pskRvsp 504 (598)
T KOG4158|consen 429 PNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQES---Q-LPALPSRVPPVARQLVFDLLKRDPSKRVSP 504 (598)
T ss_pred CceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhh---h-CCCCcccCChHHHHHHHHHhcCCccccCCc
Confidence 2348999999999999999999998743332222222211 1 123566778899999999999999999998
Q ss_pred HHHHHHHH
Q 011519 304 RSLVTALV 311 (484)
Q Consensus 304 ~~il~~l~ 311 (484)
.-..+.|.
T Consensus 505 ~iAANvl~ 512 (598)
T KOG4158|consen 505 NIAANVLN 512 (598)
T ss_pred cHHHhHHH
Confidence 77666654
|
|
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.3e-20 Score=171.08 Aligned_cols=156 Identities=14% Similarity=0.077 Sum_probs=117.1
Q ss_pred CHHHHHHHhcCCCcccccccCCCCCCceEEEEE--eCCCcEEEEEEecCCCCc-------------------c-----HH
Q 011519 45 SIETLRTATSGFAMENIVSEHGEKAPNVVYKGK--LENQFRIAVKRFNRSAWP-------------------D-----AR 98 (484)
Q Consensus 45 ~~~~~~~~~~~f~~~~~~~~lG~G~~g~Vy~~~--~~~~~~vavK~~~~~~~~-------------------~-----~~ 98 (484)
+..++....+.=.-|.+.+.||.|+||.||+|+ ..+|+.||||+++..... . ..
T Consensus 16 ~~~~~~~~~~~~~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (237)
T smart00090 16 TRLALYSLLNRGILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRL 95 (237)
T ss_pred HHHHHHHHHhcCchHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHH
Confidence 333433333332356788889999999999998 568999999998754210 0 12
Q ss_pred HHHHHHHHHhcCCCC--ceeeeeeeeeeCCceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC
Q 011519 99 QFLEEARAVGQLRNR--RLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKER 176 (484)
Q Consensus 99 ~~~~E~~~l~~l~hp--niv~l~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ 176 (484)
.+..|+.++.++.+. .+.++++. ...+|||||++|++|...+. ....+.......++.||+.+|.+||+. |
T Consensus 96 ~~~~E~~~L~~L~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~~-g 168 (237)
T smart00090 96 WAEKEFRNLQRLYEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRL--KDVEPEEEEEFELYDDILEEMRKLYKE-G 168 (237)
T ss_pred HHHHHHHHHHHHHhcCCCCCeeeEe----cCceEEEEEecCCccccccc--ccCCcchHHHHHHHHHHHHHHHHHHhc-C
Confidence 356899999999753 34444443 23589999999988877653 233466667789999999999999999 8
Q ss_pred -cccccccccceeecCCCCceeeccCCccccCC
Q 011519 177 -ALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 208 (484)
Q Consensus 177 -ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~ 208 (484)
++||||||+||+++ ++.++|+|||.+.....
T Consensus 169 ~iiH~Dikp~NIli~-~~~i~LiDFg~a~~~~~ 200 (237)
T smart00090 169 ELVHGDLSEYNILVH-DGKVVIIDVSQSVELDH 200 (237)
T ss_pred CEEeCCCChhhEEEE-CCCEEEEEChhhhccCC
Confidence 99999999999999 88999999999775443
|
|
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.6e-19 Score=164.83 Aligned_cols=134 Identities=16% Similarity=0.164 Sum_probs=113.2
Q ss_pred ccCCCCCCceEEEEEeCCCcEEEEEEecCCCCcc--------HHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEec
Q 011519 63 SEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD--------ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (484)
Q Consensus 63 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--------~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey 134 (484)
+.||+|++|.||+|.. +|..|+||+........ ..++.+|+.++..++|++|+....++...+..++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 4679999999999987 66689999876433211 23578899999999999988777777777888999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccc
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN 205 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 205 (484)
++|++|.+++... .+ .+..++.+++.+|.++|+. +++|+|++|.|||++ ++.++|+|||++..
T Consensus 81 ~~G~~L~~~~~~~-----~~-~~~~i~~~i~~~l~~lH~~-~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSN-----GM-EELELSREIGRLVGKLHSA-GIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhc-----cH-HHHHHHHHHHHHHHHHHhC-CcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 9999999998521 22 7889999999999999999 999999999999999 78999999998754
|
|
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.81 E-value=7.8e-20 Score=192.50 Aligned_cols=240 Identities=17% Similarity=0.128 Sum_probs=173.2
Q ss_pred cccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCC---CCceeeeeeeeeeCCceEEEEec
Q 011519 58 MENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR---NRRLANLLGCCCEGDERLLVAEY 134 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---hpniv~l~~~~~~~~~~~lv~Ey 134 (484)
.+.|-+.+|+|+||+||+|...+|+.||||+-+....- .|.--.+++.+|+ -+.|..+.....-.+..+||+||
T Consensus 699 ~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~W---EfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~ey 775 (974)
T KOG1166|consen 699 KFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPW---EFYICLQVMERLKPQMLPSIMHISSAHVFQNASVLVSEY 775 (974)
T ss_pred eEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCce---eeeehHHHHHhhchhhhcchHHHHHHHccCCcceeeeec
Confidence 45666789999999999999778999999998765421 1222334455555 23444555555556677999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeec-------CCCCceeeccCCccc--
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD-------DDVNPRLSCFGLMKN-- 205 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~-------~~~~~kl~DfG~a~~-- 205 (484)
.+.|||.+++. ..+.++|..+..+..|++.-++.||.. +|||+||||+|+||. ++..++|+|||.+-.
T Consensus 776 ~~~Gtlld~~N--~~~~m~e~lv~~~~~qml~ive~lH~~-~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~ 852 (974)
T KOG1166|consen 776 SPYGTLLDLIN--TNKVMDEYLVMFFSCQMLRIVEHLHAM-GIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMK 852 (974)
T ss_pred cccccHHHhhc--cCCCCCchhhhHHHHHHHHHHHHHHhc-ceecccCCcceeEeecccCCCCcccceEEEecccceeee
Confidence 99999999996 566799999999999999999999998 999999999999994 345689999998754
Q ss_pred -cCCCC---cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHH
Q 011519 206 -SRDGR---SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 281 (484)
Q Consensus 206 -~~~~~---~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (484)
+.++. ...+|-.+-.+|+..|..++...|.|.|..+++-|+.|+.. .... +....+... .+.-+..+
T Consensus 853 lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~------q~~~-g~~~~~~~~-~~Ry~~~~- 923 (974)
T KOG1166|consen 853 LFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM------EVKN-GSSWMVKTN-FPRYWKRD- 923 (974)
T ss_pred EcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH------HhcC-Ccceecccc-chhhhhHH-
Confidence 33332 34567889999999999999999999999999999999842 1111 111111111 11112222
Q ss_pred HHHHHHHHHHHhccCCCCCCChHHHHHHHHhhh
Q 011519 282 GTELVRLASRCLQYEPRERPNPRSLVTALVTLQ 314 (484)
Q Consensus 282 ~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~ 314 (484)
-.-+|...+|..|-..=|...++...|+...
T Consensus 924 --~W~~~F~~lLN~~~~~~p~l~~lr~~~~~~~ 954 (974)
T KOG1166|consen 924 --MWNKFFDLLLNPDCDTLPNLQELRTELEEVL 954 (974)
T ss_pred --HHHHHHHHHhCcCcccchhHHHHHHHHHHHH
Confidence 3445666666644444477877777776654
|
|
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.4e-20 Score=180.48 Aligned_cols=170 Identities=23% Similarity=0.340 Sum_probs=127.6
Q ss_pred ceEEEEecCCCCCHHhhhccCC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccc
Q 011519 127 ERLLVAEYMPNDTLAKHLFHWE-TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN 205 (484)
Q Consensus 127 ~~~lv~Ey~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 205 (484)
.++|.|++|...+|.+||.+++ ....++...+.++.|++.|+.| + +.+|+|+||.||++..+..+||.|||+...
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k-~~ihrdlkp~nif~~~d~q~kIgDFgl~ts 405 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---K-GLIHRDLKPSNIFFSDDDQLKIGDFGLVTS 405 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---c-cchhhhccccccccccchhhhhhhhhheee
Confidence 5799999999999999997433 3456888999999999999999 6 999999999999999999999999999765
Q ss_pred cCCC----------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccC
Q 011519 206 SRDG----------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEG 275 (484)
Q Consensus 206 ~~~~----------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 275 (484)
.... +...||..||+||.+.+..|+.++||||||++|+||++-- .... ........+.+..+..
T Consensus 406 ~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f---~T~~---er~~t~~d~r~g~ip~ 479 (516)
T KOG1033|consen 406 QDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQF---STQF---ERIATLTDIRDGIIPP 479 (516)
T ss_pred cccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHh---ccHH---HHHHhhhhhhcCCCCh
Confidence 4432 3567899999999999999999999999999999999821 1110 0011111111111110
Q ss_pred CCChHHHHHHHHHHHHHhccCCCCCCChHHHH
Q 011519 276 QFSSDEGTELVRLASRCLQYEPRERPNPRSLV 307 (484)
Q Consensus 276 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il 307 (484)
.+-.+ .+.-..|+.+++.+.|.+||++.+..
T Consensus 480 ~~~~d-~p~e~~ll~~lls~~p~~RP~~~~~~ 510 (516)
T KOG1033|consen 480 EFLQD-YPEEYTLLQQLLSPSPEERPSAIEVA 510 (516)
T ss_pred HHhhc-CcHHHHHHHHhcCCCcccCchHHHHh
Confidence 11111 23456899999999999999655443
|
|
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.8e-19 Score=159.63 Aligned_cols=129 Identities=18% Similarity=0.226 Sum_probs=105.8
Q ss_pred CCCCCCceEEEEEeCCCcEEEEEEecCCCCc--------cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCC
Q 011519 65 HGEKAPNVVYKGKLENQFRIAVKRFNRSAWP--------DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (484)
Q Consensus 65 lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~ 136 (484)
||+|+||+||+|.+ ++..|++|........ ...++.+|+.++..++|+++.....++...+..++||||++
T Consensus 2 ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~ 80 (199)
T TIGR03724 2 IAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYIE 80 (199)
T ss_pred CCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEC
Confidence 69999999999995 5678999986543221 12457789999999998876555555556677899999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccc
Q 011519 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN 205 (484)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 205 (484)
|++|.+++.. ... .++.+++.+|.+||+. |++|+|++|.||+++ ++.++++|||++..
T Consensus 81 g~~l~~~~~~--~~~-------~~~~~i~~~l~~lH~~-gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 81 GKPLKDVIEE--GND-------ELLREIGRLVGKLHKA-GIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred CccHHHHHhh--cHH-------HHHHHHHHHHHHHHHC-CeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 9999998742 111 7899999999999999 999999999999999 89999999998765
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.4e-18 Score=156.77 Aligned_cols=137 Identities=17% Similarity=0.125 Sum_probs=108.5
Q ss_pred ccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCc----------------------cHHHHHHHHHHHhcCCCCc--
Q 011519 59 ENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP----------------------DARQFLEEARAVGQLRNRR-- 114 (484)
Q Consensus 59 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----------------------~~~~~~~E~~~l~~l~hpn-- 114 (484)
|.+.+.||.|+||.||++...+|+.||||++...... ....+..|+.++..+.|++
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~ 96 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFP 96 (198)
T ss_pred hhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCC
Confidence 5666788999999999999878999999987643210 0113567888999887774
Q ss_pred eeeeeeeeeeCCceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCC
Q 011519 115 LANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN 194 (484)
Q Consensus 115 iv~l~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~ 194 (484)
++..++ ....++||||++|++|...... .....++.+++.++.++|+. |++|+||||+||+++.++.
T Consensus 97 v~~~~~----~~~~~lv~e~~~g~~L~~~~~~--------~~~~~~~~~i~~~l~~lh~~-gi~H~Dl~p~Nill~~~~~ 163 (198)
T cd05144 97 VPKPID----WNRHAVVMEYIDGVELYRVRVL--------EDPEEVLDEILEEIVKAYKH-GIIHGDLSEFNILVDDDEK 163 (198)
T ss_pred CCceee----cCCceEEEEEeCCcchhhcccc--------ccHHHHHHHHHHHHHHHHHC-CCCcCCCCcccEEEcCCCc
Confidence 444443 2345899999999999876420 34567889999999999998 9999999999999999999
Q ss_pred ceeeccCCccccCC
Q 011519 195 PRLSCFGLMKNSRD 208 (484)
Q Consensus 195 ~kl~DfG~a~~~~~ 208 (484)
++|+|||++.....
T Consensus 164 ~~liDfg~~~~~~~ 177 (198)
T cd05144 164 IYIIDWPQMVSTDH 177 (198)
T ss_pred EEEEECCccccCCC
Confidence 99999999865544
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.7e-19 Score=186.57 Aligned_cols=209 Identities=17% Similarity=0.153 Sum_probs=148.1
Q ss_pred cccccccCCCCCCceEEEEEeC-CCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCC
Q 011519 58 MENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~ 136 (484)
+++.|+.+..|+||.||.++++ +.+.+|+ +++++.. +++. ++.....|.+|
T Consensus 84 df~~IklisngAygavylvrh~~trqrfa~-kiNkq~l-----ilRn--ilt~a~npfvv-------------------- 135 (1205)
T KOG0606|consen 84 DFNTIKLISNGAYGAVYLVRHKETRQRFAM-KINKQNL-----ILRN--ILTFAGNPFVV-------------------- 135 (1205)
T ss_pred ccceeEeeccCCCCceeeeeccccccchhh-cccccch-----hhhc--cccccCCccee--------------------
Confidence 4567777799999999999954 5778999 4443321 1111 22222333333
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccC---------
Q 011519 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR--------- 207 (484)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~--------- 207 (484)
|+-...++ .-++++.. ++.+++|||+- ||+|||+||+|.+|+.-|.+|++|||+.+...
T Consensus 136 -gDc~tllk--~~g~lPvd--------mvla~Eylh~y-givhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~e 203 (1205)
T KOG0606|consen 136 -GDCATLLK--NIGPLPVD--------MVLAVEYLHSY-GIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKE 203 (1205)
T ss_pred -chhhhhcc--cCCCCcch--------hhHHhHhhccC-CeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhh
Confidence 34444443 22334432 27899999998 99999999999999999999999999976421
Q ss_pred ----------CCCcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCC
Q 011519 208 ----------DGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQF 277 (484)
Q Consensus 208 ----------~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (484)
..+..+||+.|+|||++....|....|.|++|+++||.+.|..||.++..+.+....+...+. ..+-
T Consensus 204 g~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~---wpE~ 280 (1205)
T KOG0606|consen 204 GHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIE---WPEE 280 (1205)
T ss_pred cchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhcc---cccc
Confidence 123468999999999999889999999999999999999999999988544443332222211 1111
Q ss_pred ChHHHHHHHHHHHHHhccCCCCCC---ChHHHHHH
Q 011519 278 SSDEGTELVRLASRCLQYEPRERP---NPRSLVTA 309 (484)
Q Consensus 278 ~~~~~~~l~~li~~cl~~dp~~Rp---s~~~il~~ 309 (484)
....++++++++.++|+.+|..|- .+-++-+|
T Consensus 281 dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h 315 (1205)
T KOG0606|consen 281 DEALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQH 315 (1205)
T ss_pred CcCCCHHHHHHHHHHHHhChHhhcccchhhhhhhc
Confidence 344568899999999999999994 34444443
|
|
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.77 E-value=2e-18 Score=179.01 Aligned_cols=133 Identities=20% Similarity=0.183 Sum_probs=108.2
Q ss_pred ccccCCCCCCceEEEEEeCCCcEEEEEEe-cCC-CCc------cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEE
Q 011519 61 IVSEHGEKAPNVVYKGKLENQFRIAVKRF-NRS-AWP------DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (484)
Q Consensus 61 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~-~~~-~~~------~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 132 (484)
..+.||+|+||+||+|.+.... +++|+. ... ... ..+++.+|++++..++|++++....++......++||
T Consensus 337 ~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~ 415 (535)
T PRK09605 337 PDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKTIVM 415 (535)
T ss_pred ccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCEEEE
Confidence 3466799999999999875543 444432 211 111 1346889999999999999988887777777889999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCcccc
Q 011519 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 206 (484)
Q Consensus 133 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~ 206 (484)
||++|++|.+++. ....++.|++.+|.+||+. |++||||||+|||+ +++.++|+|||+++..
T Consensus 416 E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~-giiHrDlkp~NILl-~~~~~~liDFGla~~~ 477 (535)
T PRK09605 416 EYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKA-GIVHGDLTTSNFIV-RDDRLYLIDFGLGKYS 477 (535)
T ss_pred EecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhC-CCccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence 9999999999884 3577999999999999998 99999999999999 6789999999998663
|
|
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=99.73 E-value=8.8e-18 Score=144.53 Aligned_cols=136 Identities=15% Similarity=0.035 Sum_probs=114.4
Q ss_pred ccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCC--CceeeeeeeeeeCCceEEEEecCCCC
Q 011519 61 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRN--RRLANLLGCCCEGDERLLVAEYMPND 138 (484)
Q Consensus 61 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--pniv~l~~~~~~~~~~~lv~Ey~~~g 138 (484)
+++.+|.|.++.||++...+ ..++||....... ...+.+|+.++..++| .++++++++....+..+++|||++|+
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~ 78 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGE 78 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCe
Confidence 35678999999999999755 6899999865443 4578999999999976 58999999888878899999999887
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcC--CCcccccccccceeecCCCCceeeccCCccccCC
Q 011519 139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK--ERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 208 (484)
Q Consensus 139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~--~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~ 208 (484)
++..+ +......++.+++.+|.++|.. .+++|+|++|.||+++..+.++++|||.+.....
T Consensus 79 ~~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~~~ 141 (155)
T cd05120 79 TLDEV---------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYGPP 141 (155)
T ss_pred ecccC---------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCCCh
Confidence 66543 5567788899999999999985 2699999999999999989999999998865443
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.1e-17 Score=150.84 Aligned_cols=133 Identities=17% Similarity=0.148 Sum_probs=103.1
Q ss_pred CC-CCCCceEEEEEeCCCcEEEEEEecCCCC-------------ccHHHHHHHHHHHhcCCCCce--eeeeeeeeeCC--
Q 011519 65 HG-EKAPNVVYKGKLENQFRIAVKRFNRSAW-------------PDARQFLEEARAVGQLRNRRL--ANLLGCCCEGD-- 126 (484)
Q Consensus 65 lG-~G~~g~Vy~~~~~~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~hpni--v~l~~~~~~~~-- 126 (484)
+| .||.|+||.+... +..++||.+..... ....++.+|+.++..|+|++| +..+++.....
T Consensus 39 lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~~~ 117 (239)
T PRK01723 39 VGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRHGL 117 (239)
T ss_pred eecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeecCc
Confidence 46 7788899999874 56899998854221 123467899999999998774 66776644322
Q ss_pred --ceEEEEecCCC-CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCc
Q 011519 127 --ERLLVAEYMPN-DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLM 203 (484)
Q Consensus 127 --~~~lv~Ey~~~-gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a 203 (484)
..++|||+++| .+|.+++.. .+++.. .+.+|+.+|.+||+. ||+|+||||.|||++.++.++|+|||.+
T Consensus 118 ~~~~~lV~e~l~G~~~L~~~l~~---~~l~~~----~~~~i~~~l~~lH~~-GI~HrDlkp~NILv~~~~~v~LIDfg~~ 189 (239)
T PRK01723 118 FYRADILIERIEGARDLVALLQE---APLSEE----QWQAIGQLIARFHDA-GVYHADLNAHNILLDPDGKFWLIDFDRG 189 (239)
T ss_pred ceeeeEEEEecCCCCCHHHHHhc---CCCCHH----HHHHHHHHHHHHHHC-CCCCCCCCchhEEEcCCCCEEEEECCCc
Confidence 23599999997 699998842 345554 357899999999999 9999999999999998899999999987
Q ss_pred ccc
Q 011519 204 KNS 206 (484)
Q Consensus 204 ~~~ 206 (484)
...
T Consensus 190 ~~~ 192 (239)
T PRK01723 190 ELR 192 (239)
T ss_pred ccC
Confidence 653
|
|
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.5e-17 Score=147.30 Aligned_cols=138 Identities=15% Similarity=0.131 Sum_probs=98.3
Q ss_pred cccCCCCCCceEEEEEeCCCcEEEEEEecCCCCcc--HHHH----------------------HHHHHHHhcCCCC--ce
Q 011519 62 VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD--ARQF----------------------LEEARAVGQLRNR--RL 115 (484)
Q Consensus 62 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~----------------------~~E~~~l~~l~hp--ni 115 (484)
.+.||+|+||+||+|...+++.||||+++...... ...+ ..|...+..+.+. .+
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 45689999999999997789999999987543211 1111 2455555555433 23
Q ss_pred eeeeeeeeeCCceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhc-CCCcccccccccceeecCCCC
Q 011519 116 ANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTS-KERALYHDLNAYRIVFDDDVN 194 (484)
Q Consensus 116 v~l~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~-~~~ivH~Dlkp~Nill~~~~~ 194 (484)
.+.++. ...++||||++|+++...... ..... .....++.+++.++.++|. . +++|+||||+||+++ ++.
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~--~~~~~-~~~~~~~~~~~~~l~~lh~~~-~ivH~Dl~p~Nili~-~~~ 152 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLK--DVRLL-EDPEELYDQILELMRKLYREA-GLVHGDLSEYNILVD-DGK 152 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhh--hhhhc-ccHHHHHHHHHHHHHHHhhcc-CcCcCCCChhhEEEE-CCc
Confidence 444433 245899999999544321110 00011 6678999999999999999 7 999999999999999 899
Q ss_pred ceeeccCCccccCC
Q 011519 195 PRLSCFGLMKNSRD 208 (484)
Q Consensus 195 ~kl~DfG~a~~~~~ 208 (484)
++|+|||.+.....
T Consensus 153 ~~liDfg~a~~~~~ 166 (187)
T cd05119 153 VYIIDVPQAVEIDH 166 (187)
T ss_pred EEEEECcccccccC
Confidence 99999999865443
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.7e-18 Score=178.94 Aligned_cols=254 Identities=13% Similarity=0.108 Sum_probs=193.5
Q ss_pred CcccccccCCCCCCceEEEEEe--CCCcEEEEEEecCCC--CccHHHHHHHHHHHhcCC-CCceeeeeeeeeeCCceEEE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL--ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLV 131 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~lv 131 (484)
..|++++.||+|+|+.|-.... .....+|+|.+.... .....+...|..+-..+. |+|++.+++...+.+..+++
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~ 99 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLS 99 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccc
Confidence 4667778889999999998874 335567777776543 112334445777777776 99999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhh-cCCCcccccccccceeecCCC-CceeeccCCccccCC-
Q 011519 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCT-SKERALYHDLNAYRIVFDDDV-NPRLSCFGLMKNSRD- 208 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH-~~~~ivH~Dlkp~Nill~~~~-~~kl~DfG~a~~~~~- 208 (484)
++|..|+++.+.+........+....-.++.|+..++.|+| .. ++.|+|+||+|.+++..+ .++++|||+|.....
T Consensus 100 ~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~-~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~ 178 (601)
T KOG0590|consen 100 LSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPEN-GVTHRDIKPSNSLLDESGSALKIADFGLATAYRNK 178 (601)
T ss_pred cCcccccccccccccCCccCCCCcchhhhhhhhccCccccCccc-ccccCCCCCccchhccCCCcccCCCchhhcccccc
Confidence 99999999999883223325667788899999999999999 76 999999999999999999 999999999987655
Q ss_pred C------CcccC-CCCCCCcccccCC-CCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccc--cCCCC
Q 011519 209 G------RSYST-NLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCL--EGQFS 278 (484)
Q Consensus 209 ~------~~~~~-t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 278 (484)
. ....| ++.|+|||...+. ...+..|+||.|+++.-+++|..|+....... .....+..... .....
T Consensus 179 ~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~ 255 (601)
T KOG0590|consen 179 NGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKD---GRYSSWKSNKGRFTQLPW 255 (601)
T ss_pred CCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccc---ccceeecccccccccCcc
Confidence 2 23567 9999999999874 45778999999999999999998764332111 11111111111 11223
Q ss_pred hHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhh
Q 011519 279 SDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQ 314 (484)
Q Consensus 279 ~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~ 314 (484)
...+....+++..++..+|..|.+.+++...-+...
T Consensus 256 ~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 256 NSISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS 291 (601)
T ss_pred ccCChhhhhcccccccCCchhccccccccccccccc
Confidence 445677889999999999999999998887754443
|
|
| >KOG0548 consensus Molecular co-chaperone STI1 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.4e-16 Score=153.96 Aligned_cols=108 Identities=25% Similarity=0.350 Sum_probs=102.7
Q ss_pred hHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHH
Q 011519 374 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQ 453 (484)
Q Consensus 374 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 453 (484)
.+..+...+.+|+.+|+.|+|..|+..|++||+.+|+ ++.+|.|||.||.++|.+..|+.||+++|+++|++.++|.+.
T Consensus 354 ~pe~A~e~r~kGne~Fk~gdy~~Av~~YteAIkr~P~-Da~lYsNRAac~~kL~~~~~aL~Da~~~ieL~p~~~kgy~RK 432 (539)
T KOG0548|consen 354 NPEKAEEEREKGNEAFKKGDYPEAVKHYTEAIKRDPE-DARLYSNRAACYLKLGEYPEALKDAKKCIELDPNFIKAYLRK 432 (539)
T ss_pred ChhHHHHHHHHHHHHHhccCHHHHHHHHHHHHhcCCc-hhHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCchHHHHHHHH
Confidence 3445788888999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHhccccccc
Q 011519 454 AAALFALGKENEAQAALREASILENKKSA 482 (484)
Q Consensus 454 g~~~~~~~~~~~A~~~~~~al~l~~~~~~ 482 (484)
|.++..+.+|++|++.|.+++++||++.+
T Consensus 433 g~al~~mk~ydkAleay~eale~dp~~~e 461 (539)
T KOG0548|consen 433 GAALRAMKEYDKALEAYQEALELDPSNAE 461 (539)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCchhHH
Confidence 99999999999999999999999997653
|
|
| >KOG4234 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.4e-16 Score=133.58 Aligned_cols=108 Identities=17% Similarity=0.241 Sum_probs=101.3
Q ss_pred hHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCC----CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHH
Q 011519 374 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMV----SPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMA 449 (484)
Q Consensus 374 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~----~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a 449 (484)
....+..++..|+.+|+.|+|++|...|..||++.|.. -..+|.|||.|++++++++.||.+|.+||+++|.|-+|
T Consensus 91 ~~~kad~lK~EGN~~F~ngdyeeA~skY~~Ale~cp~~~~e~rsIly~Nraaa~iKl~k~e~aI~dcsKaiel~pty~kA 170 (271)
T KOG4234|consen 91 AIEKADSLKKEGNELFKNGDYEEANSKYQEALESCPSTSTEERSILYSNRAAALIKLRKWESAIEDCSKAIELNPTYEKA 170 (271)
T ss_pred HHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHhCccccHHHHHHHHhhhHHHHHHhhhHHHHHHHHHhhHhcCchhHHH
Confidence 46778899999999999999999999999999999982 23589999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 450 AYLQAAALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 450 ~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
+.+|+.+|-.+.+|++|+.+|++.+++||+..
T Consensus 171 l~RRAeayek~ek~eealeDyKki~E~dPs~~ 202 (271)
T KOG4234|consen 171 LERRAEAYEKMEKYEEALEDYKKILESDPSRR 202 (271)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHhCcchH
Confidence 99999999999999999999999999999764
|
|
| >KOG0548 consensus Molecular co-chaperone STI1 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.63 E-value=8.5e-16 Score=148.50 Aligned_cols=103 Identities=28% Similarity=0.422 Sum_probs=99.5
Q ss_pred hhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 011519 378 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAAL 457 (484)
Q Consensus 378 a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 457 (484)
+..+..+||.++..|+|+.|+..|++||.++|. |+.+|.||+.+|..+|+|++|+.|..+.++++|+++++|.++|.++
T Consensus 2 a~e~k~kgnaa~s~~d~~~ai~~~t~ai~l~p~-nhvlySnrsaa~a~~~~~~~al~da~k~~~l~p~w~kgy~r~Gaa~ 80 (539)
T KOG0548|consen 2 AVELKEKGNAAFSSGDFETAIRLFTEAIMLSPT-NHVLYSNRSAAYASLGSYEKALKDATKTRRLNPDWAKGYSRKGAAL 80 (539)
T ss_pred hhHHHHHHHhhcccccHHHHHHHHHHHHccCCC-ccchhcchHHHHHHHhhHHHHHHHHHHHHhcCCchhhHHHHhHHHH
Confidence 456788999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHHhcccccc
Q 011519 458 FALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 458 ~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
..+|+|++|+..|.+.|+.||++.
T Consensus 81 ~~lg~~~eA~~ay~~GL~~d~~n~ 104 (539)
T KOG0548|consen 81 FGLGDYEEAILAYSEGLEKDPSNK 104 (539)
T ss_pred HhcccHHHHHHHHHHHhhcCCchH
Confidence 999999999999999999998764
|
|
| >PRK15359 type III secretion system chaperone protein SscB; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=4.1e-15 Score=126.35 Aligned_cols=100 Identities=14% Similarity=0.159 Sum_probs=96.7
Q ss_pred hhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHc
Q 011519 381 SKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFAL 460 (484)
Q Consensus 381 ~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~ 460 (484)
+...|..++..|+|++|+..|++++.++|. ++.+|.++|.++..+|++++|+..|.++++++|+++.+++++|.++..+
T Consensus 27 ~~~~g~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~lg~~~~~~g~~~~A~~~y~~Al~l~p~~~~a~~~lg~~l~~~ 105 (144)
T PRK15359 27 VYASGYASWQEGDYSRAVIDFSWLVMAQPW-SWRAHIALAGTWMMLKEYTTAINFYGHALMLDASHPEPVYQTGVCLKMM 105 (144)
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHc
Confidence 567899999999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhcccccc
Q 011519 461 GKENEAQAALREASILENKKS 481 (484)
Q Consensus 461 ~~~~~A~~~~~~al~l~~~~~ 481 (484)
|++++|+..|++|++++|++.
T Consensus 106 g~~~eAi~~~~~Al~~~p~~~ 126 (144)
T PRK15359 106 GEPGLAREAFQTAIKMSYADA 126 (144)
T ss_pred CCHHHHHHHHHHHHHhCCCCh
Confidence 999999999999999998763
|
|
| >KOG0543 consensus FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.61 E-value=4.3e-15 Score=140.12 Aligned_cols=108 Identities=20% Similarity=0.307 Sum_probs=99.3
Q ss_pred hHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCC--------------CCHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 011519 374 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTM--------------VSPTAFARRSLSYLMSDMPQEALNDASQA 439 (484)
Q Consensus 374 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~--------------~~~~~~~~~a~~~~~~~~~~~A~~~~~~a 439 (484)
.+..+...+..|+.+|+.|+|..|+..|++|+..-+. .-..+|+|+|.|++++++|.+|+..|+++
T Consensus 204 ~l~~A~~~ke~Gn~~fK~gk~~~A~~~Yerav~~l~~~~~~~~ee~~~~~~~k~~~~lNlA~c~lKl~~~~~Ai~~c~kv 283 (397)
T KOG0543|consen 204 RLEAADRKKERGNVLFKEGKFKLAKKRYERAVSFLEYRRSFDEEEQKKAEALKLACHLNLAACYLKLKEYKEAIESCNKV 283 (397)
T ss_pred HHHHHHHHHHhhhHHHhhchHHHHHHHHHHHHHHhhccccCCHHHHHHHHHHHHHHhhHHHHHHHhhhhHHHHHHHHHHH
Confidence 6788999999999999999999999999999976432 01247999999999999999999999999
Q ss_pred HhcCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 440 QVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 440 l~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
|+++|+|.+|+|++|.||..+|+|+.|+.+|++|++++|.+.
T Consensus 284 Le~~~~N~KALyRrG~A~l~~~e~~~A~~df~ka~k~~P~Nk 325 (397)
T KOG0543|consen 284 LELDPNNVKALYRRGQALLALGEYDLARDDFQKALKLEPSNK 325 (397)
T ss_pred HhcCCCchhHHHHHHHHHHhhccHHHHHHHHHHHHHhCCCcH
Confidence 999999999999999999999999999999999999999875
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.1e-15 Score=151.26 Aligned_cols=241 Identities=20% Similarity=0.241 Sum_probs=184.3
Q ss_pred cccccCCC--CCCceEEEEEe---CCCcEEEEEEecCC--CCccHHHHHHHHHHHhcC-CCCceeeeeeeeeeCCceEEE
Q 011519 60 NIVSEHGE--KAPNVVYKGKL---ENQFRIAVKRFNRS--AWPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLV 131 (484)
Q Consensus 60 ~~~~~lG~--G~~g~Vy~~~~---~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv 131 (484)
.+.+.+|. |.+|.||.+.. .++..+|+|.-+.. ......+=.+|+....++ .|+|.++.+..+...+..|+-
T Consensus 117 ~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lfiq 196 (524)
T KOG0601|consen 117 PISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILFIQ 196 (524)
T ss_pred ccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcceee
Confidence 45677899 99999999985 45788999984332 222333446778877887 499999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHH----HHHHhhcCCCcccccccccceeecCC-CCceeeccCCcccc
Q 011519 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAE----ALEYCTSKERALYHDLNAYRIVFDDD-VNPRLSCFGLMKNS 206 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~----~L~~lH~~~~ivH~Dlkp~Nill~~~-~~~kl~DfG~a~~~ 206 (484)
+|++ +.+|.++... ....++....+.+..+... ||.++|+. +++|-|+||.||++..+ ...+++|||+...+
T Consensus 197 tE~~-~~sl~~~~~~-~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~-~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i 273 (524)
T KOG0601|consen 197 TELC-GESLQSYCHT-PCNFLPDNLLWNSLRDWLSRDVTALSHLHSN-NIVHDDLKPANIFTTSDWTSCKLTDFGLVSKI 273 (524)
T ss_pred eccc-cchhHHhhhc-ccccCCchhhhhHHhhhhhcccccccccCCC-cccccccchhheecccccceeecCCcceeEEc
Confidence 9999 4689988864 2334777888888888888 99999999 99999999999999998 88999999998876
Q ss_pred CCCC---------cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCC
Q 011519 207 RDGR---------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQF 277 (484)
Q Consensus 207 ~~~~---------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (484)
.... ...|...|++||... +.++..+|+||+|.+..+..++..++.......+ ..+.......++
T Consensus 274 ~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W-----~~~r~~~ip~e~ 347 (524)
T KOG0601|consen 274 SDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGKNSSW-----SQLRQGYIPLEF 347 (524)
T ss_pred cCCccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCCCCCc-----cccccccCchhh
Confidence 6542 124556799999986 6788999999999999999999876543311111 111111122233
Q ss_pred ChHHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 278 SSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 278 ~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
....+..+...+..+++.+|-.|++.+.+.++
T Consensus 348 ~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l 379 (524)
T KOG0601|consen 348 CEGGSSSLRSVTSQMLDEDPRLRLTAQILTAL 379 (524)
T ss_pred hcCcchhhhhHHHHhcCcchhhhhHHHHHhcc
Confidence 34445667779999999999999998877765
|
|
| >KOG4648 consensus Uncharacterized conserved protein, contains LRR repeats [Function unknown] | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.5e-15 Score=138.84 Aligned_cols=107 Identities=23% Similarity=0.346 Sum_probs=102.5
Q ss_pred hHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHH
Q 011519 374 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQ 453 (484)
Q Consensus 374 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 453 (484)
-...+..++.+||.+|++|.|++||.+|+++|.++|. |+..|.|||.+|+++.++..|..||+.|+.+|..|.+||-+|
T Consensus 93 LL~~~SEiKE~GN~yFKQgKy~EAIDCYs~~ia~~P~-NpV~~~NRA~AYlk~K~FA~AE~DC~~AiaLd~~Y~KAYSRR 171 (536)
T KOG4648|consen 93 LLKKASEIKERGNTYFKQGKYEEAIDCYSTAIAVYPH-NPVYHINRALAYLKQKSFAQAEEDCEAAIALDKLYVKAYSRR 171 (536)
T ss_pred HHHhhHHHHHhhhhhhhccchhHHHHHhhhhhccCCC-CccchhhHHHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHH
Confidence 3566677899999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 454 AAALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 454 g~~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
|.+...+|..+||-++++.+|+|+|+.+
T Consensus 172 ~~AR~~Lg~~~EAKkD~E~vL~LEP~~~ 199 (536)
T KOG4648|consen 172 MQARESLGNNMEAKKDCETVLALEPKNI 199 (536)
T ss_pred HHHHHHHhhHHHHHHhHHHHHhhCcccH
Confidence 9999999999999999999999999765
|
|
| >KOG0547 consensus Translocase of outer mitochondrial membrane complex, subunit TOM70/TOM72 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.59 E-value=6.3e-15 Score=140.57 Aligned_cols=104 Identities=27% Similarity=0.351 Sum_probs=97.2
Q ss_pred hhHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHH
Q 011519 373 GQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYL 452 (484)
Q Consensus 373 ~~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~ 452 (484)
+....+..++.+||.+|+.|+|++||.+|++||+++|+ .+..|.||+.||..+|+|++.++++.+|++++|++++|+++
T Consensus 110 ~~~k~A~~lK~~GN~~f~~kkY~eAIkyY~~AI~l~p~-epiFYsNraAcY~~lgd~~~Vied~TkALEl~P~Y~KAl~R 188 (606)
T KOG0547|consen 110 ERLKYAAALKTKGNKFFRNKKYDEAIKYYTQAIELCPD-EPIFYSNRAACYESLGDWEKVIEDCTKALELNPDYVKALLR 188 (606)
T ss_pred HHHHHHHHHHhhhhhhhhcccHHHHHHHHHHHHhcCCC-CchhhhhHHHHHHHHhhHHHHHHHHHHHhhcCcHHHHHHHH
Confidence 34677889999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHhcc
Q 011519 453 QAAALFALGKENEAQAALREASILE 477 (484)
Q Consensus 453 ~g~~~~~~~~~~~A~~~~~~al~l~ 477 (484)
|+.++-++|++++|+.+..-..-++
T Consensus 189 RA~A~E~lg~~~eal~D~tv~ci~~ 213 (606)
T KOG0547|consen 189 RASAHEQLGKFDEALFDVTVLCILE 213 (606)
T ss_pred HHHHHHhhccHHHHHHhhhHHHHhh
Confidence 9999999999999999987544443
|
|
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=99.59 E-value=4.2e-15 Score=149.22 Aligned_cols=140 Identities=18% Similarity=0.113 Sum_probs=98.6
Q ss_pred ccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccH----------------------------------------HHHHH
Q 011519 63 SEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDA----------------------------------------RQFLE 102 (484)
Q Consensus 63 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~----------------------------------------~~~~~ 102 (484)
..||.|++|.||+|++.+|+.||||+.+....... -+|.+
T Consensus 123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~ 202 (437)
T TIGR01982 123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR 202 (437)
T ss_pred cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence 45799999999999998999999999865421100 02445
Q ss_pred HHHHHhcCC----CCceeeeeeeee-eCCceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHH-HHHHhhcCCC
Q 011519 103 EARAVGQLR----NRRLANLLGCCC-EGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAE-ALEYCTSKER 176 (484)
Q Consensus 103 E~~~l~~l~----hpniv~l~~~~~-~~~~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~-~L~~lH~~~~ 176 (484)
|+..+.+++ |.+-+.+-.++. .....+|||||++|++|.++..... ...+ ...++.+++. .+..+|.. |
T Consensus 203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~-~~~~---~~~ia~~~~~~~l~ql~~~-g 277 (437)
T TIGR01982 203 EAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDE-AGLD---RKALAENLARSFLNQVLRD-G 277 (437)
T ss_pred HHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHh-cCCC---HHHHHHHHHHHHHHHHHhC-C
Confidence 666555552 333333333332 2345699999999999998764211 1122 3456666665 46788988 9
Q ss_pred cccccccccceeecCCCCceeeccCCccccC
Q 011519 177 ALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 207 (484)
Q Consensus 177 ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~ 207 (484)
++|+|+||.||+++.+++++|+|||++....
T Consensus 278 ~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 278 FFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred ceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 9999999999999999999999999976543
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >PLN03088 SGT1, suppressor of G2 allele of SKP1; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.4e-14 Score=141.90 Aligned_cols=102 Identities=26% Similarity=0.314 Sum_probs=98.2
Q ss_pred hhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHH
Q 011519 379 LNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALF 458 (484)
Q Consensus 379 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~ 458 (484)
..+..+|+.++..|+|++|+..|++||+++|+ ++.+|+++|.+|+.+|++++|+.++++|++++|+++.+|+++|.+|+
T Consensus 3 ~~l~~~a~~a~~~~~~~~Ai~~~~~Al~~~P~-~~~a~~~~a~~~~~~g~~~eAl~~~~~Al~l~P~~~~a~~~lg~~~~ 81 (356)
T PLN03088 3 KDLEDKAKEAFVDDDFALAVDLYTQAIDLDPN-NAELYADRAQANIKLGNFTEAVADANKAIELDPSLAKAYLRKGTACM 81 (356)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHH
Confidence 45778899999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHHHHhcccccc
Q 011519 459 ALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 459 ~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
.+|+|++|+..|++|++++|++.
T Consensus 82 ~lg~~~eA~~~~~~al~l~P~~~ 104 (356)
T PLN03088 82 KLEEYQTAKAALEKGASLAPGDS 104 (356)
T ss_pred HhCCHHHHHHHHHHHHHhCCCCH
Confidence 99999999999999999998754
|
|
| >PRK15363 pathogenicity island 2 chaperone protein SscA; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=5.9e-14 Score=117.13 Aligned_cols=102 Identities=15% Similarity=0.005 Sum_probs=98.7
Q ss_pred HHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHH
Q 011519 375 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQA 454 (484)
Q Consensus 375 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 454 (484)
.+....++..|..++..|++++|...|+....+||. ++..|+++|.|+..+|+|++||..|.+|+.++|+++.++++.|
T Consensus 32 ~~~l~~lY~~A~~ly~~G~l~~A~~~f~~L~~~Dp~-~~~y~~gLG~~~Q~~g~~~~AI~aY~~A~~L~~ddp~~~~~ag 110 (157)
T PRK15363 32 TQPLNTLYRYAMQLMEVKEFAGAARLFQLLTIYDAW-SFDYWFRLGECCQAQKHWGEAIYAYGRAAQIKIDAPQAPWAAA 110 (157)
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHHH
Confidence 456778899999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHhcc
Q 011519 455 AALFALGKENEAQAALREASILE 477 (484)
Q Consensus 455 ~~~~~~~~~~~A~~~~~~al~l~ 477 (484)
.+++.+|+.++|.+.|+.|+..-
T Consensus 111 ~c~L~lG~~~~A~~aF~~Ai~~~ 133 (157)
T PRK15363 111 ECYLACDNVCYAIKALKAVVRIC 133 (157)
T ss_pred HHHHHcCCHHHHHHHHHHHHHHh
Confidence 99999999999999999999885
|
|
| >KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.51 E-value=4.4e-14 Score=132.42 Aligned_cols=106 Identities=25% Similarity=0.364 Sum_probs=99.5
Q ss_pred hHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCC---CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHH
Q 011519 374 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTM---VSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAA 450 (484)
Q Consensus 374 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~---~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~ 450 (484)
.+.....++..|+.++++|+|.+|.++|+.||.++|+ .++.+|.|||.++.++|+..+||.||+.|++|||.+.+||
T Consensus 245 ~~k~le~~k~~gN~~fk~G~y~~A~E~Yteal~idP~n~~~naklY~nra~v~~rLgrl~eaisdc~~Al~iD~syikal 324 (486)
T KOG0550|consen 245 MPKKLEVKKERGNDAFKNGNYRKAYECYTEALNIDPSNKKTNAKLYGNRALVNIRLGRLREAISDCNEALKIDSSYIKAL 324 (486)
T ss_pred hHHHHHHHHhhhhhHhhccchhHHHHHHHHhhcCCccccchhHHHHHHhHhhhcccCCchhhhhhhhhhhhcCHHHHHHH
Confidence 4667788999999999999999999999999999998 3456899999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhcccc
Q 011519 451 YLQAAALFALGKENEAQAALREASILENK 479 (484)
Q Consensus 451 ~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 479 (484)
.++|.|+..+++|++|+++|++|++++.+
T Consensus 325 l~ra~c~l~le~~e~AV~d~~~a~q~~~s 353 (486)
T KOG0550|consen 325 LRRANCHLALEKWEEAVEDYEKAMQLEKD 353 (486)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 99999999999999999999999998743
|
|
| >PRK11189 lipoprotein NlpI; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=2.3e-13 Score=130.40 Aligned_cols=105 Identities=11% Similarity=0.031 Sum_probs=100.7
Q ss_pred HHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHH
Q 011519 376 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAA 455 (484)
Q Consensus 376 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 455 (484)
..+..+..+|..+.+.|++++|+..|++|++++|+ ++.+|+++|.++..+|++++|+..++++++++|++..+|+++|.
T Consensus 62 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~Al~l~P~-~~~a~~~lg~~~~~~g~~~~A~~~~~~Al~l~P~~~~a~~~lg~ 140 (296)
T PRK11189 62 ERAQLHYERGVLYDSLGLRALARNDFSQALALRPD-MADAYNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAYLNRGI 140 (296)
T ss_pred hhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 44667999999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 456 ALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 456 ~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
+++..|++++|+++|+++++++|++.
T Consensus 141 ~l~~~g~~~eA~~~~~~al~~~P~~~ 166 (296)
T PRK11189 141 ALYYGGRYELAQDDLLAFYQDDPNDP 166 (296)
T ss_pred HHHHCCCHHHHHHHHHHHHHhCCCCH
Confidence 99999999999999999999998763
|
|
| >KOG1266 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.5e-14 Score=132.16 Aligned_cols=198 Identities=18% Similarity=0.202 Sum_probs=140.3
Q ss_pred HHHhcCCCCceeeeeeeeeeC-----CceEEEEecCCCCCHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhcC-CC
Q 011519 105 RAVGQLRNRRLANLLGCCCEG-----DERLLVAEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSK-ER 176 (484)
Q Consensus 105 ~~l~~l~hpniv~l~~~~~~~-----~~~~lv~Ey~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~lH~~-~~ 176 (484)
..|-++-|.|||+++.++.+. ....+++||+..|+|.++|++. ....+......+|+-||+.||.|||+. +.
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Pp 198 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPP 198 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCc
Confidence 345566799999999998754 3478999999999999999742 334577778889999999999999996 56
Q ss_pred cccccccccceeecCCCCceeeccCCcccc--------CCCCcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhC
Q 011519 177 ALYHDLNAYRIVFDDDVNPRLSCFGLMKNS--------RDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSG 248 (484)
Q Consensus 177 ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg 248 (484)
|+|+++..+-|++..+|-+|+.----.... .......+-++|.+||.-...+.+..+|||+||+..++|..+
T Consensus 199 iihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemail 278 (458)
T KOG1266|consen 199 IIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAIL 278 (458)
T ss_pred cccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHh
Confidence 889999999999999988887532111100 011223456889999987767788899999999999999988
Q ss_pred CCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHH
Q 011519 249 KHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 249 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 310 (484)
..-+.........+......+- ......=+.++..|++..|..||+|++++.|.
T Consensus 279 Eiq~tnseS~~~~ee~ia~~i~--------~len~lqr~~i~kcl~~eP~~rp~ar~llfHp 332 (458)
T KOG1266|consen 279 EIQSTNSESKVEVEENIANVII--------GLENGLQRGSITKCLEGEPNGRPDARLLLFHP 332 (458)
T ss_pred eeccCCCcceeehhhhhhhhee--------eccCccccCcCcccccCCCCCCcchhhhhcCc
Confidence 7422111110011111111110 00112234688999999999999999999884
|
|
| >TIGR02552 LcrH_SycD type III secretion low calcium response chaperone LcrH/SycD | Back alignment and domain information |
|---|
Probab=99.50 E-value=3.5e-13 Score=113.60 Aligned_cols=107 Identities=13% Similarity=0.127 Sum_probs=101.8
Q ss_pred hHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHH
Q 011519 374 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQ 453 (484)
Q Consensus 374 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 453 (484)
++.++......|..+++.|++++|++.|++++..+|. ++.++.++|.++..+|++++|+..++++++++|+++..++.+
T Consensus 13 ~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l 91 (135)
T TIGR02552 13 DSEQLEQIYALAYNLYQQGRYDEALKLFQLLAAYDPY-NSRYWLGLAACCQMLKEYEEAIDAYALAAALDPDDPRPYFHA 91 (135)
T ss_pred ChhhHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHH
Confidence 4556677889999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 454 AAALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 454 g~~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
|.+|..+|++++|++.|+++++++|++.
T Consensus 92 a~~~~~~g~~~~A~~~~~~al~~~p~~~ 119 (135)
T TIGR02552 92 AECLLALGEPESALKALDLAIEICGENP 119 (135)
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhccccc
Confidence 9999999999999999999999998765
|
ScyD/LcrH contains three central tetratricopeptide-like repeats that are predicted to fold into an all-alpha-helical array. |
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.2e-14 Score=145.62 Aligned_cols=144 Identities=15% Similarity=0.115 Sum_probs=95.6
Q ss_pred CCcccccccCCCCCCceEEEEEeCC-CcEEEEEEecCCCCc---------------------------------c-HH--
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKLEN-QFRIAVKRFNRSAWP---------------------------------D-AR-- 98 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~---------------------------------~-~~-- 98 (484)
|..++. ..+|.|++|.||+|++.+ |+.||||+++..-.. . .+
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 555555 678999999999999766 999999999754210 0 01
Q ss_pred ----HHHHHHHHHhcCC----CCceeeeeeeeee-CCceEEEEecCCCCCHHhhhccCCCC----CCCHHHHHHHHHHHH
Q 011519 99 ----QFLEEARAVGQLR----NRRLANLLGCCCE-GDERLLVAEYMPNDTLAKHLFHWETQ----PMKWAMRLRVALHIA 165 (484)
Q Consensus 99 ----~~~~E~~~l~~l~----hpniv~l~~~~~~-~~~~~lv~Ey~~~gsL~~~l~~~~~~----~l~~~~~~~i~~qi~ 165 (484)
+|.+|+..+.+++ +.+.+.+-.++.+ ....+|||||++|++|.++-.-...+ .+....+..++.|+.
T Consensus 198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif 277 (537)
T PRK04750 198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVF 277 (537)
T ss_pred HHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 2444555554442 3333443333332 34568999999999998742111111 233444445555554
Q ss_pred HHHHHhhcCCCcccccccccceeecCCC----CceeeccCCccccCC
Q 011519 166 EALEYCTSKERALYHDLNAYRIVFDDDV----NPRLSCFGLMKNSRD 208 (484)
Q Consensus 166 ~~L~~lH~~~~ivH~Dlkp~Nill~~~~----~~kl~DfG~a~~~~~ 208 (484)
.. |++|+|+||.||+++.++ .++++|||++.....
T Consensus 278 -------~~-GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 278 -------RD-GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred -------hC-CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 35 999999999999999888 999999999876543
|
|
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.7e-13 Score=120.49 Aligned_cols=128 Identities=15% Similarity=0.053 Sum_probs=96.0
Q ss_pred cccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCce-eeeeeeeeeCCceEEEEecCCCCCH
Q 011519 62 VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRL-ANLLGCCCEGDERLLVAEYMPNDTL 140 (484)
Q Consensus 62 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpni-v~l~~~~~~~~~~~lv~Ey~~~gsL 140 (484)
++.++.|.++.||++... +..|++|....... ....+.+|+.++..+.+.++ .+++.+.. ...++||||++|.++
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~G~~l 78 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIEGSEL 78 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecCCCcc
Confidence 356789999999999875 66899999765432 22346789999998865443 44554432 345899999999887
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC-----cccccccccceeecCCCCceeeccCCccc
Q 011519 141 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKER-----ALYHDLNAYRIVFDDDVNPRLSCFGLMKN 205 (484)
Q Consensus 141 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~-----ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 205 (484)
...- . ....++.+++.+|..||+. + ++|+|++|.||+++ ++.++++|||.+..
T Consensus 79 ~~~~-------~---~~~~~~~~l~~~l~~LH~~-~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 79 LTED-------F---SDPENLEKIAKLLKKLHSS-PLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred cccc-------c---cCHHHHHHHHHHHHHHhCC-CCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 6431 1 1134567999999999997 6 49999999999999 67899999998653
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.47 E-value=6.4e-14 Score=138.77 Aligned_cols=243 Identities=16% Similarity=0.120 Sum_probs=181.5
Q ss_pred cccccccCCCCCCceEEEEEe--CCCcEEEEEEecCCCCccHHH--HHHHHHHHhcC-CCCceeeeeeeeeeCCceEEEE
Q 011519 58 MENIVSEHGEKAPNVVYKGKL--ENQFRIAVKRFNRSAWPDARQ--FLEEARAVGQL-RNRRLANLLGCCCEGDERLLVA 132 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~--~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~ 132 (484)
+...+..||.|.|+.|+.... .++..|++|.+.........+ -+.|+.+...+ .|.+++.....|....+.+|-.
T Consensus 266 df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~ 345 (524)
T KOG0601|consen 266 DFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPL 345 (524)
T ss_pred CcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCch
Confidence 456678889999999999883 568899999987665444322 35788888777 5999999999998888889999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCC-CCceeeccCCccccCCCC-
Q 011519 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD-VNPRLSCFGLMKNSRDGR- 210 (484)
Q Consensus 133 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~-~~~kl~DfG~a~~~~~~~- 210 (484)
|||.++++...+. -...+++...+++..|++.++.++|+. .++|+|+||+||++..+ +.-++.|||.........
T Consensus 346 e~~~~~s~~l~~~--~~~~~d~~~~~~~~~q~~~~l~~i~s~-~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~~~ 422 (524)
T KOG0601|consen 346 EFCEGGSSSLRSV--TSQMLDEDPRLRLTAQILTALNVIHSK-LFVHLDVKPSNILISNDGFFSKLGDFGCWTRLAFSSG 422 (524)
T ss_pred hhhcCcchhhhhH--HHHhcCcchhhhhHHHHHhccccccch-hhhcccccccceeeccchhhhhccccccccccceecc
Confidence 9999999887763 445678889999999999999999999 99999999999999875 788999999986533222
Q ss_pred cccC-CCCC-CCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHH
Q 011519 211 SYST-NLAF-TPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288 (484)
Q Consensus 211 ~~~~-t~~y-~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 288 (484)
...+ +..| .++.......+..+.|++|||..+.+.+++....+.. . ....+...... ..+ .....+..+
T Consensus 423 ~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~-~------~~~~i~~~~~p-~~~-~~~~~~q~~ 493 (524)
T KOG0601|consen 423 VFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESG-V------QSLTIRSGDTP-NLP-GLKLQLQVL 493 (524)
T ss_pred cccccccccccchhhccccccccccccccccccccccccCcccCccc-c------cceeeeccccc-CCC-chHHhhhhh
Confidence 2222 3334 3555555566888999999999999999998533221 1 11111111111 112 223678888
Q ss_pred HHHHhccCCCCCCChHHHHHHHHh
Q 011519 289 ASRCLQYEPRERPNPRSLVTALVT 312 (484)
Q Consensus 289 i~~cl~~dp~~Rps~~~il~~l~~ 312 (484)
...++..++..||++.++..+...
T Consensus 494 ~kv~~~~~~~~~~l~~~l~~~~~~ 517 (524)
T KOG0601|consen 494 LKVMINPDRKRRPSAVELSLHSEF 517 (524)
T ss_pred hhhhcCCccccchhhhhhcccchh
Confidence 999999999999999888776543
|
|
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.45 E-value=7.7e-13 Score=132.39 Aligned_cols=170 Identities=15% Similarity=0.157 Sum_probs=132.6
Q ss_pred EE-EEE-eCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCCCCCHHhhhccCCCC
Q 011519 73 VY-KGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQ 150 (484)
Q Consensus 73 Vy-~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~ 150 (484)
|| .|. ..++.+|.|...+...........+-++.|+.++||||+++++.+...+..|||+|-+. -|..++..
T Consensus 27 ~~~~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~---- 100 (690)
T KOG1243|consen 27 LWPDGTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKE---- 100 (690)
T ss_pred cccccceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHH----
Confidence 44 344 56788999999887664334556778889999999999999999999999999999984 47777753
Q ss_pred CCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCCc----ccCCCCCCCcccccC
Q 011519 151 PMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRS----YSTNLAFTPPEYLRT 226 (484)
Q Consensus 151 ~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~----~~~t~~y~aPE~~~~ 226 (484)
+......-.+.||+.||.|||+..+++|++|.-..|+++..|..||++|-++........ ...-..|..|+.+..
T Consensus 101 -l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~ 179 (690)
T KOG1243|consen 101 -LGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDP 179 (690)
T ss_pred -hHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcCc
Confidence 346677778899999999999877999999999999999999999999988765443321 111234666665542
Q ss_pred CCCCCCCceeehHHHHHHHhhCCCC
Q 011519 227 GRVTPESVMYSFGTLLLDLLSGKHI 251 (484)
Q Consensus 227 ~~~~~~~Dv~slG~~l~el~tg~~p 251 (484)
. +-..|.|.||++++|++.|..+
T Consensus 180 s--~~s~D~~~Lg~li~el~ng~~~ 202 (690)
T KOG1243|consen 180 S--EWSIDSWGLGCLIEELFNGSLL 202 (690)
T ss_pred c--ccchhhhhHHHHHHHHhCcccC
Confidence 2 1456999999999999999433
|
|
| >PRK10370 formate-dependent nitrite reductase complex subunit NrfG; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.1e-12 Score=117.59 Aligned_cols=109 Identities=12% Similarity=0.097 Sum_probs=101.5
Q ss_pred hhhHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHH-HhcCC--HHHHHHHHHHHHhcCCCChH
Q 011519 372 TGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSY-LMSDM--PQEALNDASQAQVISPVWHM 448 (484)
Q Consensus 372 ~~~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~-~~~~~--~~~A~~~~~~al~~~p~~~~ 448 (484)
..++.++..|...|..+...|++++|+..|++|++++|+ ++.++.++|.++ ...|+ +++|+..++++++++|+++.
T Consensus 67 ~~~P~~~~~w~~Lg~~~~~~g~~~~A~~a~~~Al~l~P~-~~~~~~~lA~aL~~~~g~~~~~~A~~~l~~al~~dP~~~~ 145 (198)
T PRK10370 67 RANPQNSEQWALLGEYYLWRNDYDNALLAYRQALQLRGE-NAELYAALATVLYYQAGQHMTPQTREMIDKALALDANEVT 145 (198)
T ss_pred HHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHhCCCChh
Confidence 335677889999999999999999999999999999999 999999999985 67788 59999999999999999999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 449 AAYLQAAALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 449 a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
+++.+|.++..+|++++|+..|+++++++|.+.
T Consensus 146 al~~LA~~~~~~g~~~~Ai~~~~~aL~l~~~~~ 178 (198)
T PRK10370 146 ALMLLASDAFMQADYAQAIELWQKVLDLNSPRV 178 (198)
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCc
Confidence 999999999999999999999999999997654
|
|
| >KOG0551 consensus Hsp90 co-chaperone CNS1 (contains TPR repeats) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.45 E-value=3.4e-13 Score=123.23 Aligned_cols=119 Identities=24% Similarity=0.320 Sum_probs=104.6
Q ss_pred HHHHhCCcCchhhHhhhhhhhHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhc---CCCCCHHHHHHHHHHHHhcCCHH
Q 011519 354 ILEKLGYKDDEGAATEMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDV---GTMVSPTAFARRSLSYLMSDMPQ 430 (484)
Q Consensus 354 ~l~~~~y~~~~~~a~e~~~~~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~---~p~~~~~~~~~~a~~~~~~~~~~ 430 (484)
.|+++.|...+.+.. ..|..++..||.+|+.++|..|+.+|+++|+. ||+.++.+|.|||.|.+.+|+|.
T Consensus 64 ~LqslK~da~E~ep~-------E~Aen~KeeGN~~fK~Kryk~A~~~Yt~Glk~kc~D~dlnavLY~NRAAa~~~l~NyR 136 (390)
T KOG0551|consen 64 CLQSLKADAEEGEPH-------EQAENYKEEGNEYFKEKRYKDAVESYTEGLKKKCADPDLNAVLYTNRAAAQLYLGNYR 136 (390)
T ss_pred HHHHhhhccccCChH-------HHHHHHHHHhHHHHHhhhHHHHHHHHHHHHhhcCCCccHHHHHHhhHHHHHHHHHHHH
Confidence 466666654444422 36788999999999999999999999999976 66778889999999999999999
Q ss_pred HHHHHHHHHHhcCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccc
Q 011519 431 EALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENK 479 (484)
Q Consensus 431 ~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 479 (484)
.||+||.+|+.++|++.+|||+-+.|++.+.++.+|+...+..+.++.+
T Consensus 137 s~l~Dcs~al~~~P~h~Ka~~R~Akc~~eLe~~~~a~nw~ee~~~~d~e 185 (390)
T KOG0551|consen 137 SALNDCSAALKLKPTHLKAYIRGAKCLLELERFAEAVNWCEEGLQIDDE 185 (390)
T ss_pred HHHHHHHHHHhcCcchhhhhhhhhHHHHHHHHHHHHHHHHhhhhhhhHH
Confidence 9999999999999999999999999999999999999999988877654
|
|
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=99.43 E-value=2.4e-12 Score=113.75 Aligned_cols=138 Identities=10% Similarity=0.110 Sum_probs=100.5
Q ss_pred cccCCCCCCceEEEEEeCC-------CcEEEEEEecCCCC---------------------cc-HHHHH----HHHHHHh
Q 011519 62 VSEHGEKAPNVVYKGKLEN-------QFRIAVKRFNRSAW---------------------PD-ARQFL----EEARAVG 108 (484)
Q Consensus 62 ~~~lG~G~~g~Vy~~~~~~-------~~~vavK~~~~~~~---------------------~~-~~~~~----~E~~~l~ 108 (484)
.+.||.|--+.||.|...+ +..+|||+.+.... .. .+.+. +|+..|.
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 3677999999999998442 47899998743210 01 11233 7999999
Q ss_pred cCC--CCceeeeeeeeeeCCceEEEEecCCCCCHHh-hhccCCCCCCCHHHHHHHHHHHHHHHHHh-hcCCCcccccccc
Q 011519 109 QLR--NRRLANLLGCCCEGDERLLVAEYMPNDTLAK-HLFHWETQPMKWAMRLRVALHIAEALEYC-TSKERALYHDLNA 184 (484)
Q Consensus 109 ~l~--hpniv~l~~~~~~~~~~~lv~Ey~~~gsL~~-~l~~~~~~~l~~~~~~~i~~qi~~~L~~l-H~~~~ivH~Dlkp 184 (484)
++. .-+++..+++ ..-+|||||+.++.+.. .+. ...++......+..+++.+|..| |.. |+||+||++
T Consensus 82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lk---d~~~~~~~~~~i~~~i~~~l~~l~H~~-glVHGDLs~ 153 (197)
T cd05146 82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLK---DAKLNDEEMKNAYYQVLSMMKQLYKEC-NLVHADLSE 153 (197)
T ss_pred HHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhh---ccccCHHHHHHHHHHHHHHHHHHHHhC-CeecCCCCH
Confidence 985 3466677765 34589999997654422 222 22355566778889999999999 777 999999999
Q ss_pred cceeecCCCCceeeccCCccccCC
Q 011519 185 YRIVFDDDVNPRLSCFGLMKNSRD 208 (484)
Q Consensus 185 ~Nill~~~~~~kl~DfG~a~~~~~ 208 (484)
.|||++ ++.+.|+|||.+.....
T Consensus 154 ~NIL~~-~~~v~iIDF~qav~~~h 176 (197)
T cd05146 154 YNMLWH-DGKVWFIDVSQSVEPTH 176 (197)
T ss_pred HHEEEE-CCcEEEEECCCceeCCC
Confidence 999997 57899999998776543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >KOG0545 consensus Aryl-hydrocarbon receptor-interacting protein [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.43 E-value=9.1e-13 Score=115.42 Aligned_cols=106 Identities=19% Similarity=0.150 Sum_probs=96.4
Q ss_pred hHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHh--------cCCC---------CCHHHHHHHHHHHHhcCCHHHHHHHH
Q 011519 374 QMQETLNSKKKGDVAFRHKDFRASIECYTQFID--------VGTM---------VSPTAFARRSLSYLMSDMPQEALNDA 436 (484)
Q Consensus 374 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~--------~~p~---------~~~~~~~~~a~~~~~~~~~~~A~~~~ 436 (484)
.+.....+.++||.+|+.|+|.+|+..|..||. -.|. ....++.|.+.|++..|+|-++++.+
T Consensus 174 Kmkav~~l~q~GN~lfk~~~ykEA~~~YreAi~~l~~L~lkEkP~e~eW~eLdk~~tpLllNy~QC~L~~~e~yevleh~ 253 (329)
T KOG0545|consen 174 KMKAVPVLHQEGNRLFKLGRYKEASSKYREAIICLRNLQLKEKPGEPEWLELDKMITPLLLNYCQCLLKKEEYYEVLEHC 253 (329)
T ss_pred hhhhhHHHHHhhhhhhhhccHHHHHHHHHHHHHHHHHHHhccCCCChHHHHHHHhhhHHHHhHHHHHhhHHHHHHHHHHH
Confidence 467778899999999999999999999999983 2343 03458999999999999999999999
Q ss_pred HHHHhcCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccc
Q 011519 437 SQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENK 479 (484)
Q Consensus 437 ~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 479 (484)
+..+..+|++.+|||+||.|+....+..+|.++|.++|+++|.
T Consensus 254 seiL~~~~~nvKA~frRakAhaa~Wn~~eA~~D~~~vL~ldps 296 (329)
T KOG0545|consen 254 SEILRHHPGNVKAYFRRAKAHAAVWNEAEAKADLQKVLELDPS 296 (329)
T ss_pred HHHHhcCCchHHHHHHHHHHHHhhcCHHHHHHHHHHHHhcChh
Confidence 9999999999999999999999999999999999999999985
|
|
| >KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.42 E-value=7.4e-13 Score=129.79 Aligned_cols=106 Identities=16% Similarity=0.138 Sum_probs=101.4
Q ss_pred HHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHH
Q 011519 375 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQA 454 (484)
Q Consensus 375 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 454 (484)
+.-+....+.|..+-++|++++|+.+|++||.+.|. .+++|.|+|.+|-.+|+.++|+..+.+||.++|.+++||.++|
T Consensus 385 p~~aaa~nNLa~i~kqqgnl~~Ai~~YkealrI~P~-fAda~~NmGnt~ke~g~v~~A~q~y~rAI~~nPt~AeAhsNLa 463 (966)
T KOG4626|consen 385 PEFAAAHNNLASIYKQQGNLDDAIMCYKEALRIKPT-FADALSNMGNTYKEMGDVSAAIQCYTRAIQINPTFAEAHSNLA 463 (966)
T ss_pred hhhhhhhhhHHHHHHhcccHHHHHHHHHHHHhcCch-HHHHHHhcchHHHHhhhHHHHHHHHHHHHhcCcHHHHHHhhHH
Confidence 556778889999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 455 AALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 455 ~~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
.+|.-.|+..+|+..|+.||+|+|+-.
T Consensus 464 si~kDsGni~~AI~sY~~aLklkPDfp 490 (966)
T KOG4626|consen 464 SIYKDSGNIPEAIQSYRTALKLKPDFP 490 (966)
T ss_pred HHhhccCCcHHHHHHHHHHHccCCCCc
Confidence 999999999999999999999998754
|
|
| >KOG4555 consensus TPR repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.39 E-value=6.2e-12 Score=99.48 Aligned_cols=104 Identities=17% Similarity=0.201 Sum_probs=96.7
Q ss_pred hHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCh----HH
Q 011519 374 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWH----MA 449 (484)
Q Consensus 374 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~----~a 449 (484)
.+.....+..+|..+...|+++.|++.|.+||.+.|. .+.+|+|||.++.-+|+.++|++|+++|+++.-+.. ++
T Consensus 39 ~~e~S~~LEl~~valaE~g~Ld~AlE~F~qal~l~P~-raSayNNRAQa~RLq~~~e~ALdDLn~AleLag~~trtacqa 117 (175)
T KOG4555|consen 39 AIKASRELELKAIALAEAGDLDGALELFGQALCLAPE-RASAYNNRAQALRLQGDDEEALDDLNKALELAGDQTRTACQA 117 (175)
T ss_pred HHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHhccc-chHhhccHHHHHHHcCChHHHHHHHHHHHHhcCccchHHHHH
Confidence 4666777888999999999999999999999999999 999999999999999999999999999999986554 78
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhccc
Q 011519 450 AYLQAAALFALGKENEAQAALREASILEN 478 (484)
Q Consensus 450 ~~~~g~~~~~~~~~~~A~~~~~~al~l~~ 478 (484)
|..+|.+|..+|+.+.|..+|..|.+|..
T Consensus 118 ~vQRg~lyRl~g~dd~AR~DFe~AA~LGS 146 (175)
T KOG4555|consen 118 FVQRGLLYRLLGNDDAARADFEAAAQLGS 146 (175)
T ss_pred HHHHHHHHHHhCchHHHHHhHHHHHHhCC
Confidence 99999999999999999999999999874
|
|
| >KOG4642 consensus Chaperone-dependent E3 ubiquitin protein ligase (contains TPR repeats) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.39 E-value=8.2e-13 Score=115.40 Aligned_cols=100 Identities=22% Similarity=0.305 Sum_probs=95.5
Q ss_pred HHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHH
Q 011519 376 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAA 455 (484)
Q Consensus 376 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 455 (484)
..+..+..+|+.++..++|..||.+|.+||.++|. .+.+|.|||.||+++.+++.+..|+.+|++++|+.++++|.+|.
T Consensus 8 ~~a~qlkE~gnk~f~~k~y~~ai~~y~raI~~nP~-~~~Y~tnralchlk~~~~~~v~~dcrralql~~N~vk~h~flg~ 86 (284)
T KOG4642|consen 8 ESAEQLKEQGNKCFIPKRYDDAIDCYSRAICINPT-VASYYTNRALCHLKLKHWEPVEEDCRRALQLDPNLVKAHYFLGQ 86 (284)
T ss_pred hHHHHHHhccccccchhhhchHHHHHHHHHhcCCC-cchhhhhHHHHHHHhhhhhhhhhhHHHHHhcChHHHHHHHHHHH
Confidence 34567888999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHhc
Q 011519 456 ALFALGKENEAQAALREASIL 476 (484)
Q Consensus 456 ~~~~~~~~~~A~~~~~~al~l 476 (484)
++.+...|++|++.+.+|..+
T Consensus 87 ~~l~s~~~~eaI~~Lqra~sl 107 (284)
T KOG4642|consen 87 WLLQSKGYDEAIKVLQRAYSL 107 (284)
T ss_pred HHHhhccccHHHHHHHHHHHH
Confidence 999999999999999999765
|
|
| >TIGR00990 3a0801s09 mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70) | Back alignment and domain information |
|---|
Probab=99.38 E-value=4.4e-12 Score=134.51 Aligned_cols=102 Identities=25% Similarity=0.342 Sum_probs=96.0
Q ss_pred HHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHH
Q 011519 375 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQA 454 (484)
Q Consensus 375 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 454 (484)
...+..++..|+.+++.|+|++|+..|+++|++.|+ +..|.|+|.||.++|+|++|+.+|++|++++|++.++|+++|
T Consensus 124 ~~~a~~~k~~G~~~~~~~~~~~Ai~~y~~al~~~p~--~~~~~n~a~~~~~l~~~~~Ai~~~~~al~l~p~~~~a~~~~a 201 (615)
T TIGR00990 124 KKYAAKLKEKGNKAYRNKDFNKAIKLYSKAIECKPD--PVYYSNRAACHNALGDWEKVVEDTTAALELDPDYSKALNRRA 201 (615)
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc--hHHHHHHHHHHHHhCCHHHHHHHHHHHHHcCCCCHHHHHHHH
Confidence 355778999999999999999999999999999997 568999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHhccc
Q 011519 455 AALFALGKENEAQAALREASILEN 478 (484)
Q Consensus 455 ~~~~~~~~~~~A~~~~~~al~l~~ 478 (484)
.+|..+|++++|+.+|..++.+++
T Consensus 202 ~a~~~lg~~~eA~~~~~~~~~~~~ 225 (615)
T TIGR00990 202 NAYDGLGKYADALLDLTASCIIDG 225 (615)
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCC
Confidence 999999999999999988877664
|
|
| >PF13414 TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2PL2_B 3IEG_B 2FBN_A | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.9e-12 Score=95.21 Aligned_cols=67 Identities=22% Similarity=0.195 Sum_probs=57.8
Q ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHcC-CHHHHHHHHHHHHhccc
Q 011519 412 SPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALG-KENEAQAALREASILEN 478 (484)
Q Consensus 412 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~-~~~~A~~~~~~al~l~~ 478 (484)
++..|.++|.+++..|+|++|+..|++|++++|+++.+|+++|.+|..+| ++++|+++|++|++++|
T Consensus 2 ~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~g~~~~~~~~~~~~A~~~~~~al~l~P 69 (69)
T PF13414_consen 2 NAEAWYNLGQIYFQQGDYEEAIEYFEKAIELDPNNAEAYYNLGLAYMKLGKDYEEAIEDFEKALKLDP 69 (69)
T ss_dssp SHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCccHHHHHHHHHHHHHcCc
Confidence 56788888888888888888888888888888888888888888888888 68888888888888887
|
... |
| >KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.35 E-value=3.1e-12 Score=117.32 Aligned_cols=106 Identities=17% Similarity=0.218 Sum_probs=101.8
Q ss_pred HHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHH
Q 011519 375 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQA 454 (484)
Q Consensus 375 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 454 (484)
+.++......|+.++..|+|.+|+..|-.||+.||+ +..+++.||.+|+.+|+-.-|+.|++++|++.|+...|-..||
T Consensus 35 ~advekhlElGk~lla~~Q~sDALt~yHaAve~dp~-~Y~aifrRaT~yLAmGksk~al~Dl~rVlelKpDF~~ARiQRg 113 (504)
T KOG0624|consen 35 PADVEKHLELGKELLARGQLSDALTHYHAAVEGDPN-NYQAIFRRATVYLAMGKSKAALQDLSRVLELKPDFMAARIQRG 113 (504)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHcCCch-hHHHHHHHHHHHhhhcCCccchhhHHHHHhcCccHHHHHHHhc
Confidence 567788899999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 455 AALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 455 ~~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
.+++.+|++++|+++|+..|.-+|.+.
T Consensus 114 ~vllK~Gele~A~~DF~~vl~~~~s~~ 140 (504)
T KOG0624|consen 114 VVLLKQGELEQAEADFDQVLQHEPSNG 140 (504)
T ss_pred hhhhhcccHHHHHHHHHHHHhcCCCcc
Confidence 999999999999999999999998654
|
|
| >KOG1125 consensus TPR repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.6e-11 Score=120.15 Aligned_cols=105 Identities=17% Similarity=0.213 Sum_probs=98.3
Q ss_pred HHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHH
Q 011519 376 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAA 455 (484)
Q Consensus 376 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 455 (484)
.++....-.|..++-.|+|+.|+.+|+.||..+|+ +..+|+.+|.++..-.+.++||..|.+|+++.|++..+.|++|+
T Consensus 428 ~DpdvQ~~LGVLy~ls~efdraiDcf~~AL~v~Pn-d~~lWNRLGAtLAN~~~s~EAIsAY~rALqLqP~yVR~RyNlgI 506 (579)
T KOG1125|consen 428 IDPDVQSGLGVLYNLSGEFDRAVDCFEAALQVKPN-DYLLWNRLGATLANGNRSEEAISAYNRALQLQPGYVRVRYNLGI 506 (579)
T ss_pred CChhHHhhhHHHHhcchHHHHHHHHHHHHHhcCCc-hHHHHHHhhHHhcCCcccHHHHHHHHHHHhcCCCeeeeehhhhh
Confidence 34455567899999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 456 ALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 456 ~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
.++.+|.|+||+++|-.||.+..+..
T Consensus 507 S~mNlG~ykEA~~hlL~AL~mq~ks~ 532 (579)
T KOG1125|consen 507 SCMNLGAYKEAVKHLLEALSMQRKSR 532 (579)
T ss_pred hhhhhhhHHHHHHHHHHHHHhhhccc
Confidence 99999999999999999999987643
|
|
| >KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.34 E-value=6.3e-13 Score=127.89 Aligned_cols=104 Identities=24% Similarity=0.324 Sum_probs=99.4
Q ss_pred HhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHH
Q 011519 377 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAA 456 (484)
Q Consensus 377 ~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 456 (484)
.+..+..+++.+++.+.|+.|+..|.|||+++|+ ++.+|.||+.++++.++|..|+.|+.+||+++|.+.++|+++|.+
T Consensus 3 ~a~e~k~ean~~l~~~~fd~avdlysKaI~ldpn-ca~~~anRa~a~lK~e~~~~Al~Da~kaie~dP~~~K~Y~rrg~a 81 (476)
T KOG0376|consen 3 SAEELKNEANEALKDKVFDVAVDLYSKAIELDPN-CAIYFANRALAHLKVESFGGALHDALKAIELDPTYIKAYVRRGTA 81 (476)
T ss_pred hhhhhhhHHhhhcccchHHHHHHHHHHHHhcCCc-ceeeechhhhhheeechhhhHHHHHHhhhhcCchhhheeeeccHH
Confidence 3566788999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHHhcccccc
Q 011519 457 LFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 457 ~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
.+.++++.+|..+|+++..+.|.+.
T Consensus 82 ~m~l~~~~~A~~~l~~~~~l~Pnd~ 106 (476)
T KOG0376|consen 82 VMALGEFKKALLDLEKVKKLAPNDP 106 (476)
T ss_pred HHhHHHHHHHHHHHHHhhhcCcCcH
Confidence 9999999999999999999988654
|
|
| >cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins | Back alignment and domain information |
|---|
Probab=99.33 E-value=1e-11 Score=114.13 Aligned_cols=140 Identities=17% Similarity=0.176 Sum_probs=109.3
Q ss_pred ccCCCCCCceEEEEEeCCCcEEEEEEecCCCC-ccHHHHHHHHHHHhcCCC--CceeeeeeeeeeC---CceEEEEecCC
Q 011519 63 SEHGEKAPNVVYKGKLENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRN--RRLANLLGCCCEG---DERLLVAEYMP 136 (484)
Q Consensus 63 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h--pniv~l~~~~~~~---~~~~lv~Ey~~ 136 (484)
+.+|.|.++.||++...+|..++||+...... .....+.+|+.++..+.+ .++.+++.+.... +..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 45699999999999976778899999865432 134568899999999975 3467777776653 35689999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcC------------------------------------------
Q 011519 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK------------------------------------------ 174 (484)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~------------------------------------------ 174 (484)
|.+|.+.+. ...++......++.+++.+|..||+.
T Consensus 84 G~~l~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (223)
T cd05154 84 GRVLRDRLL---RPELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERL 160 (223)
T ss_pred CEecCCCCC---CCCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHH
Confidence 998887653 13577778888888888888888842
Q ss_pred -------------CCcccccccccceeecC--CCCceeeccCCccc
Q 011519 175 -------------ERALYHDLNAYRIVFDD--DVNPRLSCFGLMKN 205 (484)
Q Consensus 175 -------------~~ivH~Dlkp~Nill~~--~~~~kl~DfG~a~~ 205 (484)
..++|+|++|.||+++. ++.+.|+||+.+..
T Consensus 161 ~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 161 LRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 24689999999999998 56689999987654
|
This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain |
| >KOG1308 consensus Hsp70-interacting protein Hip/Transient component of progesterone receptor complexes and an Hsp70-binding protein [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.32 E-value=5.6e-13 Score=122.55 Aligned_cols=114 Identities=23% Similarity=0.271 Sum_probs=106.9
Q ss_pred hhhhhhHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChH
Q 011519 369 EMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHM 448 (484)
Q Consensus 369 e~~~~~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~ 448 (484)
+.+...+..+...+-++..++..|.++.||+.|+.||+++|. .+.+|.+|+.++++++++..|+.||+.|++++|+.++
T Consensus 105 e~Tee~~eqa~e~k~~A~eAln~G~~~~ai~~~t~ai~lnp~-~a~l~~kr~sv~lkl~kp~~airD~d~A~ein~Dsa~ 183 (377)
T KOG1308|consen 105 EITEEMMDQANDKKVQASEALNDGEFDTAIELFTSAIELNPP-LAILYAKRASVFLKLKKPNAAIRDCDFAIEINPDSAK 183 (377)
T ss_pred hhhHHHHHHHHHHHHHHHHHhcCcchhhhhcccccccccCCc-hhhhcccccceeeeccCCchhhhhhhhhhccCccccc
Confidence 344556788889999999999999999999999999999999 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcccccccC
Q 011519 449 AAYLQAAALFALGKENEAQAALREASILENKKSAN 483 (484)
Q Consensus 449 a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~~~ 483 (484)
.|-.+|.+...+|+|++|..+|+.|+++|.++..+
T Consensus 184 ~ykfrg~A~rllg~~e~aa~dl~~a~kld~dE~~~ 218 (377)
T KOG1308|consen 184 GYKFRGYAERLLGNWEEAAHDLALACKLDYDEANS 218 (377)
T ss_pred ccchhhHHHHHhhchHHHHHHHHHHHhccccHHHH
Confidence 99999999999999999999999999999776543
|
|
| >KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.32 E-value=8.3e-12 Score=122.56 Aligned_cols=129 Identities=12% Similarity=0.067 Sum_probs=110.4
Q ss_pred HHHHHHHHhCCcCch-hhHhhhhhhhHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCC
Q 011519 350 AIHEILEKLGYKDDE-GAATEMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDM 428 (484)
Q Consensus 350 ~~~e~l~~~~y~~~~-~~a~e~~~~~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~ 428 (484)
.+.-.|+++|--.+. .=++....-.+..+....+.|+.+.++|.+++|+..|.+|++..|. .+.+++|+|.+|.++|+
T Consensus 325 NlanALkd~G~V~ea~~cYnkaL~l~p~hadam~NLgni~~E~~~~e~A~~ly~~al~v~p~-~aaa~nNLa~i~kqqgn 403 (966)
T KOG4626|consen 325 NLANALKDKGSVTEAVDCYNKALRLCPNHADAMNNLGNIYREQGKIEEATRLYLKALEVFPE-FAAAHNNLASIYKQQGN 403 (966)
T ss_pred HHHHHHHhccchHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhccchHHHHHHHHHHhhChh-hhhhhhhHHHHHHhccc
Confidence 445556666533322 2222333335678889999999999999999999999999999999 99999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccc
Q 011519 429 PQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENK 479 (484)
Q Consensus 429 ~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 479 (484)
+++|+..|..||.++|..++||.++|+.|-.+|+..+|++.|.+|+.++|.
T Consensus 404 l~~Ai~~YkealrI~P~fAda~~NmGnt~ke~g~v~~A~q~y~rAI~~nPt 454 (966)
T KOG4626|consen 404 LDDAIMCYKEALRIKPTFADALSNMGNTYKEMGDVSAAIQCYTRAIQINPT 454 (966)
T ss_pred HHHHHHHHHHHHhcCchHHHHHHhcchHHHHhhhHHHHHHHHHHHHhcCcH
Confidence 999999999999999999999999999999999999999999999999873
|
|
| >COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.9e-11 Score=104.21 Aligned_cols=131 Identities=18% Similarity=0.172 Sum_probs=98.1
Q ss_pred cCCCCCCceEEEEEeCCCcEEEEEEecCCCCcc--------HHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecC
Q 011519 64 EHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD--------ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 64 ~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--------~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~ 135 (484)
.+++|+-+.+|.+.+- |.++++|.=....... .++-.+|+.++.+++--.|..-.=+..+.+...|+|||+
T Consensus 3 ~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I 81 (204)
T COG3642 3 LIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYI 81 (204)
T ss_pred hhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEe
Confidence 3588999999999763 3357777543332221 234678999999987555444444455777889999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCcccc
Q 011519 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 206 (484)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~ 206 (484)
+|..|.+.+... ...++..+-.-+.-||.. ||||+||.++||++++.+ +.++|||++...
T Consensus 82 ~G~~lkd~l~~~---------~~~~~r~vG~~vg~lH~~-givHGDLTtsNiIl~~~~-i~~IDfGLg~~s 141 (204)
T COG3642 82 EGELLKDALEEA---------RPDLLREVGRLVGKLHKA-GIVHGDLTTSNIILSGGR-IYFIDFGLGEFS 141 (204)
T ss_pred CChhHHHHHHhc---------chHHHHHHHHHHHHHHhc-CeecCCCccceEEEeCCc-EEEEECCccccc
Confidence 998888888532 256777788888899998 999999999999998654 999999998643
|
|
| >PF13414 TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2PL2_B 3IEG_B 2FBN_A | Back alignment and domain information |
|---|
Probab=99.30 E-value=5.5e-12 Score=92.72 Aligned_cols=67 Identities=21% Similarity=0.371 Sum_probs=64.6
Q ss_pred HhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcC-CHHHHHHHHHHHHhcCC
Q 011519 377 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSD-MPQEALNDASQAQVISP 444 (484)
Q Consensus 377 ~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~-~~~~A~~~~~~al~~~p 444 (484)
++..+...|..++..|+|++|+..|++||+++|+ ++.+|+++|.++..+| ++++|+.++++|++++|
T Consensus 2 ~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~-~~~~~~~~g~~~~~~~~~~~~A~~~~~~al~l~P 69 (69)
T PF13414_consen 2 NAEAWYNLGQIYFQQGDYEEAIEYFEKAIELDPN-NAEAYYNLGLAYMKLGKDYEEAIEDFEKALKLDP 69 (69)
T ss_dssp SHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHSTT-HHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHhCccHHHHHHHHHHHHHcCc
Confidence 4678899999999999999999999999999999 9999999999999999 79999999999999998
|
... |
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.29 E-value=1.8e-12 Score=135.12 Aligned_cols=243 Identities=15% Similarity=0.109 Sum_probs=173.2
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCC---CCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEE
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRS---AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 131 (484)
++...+++-+-+|+++.++.+.- ..|-..++|..... ...+.+....+-.++-..++|-++...-.+.-....++|
T Consensus 803 ~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~ 882 (1205)
T KOG0606|consen 803 PDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPLV 882 (1205)
T ss_pred CccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcchh
Confidence 34445666778999999998873 33433444443221 111223333343444444567777666665666788999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccC----
Q 011519 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR---- 207 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~---- 207 (484)
++|..|++|...|+ ..+..+..-.......+..+++|||+. .++|+|++|.|+|+..+|..+++|||......
T Consensus 883 ~~~~~~~~~~Skl~--~~~~~saepaRs~i~~~vqs~e~L~s~-~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p 959 (1205)
T KOG0606|consen 883 GHYLNGGDLPSKLH--NSGCLSAEPARSPILERVQSLESLHSS-LRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPP 959 (1205)
T ss_pred hHHhccCCchhhhh--cCCCcccccccchhHHHHhhhhccccc-hhhcccccccchhhcccCCcccCccccccccccccC
Confidence 99999999999986 334566666777788899999999997 79999999999999999999999998432110
Q ss_pred -------------------------------CCCcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchh
Q 011519 208 -------------------------------DGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHA 256 (484)
Q Consensus 208 -------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~ 256 (484)
......+|+.|.+||...+......+|.|++|++++|.++|..||....
T Consensus 960 ~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~t 1039 (1205)
T KOG0606|consen 960 TTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAET 1039 (1205)
T ss_pred cCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcc
Confidence 0112456899999999999999999999999999999999998887654
Q ss_pred hHHhhhccccccccccccCCCChHHHHHHHHHHHHHhccCCCCCCChH
Q 011519 257 LDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPR 304 (484)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ 304 (484)
...+.+......+. ...-+...+....+++...+..+|.+|..+.
T Consensus 1040 pq~~f~ni~~~~~~---~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1040 PQQIFENILNRDIP---WPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred hhhhhhccccCCCC---CCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 44333222222211 1123445678899999999999999997765
|
|
| >KOG3087 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.28 E-value=3.5e-11 Score=102.03 Aligned_cols=144 Identities=16% Similarity=0.124 Sum_probs=104.4
Q ss_pred ccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCc--------cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEE
Q 011519 61 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP--------DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (484)
Q Consensus 61 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 132 (484)
.+..+-+|+-+.|+++.+ .|+.+.||.--..... ..++-.+|+.+|.+++--.|.--.=++.+...-.|+|
T Consensus 11 ~l~likQGAEArv~~~~~-~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF-SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeecc-CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 345557899999999988 4667777753222221 1346788999999987544444444455666779999
Q ss_pred ecCCC-CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCC---CceeeccCCcccc
Q 011519 133 EYMPN-DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV---NPRLSCFGLMKNS 206 (484)
Q Consensus 133 Ey~~~-gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~---~~kl~DfG~a~~~ 206 (484)
||++| -++.+++...............++..|-..+.-||.. ++||+||..+||++.+++ .+.++|||++...
T Consensus 90 E~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~n-diiHGDLTTSNill~~~~~~~~~~lIdfgls~~s 166 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDN-DIIHGDLTTSNILLRSDGNQITPILIDFGLSSVS 166 (229)
T ss_pred EeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhC-CeecccccccceEEecCCCcCceEEEeecchhcc
Confidence 99977 4788888653333333344478899999999999999 999999999999997554 3589999997553
|
|
| >KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.27 E-value=7e-11 Score=114.93 Aligned_cols=216 Identities=17% Similarity=0.159 Sum_probs=157.4
Q ss_pred CCceEEEEE-eCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeee----CCceEEEEecCCC-CCHHh
Q 011519 69 APNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE----GDERLLVAEYMPN-DTLAK 142 (484)
Q Consensus 69 ~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~----~~~~~lv~Ey~~~-gsL~~ 142 (484)
.-.+.|+++ ..+|..|++|+++-........-..-++.++++.|+|||++..+|.. +..+++|++|.++ +||.+
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d 367 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYD 367 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHH
Confidence 346789999 67899999999954333322233455788999999999999999863 3458999999876 67777
Q ss_pred hhccC-------------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC
Q 011519 143 HLFHW-------------ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 209 (484)
Q Consensus 143 ~l~~~-------------~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 209 (484)
..... .+...++..+|.++.|+..||.++|+. |+..+-|.|.+||++.+.+++|+..|+.......
T Consensus 368 ~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss-GLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~d 446 (655)
T KOG3741|consen 368 LYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS-GLACKTLDLKKILVTGKMRIRISGCGIMDVLQED 446 (655)
T ss_pred HHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc-CceeecccHhHeEeeCcceEEEecccceeeecCC
Confidence 65422 123467899999999999999999999 9999999999999999989999988876655443
Q ss_pred CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHH
Q 011519 210 RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289 (484)
Q Consensus 210 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 289 (484)
.. +.+.+ ..+-|.=-||.+++-|.||..--. ............+....+.++++++
T Consensus 447 ~~----------~~le~---~Qq~D~~~lG~ll~aLAt~~~ns~-----------~~d~~~~s~~~~I~~~yS~D~rn~v 502 (655)
T KOG3741|consen 447 PT----------EPLES---QQQNDLRDLGLLLLALATGTENSN-----------RTDSTQSSHLTRITTTYSTDLRNVV 502 (655)
T ss_pred CC----------cchhH---HhhhhHHHHHHHHHHHhhcccccc-----------cccchHHHHHHHhhhhhhHHHHHHH
Confidence 30 11111 125688889999999999974211 0111111101123455678999999
Q ss_pred HHHhccCCCCCCChHHHHHHH
Q 011519 290 SRCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 290 ~~cl~~dp~~Rps~~~il~~l 310 (484)
......++++ -++.+++.++
T Consensus 503 ~yl~s~~~~~-ksI~~llp~~ 522 (655)
T KOG3741|consen 503 EYLESLNFRE-KSIQDLLPMI 522 (655)
T ss_pred HHHHhcCccc-ccHHHHHHHH
Confidence 9999999988 7888888774
|
|
| >TIGR00990 3a0801s09 mitochondrial precursor proteins import receptor (72 kDa mitochondrial outermembrane protein) (mitochondrial import receptor for the ADP/ATP carrier) (translocase of outermembrane tom70) | Back alignment and domain information |
|---|
Probab=99.26 E-value=5e-11 Score=126.46 Aligned_cols=105 Identities=14% Similarity=0.132 Sum_probs=75.6
Q ss_pred HHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHH
Q 011519 375 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQA 454 (484)
Q Consensus 375 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 454 (484)
+..+..+...|..++.+|++++|+..|+++++++|. ....|.++|.++..+|++++|+.+++++++++|+++.+|+.+|
T Consensus 328 ~~~a~a~~~lg~~~~~~g~~~eA~~~~~kal~l~P~-~~~~~~~la~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~lg 406 (615)
T TIGR00990 328 EKEAIALNLRGTFKCLKGKHLEALADLSKSIELDPR-VTQSYIKRASMNLELGDPDKAEEDFDKALKLNSEDPDIYYHRA 406 (615)
T ss_pred hhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 345556666777777777777777777777777777 6777777777777777777777777777777777777777777
Q ss_pred HHHHHcCCHHHHHHHHHHHHhccccc
Q 011519 455 AALFALGKENEAQAALREASILENKK 480 (484)
Q Consensus 455 ~~~~~~~~~~~A~~~~~~al~l~~~~ 480 (484)
.+++.+|++++|+..|+++++++|++
T Consensus 407 ~~~~~~g~~~~A~~~~~kal~l~P~~ 432 (615)
T TIGR00990 407 QLHFIKGEFAQAGKDYQKSIDLDPDF 432 (615)
T ss_pred HHHHHcCCHHHHHHHHHHHHHcCccC
Confidence 77777777777777777777777654
|
|
| >TIGR02795 tol_pal_ybgF tol-pal system protein YbgF | Back alignment and domain information |
|---|
Probab=99.25 E-value=1e-10 Score=95.94 Aligned_cols=102 Identities=17% Similarity=0.125 Sum_probs=94.5
Q ss_pred hhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCC---HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCC---hHHHHH
Q 011519 379 LNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVS---PTAFARRSLSYLMSDMPQEALNDASQAQVISPVW---HMAAYL 452 (484)
Q Consensus 379 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~---~~a~~~ 452 (484)
..++..|..++++|++++|+..|++++...|+ + +.+++.+|.++.+.|++++|+..+++++..+|++ +.+++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~ 81 (119)
T TIGR02795 3 EAYYDAALLVLKAGDYADAIQAFQAFLKKYPK-STYAPNAHYWLGEAYYAQGKYADAAKAFLAVVKKYPKSPKAPDALLK 81 (119)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC-ccccHHHHHHHHHHHHhhccHHHHHHHHHHHHHHCCCCCcccHHHHH
Confidence 45788999999999999999999999999987 5 5689999999999999999999999999999885 688999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 453 QAAALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 453 ~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
+|.++..+|++++|+..|+++++..|++.
T Consensus 82 ~~~~~~~~~~~~~A~~~~~~~~~~~p~~~ 110 (119)
T TIGR02795 82 LGMSLQELGDKEKAKATLQQVIKRYPGSS 110 (119)
T ss_pred HHHHHHHhCChHHHHHHHHHHHHHCcCCh
Confidence 99999999999999999999999988654
|
Members of this protein family are the product of one of seven genes regularly clustered in operons to encode the proteins of the tol-pal system, which is critical for maintaining the integrity of the bacterial outer membrane. The gene for this periplasmic protein has been designated orf2 and ybgF. All members of the seed alignment were from unique tol-pal gene regions from completed bacterial genomes. The architecture of this protein is a signal sequence, a low-complexity region usually rich in Asn and Gln, a well-conserved region with tandem repeats that resemble the tetratricopeptide (TPR) repeat, involved in protein-protein interaction. |
| >PF12895 Apc3: Anaphase-promoting complex, cyclosome, subunit 3; PDB: 3KAE_D 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2XPI_A 3ULQ_A | Back alignment and domain information |
|---|
Probab=99.25 E-value=2.1e-11 Score=93.36 Aligned_cols=82 Identities=22% Similarity=0.328 Sum_probs=74.4
Q ss_pred ccCHHHHHHHHHHHHhcCCCC-CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHcCCHHHHHHH
Q 011519 391 HKDFRASIECYTQFIDVGTMV-SPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAA 469 (484)
Q Consensus 391 ~~~~~~A~~~~~~ai~~~p~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~ 469 (484)
+|+|+.|+..|+++++.+|.. +...++++|.||+++|+|++|+..+++ ++.+|.+...++.+|.+++.+|+|++|++.
T Consensus 2 ~~~y~~Ai~~~~k~~~~~~~~~~~~~~~~la~~~~~~~~y~~A~~~~~~-~~~~~~~~~~~~l~a~~~~~l~~y~eAi~~ 80 (84)
T PF12895_consen 2 QGNYENAIKYYEKLLELDPTNPNSAYLYNLAQCYFQQGKYEEAIELLQK-LKLDPSNPDIHYLLARCLLKLGKYEEAIKA 80 (84)
T ss_dssp TT-HHHHHHHHHHHHHHHCGTHHHHHHHHHHHHHHHTTHHHHHHHHHHC-HTHHHCHHHHHHHHHHHHHHTT-HHHHHHH
T ss_pred CccHHHHHHHHHHHHHHCCCChhHHHHHHHHHHHHHCCCHHHHHHHHHH-hCCCCCCHHHHHHHHHHHHHhCCHHHHHHH
Confidence 689999999999999999961 356788899999999999999999999 999999999999999999999999999999
Q ss_pred HHHH
Q 011519 470 LREA 473 (484)
Q Consensus 470 ~~~a 473 (484)
|++|
T Consensus 81 l~~~ 84 (84)
T PF12895_consen 81 LEKA 84 (84)
T ss_dssp HHHH
T ss_pred HhcC
Confidence 9986
|
|
| >PRK02603 photosystem I assembly protein Ycf3; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.2e-10 Score=102.36 Aligned_cols=108 Identities=16% Similarity=0.133 Sum_probs=98.1
Q ss_pred hHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCC--CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHH
Q 011519 374 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMV--SPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAY 451 (484)
Q Consensus 374 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~--~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~ 451 (484)
....+..+...|..+...|++++|+..|+++++..|+. ...++.++|.++..+|++++|+..+.++++++|++..+++
T Consensus 31 ~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~ 110 (172)
T PRK02603 31 KAKEAFVYYRDGMSAQADGEYAEALENYEEALKLEEDPNDRSYILYNMGIIYASNGEHDKALEYYHQALELNPKQPSALN 110 (172)
T ss_pred HhhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHH
Confidence 45678889999999999999999999999999987761 2468999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCC--------------HHHHHHHHHHHHhcccccc
Q 011519 452 LQAAALFALGK--------------ENEAQAALREASILENKKS 481 (484)
Q Consensus 452 ~~g~~~~~~~~--------------~~~A~~~~~~al~l~~~~~ 481 (484)
.+|.++..+|+ +++|++.++++++++|++.
T Consensus 111 ~lg~~~~~~g~~~~a~~~~~~A~~~~~~A~~~~~~a~~~~p~~~ 154 (172)
T PRK02603 111 NIAVIYHKRGEKAEEAGDQDEAEALFDKAAEYWKQAIRLAPNNY 154 (172)
T ss_pred HHHHHHHHcCChHhHhhCHHHHHHHHHHHHHHHHHHHhhCchhH
Confidence 99999999988 6889999999999998764
|
|
| >PRK11189 lipoprotein NlpI; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=9.3e-11 Score=112.42 Aligned_cols=101 Identities=12% Similarity=0.030 Sum_probs=78.2
Q ss_pred hhhHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHH
Q 011519 372 TGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAY 451 (484)
Q Consensus 372 ~~~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~ 451 (484)
..+++.+..+...|..+...|++++|+..|+++++++|+ +..+|.++|.++...|++++|+.+++++++++|+++....
T Consensus 92 ~l~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~Al~l~P~-~~~a~~~lg~~l~~~g~~~eA~~~~~~al~~~P~~~~~~~ 170 (296)
T PRK11189 92 ALRPDMADAYNYLGIYLTQAGNFDAAYEAFDSVLELDPT-YNYAYLNRGIALYYGGRYELAQDDLLAFYQDDPNDPYRAL 170 (296)
T ss_pred HcCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHH
Confidence 335667888999999999999999999999999999999 9999999999999999999999999999988887653211
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHH
Q 011519 452 LQAAALFALGKENEAQAALREAS 474 (484)
Q Consensus 452 ~~g~~~~~~~~~~~A~~~~~~al 474 (484)
.. ..+...+++++|+..|++++
T Consensus 171 ~~-~l~~~~~~~~~A~~~l~~~~ 192 (296)
T PRK11189 171 WL-YLAESKLDPKQAKENLKQRY 192 (296)
T ss_pred HH-HHHHccCCHHHHHHHHHHHH
Confidence 11 12223445555555554444
|
|
| >cd00189 TPR Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans in various subcellular locations; involved in a variety of functions including protein-protein interactions, but common features in the interaction partners have not been defined; involved in chaperone, cell-cycle, transciption, and protein transport complexes; the number of TPR motifs varies among proteins (1,3-11,13 15,16,19); 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accomodate an alpha-helix of a target protein; it has been proposed that TPR proteins preferably interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes; examples of TPR-proteins include, Cdc16p, Cdc23p and C | Back alignment and domain information |
|---|
Probab=99.24 E-value=9.7e-11 Score=90.89 Aligned_cols=99 Identities=23% Similarity=0.315 Sum_probs=94.0
Q ss_pred hhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHH
Q 011519 380 NSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFA 459 (484)
Q Consensus 380 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~ 459 (484)
.+...|..++..|++++|+..|+++++..|. +..++.++|.++...+++++|+..+++++.+.|.+..+++.+|.++..
T Consensus 2 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (100)
T cd00189 2 ALLNLGNLYYKLGDYDEALEYYEKALELDPD-NADAYYNLAAAYYKLGKYEEALEDYEKALELDPDNAKAYYNLGLAYYK 80 (100)
T ss_pred HHHHHHHHHHHHhcHHHHHHHHHHHHhcCCc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhHHHHHHHHHHH
Confidence 3567899999999999999999999999999 888999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHHhcccc
Q 011519 460 LGKENEAQAALREASILENK 479 (484)
Q Consensus 460 ~~~~~~A~~~~~~al~l~~~ 479 (484)
+|++++|...++++++++|+
T Consensus 81 ~~~~~~a~~~~~~~~~~~~~ 100 (100)
T cd00189 81 LGKYEEALEAYEKALELDPN 100 (100)
T ss_pred HHhHHHHHHHHHHHHccCCC
Confidence 99999999999999998763
|
|
| >PRK15359 type III secretion system chaperone protein SscB; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=5.2e-11 Score=101.15 Aligned_cols=93 Identities=12% Similarity=0.030 Sum_probs=85.9
Q ss_pred hhhhhhhHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCh
Q 011519 368 TEMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWH 447 (484)
Q Consensus 368 ~e~~~~~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~ 447 (484)
......++.....+...|.++.+.|++++|+..|+++++++|. ++.+++++|.++..+|++++|+..+++|++++|+++
T Consensus 48 ~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~y~~Al~l~p~-~~~a~~~lg~~l~~~g~~~eAi~~~~~Al~~~p~~~ 126 (144)
T PRK15359 48 SWLVMAQPWSWRAHIALAGTWMMLKEYTTAINFYGHALMLDAS-HPEPVYQTGVCLKMMGEPGLAREAFQTAIKMSYADA 126 (144)
T ss_pred HHHHHcCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCC-CcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCh
Confidence 3444556778889999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcC
Q 011519 448 MAAYLQAAALFALG 461 (484)
Q Consensus 448 ~a~~~~g~~~~~~~ 461 (484)
..+..+|.+...++
T Consensus 127 ~~~~~~~~~~~~l~ 140 (144)
T PRK15359 127 SWSEIRQNAQIMVD 140 (144)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999987654
|
|
| >COG3063 PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.6e-10 Score=101.14 Aligned_cols=105 Identities=11% Similarity=0.030 Sum_probs=64.9
Q ss_pred hHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc--CCCChHHHH
Q 011519 374 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVI--SPVWHMAAY 451 (484)
Q Consensus 374 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~--~p~~~~a~~ 451 (484)
+++....+.-++..+.+.|+.+.|-+.|++|++++|+ +.++++|.|.-+..+|+|++|...|++|++. .|..++.|-
T Consensus 65 DPs~~~a~~~~A~~Yq~~Ge~~~A~e~YrkAlsl~p~-~GdVLNNYG~FLC~qg~~~eA~q~F~~Al~~P~Y~~~s~t~e 143 (250)
T COG3063 65 DPSYYLAHLVRAHYYQKLGENDLADESYRKALSLAPN-NGDVLNNYGAFLCAQGRPEEAMQQFERALADPAYGEPSDTLE 143 (250)
T ss_pred CcccHHHHHHHHHHHHHcCChhhHHHHHHHHHhcCCC-ccchhhhhhHHHHhCCChHHHHHHHHHHHhCCCCCCcchhhh
Confidence 3444555555666666666666666666666666666 6666666666666666666666666666543 234456666
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhcccc
Q 011519 452 LQAAALFALGKENEAQAALREASILENK 479 (484)
Q Consensus 452 ~~g~~~~~~~~~~~A~~~~~~al~l~~~ 479 (484)
++|.|.+++|+.+.|...|+++|++||.
T Consensus 144 N~G~Cal~~gq~~~A~~~l~raL~~dp~ 171 (250)
T COG3063 144 NLGLCALKAGQFDQAEEYLKRALELDPQ 171 (250)
T ss_pred hhHHHHhhcCCchhHHHHHHHHHHhCcC
Confidence 6666666666666666666666666654
|
|
| >KOG0547 consensus Translocase of outer mitochondrial membrane complex, subunit TOM70/TOM72 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.22 E-value=4.9e-11 Score=114.35 Aligned_cols=104 Identities=17% Similarity=0.208 Sum_probs=96.0
Q ss_pred HhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHH
Q 011519 377 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAA 456 (484)
Q Consensus 377 ~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 456 (484)
-+..+...|.=++-.|++-.|...|+++|+++|. +...|..||..|+...+.++-..+|++|..+||.|++.||+||.+
T Consensus 325 ~A~al~~~gtF~fL~g~~~~a~~d~~~~I~l~~~-~~~lyI~~a~~y~d~~~~~~~~~~F~~A~~ldp~n~dvYyHRgQm 403 (606)
T KOG0547|consen 325 MAEALLLRGTFHFLKGDSLGAQEDFDAAIKLDPA-FNSLYIKRAAAYADENQSEKMWKDFNKAEDLDPENPDVYYHRGQM 403 (606)
T ss_pred HHHHHHHhhhhhhhcCCchhhhhhHHHHHhcCcc-cchHHHHHHHHHhhhhccHHHHHHHHHHHhcCCCCCchhHhHHHH
Confidence 3667888888889999999999999999999999 777899999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHHhcccccc
Q 011519 457 LFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 457 ~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
++-+++|++|+++|++|++|+|.++
T Consensus 404 ~flL~q~e~A~aDF~Kai~L~pe~~ 428 (606)
T KOG0547|consen 404 RFLLQQYEEAIADFQKAISLDPENA 428 (606)
T ss_pred HHHHHHHHHHHHHHHHHhhcChhhh
Confidence 9999999999999999999998764
|
|
| >PLN02789 farnesyltranstransferase | Back alignment and domain information |
|---|
Probab=99.21 E-value=3e-10 Score=109.01 Aligned_cols=109 Identities=6% Similarity=-0.107 Sum_probs=101.6
Q ss_pred hhhHHHhhhhhHhHHHHHhcc-CHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCH--HHHHHHHHHHHhcCCCChH
Q 011519 372 TGQMQETLNSKKKGDVAFRHK-DFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMP--QEALNDASQAQVISPVWHM 448 (484)
Q Consensus 372 ~~~~~~a~~~~~~g~~~~~~~-~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~--~~A~~~~~~al~~~p~~~~ 448 (484)
..++.....|..+|..+.+.+ ++++|+..++++|+.+|+ +..+|++|+.++.++|+. ++++..+++++++||++..
T Consensus 65 ~lnP~~ytaW~~R~~iL~~L~~~l~eeL~~~~~~i~~npk-nyqaW~~R~~~l~~l~~~~~~~el~~~~kal~~dpkNy~ 143 (320)
T PLN02789 65 RLNPGNYTVWHFRRLCLEALDADLEEELDFAEDVAEDNPK-NYQIWHHRRWLAEKLGPDAANKELEFTRKILSLDAKNYH 143 (320)
T ss_pred HHCchhHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHCCc-chHHhHHHHHHHHHcCchhhHHHHHHHHHHHHhCcccHH
Confidence 446778889999999999988 689999999999999999 999999999999999984 7899999999999999999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 449 AAYLQAAALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 449 a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
||++||.++..+|+|++|++.+.++|++|+.+.
T Consensus 144 AW~~R~w~l~~l~~~~eeL~~~~~~I~~d~~N~ 176 (320)
T PLN02789 144 AWSHRQWVLRTLGGWEDELEYCHQLLEEDVRNN 176 (320)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCch
Confidence 999999999999999999999999999998764
|
|
| >CHL00033 ycf3 photosystem I assembly protein Ycf3 | Back alignment and domain information |
|---|
Probab=99.20 E-value=4.2e-10 Score=98.54 Aligned_cols=106 Identities=15% Similarity=0.087 Sum_probs=91.2
Q ss_pred HHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCC--CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHH
Q 011519 375 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTM--VSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYL 452 (484)
Q Consensus 375 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~--~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~ 452 (484)
...+..+...|..+...|+|++|+..|++|+.+.|+ ..+.+|.++|.++..+|++++|+..+++|++++|.+..++++
T Consensus 32 ~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~~lg~~~~~~g~~~eA~~~~~~Al~~~~~~~~~~~~ 111 (168)
T CHL00033 32 EKEAFTYYRDGMSAQSEGEYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFQALERNPFLPQALNN 111 (168)
T ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhccccchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHH
Confidence 456778899999999999999999999999998765 123589999999999999999999999999999999999999
Q ss_pred HHHHHH-------HcCCHH-------HHHHHHHHHHhccccc
Q 011519 453 QAAALF-------ALGKEN-------EAQAALREASILENKK 480 (484)
Q Consensus 453 ~g~~~~-------~~~~~~-------~A~~~~~~al~l~~~~ 480 (484)
+|.++. .+|+++ +|+..|++++.++|.+
T Consensus 112 la~i~~~~~~~~~~~g~~~~A~~~~~~a~~~~~~a~~~~p~~ 153 (168)
T CHL00033 112 MAVICHYRGEQAIEQGDSEIAEAWFDQAAEYWKQAIALAPGN 153 (168)
T ss_pred HHHHHHHhhHHHHHcccHHHHHHHHHHHHHHHHHHHHhCccc
Confidence 999999 777877 5555556677777743
|
|
| >PRK09782 bacteriophage N4 receptor, outer membrane subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.3e-10 Score=126.84 Aligned_cols=102 Identities=9% Similarity=-0.098 Sum_probs=99.0
Q ss_pred hhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 011519 378 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAAL 457 (484)
Q Consensus 378 a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 457 (484)
...+...|..+.+.|++++|+..|+++++++|+ ++.+++++|.++..+|++++|+..+++|++++|+++.+++++|.++
T Consensus 609 ~~a~~~LA~~l~~lG~~deA~~~l~~AL~l~Pd-~~~a~~nLG~aL~~~G~~eeAi~~l~~AL~l~P~~~~a~~nLA~al 687 (987)
T PRK09782 609 ANAYVARATIYRQRHNVPAAVSDLRAALELEPN-NSNYQAALGYALWDSGDIAQSREMLERAHKGLPDDPALIRQLAYVN 687 (987)
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 677889999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHHhccccc
Q 011519 458 FALGKENEAQAALREASILENKK 480 (484)
Q Consensus 458 ~~~~~~~~A~~~~~~al~l~~~~ 480 (484)
..+|++++|+..|++|++++|..
T Consensus 688 ~~lGd~~eA~~~l~~Al~l~P~~ 710 (987)
T PRK09782 688 QRLDDMAATQHYARLVIDDIDNQ 710 (987)
T ss_pred HHCCCHHHHHHHHHHHHhcCCCC
Confidence 99999999999999999999854
|
|
| >PRK12370 invasion protein regulator; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.9e-10 Score=120.12 Aligned_cols=85 Identities=19% Similarity=0.146 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 011519 394 FRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREA 473 (484)
Q Consensus 394 ~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a 473 (484)
+++|+..+++|++++|+ ++.+|..+|.++...|++++|+..+++|++++|+++.+|+.+|.++..+|++++|+..|++|
T Consensus 320 ~~~A~~~~~~Al~ldP~-~~~a~~~lg~~~~~~g~~~~A~~~~~~Al~l~P~~~~a~~~lg~~l~~~G~~~eAi~~~~~A 398 (553)
T PRK12370 320 MIKAKEHAIKATELDHN-NPQALGLLGLINTIHSEYIVGSLLFKQANLLSPISADIKYYYGWNLFMAGQLEEALQTINEC 398 (553)
T ss_pred HHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 44555555555555554 44455555555555555555555555555555555555555555555555555555555555
Q ss_pred Hhcccc
Q 011519 474 SILENK 479 (484)
Q Consensus 474 l~l~~~ 479 (484)
++++|.
T Consensus 399 l~l~P~ 404 (553)
T PRK12370 399 LKLDPT 404 (553)
T ss_pred HhcCCC
Confidence 555443
|
|
| >KOG1126 consensus DNA-binding cell division cycle control protein [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.14 E-value=6.6e-11 Score=117.77 Aligned_cols=104 Identities=14% Similarity=0.132 Sum_probs=62.5
Q ss_pred HHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHH
Q 011519 376 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAA 455 (484)
Q Consensus 376 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 455 (484)
..+.+|.-.|-.+....+|+.|..+|++||..+|. ..-+|+.+|.+|+++++++.|.-.|.+|++++|.+.......|.
T Consensus 453 ~faYayTLlGhE~~~~ee~d~a~~~fr~Al~~~~r-hYnAwYGlG~vy~Kqek~e~Ae~~fqkA~~INP~nsvi~~~~g~ 531 (638)
T KOG1126|consen 453 RFAYAYTLLGHESIATEEFDKAMKSFRKALGVDPR-HYNAWYGLGTVYLKQEKLEFAEFHFQKAVEINPSNSVILCHIGR 531 (638)
T ss_pred ccchhhhhcCChhhhhHHHHhHHHHHHhhhcCCch-hhHHHHhhhhheeccchhhHHHHHHHhhhcCCccchhHHhhhhH
Confidence 34445555555555555555555555555555555 55566666666666666666666666666666666666666666
Q ss_pred HHHHcCCHHHHHHHHHHHHhccccc
Q 011519 456 ALFALGKENEAQAALREASILENKK 480 (484)
Q Consensus 456 ~~~~~~~~~~A~~~~~~al~l~~~~ 480 (484)
++.++|+.++|+..|++|+.+||++
T Consensus 532 ~~~~~k~~d~AL~~~~~A~~ld~kn 556 (638)
T KOG1126|consen 532 IQHQLKRKDKALQLYEKAIHLDPKN 556 (638)
T ss_pred HHHHhhhhhHHHHHHHHHHhcCCCC
Confidence 6666666666666666666666554
|
|
| >PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional | Back alignment and domain information |
|---|
Probab=99.14 E-value=4.6e-10 Score=105.01 Aligned_cols=132 Identities=11% Similarity=0.088 Sum_probs=97.5
Q ss_pred eEEEEEeCCCcEEEEEEecCCCCcc-----------HHHHHHHHHHHhcCCCCc--eeeeeeeeee-----CCceEEEEe
Q 011519 72 VVYKGKLENQFRIAVKRFNRSAWPD-----------ARQFLEEARAVGQLRNRR--LANLLGCCCE-----GDERLLVAE 133 (484)
Q Consensus 72 ~Vy~~~~~~~~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~hpn--iv~l~~~~~~-----~~~~~lv~E 133 (484)
.|+++.. +|+.|.||......... ...+.+|...+.+|..-+ ++..++++.. ....+||||
T Consensus 37 rvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte 115 (268)
T PRK15123 37 RTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITE 115 (268)
T ss_pred eEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEe
Confidence 4667666 56789999775433211 114789999988885333 3344445432 234789999
Q ss_pred cCCCC-CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecC-------CCCceeeccCCccc
Q 011519 134 YMPND-TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-------DVNPRLSCFGLMKN 205 (484)
Q Consensus 134 y~~~g-sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~-------~~~~kl~DfG~a~~ 205 (484)
++++- +|.+++..+...+.+......++.+++..+.-||.. ||+|+|++++|||++. ++.+.|+||+.+..
T Consensus 116 ~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~-Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~ 194 (268)
T PRK15123 116 DLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAA-GINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQI 194 (268)
T ss_pred eCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHC-cCccCCCChhhEEEeccccCCCCCceEEEEECCcccc
Confidence 99885 899998643344566778889999999999999999 9999999999999974 46799999998753
|
|
| >PRK12370 invasion protein regulator; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=3.5e-10 Score=118.07 Aligned_cols=103 Identities=12% Similarity=0.030 Sum_probs=91.6
Q ss_pred hHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHH
Q 011519 374 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQ 453 (484)
Q Consensus 374 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 453 (484)
++.++..+...|..+...|++++|+..|++|++++|+ ++.+|+++|.++..+|++++|+..++++++++|.++.+++.+
T Consensus 334 dP~~~~a~~~lg~~~~~~g~~~~A~~~~~~Al~l~P~-~~~a~~~lg~~l~~~G~~~eAi~~~~~Al~l~P~~~~~~~~~ 412 (553)
T PRK12370 334 DHNNPQALGLLGLINTIHSEYIVGSLLFKQANLLSPI-SADIKYYYGWNLFMAGQLEEALQTINECLKLDPTRAAAGITK 412 (553)
T ss_pred CCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCChhhHHHH
Confidence 4566777888899999999999999999999999999 999999999999999999999999999999999998888888
Q ss_pred HHHHHHcCCHHHHHHHHHHHHhcc
Q 011519 454 AAALFALGKENEAQAALREASILE 477 (484)
Q Consensus 454 g~~~~~~~~~~~A~~~~~~al~l~ 477 (484)
+.+++.+|++++|++.++++++.+
T Consensus 413 ~~~~~~~g~~eeA~~~~~~~l~~~ 436 (553)
T PRK12370 413 LWITYYHTGIDDAIRLGDELRSQH 436 (553)
T ss_pred HHHHHhccCHHHHHHHHHHHHHhc
Confidence 888888999999999999988764
|
|
| >PRK15331 chaperone protein SicA; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=5.7e-10 Score=93.71 Aligned_cols=101 Identities=6% Similarity=-0.058 Sum_probs=96.5
Q ss_pred HHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHH
Q 011519 375 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQA 454 (484)
Q Consensus 375 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 454 (484)
-......+..|..++.+|++++|...|.-...++|. ++..+..+|.|+..+++|++|+..|..|..++++++..+|+.|
T Consensus 34 ~~~le~iY~~Ay~~y~~Gk~~eA~~~F~~L~~~d~~-n~~Y~~GLaa~~Q~~k~y~~Ai~~Y~~A~~l~~~dp~p~f~ag 112 (165)
T PRK15331 34 QDMMDGLYAHAYEFYNQGRLDEAETFFRFLCIYDFY-NPDYTMGLAAVCQLKKQFQKACDLYAVAFTLLKNDYRPVFFTG 112 (165)
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCccchHH
Confidence 455677889999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHhc
Q 011519 455 AALFALGKENEAQAALREASIL 476 (484)
Q Consensus 455 ~~~~~~~~~~~A~~~~~~al~l 476 (484)
.+|+.+|+.++|+..|..|++.
T Consensus 113 qC~l~l~~~~~A~~~f~~a~~~ 134 (165)
T PRK15331 113 QCQLLMRKAAKARQCFELVNER 134 (165)
T ss_pred HHHHHhCCHHHHHHHHHHHHhC
Confidence 9999999999999999999874
|
|
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=8.7e-10 Score=115.90 Aligned_cols=128 Identities=13% Similarity=-0.036 Sum_probs=110.8
Q ss_pred HHHHHHHHhCCcCchhhHhh-hhhhhHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCC
Q 011519 350 AIHEILEKLGYKDDEGAATE-MWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDM 428 (484)
Q Consensus 350 ~~~e~l~~~~y~~~~~~a~e-~~~~~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~ 428 (484)
.+.+....+|.-++....-+ ..+-.+.........+..+.+.+++++|+..+++++..+|+ ++..++++|.++.++|+
T Consensus 91 ~La~i~~~~g~~~ea~~~l~~~~~~~Pd~~~a~~~~a~~L~~~~~~eeA~~~~~~~l~~~p~-~~~~~~~~a~~l~~~g~ 169 (694)
T PRK15179 91 LVARALEAAHRSDEGLAVWRGIHQRFPDSSEAFILMLRGVKRQQGIEAGRAEIELYFSGGSS-SAREILLEAKSWDEIGQ 169 (694)
T ss_pred HHHHHHHHcCCcHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHhhcCCC-CHHHHHHHHHHHHHhcc
Confidence 55556666775554433322 33446788889999999999999999999999999999999 99999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhccc
Q 011519 429 PQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILEN 478 (484)
Q Consensus 429 ~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~ 478 (484)
|++|++.|++++..+|+++.++..+|.++..+|+.++|...|++|+++..
T Consensus 170 ~~~A~~~y~~~~~~~p~~~~~~~~~a~~l~~~G~~~~A~~~~~~a~~~~~ 219 (694)
T PRK15179 170 SEQADACFERLSRQHPEFENGYVGWAQSLTRRGALWRARDVLQAGLDAIG 219 (694)
T ss_pred hHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999998753
|
|
| >KOG1126 consensus DNA-binding cell division cycle control protein [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.11 E-value=6.1e-11 Score=117.97 Aligned_cols=113 Identities=14% Similarity=0.132 Sum_probs=106.5
Q ss_pred hhhhhhhHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCh
Q 011519 368 TEMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWH 447 (484)
Q Consensus 368 ~e~~~~~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~ 447 (484)
.++.+.++.....|...||.+.-+++++.||.+|.+||.+||. .+-+|.-.|.=+....+++.|...|.+||.++|++-
T Consensus 411 q~Li~~~~~sPesWca~GNcfSLQkdh~~Aik~f~RAiQldp~-faYayTLlGhE~~~~ee~d~a~~~fr~Al~~~~rhY 489 (638)
T KOG1126|consen 411 QDLIDTDPNSPESWCALGNCFSLQKDHDTAIKCFKRAIQLDPR-FAYAYTLLGHESIATEEFDKAMKSFRKALGVDPRHY 489 (638)
T ss_pred HHHHhhCCCCcHHHHHhcchhhhhhHHHHHHHHHHHhhccCCc-cchhhhhcCChhhhhHHHHhHHHHHHhhhcCCchhh
Confidence 4555666778889999999999999999999999999999999 888999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 448 MAAYLQAAALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 448 ~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
.|||-+|.+|..+++++.|.-.|++|++++|.+.
T Consensus 490 nAwYGlG~vy~Kqek~e~Ae~~fqkA~~INP~ns 523 (638)
T KOG1126|consen 490 NAWYGLGTVYLKQEKLEFAEFHFQKAVEINPSNS 523 (638)
T ss_pred HHHHhhhhheeccchhhHHHHHHHhhhcCCccch
Confidence 9999999999999999999999999999999764
|
|
| >PF13432 TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL_A 3CVQ_A 3CV0_A 2GW1_B 3CVN_A 3QKY_A 2PL2_B | Back alignment and domain information |
|---|
Probab=99.10 E-value=3.2e-10 Score=82.14 Aligned_cols=63 Identities=24% Similarity=0.161 Sum_probs=45.4
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhccccc
Q 011519 418 RRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKK 480 (484)
Q Consensus 418 ~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 480 (484)
.+|..++..|+|++|+..++++++.+|+++.+++.+|.++..+|++++|+..|+++++++|++
T Consensus 2 ~~a~~~~~~g~~~~A~~~~~~~l~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~a~~~~P~~ 64 (65)
T PF13432_consen 2 ALARALYQQGDYDEAIAAFEQALKQDPDNPEAWYLLGRILYQQGRYDEALAYYERALELDPDN 64 (65)
T ss_dssp HHHHHHHHCTHHHHHHHHHHHHHCCSTTHHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTT-
T ss_pred hHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCC
Confidence 466777777777777777777777777777777777777777777777777777777777654
|
|
| >PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=99.09 E-value=5.5e-10 Score=98.47 Aligned_cols=127 Identities=18% Similarity=0.146 Sum_probs=83.8
Q ss_pred eEEEEEeCCCcEEEEEEecCCCC--c--------------------c----HHHHHHHHHHHhcCCCC--ceeeeeeeee
Q 011519 72 VVYKGKLENQFRIAVKRFNRSAW--P--------------------D----ARQFLEEARAVGQLRNR--RLANLLGCCC 123 (484)
Q Consensus 72 ~Vy~~~~~~~~~vavK~~~~~~~--~--------------------~----~~~~~~E~~~l~~l~hp--niv~l~~~~~ 123 (484)
.||.|...+|..+|||+.+.... . . .....+|.+.|.++..- ++++.+++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 38999988899999998743210 0 0 12356899999999754 567776553
Q ss_pred eCCceEEEEecCC--CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHh-hcCCCcccccccccceeecCCCCceeecc
Q 011519 124 EGDERLLVAEYMP--NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYC-TSKERALYHDLNAYRIVFDDDVNPRLSCF 200 (484)
Q Consensus 124 ~~~~~~lv~Ey~~--~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~l-H~~~~ivH~Dlkp~Nill~~~~~~kl~Df 200 (484)
.-.|||||++ |..+..+.. ..++......++.+++..+..+ |.. |+||+|+.+.|||++++ .+.|+||
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~----~~~~~~~~~~~~~~il~~~~~~~~~~-givHGDLs~~NIlv~~~-~~~iIDf 150 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKD----VDLSPEEPKELLEEILEEIIKMLHKA-GIVHGDLSEYNILVDDG-KVYIIDF 150 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHH----CGGGGSTHHHHHHHHHHHHHHHHHCT-TEEESS-STTSEEEETT-CEEE--G
T ss_pred ---CCEEEEEecCCCccchhhHHh----ccccchhHHHHHHHHHHHHHHHHHhc-CceecCCChhhEEeecc-eEEEEec
Confidence 3389999998 544444322 1122345567788888866664 677 99999999999999977 9999999
Q ss_pred CCccccCC
Q 011519 201 GLMKNSRD 208 (484)
Q Consensus 201 G~a~~~~~ 208 (484)
|.+.....
T Consensus 151 ~qav~~~~ 158 (188)
T PF01163_consen 151 GQAVDSSH 158 (188)
T ss_dssp TTEEETTS
T ss_pred CcceecCC
Confidence 98876543
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A. |
| >COG3063 PilF Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=99.08 E-value=1e-09 Score=96.09 Aligned_cols=100 Identities=14% Similarity=0.013 Sum_probs=95.0
Q ss_pred HHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHH
Q 011519 376 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAA 455 (484)
Q Consensus 376 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 455 (484)
..+....+.|..++++|++..|...+++||+.||+ +..+|.-||..|..+|+.+.|-+.|++|+.++|++.+.+++.|-
T Consensus 33 ~aa~arlqLal~YL~~gd~~~A~~nlekAL~~DPs-~~~a~~~~A~~Yq~~Ge~~~A~e~YrkAlsl~p~~GdVLNNYG~ 111 (250)
T COG3063 33 EAAKARLQLALGYLQQGDYAQAKKNLEKALEHDPS-YYLAHLVRAHYYQKLGENDLADESYRKALSLAPNNGDVLNNYGA 111 (250)
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHcCChhhHHHHHHHHHhcCCCccchhhhhhH
Confidence 34556678999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHhc
Q 011519 456 ALFALGKENEAQAALREASIL 476 (484)
Q Consensus 456 ~~~~~~~~~~A~~~~~~al~l 476 (484)
-++.+|++++|.+.|++|+..
T Consensus 112 FLC~qg~~~eA~q~F~~Al~~ 132 (250)
T COG3063 112 FLCAQGRPEEAMQQFERALAD 132 (250)
T ss_pred HHHhCCChHHHHHHHHHHHhC
Confidence 999999999999999999964
|
|
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=99.08 E-value=8.7e-10 Score=115.91 Aligned_cols=105 Identities=10% Similarity=-0.067 Sum_probs=100.6
Q ss_pred HHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHH
Q 011519 375 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQA 454 (484)
Q Consensus 375 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 454 (484)
+..+..+...|....+.|++++|...++.+++++|+ +..++.+++.++.+++++++|+..+++++..+|+++.+++.+|
T Consensus 83 ~~~~~~~~~La~i~~~~g~~~ea~~~l~~~~~~~Pd-~~~a~~~~a~~L~~~~~~eeA~~~~~~~l~~~p~~~~~~~~~a 161 (694)
T PRK15179 83 PHTELFQVLVARALEAAHRSDEGLAVWRGIHQRFPD-SSEAFILMLRGVKRQQGIEAGRAEIELYFSGGSSSAREILLEA 161 (694)
T ss_pred cccHHHHHHHHHHHHHcCCcHHHHHHHHHHHhhCCC-cHHHHHHHHHHHHHhccHHHHHHHHHHHhhcCCCCHHHHHHHH
Confidence 566888999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHhccccc
Q 011519 455 AALFALGKENEAQAALREASILENKK 480 (484)
Q Consensus 455 ~~~~~~~~~~~A~~~~~~al~l~~~~ 480 (484)
.++.++|++++|++.|+++++-+|+.
T Consensus 162 ~~l~~~g~~~~A~~~y~~~~~~~p~~ 187 (694)
T PRK15179 162 KSWDEIGQSEQADACFERLSRQHPEF 187 (694)
T ss_pred HHHHHhcchHHHHHHHHHHHhcCCCc
Confidence 99999999999999999999977653
|
|
| >PRK10370 formate-dependent nitrite reductase complex subunit NrfG; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.3e-09 Score=97.70 Aligned_cols=91 Identities=15% Similarity=0.123 Sum_probs=85.9
Q ss_pred hccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHH-HHcCC--HHHH
Q 011519 390 RHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAAL-FALGK--ENEA 466 (484)
Q Consensus 390 ~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~-~~~~~--~~~A 466 (484)
..++.++++..++++++.+|+ +..+|.++|.+|..+|++++|+..+++|++++|+++.+++.+|.++ ...|+ +++|
T Consensus 51 ~~~~~~~~i~~l~~~L~~~P~-~~~~w~~Lg~~~~~~g~~~~A~~a~~~Al~l~P~~~~~~~~lA~aL~~~~g~~~~~~A 129 (198)
T PRK10370 51 SQQTPEAQLQALQDKIRANPQ-NSEQWALLGEYYLWRNDYDNALLAYRQALQLRGENAELYAALATVLYYQAGQHMTPQT 129 (198)
T ss_pred CchhHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCCCCcHHH
Confidence 467889999999999999999 9999999999999999999999999999999999999999999985 67788 5999
Q ss_pred HHHHHHHHhcccccc
Q 011519 467 QAALREASILENKKS 481 (484)
Q Consensus 467 ~~~~~~al~l~~~~~ 481 (484)
.+.|++|++++|++.
T Consensus 130 ~~~l~~al~~dP~~~ 144 (198)
T PRK10370 130 REMIDKALALDANEV 144 (198)
T ss_pred HHHHHHHHHhCCCCh
Confidence 999999999999875
|
|
| >KOG2137 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.06 E-value=8.1e-11 Score=118.54 Aligned_cols=148 Identities=21% Similarity=0.275 Sum_probs=105.8
Q ss_pred HHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCCcc-------------cCCCCCCCcccccC
Q 011519 160 VALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY-------------STNLAFTPPEYLRT 226 (484)
Q Consensus 160 i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~-------------~~t~~y~aPE~~~~ 226 (484)
=+.+++.||.|+|+..++||++|.|++|.++.++..||+.|+.+........+ .....|.|||++.+
T Consensus 104 nl~~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~ 183 (700)
T KOG2137|consen 104 NLGNVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG 183 (700)
T ss_pred hhhcccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence 34455699999999889999999999999999999999999987665442211 12357999999998
Q ss_pred CCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHH
Q 011519 227 GRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRS 305 (484)
Q Consensus 227 ~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~ 305 (484)
...++++|+||+|+++|.+.. |+..+............ ...........+..++.++.+=+.+++..++.-||++..
T Consensus 184 ~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~--~~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~~~ 261 (700)
T KOG2137|consen 184 TTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFS--RNLLNAGAFGYSNNLPSELRESLKKLLNGDSAVRPTLDL 261 (700)
T ss_pred ccccccccceeeeeEEEEEecCCcchhhccCCcchhhhh--hcccccccccccccCcHHHHHHHHHHhcCCcccCcchhh
Confidence 888999999999999999994 44333322111111100 000111111234566788999999999999999997776
Q ss_pred HHHH
Q 011519 306 LVTA 309 (484)
Q Consensus 306 il~~ 309 (484)
+...
T Consensus 262 l~~~ 265 (700)
T KOG2137|consen 262 LLSI 265 (700)
T ss_pred hhcc
Confidence 6543
|
|
| >TIGR03302 OM_YfiO outer membrane assembly lipoprotein YfiO | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.1e-09 Score=101.62 Aligned_cols=105 Identities=18% Similarity=0.151 Sum_probs=96.6
Q ss_pred HHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCH---HHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChH---H
Q 011519 376 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSP---TAFARRSLSYLMSDMPQEALNDASQAQVISPVWHM---A 449 (484)
Q Consensus 376 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~---~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~---a 449 (484)
..+..+...|..+++.|+|++|+..|+++++..|. ++ .+++++|.++..+|++++|+..++++++.+|+++. +
T Consensus 31 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~a~~~la~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a 109 (235)
T TIGR03302 31 WPAEELYEEAKEALDSGDYTEAIKYFEALESRYPF-SPYAEQAQLDLAYAYYKSGDYAEAIAAADRFIRLHPNHPDADYA 109 (235)
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-chhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCchHHH
Confidence 45667889999999999999999999999999998 65 57899999999999999999999999999998886 7
Q ss_pred HHHHHHHHHHc--------CCHHHHHHHHHHHHhcccccc
Q 011519 450 AYLQAAALFAL--------GKENEAQAALREASILENKKS 481 (484)
Q Consensus 450 ~~~~g~~~~~~--------~~~~~A~~~~~~al~l~~~~~ 481 (484)
++.+|.++..+ |++++|++.|+++++.+|+..
T Consensus 110 ~~~~g~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~ 149 (235)
T TIGR03302 110 YYLRGLSNYNQIDRVDRDQTAAREAFEAFQELIRRYPNSE 149 (235)
T ss_pred HHHHHHHHHHhcccccCCHHHHHHHHHHHHHHHHHCCCCh
Confidence 99999999987 899999999999999998753
|
Members of this protein family include YfiO, a near-essential protein of the outer membrane, part of a complex involved in protein insertion into the bacterial outer membrane. Many proteins in this family are annotated as ComL, based on the involvement of this protein in natural transformation with exogenous DNA in Neisseria gonorrhoeae. This protein family shows sequence similarity to, but is distinct from, the tol-pal system protein YbgF (TIGR02795). |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 484 | ||||
| 3tl8_A | 349 | The Avrptob-Bak1 Complex Reveals Two Structurally S | 4e-25 | ||
| 3uim_A | 326 | Structural Basis For The Impact Of Phosphorylation | 5e-25 | ||
| 2nry_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 5e-20 | ||
| 2oib_A | 301 | Crystal Structure Of Irak4 Kinase Domain Apo Form L | 7e-20 | ||
| 2nru_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 7e-20 | ||
| 3hgk_A | 327 | Crystal Structure Of Effect Protein Avrptob Complex | 1e-18 | ||
| 2qkw_B | 321 | Structural Basis For Activation Of Plant Immunity B | 3e-18 | ||
| 2o8y_A | 298 | Apo Irak4 Kinase Domain Length = 298 | 6e-18 | ||
| 3k54_A | 283 | Structures Of Human Bruton's Tyrosine Kinase In Act | 1e-13 | ||
| 3oct_A | 265 | Crystal Structure Of Bruton's Tyrosine Kinase Mutan | 1e-13 | ||
| 3pix_A | 274 | Crystal Structure Of Btk Kinase Domain Complexed Wi | 1e-13 | ||
| 3gen_A | 283 | The 1.6 A Crystal Structure Of Human Bruton's Tyros | 1e-13 | ||
| 3p08_A | 267 | Crystal Structure Of The Human Btk Kinase Domain Le | 1e-13 | ||
| 1k2p_A | 263 | Crystal Structure Of Bruton's Tyrosine Kinase Domai | 2e-13 | ||
| 3ocs_A | 271 | Crystal Structure Of Bruton's Tyrosine Kinase In Co | 2e-13 | ||
| 2z8c_A | 303 | Phosphorylated Insulin Receptor Tyrosine Kinase In | 6e-13 | ||
| 1ir3_A | 306 | Phosphorylated Insulin Receptor Tyrosine Kinase In | 8e-13 | ||
| 3eta_A | 317 | Kinase Domain Of Insulin Receptor Complexed With A | 9e-13 | ||
| 1irk_A | 306 | Crystal Structure Of The Tyrosine Kinase Domain Of | 1e-12 | ||
| 1i44_A | 306 | Crystallographic Studies Of An Activation Loop Muta | 1e-12 | ||
| 1rqq_A | 306 | Crystal Structure Of The Insulin Receptor Kinase In | 2e-12 | ||
| 1qpd_A | 279 | Structural Analysis Of The Lymphocyte-specific Kina | 5e-12 | ||
| 3kxz_A | 287 | The Complex Crystal Structure Of Lck With A Probe M | 6e-12 | ||
| 2pl0_A | 289 | Lck Bound To Imatinib Length = 289 | 6e-12 | ||
| 3kmm_A | 288 | Structure Of Human Lck Kinase With A Small Molecule | 7e-12 | ||
| 2zm1_A | 285 | Crystal Structure Of Imidazo Pyrazin 1 Bound To The | 8e-12 | ||
| 1qpe_A | 279 | Structural Analysis Of The Lymphocyte-Specific Kina | 8e-12 | ||
| 2ofv_A | 277 | Crystal Structure Of Aminoquinazoline 1 Bound To Lc | 8e-12 | ||
| 1byg_A | 278 | Kinase Domain Of Human C-Terminal Src Kinase (Csk) | 9e-12 | ||
| 3ekk_A | 307 | Insulin Receptor Kinase Complexed With An Inhibitor | 9e-12 | ||
| 1p14_A | 306 | Crystal Structure Of A Catalytic-Loop Mutant Of The | 9e-12 | ||
| 3bys_A | 277 | Co-Crystal Structure Of Lck And Aminopyrimidine Ami | 9e-12 | ||
| 3bym_A | 272 | X-Ray Co-Crystal Structure Aminobenzimidazole Triaz | 1e-11 | ||
| 2ofu_A | 273 | X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam | 1e-11 | ||
| 2og8_A | 265 | Crystal Structure Of Aminoquinazoline 36 Bound To L | 1e-11 | ||
| 3d7u_A | 263 | Structural Basis For The Recognition Of C-Src By It | 1e-11 | ||
| 1k9a_A | 450 | Crystal Structure Analysis Of Full-Length Carboxyl- | 1e-11 | ||
| 3lck_A | 271 | The Kinase Domain Of Human Lymphocyte Kinase (Lck), | 1e-11 | ||
| 2of2_A | 271 | Crystal Structure Of Furanopyrimidine 8 Bound To Lc | 1e-11 | ||
| 3d7t_A | 269 | Structural Basis For The Recognition Of C-Src By It | 2e-11 | ||
| 2zm3_A | 308 | Complex Structure Of Insulin-Like Growth Factor Rec | 2e-11 | ||
| 3mpm_A | 267 | Lck Complexed With A Pyrazolopyrimidine Length = 26 | 3e-11 | ||
| 3i81_A | 315 | Crystal Structure Of Insulin-Like Growth Factor 1 R | 3e-11 | ||
| 1jqh_A | 308 | Igf-1 Receptor Kinase Domain Length = 308 | 4e-11 | ||
| 3o23_A | 305 | Human Unphosphorylated Igf1-R Kinase Domain In Comp | 4e-11 | ||
| 1k3a_A | 299 | Structure Of The Insulin-Like Growth Factor 1 Recep | 4e-11 | ||
| 3qqu_A | 301 | Cocrystal Structure Of Unphosphorylated Igf With Py | 4e-11 | ||
| 2oj9_A | 307 | Structure Of Igf-1r Kinase Domain Complexed With A | 4e-11 | ||
| 1m7n_A | 322 | Crystal Structure Of Unactivated Apo Insulin-Like G | 4e-11 | ||
| 3dk3_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 7e-11 | ||
| 3lvp_A | 336 | Crystal Structure Of Bisphosphorylated Igf1-R Kinas | 8e-11 | ||
| 3lw0_A | 304 | Igf-1rk In Complex With Ligand Msc1609119a-1 Length | 8e-11 | ||
| 1p4o_A | 322 | Structure Of Apo Unactivated Igf-1r Kinase Domain A | 8e-11 | ||
| 3d94_A | 301 | Crystal Structure Of The Insulin-Like Growth Factor | 1e-10 | ||
| 3dk6_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 1e-10 | ||
| 3dk7_A | 277 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 3e-10 | ||
| 3oxz_A | 284 | Crystal Structure Of Abl Kinase Domain Bound With A | 3e-10 | ||
| 1fpu_A | 293 | Crystal Structure Of Abl Kinase Domain In Complex W | 3e-10 | ||
| 2e2b_A | 293 | Crystal Structure Of The C-Abl Kinase Domain In Com | 4e-10 | ||
| 2hiw_A | 287 | Crystal Structure Of Inactive Conformation Abl Kina | 4e-10 | ||
| 2qoh_A | 288 | Crystal Structure Of Abl Kinase Bound With Ppy-a Le | 4e-10 | ||
| 2g1t_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 4e-10 | ||
| 3pyy_A | 298 | Discovery And Characterization Of A Cell-Permeable, | 4e-10 | ||
| 3cd3_A | 377 | Crystal Structure Of Phosphorylated Human Feline Sa | 4e-10 | ||
| 3oy3_A | 284 | Crystal Structure Of Abl T315i Mutant Kinase Domain | 4e-10 | ||
| 2z60_A | 288 | Crystal Structure Of The T315i Mutant Of Abl Kinase | 5e-10 | ||
| 3bkb_A | 377 | Crystal Structure Of Human Feline Sarcoma Viral Onc | 5e-10 | ||
| 2g2f_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 8e-10 | ||
| 2f4j_A | 287 | Structure Of The Kinase Domain Of An Imatinib-Resis | 8e-10 | ||
| 2h8h_A | 535 | Src Kinase In Complex With A Quinazoline Inhibitor | 1e-09 | ||
| 3miy_A | 266 | X-Ray Crystal Structure Of Itk Complexed With Sunit | 1e-09 | ||
| 4fvp_A | 289 | Crystal Structure Of The Jak2 Pseudokinase Domain ( | 1e-09 | ||
| 2hzi_A | 277 | Abl Kinase Domain In Complex With Pd180970 Length = | 2e-09 | ||
| 1yi6_A | 276 | C-Term Tail Segment Of Human Tyrosine Kinase (258-5 | 2e-09 | ||
| 3t9t_A | 267 | Crystal Structure Of Btk Mutant (F435t,K596r) Compl | 2e-09 | ||
| 1ksw_A | 452 | Structure Of Human C-Src Tyrosine Kinase (Thr338gly | 2e-09 | ||
| 2bdf_A | 279 | Src Kinase In Complex With Inhibitor Ap23451 Length | 2e-09 | ||
| 2dq7_X | 283 | Crystal Structure Of Fyn Kinase Domain Complexed Wi | 2e-09 | ||
| 2hyy_A | 273 | Human Abl Kinase Domain In Complex With Imatinib (S | 2e-09 | ||
| 1y57_A | 452 | Structure Of Unphosphorylated C-Src In Complex With | 2e-09 | ||
| 1fmk_A | 452 | Crystal Structure Of Human Tyrosine-Protein Kinase | 2e-09 | ||
| 4asz_A | 299 | Crystal Structure Of Apo Trkb Kinase Domain Length | 2e-09 | ||
| 4hct_A | 269 | Crystal Structure Of Itk In Complex With Compound 5 | 2e-09 | ||
| 4fvr_A | 289 | Crystal Structure Of The Jak2 Pseudokinase Domain M | 2e-09 | ||
| 1sm2_A | 264 | Crystal Structure Of The Phosphorylated Interleukin | 2e-09 | ||
| 3qri_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain I | 2e-09 | ||
| 3v5j_A | 266 | Crystal Structure Of Interleukin-2 Inducible T-Cell | 2e-09 | ||
| 1opk_A | 495 | Structural Basis For The Auto-Inhibition Of C-Abl T | 2e-09 | ||
| 2fo0_A | 495 | Organization Of The Sh3-Sh2 Unit In Active And Inac | 2e-09 | ||
| 3gvu_A | 292 | The Crystal Structure Of Human Abl2 In Complex With | 2e-09 | ||
| 1opl_A | 537 | Structural Basis For The Auto-Inhibition Of C-Abl T | 3e-09 | ||
| 2hz0_A | 270 | Abl Kinase Domain In Complex With Nvp-Aeg082 Length | 3e-09 | ||
| 2v7a_A | 286 | Crystal Structure Of The T315i Abl Mutant In Comple | 3e-09 | ||
| 3qrj_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain T | 3e-09 | ||
| 1yoj_A | 283 | Crystal Structure Of Src Kinase Domain Length = 283 | 5e-09 | ||
| 1yol_A | 283 | Crystal Structure Of Src Kinase Domain In Complex W | 5e-09 | ||
| 2oiq_A | 286 | Crystal Structure Of Chicken C-Src Kinase Domain In | 6e-09 | ||
| 3svv_A | 286 | Crystal Structure Of T338c C-Src Covalently Bound T | 6e-09 | ||
| 3qgw_A | 286 | Crystal Structure Of Itk Kinase Bound To An Inhibit | 7e-09 | ||
| 3d7u_B | 277 | Structural Basis For The Recognition Of C-Src By It | 7e-09 | ||
| 3dqw_A | 286 | C-Src Kinase Domain Thr338ile Mutant In Complex Wit | 7e-09 | ||
| 3geq_A | 286 | Structural Basis For The Chemical Rescue Of Src Kin | 7e-09 | ||
| 3g6h_A | 286 | Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma | 7e-09 | ||
| 3sxr_A | 268 | Crystal Structure Of Bmx Non-Receptor Tyrosine Kina | 7e-09 | ||
| 3u4w_A | 275 | Src In Complex With Dna-Templated Macrocyclic Inhib | 7e-09 | ||
| 2zv7_A | 279 | Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | 8e-09 | ||
| 3a4o_X | 286 | Lyn Kinase Domain Length = 286 | 9e-09 | ||
| 2gqg_A | 278 | X-Ray Crystal Structure Of Dasatinib (Bms-354825) B | 9e-09 | ||
| 3oez_A | 286 | Crystal Structure Of The L317i Mutant Of The Chicke | 1e-08 | ||
| 2hwo_A | 286 | Crystal Structure Of Src Kinase Domain In Complex W | 1e-08 | ||
| 2ptk_A | 453 | Chicken Src Tyrosine Kinase Length = 453 | 1e-08 | ||
| 2qq7_A | 286 | Crystal Structure Of Drug Resistant Src Kinase Doma | 2e-08 | ||
| 2g15_A | 318 | Structural Characterization Of Autoinhibited C-Met | 2e-08 | ||
| 2rfn_A | 310 | X-ray Structure Of C-met With Inhibitor. Length = 3 | 2e-08 | ||
| 3i5n_A | 309 | Crystal Structure Of C-Met With Triazolopyridazine | 2e-08 | ||
| 3q6u_A | 308 | Structure Of The Apo Met Receptor Kinase In The Dua | 2e-08 | ||
| 3lq8_A | 302 | Structure Of The Kinase Domain Of C-Met Bound To Xl | 3e-08 | ||
| 2wgj_A | 306 | X-Ray Structure Of Pf-02341066 Bound To The Kinase | 3e-08 | ||
| 4gg5_A | 319 | Crystal Structure Of Cmet In Complex With Novel Inh | 3e-08 | ||
| 3f66_A | 298 | Human C-Met Kinase In Complex With Quinoxaline Inhi | 3e-08 | ||
| 2wd1_A | 292 | Human C-Met Kinase In Complex With Azaindole Inhibi | 3e-08 | ||
| 3v5q_A | 297 | Discovery Of A Selective Trk Inhibitor With Efficac | 4e-08 | ||
| 3pls_A | 298 | Ron In Complex With Ligand Amp-Pnp Length = 298 | 7e-08 | ||
| 1luf_A | 343 | Crystal Structure Of The Musk Tyrosine Kinase: Insi | 1e-07 | ||
| 3nyx_A | 302 | Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T | 2e-07 | ||
| 2ivs_A | 314 | Crystal Structure Of Non-Phosphorylated Ret Tyrosin | 3e-07 | ||
| 3nz0_A | 302 | Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3 | 4e-07 | ||
| 3ugc_A | 295 | Structural Basis Of Jak2 Inhibition By The Type Ii | 4e-07 | ||
| 4bbe_A | 298 | Aminoalkylpyrimidine Inhibitor Complexes With Jak2 | 6e-07 | ||
| 3lxn_A | 318 | Structural And Thermodynamic Characterization Of Th | 1e-06 | ||
| 2w1i_A | 326 | Structure Determination Of Aurora Kinase In Complex | 1e-06 | ||
| 4e4m_A | 302 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 3 | 1e-06 | ||
| 3io7_A | 313 | 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel | 1e-06 | ||
| 4aqc_A | 301 | Triazolopyridine-Based Inhibitor Of Janus Kinase 2 | 1e-06 | ||
| 4hge_A | 300 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 | 1e-06 | ||
| 2xa4_A | 298 | Inhibitors Of Jak2 Kinase Domain Length = 298 | 1e-06 | ||
| 3lpb_A | 295 | Crystal Structure Of Jak2 Complexed With A Potent 2 | 2e-06 | ||
| 2b7a_A | 293 | The Structural Basis Of Janus Kinase 2 Inhibition B | 2e-06 | ||
| 3jy9_A | 311 | Janus Kinase 2 Inhibitors Length = 311 | 2e-06 | ||
| 3tjc_A | 298 | Co-Crystal Structure Of Jak2 With Thienopyridine 8 | 2e-06 | ||
| 3q32_A | 301 | Structure Of Janus Kinase 2 With A Pyrrolotriazine | 2e-06 | ||
| 3rvg_A | 303 | Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido | 2e-06 | ||
| 1qcf_A | 454 | Crystal Structure Of Hck In Complex With A Src Fami | 2e-06 | ||
| 1mqb_A | 333 | Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro | 2e-06 | ||
| 3e62_A | 293 | Fragment Based Discovery Of Jak-2 Inhibitors Length | 2e-06 | ||
| 3dzq_A | 361 | Human Epha3 Kinase Domain In Complex With Inhibitor | 2e-06 | ||
| 2ivv_A | 314 | Crystal Structure Of Phosphorylated Ret Tyrosine Ki | 2e-06 | ||
| 2qok_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 2e-06 | ||
| 2qoc_A | 344 | Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp | 2e-06 | ||
| 2ivt_A | 314 | Crystal Structure Of Phosphorylated Ret Tyrosine Ki | 2e-06 | ||
| 2gsf_A | 373 | The Human Epha3 Receptor Tyrosine Kinase And Juxtam | 3e-06 | ||
| 2qof_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f | 3e-06 | ||
| 2qod_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y602f | 3e-06 | ||
| 2qoi_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 3e-06 | ||
| 2qoo_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 3e-06 | ||
| 3fxx_A | 371 | Human Epha3 Kinase And Juxtamembrane Region Bound T | 3e-06 | ||
| 1ad5_A | 438 | Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | 3e-06 | ||
| 2yjr_A | 342 | Structure Of F1174l Mutant Anaplastic Lymphoma Kina | 3e-06 | ||
| 2hk5_A | 270 | Hck Kinase In Complex With Lck Targetted Inhibitor | 3e-06 | ||
| 2qol_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596:y | 3e-06 | ||
| 4e6d_A | 298 | Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W | 3e-06 | ||
| 4fnw_A | 327 | Crystal Structure Of The Apo F1174l Anaplastic Lymp | 4e-06 | ||
| 3kxx_A | 317 | Structure Of The Mutant Fibroblast Growth Factor Re | 4e-06 | ||
| 2yfx_A | 327 | Structure Of L1196m Mutant Anaplastic Lymphoma Kina | 5e-06 | ||
| 4f0f_A | 287 | Crystal Structure Of The Roco4 Kinase Domain Bound | 6e-06 | ||
| 2qon_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 6e-06 | ||
| 2yhv_A | 342 | Structure Of L1196m Mutant Anaplastic Lymphoma Kina | 6e-06 | ||
| 2xp2_A | 327 | Structure Of The Human Anaplastic Lymphoma Kinase I | 6e-06 | ||
| 4aoj_A | 329 | Human Trka In Complex With The Inhibitor Az-23 Leng | 7e-06 | ||
| 2xb7_A | 315 | Structure Of Human Anaplastic Lymphoma Kinase In Co | 7e-06 | ||
| 3lct_A | 344 | Crystal Structure Of The Anaplastic Lymphoma Kinase | 7e-06 | ||
| 3aox_A | 344 | X-Ray Crystal Structure Of Human Anaplastic Lymphom | 9e-06 | ||
| 4fnz_A | 327 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 9e-06 | ||
| 3l9p_A | 367 | Crystal Structure Of The Anaplastic Lymphoma Kinase | 1e-05 | ||
| 2yjs_A | 342 | Structure Of C1156y Mutant Anaplastic Lymphoma Kina | 1e-05 | ||
| 4e20_A | 290 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 1e-05 | ||
| 4dce_A | 333 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 1e-05 | ||
| 4e1z_A | 291 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 1e-05 | ||
| 3gqi_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 1e-05 | ||
| 4f0i_A | 300 | Crystal Structure Of Apo Trka Length = 300 | 1e-05 | ||
| 4gt5_A | 306 | Crystal Structure Of The Inactive Trka Kinase Domai | 1e-05 | ||
| 4fob_A | 353 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 1e-05 | ||
| 4fnx_A | 327 | Crystal Structure Of The Apo R1275q Anaplastic Lymp | 2e-05 | ||
| 4f63_A | 309 | Crystal Structure Of Human Fibroblast Growth Factor | 2e-05 | ||
| 3tt0_A | 382 | Co-Structure Of Fibroblast Growth Factor Receptor 1 | 2e-05 | ||
| 2rei_A | 318 | Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep | 2e-05 | ||
| 3js2_A | 317 | Crystal Structure Of Minimal Kinase Domain Of Fibro | 2e-05 | ||
| 3ppz_A | 309 | Crystal Structure Of Ctr1 Kinase Domain In Complex | 2e-05 | ||
| 3gql_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 2e-05 | ||
| 2qob_A | 344 | Human Epha3 Kinase Domain, Base Structure Length = | 2e-05 | ||
| 1fgk_A | 310 | Crystal Structure Of The Tyrosine Kinase Domain Of | 2e-05 | ||
| 3rhx_B | 306 | Crystal Structure Of The Catalytic Domain Of Fgfr1 | 2e-05 | ||
| 3c4f_A | 302 | Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M | 2e-05 | ||
| 2qo7_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Dephos | 2e-05 | ||
| 2ogv_A | 317 | Crystal Structure Of The Autoinhibited Human C-Fms | 2e-05 | ||
| 1jpa_A | 312 | Crystal Structure Of Unphosphorylated Ephb2 Recepto | 3e-05 | ||
| 4f1o_A | 287 | Crystal Structure Of The L1180t Mutant Roco4 Kinase | 3e-05 | ||
| 2p0c_A | 313 | Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro | 3e-05 | ||
| 2r4b_A | 321 | Erbb4 Kinase Domain Complexed With A Thienopyrimidi | 3e-05 | ||
| 2pzr_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 3e-05 | ||
| 3lcd_A | 329 | Inhibitor Bound To A Dfg-In Structure Of The Kinase | 3e-05 | ||
| 3kul_A | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 3e-05 | ||
| 3bbt_B | 328 | Crystal Structure Of The Erbb4 Kinase In Complex Wi | 4e-05 | ||
| 4f1m_A | 287 | Crystal Structure Of The G1179s Roco4 Kinase Domain | 4e-05 | ||
| 3cly_A | 334 | Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase | 4e-05 | ||
| 2hel_A | 306 | Crystal Structure Of A Mutant Epha4 Kinase Domain ( | 5e-05 | ||
| 2acx_A | 576 | Crystal Structure Of G Protein Coupled Receptor Kin | 5e-05 | ||
| 3nyn_A | 576 | Crystal Structure Of G Protein-Coupled Receptor Kin | 5e-05 | ||
| 3b2t_A | 311 | Structure Of Phosphotransferase Length = 311 | 5e-05 | ||
| 2r2p_A | 295 | Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep | 5e-05 | ||
| 1gjo_A | 316 | The Fgfr2 Tyrosine Kinase Domain Length = 316 | 6e-05 | ||
| 3cc6_A | 281 | Crystal Structure Of Kinase Domain Of Protein Tyros | 6e-05 | ||
| 3p86_A | 309 | Crystal Structure Of Ctr1 Kinase Domain Mutant D676 | 6e-05 | ||
| 3ri1_A | 313 | Crystal Structure Of The Catalytic Domain Of Fgfr2 | 6e-05 | ||
| 3kul_B | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 6e-05 | ||
| 3zgw_A | 347 | Crystal Structure Of Maternal Embryonic Leucine Zip | 6e-05 | ||
| 2pzp_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 6e-05 | ||
| 4h1j_A | 293 | Crystal Structure Of Pyk2 With The Pyrazole 13a Len | 6e-05 | ||
| 3q52_A | 306 | Structure Of Phosphorylated Pak1 Kinase Domain Leng | 6e-05 | ||
| 1f3m_C | 297 | Crystal Structure Of Human SerineTHREONINE KINASE P | 7e-05 | ||
| 3fzo_A | 277 | Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin | 7e-05 | ||
| 1yhv_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Two Po | 7e-05 | ||
| 2pvy_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 7e-05 | ||
| 3s95_A | 310 | Crystal Structure Of The Human Limk1 Kinase Domain | 8e-05 | ||
| 3bea_A | 333 | Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P | 8e-05 | ||
| 3fxz_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Ruthen | 9e-05 | ||
| 2pvf_A | 334 | Crystal Structure Of Tyrosine Phosphorylated Activa | 9e-05 | ||
| 2psq_A | 370 | Crystal Structure Of Unphosphorylated Unactivated W | 1e-04 | ||
| 3kmw_A | 271 | Crystal Structure Of The IlkALPHA-Parvin Core Compl | 1e-04 | ||
| 3q4z_A | 306 | Structure Of Unphosphorylated Pak1 Kinase Domain Le | 2e-04 | ||
| 2xyu_A | 285 | Crystal Structure Of Epha4 Kinase Domain In Complex | 2e-04 | ||
| 2i1m_A | 333 | Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An | 2e-04 | ||
| 2y6m_A | 291 | Crystal Structure Of Epha4 Kinase Domain Length = 2 | 2e-04 | ||
| 2vwi_A | 303 | Structure Of The Osr1 Kinase, A Hypertension Drug T | 2e-04 | ||
| 3lco_A | 324 | Inhibitor Bound To A Dfg-Out Structure Of The Kinas | 2e-04 | ||
| 2hen_A | 286 | Crystal Structure Of The Ephb2 Receptor Kinase Doma | 2e-04 | ||
| 3dak_A | 290 | Crystal Structure Of Domain-Swapped Osr1 Kinase Dom | 2e-04 | ||
| 3hyh_A | 275 | Crystal Structure Of The Protein Kinase Domain Of Y | 3e-04 | ||
| 3dae_A | 283 | Crystal Structure Of Phosphorylated Snf1 Kinase Dom | 3e-04 | ||
| 2pwl_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 3e-04 | ||
| 2i0v_A | 335 | C-Fms Tyrosine Kinase In Complex With A Quinolone I | 3e-04 | ||
| 3mn3_A | 271 | An Inhibited Conformation For The Protein Kinase Do | 3e-04 | ||
| 2q0b_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 3e-04 | ||
| 2pz5_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 3e-04 | ||
| 2fh9_A | 274 | Structure And Dimerization Of The Kinase Domain Fro | 3e-04 | ||
| 2py3_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 4e-04 | ||
| 4gt4_A | 308 | Structure Of Unliganded, Inactive Ror2 Kinase Domai | 4e-04 | ||
| 3zzw_A | 289 | Crystal Structure Of The Kinase Domain Of Ror2 Leng | 4e-04 | ||
| 2qnj_A | 328 | Kinase And Ubiquitin-Associated Domains Of Mark3PAR | 5e-04 | ||
| 4aw5_A | 291 | Complex Of The Ephb4 Kinase Domain With An Oxindole | 5e-04 | ||
| 3uiu_A | 306 | Crystal Structure Of Apo-Pkr Kinase Domain Length = | 7e-04 | ||
| 2h6d_A | 276 | Protein Kinase Domain Of The Human 5'-Amp-Activated | 7e-04 | ||
| 2hak_A | 328 | Catalytic And Ubiqutin-Associated Domains Of Mark1P | 8e-04 | ||
| 2vwu_A | 302 | Ephb4 Kinase Domain Inhibitor Complex Length = 302 | 9e-04 |
| >pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349 | Back alignment and structure |
|
| >pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326 | Back alignment and structure |
|
| >pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301 | Back alignment and structure |
|
| >pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327 | Back alignment and structure |
|
| >pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321 | Back alignment and structure |
|
| >pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283 | Back alignment and structure |
|
| >pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265 | Back alignment and structure |
|
| >pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274 | Back alignment and structure |
|
| >pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283 | Back alignment and structure |
|
| >pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267 | Back alignment and structure |
|
| >pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263 | Back alignment and structure |
|
| >pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271 | Back alignment and structure |
|
| >pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303 | Back alignment and structure |
|
| >pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306 | Back alignment and structure |
|
| >pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317 | Back alignment and structure |
|
| >pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306 | Back alignment and structure |
|
| >pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306 | Back alignment and structure |
|
| >pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306 | Back alignment and structure |
|
| >pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287 | Back alignment and structure |
|
| >pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289 | Back alignment and structure |
|
| >pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288 | Back alignment and structure |
|
| >pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285 | Back alignment and structure |
|
| >pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277 | Back alignment and structure |
|
| >pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278 | Back alignment and structure |
|
| >pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306 | Back alignment and structure |
|
| >pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277 | Back alignment and structure |
|
| >pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272 | Back alignment and structure |
|
| >pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273 | Back alignment and structure |
|
| >pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265 | Back alignment and structure |
|
| >pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263 | Back alignment and structure |
|
| >pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450 | Back alignment and structure |
|
| >pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271 | Back alignment and structure |
|
| >pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271 | Back alignment and structure |
|
| >pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269 | Back alignment and structure |
|
| >pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308 | Back alignment and structure |
|
| >pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267 | Back alignment and structure |
|
| >pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315 | Back alignment and structure |
|
| >pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308 | Back alignment and structure |
|
| >pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305 | Back alignment and structure |
|
| >pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299 | Back alignment and structure |
|
| >pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301 | Back alignment and structure |
|
| >pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322 | Back alignment and structure |
|
| >pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336 | Back alignment and structure |
|
| >pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304 | Back alignment and structure |
|
| >pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322 | Back alignment and structure |
|
| >pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301 | Back alignment and structure |
|
| >pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277 | Back alignment and structure |
|
| >pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284 | Back alignment and structure |
|
| >pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293 | Back alignment and structure |
|
| >pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288 | Back alignment and structure |
|
| >pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298 | Back alignment and structure |
|
| >pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377 | Back alignment and structure |
|
| >pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284 | Back alignment and structure |
|
| >pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288 | Back alignment and structure |
|
| >pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377 | Back alignment and structure |
|
| >pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287 | Back alignment and structure |
|
| >pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535 | Back alignment and structure |
|
| >pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266 | Back alignment and structure |
|
| >pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo Form) Length = 289 | Back alignment and structure |
|
| >pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277 | Back alignment and structure |
|
| >pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276 | Back alignment and structure |
|
| >pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267 | Back alignment and structure |
|
| >pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452 | Back alignment and structure |
|
| >pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279 | Back alignment and structure |
|
| >pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283 | Back alignment and structure |
|
| >pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273 | Back alignment and structure |
|
| >pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452 | Back alignment and structure |
|
| >pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452 | Back alignment and structure |
|
| >pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299 | Back alignment and structure |
|
| >pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269 | Back alignment and structure |
|
| >pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant V617f (Mg- Atp-Bound Form) Length = 289 | Back alignment and structure |
|
| >pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264 | Back alignment and structure |
|
| >pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277 | Back alignment and structure |
|
| >pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266 | Back alignment and structure |
|
| >pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495 | Back alignment and structure |
|
| >pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292 | Back alignment and structure |
|
| >pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537 | Back alignment and structure |
|
| >pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270 | Back alignment and structure |
|
| >pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286 | Back alignment and structure |
|
| >pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277 | Back alignment and structure |
|
| >pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283 | Back alignment and structure |
|
| >pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286 | Back alignment and structure |
|
| >pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286 | Back alignment and structure |
|
| >pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277 | Back alignment and structure |
|
| >pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286 | Back alignment and structure |
|
| >pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286 | Back alignment and structure |
|
| >pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286 | Back alignment and structure |
|
| >pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268 | Back alignment and structure |
|
| >pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275 | Back alignment and structure |
|
| >pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | Back alignment and structure |
|
| >pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286 | Back alignment and structure |
|
| >pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278 | Back alignment and structure |
|
| >pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286 | Back alignment and structure |
|
| >pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453 | Back alignment and structure |
|
| >pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318 | Back alignment and structure |
|
| >pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310 | Back alignment and structure |
|
| >pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309 | Back alignment and structure |
|
| >pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308 | Back alignment and structure |
|
| >pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302 | Back alignment and structure |
|
| >pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306 | Back alignment and structure |
|
| >pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319 | Back alignment and structure |
|
| >pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292 | Back alignment and structure |
|
| >pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297 | Back alignment and structure |
|
| >pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298 | Back alignment and structure |
|
| >pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343 | Back alignment and structure |
|
| >pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314 | Back alignment and structure |
|
| >pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302 | Back alignment and structure |
|
| >pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295 | Back alignment and structure |
|
| >pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298 | Back alignment and structure |
|
| >pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318 | Back alignment and structure |
|
| >pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313 | Back alignment and structure |
|
| >pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301 | Back alignment and structure |
|
| >pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300 | Back alignment and structure |
|
| >pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295 | Back alignment and structure |
|
| >pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311 | Back alignment and structure |
|
| >pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298 | Back alignment and structure |
|
| >pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303 | Back alignment and structure |
|
| >pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454 | Back alignment and structure |
|
| >pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333 | Back alignment and structure |
|
| >pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293 | Back alignment and structure |
|
| >pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361 | Back alignment and structure |
|
| >pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314 | Back alignment and structure |
|
| >pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344 | Back alignment and structure |
|
| >pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314 | Back alignment and structure |
|
| >pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373 | Back alignment and structure |
|
| >pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371 | Back alignment and structure |
|
| >pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | Back alignment and structure |
|
| >pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270 | Back alignment and structure |
|
| >pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298 | Back alignment and structure |
|
| >pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327 | Back alignment and structure |
|
| >pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317 | Back alignment and structure |
|
| >pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327 | Back alignment and structure |
|
| >pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327 | Back alignment and structure |
|
| >pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329 | Back alignment and structure |
|
| >pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315 | Back alignment and structure |
|
| >pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344 | Back alignment and structure |
|
| >pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344 | Back alignment and structure |
|
| >pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327 | Back alignment and structure |
|
| >pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367 | Back alignment and structure |
|
| >pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290 | Back alignment and structure |
|
| >pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300 | Back alignment and structure |
|
| >pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353 | Back alignment and structure |
|
| >pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327 | Back alignment and structure |
|
| >pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309 | Back alignment and structure |
|
| >pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382 | Back alignment and structure |
|
| >pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318 | Back alignment and structure |
|
| >pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317 | Back alignment and structure |
|
| >pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344 | Back alignment and structure |
|
| >pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310 | Back alignment and structure |
|
| >pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306 | Back alignment and structure |
|
| >pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302 | Back alignment and structure |
|
| >pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373 | Back alignment and structure |
|
| >pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317 | Back alignment and structure |
|
| >pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312 | Back alignment and structure |
|
| >pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287 | Back alignment and structure |
|
| >pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313 | Back alignment and structure |
|
| >pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321 | Back alignment and structure |
|
| >pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329 | Back alignment and structure |
|
| >pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328 | Back alignment and structure |
|
| >pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334 | Back alignment and structure |
|
| >pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306 | Back alignment and structure |
|
| >pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576 | Back alignment and structure |
|
| >pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576 | Back alignment and structure |
|
| >pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311 | Back alignment and structure |
|
| >pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295 | Back alignment and structure |
|
| >pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281 | Back alignment and structure |
|
| >pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313 | Back alignment and structure |
|
| >pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293 | Back alignment and structure |
|
| >pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297 | Back alignment and structure |
|
| >pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277 | Back alignment and structure |
|
| >pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297 | Back alignment and structure |
|
| >pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310 | Back alignment and structure |
|
| >pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297 | Back alignment and structure |
|
| >pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334 | Back alignment and structure |
|
| >pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370 | Back alignment and structure |
|
| >pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Mgatp) Length = 271 | Back alignment and structure |
|
| >pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285 | Back alignment and structure |
|
| >pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291 | Back alignment and structure |
|
| >pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303 | Back alignment and structure |
|
| >pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324 | Back alignment and structure |
|
| >pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286 | Back alignment and structure |
|
| >pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290 | Back alignment and structure |
|
| >pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275 | Back alignment and structure |
|
| >pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335 | Back alignment and structure |
|
| >pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271 | Back alignment and structure |
|
| >pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274 | Back alignment and structure |
|
| >pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308 | Back alignment and structure |
|
| >pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289 | Back alignment and structure |
|
| >pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276 | Back alignment and structure |
|
| >pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 199 bits (509), Expect = 3e-60
Identities = 87/310 (28%), Positives = 141/310 (45%), Gaps = 31/310 (10%)
Query: 26 DVENEEKPGVD--NVPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFR 83
DV EE P V + F S+ L+ A+ F+ +NI+ G VYKG+L +
Sbjct: 3 DVPAEEDPEVHLGQLKRF---SLRELQVASDNFSNKNIL---GRGGFGKVYKGRLADGTL 56
Query: 84 IAVKRFNR-SAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAK 142
+AVKR QF E + +R L L G C ERLLV YM N ++A
Sbjct: 57 VAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVAS 116
Query: 143 HLF--HWETQPMKWAMRLRVALHIAEALEY--CTSKERALYHDLNAYRIVFDDDVNPRLS 198
L P+ W R R+AL A L Y + ++ D+ A I+ D++ +
Sbjct: 117 CLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVG 176
Query: 199 CFGLMKNSRDGRSY-STNLAFT----PPEYLRTGRVTPESVMYSFGTLLLDLLSGK---- 249
FGL K ++ +T + T PEYL TG+ + ++ ++ +G +LL+L++G+
Sbjct: 177 DFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 236
Query: 250 -HIPP--------SHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
L++++ ++ L D L+G + +E +L+++A C Q P ER
Sbjct: 237 LARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMER 296
Query: 301 PNPRSLVTAL 310
P +V L
Sbjct: 297 PKMSEVVRML 306
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 195 bits (499), Expect = 4e-59
Identities = 81/318 (25%), Positives = 140/318 (44%), Gaps = 44/318 (13%)
Query: 28 ENEEKPGVD-NVPVFCEYSIETLRTATSGFAMENIVSEH---GEKAPNVVYKGKLENQFR 83
EN+ D F S L+ T+ F I GE VVYKG + N
Sbjct: 1 ENKSLEVSDTRFHSF---SFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNT-T 56
Query: 84 IAVKRFNRSAWPDA----RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT 139
+AVK+ +QF +E + + + ++ L LLG +GD+ LV YMPN +
Sbjct: 57 VAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGS 116
Query: 140 LAKHLFHWE-TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR------IVFDDD 192
L L + T P+ W MR ++A A + + L+ + + +R I+ D+
Sbjct: 117 LLDRLSCLDGTPPLSWHMRCKIAQGAANGINF-------LHENHHIHRDIKSANILLDEA 169
Query: 193 VNPRLSCFGLMK-NSRDGRSY-STNLAFTP----PEYLRTGRVTPESVMYSFGTLLLDLL 246
++S FGL + + + ++ ++ + T PE L G +TP+S +YSFG +LL+++
Sbjct: 170 FTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEAL-RGEITPKSDIYSFGVVLLEII 228
Query: 247 SGK-----HIPPSHALD-----LIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYE 296
+G H P LD ++ I+ D + S + +AS+CL +
Sbjct: 229 TGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEK 287
Query: 297 PRERPNPRSLVTALVTLQ 314
+RP+ + + L +
Sbjct: 288 KNKRPDIKKVQQLLQEMT 305
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 192 bits (490), Expect = 2e-57
Identities = 78/317 (24%), Positives = 140/317 (44%), Gaps = 28/317 (8%)
Query: 14 GSEYGEAAPEAQDVENEEKPGVDNVPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVV 73
GS+Y +A D + + L AT+ F + ++ G V
Sbjct: 2 GSKYSKATNSINDALSSSYLVPFESYRV---PLVDLEEATNNFDHKFLI---GHGVFGKV 55
Query: 74 YKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133
YKG L + ++A+KR + +F E + R+ L +L+G C E +E +L+ +
Sbjct: 56 YKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYK 115
Query: 134 YMPNDTLAKHLF--HWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 190
YM N L +HL+ T M W RL + + A L Y RA+ H D+ + I+ D
Sbjct: 116 YMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYL--HTRAIIHRDVKSINILLD 173
Query: 191 DDVNPRLSCFGLMK-NSRDGRSY-STNLAFTP----PEYLRTGRVTPESVMYSFGTLLLD 244
++ P+++ FG+ K + +++ ST + T PEY GR+T +S +YSFG +L +
Sbjct: 174 ENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFE 233
Query: 245 LLSGK----HIPPSH-------ALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 293
+L + P A++ + ++ + D L + + + A +CL
Sbjct: 234 VLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCL 293
Query: 294 QYEPRERPNPRSLVTAL 310
+RP+ ++ L
Sbjct: 294 ALSSEDRPSMGDVLWKL 310
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 2e-25
Identities = 48/262 (18%), Positives = 95/262 (36%), Gaps = 34/262 (12%)
Query: 72 VVYKGKLENQFRIAVKRFNRSAWPDA--RQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129
++KG+ + I VK W R F EE + + + +LG C
Sbjct: 25 ELWKGRWQGN-DIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPH 83
Query: 130 L--VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYR 186
+ +MP +L L + + ++ AL +A + + + E + LN+
Sbjct: 84 PTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRS 143
Query: 187 IVFDDDVNPRLSCFGLMKNSRDGRSY-STNLAFTP----PEYLRTGRVTPESV---MYSF 238
++ D+D+ R+S + S+ S + P PE L+ M+SF
Sbjct: 144 VMIDEDMTARISMADV------KFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSF 197
Query: 239 GTLLLDLLSGK----HIPPSHALDLIRDRNIQ-TLTDSCLEGQFSSDEGTELVRLASRCL 293
LL +L++ + + + ++ T+ + +L C+
Sbjct: 198 AVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGISP---------HVSKLMKICM 248
Query: 294 QYEPRERPNPRSLVTALVTLQK 315
+P +RP +V L +Q
Sbjct: 249 NEDPAKRPKFDMIVPILEKMQD 270
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 104 bits (260), Expect = 6e-25
Identities = 49/322 (15%), Positives = 105/322 (32%), Gaps = 57/322 (17%)
Query: 43 EYSIETLRTATSGFAMENIVSE--HGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQF 100
+ E L + + + + G V+K +L N+ +AVK F D + +
Sbjct: 13 DLGTENLYFQSMPLQLLEVKARGRFGC-----VWKAQLLNE-YVAVKIFPIQ---DKQSW 63
Query: 101 LEEA--RAVGQLRNRRLANLLGCCCEGD----ERLLVAEYMPNDTLAKHLFHWETQPMKW 154
E ++ +++ + +G G + L+ + +L+ L + W
Sbjct: 64 QNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKA---NVVSW 120
Query: 155 AMRLRVALHIAEALEY--------CTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMKN 205
+A +A L Y + A+ H D+ + ++ +++ ++ FGL
Sbjct: 121 NELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALK 180
Query: 206 SRDGRSYSTNLAFT------PPEYLRTGRVTPESV-----MYSFGTLLLDLLSGK----- 249
G+S PE L MY+ G +L +L S
Sbjct: 181 FEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADG 240
Query: 250 -----------HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT-ELVRLASRCLQYEP 297
I +L+ +++ + L + G L C ++
Sbjct: 241 PVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDA 300
Query: 298 RERPNPRSLVTALVTLQKDTEV 319
R + + + +Q+ T +
Sbjct: 301 EARLSAGCVGERITQMQRLTNI 322
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 98.9 bits (247), Expect = 3e-23
Identities = 51/264 (19%), Positives = 108/264 (40%), Gaps = 23/264 (8%)
Query: 72 VVYKGKLENQFRIAVKRFNRSAWPDA--RQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129
V++ + +AVK + +FL E + +LR+ + +G +
Sbjct: 52 TVHRAEWHGS-DVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLS 110
Query: 130 LVAEYMPNDTLAKHLFHWET-QPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRI 187
+V EY+ +L + L + + RL +A +A+ + Y ++ + H +L + +
Sbjct: 111 IVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNL 170
Query: 188 VFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGTLLL 243
+ D ++ FGL + S + A TP PE LR +S +YSFG +L
Sbjct: 171 LVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILW 230
Query: 244 DLLSGK----HIPPSHALDLIRDRNIQ-TLTDSCLEGQFSSDEGTELVRLASRCLQYEPR 298
+L + + ++ P+ + + + + + + ++ + C EP
Sbjct: 231 ELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNP---------QVAAIIEGCWTNEPW 281
Query: 299 ERPNPRSLVTALVTLQKDTEVPSH 322
+RP+ +++ L L K P +
Sbjct: 282 KRPSFATIMDLLRPLIKSAVPPPN 305
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 92.0 bits (229), Expect = 5e-21
Identities = 55/266 (20%), Positives = 109/266 (40%), Gaps = 38/266 (14%)
Query: 73 VYKGKLENQFRIAVKRFNRSAWPDA--RQFLEEARAVGQLRNRRLANLLGCCCEGDERL- 129
VYKGK +AVK N +A + F E + + R+ + +G +L
Sbjct: 40 VYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA--PQLA 95
Query: 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIV 188
+V ++ +L HL H + + +A A ++Y +K + H DL + I
Sbjct: 96 IVTQWCEGSSLYHHL-HASETKFEMKKLIDIARQTARGMDYLHAKS--IIHRDLKSNNIF 152
Query: 189 FDDDVNPRLSCFGL--MKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESV---MYSFG 239
+D ++ FGL K+ G L+ + PE +R P S +Y+FG
Sbjct: 153 LHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFG 212
Query: 240 TLLLDLLSGK-----HIPPSHALDLI----RDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290
+L +L++G+ ++++ ++ + +C + + RL +
Sbjct: 213 IVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPK---------RMKRLMA 263
Query: 291 RCLQYEPRERPNPRSLVTALVTLQKD 316
CL+ + ERP+ ++ + L ++
Sbjct: 264 ECLKKKRDERPSFPRILAEIEELARE 289
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 91.6 bits (228), Expect = 9e-21
Identities = 48/259 (18%), Positives = 102/259 (39%), Gaps = 31/259 (11%)
Query: 72 VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
VV K K + +A+K+ + + F+ E R + ++ + + L G C + LV
Sbjct: 23 VVCKAKWRAK-DVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLV 77
Query: 132 AEYMPNDTLAKHLFHWETQP-MKWAMRLRVALHIAEALEYC-TSKERALYH-DLNAYRIV 188
EY +L L E P A + L ++ + Y + + +AL H DL ++
Sbjct: 78 MEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLL 137
Query: 189 FDDD-VNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGTLLL 243
++ FG + D +++ TN + PE + + ++S+G +L
Sbjct: 138 LVAGGTVLKICDFGT---ACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILW 194
Query: 244 DLLSGK------HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEP 297
++++ + P + + + L + + + L +RC +P
Sbjct: 195 EVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPK---------PIESLMTRCWSKDP 245
Query: 298 RERPNPRSLVTALVTLQKD 316
+RP+ +V + L +
Sbjct: 246 SQRPSMEEIVKIMTHLMRY 264
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 89.3 bits (222), Expect = 3e-20
Identities = 53/266 (19%), Positives = 95/266 (35%), Gaps = 40/266 (15%)
Query: 72 VVYKGKLENQFRIAVKRFNRSAWPDA----RQFLEEARAVGQLRNRRLANLLGCCCEGDE 127
VY+ +AVK D +EA+ L++ + L G C +
Sbjct: 22 KVYRAFWIGD-EVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPN 80
Query: 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYC-TSKERALYH-DLNAY 185
LV E+ L + L + + + + A+ IA + Y + H DL +
Sbjct: 81 LCLVMEFARGGPLNRVL---SGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSS 137
Query: 186 RIVFDDDVNPRLSC--------FGLMKNSRD-GRSYSTNLAFTP----PEYLRTGRVTPE 232
I+ V FGL +R+ R+ + A PE +R +
Sbjct: 138 NILILQKVENGDLSNKILKITDFGL---AREWHRTTKMSAAGAYAWMAPEVIRASMFSKG 194
Query: 233 SVMYSFGTLLLDLLSGK----HIPPSHALDLIRDRNIQ-TLTDSCLEGQFSSDEGTELVR 287
S ++S+G LL +LL+G+ I + + + +C E +
Sbjct: 195 SDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPE---------PFAK 245
Query: 288 LASRCLQYEPRERPNPRSLVTALVTL 313
L C +P RP+ +++ L T+
Sbjct: 246 LMEDCWNPDPHSRPSFTNILDQLTTI 271
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 88.9 bits (221), Expect = 5e-20
Identities = 55/266 (20%), Positives = 106/266 (39%), Gaps = 42/266 (15%)
Query: 72 VVYKGK-LENQFRIAVKRFNRSAWPDA-------RQFLEEARAVGQLRNRRLANLLGCCC 123
+V+KG+ ++++ +A+K ++F E + L + + L G
Sbjct: 34 LVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMH 93
Query: 124 EGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DL 182
+V E++P L L + P+KW+++LR+ L IA +EY ++ + H DL
Sbjct: 94 NPP--RMVMEFVPCGDLYHRL-LDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDL 150
Query: 183 NAYRIVFDDDVNPRLSC-----FGLMKNSRDGRSYSTNLAFTP----PEYL--RTGRVTP 231
+ I C FGL S+ + L PE + T
Sbjct: 151 RSPNIFLQSLDENAPVCAKVADFGL---SQQSVHSVSGLLGNFQWMAPETIGAEEESYTE 207
Query: 232 ESVMYSFGTLLLDLLSGK----HIPPSHA--LDLIRDRNIQ-TLTDSCLEGQFSSDEGTE 284
++ YSF +L +L+G+ +++IR+ ++ T+ + C
Sbjct: 208 KADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPP---------R 258
Query: 285 LVRLASRCLQYEPRERPNPRSLVTAL 310
L + C +P++RP+ +V L
Sbjct: 259 LRNVIELCWSGDPKKRPHFSYIVKEL 284
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 87.0 bits (216), Expect = 4e-19
Identities = 47/276 (17%), Positives = 89/276 (32%), Gaps = 39/276 (14%)
Query: 72 VVYKGKLENQFRIAVKRFNRSAWPDA--RQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129
VY G+ + +A++ + + + F E A Q R+ + +G C
Sbjct: 48 QVYHGRWHGE--VAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLA 105
Query: 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIV 188
++ TL + + ++A I + + Y +K + H DL + +
Sbjct: 106 IITSLCKGRTLYSVV-RDAKIVLDVNKTRQIAQEIVKGMGYLHAK--GILHKDLKSKNVF 162
Query: 189 FDDDVNPRLSCFGL--MKNSRDGRSYSTNLAFTP-------PEYLRTGRVTPESVM---- 235
+D+ ++ FGL + L PE +R E
Sbjct: 163 YDNG-KVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFS 221
Query: 236 -----YSFGTLLLDLLSGK----HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 286
++ GT+ +L + + P + + L+ G E+
Sbjct: 222 KHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNLSQ--------IGMGKEIS 273
Query: 287 RLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPSH 322
+ C +E ERP L+ L L K SH
Sbjct: 274 DILLFCWAFEQEERPTFTKLMDMLEKLPKRNRRLSH 309
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 85.3 bits (211), Expect = 2e-18
Identities = 58/343 (16%), Positives = 107/343 (31%), Gaps = 68/343 (19%)
Query: 43 EYSIETLRTATSGFAMENIVSE--HGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQF 100
E + + ++ +G VYKG L+ + +AVK F+ + + + F
Sbjct: 2 EAAASEPSLDLDNLKLLELIGRGRYGA-----VYKGSLDERP-VAVKVFS---FANRQNF 52
Query: 101 LEEAR--AVGQLRNRRLANLLGCCCEGD-----ERLLVAEYMPNDTLAKHLFHWETQPMK 153
+ E V + + +A + E LLV EY PN +L K+L
Sbjct: 53 INEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSL---HTSD 109
Query: 154 WAMRLRVALHIAEALEY-------CTSKERALYH-DLNAYRIVFDDDVNPRLSCFGL--- 202
W R+A + L Y + A+ H DLN+ ++ +D +S FGL
Sbjct: 110 WVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMR 169
Query: 203 -----MKNSRDGRSYSTNLAFTP----PEYLR-------TGRVTPESVMYSFGTLLLDLL 246
+ + + + + T PE L + MY+ G + ++
Sbjct: 170 LTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
Query: 247 SGK------HIPPSHAL----DLIRDRNIQTLTDS-CLEGQ-------FSSDEGT--ELV 286
P + + ++ + + E Q + + L
Sbjct: 230 MRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLK 289
Query: 287 RLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPSHVLMGIPH 329
C + R + + L E V H
Sbjct: 290 ETIEDCWDQDAEARLTAQXAEERMAELMMIWERNKSVSPTAHH 332
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 83.2 bits (206), Expect = 8e-18
Identities = 48/272 (17%), Positives = 91/272 (33%), Gaps = 38/272 (13%)
Query: 73 VYKGKLENQFR-IAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
K + +K R R FL+E + + L + + +G + +
Sbjct: 26 AIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFI 85
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 190
EY+ TL + W+ R+ A IA + Y S + H DLN++ +
Sbjct: 86 TEYIKGGTLRGII-KSMDSQYPWSQRVSFAKDIASGMAYLHSMN--IIHRDLNSHNCLVR 142
Query: 191 DDVNPRLSCFGL--------------MKNSRDGRSYSTNLAFTP----PEYLRTGRVTPE 232
++ N ++ FGL + R + P PE + +
Sbjct: 143 ENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEK 202
Query: 233 SVMYSFGTLLLDLLSGKHIPP-----SHALDLIRDRNI-QTLTDSCLEGQFSSDEGTELV 286
++SFG +L +++ + P + L + + +C
Sbjct: 203 VDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPNCPP---------SFF 253
Query: 287 RLASRCLQYEPRERPNPRSLVTALVTLQKDTE 318
+ RC +P +RP+ L L TL+
Sbjct: 254 PITVRCCDLDPEKRPSFVKLEHWLETLRMHLA 285
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 81.9 bits (203), Expect = 2e-17
Identities = 57/260 (21%), Positives = 109/260 (41%), Gaps = 24/260 (9%)
Query: 72 VVYKGKLENQ-FRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130
VY+G + +AVK + +FL+EA + ++++ L LLG C +
Sbjct: 28 EVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86
Query: 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVF 189
+ E+M L +L Q + + L +A I+ A+EY K H DL A +
Sbjct: 87 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIHRDLAARNCLV 144
Query: 190 DDDVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGTLLLD 244
++ +++ FGL + + A +T PE L + + +S +++FG LL +
Sbjct: 145 GENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 204
Query: 245 LLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRE 299
+ + P S +L+ + C E ++ L C Q+ P +
Sbjct: 205 IATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPE---------KVYELMRACWQWNPSD 255
Query: 300 RPNPRSLVTALVTLQKDTEV 319
RP+ + A T+ +++ +
Sbjct: 256 RPSFAEIHQAFETMFQESSI 275
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377 | Back alignment and structure |
|---|
Score = 82.7 bits (205), Expect = 2e-17
Identities = 62/258 (24%), Positives = 105/258 (40%), Gaps = 26/258 (10%)
Query: 73 VYKGKLENQ-FRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDERLL 130
V+ G+L +AVK + PD + FL+EAR + Q + + L+G C + +
Sbjct: 130 VFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYI 189
Query: 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVF 189
V E + L E ++ L++ A +EY SK H DL A +
Sbjct: 190 VMELVQGGDFLTFL-RTEGARLRVKTLLQMVGDAAAGMEYLESKC--CIHRDLAARNCLV 246
Query: 190 DDDVNPRLSCFGLMKNSRDGRSYSTNLAF------TPPEYLRTGRVTPESVMYSFGTLLL 243
+ ++S FG+ + DG ++ T PE L GR + ES ++SFG LL
Sbjct: 247 TEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLW 306
Query: 244 DLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPR 298
+ S P + + + C + + RL +C YEP
Sbjct: 307 ETFSLGASPYPNLSNQQTREFVEKGGRLPCPELCPD---------AVFRLMEQCWAYEPG 357
Query: 299 ERPNPRSLVTALVTLQKD 316
+RP+ ++ L +++K
Sbjct: 358 QRPSFSTIYQELQSIRKR 375
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495 | Back alignment and structure |
|---|
Score = 83.7 bits (207), Expect = 2e-17
Identities = 56/259 (21%), Positives = 109/259 (42%), Gaps = 24/259 (9%)
Query: 73 VYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
VY+G + +AVK + +FL+EA + ++++ L LLG C ++
Sbjct: 236 VYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 294
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 190
E+M L +L Q + + L +A I+ A+EY K H +L A +
Sbjct: 295 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIHRNLAARNCLVG 352
Query: 191 DDVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGTLLLDL 245
++ +++ FGL + + A +T PE L + + +S +++FG LL ++
Sbjct: 353 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 412
Query: 246 LSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
+ P S +L+ + C E ++ L C Q+ P +R
Sbjct: 413 ATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPE---------KVYELMRACWQWNPSDR 463
Query: 301 PNPRSLVTALVTLQKDTEV 319
P+ + A T+ +++ +
Sbjct: 464 PSFAEIHQAFETMFQESSI 482
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452 | Back alignment and structure |
|---|
Score = 83.3 bits (206), Expect = 3e-17
Identities = 64/257 (24%), Positives = 101/257 (39%), Gaps = 24/257 (9%)
Query: 73 VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132
V+ G R+A+K FL+EA+ + +LR+ +L L E + +V
Sbjct: 200 VWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 257
Query: 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFDD 191
EYM +L L + ++ + +A IA + Y H DL A I+ +
Sbjct: 258 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILVGE 315
Query: 192 DVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGTLLLDLL 246
++ +++ FGL + D + A +T PE GR T +S ++SFG LL +L
Sbjct: 316 NLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 375
Query: 247 SGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 301
+ +P LD + C E L L +C + EP ERP
Sbjct: 376 TKGRVPYPGMVNREVLDQVERGYRMPCPPECPE---------SLHDLMCQCWRKEPEERP 426
Query: 302 NPRSLVTALVTLQKDTE 318
L L TE
Sbjct: 427 TFEYLQAFLEDYFTSTE 443
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450 | Back alignment and structure |
|---|
Score = 82.8 bits (205), Expect = 3e-17
Identities = 64/255 (25%), Positives = 100/255 (39%), Gaps = 28/255 (10%)
Query: 73 VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL-LV 131
V G ++AVK A A+ FL EA + QLR+ L LLG E L +V
Sbjct: 209 VMLGDYRGN-KVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 265
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 190
EYM +L +L + L+ +L + EA+EY H DL A ++
Sbjct: 266 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN--FVHRDLAARNVLVS 323
Query: 191 DDVNPRLSCFGLMKNSRDGRSYSTNLAF----TPPEYLRTGRVTPESVMYSFGTLLLDLL 246
+D ++S FGL +++ S T PE LR + + +S ++SFG LL ++
Sbjct: 324 EDNVAKVSDFGL---TKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIY 380
Query: 247 S-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 301
S G+ IP + + D C + + C + RP
Sbjct: 381 SFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPP---------AVYDVMKNCWHLDAATRP 431
Query: 302 NPRSLVTALVTLQKD 316
L L ++
Sbjct: 432 TFLQLREQLEHIRTH 446
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278 | Back alignment and structure |
|---|
Score = 80.7 bits (200), Expect = 3e-17
Identities = 64/250 (25%), Positives = 99/250 (39%), Gaps = 28/250 (11%)
Query: 72 VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL-L 130
V G ++AVK A A+ FL EA + QLR+ L LLG E L +
Sbjct: 36 DVMLGDYRGN-KVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 92
Query: 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVF 189
V EYM +L +L + L+ +L + EA+EY H DL A ++
Sbjct: 93 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN--FVHRDLAARNVLV 150
Query: 190 DDDVNPRLSCFGLMKNSRDGRSYSTNLAF----TPPEYLRTGRVTPESVMYSFGTLLLDL 245
+D ++S FGL +++ S T PE LR + + +S ++SFG LL ++
Sbjct: 151 SEDNVAKVSDFGL---TKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEI 207
Query: 246 LS-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
S G+ IP + + D C + + C + R
Sbjct: 208 YSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPP---------AVYEVMKNCWHLDAAMR 258
Query: 301 PNPRSLVTAL 310
P+ L L
Sbjct: 259 PSFLQLREQL 268
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535 | Back alignment and structure |
|---|
Score = 82.6 bits (204), Expect = 5e-17
Identities = 64/257 (24%), Positives = 101/257 (39%), Gaps = 24/257 (9%)
Query: 73 VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132
V+ G R+A+K FL+EA+ + +LR+ +L L E + +V
Sbjct: 283 VWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 340
Query: 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFDD 191
EYM +L L + ++ + +A IA + Y H DL A I+ +
Sbjct: 341 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN--YVHRDLRAANILVGE 398
Query: 192 DVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGTLLLDLL 246
++ +++ FGL + D + A +T PE GR T +S ++SFG LL +L
Sbjct: 399 NLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 458
Query: 247 SGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 301
+ +P LD + C E L L +C + EP ERP
Sbjct: 459 TKGRVPYPGMVNREVLDQVERGYRMPCPPECPE---------SLHDLMCQCWRKEPEERP 509
Query: 302 NPRSLVTALVTLQKDTE 318
L L TE
Sbjct: 510 TFEYLQAFLEDYFTSTE 526
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454 | Back alignment and structure |
|---|
Score = 82.1 bits (203), Expect = 6e-17
Identities = 57/264 (21%), Positives = 102/264 (38%), Gaps = 38/264 (14%)
Query: 73 VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132
V+ ++AVK + FL EA + L++ +L L + + ++
Sbjct: 204 VWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIIT 261
Query: 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFDD 191
E+M +L L E + + IAE + + + H DL A I+
Sbjct: 262 EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN--YIHRDLRAANILVSA 319
Query: 192 DVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGTLLLDLL 246
+ +++ FGL + D + A +T PE + G T +S ++SFG LL++++
Sbjct: 320 SLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIV 379
Query: 247 SGKHIP-PSHALDLIRDRNIQTLT-----------DSCLEGQFSSDEGTELVRLASRCLQ 294
+ IP P + N + + ++C E EL + RC +
Sbjct: 380 TYGRIPYPGMS-------NPEVIRALERGYRMPRPENCPE---------ELYNIMMRCWK 423
Query: 295 YEPRERPNPRSLVTALVTLQKDTE 318
P ERP + + L TE
Sbjct: 424 NRPEERPTFEYIQSVLDDFYTATE 447
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268 | Back alignment and structure |
|---|
Score = 79.2 bits (196), Expect = 1e-16
Identities = 50/256 (19%), Positives = 109/256 (42%), Gaps = 24/256 (9%)
Query: 72 VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
VV GK + Q+ +AVK + +F +EA+ + +L + +L G C + +V
Sbjct: 23 VVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIV 81
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 190
EY+ N L +L + ++ + L + + E + + S + H DL A + D
Sbjct: 82 TEYISNGCLLNYL-RSHGKGLEPSQLLEMCYDVCEGMAFLESHQ--FIHRDLAARNCLVD 138
Query: 191 DDVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGTLLLDL 245
D+ ++S FG+ + D + S+ ++ PE + + +S +++FG L+ ++
Sbjct: 139 RDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEV 198
Query: 246 LSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
S +P S + + + + + ++ C P +R
Sbjct: 199 FSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASD---------TIYQIMYSCWHELPEKR 249
Query: 301 PNPRSLVTALVTLQKD 316
P + L++++ L++
Sbjct: 250 PTFQQLLSSIEPLREK 265
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289 | Back alignment and structure |
|---|
Score = 78.9 bits (195), Expect = 2e-16
Identities = 60/280 (21%), Positives = 107/280 (38%), Gaps = 37/280 (13%)
Query: 73 VYKGKL--------ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE 124
++KG ++ + +K +++ + F E A + +L ++ L G C
Sbjct: 24 IFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVC 83
Query: 125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLN 183
GDE +LV E++ +L +L + +L VA +A A+ + L H ++
Sbjct: 84 GDENILVQEFVKFGSLDTYL-KKNKNCINILWKLEVAKQLAAAMHFLEENT--LIHGNVC 140
Query: 184 AYRI-VFDDDVNPR-------LSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRV-TPESV 234
A I + ++ LS G+ + + PPE + + +
Sbjct: 141 AKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECIENPKNLNLATD 200
Query: 235 MYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289
+SFGT L ++ SG P L DR Q + + EL L
Sbjct: 201 KWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDR-----------HQLPAPKAAELANLI 249
Query: 290 SRCLQYEPRERPNPRSLVTALVTLQKDTEVPSHVLMGIPH 329
+ C+ YEP RP+ R+++ L +L VP H
Sbjct: 250 NNCMDYEPDHRPSFRAIIRDLNSLFTPDLVPRGSHHHHHH 289
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 76.9 bits (190), Expect = 7e-16
Identities = 65/264 (24%), Positives = 108/264 (40%), Gaps = 38/264 (14%)
Query: 73 VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132
V+ G ++AVK + + FL EA + QL+++RL L + + ++
Sbjct: 29 VWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIIT 86
Query: 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFDD 191
EYM N +L L + L +A IAE + + + H DL A I+ D
Sbjct: 87 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN--YIHRDLRAANILVSD 144
Query: 192 DVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGTLLLDLL 246
++ +++ FGL + D + A +T PE + G T +S ++SFG LL +++
Sbjct: 145 TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 204
Query: 247 SGKHIP-PSHALDLIRDRNIQTLT-----------DSCLEGQFSSDEGTELVRLASRCLQ 294
+ IP P N + + D+C E EL +L C +
Sbjct: 205 THGRIPYPGMT-------NPEVIQNLERGYRMVRPDNCPE---------ELYQLMRLCWK 248
Query: 295 YEPRERPNPRSLVTALVTLQKDTE 318
P +RP L + L TE
Sbjct: 249 ERPEDRPTFDYLRSVLEDFFTATE 272
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267 | Back alignment and structure |
|---|
Score = 75.7 bits (187), Expect = 1e-15
Identities = 54/259 (20%), Positives = 98/259 (37%), Gaps = 32/259 (12%)
Query: 72 VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
+V+ G N+ ++A+K A F+EEA + +L + +L L G C E LV
Sbjct: 23 LVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV 81
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 190
E+M + L+ +L + L + L + E + Y + H DL A +
Sbjct: 82 TEFMEHGCLSDYLRTQRGLFAAETL-LGMCLDVCEGMAYLEEAC--VIHRDLAARNCL-- 136
Query: 191 DDVNPRLSC----FGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGTL 241
V FG+ + D + S+ + PE R + +S ++SFG L
Sbjct: 137 --VGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVL 194
Query: 242 LLDLLSGKHIP-P----SHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYE 296
+ ++ S IP S ++ I + ++ + C +
Sbjct: 195 MWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLAST---------HVYQIMNHCWRER 245
Query: 297 PRERPNPRSLVTALVTLQK 315
P +RP L+ L + +
Sbjct: 246 PEDRPAFSRLLRQLAEIAE 264
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283 | Back alignment and structure |
|---|
Score = 75.0 bits (185), Expect = 3e-15
Identities = 58/253 (22%), Positives = 108/253 (42%), Gaps = 24/253 (9%)
Query: 72 VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
VV GK Q+ +A+K + +F+EEA+ + L + +L L G C + ++
Sbjct: 39 VVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII 97
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFD 190
EYM N L +L + + L + + EA+EY SK+ H DL A + +
Sbjct: 98 TEYMANGCLLNYLREMRHRFQTQQL-LEMCKDVCEAMEYLESKQ--FLHRDLAARNCLVN 154
Query: 191 DDVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGTLLLDL 245
D ++S FGL + D S+ + ++PPE L + + +S +++FG L+ ++
Sbjct: 155 DQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 214
Query: 246 LSGKHIP-P----SHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
S +P S + I E ++ + C + ER
Sbjct: 215 YSLGKMPYERFTNSETAEHIAQGLRLYRPHLASE---------KVYTIMYSCWHEKADER 265
Query: 301 PNPRSLVTALVTL 313
P + L++ ++ +
Sbjct: 266 PTFKILLSNILDV 278
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656 | Back alignment and structure |
|---|
Score = 75.7 bits (186), Expect = 1e-14
Identities = 52/263 (19%), Positives = 97/263 (36%), Gaps = 29/263 (11%)
Query: 73 VYKGKL----ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDE 127
V++G +A+K R+ FL+EA + Q + + L+G +
Sbjct: 406 VHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG-VITENP 464
Query: 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYR 186
++ E L L + + A + A ++ AL Y SK H D+ A
Sbjct: 465 VWIIMELCTLGELRSFLQVRKFS-LDLASLILYAYQLSTALAYLESKR--FVHRDIAARN 521
Query: 187 IVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGTL 241
++ + +L FGL + D Y + + PE + R T S ++ FG
Sbjct: 522 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVC 581
Query: 242 LLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYE 296
+ ++L P + + I + + +C L L ++C Y+
Sbjct: 582 MWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPP---------TLYSLMTKCWAYD 632
Query: 297 PRERPNPRSLVTALVTLQKDTEV 319
P RP L L T+ ++ ++
Sbjct: 633 PSRRPRFTELKAQLSTILEEEKL 655
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373 | Back alignment and structure |
|---|
Score = 73.6 bits (181), Expect = 2e-14
Identities = 69/319 (21%), Positives = 117/319 (36%), Gaps = 52/319 (16%)
Query: 73 VYKGKL----ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDE 127
V G+L + + +A+K R+ FL EA +GQ + + L G +
Sbjct: 61 VCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKP 120
Query: 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALY-H-DLNAY 185
++V EYM N +L L + Q + + IA ++Y + Y H DL A
Sbjct: 121 VMIVTEYMENGSLDSFLRKHDAQF-TVIQLVGMLRGIASGMKYLSDMG---YVHRDLAAR 176
Query: 186 RIVFDDDVNPRLSC----FGLMKNSRDGRSY---STNLAF----TPPEYLRTGRVTPESV 234
I+ +N L C FGL + D + T PE + + T S
Sbjct: 177 NIL----INSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASD 232
Query: 235 MYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289
++S+G +L +++S P + + + C L +L
Sbjct: 233 VWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPA---------ALYQLM 283
Query: 290 SRCLQYEPRERPNPRSLVTALVTLQKDTEVPSHVLMGIPHGAAALPLSPLGDACLRMDLT 349
C Q + RP +V+ L L ++ + I AAA P + L D +D+T
Sbjct: 284 LDCWQKDRNNRPKFEQIVSILDKLIRNPGS-----LKIITSAAARPSNLLLDQS-NVDIT 337
Query: 350 A---IHEILEKLG---YKD 362
+ L + K+
Sbjct: 338 TFRTTGDWLNGVWTAHCKE 356
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 72.3 bits (178), Expect = 3e-14
Identities = 59/266 (22%), Positives = 105/266 (39%), Gaps = 32/266 (12%)
Query: 73 VYKGKL----ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDE 127
VY G+ +N+ + A+K +R + FL E + L + + L+G +
Sbjct: 37 VYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEG 96
Query: 128 RLL-VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAY 185
+ YM + L + + + P + + L +A +EY ++ H DL A
Sbjct: 97 LPHVLLPYMCHGDLLQFIRSPQRNPTVKDL-ISFGLQVARGMEYLAEQK--FVHRDLAAR 153
Query: 186 RIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAF--------TPPEYLRTGRVTPESVMYS 237
+ D+ +++ FGL ++ D YS T E L+T R T +S ++S
Sbjct: 154 NCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWS 213
Query: 238 FGTLLLDLLS-GK----HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRC 292
FG LL +LL+ G HI P + + C + L ++ +C
Sbjct: 214 FGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEYCPD---------SLYQVMQQC 264
Query: 293 LQYEPRERPNPRSLVTALVTLQKDTE 318
+ +P RP R LV + +
Sbjct: 265 WEADPAVRPTFRVLVGEVEQIVSALL 290
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298 | Back alignment and structure |
|---|
Score = 72.3 bits (178), Expect = 3e-14
Identities = 57/261 (21%), Positives = 100/261 (38%), Gaps = 38/261 (14%)
Query: 73 VYKGKL----ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDE 127
VY G L + AVK NR FL E + + + +LLG C +
Sbjct: 41 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 100
Query: 128 -RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAY 185
L+V YM + L + + P + + L +A+ ++Y SK+ H DL A
Sbjct: 101 SPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYLASKK--FVHRDLAAR 157
Query: 186 RIVFDDDVNPRLSCFGLMKNSRD------GRSYSTNLAF-----TPPEYLRTGRVTPESV 234
+ D+ +++ FGL +RD ++ A E L+T + T +S
Sbjct: 158 NCMLDEKFTVKVADFGL---ARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSD 214
Query: 235 MYSFGTLLLDLLS-GK----HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289
++SFG LL +L++ G + + + C + L +
Sbjct: 215 VWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---------PLYEVM 265
Query: 290 SRCLQYEPRERPNPRSLVTAL 310
+C + RP+ LV+ +
Sbjct: 266 LKCWHPKAEMRPSFSELVSRI 286
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333 | Back alignment and structure |
|---|
Score = 72.7 bits (179), Expect = 3e-14
Identities = 62/286 (21%), Positives = 108/286 (37%), Gaps = 39/286 (13%)
Query: 73 VYKGKL-----ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGD 126
VYKG L + + +A+K R FL EA +GQ + + L G +
Sbjct: 60 VYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYK 119
Query: 127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAY 185
+++ EYM N L K L + + + + + IA ++Y + H DL A
Sbjct: 120 PMMIITEYMENGALDKFLREKDGEFSVLQL-VGMLRGIAAGMKYLANM--NYVHRDLAAR 176
Query: 186 RIVFDDDVNPRLSC----FGL---MKNSRDGRSYSTNLAF----TPPEYLRTGRVTPESV 234
I+ VN L C FGL +++ + ++ T PE + + T S
Sbjct: 177 NIL----VNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASD 232
Query: 235 MYSFGTLLLDLLSGKHIP-P----SHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289
++SFG ++ ++++ P + I D C + +L
Sbjct: 233 VWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPS---------AIYQLM 283
Query: 290 SRCLQYEPRERPNPRSLVTALVTLQKDTEVPSHVLMGIPHGAAALP 335
+C Q E RP +V+ L L + + + P + LP
Sbjct: 284 MQCWQQERARRPKFADIVSILDKLIRAPDSLKTLADFDPRVSIRLP 329
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281 | Back alignment and structure |
|---|
Score = 71.5 bits (176), Expect = 4e-14
Identities = 51/263 (19%), Positives = 96/263 (36%), Gaps = 29/263 (11%)
Query: 72 VVYKGKL----ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGD 126
V++G +A+K R+ FL+EA + Q + + L+G +
Sbjct: 30 DVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG-VITEN 88
Query: 127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAY 185
++ E L L + ++ + A ++ AL Y SK H D+ A
Sbjct: 89 PVWIIMELCTLGELRSFLQVRKYSLDLASL-ILYAYQLSTALAYLESKR--FVHRDIAAR 145
Query: 186 RIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGT 240
++ + +L FGL + D Y + + PE + R T S ++ FG
Sbjct: 146 NVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGV 205
Query: 241 LLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQY 295
+ ++L P + + I + + +C L L ++C Y
Sbjct: 206 CMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPP---------TLYSLMTKCWAY 256
Query: 296 EPRERPNPRSLVTALVTLQKDTE 318
+P RP L L T+ ++ +
Sbjct: 257 DPSRRPRFTELKAQLSTILEEEK 279
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323 | Back alignment and structure |
|---|
Score = 72.0 bits (177), Expect = 4e-14
Identities = 53/280 (18%), Positives = 101/280 (36%), Gaps = 45/280 (16%)
Query: 73 VYKGKL----ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGD 126
V + +L + ++AVK D +FL EA + + + +A L+G
Sbjct: 39 VREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSR 98
Query: 127 ER------LLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKER 176
+ +++ +M + L + +R + IA +EY +S+
Sbjct: 99 AKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN- 157
Query: 177 ALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRD--GRSY---STNLAF----TPPEYLRT 226
H DL A + +D+ ++ FGL SR Y E L
Sbjct: 158 -FIHRDLAARNCMLAEDMTVCVADFGL---SRKIYSGDYYRQGCASKLPVKWLALESLAD 213
Query: 227 GRVTPESVMYSFGTLLLDLLS-GK----HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 281
T S +++FG + ++++ G+ I + + + N C+E
Sbjct: 214 NLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQPPECME------- 266
Query: 282 GTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPS 321
E+ L +C +P++RP+ L L + V S
Sbjct: 267 --EVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLS 304
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322 | Back alignment and structure |
|---|
Score = 71.6 bits (176), Expect = 6e-14
Identities = 56/271 (20%), Positives = 107/271 (39%), Gaps = 38/271 (14%)
Query: 73 VYKGKLENQF------RIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEG 125
VY+G + R+A+K N +A R FL EA + + + LLG +G
Sbjct: 41 VYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG 100
Query: 126 DERLLVAEYMPNDTLAKHL--------FHWETQPMKWAMRLRVALHIAEALEYCTSKERA 177
L++ E M L +L + P + +++A IA+ + Y + +
Sbjct: 101 QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK-- 158
Query: 178 LYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY--STNLAF----TPPEYLRTGRVT 230
H DL A + +D ++ FG+ ++ + Y PE L+ G T
Sbjct: 159 FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFT 218
Query: 231 PESVMYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 285
S ++SFG +L ++ + + + L + + + D+C + L
Sbjct: 219 TYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPD---------ML 269
Query: 286 VRLASRCLQYEPRERPNPRSLVTALVTLQKD 316
L C QY P+ RP+ +++++ +
Sbjct: 270 FELMRMCWQYNPKMRPSFLEIISSIKEEMEP 300
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325 | Back alignment and structure |
|---|
Score = 71.2 bits (175), Expect = 9e-14
Identities = 55/269 (20%), Positives = 96/269 (35%), Gaps = 38/269 (14%)
Query: 72 VVYKGKL----ENQFRIAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGD 126
V G+L + +A+K R FL EA +GQ + + L G G
Sbjct: 64 EVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGR 123
Query: 127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAY 185
++V EYM N +L L + Q + + + + Y + H DL A
Sbjct: 124 LAMIVTEYMENGSLDTFLRTHDGQF-TIMQLVGMLRGVGAGMRYLSDL--GYVHRDLAAR 180
Query: 186 RIVFDDDVNPRLSC----FGL---MKNSRDGRSYSTNLAF----TPPEYLRTGRVTPESV 234
++ V+ L C FGL +++ D +T T PE + + S
Sbjct: 181 NVL----VDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASD 236
Query: 235 MYSFGTLLLDLLSGKHIP-P----SHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289
++SFG ++ ++L+ P + + + C L +L
Sbjct: 237 VWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCPH---------ALHQLM 287
Query: 290 SRCLQYEPRERPNPRSLVTALVTLQKDTE 318
C + +RP +V+ L L + E
Sbjct: 288 LDCWHKDRAQRPRFSQIVSVLDALIRSPE 316
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367 | Back alignment and structure |
|---|
Score = 71.3 bits (175), Expect = 1e-13
Identities = 59/278 (21%), Positives = 98/278 (35%), Gaps = 46/278 (16%)
Query: 73 VYKGKLEN------QFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEG 125
VY+G++ ++AVK FL EA + + ++ + +G +
Sbjct: 87 VYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 146
Query: 126 DERLLVAEYMPNDTLAKHL---FHWETQPMKWAMR--LRVALHIAEALEYCTSKERALYH 180
R ++ E M L L +QP AM L VA IA +Y H
Sbjct: 147 LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--FIH 204
Query: 181 -DLNAYRIVFDDDVNPRLSC----FGLMKNSRD--GRSY---STNLAF----TPPEYLRT 226
D+ A R P FG+ +RD Y PPE
Sbjct: 205 RDIAA-RNCLLTCPGPGRVAKIGDFGM---ARDIYRAGYYRKGGCAMLPVKWMPPEAFME 260
Query: 227 GRVTPESVMYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 281
G T ++ +SFG LL ++ S G L+ + +C
Sbjct: 261 GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPG------- 313
Query: 282 GTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 319
+ R+ ++C Q++P +RPN ++ + +D +V
Sbjct: 314 --PVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 349
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 70.9 bits (174), Expect = 1e-13
Identities = 54/279 (19%), Positives = 97/279 (34%), Gaps = 41/279 (14%)
Query: 72 VVYKGKLE-----NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD 126
V + + +AVK+ S R F E + L++ + G C
Sbjct: 56 SVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG 115
Query: 127 ER--LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLN 183
R L+ EY+P +L +L + + + L+ I + +EY +K H DL
Sbjct: 116 RRNLKLIMEYLPYGSLRDYLQKHKER-IDHIKLLQYTSQICKGMEYLGTKR--YIHRDLA 172
Query: 184 AYRIVFDDDVNPRLSCFGLMKNSRDGRSY---STNLAF----TPPEYLRTGRVTPESVMY 236
I+ +++ ++ FGL K + Y PE L + + S ++
Sbjct: 173 TRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVW 232
Query: 237 SFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV----RLA--- 289
SFG +L +L + S + +R +GQ EL+ RL
Sbjct: 233 SFGVVLYELFTYIEKSKSPPAEFMRMIGNDK------QGQMIVFHLIELLKNNGRLPRPD 286
Query: 290 ----------SRCLQYEPRERPNPRSLVTALVTLQKDTE 318
+ C +RP+ R L + ++
Sbjct: 287 GCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQMA 325
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327 | Back alignment and structure |
|---|
Score = 70.4 bits (173), Expect = 2e-13
Identities = 56/278 (20%), Positives = 96/278 (34%), Gaps = 46/278 (16%)
Query: 73 VYKGKLEN------QFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEG 125
VY+G++ ++AVK FL EA + + ++ + +G +
Sbjct: 46 VYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 105
Query: 126 DERLLVAEYMPNDTLAKHL-----FHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
R ++ E M L L + + L VA IA +Y H
Sbjct: 106 LPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH--FIH 163
Query: 181 -DLNAYRIVFDDDVNPRLSC----FGLMKNSRD--GRSY---STNLAF----TPPEYLRT 226
D+ A R P FG+ +RD SY PPE
Sbjct: 164 RDIAA-RNCLLTCPGPGRVAKIGDFGM---ARDIYRASYYRKGGCAMLPVKWMPPEAFME 219
Query: 227 GRVTPESVMYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 281
G T ++ +SFG LL ++ S G L+ + +C
Sbjct: 220 GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPG------- 272
Query: 282 GTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 319
+ R+ ++C Q++P +RPN ++ + +D +V
Sbjct: 273 --PVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 308
|
| >1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1 Length = 118 | Back alignment and structure |
|---|
Score = 66.1 bits (162), Expect = 2e-13
Identities = 25/103 (24%), Positives = 46/103 (44%), Gaps = 1/103 (0%)
Query: 375 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALN 434
M++ K+KG+ A + +++CY++ I + + ++ RS +Y Q+A
Sbjct: 1 MEQVNELKEKGNKALSVGNIDDALQCYSEAIKLDPH-NHVLYSNRSAAYAKKGDYQKAYE 59
Query: 435 DASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILE 477
D + + P W +AAAL L + EA+ E E
Sbjct: 60 DGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHE 102
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295 | Back alignment and structure |
|---|
Score = 69.6 bits (171), Expect = 2e-13
Identities = 55/283 (19%), Positives = 97/283 (34%), Gaps = 49/283 (17%)
Query: 72 VVYKGKLE-----NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD 126
V + + +AVK+ S R F E + L++ + G C
Sbjct: 25 SVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG 84
Query: 127 ER--LLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
R L+ EY+P D L KH + + L+ I + +EY +K H
Sbjct: 85 RRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQYTSQICKGMEYLGTKR--YIH 137
Query: 181 -DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY---STNLAF----TPPEYLRTGRVTPE 232
DL I+ +++ ++ FGL K + + PE L + +
Sbjct: 138 RDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVA 197
Query: 233 SVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV----RL 288
S ++SFG +L +L + S + +R +GQ EL+ RL
Sbjct: 198 SDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDK------QGQMIVFHLIELLKNNGRL 251
Query: 289 A-------------SRCLQYEPRERPNPRSLVTALVTLQKDTE 318
+ C +RP+ R L + ++ +
Sbjct: 252 PRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 294
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318 | Back alignment and structure |
|---|
Score = 69.7 bits (171), Expect = 2e-13
Identities = 60/278 (21%), Positives = 96/278 (34%), Gaps = 43/278 (15%)
Query: 73 VYKGKLEN-----QFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGD 126
V + +AVK A P R + +E + L + + GCC +
Sbjct: 47 VSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAG 106
Query: 127 ER--LLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
LV EY+P D L +H L A I E + Y ++ H
Sbjct: 107 AASLQLVMEYVPLGSLRDYLPRHSIGLAQL-------LLFAQQICEGMAYLHAQH--YIH 157
Query: 181 -DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY---STNLAF----TPPEYLRTGRVTPE 232
DL A ++ D+D ++ FGL K +G Y + PE L+ +
Sbjct: 158 RDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYA 217
Query: 233 SVMYSFGTLLLDLLS--GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG-------- 282
S ++SFG L +LL+ P + +T L + G
Sbjct: 218 SDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELL--ERGERLPRPDK 275
Query: 283 --TELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 318
E+ L C + E RP +L+ L T+ + +
Sbjct: 276 CPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQ 313
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313 | Back alignment and structure |
|---|
Score = 69.6 bits (171), Expect = 3e-13
Identities = 53/276 (19%), Positives = 100/276 (36%), Gaps = 44/276 (15%)
Query: 73 VYKGKL----ENQFRIAVK--RFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD 126
V +G L ++AVK + + S+ + +FL EA + + + LLG C E
Sbjct: 50 VMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMS 109
Query: 127 -----ERLLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERA 177
+ +++ +M L + + L+ + IA +EY +++
Sbjct: 110 SQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN-- 167
Query: 178 LYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRD--GRSY---STNLAF----TPPEYLRTG 227
H DL A + DD+ ++ FGL S+ Y E L
Sbjct: 168 FLHRDLAARNCMLRDDMTVCVADFGL---SKKIYSGDYYRQGRIAKMPVKWIAIESLADR 224
Query: 228 RVTPESVMYSFGTLLLDLLS-GK----HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG 282
T +S +++FG + ++ + G + D + + + CL+
Sbjct: 225 VYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQPEDCLD-------- 276
Query: 283 TELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 318
EL + C + +P +RP L L L +
Sbjct: 277 -ELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLP 311
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613 | Back alignment and structure |
|---|
Score = 71.1 bits (174), Expect = 3e-13
Identities = 51/264 (19%), Positives = 94/264 (35%), Gaps = 30/264 (11%)
Query: 72 VVYKGKLEN---QFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDE 127
V +G Q +A+K + + + EA+ + QL N + L+G C+ +
Sbjct: 351 SVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG-VCQAEA 409
Query: 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYR 186
+LV E L K L + + + + ++ ++Y K H +L A
Sbjct: 410 LMLVMEMAGGGPLHKFLVGKREE-IPVSNVAELLHQVSMGMKYLEEKN--FVHRNLAARN 466
Query: 187 IVFDDDVNPRLSCFGLMKNSRDGRSYSTN-------LAFTPPEYLRTGRVTPESVMYSFG 239
++ + ++S FGL K SY T L + PE + + + S ++S+G
Sbjct: 467 VLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYG 526
Query: 240 TLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ 294
+ + LS P + I C EL L S C
Sbjct: 527 VTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPP---------ELYALMSDCWI 577
Query: 295 YEPRERPNPRSLVTALVTLQKDTE 318
Y+ +RP+ ++ +
Sbjct: 578 YKWEDRPDFLTVEQRMRACYYSLA 601
|
| >3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus} Length = 164 | Back alignment and structure |
|---|
Score = 66.7 bits (163), Expect = 3e-13
Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 1/96 (1%)
Query: 382 KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQV 441
K +G+ A K++ +I+ YTQ + + +P + R+ +Y S ++A DA A V
Sbjct: 15 KSEGNAAMARKEYSKAIDLYTQALSIAPA-NPIYLSNRAAAYSASGQHEKAAEDAELATV 73
Query: 442 ISPVWHMAAYLQAAALFALGKENEAQAALREASILE 477
+ P + A A F + A+ A + E
Sbjct: 74 VDPKYSKAWSRLGLARFDMADYKGAKEAYEKGIEAE 109
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373 | Back alignment and structure |
|---|
Score = 69.4 bits (170), Expect = 5e-13
Identities = 56/261 (21%), Positives = 100/261 (38%), Gaps = 38/261 (14%)
Query: 73 VYKGKL----ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDE 127
VY G L + AVK NR FL E + + + +LLG C +
Sbjct: 105 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG 164
Query: 128 -RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAY 185
L+V YM + L + + P + + L +A+ +++ SK+ H DL A
Sbjct: 165 SPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKFLASKK--FVHRDLAAR 221
Query: 186 RIVFDDDVNPRLSCFGLMKNSRD------GRSYSTNLAF-----TPPEYLRTGRVTPESV 234
+ D+ +++ FGL +RD ++ A E L+T + T +S
Sbjct: 222 NCMLDEKFTVKVADFGL---ARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSD 278
Query: 235 MYSFGTLLLDLLS-GK----HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289
++SFG LL +L++ G + + + C + L +
Sbjct: 279 VWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPD---------PLYEVM 329
Query: 290 SRCLQYEPRERPNPRSLVTAL 310
+C + RP+ LV+ +
Sbjct: 330 LKCWHPKAEMRPSFSELVSRI 350
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329 | Back alignment and structure |
|---|
Score = 68.5 bits (168), Expect = 7e-13
Identities = 65/290 (22%), Positives = 103/290 (35%), Gaps = 56/290 (19%)
Query: 73 VYKGKLENQF------RIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD 126
V+ + N +AVK ++ + F EA + L+++ + G C EG
Sbjct: 57 VFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGR 116
Query: 127 ERLLVAEYMPNDTLAKHL-------------FHWETQPMKWAMRLRVALHIAEALEYCTS 173
L+V EYM + L + L P+ L VA +A + Y
Sbjct: 117 PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG 176
Query: 174 KERALYH-DLNAYRIVFDDDVNPRLSC----FGLMKNSRD--GRSY---STNLAF----T 219
H DL R V L FG+ SRD Y
Sbjct: 177 LH--FVHRDLAT-RNCL---VGQGLVVKIGDFGM---SRDIYSTDYYRVGGRTMLPIRWM 227
Query: 220 PPEYLRTGRVTPESVMYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNIQTLTDSCLE 274
PPE + + T ES ++SFG +L ++ + GK + + A+D I +C
Sbjct: 228 PPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACPP 287
Query: 275 GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPSHVL 324
E+ + C Q EP++R + + + L L + V VL
Sbjct: 288 ---------EVYAIMRGCWQREPQQRHSIKDVHARLQALAQAPPVYLDVL 328
|
| >3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297 | Back alignment and structure |
|---|
Score = 67.3 bits (165), Expect = 1e-12
Identities = 58/281 (20%), Positives = 100/281 (35%), Gaps = 51/281 (18%)
Query: 73 VYKGKLEN------QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD 126
V+ + N + +AVK + F EA + L++ + G C +GD
Sbjct: 31 VFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGD 90
Query: 127 ERLLVAEYMPN--------------DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCT 172
++V EYM + L + + L +A IA + Y
Sbjct: 91 PLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLA 150
Query: 173 SKERALYH-DLNAYRIVFDDDVNPRLSC----FGLMKNSRDGRSYS--TNLAF----TPP 221
S+ H DL R V L FG+ ++ Y + PP
Sbjct: 151 SQH--FVHRDLAT-RNCL---VGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPP 204
Query: 222 EYLRTGRVTPESVMYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQ 276
E + + T ES ++SFG +L ++ + GK + + ++ I + C +
Sbjct: 205 ESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERPRVCPK-- 262
Query: 277 FSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317
E+ + C Q EP++R N + + L L K T
Sbjct: 263 -------EVYDVMLGCWQREPQQRLNIKEIYKILHALGKAT 296
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327 | Back alignment and structure |
|---|
Score = 67.6 bits (166), Expect = 1e-12
Identities = 50/265 (18%), Positives = 96/265 (36%), Gaps = 31/265 (11%)
Query: 72 VVYKGKL-----ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEG 125
VYKG + + +A+K + P A + L+EA + + N + LLG C
Sbjct: 30 TVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG-ICLT 88
Query: 126 DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNA 184
L+ + MP L ++ + L + IA+ + Y + L H DL A
Sbjct: 89 STVQLITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAA 145
Query: 185 YRIVFDDDVNPRLSCFGLMKNSRDGRSY--STNLAF----TPPEYLRTGRVTPESVMYSF 238
++ + +++ FGL K + E + T +S ++S+
Sbjct: 146 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 205
Query: 239 GTLLLDLLS-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 293
G + +L++ G IP S ++ C ++ + +C
Sbjct: 206 GVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTI---------DVYMIMRKCW 256
Query: 294 QYEPRERPNPRSLVTALVTLQKDTE 318
+ RP R L+ + +D +
Sbjct: 257 MIDADSRPKFRELIIEFSKMARDPQ 281
|
| >2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens} Length = 133 | Back alignment and structure |
|---|
Score = 63.8 bits (156), Expect = 1e-12
Identities = 23/96 (23%), Positives = 42/96 (43%), Gaps = 1/96 (1%)
Query: 382 KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQV 441
K KG+ F+ D+ +++ YT+ I ++ R+ Y Q AL D +
Sbjct: 20 KNKGNECFQKGDYPQAMKHYTEAIKRNPK-DAKLYSNRAACYTKLLEFQLALKDCEECIQ 78
Query: 442 ISPVWHMAAYLQAAALFALGKENEAQAALREASILE 477
+ P + +AAAL A+ +A ++A L+
Sbjct: 79 LEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLD 114
|
| >2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2 Length = 281 | Back alignment and structure |
|---|
Score = 66.5 bits (162), Expect = 2e-12
Identities = 23/103 (22%), Positives = 43/103 (41%), Gaps = 1/103 (0%)
Query: 382 KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQV 441
K++G+ F + + + CY + I + + R+L YL P++AL D +A
Sbjct: 8 KEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALE 66
Query: 442 ISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKSANA 484
+ A + + +EA A L+ A L ++ N
Sbjct: 67 LDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNF 109
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281 | Back alignment and structure |
|---|
Score = 66.1 bits (162), Expect = 3e-12
Identities = 55/263 (20%), Positives = 100/263 (38%), Gaps = 29/263 (11%)
Query: 72 VVYKGKLEN----QFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGD 126
VY+G N + +AVK + D ++ F+ EA + L + + L+G E +
Sbjct: 27 EVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIG-IIEEE 85
Query: 127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAY 185
++ E P L +L + + + +L I +A+ Y S H D+
Sbjct: 86 PTWIIMELYPYGELGHYLERNKNSLKVLTL-VLYSLQICKAMAYLESIN--CVHRDIAVR 142
Query: 186 RIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA-----FTPPEYLRTGRVTPESVMYSFGT 240
I+ +L FGL + D Y ++ + PE + R T S ++ F
Sbjct: 143 NILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAV 202
Query: 241 LLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQY 295
+ ++LS P + ++ + D C L L +RC Y
Sbjct: 203 CMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPP---------VLYTLMTRCWDY 253
Query: 296 EPRERPNPRSLVTALVTLQKDTE 318
+P +RP LV +L + + +
Sbjct: 254 DPSDRPRFTELVCSLSDVYQMEK 276
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291 | Back alignment and structure |
|---|
Score = 65.4 bits (160), Expect = 5e-12
Identities = 54/264 (20%), Positives = 98/264 (37%), Gaps = 32/264 (12%)
Query: 72 VVYKGKLENQFR---IAVK--RFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD 126
V KG + + +AVK + + + L EA + QL N + ++G CE +
Sbjct: 32 TVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIG-ICEAE 90
Query: 127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAY 185
+LV E L K+L + + +K + + ++ ++Y H DL A
Sbjct: 91 SWMLVMEMAELGPLNKYLQ--QNRHVKDKNIIELVHQVSMGMKYLEESN--FVHRDLAAR 146
Query: 186 RIVFDDDVNPRLSCFGLMKNSRDGRSY---STNLAF----TPPEYLRTGRVTPESVMYSF 238
++ ++S FGL K R +Y T+ + PE + + + +S ++SF
Sbjct: 147 NVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSF 206
Query: 239 GTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 293
G L+ + S P S ++ C E+ L + C
Sbjct: 207 GVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPR---------EMYDLMNLCW 257
Query: 294 QYEPRERPNPRSLVTALVTLQKDT 317
Y+ RP ++ L D
Sbjct: 258 TYDVENRPGFAAVELRLRNYYYDV 281
|
| >1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A Length = 166 | Back alignment and structure |
|---|
Score = 62.8 bits (153), Expect = 6e-12
Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Query: 382 KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQV 441
K + + F+ KD+ +I+ Y+Q I++ + + RSL+YL ++ AL DA++A
Sbjct: 17 KTQANDYFKAKDYENAIKFYSQAIEL-NPSNAIYYGNRSLAYLRTECYGYALGDATRAIE 75
Query: 442 ISPVWHMAAYLQAAALFALGKENEAQAALREASILE 477
+ + Y +AA+ ALGK A ++
Sbjct: 76 LDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVK 111
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 65.8 bits (161), Expect = 6e-12
Identities = 50/265 (18%), Positives = 97/265 (36%), Gaps = 31/265 (11%)
Query: 72 VVYKGKL-----ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEG 125
VYKG + + +A+K + P A + L+EA + + N + LLG C
Sbjct: 30 TVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLG-ICLT 88
Query: 126 DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNA 184
L+ + MP L ++ + L + IA+ + Y + L H DL A
Sbjct: 89 STVQLITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMNYLEDRR--LVHRDLAA 145
Query: 185 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSF 238
++ + +++ FGL K + + E + T +S ++S+
Sbjct: 146 RNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSY 205
Query: 239 GTLLLDLLS-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 293
G + +L++ G IP S ++ C ++ + +C
Sbjct: 206 GVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTI---------DVYMIMVKCW 256
Query: 294 QYEPRERPNPRSLVTALVTLQKDTE 318
+ RP R L+ + +D +
Sbjct: 257 MIDADSRPKFRELIIEFSKMARDPQ 281
|
| >4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans} Length = 126 | Back alignment and structure |
|---|
Score = 61.5 bits (150), Expect = 8e-12
Identities = 19/96 (19%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
Query: 382 KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQV 441
K KG+ F+ D+ ++ Y + + + ++ R+ Q AL+D
Sbjct: 17 KNKGNEYFKKGDYPTAMRHYNEAVKRDPE-NAILYSNRAACLTKLMEFQRALDDCDTCIR 75
Query: 442 ISPVWHMAAYLQAAALFALGKENEAQAALREASILE 477
+ + +AA L A+ + ++AQ A +A ++
Sbjct: 76 LDSKFIKGYIRKAACLVAMREWSKAQRAYEDALQVD 111
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 65.5 bits (160), Expect = 8e-12
Identities = 52/292 (17%), Positives = 99/292 (33%), Gaps = 54/292 (18%)
Query: 73 VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL---GCCCEGDER- 128
V+ GK + ++AVK F + + E + Q R N+L +G
Sbjct: 53 VWMGKWRGE-KVAVKVFF---TTEEASWFRE-TEIYQTVLMRHENILGFIAADIKGTGSW 107
Query: 129 ---LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEY------CTSKERALY 179
L+ +Y N +L +L ++ + L++A L + T + A+
Sbjct: 108 TQLYLITDYHENGSLYDYL---KSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIA 164
Query: 180 H-DLNAYRIVFDDDVNPRLSCFGL----MKNSRDGRSYSTNLAFTP----PEYLRTGRVT 230
H DL + I+ + ++ GL + ++ + T PE L +
Sbjct: 165 HRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLD-ESLN 223
Query: 231 PESV-------MYSFGTLLLDLLSGKHI--------PPSHALDLIRDRNIQTLTDSCLEG 275
MYSFG +L ++ P H L C++
Sbjct: 224 RNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKK 283
Query: 276 Q-------FSSDEGT-ELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 319
+SSDE ++ +L + C + P R + L + + ++
Sbjct: 284 LRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQDI 335
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325 | Back alignment and structure |
|---|
Score = 65.0 bits (159), Expect = 8e-12
Identities = 48/298 (16%), Positives = 103/298 (34%), Gaps = 35/298 (11%)
Query: 72 VVYKGKLENQFR-----IAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEG 125
V+KG + + +K + + Q + A+G L + + LLG C G
Sbjct: 28 TVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLG-LCPG 86
Query: 126 DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNA 184
LV +Y+P +L H+ + + L + IA+ + Y + H +L A
Sbjct: 87 SSLQLVTQYLPLGSLLDHV-RQHRGALGPQLLLNWGVQIAKGMYYLEEHG--MVHRNLAA 143
Query: 185 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESVMYSF 238
++ +++ FG+ + + E + G+ T +S ++S+
Sbjct: 144 RNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSY 203
Query: 239 GTLLLDLLS-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 293
G + +L++ G + + DL+ C ++ + +C
Sbjct: 204 GVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICTI---------DVYMVMVKCW 254
Query: 294 QYEPRERPNPRSLVTALVTLQKD----TEVPSHVLMGIPHGAAALPLSPLGDACLRMD 347
+ RP + L + +D + GI G L+ + ++
Sbjct: 255 MIDENIRPTFKELANEFTRMARDPPRYLVIKRESGPGIAPGPEPHGLTNKKLEEVELE 312
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287 | Back alignment and structure |
|---|
Score = 64.6 bits (158), Expect = 9e-12
Identities = 50/268 (18%), Positives = 92/268 (34%), Gaps = 38/268 (14%)
Query: 72 VVYKGKL---ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDE 127
V +G + Q +A+K + + + EA+ + QL N + L+G C+ +
Sbjct: 25 SVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG-VCQAEA 83
Query: 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYR 186
+LV E L K L + + + + ++ ++Y K H DL A
Sbjct: 84 LMLVMEMAGGGPLHKFLVGKREE-IPVSNVAELLHQVSMGMKYLEEKN--FVHRDLAARN 140
Query: 187 IVFDDDVNPRLSC----FGLMKNSRDGRSY---STNLAF----TPPEYLRTGRVTPESVM 235
++ + R FGL K SY + + PE + + + S +
Sbjct: 141 VL----LVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDV 196
Query: 236 YSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290
+S+G + + LS P + I C EL L S
Sbjct: 197 WSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPP---------ELYALMS 247
Query: 291 RCLQYEPRERPNPRSLVTALVTLQKDTE 318
C Y+ +RP+ ++ +
Sbjct: 248 DCWIYKWEDRPDFLTVEQRMRACYYSLA 275
|
| >3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B* Length = 137 | Back alignment and structure |
|---|
Score = 61.6 bits (150), Expect = 1e-11
Identities = 22/96 (22%), Positives = 40/96 (41%), Gaps = 1/96 (1%)
Query: 382 KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQV 441
K++G+ F + + + CY + I + + R+L YL P++AL D +A
Sbjct: 13 KEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALE 71
Query: 442 ISPVWHMAAYLQAAALFALGKENEAQAALREASILE 477
+ A + + +EA A L+ A L
Sbjct: 72 LDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLA 107
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 Length = 477 | Back alignment and structure |
|---|
Score = 65.1 bits (159), Expect = 2e-11
Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
Query: 373 GQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEA 432
G ++ K + + F+ KD+ +I+ Y+Q I++ + + RSL+YL ++ A
Sbjct: 1 GALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYA 59
Query: 433 LNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENK 479
L DA++A + + Y +AA+ ALGK A ++
Sbjct: 60 LGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPH 106
|
| >2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1 Length = 131 | Back alignment and structure |
|---|
Score = 60.3 bits (147), Expect = 2e-11
Identities = 25/99 (25%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 382 KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPT---AFARRSLSYLMSDMPQEALNDASQ 438
K +G+ + ++F A++ Y + I++ +P F R+ +Y A+ D +
Sbjct: 16 KTEGNEQMKVENFEAAVHFYGKAIEL----NPANAVYFCNRAAAYSKLGNYAGAVQDCER 71
Query: 439 AQVISPVWHMAAYLQAAALFALGKENEAQAALREASILE 477
A I P + A AL +L K EA A ++A L+
Sbjct: 72 AICIDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELD 110
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327 | Back alignment and structure |
|---|
Score = 63.5 bits (155), Expect = 3e-11
Identities = 57/278 (20%), Positives = 104/278 (37%), Gaps = 45/278 (16%)
Query: 73 VYKGKLENQF---RIAVKRFNRSAWPDARQ-FLEEARAVGQL-RNRRLANLLGCCCEGDE 127
V K +++ A+KR A D + F E + +L + + NLLG C
Sbjct: 41 VLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGY 100
Query: 128 RLLVAEYMPNDTLAKHL--------------FHWETQPMKWAMRLRVALHIAEALEYCTS 173
L EY P+ L L + + L A +A ++Y +
Sbjct: 101 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ 160
Query: 174 KERALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY--STNLAF----TPPEYLRT 226
K+ H DL A I+ ++ +++ FGL SR Y T E L
Sbjct: 161 KQ--FIHRDLAARNILVGENYVAKIADFGL---SRGQEVYVKKTMGRLPVRWMAIESLNY 215
Query: 227 GRVTPESVMYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 281
T S ++S+G LL +++S G + + + + +C +
Sbjct: 216 SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDD------- 268
Query: 282 GTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 319
E+ L +C + +P ERP+ ++ +L + ++ +
Sbjct: 269 --EVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKT 304
|
| >2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 148 | Back alignment and structure |
|---|
Score = 59.7 bits (145), Expect = 5e-11
Identities = 23/98 (23%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Query: 382 KKKGDVAFRHKDFRASIECYTQFIDV--GTMVSPTAFARRSLSYLMSDMPQEALNDASQA 439
+K+G+ F+ D+ ++ YTQ + + R+ +L + +A +AS+A
Sbjct: 32 RKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKA 91
Query: 440 QVISPVWHMAAYLQAAALFALGKENEAQAALREASILE 477
A Y ++ AL LG+ ++A L+ LE
Sbjct: 92 IEKDGGDVKALYRRSQALEKLGRLDQAVLDLQRCVSLE 129
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302 | Back alignment and structure |
|---|
Score = 62.7 bits (153), Expect = 5e-11
Identities = 50/275 (18%), Positives = 101/275 (36%), Gaps = 45/275 (16%)
Query: 73 VYKGKLE-----NQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGD 126
V + + ++AVK + + +E + L + + G C E
Sbjct: 37 VELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDG 96
Query: 127 ER--LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLN 183
L+ E++P+ +L ++L + + + +L+ A+ I + ++Y S++ H DL
Sbjct: 97 GNGIKLIMEFLPSGSLKEYLPKNKNK-INLKQQLKYAVQICKGMDYLGSRQ--YVHRDLA 153
Query: 184 AYRIVFDDDVNPRLSCFGLMKNSRDGRSY---STNLAF----TPPEYLRTGRVTPESVMY 236
A ++ + + ++ FGL K + Y + PE L + S ++
Sbjct: 154 ARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVW 213
Query: 237 SFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV----RLAS- 290
SFG L +LL+ AL L GQ + + RL
Sbjct: 214 SFGVTLHELLTYCDSDSSPMALFLKMIGPTH--------GQMTVTRLVNTLKEGKRLPCP 265
Query: 291 ------------RCLQYEPRERPNPRSLVTALVTL 313
+C +++P R + ++L+ L
Sbjct: 266 PNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL 300
|
| >3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289 | Back alignment and structure |
|---|
Score = 62.2 bits (152), Expect = 6e-11
Identities = 54/275 (19%), Positives = 98/275 (35%), Gaps = 52/275 (18%)
Query: 73 VYKGKLENQF------RIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEG 125
VYKG L +A+K A R+ F EA +L++ + LLG +
Sbjct: 25 VYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKD 84
Query: 126 DERLLVAEYMPN--------------DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYC 171
++ Y + D + ++ + + IA +EY
Sbjct: 85 QPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYL 144
Query: 172 TSKERALYH-DLNAYRIVFDDDVNPRLSC----FGLMKNSRDGRSYSTNLA------FTP 220
+S + H DL A R V V +L+ GL + Y +
Sbjct: 145 SSHH--VVHKDL-ATRNVL---VYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMA 198
Query: 221 PEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP-PSHA----LDLIRDRNIQTLTDSCLEG 275
PE + G+ + +S ++S+G +L ++ S P ++ +++IR+R + D C
Sbjct: 199 PEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCPDDCPA- 257
Query: 276 QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
+ L C P RP + + + L
Sbjct: 258 --------WVYALMIECWNEFPSRRPRFKDIHSRL 284
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382 | Back alignment and structure |
|---|
Score = 62.4 bits (152), Expect = 9e-11
Identities = 57/282 (20%), Positives = 101/282 (35%), Gaps = 47/282 (16%)
Query: 73 VYKGKL--------ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRN-RRLANLLGCC 122
V + ++AVK A + E + + + + NLLG C
Sbjct: 85 VVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGAC 144
Query: 123 CEGDERLLVAEYMPNDTLAKHL--------------FHWETQPMKWAMRLRVALHIAEAL 168
+ ++ EY L ++L H + + + A +A +
Sbjct: 145 TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGM 204
Query: 169 EYCTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY--STNLAF----TPP 221
EY SK+ H DL A ++ +D +++ FGL ++ Y +TN P
Sbjct: 205 EYLASKK--CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP 262
Query: 222 EYLRTGRVTPESVMYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQ 276
E L T +S ++SFG LL ++ + G +P L+++ + +C
Sbjct: 263 EALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTN-- 320
Query: 277 FSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 318
EL + C P +RP + LV L + T
Sbjct: 321 -------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTS 355
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334 | Back alignment and structure |
|---|
Score = 61.9 bits (151), Expect = 9e-11
Identities = 55/292 (18%), Positives = 107/292 (36%), Gaps = 47/292 (16%)
Query: 73 VYKGKL--------ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQL-RNRRLANLLGCC 122
V + + +AVK A + E + + +++ + NLLG C
Sbjct: 51 VVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 110
Query: 123 CEGDERLLVAEYMPNDTLAKHL--------------FHWETQPMKWAMRLRVALHIAEAL 168
+ ++ EY L ++L + M + + +A +
Sbjct: 111 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGM 170
Query: 169 EYCTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY--STNLAF----TPP 221
EY S++ H DL A ++ ++ +++ FGL ++ + Y +TN P
Sbjct: 171 EYLASQK--CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAP 228
Query: 222 EYLRTGRVTPESVMYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNIQTLTDSCLEGQ 276
E L T +S ++SFG L+ ++ + G IP L+++ + +C
Sbjct: 229 EALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTN-- 286
Query: 277 FSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPSHVLMGIP 328
EL + C P +RP + LV L + T ++ + P
Sbjct: 287 -------ELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTNEEYLDLSQP 331
|
| >3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae} Length = 126 | Back alignment and structure |
|---|
Score = 58.1 bits (141), Expect = 1e-10
Identities = 19/96 (19%), Positives = 38/96 (39%), Gaps = 1/96 (1%)
Query: 382 KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQV 441
+ +G F D+ +++ YT+ I ++ R+ + EA+ D ++A
Sbjct: 8 RLEGKEYFTKSDWPNAVKAYTEMIKRAPE-DARGYSNRAAALAKLMSFPEAIADCNKAIE 66
Query: 442 ISPVWHMAAYLQAAALFALGKENEAQAALREASILE 477
P + A +A A A+ + A L A +
Sbjct: 67 KDPNFVRAYIRKATAQIAVKEYASALETLDAARTKD 102
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342 | Back alignment and structure |
|---|
Score = 61.3 bits (149), Expect = 2e-10
Identities = 47/292 (16%), Positives = 99/292 (33%), Gaps = 54/292 (18%)
Query: 73 VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL---GCCCEGD--- 126
V++GK + +AVK F+ + R + E + Q R N+L + +
Sbjct: 58 VWRGKWRGE-EVAVKIFS---SREERSWFRE-AEIYQTVMLRHENILGFIAADNKDNGTW 112
Query: 127 -ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEY------CTSKERALY 179
+ LV++Y + +L +L + +++AL A L + T + A+
Sbjct: 113 TQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIA 169
Query: 180 H-DLNAYRIVFDDDVNPRLSCFGL----MKNSRDGRSYSTNLAFTP----PEYLRTGRVT 230
H DL + I+ + ++ GL + + T PE L +
Sbjct: 170 HRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLD-DSIN 228
Query: 231 PESV-------MYSFGTLLLDLLSGKHI---PPSHAL---DLI-RDRNIQTLTDS-CLEG 275
+ +Y+ G + ++ I + L DL+ D +++ + C +
Sbjct: 229 MKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQK 288
Query: 276 Q--------FSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 319
S + + ++ C R + L L + +
Sbjct: 289 LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEGI 340
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343 | Back alignment and structure |
|---|
Score = 61.2 bits (149), Expect = 2e-10
Identities = 67/296 (22%), Positives = 105/296 (35%), Gaps = 60/296 (20%)
Query: 73 VYKGKLENQF------RIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEG 125
V++ + +AVK A D + F EA + + N + LLG C G
Sbjct: 63 VFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVG 122
Query: 126 DERLLVAEYMPNDTLAKHL----------------------FHWETQPMKWAMRLRVALH 163
L+ EYM L + L P+ A +L +A
Sbjct: 123 KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQ 182
Query: 164 IAEALEYCTSKERALYH-DLNAYRIVFDDDVNPRLSC----FGLMKNSRDGRSY--STNL 216
+A + Y + ++ H DL A R V + FGL +N Y N
Sbjct: 183 VAAGMAYLSERK--FVHRDL-ATRNCL---VGENMVVKIADFGLSRNIYSADYYKADGND 236
Query: 217 AF----TPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNIQT 267
A PPE + R T ES ++++G +L ++ S G + + +RD NI
Sbjct: 237 AIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILA 296
Query: 268 LTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPSHV 323
++C EL L C P +RP+ S+ L + + E V
Sbjct: 297 CPENCPL---------ELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAEGTVGV 343
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 3e-10
Identities = 55/274 (20%), Positives = 101/274 (36%), Gaps = 34/274 (12%)
Query: 73 VYKGKL-----ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDE 127
V + +AVK+ S R F E + + L + + G
Sbjct: 39 VELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGR 98
Query: 128 R--LLVAEYMPN----DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHD 181
+ LV EY+P+ D L +H + + L + I + +EY S+ R ++ D
Sbjct: 99 QSLRLVMEYLPSGCLRDFLQRHRARLDASRL-----LLYSSQICKGMEYLGSR-RCVHRD 152
Query: 182 LNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY---STNLAF----TPPEYLRTGRVTPESV 234
L A I+ + + + +++ FGL K + Y PE L + +S
Sbjct: 153 LAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSD 212
Query: 235 MYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG----------TE 284
++SFG +L +L + S + + +R + + +EG E
Sbjct: 213 VWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAPPACPAE 272
Query: 285 LVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 318
+ L C P++RP+ +L L L +
Sbjct: 273 VHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSR 306
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370 | Back alignment and structure |
|---|
Score = 60.4 bits (147), Expect = 4e-10
Identities = 58/281 (20%), Positives = 97/281 (34%), Gaps = 61/281 (21%)
Query: 73 VYKGKL--------ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQL-RNRRLANLLGCC 122
V + + +AVK A + E + + +++ + NLLG C
Sbjct: 97 VVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 156
Query: 123 CEGDERLLVAEYMPNDTLAKHL--------------FHWETQPMKWAMRLRVALHIAEAL 168
+ ++ EY L ++L + M + + +A +
Sbjct: 157 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGM 216
Query: 169 EYCTSKERALYH-DLNAYRIVFDDDVNPRLSC----FGLMKNSRD--GRSY---STNLAF 218
EY S++ H DL A R V V FGL +RD Y +TN
Sbjct: 217 EYLASQK--CIHRDL-AARNVL---VTENNVMKIADFGL---ARDINNIDYYKKTTNGRL 267
Query: 219 ----TPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNIQTLT 269
PE L T +S ++SFG L+ ++ + G IP L+++ +
Sbjct: 268 PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKP 327
Query: 270 DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
+C EL + C P +RP + LV L
Sbjct: 328 ANCTN---------ELYMMMRDCWHAVPSQRPTFKQLVEDL 359
|
| >2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae} Length = 111 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 7e-10
Identities = 14/99 (14%), Positives = 40/99 (40%), Gaps = 2/99 (2%)
Query: 375 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALN 434
M + K++G+ F+ +R ++ CY Q I +P ++ ++++ + +A+
Sbjct: 1 MSQFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQ-NPVGYSNKAMALIKLGEYTQAIQ 59
Query: 435 DASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREA 473
Q + +++ + L A +++
Sbjct: 60 MCQQGLRYTSTA-EHVAIRSKLQYRLELAQGAVGSVQIP 97
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301 | Back alignment and structure |
|---|
Score = 58.9 bits (143), Expect = 8e-10
Identities = 36/199 (18%), Positives = 71/199 (35%), Gaps = 38/199 (19%)
Query: 73 VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL---GCCCEGD--- 126
V++G + + +AVK F+ D + + E + R N+L
Sbjct: 24 VWRGSWQGE-NVAVKIFS---SRDEKSWFRE-TELYNTVMLRHENILGFIASDMTSRHSS 78
Query: 127 -ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEY------CTSKERALY 179
+ L+ Y +L +L + + LR+ L IA L + T + A+
Sbjct: 79 TQLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIA 135
Query: 180 H-DLNAYRIVFDDDVNPRLSCFGL----MKNSRDGRSYSTNLAFTP----PEYLRTGRVT 230
H DL + I+ + ++ GL +++ + T PE L +
Sbjct: 136 HRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLD-ETIQ 194
Query: 231 PESV-------MYSFGTLL 242
+ +++FG +L
Sbjct: 195 VDCFDSYKRVDIWAFGLVL 213
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291 | Back alignment and structure |
|---|
Score = 58.4 bits (142), Expect = 1e-09
Identities = 57/261 (21%), Positives = 97/261 (37%), Gaps = 36/261 (13%)
Query: 72 VVYKGKL----ENQFRIAVK--RFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCE 124
VV +G+ +AVK + + + P+A F+ E A+ L +R L L G
Sbjct: 33 VVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYG-VVL 91
Query: 125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLN 183
+V E P +L L R A+ +AE + Y SK H DL
Sbjct: 92 TPPMKMVTELAPLGSLLDRL-RKHQGHFLLGTLSRYAVQVAEGMGYLESKR--FIHRDLA 148
Query: 184 AYRIVFDDDVNPRLSCFGLMKNSRDGRSY---STNLAF----TPPEYLRTGRVTPESVMY 236
A ++ ++ FGLM+ + + PE L+T + S +
Sbjct: 149 ARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTW 208
Query: 237 SFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLT--DSCLEGQFSSDEGTELVRLA 289
FG L ++ + P S L I D+ + L + C + ++ +
Sbjct: 209 MFGVTLWEMFTYGQEPWIGLNGSQILHKI-DKEGERLPRPEDCPQ---------DIYNVM 258
Query: 290 SRCLQYEPRERPNPRSLVTAL 310
+C ++P +RP +L L
Sbjct: 259 VQCWAHKPEDRPTFVALRDFL 279
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314 | Back alignment and structure |
|---|
Score = 58.4 bits (142), Expect = 1e-09
Identities = 62/282 (21%), Positives = 104/282 (36%), Gaps = 58/282 (20%)
Query: 73 VYKGKL------ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEG 125
V K +AVK +A P + L E + Q+ + + L G C +
Sbjct: 39 VVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQD 98
Query: 126 DERLLVAEYMPNDTLAKHL----------------------FHWETQPMKWAMRLRVALH 163
LL+ EY +L L H + + + + A
Sbjct: 99 GPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQ 158
Query: 164 IAEALEYCTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRD--GRSY---STNLA 217
I++ ++Y + L H DL A I+ + ++S FGL SRD +
Sbjct: 159 ISQGMQYLAEMK--LVHRDLAARNILVAEGRKMKISDFGL---SRDVYEEDSYVKRSQGR 213
Query: 218 F----TPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKH----IPPSHALDLIRDRNIQTL 268
E L T +S ++SFG LL ++++ G + IPP +L++ +
Sbjct: 214 IPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMER 273
Query: 269 TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
D+C E E+ RL +C + EP +RP + L
Sbjct: 274 PDNCSE---------EMYRLMLQCWKQEPDKRPVFADISKDL 306
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333 | Back alignment and structure |
|---|
Score = 58.4 bits (142), Expect = 2e-09
Identities = 52/285 (18%), Positives = 92/285 (32%), Gaps = 58/285 (20%)
Query: 73 VYKGKL------ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRN-RRLANLLGCCCE 124
V + + ++AVK +A D ++ + E + + L + NLLG C
Sbjct: 62 VVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTH 121
Query: 125 GDERLLVAEYMPN------------DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCT 172
G L++ EY F L + +A+ + +
Sbjct: 122 GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA 181
Query: 173 SKERALYH-DLNAYRIVFDDDVNPRLSC----FGLMKNSRD--GRSY---STNLAF---- 218
SK H D+ A R V + FGL +RD S N
Sbjct: 182 SKN--CIHRDVAA-RNVL---LTNGHVAKIGDFGL---ARDIMNDSNYIVKGNARLPVKW 232
Query: 219 TPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP----PSHA--LDLIRDRNIQTLTDSC 272
PE + T +S ++S+G LL ++ S P ++ L++D
Sbjct: 233 MAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFA 292
Query: 273 LEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317
+ + + C EP RP + + + L ++
Sbjct: 293 PK---------NIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 328
|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} Length = 514 | Back alignment and structure |
|---|
Score = 58.2 bits (141), Expect = 3e-09
Identities = 21/105 (20%), Positives = 44/105 (41%), Gaps = 6/105 (5%)
Query: 382 KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFA--RRSLSYLMSDMPQEALNDASQA 439
K KG+ FR+K + +I+ Y +++ S Y+ ++ + +++A
Sbjct: 10 KDKGNQFFRNKKYDDAIKYYNWALEL----KEDPVFYSNLSACYVSVGDLKKVVEMSTKA 65
Query: 440 QVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKSANA 484
+ P + +A+A LGK +A L S+ + A+
Sbjct: 66 LELKPDYSKVLLRRASANEGLGKFADAMFDLSVLSLNGDFNDASI 110
|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} Length = 514 | Back alignment and structure |
|---|
Score = 44.0 bits (104), Expect = 9e-05
Identities = 10/102 (9%), Positives = 31/102 (30%), Gaps = 2/102 (1%)
Query: 383 KKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVI 442
+ D + + + + + + + + R + +A D +A+ +
Sbjct: 275 YMALIMADRNDSTEYYNYFDKALKLDSN-NSSVYYHRGQMNFILQNYDQAGKDFDKAKEL 333
Query: 443 SPVWHMAAYLQAAALFALGKENEAQAALREASILENKKSANA 484
P A + K ++ + EA + ++
Sbjct: 334 DPENIFPYIQLACLAYRENKFDDCETLFSEA-KRKFPEAPEV 374
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371 | Back alignment and structure |
|---|
Score = 57.4 bits (138), Expect = 3e-09
Identities = 39/280 (13%), Positives = 68/280 (24%), Gaps = 49/280 (17%)
Query: 72 VVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNR---RLANLLGCCCE 124
VV+ + +E A+K F A + + E A +L +
Sbjct: 77 VVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLP 136
Query: 125 GD-----------------------ERLLVAEYMPND--TLAKHLFHWETQ--PMKWAMR 157
D LL+ D L L
Sbjct: 137 SDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGILAL 196
Query: 158 LRVALHIAEALEYCTSKERALYH-DL---NAYRIVFDDDVNPRLSCFGL-MKNSRDGRSY 212
+ + SK L H N + D L K G +
Sbjct: 197 HILTAQLIRLAANLQSKG--LVHGHFTPDN---LFIMPDGRLMLGDVSALWKVGTRGPAS 251
Query: 213 STNLAFTPPEYL--RTGRVTPESVMYSFGTLLLDLLSGK---HIPPSHALDLIRDRNIQT 267
S + + P E+L T T + G + + + + +++
Sbjct: 252 SVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRV 311
Query: 268 LTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLV 307
L + + L R L ++ R R P +
Sbjct: 312 PGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAM 351
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313 | Back alignment and structure |
|---|
Score = 56.9 bits (138), Expect = 4e-09
Identities = 56/290 (19%), Positives = 95/290 (32%), Gaps = 62/290 (21%)
Query: 73 VYKGKL------ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRN-RRLANLLGCCCE 124
V + + +AVK SA R+ + E + + L N + NLLG C
Sbjct: 39 VVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTI 98
Query: 125 GDERLLVAEYMPNDTLAKHL----------------FHWETQPMKWAMRLRVALHIAEAL 168
G L++ EY L L + + L + +A+ +
Sbjct: 99 GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGM 158
Query: 169 EYCTSKERALYH-DLNAYRIVFDDDVNPRLSC----FGLMKNSRD--GRSY---STNLAF 218
+ SK H DL A R + + FGL +RD S N
Sbjct: 159 AFLASKN--CIHRDLAA-RNIL---LTHGRITKICDFGL---ARDIKNDSNYVVKGNARL 209
Query: 219 ----TPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP----PSHA--LDLIRDRNIQTL 268
PE + T ES ++S+G L +L S P P + +I++
Sbjct: 210 PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLS 269
Query: 269 TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 318
+ E+ + C +P +RP + +V + ++
Sbjct: 270 PEHAPA---------EMYDIMKTCWDADPLKRPTFKQIVQLIEKQISEST 310
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 5e-09
Identities = 44/249 (17%), Positives = 87/249 (34%), Gaps = 25/249 (10%)
Query: 73 VYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCC---CEGD 126
VYKG E +A + ++F EEA + L++ + +G
Sbjct: 42 VYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGK 101
Query: 127 ERL-LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNA 184
+ + LV E M + TL +L + MK + I + L++ ++ + H DL
Sbjct: 102 KCIVLVTELMTSGTLKTYL--KRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKC 159
Query: 185 YRIVFD-DDVNPRLSCFGLMKNSRDGRSYST--NLAFTPPEYLRTGRVTPESVMYSFGTL 241
I + ++ GL R + + F PE +Y+FG
Sbjct: 160 DNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEEK-YDESVDVYAFGMC 218
Query: 242 LLDLLSGKH----IPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEP 297
+L++ + ++ + + +T F E+ + C++
Sbjct: 219 MLEMATSEYPYSECQNAAQIYRR-------VTSGVKPASFDKVAIPEVKEIIEGCIRQNK 271
Query: 298 RERPNPRSL 306
ER + + L
Sbjct: 272 DERYSIKDL 280
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450 | Back alignment and structure |
|---|
Score = 56.2 bits (136), Expect = 1e-08
Identities = 18/100 (18%), Positives = 39/100 (39%), Gaps = 1/100 (1%)
Query: 374 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEAL 433
+ E + + AF D+ A+I + ++V R+ ++ P++A+
Sbjct: 139 KSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEVCVW-DAELRELRAECFIKEGEPRKAI 197
Query: 434 NDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREA 473
+D A + A Y + + LG + + +RE
Sbjct: 198 SDLKAASKLKNDNTEAFYKISTLYYQLGDHELSLSEVREC 237
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450 | Back alignment and structure |
|---|
Score = 48.5 bits (116), Expect = 3e-06
Identities = 18/106 (16%), Positives = 38/106 (35%), Gaps = 7/106 (6%)
Query: 373 GQMQETLNS----KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDM 428
+++ + G ++ + +D + A+ RR+ +L
Sbjct: 17 NLYFQSMADVEKHLELGKKLLAAGQLADALSQFHAAVDGDPD-NYIAYYRRATVFLAMGK 75
Query: 429 PQEALNDASQAQVISPVWHMAAYLQAA-ALFALGKENEAQAALREA 473
+ AL D ++ + AA LQ L GK +EA+ ++
Sbjct: 76 SKAALPDLTKVIQLKM-DFTAARLQRGHLLLKQGKLDEAEDDFKKV 120
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 3e-04
Identities = 16/115 (13%), Positives = 34/115 (29%), Gaps = 4/115 (3%)
Query: 373 GQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDV---GTMVSPTAFARRSLSYLMSDMP 429
Q+++ + + R + + Y + + + R + + P
Sbjct: 252 KQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSIAEYTVRSKERICHCFSKDEKP 311
Query: 430 QEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKSANA 484
EA+ S+ + P A +A A +EA A N+
Sbjct: 312 VEAIRVCSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYETA-QEHNENDQQI 365
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316 | Back alignment and structure |
|---|
Score = 55.0 bits (133), Expect = 2e-08
Identities = 48/282 (17%), Positives = 93/282 (32%), Gaps = 47/282 (16%)
Query: 73 VYKGKL------ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQL-RNRRLANLLGCCCE 124
V + +AVK A + + E + + + + + NLLG C +
Sbjct: 43 VIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK 102
Query: 125 GDE-RLLVAEYMPNDTLAKHL--------------FHWETQPMKWAMRLRVALHIAEALE 169
+++ E+ L+ +L + + + +A+ +E
Sbjct: 103 PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGME 162
Query: 170 YCTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY--STNLAF----TPPE 222
+ S++ H DL A I+ + ++ FGL ++ Y + PE
Sbjct: 163 FLASRK--CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 220
Query: 223 YLRTGRVTPESVMYSFGTLLLDLLSGKHIP------PSHALDLIRDRNIQTLTDSCLEGQ 276
+ T +S ++SFG LL ++ S P +++ D
Sbjct: 221 TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTP-- 278
Query: 277 FSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 318
E+ + C EP +RP LV L L +
Sbjct: 279 -------EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 313
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432 | Back alignment and structure |
|---|
Score = 55.2 bits (133), Expect = 2e-08
Identities = 46/260 (17%), Positives = 85/260 (32%), Gaps = 53/260 (20%)
Query: 72 VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLG--------CCC 123
+VY+G +N+ +AVKR + A + E + L C
Sbjct: 40 IVYRGMFDNR-DVAVKRILPECFSFADR---EVQL--------LRESDEHPNVIRYFCTE 87
Query: 124 EGDERL-LVAEYMP----NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERAL 178
+ + + E K H +P+ ++ L + S +
Sbjct: 88 KDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPIT-LLQ-----QTTSGLAHLHSLN--I 139
Query: 179 YH-DLNAYRIVF-----DDDVNPRLSCFGLMKNSRDGRSYSTNLAF---TP----PEYLR 225
H DL + I+ + +S FGL K GR + + T PE L
Sbjct: 140 VHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLS 199
Query: 226 ---TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEG-QFSSDE 281
T ++S G + ++S P +L + + + CL +
Sbjct: 200 EDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVI 259
Query: 282 GTELVRLASRCLQYEPRERP 301
EL+ + + +P++RP
Sbjct: 260 ARELIE---KMIAMDPQKRP 276
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377 | Back alignment and structure |
|---|
Score = 54.6 bits (131), Expect = 3e-08
Identities = 31/198 (15%), Positives = 56/198 (28%), Gaps = 36/198 (18%)
Query: 127 ERLLVAEYMPND--TLAKHLFHWETQ--PMKWAMRLRVALHIAEALEYCTSKERALYH-D 181
R + M ++ T + L + + RL++ L + L L H
Sbjct: 174 SRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH--YGLVHTY 231
Query: 182 L---NAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYL-----------RTG 227
L + IV D L+ F + S + F PPE R
Sbjct: 232 LRPVD---IVLDQRGGVFLTGFEHLVRDGARVVSSVSRGFEPPELEARRATISYHRDRRT 288
Query: 228 RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFS-SDEGTELV 286
+T ++ G ++ + P I ++ + L+
Sbjct: 289 LMTFSFDAWALGLVIYWIWCAD--LP------ITKDAALGGSEWIFRSCKNIPQPVRALL 340
Query: 287 RLASRCLQYEPRERPNPR 304
L+Y +R P
Sbjct: 341 E---GFLRYPKEDRLLPL 355
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413 | Back alignment and structure |
|---|
Score = 53.5 bits (128), Expect = 7e-08
Identities = 34/225 (15%), Positives = 59/225 (26%), Gaps = 35/225 (15%)
Query: 129 LLVAEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DL--- 182
L T + L + + RL++ L + L L H L
Sbjct: 183 LYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH--YGLVHTYLRPV 240
Query: 183 NAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYL----------RTGRVTPE 232
+ IV D L+ F + F PPE +T
Sbjct: 241 D---IVLDQRGGVFLTGFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFA 297
Query: 233 SVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT--ELVRLAS 290
++ G + + P+ + E F S + + L
Sbjct: 298 FDTWTLGLAIYWIWCAD--LPNTDDAALGG----------SEWIFRSCKNIPQPVRALLE 345
Query: 291 RCLQYEPRERPNPRSLVTALVTLQKDTEVPSHVLMGIPHGAAALP 335
L+Y +R P + Q TE+ + + + G
Sbjct: 346 GFLRYPKEDRLLPLQAMETPEYEQLRTELSAALPLYQTDGEPTRE 390
|
| >1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A Length = 131 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 1e-07
Identities = 15/108 (13%), Positives = 36/108 (33%), Gaps = 8/108 (7%)
Query: 382 KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQV 441
K+ G+ A++ KDF +++ Y + ++ + T ++ Y + +A
Sbjct: 8 KELGNDAYKKKDFDTALKHYDKAKELDP-TNMTYITNQAAVYFEKGDYNKCRELCEKAIE 66
Query: 442 ISPVWHMA------AYLQ-AAALFALGKENEAQAALREASILENKKSA 482
+ AY + + F K +A ++
Sbjct: 67 VGRENREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHRTPDV 114
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} Length = 359 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 1e-07
Identities = 18/100 (18%), Positives = 39/100 (39%), Gaps = 1/100 (1%)
Query: 374 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEAL 433
+ E + + AF D+ A+I + ++V R+ ++ P++A+
Sbjct: 116 KADEMQRLRSQALDAFDGADYTAAITFLDKILEVCVW-DAELRELRAECFIKEGEPRKAI 174
Query: 434 NDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREA 473
+D A + A Y + + LG + + +RE
Sbjct: 175 SDLKAASKLKSDNTEAFYKISTLYYQLGDHELSLSEVREC 214
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} Length = 359 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 3e-05
Identities = 19/96 (19%), Positives = 35/96 (36%), Gaps = 9/96 (9%)
Query: 382 KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPT---AFARRSLSYLMSDMPQEALNDASQ 438
+ G ++ + +D P A+ RR+ +L + AL D ++
Sbjct: 7 LELGKKLLAAGQLADALSQFHAAVDG----DPDNYIAYYRRATVFLAMGKSKAALPDLTK 62
Query: 439 AQVISPVWHMAAYLQ-AAALFALGKENEAQAALREA 473
+ AA LQ L GK +EA+ ++
Sbjct: 63 VIALKMD-FTAARLQRGHLLLKQGKLDEAEDDFKKV 97
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} Length = 359 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 2e-04
Identities = 16/115 (13%), Positives = 34/115 (29%), Gaps = 4/115 (3%)
Query: 373 GQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDV---GTMVSPTAFARRSLSYLMSDMP 429
Q+++ + + R + + Y + + + R + + P
Sbjct: 229 KQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSVAEYTVRSKERICHCFSKDEKP 288
Query: 430 QEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKSANA 484
EA+ S+ + P A +A A +EA A N+
Sbjct: 289 VEAIRICSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYEAA-QEHNENDQQI 342
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} Length = 359 | Back alignment and structure |
|---|
Score = 40.7 bits (96), Expect = 6e-04
Identities = 10/115 (8%), Positives = 30/115 (26%), Gaps = 15/115 (13%)
Query: 384 KGDVAFRHKDFRASIECYTQFI--------------DVGTMVSPTAFARRSLSYLMSDMP 429
+G + + + + + + + + ++L
Sbjct: 77 RGHLLLKQGKLDEAEDDFKKVLKSNPSEQEEKEAESQLVKADEMQRLRSQALDAFDGADY 136
Query: 430 QEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKSANA 484
A+ + + L+A G+ +A + L+ A + A
Sbjct: 137 TAAITFLDKILEVCVWDAELRELRAECFIKEGEPRKAISDLKAA-SKLKSDNTEA 190
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 2e-07
Identities = 60/295 (20%), Positives = 97/295 (32%), Gaps = 67/295 (22%)
Query: 73 VYKGKL------ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQL-RNRRLANLLGCCCE 124
V ++AVK A R+ + E + + QL + + NLLG C
Sbjct: 61 VMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTL 120
Query: 125 GDERLLVAEYMPN---------------------DTLAKHLFHWETQPMKWAMRLRVALH 163
L+ EY + + + + + L A
Sbjct: 121 SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQ 180
Query: 164 IAEALEYCTSKERALYH-DLNAYRIVFDDDVNPRLSC----FGLMKNSRD--GRSY---S 213
+A+ +E+ K H DL A R V V FGL +RD S
Sbjct: 181 VAKGMEFLEFKS--CVHRDLAA-RNVL---VTHGKVVKICDFGL---ARDIMSDSNYVVR 231
Query: 214 TNLAF----TPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP------PSHALDLIRDR 263
N PE L G T +S ++S+G LL ++ S P ++ LI++
Sbjct: 232 GNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNG 291
Query: 264 NIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 318
E E+ + C ++ R+RP+ +L + L D E
Sbjct: 292 FKMDQPFYATE---------EIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAE 337
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 52.5 bits (125), Expect = 2e-07
Identities = 55/353 (15%), Positives = 106/353 (30%), Gaps = 101/353 (28%)
Query: 15 SEYGEAAPEAQDVENEEKPGVDNVPVFCEYSI------ETLRTATSGFAMENIVSEHGEK 68
+E + + + + ++ VF +Y++ LR A V G
Sbjct: 100 TEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVL 159
Query: 69 -------APNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGC 121
A +V K++ + + F W + L
Sbjct: 160 GSGKTWVALDVCLSYKVQCKMDFKI--F----WLN----------------------LKN 191
Query: 122 CCEGDERL-----LVAEYMPNDT-LAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE 175
C + L L+ + PN T + H + + + LR + ++ Y E
Sbjct: 192 CNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELR---RLLKSKPY----E 244
Query: 176 RALYHDLNAYRIVFDDDV-NPR------LSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGR 228
L +V + V N + LSC L+ +R + + L+ T
Sbjct: 245 NCL--------LVLLN-VQNAKAWNAFNLSCKILL-TTRF-KQVTDFLSAA-----TTTH 288
Query: 229 VTPESVMYSFG-----TLLLDLLSGK--HIPPS----H--ALDLI--RDRNIQTLTDSCL 273
++ + + +LLL L + +P + L +I R+ D
Sbjct: 289 ISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWD--- 345
Query: 274 EGQFSSDEGTELVRLASRCLQY-EPRERPNPRSLVTALVTLQKDTEVPSHVLM 325
+ +L + L EP E R + L +P+ +L
Sbjct: 346 --NWKHVNCDKLTTIIESSLNVLEPAEY---RKMFDRLSVFPPSAHIPTILLS 393
|
| >4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans} Length = 127 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 4e-07
Identities = 15/104 (14%), Positives = 31/104 (29%), Gaps = 8/104 (7%)
Query: 382 KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQV 441
K G+ A++ KDF + Y + I++ + T + ++ Y E + +A
Sbjct: 12 KDLGNAAYKQKDFEKAHVHYDKAIELDPS-NITFYNNKAAVYFEEKKFAECVQFCEKAVE 70
Query: 442 ISPVWHMA------AYL-QAAALFALGKENEAQAALREASILEN 478
+ A A + A +
Sbjct: 71 VGRETRADYKLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSEFR 114
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 50.5 bits (121), Expect = 6e-07
Identities = 44/244 (18%), Positives = 87/244 (35%), Gaps = 19/244 (7%)
Query: 73 VYKGK-LENQFRIAVKRFNRSAWPDA--RQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129
K E+ + +K N S + E + +++ + E
Sbjct: 40 AILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLY 99
Query: 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF 189
+V +Y L K + + + L + I AL++ + + L+ D+ + I
Sbjct: 100 IVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR-KILHRDIKSQNIFL 158
Query: 190 DDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGTLLLDL 245
D +L FG+ + + TP PE +S +++ G +L +L
Sbjct: 159 TKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYEL 218
Query: 246 LSGKHIPPSHALDLIRDRNIQTLTDSCLEGQF---SSDEGTELVRLASRCLQYEPRERPN 302
+ K A +++ L + G F S +L L S+ + PR+RP+
Sbjct: 219 CTLK--HAFEA------GSMKNLVLKIISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPS 270
Query: 303 PRSL 306
S+
Sbjct: 271 VNSI 274
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434 | Back alignment and structure |
|---|
Score = 50.6 bits (121), Expect = 7e-07
Identities = 53/285 (18%), Positives = 92/285 (32%), Gaps = 82/285 (28%)
Query: 72 VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANL--LGCCCEGDERL 129
VV++G + + +AVKR A E + + + + N+ C D L
Sbjct: 31 VVFQGSFQGR-PVAVKRMLIDFCDIALM---EIKLLTESDDH--PNVIRYYCSETTDRFL 84
Query: 130 -LVAEYMPNDTL-----AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLN 183
+ E N L +K++ + K + + IA + + H L
Sbjct: 85 YIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL--------HSLK 135
Query: 184 --------------------AYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP--- 220
A + +++ +S FGL K G+S P
Sbjct: 136 IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGT 195
Query: 221 -----PEYLR-------TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL 268
PE L R+T ++S G + +LS P R+ NI
Sbjct: 196 SGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD--KYSRESNI--- 250
Query: 269 TDSCLEGQFS------------SDEGTELVRLASRCLQYEPRERP 301
+ G FS E T+L+ + + ++P +RP
Sbjct: 251 ----IRGIFSLDEMKCLHDRSLIAEATDLIS---QMIDHDPLKRP 288
|
| >3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A Length = 537 | Back alignment and structure |
|---|
Score = 50.5 bits (121), Expect = 8e-07
Identities = 23/103 (22%), Positives = 46/103 (44%), Gaps = 1/103 (0%)
Query: 382 KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQV 441
K +G+ F K+F +I+ Y I++ P ++ S Y+ + ++ + ++A
Sbjct: 29 KNRGNHFFTAKNFNEAIKYYQYAIELDPN-EPVFYSNISACYISTGDLEKVIEFTTKALE 87
Query: 442 ISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKSANA 484
I P A +A+A +LG +A L S+ + A+
Sbjct: 88 IKPDHSKALLRRASANESLGNFTDAMFDLSVLSLNGDFDGASI 130
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365 | Back alignment and structure |
|---|
Score = 49.6 bits (118), Expect = 1e-06
Identities = 27/265 (10%), Positives = 62/265 (23%), Gaps = 45/265 (16%)
Query: 72 VVYKGK------LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEG 125
VY+ +N+ + +K + + + +
Sbjct: 80 QVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ 139
Query: 126 DERLLVAEYMPNDTLAKHL-----FHWETQPMKWAMRLRVALHIAEALEYCTSKERA--- 177
+ +LV E TL + + P + A+ + +E E
Sbjct: 140 NGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISF--AMRMLYMIEQVHDCEIIHGD 197
Query: 178 -------LYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEY--- 223
L + D L G S D + + FT +
Sbjct: 198 IKPDNFILGNGFLEQDDEDDLSAGLALIDLGQ---SIDMKLFPKGTIFTAKCETSGFQCV 254
Query: 224 -LRTGRVTPESV-MYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 281
+ + + + + + +L G ++ +++ + + D
Sbjct: 255 EMLSNKPWNYQIDYFGVAATVYCMLFGTYMK-------VKNEGGECKPEGLFRRLPHLDM 307
Query: 282 GTELVRLASRCLQYEPRERPNPRSL 306
E L L
Sbjct: 308 WNEFFH---VMLNIPDCHHLPSLDL 329
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 1e-06
Identities = 47/209 (22%), Positives = 82/209 (39%), Gaps = 34/209 (16%)
Query: 164 IAEALEYCTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST---NLAFT 219
I A++YC K + H DL A ++ D D+N +++ FG G +
Sbjct: 123 IVSAVQYCHQK--RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYA 180
Query: 220 PPEYLRTGR--VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQF 277
PE + G+ PE ++S G +L L+SG +P +N++ L + L G++
Sbjct: 181 APELFQ-GKKYDGPEVDVWSLGVILYTLVSG-SLP-------FDGQNLKELRERVLRGKY 231
Query: 278 S--SDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPSHVLMGIPHGAAALP 335
T+ L R L P +R TL+ ++ + G
Sbjct: 232 RIPFYMSTDCENLLKRFLVLNPIKRG----------TLE---QIMKDRWINA--GHEEDE 276
Query: 336 LSPLGDACLRMDLTAIHEILEKLGYKDDE 364
L P + L + +I+ +GY +E
Sbjct: 277 LKPFVEPELDISDQKRIDIMVGMGYSQEE 305
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 46.8 bits (111), Expect = 7e-06
Identities = 38/197 (19%), Positives = 68/197 (34%), Gaps = 37/197 (18%)
Query: 133 EYMPNDTLAKHLFH-WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDL---NAYRIV 188
+ + L + + + + L + + IAEA+E+ SK ++ DL N I
Sbjct: 141 QLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSK-GLMHRDLKPSN---IF 196
Query: 189 FDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRV-TP---------------E 232
F D ++ FGL+ T L P TG+V T +
Sbjct: 197 FTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHK 256
Query: 233 SVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQF---SSDEGTELVRLA 289
++S G +L +LL ++ +TD +F + + + +
Sbjct: 257 VDIFSLGLILFELLYSF--STQMER-------VRIITDVR-NLKFPLLFTQKYPQEHMMV 306
Query: 290 SRCLQYEPRERPNPRSL 306
L P ERP +
Sbjct: 307 QDMLSPSPTERPEATDI 323
|
| >3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae} Length = 258 | Back alignment and structure |
|---|
Score = 46.0 bits (110), Expect = 9e-06
Identities = 15/103 (14%), Positives = 37/103 (35%), Gaps = 3/103 (2%)
Query: 382 KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQV 441
K +G+ ++ + F +IE Y + ++ T R+ + + A++ + A
Sbjct: 9 KAEGNKFYKARQFDEAIEHYNKAWELHK--DITYLNNRAAAEYEKGEYETAISTLNDAVE 66
Query: 442 ISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKSANA 484
+ + + +G L++ I +KS
Sbjct: 67 QGREMRADYKVISKSFARIGNAYHKLGDLKKT-IEYYQKSLTE 108
|
| >3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae} Length = 258 | Back alignment and structure |
|---|
Score = 42.2 bits (100), Expect = 2e-04
Identities = 21/104 (20%), Positives = 41/104 (39%), Gaps = 8/104 (7%)
Query: 384 KGDVAFRHKDFRASIECYTQFIDVGTMVSPT---AFARRSLSYLMSDMPQEALNDASQAQ 440
+G F D+ +++ YT+ I +P ++ R+ + EA+ D ++A
Sbjct: 145 EGKEYFTKSDWPNAVKAYTEMIKR----APEDARGYSNRAAALAKLMSFPEAIADCNKAI 200
Query: 441 VISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKSANA 484
P + A +A A A+ + A L A + + N
Sbjct: 201 EKDPNFVRAYIRKATAQIAVKEYASALETLDAARTK-DAEVNNG 243
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 1e-05
Identities = 37/164 (22%), Positives = 57/164 (34%), Gaps = 46/164 (28%)
Query: 163 HIAEALEYCTSKERALYHDLN-AYR------IVFDDDVNPRLSCFGLMKNSRDGRSYSTN 215
+ E + H LN +R I+ DDD+N +L+ FG G
Sbjct: 132 ALLEVICAL--------HKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRE- 182
Query: 216 LAFTP----PEYLRTGRV------TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI 265
+ TP PE + E M+S G ++ LL+G PP R
Sbjct: 183 VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG--SPPFW------HRKQ 234
Query: 266 QTLTDSCLEGQFS---------SDEGTELVRLASRCLQYEPRER 300
+ + G + SD +LV R L +P++R
Sbjct: 235 MLMLRMIMSGNYQFGSPEWDDYSDTVKDLVS---RFLVVQPQKR 275
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321 | Back alignment and structure |
|---|
Score = 46.2 bits (110), Expect = 1e-05
Identities = 45/250 (18%), Positives = 92/250 (36%), Gaps = 20/250 (8%)
Query: 66 GEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE 124
GE + +V + + ++AVK + E + ++ + +
Sbjct: 54 GEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLV 113
Query: 125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 184
G+E ++ E++ L + + V + +AL Y ++ ++ D+ +
Sbjct: 114 GEELWVLMEFLQGGALTDIV---SQVRLNEEQIATVCEAVLQALAYLHAQ-GVIHRDIKS 169
Query: 185 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGT 240
I+ D +LS FG +L TP PE + E ++S G
Sbjct: 170 DSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGI 229
Query: 241 LLLDLLSGK----HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYE 296
++++++ G+ P A+ +RD L +S + S L R L +
Sbjct: 230 MVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNS---HKVSP----VLRDFLERMLVRD 282
Query: 297 PRERPNPRSL 306
P+ER + L
Sbjct: 283 PQERATAQEL 292
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 1e-05
Identities = 50/273 (18%), Positives = 90/273 (32%), Gaps = 60/273 (21%)
Query: 73 VYKG--KLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL- 129
V K L++++ A+K+ + L E + L ++ + E +
Sbjct: 22 VVKARNALDSRYY-AIKKIRHTE-EKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVK 79
Query: 130 ------------LVAEYMPNDTLAKHLFHWETQPMKW--AMRLRVALHIAEALEYCTSKE 175
+ EY N TL + ++ + R+ I EAL Y S+
Sbjct: 80 PMTAVKKKSTLFIQMEYCENGTLYDLI---HSENLNQQRDEYWRLFRQILEALSYIHSQG 136
Query: 176 RALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAF--------------TP 220
+ H DL I D+ N ++ FGL KN + T
Sbjct: 137 --IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTA 194
Query: 221 ----PEYLR-TGRVTPESVMYSFGTLLLDLLSGKHIPPSHA------LDLIRDRNIQTLT 269
E L TG + MYS G + +++ P S L +R +I+
Sbjct: 195 MYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY----PFSTGMERVNILKKLRSVSIE--- 247
Query: 270 DSCLEGQFSSDEGTELVRLASRCLQYEPRERPN 302
F ++ ++ + ++P +RP
Sbjct: 248 ---FPPDFDDNKMKVEKKIIRLLIDHDPNKRPG 277
|
| >2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A Length = 142 | Back alignment and structure |
|---|
Score = 44.0 bits (104), Expect = 2e-05
Identities = 12/102 (11%), Positives = 30/102 (29%), Gaps = 1/102 (0%)
Query: 383 KKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVI 442
G ++ + + + + + F + ++AL S ++
Sbjct: 23 ALGFNQYQAGKWDDAQKIFQALCMLDHY-DARYFLGLGACRQSLGLYEQALQSYSYGALM 81
Query: 443 SPVWHMAAYLQAAALFALGKENEAQAALREASILENKKSANA 484
+ A LG + A++ A L + A+
Sbjct: 82 DINEPRFPFHAAECHLQLGDLDGAESGFYSARALAAAQPAHE 123
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 2e-05
Identities = 51/250 (20%), Positives = 100/250 (40%), Gaps = 20/250 (8%)
Query: 66 GEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE 124
G+ A VY + +A+++ N P + E + + +N + N L
Sbjct: 29 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV 88
Query: 125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 184
GDE +V EY+ +L + M V +ALE+ S + ++ D+ +
Sbjct: 89 GDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLHS-NQVIHRDIKS 144
Query: 185 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGT 240
I+ D + +L+ FG +S + + TP PE + P+ ++S G
Sbjct: 145 DNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGI 204
Query: 241 LLLDLLSGK----HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYE 296
+ ++++ G+ + P AL LI L + + S+ +RCL+ +
Sbjct: 205 MAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP---EKLSA----IFRDFLNRCLEMD 257
Query: 297 PRERPNPRSL 306
+R + + L
Sbjct: 258 VEKRGSAKEL 267
|
| >2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1 Length = 198 | Back alignment and structure |
|---|
Score = 44.4 bits (105), Expect = 2e-05
Identities = 24/136 (17%), Positives = 47/136 (34%), Gaps = 19/136 (13%)
Query: 361 KDDEGAATEMWTGQMQETLNS----KKKGDVAFRHKDFRASIECYTQFIDVGTMVSP--- 413
+GA ++ +E + S K++G+ F+ + +I Y + +D
Sbjct: 17 LYFQGAKKSIYDYTDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDD 76
Query: 414 ------------TAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALG 461
+ + Y + +A++ AS+ I A Y A G
Sbjct: 77 QILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFG 136
Query: 462 KENEAQAALREASILE 477
EA+ L +A+ L
Sbjct: 137 FLEEAKENLYKAASLN 152
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286 | Back alignment and structure |
|---|
Score = 45.1 bits (107), Expect = 3e-05
Identities = 47/293 (16%), Positives = 86/293 (29%), Gaps = 57/293 (19%)
Query: 61 IVSEHGEKAPNVVYKGKLENQFR-IAVK--RFNRSAWPDARQ-FLEEARAVGQLRNRRLA 116
++ HG P ++ R +A+ D Q L + ++ +A
Sbjct: 35 LLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVA 94
Query: 117 NLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKER 176
+L L+VAE++ +L + +T P +R +A A + +
Sbjct: 95 RVLDVVHTRAGGLVVAEWIRGGSLQEVA---DTSPSPVGA-IRAMQSLAAAADA--AHRA 148
Query: 177 ALYHDLNAYRIVFDDDVNPRLSCFGLMKN---SRDGRSYSTNLAFTPPEYLRTGRVTPES 233
+ +P S DG A P P+
Sbjct: 149 GVAL-----S-----IDHPS--------RVRVSIDGDVVLAYPATMPD-------ANPQD 183
Query: 234 VMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLE--------GQFSSDEGTEL 285
+ G L LL + P L L + + D ++
Sbjct: 184 DIRGIGASLYALLVNR--WP-----LPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQI 236
Query: 286 VRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPSHVLMGIPHGAAALPLSP 338
+A+R +Q + R T L +Q+ T V + P A + +P
Sbjct: 237 SAVAARSVQGDGGIRSAS----TLLNLMQQATAVADRTEVLGPIDEAPVSAAP 285
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 3e-05
Identities = 56/269 (20%), Positives = 99/269 (36%), Gaps = 45/269 (16%)
Query: 72 VVYKG--KLENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDER 128
VV++ K+++ A+KR AR+ + E +A+ +L + + E +
Sbjct: 20 VVFEAKNKVDDCNY-AIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTT 78
Query: 129 L------------LVAEYMPNDTLAKHLFHWET-QPMKWAMRLRVALHIAEALEYCTSKE 175
+ + + L + T + + ++ L + L IAEA+E+ SK
Sbjct: 79 EKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG 138
Query: 176 RALYH-DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRV-TP-- 231
L H DL I F D ++ FGL+ T L P TG+V T
Sbjct: 139 --LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLY 196
Query: 232 -------------ESVMYSFGTLLLDLLSGKHIPPSHALDLIRD-RNIQTLTDSCLEGQF 277
+ ++S G +L +LL P S ++ +R +++ L L Q
Sbjct: 197 MSPEQIHGNSYSHKVDIFSLGLILFELL----YPFSTQMERVRTLTDVRNLKFPPLFTQK 252
Query: 278 SSDEGTELVRLASRCLQYEPRERPNPRSL 306
+ L P ERP ++
Sbjct: 253 YP----CEYVMVQDMLSPSPMERPEAINI 277
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 4e-05
Identities = 34/181 (18%), Positives = 69/181 (38%), Gaps = 16/181 (8%)
Query: 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF 189
+ E+ TL + + + + + L + I + ++Y SK + + DL I
Sbjct: 97 IQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK-KLINRDLKPSNIFL 155
Query: 190 DDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGTLLLDL 245
D ++ FGL+ + ++ + + T PE + + E +Y+ G +L +L
Sbjct: 156 VDTKQVKIGDFGLVTSLKNDGKRTRSKG-TLRYMSPEQISSQDYGKEVDLYALGLILAEL 214
Query: 246 LSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRS 305
L A + + L D + F + L + L +P +RPN
Sbjct: 215 LH----VCDTAFE--TSKFFTDLRDGIISDIFDK----KEKTLLQKLLSKKPEDRPNTSE 264
Query: 306 L 306
+
Sbjct: 265 I 265
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365 | Back alignment and structure |
|---|
Score = 44.3 bits (105), Expect = 5e-05
Identities = 39/164 (23%), Positives = 59/164 (35%), Gaps = 46/164 (28%)
Query: 163 HIAEALEYCTSKERALYHDLN-AYR------IVFDDDVNPRLSCFGLMKNSRDGRSYSTN 215
+ EA+ + H N +R I+ DD++ RLS FG + G
Sbjct: 208 SLLEAVSFL--------HANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRE- 258
Query: 216 LAFTP----PEYLRTGRV------TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI 265
L TP PE L+ E +++ G +L LL+G PP R
Sbjct: 259 LCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG--SPP------FWHRRQ 310
Query: 266 QTLTDSCLEGQFS---------SDEGTELVRLASRCLQYEPRER 300
+ +EGQ+ S +L+ R LQ +P R
Sbjct: 311 ILMLRMIMEGQYQFSSPEWDDRSSTVKDLIS---RLLQVDPEAR 351
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 6e-05
Identities = 36/161 (22%), Positives = 59/161 (36%), Gaps = 42/161 (26%)
Query: 164 IAEALEYCTSKERALYHDLN-AYR------IVF---DDDVNPRLSCFGLMKNSRDGRSYS 213
I EA+ Y H+ +R +++ D +++ FGL K
Sbjct: 157 ILEAVAYL--------HENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMK 208
Query: 214 TNLAFTP----PEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLT 269
T + TP PE LR PE M+S G + LL G P + +R Q +
Sbjct: 209 T-VCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCG--FEPFYD-----ERGDQFMF 260
Query: 270 DSCLEGQFS---------SDEGTELVRLASRCLQYEPRERP 301
L ++ S +LVR + + +P++R
Sbjct: 261 RRILNCEYYFISPWWDEVSLNAKDLVR---KLIVLDPKKRL 298
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 6e-05
Identities = 37/174 (21%), Positives = 72/174 (41%), Gaps = 23/174 (13%)
Query: 86 VKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLF 145
+KRF R E QL ++ + +++ E D LV EY+ TL++++
Sbjct: 55 LKRFER-----------EVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIE 103
Query: 146 HWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYRIVFDDDVNPRLSCFGLMK 204
P+ + I + +++ + + + H D+ I+ D + ++ FG+ K
Sbjct: 104 --SHGPLSVDTAINFTNQILDGIKH--AHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAK 159
Query: 205 NSRDGRSYSTNLAF-TP----PEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPP 253
+ TN T PE + + +YS G +L ++L G+ PP
Sbjct: 160 ALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGE--PP 211
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 7e-05
Identities = 45/190 (23%), Positives = 71/190 (37%), Gaps = 21/190 (11%)
Query: 130 LVAEYMPNDTLAKHL--FHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH----DLN 183
+V EY LA + E Q + LRV + AL+ C + + DL
Sbjct: 84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLK 143
Query: 184 AYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFG 239
+ D N +L FGL + S++ TP PE + +S ++S G
Sbjct: 144 PANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLG 203
Query: 240 TLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQF---SSDEGTELVRLASRCLQYE 296
LL +L + PP A + + L EG+F EL + +R L +
Sbjct: 204 CLLYELCALM--PPFTA------FSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLK 255
Query: 297 PRERPNPRSL 306
RP+ +
Sbjct: 256 DYHRPSVEEI 265
|
| >3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A Length = 151 | Back alignment and structure |
|---|
Score = 41.7 bits (98), Expect = 8e-05
Identities = 10/130 (7%), Positives = 34/130 (26%), Gaps = 2/130 (1%)
Query: 345 RMDLTAIHEILEKLGYKDDEGAATEMWTGQMQETLNS-KKKGDVAFRHKDFRASIECYTQ 403
+++T I + + GA + + ++ + + +
Sbjct: 2 SLNITENESISTAVIDAINSGATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRF 61
Query: 404 FIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKE 463
+ + Y + + Q+A + + A + + + L
Sbjct: 62 LCIYDFY-NVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLRLKAP 120
Query: 464 NEAQAALREA 473
+A+
Sbjct: 121 LKAKECFELV 130
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 9e-05
Identities = 42/259 (16%), Positives = 78/259 (30%), Gaps = 39/259 (15%)
Query: 73 VYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE----GDE 127
V + L + A+KR D + EA + + L+ C E
Sbjct: 45 VDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHE 104
Query: 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMR--LRVALHIAEALEYCTSKERALYH-DLNA 184
L+ + TL + + + L + L I LE +K H DL
Sbjct: 105 AWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK--GYAHRDLKP 162
Query: 185 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTG----------------R 228
I+ D+ P L G M + S +
Sbjct: 163 TNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCV 222
Query: 229 VTPESVMYSFGTLLLDLLSGKH-----IPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283
+ + ++S G +L ++ G+ ++ L + + SS
Sbjct: 223 IDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSP----RHSSA--- 275
Query: 284 ELVRLASRCLQYEPRERPN 302
L +L + + +P +RP+
Sbjct: 276 -LWQLLNSMMTVDPHQRPH 293
|
| >3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans} Length = 162 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 1e-04
Identities = 22/113 (19%), Positives = 39/113 (34%), Gaps = 17/113 (15%)
Query: 382 KKKGDVAFRHKDFRASIECYTQFIDVGTMVSP-----------------TAFARRSLSYL 424
++KG+ F KD++ +I+ Y + + +A S YL
Sbjct: 15 RQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYL 74
Query: 425 MSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILE 477
EA +S+ A + +A A A K +EA+ L+
Sbjct: 75 NIGDLHEAEETSSEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNH 127
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 1e-04
Identities = 48/273 (17%), Positives = 104/273 (38%), Gaps = 33/273 (12%)
Query: 73 VYKGK-LENQFRIAVKRFNRSAWPDAR---QFLEEARAVGQLRNRRLANLLGCCCEGDER 128
VY+ L + +A+K+ DA+ ++E + QL + + E +E
Sbjct: 48 VYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNEL 107
Query: 129 LLVAEYMPNDTLAKHL--FHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR 186
+V E L++ + F + + + + + + ALE+ S+ R ++ D+
Sbjct: 108 NIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR-RVMHRDIKPAN 166
Query: 187 IVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGTLL 242
+ +L GL + + + +L TP PE + +S ++S G LL
Sbjct: 167 VFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLL 226
Query: 243 LDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFS-------SDEGTELVRLASRCLQY 295
++ + + P + N+ +L + + S+E +LV + C+
Sbjct: 227 YEMAALQ--SPFYG----DKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLV---NMCINP 277
Query: 296 EPRERPNPRSL------VTALVTLQKDTEVPSH 322
+P +RP+ + + A + H
Sbjct: 278 DPEKRPDVTYVYDVAKRMHACTASSLEHHHHHH 310
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 2e-04
Identities = 45/241 (18%), Positives = 80/241 (33%), Gaps = 28/241 (11%)
Query: 73 VYKG-KLENQFRIAVKRFNRSAWP--DARQFLEEARAVGQL-RNRRLANLLGCCCEGDER 128
V+K E+ AVKR D + L E + ++ ++ L EG
Sbjct: 73 VFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGIL 132
Query: 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIV 188
L E L +H W + A AL + S+ ++ D+ I
Sbjct: 133 YLQTELCGPS-LQQHCEAWG-ASLPEAQVWGYLRDTLLALAHLHSQ-GLVHLDVKPANIF 189
Query: 189 FDDDVNPRLSCFGLMK--------NSRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGT 240
+L FGL+ ++G + PE L+ + ++S G
Sbjct: 190 LGPRGRCKLGDFGLLVELGTAGAGEVQEGDPR-----YMAPELLQGSY-GTAADVFSLGL 243
Query: 241 LLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
+L++ P Q L L +F++ +EL + L+ +P+ R
Sbjct: 244 TILEVACNME-LPHGG------EGWQQLRQGYLPPEFTAGLSSELRSVLVMMLEPDPKLR 296
Query: 301 P 301
Sbjct: 297 A 297
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285 | Back alignment and structure |
|---|
Score = 42.2 bits (100), Expect = 2e-04
Identities = 25/161 (15%), Positives = 55/161 (34%), Gaps = 43/161 (26%)
Query: 163 HIAEALEYCTSKERALYHDLN-AYR------IVF---DDDVNPRLSCFGLMKNSRDGRSY 212
+ AL Y H + ++ I+F ++ FGL + +
Sbjct: 132 QMMNALAYF--------HSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHS 183
Query: 213 STNLAFTP----PEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL 268
+ T PE + VT + ++S G ++ LL+G P +++ +
Sbjct: 184 TNAAG-TALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGC--LPFT------GTSLEEV 233
Query: 269 TDSCLEGQFS--------SDEGTELVRLASRCLQYEPRERP 301
+ + + + +L++ + L +P RP
Sbjct: 234 QQKATYKEPNYAVECRPLTPQAVDLLK---QMLTKDPERRP 271
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 3e-04
Identities = 43/254 (16%), Positives = 90/254 (35%), Gaps = 35/254 (13%)
Query: 72 VVYKGKLENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLR--NRRLANLLGCCCEGDE 127
V++ E + A+K N + E + +L+ + ++ L D+
Sbjct: 43 KVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE-ITDQ 101
Query: 128 RL-LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAY 185
+ +V E D L L ++ ++ EA+ + H DL
Sbjct: 102 YIYMVMECGNID-LNSWLKKKKSIDPWERKS--YWKNMLEAVHTIHQHG--IVHSDLKPA 156
Query: 186 RIVFDDDVNPRLSCFGLMKNSRDGRS--YSTNLAFTP----PEYLR-----------TGR 228
+ D +L FG+ + + + T PE ++ +
Sbjct: 157 NFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSK 215
Query: 229 VTPESVMYSFGTLLLDLLSGKHIPP-SHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287
++P+S ++S G +L + GK P ++ I + + D E +F +L
Sbjct: 216 ISPKSDVWSLGCILYYMTYGK--TPFQQIINQIS--KLHAIIDPNHEIEFPDIPEKDLQD 271
Query: 288 LASRCLQYEPRERP 301
+ CL+ +P++R
Sbjct: 272 VLKCCLKRDPKQRI 285
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 4e-04
Identities = 48/246 (19%), Positives = 84/246 (34%), Gaps = 34/246 (13%)
Query: 73 VYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
V++ K + F+ AVK+ R EE A L + R+ L G EG +
Sbjct: 74 VHRMKDKQTGFQCAVKKVRL---EVFRV--EELVACAGLSSPRIVPLYGAVREGPWVNIF 128
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
E + +L + + + L E LEY ++ R L+ D+ A ++
Sbjct: 129 MELLEGGSLGQLIKQMG--CLPEDRALYYLGQALEGLEYLHTR-RILHGDVKADNVLLSS 185
Query: 192 D-VNPRLSCFGLMKNSRDGRSYSTNLAF-----TP----PEYLRTGRVTPESVMYSFGTL 241
D L FG + + L T PE + + ++S +
Sbjct: 186 DGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCM 245
Query: 242 LLDLLSGKH----IPPSHALDLIRDRN--IQTLTDSCLEGQFSSDEGTELVRLASRCLQY 295
+L +L+G H I I+ + SC + + ++ L+
Sbjct: 246 MLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSC------APLTAQAIQ---EGLRK 296
Query: 296 EPRERP 301
EP R
Sbjct: 297 EPVHRA 302
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 41.4 bits (98), Expect = 4e-04
Identities = 53/247 (21%), Positives = 93/247 (37%), Gaps = 41/247 (16%)
Query: 73 VYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRN-----RRLA--NLLG--CC 122
VY + +++F +A+K ++ LE+A QLR L N+L
Sbjct: 25 VYLAREKQSKFILALKVLFKAQ-------LEKAGVEHQLRREVEIQSHLRHPNILRLYGY 77
Query: 123 CEGDERL-LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH- 180
R+ L+ EY P T+ + L + +A AL YC SK + H
Sbjct: 78 FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY--ITELANALSYCHSKR--VIHR 133
Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST--NLAFTPPEYLRTGRVTPESVMYSF 238
D+ ++ +++ FG ++ R L + PPE + + ++S
Sbjct: 134 DIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSL 193
Query: 239 GTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFS-----SDEGTELVRLASRCL 293
G L + L GK PP Q +F+ ++ +L+ SR L
Sbjct: 194 GVLCYEFLVGK--PP------FEANTYQETYKRISRVEFTFPDFVTEGARDLI---SRLL 242
Query: 294 QYEPRER 300
++ P +R
Sbjct: 243 KHNPSQR 249
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576 | Back alignment and structure |
|---|
Score = 41.3 bits (97), Expect = 5e-04
Identities = 45/200 (22%), Positives = 72/200 (36%), Gaps = 35/200 (17%)
Query: 119 LGCCCEGDERL-LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAE---ALEYCTSK 174
L E + L LV M L H++H A R + AE LE +
Sbjct: 249 LAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEA---RAVFYAAEICCGLEDLHRE 305
Query: 175 ERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAF--TPPEYLRTGRVTPE 232
R +Y DL I+ DD + R+S GL + +G++ T Y+ PE
Sbjct: 306 -RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKG---RVGT-VGYM-----APE 355
Query: 233 SVMY----------SFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQ--FSSD 280
V + G LL ++++G+ P + + + E +S
Sbjct: 356 VVKNERYTFSPDWWALGCLLYEMIAGQ--SPFQQRK--KKIKREEVERLVKEVPEEYSER 411
Query: 281 EGTELVRLASRCLQYEPRER 300
+ L S+ L +P ER
Sbjct: 412 FSPQARSLCSQLLCKDPAER 431
|
| >3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695 | Back alignment and structure |
|---|
Score = 41.4 bits (97), Expect = 6e-04
Identities = 38/193 (19%), Positives = 64/193 (33%), Gaps = 24/193 (12%)
Query: 119 LGCCCEGDERL-LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAE---ALEYCTSK 174
+ ++L + + M L HL + + AE LE+ ++
Sbjct: 257 MSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA-----DMRFYAAEIILGLEHMHNR 311
Query: 175 ERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVT 230
+Y DL I+ D+ + R+S GL + + ++ T PE L+ G
Sbjct: 312 -FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA--SVGTHGYMAPEVLQKGVAY 368
Query: 231 PESVMY-SFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQ--FSSDEGTELVR 287
S + S G +L LL G P ++ + L EL
Sbjct: 369 DSSADWFSLGCMLFKLLRGH--SPFRQHK---TKDKHEIDRMTLTMAVELPDSFSPELRS 423
Query: 288 LASRCLQYEPRER 300
L LQ + R
Sbjct: 424 LLEGLLQRDVNRR 436
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446 | Back alignment and structure |
|---|
Score = 41.3 bits (97), Expect = 6e-04
Identities = 50/198 (25%), Positives = 82/198 (41%), Gaps = 35/198 (17%)
Query: 119 LGCCCEGDERL-LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERA 177
L + +RL V EY L HL E + R A I AL+Y S++
Sbjct: 213 LKYSFQTHDRLCFVMEYANGGELFFHL-SRERVFSEDRARFYGA-EIVSALDYLHSEKNV 270
Query: 178 LYHDLNAYRIVFDDDVNPRLSCFGLMK-NSRDGRSYSTNLAF--TPPEYLRTGRVTPESV 234
+Y DL ++ D D + +++ FGL K +DG + T F T PEYL PE +
Sbjct: 271 VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT---FCGT-PEYL-----APEVL 321
Query: 235 MY----------SFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEG--QFSSDEG 282
G ++ +++ G+ P +++ + L + L +F G
Sbjct: 322 EDNDYGRAVDWWGLGVVMYEMMCGR--LP------FYNQDHEKLFELILMEEIRFPRTLG 373
Query: 283 TELVRLASRCLQYEPRER 300
E L S L+ +P++R
Sbjct: 374 PEAKSLLSGLLKKDPKQR 391
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573 | Back alignment and structure |
|---|
Score = 41.4 bits (97), Expect = 6e-04
Identities = 45/242 (18%), Positives = 78/242 (32%), Gaps = 51/242 (21%)
Query: 85 AVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPN----DTL 140
A K D +E + + LR+ L NL + +E +++ E+M + +
Sbjct: 186 AAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKV 245
Query: 141 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLN-AYR------IVFDDDV 193
A MR + + L + H+ N + I+F
Sbjct: 246 ADEHNKMSEDEAVEYMR-----QVCKGLCHM--------HENNYVHLDLKPENIMFTTKR 292
Query: 194 NPRLSC--FGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGTLLLDLLS 247
+ L FGL + +S T PE V + M+S G L LLS
Sbjct: 293 SNELKLIDFGLTAHLDPKQSVKVTTG-TAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLS 351
Query: 248 GKHIPPSHALDLIRDRNIQTLTDSCLEGQFS---------SDEGTELVRLASRCLQYEPR 298
G + P N + ++ S++G + +R + L +P
Sbjct: 352 G--LSP------FGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIR---KLLLADPN 400
Query: 299 ER 300
R
Sbjct: 401 TR 402
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486 | Back alignment and structure |
|---|
Score = 40.8 bits (96), Expect = 7e-04
Identities = 34/166 (20%), Positives = 59/166 (35%), Gaps = 44/166 (26%)
Query: 159 RVALHIAEALEYCTSKERALYHDLN-AYR------IVF---DDDVNPRLSCFGLMKNSRD 208
R+ + + Y H N +R I+ + D + ++ FGL +
Sbjct: 125 RIIKQVFSGITYM--------HKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176
Query: 209 GRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN 264
T PE LR G + ++S G +L LLSG PP + +N
Sbjct: 177 NTKMKD-RIGTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSGT--PPFYG------KN 226
Query: 265 IQTLTDSCLEGQFS---------SDEGTELVRLASRCLQYEPRERP 301
+ G+++ SD+ +L+R + L + P R
Sbjct: 227 EYDILKRVETGKYAFDLPQWRTISDDAKDLIR---KMLTFHPSLRI 269
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390 | Back alignment and structure |
|---|
Score = 40.6 bits (95), Expect = 8e-04
Identities = 41/253 (16%), Positives = 86/253 (33%), Gaps = 33/253 (13%)
Query: 72 VVYKGKLENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLR--NRRLANLLGCCCEGDE 127
V++ E + A+K N + E + +L+ + ++ L
Sbjct: 71 KVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY 130
Query: 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLNAYR 186
+V E D L L ++ ++ EA+ + H DL
Sbjct: 131 IYMVMECGNID-LNSWLKKKKSIDPWERKS--YWKNMLEAVHTIHQHG--IVHSDLKPAN 185
Query: 187 IVFDDDVNPRLSCFGLMKNSRDGRS--YSTNLAFTP----PEYLR-----------TGRV 229
+ D +L FG+ + + + PE ++ ++
Sbjct: 186 FLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKI 244
Query: 230 TPESVMYSFGTLLLDLLSGKHIPP-SHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288
+P+S ++S G +L + GK P ++ I + + D E +F +L +
Sbjct: 245 SPKSDVWSLGCILYYMTYGK--TPFQQIINQIS--KLHAIIDPNHEIEFPDIPEKDLQDV 300
Query: 289 ASRCLQYEPRERP 301
CL+ +P++R
Sbjct: 301 LKCCLKRDPKQRI 313
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 484 | |||
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 100.0 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 100.0 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 100.0 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 100.0 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 100.0 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 100.0 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 100.0 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 100.0 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 100.0 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 100.0 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 100.0 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 100.0 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 100.0 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 100.0 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 100.0 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 100.0 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 100.0 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 100.0 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 100.0 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 100.0 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 100.0 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 100.0 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 100.0 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 100.0 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 100.0 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 100.0 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 100.0 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 100.0 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 100.0 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 100.0 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 100.0 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 100.0 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 100.0 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 100.0 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 100.0 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 100.0 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 100.0 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 100.0 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 100.0 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 100.0 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 100.0 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 100.0 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 100.0 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 100.0 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 100.0 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 100.0 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 100.0 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 100.0 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 100.0 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 100.0 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 100.0 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 100.0 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 100.0 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 100.0 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 100.0 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 100.0 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 100.0 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 100.0 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 100.0 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 100.0 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 100.0 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 100.0 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 100.0 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 100.0 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 100.0 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 100.0 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 100.0 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 100.0 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 100.0 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 100.0 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 100.0 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 100.0 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 100.0 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 100.0 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 100.0 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 100.0 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 100.0 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 100.0 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 100.0 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 100.0 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 100.0 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 100.0 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 100.0 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 100.0 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 100.0 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 100.0 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 100.0 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 100.0 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 100.0 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 100.0 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 100.0 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 100.0 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 100.0 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 100.0 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 100.0 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 100.0 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 100.0 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 100.0 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 100.0 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 100.0 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 100.0 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 100.0 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 100.0 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 100.0 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 100.0 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 100.0 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 100.0 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 100.0 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 100.0 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 100.0 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 100.0 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 100.0 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 100.0 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 100.0 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 100.0 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 100.0 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 100.0 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 100.0 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 100.0 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 100.0 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 100.0 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 100.0 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 100.0 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 100.0 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 100.0 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 100.0 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 100.0 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 100.0 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 100.0 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 100.0 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 100.0 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 100.0 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 100.0 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 100.0 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 100.0 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 100.0 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 100.0 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 100.0 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 100.0 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 100.0 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 100.0 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 100.0 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 100.0 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 100.0 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 100.0 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 100.0 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 100.0 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 100.0 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 100.0 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 100.0 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 100.0 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 100.0 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 100.0 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 100.0 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 100.0 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 100.0 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 100.0 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 100.0 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 100.0 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 100.0 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 100.0 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 100.0 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 100.0 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 100.0 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 100.0 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 100.0 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 100.0 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 100.0 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 100.0 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 100.0 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 100.0 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 100.0 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 100.0 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 100.0 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 100.0 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 100.0 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 100.0 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 100.0 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 100.0 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 100.0 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 100.0 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 100.0 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 100.0 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 100.0 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 100.0 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 100.0 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 100.0 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 100.0 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 100.0 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 100.0 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 100.0 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 100.0 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 100.0 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 100.0 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 100.0 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 100.0 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 100.0 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 100.0 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 100.0 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 100.0 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 100.0 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 100.0 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 100.0 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 100.0 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 100.0 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 100.0 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 100.0 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 100.0 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 100.0 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 100.0 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 100.0 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 100.0 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 100.0 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 100.0 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 100.0 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 100.0 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 100.0 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 100.0 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 100.0 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 100.0 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 100.0 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 100.0 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.95 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.93 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.86 | |
| 4gco_A | 126 | Protein STI-1; structural genomics, PSI-biology, m | 99.84 | |
| 2hr2_A | 159 | Hypothetical protein; alpha-alpha superhelix fold, | 99.81 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 99.79 | |
| 3gyz_A | 151 | Chaperone protein IPGC; asymmetric homodimer, tetr | 99.78 | |
| 4gcn_A | 127 | Protein STI-1; structural genomics, PSI-biology, m | 99.76 | |
| 3rkv_A | 162 | Putative peptidylprolyl isomerase; structural geno | 99.74 | |
| 3upv_A | 126 | Heat shock protein STI1; TPR-fold, adaptor protein | 99.72 | |
| 2vgx_A | 148 | Chaperone SYCD; alternative dimer assembly, tetrat | 99.7 | |
| 3sz7_A | 164 | HSC70 cochaperone (SGT); TPR domain, GET4, GET5, G | 99.69 | |
| 2xcb_A | 142 | PCRH, regulatory protein PCRH; protein transport, | 99.68 | |
| 4ga2_A | 150 | E3 SUMO-protein ligase ranbp2; TPR motif, nuclear | 99.68 | |
| 1hxi_A | 121 | PEX5, peroxisome targeting signal 1 receptor PEX5; | 99.66 | |
| 3q49_B | 137 | STIP1 homology and U box-containing protein 1; E3 | 99.61 | |
| 1zu2_A | 158 | Mitochondrial import receptor subunit TOM20-3; TPR | 99.59 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 99.59 | |
| 3urz_A | 208 | Uncharacterized protein; tetratricopeptide repeats | 99.58 | |
| 1kt0_A | 457 | FKBP51, 51 kDa FK506-binding protein; FKBP-like pp | 99.58 | |
| 1p5q_A | 336 | FKBP52, FK506-binding protein 4; isomerase; 2.80A | 99.58 | |
| 2fbn_A | 198 | 70 kDa peptidylprolyl isomerase, putative; sulfur | 99.58 | |
| 4gyw_A | 723 | UDP-N-acetylglucosamine--peptide N- acetylglucosam | 99.58 | |
| 2h6f_A | 382 | Protein farnesyltransferase/geranylgeranyltransfer | 99.57 | |
| 1elw_A | 118 | TPR1-domain of HOP; HOP, TPR-domain, peptide-compl | 99.56 | |
| 2c2l_A | 281 | CHIP, carboxy terminus of HSP70-interacting protei | 99.56 | |
| 2h6f_A | 382 | Protein farnesyltransferase/geranylgeranyltransfer | 99.56 | |
| 3vtx_A | 184 | MAMA; tetratricopeptide repeats (TPR) containing p | 99.56 | |
| 3urz_A | 208 | Uncharacterized protein; tetratricopeptide repeats | 99.56 | |
| 2lni_A | 133 | Stress-induced-phosphoprotein 1; structural genomi | 99.55 | |
| 2pl2_A | 217 | Hypothetical conserved protein TTC0263; TPR, prote | 99.55 | |
| 4ga2_A | 150 | E3 SUMO-protein ligase ranbp2; TPR motif, nuclear | 99.55 | |
| 2dba_A | 148 | Smooth muscle cell associated protein-1, isoform 2 | 99.53 | |
| 2kck_A | 112 | TPR repeat; tetratricopeptide repeat, structural g | 99.53 | |
| 1ihg_A | 370 | Cyclophilin 40; ppiase immunophilin tetratricopept | 99.53 | |
| 1a17_A | 166 | Serine/threonine protein phosphatase 5; hydrolase, | 99.53 | |
| 2xev_A | 129 | YBGF; tetratricopeptide, alpha-helical, metal bind | 99.53 | |
| 2pl2_A | 217 | Hypothetical conserved protein TTC0263; TPR, prote | 99.52 | |
| 2if4_A | 338 | ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, | 99.52 | |
| 2vyi_A | 131 | SGTA protein; chaperone, TPR repeat, phosphoprotei | 99.52 | |
| 4i17_A | 228 | Hypothetical protein; TPR repeats protein, structu | 99.51 | |
| 3k9i_A | 117 | BH0479 protein; putative protein binding protein, | 99.5 | |
| 1elr_A | 131 | TPR2A-domain of HOP; HOP, TPR-domain, peptide-comp | 99.47 | |
| 2e2e_A | 177 | Formate-dependent nitrite reductase complex NRFG; | 99.47 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.46 | |
| 4i17_A | 228 | Hypothetical protein; TPR repeats protein, structu | 99.45 | |
| 3vtx_A | 184 | MAMA; tetratricopeptide repeats (TPR) containing p | 99.45 | |
| 2l6j_A | 111 | TPR repeat-containing protein associated with HSP; | 99.45 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 99.45 | |
| 1hh8_A | 213 | P67PHOX, NCF-2, neutrophil cytosol factor 2; cell | 99.43 | |
| 1na0_A | 125 | Designed protein CTPR3; de novo protein; HET: IPT; | 99.43 | |
| 3gyz_A | 151 | Chaperone protein IPGC; asymmetric homodimer, tetr | 99.39 | |
| 2kat_A | 115 | Uncharacterized protein; NESG, structure, structur | 99.39 | |
| 4gco_A | 126 | Protein STI-1; structural genomics, PSI-biology, m | 99.38 | |
| 1xnf_A | 275 | Lipoprotein NLPI; TPR, tetratricopeptide, structur | 99.38 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 99.38 | |
| 3uq3_A | 258 | Heat shock protein STI1; HSP90, peptide binding, c | 99.37 | |
| 1hh8_A | 213 | P67PHOX, NCF-2, neutrophil cytosol factor 2; cell | 99.37 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.34 | |
| 2fo7_A | 136 | Synthetic consensus TPR protein; tetratricopeptide | 99.33 | |
| 3qky_A | 261 | Outer membrane assembly lipoprotein YFIO; membrane | 99.33 | |
| 2q7f_A | 243 | YRRB protein; TPR, protein binding; 2.49A {Bacillu | 99.33 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.32 | |
| 4eqf_A | 365 | PEX5-related protein; accessory protein, tetratric | 99.31 | |
| 3as5_A | 186 | MAMA; tetratricopeptide repeats (TPR) containing p | 99.3 | |
| 2kc7_A | 99 | BFR218_protein; tetratricopeptide repeat, all-alph | 99.3 | |
| 4eqf_A | 365 | PEX5-related protein; accessory protein, tetratric | 99.3 | |
| 2fo7_A | 136 | Synthetic consensus TPR protein; tetratricopeptide | 99.29 | |
| 2yhc_A | 225 | BAMD, UPF0169 lipoprotein YFIO; essential BAM comp | 99.29 | |
| 2r5s_A | 176 | Uncharacterized protein VP0806; APC090868.1, vibri | 99.29 | |
| 4abn_A | 474 | Tetratricopeptide repeat protein 5; P53 cofactor, | 99.29 | |
| 3as5_A | 186 | MAMA; tetratricopeptide repeats (TPR) containing p | 99.28 | |
| 3ma5_A | 100 | Tetratricopeptide repeat domain protein; NESG, str | 99.28 | |
| 3ieg_A | 359 | DNAJ homolog subfamily C member 3; TPR motif, chap | 99.27 | |
| 3qou_A | 287 | Protein YBBN; thioredoxin-like fold, tetratricopep | 99.27 | |
| 2ho1_A | 252 | Type 4 fimbrial biogenesis protein PILF; type IV p | 99.27 | |
| 3qky_A | 261 | Outer membrane assembly lipoprotein YFIO; membrane | 99.27 | |
| 2vgx_A | 148 | Chaperone SYCD; alternative dimer assembly, tetrat | 99.27 | |
| 1na3_A | 91 | Designed protein CTPR2; de novo protein; HET: IPT; | 99.26 | |
| 2gw1_A | 514 | Mitochondrial precursor proteins import receptor; | 99.26 | |
| 1fch_A | 368 | Peroxisomal targeting signal 1 receptor; protein-p | 99.25 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 99.25 | |
| 2y4t_A | 450 | DNAJ homolog subfamily C member 3; chaperone, endo | 99.25 | |
| 2q7f_A | 243 | YRRB protein; TPR, protein binding; 2.49A {Bacillu | 99.25 | |
| 1p5q_A | 336 | FKBP52, FK506-binding protein 4; isomerase; 2.80A | 99.24 | |
| 4abn_A | 474 | Tetratricopeptide repeat protein 5; P53 cofactor, | 99.24 | |
| 1w3b_A | 388 | UDP-N-acetylglucosamine--peptide N-acetylglucosami | 99.24 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 99.24 | |
| 1fch_A | 368 | Peroxisomal targeting signal 1 receptor; protein-p | 99.24 | |
| 3uq3_A | 258 | Heat shock protein STI1; HSP90, peptide binding, c | 99.23 | |
| 1w3b_A | 388 | UDP-N-acetylglucosamine--peptide N-acetylglucosami | 99.23 | |
| 3mkr_A | 291 | Coatomer subunit epsilon; tetratricopeptide repeat | 99.23 | |
| 3fp2_A | 537 | TPR repeat-containing protein YHR117W; TOM71, mito | 99.23 | |
| 3hym_B | 330 | Cell division cycle protein 16 homolog; APC, anaph | 99.23 | |
| 2lni_A | 133 | Stress-induced-phosphoprotein 1; structural genomi | 99.22 | |
| 2e2e_A | 177 | Formate-dependent nitrite reductase complex NRFG; | 99.22 | |
| 1a17_A | 166 | Serine/threonine protein phosphatase 5; hydrolase, | 99.22 | |
| 3u4t_A | 272 | TPR repeat-containing protein; structural genomics | 99.21 | |
| 3u4t_A | 272 | TPR repeat-containing protein; structural genomics | 99.21 | |
| 2vq2_A | 225 | PILW, putative fimbrial biogenesis and twitching m | 99.2 | |
| 3dra_A | 306 | Protein farnesyltransferase/geranylgeranyltransfer | 99.2 | |
| 2vq2_A | 225 | PILW, putative fimbrial biogenesis and twitching m | 99.19 | |
| 3cv0_A | 327 | Peroxisome targeting signal 1 receptor PEX5; TPR m | 99.18 | |
| 1qqe_A | 292 | Vesicular transport protein SEC17; helix-turn-heli | 99.18 | |
| 3cv0_A | 327 | Peroxisome targeting signal 1 receptor PEX5; TPR m | 99.18 | |
| 1xnf_A | 275 | Lipoprotein NLPI; TPR, tetratricopeptide, structur | 99.18 | |
| 4gcn_A | 127 | Protein STI-1; structural genomics, PSI-biology, m | 99.17 | |
| 2ho1_A | 252 | Type 4 fimbrial biogenesis protein PILF; type IV p | 99.17 | |
| 3ieg_A | 359 | DNAJ homolog subfamily C member 3; TPR motif, chap | 99.17 | |
| 3hym_B | 330 | Cell division cycle protein 16 homolog; APC, anaph | 99.16 | |
| 2xcb_A | 142 | PCRH, regulatory protein PCRH; protein transport, | 99.16 | |
| 2yhc_A | 225 | BAMD, UPF0169 lipoprotein YFIO; essential BAM comp | 99.16 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 99.15 | |
| 1qqe_A | 292 | Vesicular transport protein SEC17; helix-turn-heli | 99.14 | |
| 2r5s_A | 176 | Uncharacterized protein VP0806; APC090868.1, vibri | 99.14 | |
| 3sz7_A | 164 | HSC70 cochaperone (SGT); TPR domain, GET4, GET5, G | 99.13 | |
| 2y4t_A | 450 | DNAJ homolog subfamily C member 3; chaperone, endo | 99.12 | |
| 3mkr_A | 291 | Coatomer subunit epsilon; tetratricopeptide repeat | 99.12 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 99.11 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.11 | |
| 1kt0_A | 457 | FKBP51, 51 kDa FK506-binding protein; FKBP-like pp | 99.1 | |
| 3k9i_A | 117 | BH0479 protein; putative protein binding protein, | 99.09 | |
| 3rkv_A | 162 | Putative peptidylprolyl isomerase; structural geno | 99.08 | |
| 3upv_A | 126 | Heat shock protein STI1; TPR-fold, adaptor protein | 99.08 | |
| 2if4_A | 338 | ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, | 99.08 | |
| 2vyi_A | 131 | SGTA protein; chaperone, TPR repeat, phosphoprotei | 99.07 | |
| 3fp2_A | 537 | TPR repeat-containing protein YHR117W; TOM71, mito | 99.07 | |
| 1zu2_A | 158 | Mitochondrial import receptor subunit TOM20-3; TPR | 99.07 | |
| 2fbn_A | 198 | 70 kDa peptidylprolyl isomerase, putative; sulfur | 99.06 | |
| 3q7a_A | 349 | Farnesyltransferase alpha subunit; protein prenylt | 99.05 | |
| 1ihg_A | 370 | Cyclophilin 40; ppiase immunophilin tetratricopept | 99.05 | |
| 2xpi_A | 597 | Anaphase-promoting complex subunit CUT9; cell cycl | 99.04 | |
| 3qou_A | 287 | Protein YBBN; thioredoxin-like fold, tetratricopep | 99.04 | |
| 2l6j_A | 111 | TPR repeat-containing protein associated with HSP; | 99.03 | |
| 2xpi_A | 597 | Anaphase-promoting complex subunit CUT9; cell cycl | 99.03 | |
| 4g1t_A | 472 | Interferon-induced protein with tetratricopeptide | 99.02 | |
| 2ond_A | 308 | Cleavage stimulation factor 77 kDa subunit; HAT do | 99.02 | |
| 2hr2_A | 159 | Hypothetical protein; alpha-alpha superhelix fold, | 99.02 | |
| 3edt_B | 283 | KLC 2, kinesin light chain 2; superhelical, struct | 99.01 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.01 | |
| 3u3w_A | 293 | Transcriptional activator PLCR protein; ternary co | 99.0 | |
| 1na3_A | 91 | Designed protein CTPR2; de novo protein; HET: IPT; | 99.0 | |
| 2gw1_A | 514 | Mitochondrial precursor proteins import receptor; | 98.99 | |
| 3edt_B | 283 | KLC 2, kinesin light chain 2; superhelical, struct | 98.98 | |
| 3ma5_A | 100 | Tetratricopeptide repeat domain protein; NESG, str | 98.97 | |
| 2qfc_A | 293 | PLCR protein; TPR, HTH, transcription regulation; | 98.97 | |
| 2c2l_A | 281 | CHIP, carboxy terminus of HSP70-interacting protei | 98.96 | |
| 3nf1_A | 311 | KLC 1, kinesin light chain 1; TPR, structural geno | 98.96 | |
| 3dss_A | 331 | Geranylgeranyl transferase type-2 subunit alpha; p | 98.95 | |
| 2ond_A | 308 | Cleavage stimulation factor 77 kDa subunit; HAT do | 98.95 | |
| 2ifu_A | 307 | Gamma-SNAP; membrane fusion, snare complex disasse | 98.95 | |
| 3ro3_A | 164 | PINS homolog, G-protein-signaling modulator 2; asy | 98.94 | |
| 1ouv_A | 273 | Conserved hypothetical secreted protein; TPR repea | 98.94 | |
| 4f3v_A | 282 | ESX-1 secretion system protein ECCA1; tetratricope | 98.94 | |
| 3dra_A | 306 | Protein farnesyltransferase/geranylgeranyltransfer | 98.93 | |
| 1hxi_A | 121 | PEX5, peroxisome targeting signal 1 receptor PEX5; | 98.93 | |
| 2qfc_A | 293 | PLCR protein; TPR, HTH, transcription regulation; | 98.93 | |
| 1na0_A | 125 | Designed protein CTPR3; de novo protein; HET: IPT; | 98.92 | |
| 3ulq_A | 383 | Response regulator aspartate phosphatase F; tetrat | 98.92 | |
| 4a1s_A | 411 | PINS, partner of inscuteable; cell cycle, LGN, mit | 98.92 | |
| 2ifu_A | 307 | Gamma-SNAP; membrane fusion, snare complex disasse | 98.91 | |
| 3ro2_A | 338 | PINS homolog, G-protein-signaling modulator 2; TPR | 98.91 | |
| 1elw_A | 118 | TPR1-domain of HOP; HOP, TPR-domain, peptide-compl | 98.9 | |
| 2kck_A | 112 | TPR repeat; tetratricopeptide repeat, structural g | 98.9 | |
| 2dba_A | 148 | Smooth muscle cell associated protein-1, isoform 2 | 98.9 | |
| 3dss_A | 331 | Geranylgeranyl transferase type-2 subunit alpha; p | 98.9 | |
| 4g1t_A | 472 | Interferon-induced protein with tetratricopeptide | 98.89 | |
| 2kc7_A | 99 | BFR218_protein; tetratricopeptide repeat, all-alph | 98.89 | |
| 3q49_B | 137 | STIP1 homology and U box-containing protein 1; E3 | 98.89 | |
| 3gw4_A | 203 | Uncharacterized protein; structural genomics, PSI- | 98.88 | |
| 3ro3_A | 164 | PINS homolog, G-protein-signaling modulator 2; asy | 98.88 | |
| 3sf4_A | 406 | G-protein-signaling modulator 2; tetratricopeptide | 98.88 | |
| 3q7a_A | 349 | Farnesyltransferase alpha subunit; protein prenylt | 98.87 | |
| 3u3w_A | 293 | Transcriptional activator PLCR protein; ternary co | 98.87 | |
| 3nf1_A | 311 | KLC 1, kinesin light chain 1; TPR, structural geno | 98.86 | |
| 3bee_A | 93 | Putative YFRE protein; putaive YFRE protein, struc | 98.85 | |
| 3q15_A | 378 | PSP28, response regulator aspartate phosphatase H; | 98.85 | |
| 3r70_A | 320 | Aminoglycoside phosphotransferase; structural geno | 98.85 | |
| 3ulq_A | 383 | Response regulator aspartate phosphatase F; tetrat | 98.83 | |
| 2kat_A | 115 | Uncharacterized protein; NESG, structure, structur | 98.83 | |
| 1ouv_A | 273 | Conserved hypothetical secreted protein; TPR repea | 98.82 | |
| 2xev_A | 129 | YBGF; tetratricopeptide, alpha-helical, metal bind | 98.81 | |
| 1pc2_A | 152 | Mitochondria fission protein; unknown function; NM | 98.79 | |
| 3rjv_A | 212 | Putative SEL1 repeat protein; alpha-alpha superhel | 98.77 | |
| 3n71_A | 490 | Histone lysine methyltransferase SMYD1; heart deve | 98.77 | |
| 3sf4_A | 406 | G-protein-signaling modulator 2; tetratricopeptide | 98.77 | |
| 3gw4_A | 203 | Uncharacterized protein; structural genomics, PSI- | 98.75 | |
| 3ly7_A | 372 | Transcriptional activator CADC; alpha/beta domain, | 98.74 | |
| 4a1s_A | 411 | PINS, partner of inscuteable; cell cycle, LGN, mit | 98.74 | |
| 3ro2_A | 338 | PINS homolog, G-protein-signaling modulator 2; TPR | 98.72 | |
| 3qww_A | 433 | SET and MYND domain-containing protein 2; methyltr | 98.72 | |
| 3d1u_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 98.71 | |
| 3rjv_A | 212 | Putative SEL1 repeat protein; alpha-alpha superhel | 98.69 | |
| 3tdw_A | 306 | Gentamicin resistance protein; kinase, phosphoryl | 98.67 | |
| 1klx_A | 138 | Cysteine rich protein B; structural genomics, heli | 98.66 | |
| 2v5f_A | 104 | Prolyl 4-hydroxylase subunit alpha-1; endoplasmic | 98.65 | |
| 1elr_A | 131 | TPR2A-domain of HOP; HOP, TPR-domain, peptide-comp | 98.64 | |
| 3q15_A | 378 | PSP28, response regulator aspartate phosphatase H; | 98.63 | |
| 4gkh_A | 272 | Aminoglycoside 3'-phosphotransferase APHA1-IAB; py | 98.58 | |
| 3qwp_A | 429 | SET and MYND domain-containing protein 3; SMYD3,SE | 98.58 | |
| 2ooe_A | 530 | Cleavage stimulation factor 77 kDa subunit; HAT do | 98.54 | |
| 4f3v_A | 282 | ESX-1 secretion system protein ECCA1; tetratricope | 98.51 | |
| 3ovc_A | 362 | Hygromycin-B 4-O-kinase; aminoglycoside phosphotra | 98.51 | |
| 3ats_A | 357 | Putative uncharacterized protein; hypothetical pro | 98.51 | |
| 2ooe_A | 530 | Cleavage stimulation factor 77 kDa subunit; HAT do | 98.46 | |
| 1hz4_A | 373 | MALT regulatory protein; two-helix bundles, helix | 98.45 | |
| 1hz4_A | 373 | MALT regulatory protein; two-helix bundles, helix | 98.45 | |
| 3bee_A | 93 | Putative YFRE protein; putaive YFRE protein, struc | 98.35 | |
| 2olc_A | 397 | MTR kinase, methylthioribose kinase; kinase ADP-2H | 98.34 | |
| 2v5f_A | 104 | Prolyl 4-hydroxylase subunit alpha-1; endoplasmic | 98.34 | |
| 3n71_A | 490 | Histone lysine methyltransferase SMYD1; heart deve | 98.33 | |
| 3u64_A | 301 | Protein TP_0956; tetratrico peptide repeat, protei | 98.32 | |
| 1pc2_A | 152 | Mitochondria fission protein; unknown function; NM | 98.32 | |
| 2xm6_A | 490 | Protein corresponding to locus C5321 from CFT073 s | 98.3 | |
| 3e4b_A | 452 | ALGK; tetratricopeptide repeat, superhelix, algina | 98.3 | |
| 2q83_A | 346 | YTAA protein; 2635576, structural genomics, joint | 98.29 | |
| 2xm6_A | 490 | Protein corresponding to locus C5321 from CFT073 s | 98.2 | |
| 1klx_A | 138 | Cysteine rich protein B; structural genomics, heli | 98.15 | |
| 1nzn_A | 126 | CGI-135 protein, fission protein FIS1P; TPR, unkno | 98.07 | |
| 3f7w_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 98.06 | |
| 3e4b_A | 452 | ALGK; tetratricopeptide repeat, superhelix, algina | 98.02 | |
| 3jr1_A | 312 | Putative fructosamine-3-kinase; YP_719053.1, struc | 97.95 | |
| 1xi4_A | 1630 | Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle | 97.91 | |
| 2pyw_A | 420 | Uncharacterized protein; 5-methylthioribose kinase | 97.91 | |
| 2ppq_A | 322 | HSK, HK, homoserine kinase; structural genomics, M | 97.86 | |
| 1xi4_A | 1630 | Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle | 97.86 | |
| 3ffl_A | 167 | Anaphase-promoting complex subunit 7; tetratricope | 97.84 | |
| 4b4t_Q | 434 | 26S proteasome regulatory subunit RPN6; hydrolase, | 97.83 | |
| 1zyl_A | 328 | Hypothetical protein YIHE; putative protein kinase | 97.79 | |
| 2yle_A | 229 | Protein spire homolog 1; actin-binding protein, ac | 97.78 | |
| 4b4t_Q | 434 | 26S proteasome regulatory subunit RPN6; hydrolase, | 97.77 | |
| 3csv_A | 333 | Aminoglycoside phosphotransferase; YP_614837.1, ph | 97.73 | |
| 3mv2_B | 310 | Coatomer subunit epsilon; vesicular membrane coat | 97.73 | |
| 1b89_A | 449 | Protein (clathrin heavy chain); triskelion, coated | 97.67 | |
| 3mv2_B | 310 | Coatomer subunit epsilon; vesicular membrane coat | 97.61 | |
| 3dxq_A | 301 | Choline/ethanolamine kinase family protein; NP_106 | 97.58 | |
| 3u64_A | 301 | Protein TP_0956; tetratrico peptide repeat, protei | 97.53 | |
| 1nw1_A | 429 | Choline kinase (49.2 KD); phospholipid synthesis, | 97.48 | |
| 3ly7_A | 372 | Transcriptional activator CADC; alpha/beta domain, | 97.47 | |
| 3feg_A | 379 | Choline/ethanolamine kinase; non-protein kinase, c | 97.47 | |
| 3qww_A | 433 | SET and MYND domain-containing protein 2; methyltr | 97.45 | |
| 1nzn_A | 126 | CGI-135 protein, fission protein FIS1P; TPR, unkno | 97.43 | |
| 3qwp_A | 429 | SET and MYND domain-containing protein 3; SMYD3,SE | 97.4 | |
| 1b89_A | 449 | Protein (clathrin heavy chain); triskelion, coated | 97.35 | |
| 3o48_A | 134 | Mitochondria fission 1 protein; tetratricopeptide | 97.28 | |
| 3c5i_A | 369 | Choline kinase; choline, kinase, malaria, transfer | 97.25 | |
| 3i1a_A | 339 | Spectinomycin phosphotransferase; protein kinase, | 97.22 | |
| 2qg7_A | 458 | Ethanolamine kinase PV091845; malaria, SGC, struct | 97.12 | |
| 1y8m_A | 144 | FIS1; mitochondria, unknown function; NMR {Sacchar | 97.07 |
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-59 Score=446.06 Aligned_cols=255 Identities=18% Similarity=0.281 Sum_probs=207.5
Q ss_pred CCcccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCc--cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEe
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 133 (484)
++++.+.++||+|+||+||+|++.+ .||||+++..... ..+.|.+|+.+|++++|||||+++|++.+ +.++||||
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmE 111 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEE
Confidence 5677788999999999999998654 5999999754332 35679999999999999999999998864 56899999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC-----
Q 011519 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----- 208 (484)
Q Consensus 134 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~----- 208 (484)
||+||||.++|.. ....+++.++..|+.||+.||.|||++ +||||||||+||||++++++||+|||+|+....
T Consensus 112 y~~gGsL~~~l~~-~~~~l~~~~~~~i~~qia~gL~yLH~~-~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~ 189 (307)
T 3omv_A 112 WCEGSSLYKHLHV-QETKFQMFQLIDIARQTAQGMDYLHAK-NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQ 189 (307)
T ss_dssp CCSSCBHHHHHHT-SCCCCCHHHHHHHHHHHHHHHHHHHHT-TCBCSCCCSSSEEEETTEEEEECCCSSCBC--------
T ss_pred cCCCCCHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CccCCccCHHHEEECCCCcEEEeeccCceecccCCcce
Confidence 9999999999964 345799999999999999999999998 999999999999999999999999999986543
Q ss_pred -CCcccCCCCCCCcccccC---CCCCCCCceeehHHHHHHHhhCCCCCCchhhH-HhhhccccccccccccCCCChHHHH
Q 011519 209 -GRSYSTNLAFTPPEYLRT---GRVTPESVMYSFGTLLLDLLSGKHIPPSHALD-LIRDRNIQTLTDSCLEGQFSSDEGT 283 (484)
Q Consensus 209 -~~~~~~t~~y~aPE~~~~---~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (484)
.....||+.|||||++.+ +.++.++|||||||+||||+||+.||...... ............+. ....+..+++
T Consensus 190 ~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~ 268 (307)
T 3omv_A 190 QVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPD-LSKLYKNCPK 268 (307)
T ss_dssp ----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCC-STTSCTTSCH
T ss_pred eecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCC-cccccccchH
Confidence 234679999999999964 35899999999999999999999998653211 11111111111111 1234556778
Q ss_pred HHHHHHHHHhccCCCCCCChHHHHHHHHhhhcC
Q 011519 284 ELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316 (484)
Q Consensus 284 ~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 316 (484)
.+.+|+.+||+.||++|||+.+|+++|+.++..
T Consensus 269 ~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~ 301 (307)
T 3omv_A 269 AMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp HHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcc
Confidence 999999999999999999999999999988754
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-60 Score=456.33 Aligned_cols=249 Identities=17% Similarity=0.193 Sum_probs=210.2
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCc--cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEe
Q 011519 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 133 (484)
++|+++++||+|+||+||+|+ ..+|+.||||+++..... ..+.|.+|+.+|++|+|||||++++++.+.+.+|||||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 578999999999999999999 467999999999765433 35679999999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----
Q 011519 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 209 (484)
Q Consensus 134 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~---- 209 (484)
||+||+|.++|....+..+++.+++.|+.||+.||.|||++ |||||||||+||||+.+|.+||+|||+++.....
T Consensus 104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~-~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~ 182 (350)
T 4b9d_A 104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR-KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELA 182 (350)
T ss_dssp CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT-TCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHHH
T ss_pred CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeccCCHHHEEECCCCCEEEcccccceeecCCcccc
Confidence 99999999999765667789999999999999999999999 9999999999999999999999999999876543
Q ss_pred CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHH
Q 011519 210 RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289 (484)
Q Consensus 210 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 289 (484)
...+||+.|||||++.+..|+.++|||||||++|||+||+.||................. ...+..+++++.+||
T Consensus 183 ~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~-----~~~~~~~s~~~~~li 257 (350)
T 4b9d_A 183 RACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSF-----PPVSLHYSYDLRSLV 257 (350)
T ss_dssp HHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCC-----CCCCTTSCHHHHHHH
T ss_pred cccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC-----CCCCccCCHHHHHHH
Confidence 345799999999999999999999999999999999999999986543333222221111 123455678999999
Q ss_pred HHHhccCCCCCCChHHHHHHHH
Q 011519 290 SRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 290 ~~cl~~dp~~Rps~~~il~~l~ 311 (484)
.+||+.||++|||+.++++|-+
T Consensus 258 ~~~L~~dP~~R~s~~e~l~hp~ 279 (350)
T 4b9d_A 258 SQLFKRNPRDRPSVNSILEKGF 279 (350)
T ss_dssp HHHTCSSGGGSCCHHHHHTSHH
T ss_pred HHHccCChhHCcCHHHHhcCHH
Confidence 9999999999999999998743
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-59 Score=450.63 Aligned_cols=253 Identities=22% Similarity=0.308 Sum_probs=209.6
Q ss_pred cccccccCCCCCCceEEEEEeC------CCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEE
Q 011519 58 MENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 131 (484)
++.+.++||+|+||+||+|++. +++.||||+++.......++|.+|+++|++++|||||+++|+|.+.+..+||
T Consensus 42 d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV 121 (329)
T 4aoj_A 42 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMV 121 (329)
T ss_dssp GEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEE
T ss_pred HeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 4456678999999999999853 4788999999876655567899999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCC-------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceee
Q 011519 132 AEYMPNDTLAKHLFHWE-------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLS 198 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~~-------------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~ 198 (484)
||||++|+|.++|.... .++++|.+++.|+.||+.||.|||+. +||||||||+||||++++++||+
T Consensus 122 ~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~-~iiHRDLKp~NILl~~~~~~Ki~ 200 (329)
T 4aoj_A 122 FEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL-HFVHRDLATRNCLVGQGLVVKIG 200 (329)
T ss_dssp EECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEEETTTEEEEC
T ss_pred EEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC-CeecccccHhhEEECCCCcEEEc
Confidence 99999999999996432 24699999999999999999999998 99999999999999999999999
Q ss_pred ccCCccccCCC------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccc
Q 011519 199 CFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDS 271 (484)
Q Consensus 199 DfG~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~ 271 (484)
|||+++..... ....||+.|||||++.+..++.++|||||||+||||+| |+.||............. .
T Consensus 201 DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~-----~ 275 (329)
T 4aoj_A 201 DFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCIT-----Q 275 (329)
T ss_dssp CCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHH-----H
T ss_pred ccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHH-----c
Confidence 99999865332 34568999999999999999999999999999999999 888887543222221111 1
Q ss_pred cccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhcC
Q 011519 272 CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316 (484)
Q Consensus 272 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 316 (484)
..+...|..+++++.+|+.+||+.||++|||+.+|+++|+.+.+.
T Consensus 276 g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 276 GRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred CCCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 112234566788999999999999999999999999999998764
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-59 Score=447.83 Aligned_cols=253 Identities=23% Similarity=0.318 Sum_probs=213.0
Q ss_pred cccccccCCCCCCceEEEEEeC------CCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEE
Q 011519 58 MENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 131 (484)
++.+.++||+|+||+||+|++. ++..||||+++.......++|.+|+++|++++|||||+++|+|.+.+..+||
T Consensus 14 ~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV 93 (299)
T 4asz_A 14 NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMV 93 (299)
T ss_dssp GEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEE
T ss_pred HeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEE
Confidence 4567788999999999999853 4788999999876655567899999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccC-----------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeecc
Q 011519 132 AEYMPNDTLAKHLFHW-----------ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCF 200 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~-----------~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Df 200 (484)
||||+||||.++|... ....++|.+++.|+.||+.||.|||++ +||||||||+|||+++++++||+||
T Consensus 94 ~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~-~iiHRDlKp~NILl~~~~~~Ki~DF 172 (299)
T 4asz_A 94 FEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ-HFVHRDLATRNCLVGENLLVKIGDF 172 (299)
T ss_dssp EECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECGGGCEEECCC
T ss_pred EEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCccCHhhEEECCCCcEEECCc
Confidence 9999999999999643 235799999999999999999999998 9999999999999999999999999
Q ss_pred CCccccCCC------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccc
Q 011519 201 GLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCL 273 (484)
Q Consensus 201 G~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 273 (484)
|+++..... ....||+.|||||++.++.++.++|||||||++|||+| |+.||.......+...... ..
T Consensus 173 Gla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~-----~~ 247 (299)
T 4asz_A 173 GMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQ-----GR 247 (299)
T ss_dssp SCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHH-----TC
T ss_pred ccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc-----CC
Confidence 999865332 23458999999999999999999999999999999999 8888875433222211111 11
Q ss_pred cCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhcC
Q 011519 274 EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316 (484)
Q Consensus 274 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 316 (484)
....|..+++++.+|+.+||+.||++|||+.+|+..|+.+.+.
T Consensus 248 ~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~ 290 (299)
T 4asz_A 248 VLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290 (299)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 2234566788999999999999999999999999999987653
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-59 Score=447.77 Aligned_cols=252 Identities=20% Similarity=0.269 Sum_probs=211.7
Q ss_pred CCcccccccCCCCCCceEEEEEe------CCCcEEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCce
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDER 128 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 128 (484)
++..+++++||+|+||+||+|.+ .+++.||||+++..... ..++|.+|+.+|++++|||||+++|+|.+.+..
T Consensus 25 ~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~ 104 (308)
T 4gt4_A 25 LSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPL 104 (308)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEE
Confidence 45667888999999999999985 24688999999765433 357899999999999999999999999999999
Q ss_pred EEEEecCCCCCHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCC
Q 011519 129 LLVAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN 194 (484)
Q Consensus 129 ~lv~Ey~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~ 194 (484)
+||||||++|||.++|.... ...++|.+++.|+.||+.||.|||++ +||||||||+||||+++++
T Consensus 105 ~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~-~iiHRDLK~~NILl~~~~~ 183 (308)
T 4gt4_A 105 SMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH-HVVHKDLATRNVLVYDKLN 183 (308)
T ss_dssp EEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECGGGC
T ss_pred EEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC-CCCCCCccccceEECCCCC
Confidence 99999999999999996422 24689999999999999999999999 9999999999999999999
Q ss_pred ceeeccCCccccCC------CCcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccc
Q 011519 195 PRLSCFGLMKNSRD------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQT 267 (484)
Q Consensus 195 ~kl~DfG~a~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~ 267 (484)
+||+|||+++.... .....||+.|||||++.++.++.++|||||||+||||+| |..||.+.....+.....
T Consensus 184 ~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i~-- 261 (308)
T 4gt4_A 184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIR-- 261 (308)
T ss_dssp EEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHH--
T ss_pred EEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHHH--
Confidence 99999999986432 234578999999999999999999999999999999999 788876543322221111
Q ss_pred cccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhh
Q 011519 268 LTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL 313 (484)
Q Consensus 268 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~ 313 (484)
.......|..+++.+.+|+.+||+.||++|||+.+|+++|+.+
T Consensus 262 ---~~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 262 ---NRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp ---TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred ---cCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 1112234567788999999999999999999999999999865
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-59 Score=452.89 Aligned_cols=248 Identities=17% Similarity=0.220 Sum_probs=213.1
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecC
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~ 135 (484)
..|+++++||+|+||+||+|+. .+|+.||||+++.......+.+.+|+.+|+.++|||||+++++|.+.+.+|||||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 3588899999999999999994 579999999997655555667899999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----Cc
Q 011519 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RS 211 (484)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~----~~ 211 (484)
+||+|.+++.+ +.+++.++..|+.||+.||.|||++ |||||||||+||||+.+|.+||+|||+++..... .+
T Consensus 154 ~gg~L~~~l~~---~~l~e~~~~~~~~qi~~aL~ylH~~-~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~ 229 (346)
T 4fih_A 154 EGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQ-GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKS 229 (346)
T ss_dssp TTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCC
T ss_pred CCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC-CcccccCCHHHEEECCCCCEEEecCcCceecCCCCCcccc
Confidence 99999999963 4699999999999999999999999 9999999999999999999999999999876432 46
Q ss_pred ccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHH
Q 011519 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291 (484)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 291 (484)
.+||+.|||||++.+..|+.++|||||||++|||+||+.||................. .....+..+++++.+||.+
T Consensus 230 ~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~---~~~~~~~~~s~~~~dli~~ 306 (346)
T 4fih_A 230 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP---PRLKNLHKVSPSLKGFLDR 306 (346)
T ss_dssp CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSC---CCCSCGGGSCHHHHHHHHH
T ss_pred cccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC---CCCCccccCCHHHHHHHHH
Confidence 7899999999999999999999999999999999999999876533222211111111 0112335567899999999
Q ss_pred HhccCCCCCCChHHHHHHHH
Q 011519 292 CLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 292 cl~~dp~~Rps~~~il~~l~ 311 (484)
||..||++|||+.|+++|-+
T Consensus 307 ~L~~dP~~R~ta~e~l~Hp~ 326 (346)
T 4fih_A 307 LLVRDPAQRATAAELLKHPF 326 (346)
T ss_dssp HSCSSTTTSCCHHHHTTCGG
T ss_pred HcCCChhHCcCHHHHhcCHh
Confidence 99999999999999999854
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-59 Score=446.81 Aligned_cols=257 Identities=17% Similarity=0.126 Sum_probs=213.3
Q ss_pred CCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEe
Q 011519 55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (484)
Q Consensus 55 ~f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 133 (484)
.+..+.+.++||+|+||+||+|+. .+|+.||||+++.... +.+|+.+|+.++|||||++++++.+.+.+|||||
T Consensus 56 ~~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmE 130 (336)
T 4g3f_A 56 EVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFME 130 (336)
T ss_dssp TTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred chhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence 345677888899999999999994 6799999999976432 2479999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCC-CceeeccCCccccCCC---
Q 011519 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV-NPRLSCFGLMKNSRDG--- 209 (484)
Q Consensus 134 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~-~~kl~DfG~a~~~~~~--- 209 (484)
||+||+|.++|. ..+.+++.++..|+.||+.||.|||++ |||||||||+||||+.+| .+||+|||+++.....
T Consensus 131 y~~gg~L~~~l~--~~~~l~e~~~~~~~~qi~~aL~ylH~~-~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~ 207 (336)
T 4g3f_A 131 LLEGGSLGQLIK--QMGCLPEDRALYYLGQALEGLEYLHTR-RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLG 207 (336)
T ss_dssp CCTTCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHTT-TEECSCCCGGGEEECTTSCCEEECCCTTCEEC------
T ss_pred ccCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcc
Confidence 999999999997 345799999999999999999999999 999999999999999887 5999999999875432
Q ss_pred ------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHH
Q 011519 210 ------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283 (484)
Q Consensus 210 ------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (484)
...+||+.|||||++.+..++.++|||||||++|||+||+.||................ .....++..+++
T Consensus 208 ~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~---~~~~~~~~~~s~ 284 (336)
T 4g3f_A 208 KSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEP---PPIREIPPSCAP 284 (336)
T ss_dssp ------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSC---CGGGGSCTTSCH
T ss_pred cceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCC---CCchhcCccCCH
Confidence 23579999999999999999999999999999999999999986542211111111110 111134566788
Q ss_pred HHHHHHHHHhccCCCCCCChHHHHHHHHhhhcCCCCCcc
Q 011519 284 ELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEVPSH 322 (484)
Q Consensus 284 ~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~~~~~ 322 (484)
.+.+||.+||+.||.+|||+.|++++|...........+
T Consensus 285 ~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~h 323 (336)
T 4g3f_A 285 LTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKS 323 (336)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCS
T ss_pred HHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccC
Confidence 999999999999999999999999999887665544333
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-57 Score=482.62 Aligned_cols=400 Identities=15% Similarity=0.126 Sum_probs=295.9
Q ss_pred CcccccccCCCCCCceEEEEEeC--CCcEEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCc-----e
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLE--NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDE-----R 128 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~-----~ 128 (484)
.+|++++.||+|+||+||+|... +++.||||++...... ....+.+|+.++.+++||||+++++++...+. .
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 57889999999999999999964 6899999998754332 34578999999999999999999999987765 7
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC
Q 011519 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 208 (484)
Q Consensus 129 ~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~ 208 (484)
||||||++|++|.+++. ..+++.+++.|+.||+.||.|||+. |||||||||+|||++.+ .+||+|||+++....
T Consensus 160 ~lv~E~~~g~~L~~~~~----~~l~~~~~~~~~~qi~~aL~~lH~~-giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~ 233 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKG----QKLPVAEAIAYLLEILPALSYLHSI-GLVYNDLKPENIMLTEE-QLKLIDLGAVSRINS 233 (681)
T ss_dssp EEEEECCCCEECC--------CCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECSS-CEEECCCTTCEETTC
T ss_pred EEEEEeCCCCcHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHC-CCeecccChHHeEEeCC-cEEEEecccchhccc
Confidence 99999999999998874 2699999999999999999999999 99999999999999975 999999999998877
Q ss_pred CCcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHH
Q 011519 209 GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288 (484)
Q Consensus 209 ~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 288 (484)
.....||+.|+|||++.++. +.++|||||||++|+|++|..|+.... ...+. ........++.+.+|
T Consensus 234 ~~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~--------~~~~~----~~~~~~~~~~~l~~l 300 (681)
T 2pzi_A 234 FGYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRY--------VDGLP----EDDPVLKTYDSYGRL 300 (681)
T ss_dssp CSCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEE--------CSSCC----TTCHHHHHCHHHHHH
T ss_pred CCccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccc--------ccccc----ccccccccCHHHHHH
Confidence 77788999999999987654 889999999999999999987654321 11111 111112345789999
Q ss_pred HHHHhccCCCCCCC-hHHHHHHHHhhhcCCCCCcccccCCCCCCCCCCCCCCCCcccccchh----------------HH
Q 011519 289 ASRCLQYEPRERPN-PRSLVTALVTLQKDTEVPSHVLMGIPHGAAALPLSPLGDACLRMDLT----------------AI 351 (484)
Q Consensus 289 i~~cl~~dp~~Rps-~~~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~----------------~~ 351 (484)
|.+||+.||.+||+ ++++.+.|..+........ .+.+.+..+...+|.........+. ..
T Consensus 301 i~~~l~~dP~~R~~~~~~l~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (681)
T 2pzi_A 301 LRRAIDPDPRQRFTTAEEMSAQLTGVLREVVAQD---TGVPRPGLSTIFSPSRSTFGVDLLVAHTDVYLDGQVHAEKLTA 377 (681)
T ss_dssp HHHHTCSSGGGSCSSHHHHHHHHHHHHHHHHHHH---HSCCCCCCCSSBCCCSSCCSSSHHHHGGGHHHHCCCCCCCCCH
T ss_pred HhhhccCChhhCCCHHHHHHHHHHHHHHHhhccc---cCCCCCcccccCCcccccccchhhhhhcccccccccccccCCH
Confidence 99999999999995 5555555655432110000 0000000000000100000000000 00
Q ss_pred HHHHH------------------HhCCcCchhhHhhhh------------hhhHHHhhhhhHhHHHHHhccCHHHHHHHH
Q 011519 352 HEILE------------------KLGYKDDEGAATEMW------------TGQMQETLNSKKKGDVAFRHKDFRASIECY 401 (484)
Q Consensus 352 ~e~l~------------------~~~y~~~~~~a~e~~------------~~~~~~a~~~~~~g~~~~~~~~~~~A~~~~ 401 (484)
.++.. .... .+...+.+.. ...+..+..+...|..+++.|+|++|+..|
T Consensus 378 ~~~~~~L~~p~~~p~~~~a~~~~a~~~-~~~~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~ 456 (681)
T 2pzi_A 378 NEIVTALSVPLVDPTDVAASVLQATVL-SQPVQTLDSLRAARHGALDADGVDFSESVELPLMEVRALLDLGDVAKATRKL 456 (681)
T ss_dssp HHHHHHSCCBCCCTTSTTHHHHHHTTT-CCHHHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHhhCCCccCCCCCcchHHhhcccc-cCHHHHHHHHHHhhhhcccccccccccchhHHHHHHHHHHhcCCHHHHHHHH
Confidence 11111 1110 1111222211 122455677888899999999999999999
Q ss_pred HHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 402 TQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 402 ~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
+++++++|+ ++.+|+++|.+|..+|++++|+.+|++|++++|+++.+|+++|.+|..+|++++ ++.|++|++++|++.
T Consensus 457 ~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~~ 534 (681)
T 2pzi_A 457 DDLAERVGW-RWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLALAATAELAGNTDE-HKFYQTVWSTNDGVI 534 (681)
T ss_dssp HHHHHHHCC-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTCH
T ss_pred HHHhccCcc-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCchH
Confidence 999999999 899999999999999999999999999999999999999999999999999999 999999999988653
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-58 Score=429.68 Aligned_cols=246 Identities=19% Similarity=0.244 Sum_probs=198.8
Q ss_pred CCcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCc---cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEE
Q 011519 56 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 131 (484)
..+|++++.||+|+||+||+|. ..+|+.||||+++..... ..+++.+|+.+|++++|||||++++++.+.+..|||
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv 91 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 3578999999999999999999 567999999999765322 256799999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC--
Q 011519 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 209 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~-- 209 (484)
|||| +|+|.+++.+ .+.+++.++..++.||+.||.|||++ ||+||||||+|||++.++.+||+|||+|+.....
T Consensus 92 mEy~-~g~L~~~l~~--~~~l~e~~~~~~~~qi~~al~ylH~~-~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~ 167 (275)
T 3hyh_A 92 IEYA-GNELFDYIVQ--RDKMSEQEARRFFQQIISAVEYCHRH-KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF 167 (275)
T ss_dssp EECC-CEEHHHHHHH--SCSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCTTTEEECTTCCEEECCSSCC--------
T ss_pred EeCC-CCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CcccccCChHHeEECCCCCEEEeecCCCeecCCCCc
Confidence 9999 6799999973 45799999999999999999999999 9999999999999999999999999999875543
Q ss_pred -CcccCCCCCCCcccccCCCC-CCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHH
Q 011519 210 -RSYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287 (484)
Q Consensus 210 -~~~~~t~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (484)
.+..||+.|||||++.+..+ +.++|||||||++|+|+||+.||............... ...++...++++.+
T Consensus 168 ~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~------~~~~p~~~s~~~~~ 241 (275)
T 3hyh_A 168 LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNG------VYTLPKFLSPGAAG 241 (275)
T ss_dssp -------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT------CCCCCTTSCHHHHH
T ss_pred cCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHH
Confidence 45789999999999998876 57999999999999999999999765443332221111 11345567789999
Q ss_pred HHHHHhccCCCCCCChHHHHHHHH
Q 011519 288 LASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 288 li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
|+.+||+.||++|||+.|+++|-+
T Consensus 242 li~~~L~~dP~~R~s~~eil~hpw 265 (275)
T 3hyh_A 242 LIKRMLIVNPLNRISIHEIMQDDW 265 (275)
T ss_dssp HHHHHSCSSGGGSCCHHHHHHCHH
T ss_pred HHHHHccCChhHCcCHHHHHcCcc
Confidence 999999999999999999999854
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-59 Score=442.24 Aligned_cols=244 Identities=17% Similarity=0.184 Sum_probs=211.4
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCC---CccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEE
Q 011519 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 132 (484)
++|++++.||+|+||+||+|+ ..+|+.||||++.+.. ....+.+.+|+++|++++|||||++++++.+.+.+||||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 468999999999999999999 5679999999996532 223567999999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC---
Q 011519 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--- 209 (484)
Q Consensus 133 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~--- 209 (484)
|||+||+|.++|. ..+.+++.++..++.||+.||.|||++ |||||||||+|||++.++.+||+|||+|+.....
T Consensus 112 Ey~~gG~L~~~i~--~~~~l~e~~~~~~~~qi~~al~ylH~~-~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~ 188 (311)
T 4aw0_A 112 SYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLHGK-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 188 (311)
T ss_dssp CCCTTEEHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTC
T ss_pred ecCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCc
Confidence 9999999999997 346799999999999999999999999 9999999999999999999999999999875422
Q ss_pred ---CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHH
Q 011519 210 ---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 286 (484)
Q Consensus 210 ---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 286 (484)
.+.+||+.|||||++.+..++.++|||||||++|||+||+.||.......+....... ...+|..+++++.
T Consensus 189 ~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~------~~~~p~~~s~~~~ 262 (311)
T 4aw0_A 189 ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKL------EYDFPEKFFPKAR 262 (311)
T ss_dssp CCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT------CCCCCTTCCHHHH
T ss_pred ccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC------CCCCCcccCHHHH
Confidence 3568999999999999999999999999999999999999999765443332222211 1134566778999
Q ss_pred HHHHHHhccCCCCCCChHHHHHH
Q 011519 287 RLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 287 ~li~~cl~~dp~~Rps~~~il~~ 309 (484)
+||.+||..||++|||+.|++.+
T Consensus 263 dli~~lL~~dp~~R~t~~e~~~~ 285 (311)
T 4aw0_A 263 DLVEKLLVLDATKRLGCEEMEGY 285 (311)
T ss_dssp HHHHHHSCSSGGGSTTSGGGTCH
T ss_pred HHHHHHccCCHhHCcChHHHcCC
Confidence 99999999999999999987544
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-58 Score=454.20 Aligned_cols=248 Identities=17% Similarity=0.223 Sum_probs=213.4
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecC
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~ 135 (484)
..|+++++||+|+||+||+|+. .+|+.||||++........+.+.+|+.+|+.++|||||+++++|.+.+.+|||||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 3588999999999999999994 579999999998766556677999999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----Cc
Q 011519 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RS 211 (484)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~----~~ 211 (484)
+||+|.+++.. +.+++.++..|+.||+.||.|||++ |||||||||+||||+.+|.+||+|||+++..... .+
T Consensus 231 ~gG~L~~~i~~---~~l~e~~~~~~~~qil~aL~ylH~~-~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~ 306 (423)
T 4fie_A 231 EGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQ-GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKS 306 (423)
T ss_dssp TTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBCC
T ss_pred CCCcHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHHC-CeecccCCHHHEEEcCCCCEEEecCccceECCCCCccccc
Confidence 99999999953 4699999999999999999999999 9999999999999999999999999999875432 45
Q ss_pred ccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHH
Q 011519 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291 (484)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 291 (484)
.+||+.|||||++.+..|+.++|||||||++|||++|+.||.................. ....+..+++++.+||.+
T Consensus 307 ~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~---~~~~~~~~s~~~~dli~~ 383 (423)
T 4fie_A 307 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP---RLKNLHKVSPSLKGFLDR 383 (423)
T ss_dssp CEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCC---CCSCTTSSCHHHHHHHHH
T ss_pred cccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCC---CCcccccCCHHHHHHHHH
Confidence 68999999999999999999999999999999999999998765332222111111111 112234567899999999
Q ss_pred HhccCCCCCCChHHHHHHHH
Q 011519 292 CLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 292 cl~~dp~~Rps~~~il~~l~ 311 (484)
||..||++|||+.|+++|-+
T Consensus 384 ~L~~dP~~R~ta~ell~Hp~ 403 (423)
T 4fie_A 384 LLVRDPAQRATAAELLKHPF 403 (423)
T ss_dssp HSCSSTTTSCCHHHHTTCGG
T ss_pred HcCCChhHCcCHHHHhcCHH
Confidence 99999999999999999854
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-58 Score=433.23 Aligned_cols=244 Identities=18% Similarity=0.247 Sum_probs=200.2
Q ss_pred cccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCc--cHHHHHHHHHHHhcCCCCceeeeeeeeee----CCceEEEE
Q 011519 60 NIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCE----GDERLLVA 132 (484)
Q Consensus 60 ~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~----~~~~~lv~ 132 (484)
++..+||+|+||+||+|.. .+++.||||++...... ..++|.+|+.+|++++|||||+++++|.+ .+.+||||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 5556799999999999994 57899999999654322 35679999999999999999999999865 34589999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC--cccccccccceeecC-CCCceeeccCCccccCCC
Q 011519 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKER--ALYHDLNAYRIVFDD-DVNPRLSCFGLMKNSRDG 209 (484)
Q Consensus 133 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~--ivH~Dlkp~Nill~~-~~~~kl~DfG~a~~~~~~ 209 (484)
|||+||+|.++|. +.+.+++..+..|+.||+.||.|||++ + ||||||||+||||++ +|.+||+|||+|+.....
T Consensus 109 Ey~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~ 185 (290)
T 3fpq_A 109 ELMTSGTLKTYLK--RFKVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS 185 (290)
T ss_dssp ECCCSCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTT
T ss_pred eCCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCC
Confidence 9999999999997 346799999999999999999999998 7 999999999999984 799999999999865443
Q ss_pred --CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhh-HHhhhccccccccccccCCCChHHHHHHH
Q 011519 210 --RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL-DLIRDRNIQTLTDSCLEGQFSSDEGTELV 286 (484)
Q Consensus 210 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 286 (484)
.+.+||+.|||||++.+ .++.++|||||||++|||+||+.||..... ..+......... ...++...++++.
T Consensus 186 ~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~----~~~~~~~~~~~~~ 260 (290)
T 3fpq_A 186 FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVK----PASFDKVAIPEVK 260 (290)
T ss_dssp SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCC----CGGGGGCCCHHHH
T ss_pred ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCC----CCCCCccCCHHHH
Confidence 35689999999999874 699999999999999999999999864321 111111111111 1122334457899
Q ss_pred HHHHHHhccCCCCCCChHHHHHHHH
Q 011519 287 RLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 287 ~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
+||.+||+.||++|||+.++++|-+
T Consensus 261 ~li~~~L~~dP~~R~s~~e~l~Hp~ 285 (290)
T 3fpq_A 261 EIIEGCIRQNKDERYSIKDLLNHAF 285 (290)
T ss_dssp HHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred HHHHHHccCChhHCcCHHHHhcCcc
Confidence 9999999999999999999998843
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-58 Score=435.92 Aligned_cols=245 Identities=17% Similarity=0.185 Sum_probs=203.5
Q ss_pred CcccccccCCCCCCceEEEEEe----CCCcEEEEEEecCCCCc--cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL----ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 130 (484)
++|++++.||+|+||+||+|+. .+++.||||+++..... ...++.+|+.+|++++|||||++++++.+.+.+||
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 4689999999999999999984 24788999999754322 24468899999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC--
Q 011519 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-- 208 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~-- 208 (484)
|||||+||+|.++|. +.+.+++.++..++.||+.||.|||++ |||||||||+|||++.+|.+||+|||+|+....
T Consensus 104 vmEy~~gg~L~~~l~--~~~~l~e~~~~~~~~qi~~aL~ylH~~-~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 180 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLS--KEVMFTEEDVKFYLAELALALDHLHSL-GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE 180 (304)
T ss_dssp EECCCTTCEEHHHHH--HHCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSSCCGGGEEECTTSCEEEESSEEEEC-----
T ss_pred EEEcCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CCcCCCCCHHHeEEcCCCCEEecccccceeccCCC
Confidence 999999999999997 345799999999999999999999999 999999999999999999999999999986432
Q ss_pred --CCcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHH
Q 011519 209 --GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 286 (484)
Q Consensus 209 --~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 286 (484)
..+.+||+.|||||++.+..++.++|||||||++|||+||+.||.+............. ...+|..+++++.
T Consensus 181 ~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~------~~~~p~~~s~~~~ 254 (304)
T 3ubd_A 181 KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA------KLGMPQFLSPEAQ 254 (304)
T ss_dssp CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHH
T ss_pred ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcC------CCCCCCcCCHHHH
Confidence 24578999999999999999999999999999999999999999765433332222111 1134566788999
Q ss_pred HHHHHHhccCCCCCCCh-----HHHHHHH
Q 011519 287 RLASRCLQYEPRERPNP-----RSLVTAL 310 (484)
Q Consensus 287 ~li~~cl~~dp~~Rps~-----~~il~~l 310 (484)
+||.+||+.||++|||+ +++++|-
T Consensus 255 ~li~~~L~~dP~~R~ta~~~~~~eil~Hp 283 (304)
T 3ubd_A 255 SLLRMLFKRNPANRLGAGPDGVEEIKRHS 283 (304)
T ss_dssp HHHHHHTCSSGGGSTTCSTTTHHHHHTSG
T ss_pred HHHHHHcccCHHHCCCCCcCCHHHHHcCc
Confidence 99999999999999984 6888773
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-56 Score=436.60 Aligned_cols=255 Identities=20% Similarity=0.258 Sum_probs=211.3
Q ss_pred CCcccccccCCCCCCceEEEEEeC------CCcEEEEEEecCCCCcc-HHHHHHHHHHHhcCCC-CceeeeeeeeeeC-C
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWPD-ARQFLEEARAVGQLRN-RRLANLLGCCCEG-D 126 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h-pniv~l~~~~~~~-~ 126 (484)
.+++++++.||+|+||+||+|.+. .++.||||+++...... .+.|.+|+.+|.+++| ||||+++|+|.+. +
T Consensus 63 ~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~ 142 (353)
T 4ase_A 63 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 142 (353)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS
T ss_pred HHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCC
Confidence 467888999999999999999842 23679999998655433 5679999999999965 8999999999764 5
Q ss_pred ceEEEEecCCCCCHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCC
Q 011519 127 ERLLVAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 192 (484)
Q Consensus 127 ~~~lv~Ey~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~ 192 (484)
.++||||||++|+|.++|+... ...+++.++..|+.||+.||.|||++ +||||||||+|||++++
T Consensus 143 ~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~-~iiHRDLK~~NILl~~~ 221 (353)
T 4ase_A 143 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR-KCIHRDLAARNILLSEK 221 (353)
T ss_dssp CCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECGG
T ss_pred EEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC-CeecCccCccceeeCCC
Confidence 6899999999999999996432 34589999999999999999999999 99999999999999999
Q ss_pred CCceeeccCCccccCCC------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccc
Q 011519 193 VNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNI 265 (484)
Q Consensus 193 ~~~kl~DfG~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~ 265 (484)
+++||+|||+|+..... ....||+.|||||++.+..++.++|||||||+||||+| |+.||+........
T Consensus 222 ~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~---- 297 (353)
T 4ase_A 222 NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---- 297 (353)
T ss_dssp GCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHH----
T ss_pred CCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHH----
Confidence 99999999999876443 23467899999999999999999999999999999998 88888653221111
Q ss_pred cccccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhc
Q 011519 266 QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 315 (484)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~ 315 (484)
........+...|..+++++.+|+..||+.||++|||+.+|+++|..+.+
T Consensus 298 ~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq 347 (353)
T 4ase_A 298 CRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 347 (353)
T ss_dssp HHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHH
Confidence 11111112234556677899999999999999999999999999988754
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-55 Score=416.12 Aligned_cols=241 Identities=18% Similarity=0.247 Sum_probs=190.3
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCceeeeeeeeeeCC---------
Q 011519 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGD--------- 126 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~--------- 126 (484)
+|++++.||+|+||+||+|+. .+|+.||||+++..... ..+.+.+|+.+|++++|||||++++++.+.+
T Consensus 6 dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~ 85 (299)
T 4g31_A 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSS 85 (299)
T ss_dssp HEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC---------
T ss_pred hCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccC
Confidence 578899999999999999994 57999999999765433 2467999999999999999999999987654
Q ss_pred ---ceEEEEecCCCCCHHhhhccCCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCC
Q 011519 127 ---ERLLVAEYMPNDTLAKHLFHWET-QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGL 202 (484)
Q Consensus 127 ---~~~lv~Ey~~~gsL~~~l~~~~~-~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~ 202 (484)
.+|||||||+||+|.+++..... ...++..++.|+.||+.||.|||++ |||||||||+|||++.++.+||+|||+
T Consensus 86 ~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~-~IiHRDlKp~NILl~~~~~vKl~DFGl 164 (299)
T 4g31_A 86 PKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK-GLMHRDLKPSNIFFTMDDVVKVGDFGL 164 (299)
T ss_dssp -CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTCCEEECCCCC
T ss_pred CCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC-cCccccCcHHHeEECCCCcEEEccCcc
Confidence 36999999999999999974322 2356677899999999999999999 999999999999999999999999999
Q ss_pred ccccCCC----------------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcccc
Q 011519 203 MKNSRDG----------------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ 266 (484)
Q Consensus 203 a~~~~~~----------------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~ 266 (484)
|+..... ...+||+.|||||++.+..++.++|||||||++|||++ ||......... ..
T Consensus 165 a~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~~~---~~ 238 (299)
T 4g31_A 165 VTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVRT---LT 238 (299)
T ss_dssp C--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHH---HH
T ss_pred ceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHHHH---HH
Confidence 9875432 23469999999999999999999999999999999996 56543211110 00
Q ss_pred ccccccccCCCC---hHHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 267 TLTDSCLEGQFS---SDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 267 ~~~~~~~~~~~~---~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
.+ ....+| ...++.+.+||.+||+.||++|||+.++++|
T Consensus 239 ~~----~~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 280 (299)
T 4g31_A 239 DV----RNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280 (299)
T ss_dssp HH----HTTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HH----hcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 00 111222 2345678899999999999999999999987
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-55 Score=420.49 Aligned_cols=253 Identities=15% Similarity=0.195 Sum_probs=195.4
Q ss_pred cccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHH--HHHHHHHhcCCCCceeeeeeeeeeCC----ceEEE
Q 011519 58 MENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQF--LEEARAVGQLRNRRLANLLGCCCEGD----ERLLV 131 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~--~~E~~~l~~l~hpniv~l~~~~~~~~----~~~lv 131 (484)
++.+.++||+|+||+||+|++ +|+.||||+++... .+.+ ..|+..+.+++|||||++++++.+.+ .++||
T Consensus 4 ~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~---~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV 79 (303)
T 3hmm_A 4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 79 (303)
T ss_dssp GEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc---hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEE
Confidence 345667899999999999998 58899999996532 3333 44566667889999999999998754 57999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcC-------CCcccccccccceeecCCCCceeeccCCcc
Q 011519 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK-------ERALYHDLNAYRIVFDDDVNPRLSCFGLMK 204 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~-------~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~ 204 (484)
||||+||||.++|+. .+++|..+.+++.|++.||.|||+. .+||||||||+||||+.++++||+|||+++
T Consensus 80 ~Ey~~~gsL~~~l~~---~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~ 156 (303)
T 3hmm_A 80 SDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 156 (303)
T ss_dssp EECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred ecCCCCCcHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCc
Confidence 999999999999963 4699999999999999999999974 289999999999999999999999999998
Q ss_pred ccCCC--------CcccCCCCCCCcccccCC------CCCCCCceeehHHHHHHHhhCCCCCCchhhHH-----h-----
Q 011519 205 NSRDG--------RSYSTNLAFTPPEYLRTG------RVTPESVMYSFGTLLLDLLSGKHIPPSHALDL-----I----- 260 (484)
Q Consensus 205 ~~~~~--------~~~~~t~~y~aPE~~~~~------~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~-----~----- 260 (484)
..... ....||+.|||||++.+. .++.++|||||||++|||+||..|+....... .
T Consensus 157 ~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~ 236 (303)
T 3hmm_A 157 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 236 (303)
T ss_dssp EEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSC
T ss_pred cccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccc
Confidence 65432 234689999999999764 36789999999999999999986653211000 0
Q ss_pred -hhccccccccccccCCCC-----hHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhcCC
Q 011519 261 -RDRNIQTLTDSCLEGQFS-----SDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (484)
Q Consensus 261 -~~~~~~~~~~~~~~~~~~-----~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 317 (484)
.......+.....+..+| ...+..+.+|+.+||+.||++|||+.+|++.|+.+.+..
T Consensus 237 ~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~~ 299 (303)
T 3hmm_A 237 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp CHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred hHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHHc
Confidence 000000011111122222 345678999999999999999999999999999987654
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-53 Score=418.56 Aligned_cols=251 Identities=15% Similarity=0.233 Sum_probs=203.2
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCc--cHHHHHHHHHHHhcCCCCceeeeeeeeee------CCc
Q 011519 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCE------GDE 127 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~------~~~ 127 (484)
++|++++.||+|+||+||+|+ ..+|+.||||+++..... ..+++.+|+.+|+.++|||||++++++.. .+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 369999999999999999999 467999999999765432 35678999999999999999999998764 357
Q ss_pred eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccC
Q 011519 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 207 (484)
Q Consensus 128 ~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~ 207 (484)
+|||||||+ |+|.++|. ..+.+++.++..|+.||+.||.|||++ |||||||||+|||++.++.+||+|||+++...
T Consensus 134 ~~ivmE~~~-g~L~~~i~--~~~~l~~~~~~~~~~qil~al~ylH~~-~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~ 209 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIH--SSQPLTLEHVRYFLYQLLRGLKYMHSA-QVIHRDLKPSNLLVNENCELKIGDFGMARGLC 209 (398)
T ss_dssp EEEEEECCS-EEHHHHHT--SSSCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTCCEEECCCTTCBCC-
T ss_pred EEEEEeCCC-CCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-cCcCCCcCccccccCCCCCEEEeecceeeecc
Confidence 899999995 68999997 456799999999999999999999999 99999999999999999999999999998653
Q ss_pred C--------CCcccCCCCCCCcccccCCC-CCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcccccc-------c--
Q 011519 208 D--------GRSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL-------T-- 269 (484)
Q Consensus 208 ~--------~~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~-------~-- 269 (484)
. ..+.+||+.|||||++.+.. ++.++||||+||++|||+||+.||.+.............. .
T Consensus 210 ~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~ 289 (398)
T 4b99_A 210 TSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQA 289 (398)
T ss_dssp ------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-
T ss_pred cCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhh
Confidence 2 23568999999999988754 6999999999999999999999997643221111100000 0
Q ss_pred ----------cccc-cCC-----CChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 270 ----------DSCL-EGQ-----FSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 270 ----------~~~~-~~~-----~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
.... ... ..+..++++.+||.+||..||.+|||+.++++|-+
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~ 347 (398)
T 4b99_A 290 VGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPF 347 (398)
T ss_dssp ----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGG
T ss_pred hhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHh
Confidence 0000 000 01234678999999999999999999999999854
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-51 Score=403.41 Aligned_cols=247 Identities=18% Similarity=0.215 Sum_probs=198.0
Q ss_pred CcccccccCCCCCCceEEEEEe----CCCcEEEEEEecCCCCccHHHHHHHHHHHhcC-CCCceeeeeeeeeeCCceEEE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL----ENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLV 131 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv 131 (484)
+.|++++.||+|+||+||+|+. .+++.||||++.... ...++.+|+++|+.+ +|||||++++++.+.++++||
T Consensus 21 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lv 98 (361)
T 4f9c_A 21 NVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIA 98 (361)
T ss_dssp GTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEE
T ss_pred CcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEE
Confidence 3588999999999999999984 246889999987543 456788999999998 699999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCC-CCceeeccCCccccCCC-
Q 011519 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD-VNPRLSCFGLMKNSRDG- 209 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~-~~~kl~DfG~a~~~~~~- 209 (484)
||||+||+|.+++. .+++.++..++.||+.||.|||++ |||||||||+|||++.+ +.+||+|||+|+.....
T Consensus 99 mE~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~-gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~ 172 (361)
T 4f9c_A 99 MPYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQF-GIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTK 172 (361)
T ss_dssp EECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCS
T ss_pred EeCCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHC-CeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCcc
Confidence 99999999999983 489999999999999999999999 99999999999999876 79999999999754321
Q ss_pred -------------------------------CcccCCCCCCCcccccCCC-CCCCCceeehHHHHHHHhhCCCCCCchhh
Q 011519 210 -------------------------------RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHAL 257 (484)
Q Consensus 210 -------------------------------~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~tg~~p~~~~~~ 257 (484)
...+||+.|+|||++.+.. ++.++||||+||++|||+||+.||.....
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~ 252 (361)
T 4f9c_A 173 IELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASD 252 (361)
T ss_dssp CGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSS
T ss_pred ccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCC
Confidence 2346999999999998764 89999999999999999999999854321
Q ss_pred HHhhhccc-------------------------------cccc--------------c----ccccCCCChHHHHHHHHH
Q 011519 258 DLIRDRNI-------------------------------QTLT--------------D----SCLEGQFSSDEGTELVRL 288 (484)
Q Consensus 258 ~~~~~~~~-------------------------------~~~~--------------~----~~~~~~~~~~~~~~l~~l 288 (484)
+...-..+ .... . ...........++++.+|
T Consensus 253 ~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DL 332 (361)
T 4f9c_A 253 DLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDL 332 (361)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHHHHHH
T ss_pred HHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHHHHH
Confidence 10000000 0000 0 000001123356789999
Q ss_pred HHHHhccCCCCCCChHHHHHHHH
Q 011519 289 ASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 289 i~~cl~~dp~~Rps~~~il~~l~ 311 (484)
+.+||..||++|||++|+++|-+
T Consensus 333 l~~lL~~dP~~R~ta~eaL~Hp~ 355 (361)
T 4f9c_A 333 LDKLLDLNPASRITAEEALLHPF 355 (361)
T ss_dssp HHHHTCSCTTTSCCHHHHHTSGG
T ss_pred HHHHCcCChhHCcCHHHHhcCcc
Confidence 99999999999999999998843
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-51 Score=425.22 Aligned_cols=249 Identities=17% Similarity=0.137 Sum_probs=205.9
Q ss_pred CCcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCC---ccHHHHH---HHHHHHhcCCCCceeeeeeeeeeCCce
Q 011519 56 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW---PDARQFL---EEARAVGQLRNRRLANLLGCCCEGDER 128 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---~~~~~~~---~E~~~l~~l~hpniv~l~~~~~~~~~~ 128 (484)
.++|++++.||+|+||+||+|+ ..+|+.||||++++... .....+. .++.+++.++|||||+++++|.+.+.+
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 4678999999999999999999 46799999999964321 1122333 446777888999999999999999999
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC
Q 011519 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 208 (484)
Q Consensus 129 ~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~ 208 (484)
|||||||+||+|.++|. ..+.+++..+..++.||+.||.|||++ |||||||||+||||+.+|.+||+|||+|+....
T Consensus 268 ylVmEy~~GGdL~~~l~--~~~~l~E~~a~~y~~qIl~aL~yLH~~-gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~ 344 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLS--QHGVFSEADMRFYAAEIILGLEHMHNR-FVVYRDLKPANILLDEHGHVRISDLGLACDFSK 344 (689)
T ss_dssp EEEECCCCSCBHHHHHH--HHCCCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred EEEEecCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCchHHeEEeCCCCEEecccceeeecCC
Confidence 99999999999999997 346799999999999999999999999 999999999999999999999999999987654
Q ss_pred C--CcccCCCCCCCcccccC-CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHH
Q 011519 209 G--RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 285 (484)
Q Consensus 209 ~--~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 285 (484)
. .+.+||+.|||||++.+ ..|+.++|+|||||++|||+||..||.......... ....... ....+|..+++++
T Consensus 345 ~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~-i~~~i~~--~~~~~p~~~S~~a 421 (689)
T 3v5w_A 345 KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE-IDRMTLT--MAVELPDSFSPEL 421 (689)
T ss_dssp CCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHH-HHHHHHH--CCCCCCTTSCHHH
T ss_pred CCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHH-HHHhhcC--CCCCCCccCCHHH
Confidence 3 46789999999999975 579999999999999999999999997542211100 0000111 1123566778999
Q ss_pred HHHHHHHhccCCCCCCC-----hHHHHHHH
Q 011519 286 VRLASRCLQYEPRERPN-----PRSLVTAL 310 (484)
Q Consensus 286 ~~li~~cl~~dp~~Rps-----~~~il~~l 310 (484)
.+||.+||..||.+|++ +.+|++|-
T Consensus 422 ~dLI~~lL~~dP~~Rl~~~~~ga~ei~~Hp 451 (689)
T 3v5w_A 422 RSLLEGLLQRDVNRRLGCLGRGAQEVKESP 451 (689)
T ss_dssp HHHHHHHTCSCGGGCTTCSSSTHHHHTTSG
T ss_pred HHHHHHHccCCHhHCCCCCCCCHHHHhcCc
Confidence 99999999999999998 78999884
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-51 Score=426.51 Aligned_cols=251 Identities=19% Similarity=0.141 Sum_probs=213.3
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecC
Q 011519 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~ 135 (484)
++|++++.||+|+||+||+|. ..+|+.||||++........+.+.+|+.+|+.++|||||+++++|.+.+.++||||||
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~ 236 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM 236 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeec
Confidence 468899999999999999999 4679999999998766555677999999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCC--CCceeeccCCccccCCCC---
Q 011519 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD--VNPRLSCFGLMKNSRDGR--- 210 (484)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~--~~~kl~DfG~a~~~~~~~--- 210 (484)
+||+|.++|.. ..+.+++.++..++.||+.||.|||++ ||+||||||+|||++.+ +.+||+|||+++......
T Consensus 237 ~gg~L~~~i~~-~~~~l~e~~~~~~~~qi~~al~ylH~~-~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~~ 314 (573)
T 3uto_A 237 SGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHEN-NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK 314 (573)
T ss_dssp CCCBHHHHHTC-TTSCEEHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEEE
T ss_pred CCCcHHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeccCChhhccccCCCCCCEEEeeccceeEccCCCcee
Confidence 99999999964 345799999999999999999999999 99999999999999854 899999999999876543
Q ss_pred cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHH
Q 011519 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (484)
Q Consensus 211 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (484)
..+||+.|||||++.+..++.++|||||||++|||++|..||.+............... .........+++++.+||.
T Consensus 315 ~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~s~~~~dli~ 392 (573)
T 3uto_A 315 VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDW--NMDDSAFSGISEDGKDFIR 392 (573)
T ss_dssp EECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCC--CCCSGGGTTSCHHHHHHHH
T ss_pred eeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCC--CCCcccccCCCHHHHHHHH
Confidence 46799999999999999999999999999999999999999976543332221111110 0111122345788999999
Q ss_pred HHhccCCCCCCChHHHHHHHH
Q 011519 291 RCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~l~ 311 (484)
+||..||.+|||+.++++|-+
T Consensus 393 ~~L~~dp~~R~t~~e~l~Hpw 413 (573)
T 3uto_A 393 KLLLADPNTRMTIHQALEHPW 413 (573)
T ss_dssp TTSCSSGGGSCCHHHHHHSTT
T ss_pred HHccCChhHCcCHHHHhcCcC
Confidence 999999999999999999843
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-48 Score=379.05 Aligned_cols=259 Identities=24% Similarity=0.428 Sum_probs=220.2
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCC
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~ 136 (484)
..|++.+.||+|+||+||+|+..+++.||||++........+.+.+|+.+++.++||||+++++++.+.+..++||||++
T Consensus 39 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 118 (321)
T 2qkw_B 39 NNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYME 118 (321)
T ss_dssp CCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCT
T ss_pred hccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCC
Confidence 45567777899999999999988899999999987665667789999999999999999999999999999999999999
Q ss_pred CCCHHhhhccCC--CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-----
Q 011519 137 NDTLAKHLFHWE--TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----- 209 (484)
Q Consensus 137 ~gsL~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~----- 209 (484)
+|+|.+++.... ...+++..++.++.||+.||.|||+. |++||||||+|||++.++.+||+|||+++.....
T Consensus 119 ~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~-~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 197 (321)
T 2qkw_B 119 NGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR-AIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHL 197 (321)
T ss_dssp TCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCC
T ss_pred CCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC-CeecCCCCHHHEEECCCCCEEEeeccccccccccccccc
Confidence 999999996432 23589999999999999999999998 9999999999999999999999999999764322
Q ss_pred -CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhh-----------HHhhhccccccccccccCCC
Q 011519 210 -RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL-----------DLIRDRNIQTLTDSCLEGQF 277 (484)
Q Consensus 210 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~-----------~~~~~~~~~~~~~~~~~~~~ 277 (484)
....||+.|+|||++.+..++.++||||||+++|+|+||+.||..... ............++......
T Consensus 198 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (321)
T 2qkw_B 198 STVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKI 277 (321)
T ss_dssp BCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCS
T ss_pred ccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhcccc
Confidence 234578999999999988999999999999999999999988764311 11112223333444444556
Q ss_pred ChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhcC
Q 011519 278 SSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316 (484)
Q Consensus 278 ~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 316 (484)
+...+..+.+++.+||+.||++|||+.+++++|+.+.+.
T Consensus 278 ~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~ 316 (321)
T 2qkw_B 278 RPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316 (321)
T ss_dssp CHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence 778899999999999999999999999999999987654
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-48 Score=380.82 Aligned_cols=248 Identities=19% Similarity=0.289 Sum_probs=212.3
Q ss_pred CCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCC--ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEE
Q 011519 55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (484)
Q Consensus 55 ~f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 131 (484)
....|.+++.||+|+||+||+|.. .+|+.||||++..... ...+++.+|+.+|+.++||||+++++++...+..++|
T Consensus 13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 92 (328)
T 3fe3_A 13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLI 92 (328)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEE
Confidence 456789999999999999999995 6899999999975432 2356789999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC--
Q 011519 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 209 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~-- 209 (484)
|||++||+|.+++.. .+.+++..+..++.||+.||.|||+. ||+||||||+|||++.++.+||+|||++......
T Consensus 93 ~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~al~~lH~~-~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 169 (328)
T 3fe3_A 93 MEYASGGEVFDYLVA--HGRMKEKEARSKFRQIVSAVQYCHQK-RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK 169 (328)
T ss_dssp ECCCTTCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCG
T ss_pred EECCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CEeccCCCHHHEEEcCCCCEEEeeccCceecCCCCc
Confidence 999999999999963 45699999999999999999999999 9999999999999999999999999999865443
Q ss_pred -CcccCCCCCCCcccccCCCCC-CCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHH
Q 011519 210 -RSYSTNLAFTPPEYLRTGRVT-PESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287 (484)
Q Consensus 210 -~~~~~t~~y~aPE~~~~~~~~-~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (484)
....||+.|+|||++.+..++ .++|||||||++|+|+||+.||............... ....|...++++.+
T Consensus 170 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~~ 243 (328)
T 3fe3_A 170 LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRG------KYRIPFYMSTDCEN 243 (328)
T ss_dssp GGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHHH
T ss_pred cccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC------CCCCCCCCCHHHHH
Confidence 356789999999999987765 7999999999999999999998765443333222111 11234556788999
Q ss_pred HHHHHhccCCCCCCChHHHHHHHH
Q 011519 288 LASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 288 li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
|+.+||..||.+|||+.++++|-+
T Consensus 244 li~~~L~~dP~~R~t~~eil~h~~ 267 (328)
T 3fe3_A 244 LLKRFLVLNPIKRGTLEQIMKDRW 267 (328)
T ss_dssp HHHHHCCSSTTTSCCHHHHTTCTT
T ss_pred HHHHHCCCChhHCcCHHHHhcCHh
Confidence 999999999999999999999854
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-48 Score=374.59 Aligned_cols=258 Identities=19% Similarity=0.297 Sum_probs=208.3
Q ss_pred cCCCcccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCcc--HHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEE
Q 011519 54 SGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (484)
Q Consensus 54 ~~f~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 131 (484)
-.+.+|++++.||+|+||+||+|.. +++.||||++....... .+.+.+|+.++++++||||+++++++...+..++|
T Consensus 34 i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 3p86_A 34 IPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIV 112 (309)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEE
T ss_pred CChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEE
Confidence 3456889999999999999999987 57789999997654332 45789999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCC-CCCCCHHHHHHHHHHHHHHHHHhhcCCC--cccccccccceeecCCCCceeeccCCccccCC
Q 011519 132 AEYMPNDTLAKHLFHWE-TQPMKWAMRLRVALHIAEALEYCTSKER--ALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 208 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~lH~~~~--ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~ 208 (484)
|||+++|+|.+++.... ...+++..++.++.||+.||.|||+. | ++||||||+|||++.++.+||+|||+++....
T Consensus 113 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~ 191 (309)
T 3p86_A 113 TEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAS 191 (309)
T ss_dssp EECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS-SSCCCCTTCCGGGEEECTTCCEEECCCC-------
T ss_pred EecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC-CCCEECCCCChhhEEEeCCCcEEECCCCCCccccc
Confidence 99999999999997422 12389999999999999999999998 8 99999999999999999999999999976443
Q ss_pred C----CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHH
Q 011519 209 G----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTE 284 (484)
Q Consensus 209 ~----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (484)
. ....||+.|+|||++.+..++.++|||||||++|+|+||+.||............ .........+..+++.
T Consensus 192 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 267 (309)
T 3p86_A 192 TFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAV----GFKCKRLEIPRNLNPQ 267 (309)
T ss_dssp ----------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHH----HHSCCCCCCCTTSCHH
T ss_pred cccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH----HhcCCCCCCCccCCHH
Confidence 2 3467899999999999988999999999999999999999988654322221111 0011122345667789
Q ss_pred HHHHHHHHhccCCCCCCChHHHHHHHHhhhcCC
Q 011519 285 LVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (484)
Q Consensus 285 l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 317 (484)
+.+|+.+||+.||.+|||+.++++.|+.+.+..
T Consensus 268 l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~ 300 (309)
T 3p86_A 268 VAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA 300 (309)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC--
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999987653
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-48 Score=374.24 Aligned_cols=249 Identities=17% Similarity=0.238 Sum_probs=211.3
Q ss_pred CCcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEec
Q 011519 56 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey 134 (484)
...|++++.||+|+||+||+|. ..+++.||||++........+.+.+|+.+++.++||||+++++++...+..++||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 3578899999999999999999 567899999999766555677899999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----C
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----R 210 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~----~ 210 (484)
++||+|.+++.. ..+++..+..++.||+.||.|||+. ||+||||||+|||++.++.+||+|||++...... .
T Consensus 99 ~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 174 (297)
T 3fxz_A 99 LAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSN-QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS 174 (297)
T ss_dssp CTTCBHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBC
T ss_pred CCCCCHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhC-CceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccccC
Confidence 999999999963 3589999999999999999999999 9999999999999999999999999998765432 3
Q ss_pred cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHH
Q 011519 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (484)
Q Consensus 211 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (484)
...||+.|+|||++.+..++.++|||||||++|+|+||..||.............. ........+...+..+.+|+.
T Consensus 175 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~li~ 251 (297)
T 3fxz_A 175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIAT---NGTPELQNPEKLSAIFRDFLN 251 (297)
T ss_dssp CCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH---HCSCCCSCGGGSCHHHHHHHH
T ss_pred CccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh---CCCCCCCCccccCHHHHHHHH
Confidence 45789999999999999999999999999999999999998865422211111100 001111234556788999999
Q ss_pred HHhccCCCCCCChHHHHHHHH
Q 011519 291 RCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~l~ 311 (484)
+||+.||.+|||+.++++|-+
T Consensus 252 ~~l~~dp~~Rps~~ell~h~~ 272 (297)
T 3fxz_A 252 RCLEMDVEKRGSAKELLQHQF 272 (297)
T ss_dssp HHSCSSTTTSCCHHHHTTCGG
T ss_pred HHccCChhHCcCHHHHhhChh
Confidence 999999999999999998744
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-48 Score=376.00 Aligned_cols=255 Identities=19% Similarity=0.259 Sum_probs=213.7
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecC
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~ 135 (484)
.+|.+.+.||+|+||+||+|.. .+++.||||++........+.|.+|+.++++++||||+++++++.+.+..++||||+
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 89 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYI 89 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEec
Confidence 5678888999999999999995 568999999997665555778999999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCC-----
Q 011519 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR----- 210 (484)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~----- 210 (484)
++|+|.+++.. ....+++.+++.++.||+.||.|||+. |++||||||+|||++.++.+||+|||+++......
T Consensus 90 ~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~-~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 167 (310)
T 3s95_A 90 KGGTLRGIIKS-MDSQYPWSQRVSFAKDIASGMAYLHSM-NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEG 167 (310)
T ss_dssp TTCBHHHHHHH-CCTTSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSTTSEEECTTSCEEECCCTTCEECC--------
T ss_pred CCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCCcCeEEECCCCCEEEeecccceecccccccccc
Confidence 99999999975 345699999999999999999999999 99999999999999999999999999998654321
Q ss_pred -------------cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCC
Q 011519 211 -------------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQF 277 (484)
Q Consensus 211 -------------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (484)
...||+.|+|||++.+..++.++||||||+++|+|++|..|+......... .............
T Consensus 168 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~---~~~~~~~~~~~~~ 244 (310)
T 3s95_A 168 LRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMD---FGLNVRGFLDRYC 244 (310)
T ss_dssp ------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTT---SSBCHHHHHHHTC
T ss_pred cccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHH---HhhhhhccccccC
Confidence 456899999999999999999999999999999999999877543211100 0000111111123
Q ss_pred ChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhcC
Q 011519 278 SSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316 (484)
Q Consensus 278 ~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 316 (484)
+..+++.+.+|+.+||+.||++|||+.++++.|+.+...
T Consensus 245 ~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~ 283 (310)
T 3s95_A 245 PPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMH 283 (310)
T ss_dssp CTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 445567899999999999999999999999999988764
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-47 Score=370.94 Aligned_cols=265 Identities=16% Similarity=0.194 Sum_probs=219.9
Q ss_pred cccCHHHHHHHhcCCCc-------ccccccCCCCCCceEEEEEeC-CCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCC
Q 011519 42 CEYSIETLRTATSGFAM-------ENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNR 113 (484)
Q Consensus 42 ~~~~~~~~~~~~~~f~~-------~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hp 113 (484)
..++.+++..+++.... ++....||+|+||.||+|+.. +|+.||||++........+.+.+|+.+++.++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 45888999988876432 455567899999999999954 7999999999876656677899999999999999
Q ss_pred ceeeeeeeeeeCCceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCC
Q 011519 114 RLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV 193 (484)
Q Consensus 114 niv~l~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~ 193 (484)
||+++++++...+..++||||+++|+|.+++. ...+++..+..++.||+.||.|||+. |++||||||+|||++.++
T Consensus 103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~---~~~l~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dlkp~NIll~~~~ 178 (321)
T 2c30_A 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVS---QVRLNEEQIATVCEAVLQALAYLHAQ-GVIHRDIKSDSILLTLDG 178 (321)
T ss_dssp TBCCEEEEEEETTEEEEEECCCCSCBHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTC
T ss_pred CcceEEEEEEECCEEEEEEecCCCCCHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEECCCC
Confidence 99999999999999999999999999999984 35699999999999999999999999 999999999999999999
Q ss_pred CceeeccCCccccCCC----CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccc
Q 011519 194 NPRLSCFGLMKNSRDG----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLT 269 (484)
Q Consensus 194 ~~kl~DfG~a~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~ 269 (484)
.+||+|||++...... ....||+.|+|||++.+..++.++||||||+++|+|++|+.||............... .
T Consensus 179 ~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~-~ 257 (321)
T 2c30_A 179 RVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDS-P 257 (321)
T ss_dssp CEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS-S
T ss_pred cEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC-C
Confidence 9999999998765432 3457899999999999888999999999999999999999988654322211111110 1
Q ss_pred cccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhh
Q 011519 270 DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL 313 (484)
Q Consensus 270 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~ 313 (484)
.+. ...+...++.+.+|+.+||+.||++|||+.+++++.+-.
T Consensus 258 ~~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~ 299 (321)
T 2c30_A 258 PPK--LKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLL 299 (321)
T ss_dssp CCC--CTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGG
T ss_pred CCC--cCccccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhc
Confidence 110 112234567899999999999999999999999986543
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-48 Score=374.56 Aligned_cols=273 Identities=28% Similarity=0.477 Sum_probs=225.3
Q ss_pred CCcccccCHHHHHHHhcCCCcccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCcee
Q 011519 38 VPVFCEYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLA 116 (484)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~f~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv 116 (484)
......|++.++...+++| .+.+.||+|+||+||+|...+++.||||++...... ....+.+|+.+++.++||||+
T Consensus 14 ~~~~~~~~~~~~~~~~~~y---~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv 90 (326)
T 3uim_A 14 LGQLKRFSLRELQVASDNF---SNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLL 90 (326)
T ss_dssp -CCCEECCTHHHHTTTTSS---CSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBC
T ss_pred cCccceecHHHHHHHhhcc---ccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCcc
Confidence 3445678999988877766 455666999999999999878999999999765432 234689999999999999999
Q ss_pred eeeeeeeeCCceEEEEecCCCCCHHhhhccCC--CCCCCHHHHHHHHHHHHHHHHHhhcCC--CcccccccccceeecCC
Q 011519 117 NLLGCCCEGDERLLVAEYMPNDTLAKHLFHWE--TQPMKWAMRLRVALHIAEALEYCTSKE--RALYHDLNAYRIVFDDD 192 (484)
Q Consensus 117 ~l~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~lH~~~--~ivH~Dlkp~Nill~~~ 192 (484)
++++++...+..++||||+++|+|.+++.... ...+++..+..++.||+.||.|||+.. |++||||||+|||++.+
T Consensus 91 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~ 170 (326)
T 3uim_A 91 RLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEE 170 (326)
T ss_dssp CCCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTT
T ss_pred ceEEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCC
Confidence 99999999999999999999999999997533 335999999999999999999999963 89999999999999999
Q ss_pred CCceeeccCCccccCCC-----CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhH---------
Q 011519 193 VNPRLSCFGLMKNSRDG-----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALD--------- 258 (484)
Q Consensus 193 ~~~kl~DfG~a~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~--------- 258 (484)
+.+||+|||++...... ....||+.|+|||++.+..++.++||||||+++|+|+||..||......
T Consensus 171 ~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~ 250 (326)
T 3uim_A 171 FEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLD 250 (326)
T ss_dssp CCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHH
T ss_pred CCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHH
Confidence 99999999999865432 2345899999999998888999999999999999999999988532111
Q ss_pred ----HhhhccccccccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhh
Q 011519 259 ----LIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL 313 (484)
Q Consensus 259 ----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~ 313 (484)
.........+.+......++...+..+.+++.+||+.||.+|||+.+++++|+..
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~ 309 (326)
T 3uim_A 251 WVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309 (326)
T ss_dssp HHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred HHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence 0112223333344444566778889999999999999999999999999999864
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-47 Score=374.75 Aligned_cols=247 Identities=17% Similarity=0.218 Sum_probs=210.7
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCC---CccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEE
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 131 (484)
..+|++++.||+|+||+||+|+. .+|+.||||+++... ......+.+|+.+|+.++||||+++++++...+..++|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 45788899999999999999995 578999999996531 22356789999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC---
Q 011519 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD--- 208 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~--- 208 (484)
|||++||+|.+++. ..+.+++..+..++.||+.||.|||+. ||+||||||+|||++.+|.+||+|||+++....
T Consensus 84 ~E~~~gg~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~ 160 (337)
T 1o6l_A 84 MEYANGGELFFHLS--RERVFTEERARFYGAEIVSALEYLHSR-DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA 160 (337)
T ss_dssp EECCTTCBHHHHHH--HHSCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTC
T ss_pred EeCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCcCCHHHEEECCCCCEEEeeccchhhcccCCC
Confidence 99999999999996 345799999999999999999999999 999999999999999999999999999986332
Q ss_pred -CCcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHH
Q 011519 209 -GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287 (484)
Q Consensus 209 -~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (484)
.....||+.|+|||++.+..++.++|||||||++|||++|..||............... ...++...++++.+
T Consensus 161 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~~ 234 (337)
T 1o6l_A 161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME------EIRFPRTLSPEAKS 234 (337)
T ss_dssp CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHHH
T ss_pred cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHH
Confidence 23567899999999999989999999999999999999999998765333222211111 11345566789999
Q ss_pred HHHHHhccCCCCCC-----ChHHHHHHHH
Q 011519 288 LASRCLQYEPRERP-----NPRSLVTALV 311 (484)
Q Consensus 288 li~~cl~~dp~~Rp-----s~~~il~~l~ 311 (484)
||.+||+.||.+|| ++.++++|-+
T Consensus 235 li~~lL~~dP~~R~g~~~~~~~ei~~h~~ 263 (337)
T 1o6l_A 235 LLAGLLKKDPKQRLGGGPSDAKEVMEHRF 263 (337)
T ss_dssp HHHHHTCSSTTTSTTCSTTTHHHHHTSGG
T ss_pred HHHHHhhcCHHHhcCCCCCCHHHHHcCCC
Confidence 99999999999999 8999998843
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-47 Score=372.62 Aligned_cols=255 Identities=20% Similarity=0.284 Sum_probs=211.7
Q ss_pred CcccccccCCCCCCceEEEEEeC----CCcEEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLE----NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 131 (484)
.+|++++.||+|+||+||+|... .+..||||+++..... ..+.|.+|+.+++.++||||+++++++.+.+..++|
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 128 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV 128 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEE
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEE
Confidence 46788899999999999999953 3456999999865333 356799999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCC-
Q 011519 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR- 210 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~- 210 (484)
|||+++|+|.+++.. ....+++..++.++.||+.||.|||+. ||+||||||+|||++.++.+||+|||+++......
T Consensus 129 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 206 (325)
T 3kul_A 129 TEYMENGSLDTFLRT-HDGQFTIMQLVGMLRGVGAGMRYLSDL-GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPD 206 (325)
T ss_dssp EECCTTCBHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCCSSCEECC----
T ss_pred eeCCCCCcHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHC-CeeCCCCCcceEEECCCCCEEECCCCcccccccCcc
Confidence 999999999999964 345799999999999999999999999 99999999999999999999999999998764431
Q ss_pred ------cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHH
Q 011519 211 ------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283 (484)
Q Consensus 211 ------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (484)
...+|+.|+|||++.+..++.++||||||+++|+|++ |..||............... .....+..++.
T Consensus 207 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 281 (325)
T 3kul_A 207 AAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEG-----YRLPAPMGCPH 281 (325)
T ss_dssp CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTT-----CCCCCCTTCCH
T ss_pred ceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcC-----CCCCCCCCcCH
Confidence 2334678999999998889999999999999999999 88887654333222211111 12223455678
Q ss_pred HHHHHHHHHhccCCCCCCChHHHHHHHHhhhcCCC
Q 011519 284 ELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 318 (484)
Q Consensus 284 ~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~ 318 (484)
.+.+|+..||..||.+|||+.++++.|+.+.....
T Consensus 282 ~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~ 316 (325)
T 3kul_A 282 ALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPE 316 (325)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCcc
Confidence 99999999999999999999999999999877643
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-47 Score=365.68 Aligned_cols=257 Identities=17% Similarity=0.247 Sum_probs=210.5
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCc---cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEE
Q 011519 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 132 (484)
.+|++++.||+|+||+||+|. ..+++.||||++...... ..+.+.+|+.++.+++||||+++++++...+..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 90 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM 90 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEE
Confidence 468899999999999999999 457899999998654332 2467899999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC---
Q 011519 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--- 209 (484)
Q Consensus 133 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~--- 209 (484)
||++||+|.+++.. .+++++..++.++.||+.||.|||+. |++||||||+|||++.++.+||+|||++......
T Consensus 91 e~~~g~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 167 (294)
T 4eqm_A 91 EYIEGPTLSEYIES--HGPLSVDTAINFTNQILDGIKHAHDM-RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLT 167 (294)
T ss_dssp ECCCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTSCEEECCCSSSTTC------
T ss_pred eCCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCCCEEEEeCCCcccccccccc
Confidence 99999999999973 45799999999999999999999999 9999999999999999999999999999865432
Q ss_pred --CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHH
Q 011519 210 --RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287 (484)
Q Consensus 210 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (484)
....||+.|+|||++.+..++.++||||||+++|+|+||+.||................... .....+...++.+.+
T Consensus 168 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~ 246 (294)
T 4eqm_A 168 QTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPN-VTTDVRKDIPQSLSN 246 (294)
T ss_dssp -------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCC-HHHHSCTTSCHHHHH
T ss_pred ccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCC-cchhcccCCCHHHHH
Confidence 23568999999999999899999999999999999999999987654332221111111111 111223445688999
Q ss_pred HHHHHhccCCCCCC-ChHHHHHHHHhhhcCC
Q 011519 288 LASRCLQYEPRERP-NPRSLVTALVTLQKDT 317 (484)
Q Consensus 288 li~~cl~~dp~~Rp-s~~~il~~l~~~~~~~ 317 (484)
++.+||+.||.+|| +++++.+.|..+....
T Consensus 247 li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~ 277 (294)
T 4eqm_A 247 VILRATEKDKANRYKTIQEMKDDLSSVLHEN 277 (294)
T ss_dssp HHHHHSCSSGGGSCSSHHHHHHHHHTSSSSS
T ss_pred HHHHHhcCCHhHccccHHHHHHHHHHHHhhc
Confidence 99999999999998 8999999998876544
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-47 Score=360.57 Aligned_cols=253 Identities=21% Similarity=0.307 Sum_probs=214.5
Q ss_pred CCcccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecC
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~ 135 (484)
.++|++++.||+|+||+||+|...+++.||||++.... ...+++.+|+.++++++||||+++++++.+.+..++||||+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 87 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeC
Confidence 35788999999999999999998888899999998654 34567999999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-----C
Q 011519 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----R 210 (484)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~-----~ 210 (484)
++|+|.+++.. ....+++..++.++.|++.||.|||+. |++||||||+||+++.++.+||+|||++...... .
T Consensus 88 ~~~~L~~~l~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~-~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 165 (269)
T 4hcu_A 88 EHGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEA-CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 165 (269)
T ss_dssp TTCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTT
T ss_pred CCCcHHHHHHh-cCcccCHHHHHHHHHHHHHHHHHHHhC-CeecCCcchheEEEcCCCCEEecccccccccccccccccc
Confidence 99999999964 345699999999999999999999999 9999999999999999999999999999865432 3
Q ss_pred cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHH
Q 011519 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289 (484)
Q Consensus 211 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 289 (484)
...+|+.|+|||++.+..++.++||||||+++|+|++ |..||............... .....+...++.+.+++
T Consensus 166 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li 240 (269)
T 4hcu_A 166 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG-----FRLYKPRLASTHVYQIM 240 (269)
T ss_dssp STTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTT-----CCCCCCTTSCHHHHHHH
T ss_pred CcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcC-----ccCCCCCcCCHHHHHHH
Confidence 3456778999999998889999999999999999999 88777654333222111111 11223444568899999
Q ss_pred HHHhccCCCCCCChHHHHHHHHhhhcC
Q 011519 290 SRCLQYEPRERPNPRSLVTALVTLQKD 316 (484)
Q Consensus 290 ~~cl~~dp~~Rps~~~il~~l~~~~~~ 316 (484)
.+||+.||.+|||+.+++++|+.+.+.
T Consensus 241 ~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 241 NHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 999999999999999999999988653
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-47 Score=376.37 Aligned_cols=253 Identities=19% Similarity=0.311 Sum_probs=211.2
Q ss_pred CcccccccCCCCCCceEEEEEe--------CCCcEEEEEEecCCCCc-cHHHHHHHHHHHhcC-CCCceeeeeeeeeeCC
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL--------ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQL-RNRRLANLLGCCCEGD 126 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~ 126 (484)
..|.+.+.||+|+||+||+|.. .++..||||+++..... ..+.+.+|+.+++.+ +||||+++++++...+
T Consensus 81 ~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~ 160 (370)
T 2psq_A 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 160 (370)
T ss_dssp GGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSS
T ss_pred HHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCC
Confidence 5678889999999999999984 23567999999765432 356799999999999 8999999999999999
Q ss_pred ceEEEEecCCCCCHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCC
Q 011519 127 ERLLVAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 192 (484)
Q Consensus 127 ~~~lv~Ey~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~ 192 (484)
..++||||+++|+|.+++.... ...+++..++.++.||+.||.|||+. ||+||||||+|||++.+
T Consensus 161 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~ 239 (370)
T 2psq_A 161 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTEN 239 (370)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECTT
T ss_pred CEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC-CeeccccchhhEEECCC
Confidence 9999999999999999997532 23589999999999999999999999 99999999999999999
Q ss_pred CCceeeccCCccccCCC------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccc
Q 011519 193 VNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNI 265 (484)
Q Consensus 193 ~~~kl~DfG~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~ 265 (484)
+.+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|||+| |..||...........
T Consensus 240 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~~-- 317 (370)
T 2psq_A 240 NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL-- 317 (370)
T ss_dssp CCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHH--
T ss_pred CCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH--
Confidence 99999999999865432 23455788999999999899999999999999999999 8888765432222111
Q ss_pred cccccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhc
Q 011519 266 QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 315 (484)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~ 315 (484)
.........+..++..+.+|+.+||+.||.+|||+.+++++|+.+..
T Consensus 318 ---~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~ 364 (370)
T 2psq_A 318 ---LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 364 (370)
T ss_dssp ---HHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---HhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 11111223455667899999999999999999999999999998754
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-47 Score=379.60 Aligned_cols=254 Identities=22% Similarity=0.287 Sum_probs=201.9
Q ss_pred CcccccccCCCCCCceEEEEEeC----CCcEEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLE----NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 131 (484)
..|.+.+.||+|+||+||+|+.. ++..||||+++..... ..+.|.+|+.++++++||||+++++++...+..++|
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 124 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEE
Confidence 35778888999999999999853 5778999999765332 356799999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCC-
Q 011519 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR- 210 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~- 210 (484)
|||+++|+|.+++.. ....+++.+++.++.||+.||.|||+. ||+||||||+|||++.++.+||+|||+++......
T Consensus 125 ~e~~~~~sL~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 202 (373)
T 2qol_A 125 TEYMENGSLDSFLRK-HDAQFTVIQLVGMLRGIASGMKYLSDM-GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPE 202 (373)
T ss_dssp EECCTTCBHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTCCEEECCC-----------
T ss_pred EeCCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeCCCCCcceEEEcCCCCEEECcCccccccccCCc
Confidence 999999999999964 345699999999999999999999999 99999999999999999999999999998754321
Q ss_pred ------cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHH
Q 011519 211 ------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283 (484)
Q Consensus 211 ------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (484)
...+++.|+|||++.+..++.++||||||+++|||++ |+.||............. .......+..++.
T Consensus 203 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~-----~~~~~~~~~~~~~ 277 (373)
T 2qol_A 203 AAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD-----EGYRLPPPMDCPA 277 (373)
T ss_dssp -----------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHH-----TTEECCCCTTCBH
T ss_pred cceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-----cCCCCCCCccccH
Confidence 1234678999999998899999999999999999998 888876543222211111 1111223445678
Q ss_pred HHHHHHHHHhccCCCCCCChHHHHHHHHhhhcCC
Q 011519 284 ELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (484)
Q Consensus 284 ~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 317 (484)
.+.+|+.+||+.||.+|||+.++++.|+.+....
T Consensus 278 ~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~ 311 (373)
T 2qol_A 278 ALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311 (373)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCG
T ss_pred HHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCc
Confidence 8999999999999999999999999999987654
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-47 Score=375.59 Aligned_cols=250 Identities=18% Similarity=0.187 Sum_probs=208.6
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCc------cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP------DARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 129 (484)
+.|++++.||+|+||+||+|.. .+|+.||||+++..... ..+.+.+|+.+|+.++||||+++++++.+.+..+
T Consensus 12 ~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 91 (361)
T 2yab_A 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVV 91 (361)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred hceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEE
Confidence 3578889999999999999995 57899999999764322 2467999999999999999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCC----CceeeccCCccc
Q 011519 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV----NPRLSCFGLMKN 205 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~----~~kl~DfG~a~~ 205 (484)
+||||++||+|.+++. ..+.+++..+..++.||+.||.|||+. ||+||||||+|||++.++ .+||+|||++..
T Consensus 92 lv~e~~~gg~L~~~l~--~~~~l~~~~~~~i~~qi~~aL~~LH~~-givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~ 168 (361)
T 2yab_A 92 LILELVSGGELFDFLA--QKESLSEEEATSFIKQILDGVNYLHTK-KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168 (361)
T ss_dssp EEEECCCSCBHHHHHT--TCSCCBHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEESCTTSSSCCEEECCCSSCEE
T ss_pred EEEEcCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEEeCCCCCccCEEEEecCCceE
Confidence 9999999999999996 456799999999999999999999999 999999999999998776 799999999987
Q ss_pred cCCC---CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHH
Q 011519 206 SRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG 282 (484)
Q Consensus 206 ~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (484)
.... ....||+.|+|||++.+..++.++|||||||++|+|++|..||.................. ....+....+
T Consensus 169 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~s 246 (361)
T 2yab_A 169 IEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYD--FDEEFFSQTS 246 (361)
T ss_dssp CCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCC--CCHHHHTTSC
T ss_pred cCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC--CCchhccCCC
Confidence 6543 4567899999999999889999999999999999999999998765333222111111000 0000112346
Q ss_pred HHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 283 TELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 283 ~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
+.+.+||.+||..||.+|||+.++++|-+
T Consensus 247 ~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 275 (361)
T 2yab_A 247 ELAKDFIRKLLVKETRKRLTIQEALRHPW 275 (361)
T ss_dssp HHHHHHHHHHSCSSTTTSCCHHHHHTSTT
T ss_pred HHHHHHHHHHCCCChhHCcCHHHHhcCcC
Confidence 78999999999999999999999998743
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-47 Score=367.70 Aligned_cols=247 Identities=17% Similarity=0.203 Sum_probs=211.3
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCC---CccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEE
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 131 (484)
..+|++++.||+|+||+||+|+. .+|+.||||+++... ....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 46788999999999999999995 578999999996532 12356788999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-C
Q 011519 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-R 210 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~-~ 210 (484)
|||++||+|.+++.. .+.+++..+..++.||+.||.|||+. ||+||||||+|||++.+|.+||+|||+++..... .
T Consensus 85 ~e~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~~ 161 (318)
T 1fot_A 85 MDYIEGGELFSLLRK--SQRFPNPVAKFYAAEVCLALEYLHSK-DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTY 161 (318)
T ss_dssp ECCCCSCBHHHHHHH--TSSCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBC
T ss_pred EeCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCChheEEEcCCCCEEEeecCcceecCCccc
Confidence 999999999999973 45699999999999999999999999 9999999999999999999999999999876543 4
Q ss_pred cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHH
Q 011519 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (484)
Q Consensus 211 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (484)
...||+.|+|||++.+..++.++|||||||++|||++|..||............... ...++...++++.+|+.
T Consensus 162 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~li~ 235 (318)
T 1fot_A 162 TLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNA------ELRFPPFFNEDVKDLLS 235 (318)
T ss_dssp CCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHC------CCCCCTTSCHHHHHHHH
T ss_pred cccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC------CCCCCCCCCHHHHHHHH
Confidence 567999999999999989999999999999999999999998754332222111111 11345566789999999
Q ss_pred HHhccCCCCCC-----ChHHHHHHHH
Q 011519 291 RCLQYEPRERP-----NPRSLVTALV 311 (484)
Q Consensus 291 ~cl~~dp~~Rp-----s~~~il~~l~ 311 (484)
+||..||.+|| +++++++|-+
T Consensus 236 ~lL~~dp~~R~~~~~~~~~~i~~hp~ 261 (318)
T 1fot_A 236 RLITRDLSQRLGNLQNGTEDVKNHPW 261 (318)
T ss_dssp HHTCSCTTTCTTSSTTTTHHHHTSGG
T ss_pred HHhccCHHHcCCCcCCCHHHHhcCcc
Confidence 99999999999 8999998843
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-47 Score=358.28 Aligned_cols=252 Identities=20% Similarity=0.321 Sum_probs=212.2
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCC
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~ 136 (484)
.+|++++.||+|+||+||+|...++..||||+++.... ..+.+.+|+.++.+++||||+++++++...+..++||||++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 86 (268)
T 3sxs_A 8 EEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYIS 86 (268)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred hheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccC
Confidence 57888999999999999999988888999999976543 35679999999999999999999999999999999999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCC-----c
Q 011519 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-----S 211 (484)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~-----~ 211 (484)
+++|.+++.. .+..+++..++.++.||+.||.|||+. |++||||||+|||++.++.+||+|||++....... .
T Consensus 87 ~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~ 164 (268)
T 3sxs_A 87 NGCLLNYLRS-HGKGLEPSQLLEMCYDVCEGMAFLESH-QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVG 164 (268)
T ss_dssp TCBHHHHHHH-HGGGCCHHHHHHHHHHHHHHHHHHHHT-TEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCS
T ss_pred CCcHHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCcCcceEEECCCCCEEEccCccceecchhhhhcccC
Confidence 9999999964 234599999999999999999999999 99999999999999999999999999998654432 2
Q ss_pred ccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHH
Q 011519 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (484)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (484)
..+|+.|+|||++.+..++.++||||||+++|+|+| |..||............... .....+...++.+.+++.
T Consensus 165 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li~ 239 (268)
T 3sxs_A 165 TKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQG-----HRLYRPHLASDTIYQIMY 239 (268)
T ss_dssp CCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTT-----CCCCCCTTSCHHHHHHHH
T ss_pred CCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcC-----CCCCCCCcChHHHHHHHH
Confidence 345677999999998889999999999999999999 88887644322221111111 111223445678999999
Q ss_pred HHhccCCCCCCChHHHHHHHHhhhcC
Q 011519 291 RCLQYEPRERPNPRSLVTALVTLQKD 316 (484)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~l~~~~~~ 316 (484)
.||+.||.+|||+.+++++|+.+.+.
T Consensus 240 ~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 240 SCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp HTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred HHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 99999999999999999999998764
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-47 Score=357.87 Aligned_cols=254 Identities=20% Similarity=0.309 Sum_probs=212.5
Q ss_pred CCCcccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCc--cHHHHHHHHHHHhcCCCCceeeeeeeeeeC--CceEE
Q 011519 55 GFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEG--DERLL 130 (484)
Q Consensus 55 ~f~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~--~~~~l 130 (484)
.+.+|++++.||+|+||+||+|+.. ++.||||+++..... ..+.|.+|+.++++++||||+++++++.+. +..++
T Consensus 8 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 86 (271)
T 3kmu_A 8 DFKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTL 86 (271)
T ss_dssp CGGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEE
T ss_pred CHHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEe
Confidence 4568889999999999999999984 788999999765432 355799999999999999999999999877 78899
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC--cccccccccceeecCCCCceeeccCCccccCC
Q 011519 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKER--ALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 208 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~--ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~ 208 (484)
||||+++|+|.+++.......+++..++.++.||+.||.|||+. + ++||||||+|||++.++.++|+|||++.....
T Consensus 87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~ 165 (271)
T 3kmu_A 87 ITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL-EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS 165 (271)
T ss_dssp EEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTS-SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC
T ss_pred eecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC-CCceecCCCccceEEEcCCcceeEEeccceeeecc
Confidence 99999999999999865555799999999999999999999998 8 99999999999999999999999988765333
Q ss_pred CCcccCCCCCCCcccccCCCCCC---CCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHH
Q 011519 209 GRSYSTNLAFTPPEYLRTGRVTP---ESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 285 (484)
Q Consensus 209 ~~~~~~t~~y~aPE~~~~~~~~~---~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 285 (484)
....+|+.|+|||++.+...+. ++||||||+++|+|+||+.||............. ........+..+++.+
T Consensus 166 -~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 240 (271)
T 3kmu_A 166 -PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVA----LEGLRPTIPPGISPHV 240 (271)
T ss_dssp -TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHH----HSCCCCCCCTTCCHHH
T ss_pred -cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHH----hcCCCCCCCCCCCHHH
Confidence 3457899999999998766544 7999999999999999999886543322211111 1112223455667899
Q ss_pred HHHHHHHhccCCCCCCChHHHHHHHHhhhc
Q 011519 286 VRLASRCLQYEPRERPNPRSLVTALVTLQK 315 (484)
Q Consensus 286 ~~li~~cl~~dp~~Rps~~~il~~l~~~~~ 315 (484)
.+++..||+.||++|||+.++++.|+.+.+
T Consensus 241 ~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 241 SKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred HHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 999999999999999999999999998764
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-47 Score=366.44 Aligned_cols=258 Identities=19% Similarity=0.293 Sum_probs=210.5
Q ss_pred CcccccccCCCCCCceEEEEEe-----CCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeC--CceE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEG--DERL 129 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~--~~~~ 129 (484)
.+|++++.||+|+||+||+|+. .+++.||||++........+.+.+|+.++++++||||+++++++... ...+
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 89 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCE
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceE
Confidence 5788999999999999999983 36889999999876555567899999999999999999999998653 5589
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC
Q 011519 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 209 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 209 (484)
+||||+++|+|.+++... ...+++..++.++.||+.||.|||+. |++||||||+|||++.++.+||+|||++......
T Consensus 90 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 167 (295)
T 3ugc_A 90 LIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQD 167 (295)
T ss_dssp EEEECCTTCBHHHHHHHC-GGGCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEEETTEEEECCCCSCC-----
T ss_pred EEEEeCCCCCHHHHHHhc-ccccCHHHHHHHHHHHHHHHHHHhcC-CcccCCCCHhhEEEcCCCeEEEccCcccccccCC
Confidence 999999999999999753 34599999999999999999999998 9999999999999999999999999999875432
Q ss_pred -------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhc-----------cccccccc
Q 011519 210 -------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR-----------NIQTLTDS 271 (484)
Q Consensus 210 -------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~-----------~~~~~~~~ 271 (484)
....+++.|+|||++.+..++.++||||||+++|+|+||..|+........... ........
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (295)
T 3ugc_A 168 KEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKN 247 (295)
T ss_dssp --------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHT
T ss_pred cceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhc
Confidence 223456779999999988999999999999999999999988765432221100 00111111
Q ss_pred cccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhcC
Q 011519 272 CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316 (484)
Q Consensus 272 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 316 (484)
......+..+++++.+|+.+||+.||++|||+.++++.|+.+...
T Consensus 248 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~ 292 (295)
T 3ugc_A 248 NGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 292 (295)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred cCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence 112234566778999999999999999999999999999998765
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-47 Score=369.30 Aligned_cols=252 Identities=15% Similarity=0.167 Sum_probs=210.3
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEec
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey 134 (484)
+..|.+++.||+|+||+||+|.. .+++.||+|++.... .....+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 46788999999999999999995 568899999997543 3456788999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecC--CCCceeeccCCccccCCCC--
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD--DVNPRLSCFGLMKNSRDGR-- 210 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~--~~~~kl~DfG~a~~~~~~~-- 210 (484)
++||+|.+++.. ....+++..++.++.||+.||.|||+. ||+||||||+|||++. ++.+||+|||++.......
T Consensus 83 ~~g~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~-givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~ 160 (321)
T 1tki_A 83 ISGLDIFERINT-SAFELNEREIVSYVHQVCEALQFLHSH-NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF 160 (321)
T ss_dssp CCCCBHHHHHTS-SSCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEE
T ss_pred CCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCcc
Confidence 999999999963 334699999999999999999999999 9999999999999987 7899999999998765543
Q ss_pred -cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHH
Q 011519 211 -SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289 (484)
Q Consensus 211 -~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 289 (484)
...||+.|+|||++.+..++.++|||||||++|+|++|..||................... ........+.++.+|+
T Consensus 161 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~--~~~~~~~~s~~~~~li 238 (321)
T 1tki_A 161 RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTF--DEEAFKEISIEAMDFV 238 (321)
T ss_dssp EEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCC--CHHHHTTSCHHHHHHH
T ss_pred ccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCC--ChhhhccCCHHHHHHH
Confidence 3568999999999998889999999999999999999999987654332222111111100 0000123467899999
Q ss_pred HHHhccCCCCCCChHHHHHHHHh
Q 011519 290 SRCLQYEPRERPNPRSLVTALVT 312 (484)
Q Consensus 290 ~~cl~~dp~~Rps~~~il~~l~~ 312 (484)
.+||..||.+|||+.++++|-+-
T Consensus 239 ~~~L~~dp~~Rpt~~e~l~hp~~ 261 (321)
T 1tki_A 239 DRLLVKERKSRMTASEALQHPWL 261 (321)
T ss_dssp HTTSCSSGGGSCCHHHHHHSHHH
T ss_pred HHHcCCChhHCcCHHHHhcChhh
Confidence 99999999999999999998654
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-46 Score=359.68 Aligned_cols=272 Identities=28% Similarity=0.470 Sum_probs=222.8
Q ss_pred cccccCHHHHHHHhcCCCcccc---cccCCCCCCceEEEEEeCCCcEEEEEEecCCC----CccHHHHHHHHHHHhcCCC
Q 011519 40 VFCEYSIETLRTATSGFAMENI---VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLRN 112 (484)
Q Consensus 40 ~~~~~~~~~~~~~~~~f~~~~~---~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h 112 (484)
.+..|++.++..++++|+...+ .+.||+|+||+||+|.. +++.||||++.... ....+.+.+|+.+++.++|
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 89 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH 89 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence 4677999999999999976522 36679999999999987 57799999987532 1235679999999999999
Q ss_pred CceeeeeeeeeeCCceEEEEecCCCCCHHhhhccC-CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecC
Q 011519 113 RRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHW-ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191 (484)
Q Consensus 113 pniv~l~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~ 191 (484)
|||+++++++.+.+..++||||+++|+|.+++... ...++++..++.++.||+.||.|||+. |++||||||+|||++.
T Consensus 90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~-~i~H~dlkp~Nili~~ 168 (307)
T 2nru_A 90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN-HHIHRDIKSANILLDE 168 (307)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECT
T ss_pred CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC-CeecCCCCHHHEEEcC
Confidence 99999999999999999999999999999999642 235699999999999999999999999 9999999999999999
Q ss_pred CCCceeeccCCccccCCC------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHH----hh
Q 011519 192 DVNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDL----IR 261 (484)
Q Consensus 192 ~~~~kl~DfG~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~----~~ 261 (484)
++.+||+|||++...... ....||+.|+|||.+.+ .++.++||||||+++|+|+||..||....... +.
T Consensus 169 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~ 247 (307)
T 2nru_A 169 AFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIK 247 (307)
T ss_dssp TCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHH
T ss_pred CCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHH
Confidence 999999999998865432 23568999999999874 58899999999999999999998876432110 00
Q ss_pred h------ccccccccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhc
Q 011519 262 D------RNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 315 (484)
Q Consensus 262 ~------~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~ 315 (484)
. ..+....+.. ....+...+..+.+++.+||+.||.+|||+.+++++|+.+..
T Consensus 248 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 248 EEIEDEEKTIEDYIDKK-MNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp HHHHTTSCCHHHHSCSS-CSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred HHhhhhhhhhhhhcccc-ccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 0 0011111111 123456778899999999999999999999999999998753
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-47 Score=376.20 Aligned_cols=247 Identities=18% Similarity=0.240 Sum_probs=206.2
Q ss_pred CCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCC---CccHHHHHHHHHHHhcC-CCCceeeeeeeeeeCCceE
Q 011519 55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL 129 (484)
Q Consensus 55 ~f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~ 129 (484)
...+|++++.||+|+||+||+|+. .+++.||||+++... ....+.+.+|..++..+ +||||+++++++.+.+..+
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 100 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF 100 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence 356789999999999999999994 568999999997532 12345688999999988 6999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC-
Q 011519 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD- 208 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~- 208 (484)
+||||++||+|.+++.. .+.+++..+..++.||+.||.|||+. ||+||||||+|||++.++.+||+|||+++....
T Consensus 101 lv~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~-givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~ 177 (353)
T 3txo_A 101 FVMEFVNGGDLMFHIQK--SRRFDEARARFYAAEIISALMFLHDK-GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICN 177 (353)
T ss_dssp EEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC-
T ss_pred EEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CCcccCCCHHHEEECCCCCEEEccccceeecccC
Confidence 99999999999999973 45699999999999999999999999 999999999999999999999999999986432
Q ss_pred ---CCcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHH
Q 011519 209 ---GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 285 (484)
Q Consensus 209 ---~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 285 (484)
.....||+.|+|||++.+..++.++|||||||++|||++|..||............... ...++...+..+
T Consensus 178 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~ 251 (353)
T 3txo_A 178 GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILND------EVVYPTWLHEDA 251 (353)
T ss_dssp --------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHH
T ss_pred CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHH
Confidence 23567999999999999888999999999999999999999998765433332222111 112455567889
Q ss_pred HHHHHHHhccCCCCCCCh------HHHHHHH
Q 011519 286 VRLASRCLQYEPRERPNP------RSLVTAL 310 (484)
Q Consensus 286 ~~li~~cl~~dp~~Rps~------~~il~~l 310 (484)
.+|+.+||..||.+||++ .++++|-
T Consensus 252 ~~li~~lL~~dP~~R~~~~~~~~~~~il~hp 282 (353)
T 3txo_A 252 TGILKSFMTKNPTMRLGSLTQGGEHAILRHP 282 (353)
T ss_dssp HHHHHHHTCSSGGGSTTSGGGTCTHHHHTSG
T ss_pred HHHHHHHhhhCHHHccCCcccCCHHHHhhCC
Confidence 999999999999999998 8888874
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-47 Score=374.44 Aligned_cols=249 Identities=16% Similarity=0.219 Sum_probs=207.5
Q ss_pred CCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCC---CccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEE
Q 011519 55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (484)
Q Consensus 55 ~f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 130 (484)
++.+|++++.||+|+||+||+|.. .+++.||||++.... ....+.+.+|+.+|+.++|||||++++++.+.+..++
T Consensus 13 ~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~l 92 (384)
T 4fr4_A 13 NFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFM 92 (384)
T ss_dssp CGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 467889999999999999999994 568899999986432 2235678999999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-
Q 011519 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 209 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~- 209 (484)
||||+.||+|.+++. ..+.+++..+..++.||+.||.|||+. ||+||||||+|||++.+|.+||+|||++......
T Consensus 93 v~e~~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~LH~~-givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 169 (384)
T 4fr4_A 93 VVDLLLGGDLRYHLQ--QNVHFKEETVKLFICELVMALDYLQNQ-RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET 169 (384)
T ss_dssp EECCCTTEEHHHHHH--TTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred EEecCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCcHHHeEECCCCCEEEeccceeeeccCCC
Confidence 999999999999997 456799999999999999999999999 9999999999999999999999999999876443
Q ss_pred --CcccCCCCCCCcccccC---CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHH
Q 011519 210 --RSYSTNLAFTPPEYLRT---GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTE 284 (484)
Q Consensus 210 --~~~~~t~~y~aPE~~~~---~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (484)
....||+.|+|||++.+ ..++.++|||||||++|+|++|..||.......... ....+.. ....++...+..
T Consensus 170 ~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~-~~~~~~~--~~~~~p~~~s~~ 246 (384)
T 4fr4_A 170 QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKE-IVHTFET--TVVTYPSAWSQE 246 (384)
T ss_dssp CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHH-HHHHHHH--CCCCCCTTSCHH
T ss_pred ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHH-HHHHHhh--cccCCCCcCCHH
Confidence 45679999999999974 458999999999999999999999986422111000 0000000 112345566789
Q ss_pred HHHHHHHHhccCCCCCCC-hHHHHHH
Q 011519 285 LVRLASRCLQYEPRERPN-PRSLVTA 309 (484)
Q Consensus 285 l~~li~~cl~~dp~~Rps-~~~il~~ 309 (484)
+.+||.+||+.||.+||+ +.++++|
T Consensus 247 ~~~li~~lL~~dP~~R~s~~~~l~~h 272 (384)
T 4fr4_A 247 MVSLLKKLLEPNPDQRFSQLSDVQNF 272 (384)
T ss_dssp HHHHHHHHSCSSGGGSCCSHHHHHTS
T ss_pred HHHHHHHHhcCCHhHhcccHHHHHcC
Confidence 999999999999999998 7888776
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-46 Score=358.98 Aligned_cols=253 Identities=23% Similarity=0.350 Sum_probs=211.0
Q ss_pred CCcccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecC
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~ 135 (484)
..+|++++.||+|+||+||++...++..||||+++.... ..+++.+|+.++..++||||+++++++.+.+..++||||+
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 101 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 101 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEecc
Confidence 357888999999999999999988888999999986542 3567999999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-----C
Q 011519 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----R 210 (484)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~-----~ 210 (484)
++|+|.+++.. ....+++..++.++.||+.||.|||+. |++||||||+|||++.++.+||+|||++...... .
T Consensus 102 ~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~ 179 (283)
T 3gen_A 102 ANGCLLNYLRE-MRHRFQTQQLLEMCKDVCEAMEYLESK-QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV 179 (283)
T ss_dssp TTCBHHHHHHC-GGGCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTT
T ss_pred CCCcHHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHHC-CccCCCCccceEEEcCCCCEEEcccccccccccccccccc
Confidence 99999999964 245699999999999999999999999 9999999999999999999999999999865432 2
Q ss_pred cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHH
Q 011519 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289 (484)
Q Consensus 211 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 289 (484)
...+|+.|+|||++.+..++.++||||||+++|+|+| |+.||............... .....+...++.+.+|+
T Consensus 180 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~li 254 (283)
T 3gen_A 180 GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG-----LRLYRPHLASEKVYTIM 254 (283)
T ss_dssp STTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTT-----CCCCCCTTCCHHHHHHH
T ss_pred CCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcc-----cCCCCCCcCCHHHHHHH
Confidence 3456778999999998889999999999999999998 88887654322222111111 11223344567899999
Q ss_pred HHHhccCCCCCCChHHHHHHHHhhhcC
Q 011519 290 SRCLQYEPRERPNPRSLVTALVTLQKD 316 (484)
Q Consensus 290 ~~cl~~dp~~Rps~~~il~~l~~~~~~ 316 (484)
.+||+.||.+|||+.+++++|+.+...
T Consensus 255 ~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 255 YSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp HHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 999999999999999999999987643
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-46 Score=366.28 Aligned_cols=249 Identities=17% Similarity=0.157 Sum_probs=207.1
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCc------cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEE
Q 011519 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP------DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 130 (484)
.|.+.+.||+|+||+||+|.. .+++.||||++...... ..+.+.+|+.+|+.++||||+++++++...+..++
T Consensus 12 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 91 (326)
T 2y0a_A 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVIL 91 (326)
T ss_dssp HEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred ceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 578888999999999999995 56899999999754322 35679999999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCC----CceeeccCCcccc
Q 011519 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV----NPRLSCFGLMKNS 206 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~----~~kl~DfG~a~~~ 206 (484)
||||+++|+|.+++. ....+++..++.++.||+.||.|||+. ||+||||||+|||++.++ .+||+|||++...
T Consensus 92 v~e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~al~~lH~~-~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~ 168 (326)
T 2y0a_A 92 ILELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVYYLHSL-QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168 (326)
T ss_dssp EEECCCSCBHHHHHT--TSSCCBHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESCSSSSSCCEEECCCTTCEEC
T ss_pred EEEcCCCCCHHHHHH--hcCCcCHHHHHHHHHHHHHHHHHHHHC-CeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeEC
Confidence 999999999999996 456799999999999999999999999 999999999999999877 8999999999876
Q ss_pred CCC---CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHH
Q 011519 207 RDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283 (484)
Q Consensus 207 ~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (484)
... ....||+.|+|||++.+..++.++|||||||++|+|++|..||................. ..........+.
T Consensus 169 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 246 (326)
T 2y0a_A 169 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY--EFEDEYFSNTSA 246 (326)
T ss_dssp CTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCC--CCCHHHHTTSCH
T ss_pred CCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCC--CcCccccccCCH
Confidence 432 356789999999999988999999999999999999999999865433222111110000 000001123467
Q ss_pred HHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 284 ELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 284 ~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
.+.+|+.+||..||.+|||+.++++|-+
T Consensus 247 ~~~~li~~~L~~dP~~Rpt~~e~l~hp~ 274 (326)
T 2y0a_A 247 LAKDFIRRLLVKDPKKRMTIQDSLQHPW 274 (326)
T ss_dssp HHHHHHHHHSCSSGGGSCCHHHHHHSTT
T ss_pred HHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence 8999999999999999999999999743
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-47 Score=373.12 Aligned_cols=255 Identities=17% Similarity=0.119 Sum_probs=199.3
Q ss_pred CCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEe
Q 011519 55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (484)
Q Consensus 55 ~f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 133 (484)
...+|++++.||+|+||+||+++. .+++.||||++..... ..+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 18 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 96 (361)
T 3uc3_A 18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIME 96 (361)
T ss_dssp CTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEE
Confidence 456899999999999999999995 4789999999976542 34678899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCC--ceeeccCCccccCC---
Q 011519 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN--PRLSCFGLMKNSRD--- 208 (484)
Q Consensus 134 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~--~kl~DfG~a~~~~~--- 208 (484)
|+++|+|.+++.. .+.+++..++.++.||+.||.|||+. ||+||||||+|||++.++. +||+|||+++....
T Consensus 97 ~~~~~~L~~~l~~--~~~~~~~~~~~i~~ql~~~L~~LH~~-~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~ 173 (361)
T 3uc3_A 97 YASGGELYERICN--AGRFSEDEARFFFQQLLSGVSYCHSM-QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ 173 (361)
T ss_dssp CCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TCCSCCCCGGGEEECSSSSCCEEECCCCCC--------
T ss_pred eCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEEcCCCCceEEEeecCccccccccCC
Confidence 9999999999963 45699999999999999999999999 9999999999999987765 99999999875332
Q ss_pred CCcccCCCCCCCcccccCCCCCCC-CceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHH
Q 011519 209 GRSYSTNLAFTPPEYLRTGRVTPE-SVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287 (484)
Q Consensus 209 ~~~~~~t~~y~aPE~~~~~~~~~~-~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (484)
.....||+.|+|||++.+..++.+ +|||||||++|+|++|+.||...............+.............++.+.+
T Consensus 174 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 253 (361)
T 3uc3_A 174 PKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCH 253 (361)
T ss_dssp -------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSCCCHHHHH
T ss_pred CCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCCCHHHHH
Confidence 245678999999999988777655 8999999999999999998865321111111111111111111112235678999
Q ss_pred HHHHHhccCCCCCCChHHHHHHHHhh
Q 011519 288 LASRCLQYEPRERPNPRSLVTALVTL 313 (484)
Q Consensus 288 li~~cl~~dp~~Rps~~~il~~l~~~ 313 (484)
||.+||+.||.+|||+.++++|-+-.
T Consensus 254 li~~~L~~dP~~Rps~~ell~hp~f~ 279 (361)
T 3uc3_A 254 LISRIFVADPATRISIPEIKTHSWFL 279 (361)
T ss_dssp HHHHHSCSCTTTSCCHHHHHTSHHHH
T ss_pred HHHHHccCChhHCcCHHHHHhCcchh
Confidence 99999999999999999999996543
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-47 Score=366.32 Aligned_cols=253 Identities=22% Similarity=0.335 Sum_probs=209.4
Q ss_pred CcccccccCCCCCCceEEEEEe-CCC-------cEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCce
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQ-------FRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER 128 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 128 (484)
.+|.+++.||+|+||+||+|.. .++ ..||+|++........+.+.+|+.++++++||||+++++++...+..
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDEN 87 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCC
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCC
Confidence 4678889999999999999984 334 57999999766555677899999999999999999999999999999
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCC--------ceeecc
Q 011519 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN--------PRLSCF 200 (484)
Q Consensus 129 ~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~--------~kl~Df 200 (484)
++||||+++|+|.+++.. ....+++..++.++.||+.||.|||+. |++||||||+|||++.++. +||+||
T Consensus 88 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Df 165 (289)
T 4fvq_A 88 ILVQEFVKFGSLDTYLKK-NKNCINILWKLEVAKQLAAAMHFLEEN-TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDP 165 (289)
T ss_dssp EEEEECCTTCBHHHHHHH-TGGGCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEEEECCBGGGTBCCEEEECCC
T ss_pred EEEEECCCCCCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHhhC-CeECCCcCcceEEEecCCcccccccceeeeccC
Confidence 999999999999999974 233499999999999999999999999 9999999999999998877 999999
Q ss_pred CCccccCCCCcccCCCCCCCcccccC-CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCCh
Q 011519 201 GLMKNSRDGRSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSS 279 (484)
Q Consensus 201 G~a~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (484)
|++..........+|+.|+|||++.+ ..++.++||||||+++|+|++|..|+............... ....+.
T Consensus 166 g~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~------~~~~~~ 239 (289)
T 4fvq_A 166 GISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYED------RHQLPA 239 (289)
T ss_dssp CSCTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHT------TCCCCC
T ss_pred cccccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhhc------cCCCCC
Confidence 99987766666778999999999987 66899999999999999999977665433221111111100 112233
Q ss_pred HHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhcCC
Q 011519 280 DEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (484)
Q Consensus 280 ~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 317 (484)
..+..+.+|+.+||+.||.+|||+.+++++|+.+....
T Consensus 240 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~ 277 (289)
T 4fvq_A 240 PKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPD 277 (289)
T ss_dssp CSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC---
T ss_pred CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCC
Confidence 34567999999999999999999999999999887643
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-46 Score=379.41 Aligned_cols=250 Identities=16% Similarity=0.160 Sum_probs=208.1
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCc--cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEe
Q 011519 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 133 (484)
.+|++++.||+|+||+||+|. ..+|+.||+|++...... ..+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 11 ~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E 90 (444)
T 3soa_A 11 EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFD 90 (444)
T ss_dssp HHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEEC
T ss_pred CCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEE
Confidence 468888999999999999999 467899999999765433 34568999999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeec---CCCCceeeccCCccccCCC-
Q 011519 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD---DDVNPRLSCFGLMKNSRDG- 209 (484)
Q Consensus 134 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~---~~~~~kl~DfG~a~~~~~~- 209 (484)
|++||+|.+++.. .+.+++..+..++.||+.||.|||+. ||+||||||+|||++ .++.+||+|||++......
T Consensus 91 ~~~gg~L~~~i~~--~~~~~e~~~~~i~~qil~aL~~lH~~-givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~ 167 (444)
T 3soa_A 91 LVTGGELFEDIVA--REYYSEADASHCIQQILEAVLHCHQM-GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ 167 (444)
T ss_dssp CCBCCBHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTC
T ss_pred eCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCC
Confidence 9999999999973 45699999999999999999999999 999999999999998 4678999999999876543
Q ss_pred ---CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHH
Q 011519 210 ---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 286 (484)
Q Consensus 210 ---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 286 (484)
....||+.|+|||++.+..++.++|||||||++|+|++|..||................... ........++++.
T Consensus 168 ~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~--~~~~~~~~s~~~~ 245 (444)
T 3soa_A 168 QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDF--PSPEWDTVTPEAK 245 (444)
T ss_dssp CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCC--CTTTTTTSCHHHH
T ss_pred ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCC--CccccccCCHHHH
Confidence 34578999999999998899999999999999999999999987654333222211111110 1111234578899
Q ss_pred HHHHHHhccCCCCCCChHHHHHHHH
Q 011519 287 RLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 287 ~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
+|+.+||+.||.+|||+.++++|-+
T Consensus 246 ~li~~~L~~dP~~Rpta~e~L~hp~ 270 (444)
T 3soa_A 246 DLINKMLTINPSKRITAAEALKHPW 270 (444)
T ss_dssp HHHHHHSCSSTTTSCCHHHHHHSCT
T ss_pred HHHHHHcCCChhHCCCHHHHhcCcc
Confidence 9999999999999999999999844
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-46 Score=370.45 Aligned_cols=251 Identities=18% Similarity=0.202 Sum_probs=208.6
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCc--cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEe
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 133 (484)
..|++++.||+|+||+||+|.. .+++.||||++...... ..+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 29 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e 108 (362)
T 2bdw_A 29 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD 108 (362)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred cCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence 3678889999999999999995 56899999999765432 35678999999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCC---CCceeeccCCccccCCC-
Q 011519 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD---VNPRLSCFGLMKNSRDG- 209 (484)
Q Consensus 134 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~---~~~kl~DfG~a~~~~~~- 209 (484)
|++||+|.+++. ....+++..+..++.||+.||.|||+. ||+||||||+|||++.+ +.+||+|||++......
T Consensus 109 ~~~gg~L~~~l~--~~~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~ 185 (362)
T 2bdw_A 109 LVTGGELFEDIV--AREFYSEADASHCIQQILESIAYCHSN-GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE 185 (362)
T ss_dssp CCCSCBHHHHHT--TCSCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCC
T ss_pred cCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeccCchHHEEEecCCCCCCEEEeecCcceEecCCc
Confidence 999999999996 445799999999999999999999999 99999999999999865 45999999999876543
Q ss_pred --CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHH
Q 011519 210 --RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287 (484)
Q Consensus 210 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (484)
....||+.|+|||++.+..++.++|||||||++|+|++|..||.................. ........+++++.+
T Consensus 186 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~ 263 (362)
T 2bdw_A 186 AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD--YPSPEWDTVTPEAKS 263 (362)
T ss_dssp SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC--CCTTGGGGSCHHHHH
T ss_pred ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCC--CCcccccCCCHHHHH
Confidence 3467899999999999888999999999999999999999998765332222111111110 001111345788999
Q ss_pred HHHHHhccCCCCCCChHHHHHHHHh
Q 011519 288 LASRCLQYEPRERPNPRSLVTALVT 312 (484)
Q Consensus 288 li~~cl~~dp~~Rps~~~il~~l~~ 312 (484)
||.+||..||.+|||+.++++|-+-
T Consensus 264 li~~~L~~dP~~R~t~~e~l~hp~~ 288 (362)
T 2bdw_A 264 LIDSMLTVNPKKRITADQALKVPWI 288 (362)
T ss_dssp HHHHHSCSSGGGSCCHHHHTTSHHH
T ss_pred HHHHHcCCChhhCcCHHHHhcCccc
Confidence 9999999999999999999998553
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-47 Score=375.05 Aligned_cols=255 Identities=21% Similarity=0.310 Sum_probs=210.9
Q ss_pred CcccccccCCCCCCceEEEEEeC------CCcEEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 129 (484)
..|.+++.||+|+||+||+|.+. +++.||||+++..... ....+.+|+.++++++||||+++++++......+
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 150 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF 150 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCE
Confidence 46788899999999999999842 4678999999754332 3557899999999999999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCC-----CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCC---CceeeccC
Q 011519 130 LVAEYMPNDTLAKHLFHWE-----TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV---NPRLSCFG 201 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~---~~kl~DfG 201 (484)
+||||+++|+|.+++.... ...+++..++.++.||+.||.|||+. ||+||||||+|||++.++ .+||+|||
T Consensus 151 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~~~~~~~kL~DFG 229 (367)
T 3l9p_A 151 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN-HFIHRDIAARNCLLTCPGPGRVAKIGDFG 229 (367)
T ss_dssp EEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEESCSSTTCCEEECCCH
T ss_pred EEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC-CeeCCCCChhhEEEecCCCCceEEECCCc
Confidence 9999999999999997432 24589999999999999999999999 999999999999999555 59999999
Q ss_pred Ccccc------CCCCcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhcccccccccccc
Q 011519 202 LMKNS------RDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLE 274 (484)
Q Consensus 202 ~a~~~------~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 274 (484)
+++.. .......+|+.|+|||++.+..++.++|||||||++|||+| |..||.............. ...
T Consensus 230 ~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~-----~~~ 304 (367)
T 3l9p_A 230 MARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTS-----GGR 304 (367)
T ss_dssp HHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHT-----TCC
T ss_pred cccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-----CCC
Confidence 98743 22334567889999999998899999999999999999998 8888765433322211111 111
Q ss_pred CCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhcCC
Q 011519 275 GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (484)
Q Consensus 275 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 317 (484)
...+..++..+.+|+.+||+.||.+|||+.+|+++|+.+....
T Consensus 305 ~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~ 347 (367)
T 3l9p_A 305 MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 347 (367)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred CCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhCh
Confidence 2234556778999999999999999999999999999987764
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-46 Score=359.66 Aligned_cols=248 Identities=15% Similarity=0.173 Sum_probs=201.0
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCc--------------------------cHHHHHHHHHHHh
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--------------------------DARQFLEEARAVG 108 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--------------------------~~~~~~~E~~~l~ 108 (484)
+.+|.+++.||+|+||+||+|.. .+++.||||++...... ..+.+.+|+.+++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 46788999999999999999994 57899999999654321 1346889999999
Q ss_pred cCCCCceeeeeeeeee--CCceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccc
Q 011519 109 QLRNRRLANLLGCCCE--GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR 186 (484)
Q Consensus 109 ~l~hpniv~l~~~~~~--~~~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~N 186 (484)
+++||||+++++++.+ .+..++||||+++++|.+++ ....+++..++.++.||+.||.|||+. |++||||||+|
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dlkp~N 167 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP---TLKPLSEDQARFYFQDLIKGIEYLHYQ-KIIHRDIKPSN 167 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSS---CSSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGG
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHH
Confidence 9999999999999986 56789999999999999876 345799999999999999999999999 99999999999
Q ss_pred eeecCCCCceeeccCCccccCCC----CcccCCCCCCCcccccCCC---CCCCCceeehHHHHHHHhhCCCCCCchhhHH
Q 011519 187 IVFDDDVNPRLSCFGLMKNSRDG----RSYSTNLAFTPPEYLRTGR---VTPESVMYSFGTLLLDLLSGKHIPPSHALDL 259 (484)
Q Consensus 187 ill~~~~~~kl~DfG~a~~~~~~----~~~~~t~~y~aPE~~~~~~---~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~ 259 (484)
||++.++.+||+|||++...... ....||+.|+|||++.+.. .+.++|||||||++|+|++|+.||.......
T Consensus 168 il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~ 247 (298)
T 2zv2_A 168 LLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMC 247 (298)
T ss_dssp EEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred EEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHH
Confidence 99999999999999999876543 3457899999999998655 3778999999999999999999987543322
Q ss_pred hhhccccccccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 260 IRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
......... .........++.+.+|+.+||+.||++|||+.++++|-+
T Consensus 248 ~~~~~~~~~----~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~ 295 (298)
T 2zv2_A 248 LHSKIKSQA----LEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPW 295 (298)
T ss_dssp HHHHHHHCC----CCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCHH
T ss_pred HHHHHhccc----CCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhcCcc
Confidence 221111111 111112345678999999999999999999999998743
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-47 Score=371.16 Aligned_cols=248 Identities=17% Similarity=0.166 Sum_probs=212.1
Q ss_pred CCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCC---CccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEE
Q 011519 55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (484)
Q Consensus 55 ~f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 130 (484)
...+|++++.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|+.+|+.++||||+++++++.+.+..++
T Consensus 39 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 118 (350)
T 1rdq_E 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM 118 (350)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred CHHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEE
Confidence 346789999999999999999995 578999999996432 1235678999999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-
Q 011519 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 209 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~- 209 (484)
||||++||+|.+++.. .+.+++..+..++.||+.||.|||+. ||+||||||+|||++.++.+||+|||+++.....
T Consensus 119 v~e~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~ 195 (350)
T 1rdq_E 119 VMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSL-DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195 (350)
T ss_dssp EEECCTTCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECSSCB
T ss_pred EEcCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CcccccCccceEEECCCCCEEEcccccceeccCCc
Confidence 9999999999999973 35699999999999999999999999 9999999999999999999999999999876543
Q ss_pred CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHH
Q 011519 210 RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289 (484)
Q Consensus 210 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 289 (484)
....||+.|+|||++.+..++.++|||||||++|||++|..||............... ...++...+..+.+||
T Consensus 196 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~~li 269 (350)
T 1rdq_E 196 WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG------KVRFPSHFSSDLKDLL 269 (350)
T ss_dssp CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTCCHHHHHHH
T ss_pred ccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcC------CCCCCCCCCHHHHHHH
Confidence 4567899999999999989999999999999999999999998764332222111111 1124556678999999
Q ss_pred HHHhccCCCCCCC-----hHHHHHHHH
Q 011519 290 SRCLQYEPRERPN-----PRSLVTALV 311 (484)
Q Consensus 290 ~~cl~~dp~~Rps-----~~~il~~l~ 311 (484)
.+||+.||.+||+ +.+|++|-+
T Consensus 270 ~~lL~~dp~~R~~~~~~~~~ei~~h~~ 296 (350)
T 1rdq_E 270 RNLLQVDLTKRFGNLKNGVNDIKNHKW 296 (350)
T ss_dssp HHHSCSCTTTCTTSSTTTTHHHHTSGG
T ss_pred HHHhhcCHHhccCCccCCHHHHHhCcC
Confidence 9999999999998 999998844
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-47 Score=372.90 Aligned_cols=248 Identities=19% Similarity=0.218 Sum_probs=209.0
Q ss_pred CCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCC---CccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEE
Q 011519 55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (484)
Q Consensus 55 ~f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 130 (484)
.+..|.+++.||+|+||+||+|.. .+++.||||++.... ......+.+|+.+++.++||||+++++++...+..++
T Consensus 7 ~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 86 (336)
T 3h4j_B 7 HIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVM 86 (336)
T ss_dssp EETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 456889999999999999999994 678999999986432 1124578999999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-
Q 011519 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 209 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~- 209 (484)
||||+ +|+|.+++.. .+.+++.+++.++.||+.||.|||+. ||+||||||+|||++.++.+||+|||++......
T Consensus 87 v~E~~-~g~l~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~-givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~ 162 (336)
T 3h4j_B 87 VIEYA-GGELFDYIVE--KKRMTEDEGRRFFQQIICAIEYCHRH-KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN 162 (336)
T ss_dssp EECCC-CEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHH-TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB
T ss_pred EEECC-CCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCchhhEEEcCCCCEEEEEeccceeccCCc
Confidence 99999 7799999863 45699999999999999999999999 9999999999999999999999999999875543
Q ss_pred --CcccCCCCCCCcccccCCCC-CCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHH
Q 011519 210 --RSYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 286 (484)
Q Consensus 210 --~~~~~t~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 286 (484)
....||+.|+|||++.+..+ +.++|||||||++|+|++|..||......... ..+. . .....+...++.+.
T Consensus 163 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~----~~i~-~-~~~~~p~~~s~~~~ 236 (336)
T 3h4j_B 163 FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLF----KKVN-S-CVYVMPDFLSPGAQ 236 (336)
T ss_dssp TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCB----CCCC-S-SCCCCCTTSCHHHH
T ss_pred ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHH----HHHH-c-CCCCCcccCCHHHH
Confidence 45678999999999988775 78999999999999999999988654222111 1111 1 01234556678999
Q ss_pred HHHHHHhccCCCCCCChHHHHHHHHh
Q 011519 287 RLASRCLQYEPRERPNPRSLVTALVT 312 (484)
Q Consensus 287 ~li~~cl~~dp~~Rps~~~il~~l~~ 312 (484)
+|+.+||..||.+|||+.+++++-+-
T Consensus 237 ~li~~~L~~dP~~Rpt~~eil~hp~~ 262 (336)
T 3h4j_B 237 SLIRRMIVADPMQRITIQEIRRDPWF 262 (336)
T ss_dssp HHHHTTSCSSGGGSCCHHHHTTCHHH
T ss_pred HHHHHHcCCChhHCcCHHHHHhChhh
Confidence 99999999999999999999998664
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-47 Score=367.86 Aligned_cols=255 Identities=15% Similarity=0.212 Sum_probs=203.0
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCc----eEEEE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDE----RLLVA 132 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~----~~lv~ 132 (484)
.+|++++.||+|+||+||+|+.. ++.||||++.... .....+.+|+.++.+++||||+++++++..... .++||
T Consensus 24 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~ 101 (322)
T 3soc_A 24 MPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLIT 101 (322)
T ss_dssp EEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred hhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEE
Confidence 57889999999999999999875 7899999996543 233456779999999999999999999987543 69999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCC---------CcccccccccceeecCCCCceeeccCCc
Q 011519 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE---------RALYHDLNAYRIVFDDDVNPRLSCFGLM 203 (484)
Q Consensus 133 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~---------~ivH~Dlkp~Nill~~~~~~kl~DfG~a 203 (484)
||+++|+|.+++.. ..+++..++.++.||+.||.|||+.. ||+||||||+|||++.++.+||+|||++
T Consensus 102 e~~~~g~L~~~l~~---~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a 178 (322)
T 3soc_A 102 AFHEKGSLSDFLKA---NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLA 178 (322)
T ss_dssp ECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred ecCCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcc
Confidence 99999999999963 45999999999999999999999852 8999999999999999999999999999
Q ss_pred cccCCC------CcccCCCCCCCcccccCC-----CCCCCCceeehHHHHHHHhhCCCCCCchhhH--------------
Q 011519 204 KNSRDG------RSYSTNLAFTPPEYLRTG-----RVTPESVMYSFGTLLLDLLSGKHIPPSHALD-------------- 258 (484)
Q Consensus 204 ~~~~~~------~~~~~t~~y~aPE~~~~~-----~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~-------------- 258 (484)
+..... ....||+.|+|||++.+. .++.++|||||||++|||+||+.||......
T Consensus 179 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 258 (322)
T 3soc_A 179 LKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPS 258 (322)
T ss_dssp EEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCC
T ss_pred cccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCc
Confidence 765432 235789999999999863 4567889999999999999999887542110
Q ss_pred --HhhhccccccccccccCC-CChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhcC
Q 011519 259 --LIRDRNIQTLTDSCLEGQ-FSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316 (484)
Q Consensus 259 --~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 316 (484)
............+..... .....+..+.+|+.+||+.||++|||+.++++.|+.+++.
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 259 LEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp HHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 000000000001110000 1234567799999999999999999999999999988764
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-46 Score=363.13 Aligned_cols=254 Identities=19% Similarity=0.214 Sum_probs=203.6
Q ss_pred CCCcccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCc--cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEE
Q 011519 55 GFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (484)
Q Consensus 55 ~f~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 132 (484)
-..+|++++.||+|+||+||+|...+++.||||++...... ....+.+|+.++++++||||+++++++.+.+..++||
T Consensus 19 l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 98 (311)
T 3niz_A 19 LMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVF 98 (311)
T ss_dssp SSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEE
T ss_pred hHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEE
Confidence 35789999999999999999999888999999999754322 2467899999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC---
Q 011519 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--- 209 (484)
Q Consensus 133 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~--- 209 (484)
||+++ +|.+++.. ....+++..+..++.||+.||.|||+. ||+||||||+|||++.++.+||+|||+++.....
T Consensus 99 e~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~ 175 (311)
T 3niz_A 99 EFMEK-DLKKVLDE-NKTGLQDSQIKIYLYQLLRGVAHCHQH-RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRS 175 (311)
T ss_dssp ECCSE-EHHHHHHT-CTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC-
T ss_pred cCCCC-CHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCchHhEEECCCCCEEEccCcCceecCCCccc
Confidence 99975 88888864 345699999999999999999999999 9999999999999999999999999999875432
Q ss_pred -CcccCCCCCCCcccccC-CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcccccc-------------------
Q 011519 210 -RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL------------------- 268 (484)
Q Consensus 210 -~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~------------------- 268 (484)
....+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||...............+
T Consensus 176 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 255 (311)
T 3niz_A 176 YTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQ 255 (311)
T ss_dssp --CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHS
T ss_pred ccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhh
Confidence 34567999999999876 458999999999999999999999886532211110000000
Q ss_pred -----ccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 269 -----TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 269 -----~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
.............++++.+|+.+||+.||.+|||+.++++|-+
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 303 (311)
T 3niz_A 256 RTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPY 303 (311)
T ss_dssp CCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGG
T ss_pred cccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCcc
Confidence 0000000011234578999999999999999999999999743
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-47 Score=375.59 Aligned_cols=251 Identities=16% Similarity=0.219 Sum_probs=206.1
Q ss_pred CCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCc---cHHHHHHHHHHHhcC-CCCceeeeeeeeeeCCceE
Q 011519 55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP---DARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL 129 (484)
Q Consensus 55 ~f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~ 129 (484)
...+|++++.||+|+||+||+|+. .+++.||||+++..... ..+.+.+|..++.++ +|||||++++++.+.+..+
T Consensus 50 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 129 (396)
T 4dc2_A 50 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF 129 (396)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred ChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEE
Confidence 456789999999999999999995 56889999999754322 234588999999887 8999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC-
Q 011519 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD- 208 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~- 208 (484)
|||||++||+|..++.. .+.+++..+..++.||+.||.|||+. ||+||||||+|||++.++.+||+|||+++....
T Consensus 130 lV~E~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~-givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 206 (396)
T 4dc2_A 130 FVIEYVNGGDLMFHMQR--QRKLPEEHARFYSAEISLALNYLHER-GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 206 (396)
T ss_dssp EEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEEEcCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CEEeccCCHHHEEECCCCCEEEeecceeeecccC
Confidence 99999999999999973 45799999999999999999999999 999999999999999999999999999986322
Q ss_pred ---CCcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhc-----cccccccccccCCCChH
Q 011519 209 ---GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR-----NIQTLTDSCLEGQFSSD 280 (484)
Q Consensus 209 ---~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 280 (484)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||........... ....+.. ....+|..
T Consensus 207 ~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~--~~~~~p~~ 284 (396)
T 4dc2_A 207 GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE--KQIRIPRS 284 (396)
T ss_dssp TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHH--CCCCCCTT
T ss_pred CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhc--cccCCCCc
Confidence 2456799999999999999999999999999999999999999853211100000 0001111 11235566
Q ss_pred HHHHHHHHHHHHhccCCCCCCCh------HHHHHHH
Q 011519 281 EGTELVRLASRCLQYEPRERPNP------RSLVTAL 310 (484)
Q Consensus 281 ~~~~l~~li~~cl~~dp~~Rps~------~~il~~l 310 (484)
.+.++.+||.+||+.||.+||++ .++++|-
T Consensus 285 ~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hp 320 (396)
T 4dc2_A 285 LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHP 320 (396)
T ss_dssp SCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHST
T ss_pred CCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCc
Confidence 78899999999999999999985 6787773
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-46 Score=381.08 Aligned_cols=253 Identities=25% Similarity=0.352 Sum_probs=212.0
Q ss_pred CCCcccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCC-ceEEEEe
Q 011519 55 GFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD-ERLLVAE 133 (484)
Q Consensus 55 ~f~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~-~~~lv~E 133 (484)
+..++++++.||+|+||+||+|... ++.||||+++... ..+.|.+|+.+|++++||||+++++++.... ..+||||
T Consensus 191 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e 267 (450)
T 1k9a_A 191 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 267 (450)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEE
T ss_pred ChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEE
Confidence 3467888999999999999999974 6799999998654 4578999999999999999999999987665 7899999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-Ccc
Q 011519 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-RSY 212 (484)
Q Consensus 134 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~-~~~ 212 (484)
|+++|+|.+++.......+++..++.++.||+.||.|||++ +++||||||+|||++.++.+||+|||+++..... ...
T Consensus 268 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 346 (450)
T 1k9a_A 268 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN-NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG 346 (450)
T ss_dssp CCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECTTSCEEECCCTTCEECC------
T ss_pred ecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCCHhhEEECCCCCEEEeeCCCcccccccccCC
Confidence 99999999999764445589999999999999999999999 9999999999999999999999999999865433 234
Q ss_pred cCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHH
Q 011519 213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291 (484)
Q Consensus 213 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 291 (484)
.+++.|+|||++.+..++.++|||||||++|||+| |..||+........... ....+...+..+++.+.+||.+
T Consensus 347 ~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i-----~~~~~~~~p~~~~~~l~~li~~ 421 (450)
T 1k9a_A 347 KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV-----EKGYKMDAPDGCPPAVYDVMKN 421 (450)
T ss_dssp CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHH-----HTTCCCCCCTTCCHHHHHHHHH
T ss_pred CCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-----HcCCCCCCCCcCCHHHHHHHHH
Confidence 66789999999999999999999999999999998 88887654222111111 1111223456677899999999
Q ss_pred HhccCCCCCCChHHHHHHHHhhhcC
Q 011519 292 CLQYEPRERPNPRSLVTALVTLQKD 316 (484)
Q Consensus 292 cl~~dp~~Rps~~~il~~l~~~~~~ 316 (484)
||+.||.+|||+.++++.|+.+...
T Consensus 422 cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 422 CWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp HTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HcCCChhHCcCHHHHHHHHHHHHHh
Confidence 9999999999999999999988754
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-46 Score=366.36 Aligned_cols=256 Identities=16% Similarity=0.139 Sum_probs=207.0
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCccHHHHHHHHHHHhcC-CCCceeeeeeeeeeCCceEEEEec
Q 011519 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEY 134 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~Ey 134 (484)
..|++++.||+|+||+||+|. ..+++.||||++.... ..+.+.+|+.+++.+ +||||+++++++...+..++||||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~ 86 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLEL 86 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEEC
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEe
Confidence 467888999999999999999 4679999999987543 234588999999999 899999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCC-----ceeeccCCccccCCC
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN-----PRLSCFGLMKNSRDG 209 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~-----~kl~DfG~a~~~~~~ 209 (484)
+ +++|.+++... .+.+++..++.++.||+.||.|||+. ||+||||||+|||++.++. +||+|||+++.....
T Consensus 87 ~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~-~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~ 163 (330)
T 2izr_A 87 L-GPSLEDLFDLC-DRTFSLKTVLMIAIQLISRMEYVHSK-NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDP 163 (330)
T ss_dssp C-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCT
T ss_pred C-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecC
Confidence 9 99999999753 46799999999999999999999999 9999999999999998887 999999999865332
Q ss_pred -----------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhh--ccccccccccccCC
Q 011519 210 -----------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD--RNIQTLTDSCLEGQ 276 (484)
Q Consensus 210 -----------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~--~~~~~~~~~~~~~~ 276 (484)
....||+.|+|||++.+..++.++|||||||++|||++|..||.......... ..+...........
T Consensus 164 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 243 (330)
T 2izr_A 164 ETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEV 243 (330)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCHHH
T ss_pred CCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCHHH
Confidence 35678999999999999899999999999999999999999986531110000 00000000000000
Q ss_pred CChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhcCCC
Q 011519 277 FSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 318 (484)
Q Consensus 277 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~ 318 (484)
.....+ ++.+|+..||+.||.+||++.+|++.|+.+.....
T Consensus 244 ~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~~ 284 (330)
T 2izr_A 244 LCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKG 284 (330)
T ss_dssp HTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred HhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcC
Confidence 011234 89999999999999999999999999988765543
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-46 Score=358.94 Aligned_cols=252 Identities=17% Similarity=0.200 Sum_probs=202.9
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCc--cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEe
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 133 (484)
.+|++++.||+|+||+||+|.. .+++.||||++...... ....+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 5788999999999999999995 57899999999755432 24678999999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----
Q 011519 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 209 (484)
Q Consensus 134 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~---- 209 (484)
|+++ +|.+++.. ..+.+++..+..++.||+.||.|||+. ||+||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~~~~-~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lH~~-~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 158 (292)
T 3o0g_A 82 FCDQ-DLKKYFDS-CNGDLDPEIVKSFLFQLLKGLGFCHSR-NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCY 158 (292)
T ss_dssp CCSE-EHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSCC
T ss_pred cCCC-CHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCCCEEEeecccceecCCccccc
Confidence 9976 66666643 346799999999999999999999999 9999999999999999999999999999865432
Q ss_pred CcccCCCCCCCcccccCCC-CCCCCceeehHHHHHHHhhCCCCCCchh-hHHhhhcccc--------------cccc---
Q 011519 210 RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHA-LDLIRDRNIQ--------------TLTD--- 270 (484)
Q Consensus 210 ~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~tg~~p~~~~~-~~~~~~~~~~--------------~~~~--- 270 (484)
....+|+.|+|||++.+.. ++.++|||||||++|+|+||..|+.... .......... ....
T Consensus 159 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 238 (292)
T 3o0g_A 159 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKP 238 (292)
T ss_dssp CSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCC
T ss_pred cCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccc
Confidence 3457799999999998766 7999999999999999999988754321 1111000000 0000
Q ss_pred ------ccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 271 ------SCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 271 ------~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
...........+..+.+|+.+||+.||++|||+.++++|-+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 285 (292)
T 3o0g_A 239 YPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPY 285 (292)
T ss_dssp CCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred cccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCcc
Confidence 00001122346788999999999999999999999998843
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-47 Score=367.45 Aligned_cols=251 Identities=16% Similarity=0.120 Sum_probs=204.9
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEe
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 133 (484)
+.+|++++.||+|+||+||+|.. .+++.||||++...... ..+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 46889999999999999999995 47899999999654332 24568899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC-----
Q 011519 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----- 208 (484)
Q Consensus 134 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~----- 208 (484)
|+++|+|.+++. ....+++..++.++.||+.||.|||+. ||+||||||+|||++.++.+||+|||++.....
T Consensus 86 ~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~LH~~-givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 162 (323)
T 3tki_A 86 YCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGI-GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162 (323)
T ss_dssp CCTTEEGGGGSB--TTTBCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred cCCCCcHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CccccccchHHEEEeCCCCEEEEEeeccceeccCCccc
Confidence 999999999996 445699999999999999999999999 999999999999999999999999999976432
Q ss_pred -CCcccCCCCCCCcccccCCCC-CCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHH
Q 011519 209 -GRSYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 286 (484)
Q Consensus 209 -~~~~~~t~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 286 (484)
.....||+.|+|||++.+..+ +.++|||||||++|+|++|..||............ ..............+..+.
T Consensus 163 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 239 (323)
T 3tki_A 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD---WKEKKTYLNPWKKIDSAPL 239 (323)
T ss_dssp CBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHH---HHTTCTTSTTGGGSCHHHH
T ss_pred ccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHH---HhcccccCCccccCCHHHH
Confidence 135678999999999987765 77999999999999999999988643221110000 0000011111244567899
Q ss_pred HHHHHHhccCCCCCCChHHHHHHHHh
Q 011519 287 RLASRCLQYEPRERPNPRSLVTALVT 312 (484)
Q Consensus 287 ~li~~cl~~dp~~Rps~~~il~~l~~ 312 (484)
+|+.+||+.||.+|||+.+++++.+-
T Consensus 240 ~li~~~L~~dP~~R~t~~eil~h~~~ 265 (323)
T 3tki_A 240 ALLHKILVENPSARITIPDIKKDRWY 265 (323)
T ss_dssp HHHHHHSCSSTTTSCCHHHHTTCTTT
T ss_pred HHHHHHccCChhhCcCHHHHhhChhh
Confidence 99999999999999999999988553
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-46 Score=381.94 Aligned_cols=253 Identities=20% Similarity=0.303 Sum_probs=213.1
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCC
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~ 136 (484)
.++++.+.||+|+||+||+|...++..||||+++... ...+.|.+|+.+|++++|||||++++++. .+..+|||||++
T Consensus 188 ~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~ 265 (454)
T 1qcf_A 188 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMA 265 (454)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCT
T ss_pred HHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecC
Confidence 4677888999999999999998888899999998654 35678999999999999999999999986 567899999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-----Cc
Q 011519 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----RS 211 (484)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~-----~~ 211 (484)
+|+|.+++.......+++..++.++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++..... ..
T Consensus 266 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~ 344 (454)
T 1qcf_A 266 KGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR-NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREG 344 (454)
T ss_dssp TCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTCS
T ss_pred CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccCC
Confidence 99999999743344689999999999999999999999 9999999999999999999999999999876432 23
Q ss_pred ccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHH
Q 011519 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (484)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (484)
..+++.|+|||++.+..++.++|||||||++|||+| |+.||.............. ......+..+++.+.+|+.
T Consensus 345 ~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~-----~~~~~~~~~~~~~l~~li~ 419 (454)
T 1qcf_A 345 AKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALER-----GYRMPRPENCPEELYNIMM 419 (454)
T ss_dssp SSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHH-----TCCCCCCTTSCHHHHHHHH
T ss_pred CcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-----CCCCCCCCCCCHHHHHHHH
Confidence 345678999999998889999999999999999999 8888865433222211111 1112234556789999999
Q ss_pred HHhccCCCCCCChHHHHHHHHhhhcCC
Q 011519 291 RCLQYEPRERPNPRSLVTALVTLQKDT 317 (484)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~l~~~~~~~ 317 (484)
+||+.||++|||+.+|+..|+.+....
T Consensus 420 ~cl~~dp~~RPt~~~i~~~L~~~~~~~ 446 (454)
T 1qcf_A 420 RCWKNRPEERPTFEYIQSVLDDFYTAT 446 (454)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHTSSSSS
T ss_pred HHccCChhHCcCHHHHHHHHHHHHhcc
Confidence 999999999999999999999876543
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-46 Score=356.13 Aligned_cols=250 Identities=20% Similarity=0.261 Sum_probs=199.7
Q ss_pred CCCcccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCc----cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEE
Q 011519 55 GFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP----DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (484)
Q Consensus 55 ~f~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 130 (484)
++.+|.+.+.||+|+||+||+|... +..||||+++..... ..+.+.+|+.+++.++||||+++++++...+..++
T Consensus 5 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (271)
T 3dtc_A 5 DFAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCL 83 (271)
T ss_dssp CTTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEE
T ss_pred chhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEE
Confidence 4678889999999999999999974 788999998754322 25678999999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC---cccccccccceeecC--------CCCceeec
Q 011519 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKER---ALYHDLNAYRIVFDD--------DVNPRLSC 199 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~---ivH~Dlkp~Nill~~--------~~~~kl~D 199 (484)
||||+++++|.+++. .+.+++..++.++.|++.||.|||+. | ++||||||+|||++. ++.+||+|
T Consensus 84 v~e~~~~~~L~~~~~---~~~~~~~~~~~i~~~l~~~l~~lH~~-~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~D 159 (271)
T 3dtc_A 84 VMEFARGGPLNRVLS---GKRIPPDILVNWAVQIARGMNYLHDE-AIVPIIHRDLKSSNILILQKVENGDLSNKILKITD 159 (271)
T ss_dssp EEECCTTEEHHHHHT---SSCCCHHHHHHHHHHHHHHHHHHHHS-SSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECC
T ss_pred EEEcCCCCCHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhC-CCCceeecCCchHHEEEecccccccccCcceEEcc
Confidence 999999999999994 45799999999999999999999998 7 899999999999985 77899999
Q ss_pred cCCccccCCC--CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCC
Q 011519 200 FGLMKNSRDG--RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQF 277 (484)
Q Consensus 200 fG~a~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (484)
||++...... ....||+.|+|||.+.+..++.++||||||+++|+|++|+.||.............. .......
T Consensus 160 fg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~----~~~~~~~ 235 (271)
T 3dtc_A 160 FGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAM----NKLALPI 235 (271)
T ss_dssp CCC-------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHT----SCCCCCC
T ss_pred CCcccccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhc----CCCCCCC
Confidence 9999865443 345789999999999988899999999999999999999998875432222111111 1112234
Q ss_pred ChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhh
Q 011519 278 SSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL 313 (484)
Q Consensus 278 ~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~ 313 (484)
+..+++.+.+++.+||+.||.+|||+.+++++|+.+
T Consensus 236 ~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 236 PSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred CcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 455678899999999999999999999999999764
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-46 Score=367.40 Aligned_cols=258 Identities=22% Similarity=0.305 Sum_probs=213.1
Q ss_pred cCCCcccccccCCCCCCceEEEEEeC------CCcEEEEEEecCCCCcc-HHHHHHHHHHHhcCCCCceeeeeeeeeeCC
Q 011519 54 SGFAMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWPD-ARQFLEEARAVGQLRNRRLANLLGCCCEGD 126 (484)
Q Consensus 54 ~~f~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~hpniv~l~~~~~~~~ 126 (484)
-....|++++.||+|+||.||+|... +++.||||+++...... .+.|.+|+.++++++||||+++++++.+.+
T Consensus 44 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 123 (343)
T 1luf_A 44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGK 123 (343)
T ss_dssp CCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred ecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCC
Confidence 34467888899999999999999953 35889999998654333 567999999999999999999999999999
Q ss_pred ceEEEEecCCCCCHHhhhccCC----------------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccc
Q 011519 127 ERLLVAEYMPNDTLAKHLFHWE----------------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 184 (484)
Q Consensus 127 ~~~lv~Ey~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp 184 (484)
..++||||+++|+|.+++.... ...+++.+++.++.||+.||.|||+. |++||||||
T Consensus 124 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~-~ivH~Dlkp 202 (343)
T 1luf_A 124 PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER-KFVHRDLAT 202 (343)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSG
T ss_pred ceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCc
Confidence 9999999999999999997532 25799999999999999999999999 999999999
Q ss_pred cceeecCCCCceeeccCCccccCC------CCcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhh
Q 011519 185 YRIVFDDDVNPRLSCFGLMKNSRD------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHAL 257 (484)
Q Consensus 185 ~Nill~~~~~~kl~DfG~a~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~ 257 (484)
+|||++.++.+||+|||+++.... .....+|+.|+|||++.+..++.++||||||+++|+|+| |..||.....
T Consensus 203 ~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 282 (343)
T 1luf_A 203 RNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAH 282 (343)
T ss_dssp GGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH
T ss_pred ceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCCh
Confidence 999999999999999999876432 234567889999999998889999999999999999999 8888765433
Q ss_pred HHhhhccccccccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhcCC
Q 011519 258 DLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (484)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 317 (484)
.......... .....+..++..+.+|+.+||+.||.+|||+.+++++|+.+....
T Consensus 283 ~~~~~~~~~~-----~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~ 337 (343)
T 1luf_A 283 EEVIYYVRDG-----NILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA 337 (343)
T ss_dssp HHHHHHHHTT-----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred HHHHHHHhCC-----CcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence 2222111111 111234556788999999999999999999999999999987654
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-47 Score=377.82 Aligned_cols=252 Identities=25% Similarity=0.369 Sum_probs=210.2
Q ss_pred CcccccccCCCCCCceEEEEEeC-CCcEEEEEEecCCCCcc-HHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEec
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPD-ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey 134 (484)
.++.+.+.||+|+||+||+|... +++.||||+++...... .+.|.+|+.+|++++||||+++++++...+..++||||
T Consensus 114 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 193 (377)
T 3cbl_A 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMEL 193 (377)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred HHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEc
Confidence 46778889999999999999964 78999999997653222 34688999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCC----
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---- 210 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~---- 210 (484)
+++|+|.+++.. .+..+++..++.++.||+.||.|||+. |++||||||+|||++.++.+||+|||+++......
T Consensus 194 ~~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~ 271 (377)
T 3cbl_A 194 VQGGDFLTFLRT-EGARLRVKTLLQMVGDAAAGMEYLESK-CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAAS 271 (377)
T ss_dssp CTTCBHHHHHHH-HGGGCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECC
T ss_pred CCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CcCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeec
Confidence 999999999964 334689999999999999999999999 99999999999999999999999999998654321
Q ss_pred --cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHH
Q 011519 211 --SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287 (484)
Q Consensus 211 --~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (484)
...+++.|+|||++.++.++.++|||||||++|||+| |..|+............ ........+..+++.+.+
T Consensus 272 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~ 346 (377)
T 3cbl_A 272 GGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFV-----EKGGRLPCPELCPDAVFR 346 (377)
T ss_dssp SSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHH-----HTTCCCCCCTTCCHHHHH
T ss_pred CCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-----HcCCCCCCCCCCCHHHHH
Confidence 1234667999999998889999999999999999998 88777654322221111 111122344556788999
Q ss_pred HHHHHhccCCCCCCChHHHHHHHHhhhc
Q 011519 288 LASRCLQYEPRERPNPRSLVTALVTLQK 315 (484)
Q Consensus 288 li~~cl~~dp~~Rps~~~il~~l~~~~~ 315 (484)
|+.+||+.||++|||+.++++.|+.+.+
T Consensus 347 li~~cl~~dP~~Rps~~~i~~~L~~i~~ 374 (377)
T 3cbl_A 347 LMEQCWAYEPGQRPSFSTIYQELQSIRK 374 (377)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence 9999999999999999999999998764
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-46 Score=357.98 Aligned_cols=255 Identities=18% Similarity=0.276 Sum_probs=202.3
Q ss_pred CCCcccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEec
Q 011519 55 GFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (484)
Q Consensus 55 ~f~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey 134 (484)
++.+|++.+.||+|+||+||+|... ++.||||++... ...+.|.+|+.++++++||||+++++++. +..++||||
T Consensus 6 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~ 80 (307)
T 2eva_A 6 DYKEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEY 80 (307)
T ss_dssp CGGGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEEC
T ss_pred CHhHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEc
Confidence 4567888999999999999999974 678999999753 24567999999999999999999999987 457999999
Q ss_pred CCCCCHHhhhccCCC-CCCCHHHHHHHHHHHHHHHHHhhc---CCCcccccccccceeecCCCC-ceeeccCCccccCCC
Q 011519 135 MPNDTLAKHLFHWET-QPMKWAMRLRVALHIAEALEYCTS---KERALYHDLNAYRIVFDDDVN-PRLSCFGLMKNSRDG 209 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~-~~l~~~~~~~i~~qi~~~L~~lH~---~~~ivH~Dlkp~Nill~~~~~-~kl~DfG~a~~~~~~ 209 (484)
+++|+|.+++..... ..+++..++.++.||+.||.|||+ . |++||||||+|||++.++. +||+|||++......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~-~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~ 159 (307)
T 2eva_A 81 AEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPK-ALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH 159 (307)
T ss_dssp CTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSS-CCCCCCCSGGGEEEETTTTEEEECCCCC-------
T ss_pred CCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCC-CeecCCCChhHEEEeCCCCEEEEcccccccccccc
Confidence 999999999974332 247899999999999999999999 6 8999999999999998887 799999998765432
Q ss_pred -CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHH
Q 011519 210 -RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288 (484)
Q Consensus 210 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 288 (484)
....||+.|+|||++.+..++.++||||||+++|+|+||+.||........... ... ........+..++..+.+|
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~l~~l 236 (307)
T 2eva_A 160 MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM--WAV-HNGTRPPLIKNLPKPIESL 236 (307)
T ss_dssp -----CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHH--HHH-HTTCCCCCBTTCCHHHHHH
T ss_pred cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHH--HHH-hcCCCCCcccccCHHHHHH
Confidence 345689999999999988999999999999999999999998864321111000 000 0011112334556789999
Q ss_pred HHHHhccCCCCCCChHHHHHHHHhhhcCCC
Q 011519 289 ASRCLQYEPRERPNPRSLVTALVTLQKDTE 318 (484)
Q Consensus 289 i~~cl~~dp~~Rps~~~il~~l~~~~~~~~ 318 (484)
+.+||+.||.+|||+.++++.|+.+.....
T Consensus 237 i~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 266 (307)
T 2eva_A 237 MTRCWSKDPSQRPSMEEIVKIMTHLMRYFP 266 (307)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHGGGCC
T ss_pred HHHHhcCChhhCcCHHHHHHHHHHHHHhcc
Confidence 999999999999999999999998876543
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-47 Score=369.97 Aligned_cols=247 Identities=17% Similarity=0.213 Sum_probs=208.1
Q ss_pred CCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCC---CccHHHHHHHHHHHhcC-CCCceeeeeeeeeeCCceE
Q 011519 55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL 129 (484)
Q Consensus 55 ~f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~ 129 (484)
...+|.+++.||+|+||+||+|+. .+++.||||+++... ......+..|..++..+ +||||+++++++.+.+..+
T Consensus 15 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~ 94 (345)
T 1xjd_A 15 KIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLF 94 (345)
T ss_dssp -CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEE
Confidence 356788889999999999999995 568999999997532 12356688999999886 8999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC-
Q 011519 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD- 208 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~- 208 (484)
+||||++||+|.+++.. .+.+++..+..++.||+.||.|||+. ||+||||||+|||++.+|.+||+|||+++....
T Consensus 95 lv~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 171 (345)
T 1xjd_A 95 FVMEYLNGGDLMYHIQS--CHKFDLSRATFYAAEIILGLQFLHSK-GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG 171 (345)
T ss_dssp EEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeCCCChhhEEECCCCCEEEeEChhhhhcccC
Confidence 99999999999999963 35699999999999999999999999 999999999999999999999999999986432
Q ss_pred ---CCcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHH
Q 011519 209 ---GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 285 (484)
Q Consensus 209 ---~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 285 (484)
.....||+.|+|||++.+..++.++|||||||++|||++|..||............... ...++...++++
T Consensus 172 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~ 245 (345)
T 1xjd_A 172 DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMD------NPFYPRWLEKEA 245 (345)
T ss_dssp TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHH
T ss_pred CCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhC------CCCCCcccCHHH
Confidence 24567899999999999989999999999999999999999998765433222111111 123455567899
Q ss_pred HHHHHHHhccCCCCCCChH-HHHHHH
Q 011519 286 VRLASRCLQYEPRERPNPR-SLVTAL 310 (484)
Q Consensus 286 ~~li~~cl~~dp~~Rps~~-~il~~l 310 (484)
.+|+.+||..||.+||++. ++++|-
T Consensus 246 ~~li~~lL~~dp~~R~~~~~~i~~hp 271 (345)
T 1xjd_A 246 KDLLVKLFVREPEKRLGVRGDIRQHP 271 (345)
T ss_dssp HHHHHHHSCSSGGGSBTTBSCGGGSG
T ss_pred HHHHHHHhcCCHhHcCCChHHHHcCc
Confidence 9999999999999999997 777663
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-46 Score=353.87 Aligned_cols=252 Identities=22% Similarity=0.360 Sum_probs=206.3
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCcc-------HHHHHHHHHHHhcCCCCceeeeeeeeeeCCc
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPD-------ARQFLEEARAVGQLRNRRLANLLGCCCEGDE 127 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-------~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~ 127 (484)
-.+|++++.||+|+||+||+|+. .+++.||||++....... .+.+.+|+.++++++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 35788889999999999999995 578999999986544322 167899999999999999999999987655
Q ss_pred eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC--cccccccccceeecCCCC-----ceeecc
Q 011519 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKER--ALYHDLNAYRIVFDDDVN-----PRLSCF 200 (484)
Q Consensus 128 ~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~--ivH~Dlkp~Nill~~~~~-----~kl~Df 200 (484)
++||||+++|+|.+++.. ....+++..++.++.|++.||.|||+. | ++||||||+|||++.++. +||+||
T Consensus 97 -~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~-~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Df 173 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLD-KAHPIKWSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADF 173 (287)
T ss_dssp -EEEEECCTTCBHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHTS-SSCCBCSCCSGGGEEESCCCTTCSCCEEECCC
T ss_pred -eEEEEecCCCCHHHHHhc-ccCCccHHHHHHHHHHHHHHHHHHHhC-CCCeecCCCCcceEEEeccCCCCceeEEeCCC
Confidence 799999999999998864 445799999999999999999999998 8 999999999999987776 999999
Q ss_pred CCccccCCC-CcccCCCCCCCccccc--CCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCC
Q 011519 201 GLMKNSRDG-RSYSTNLAFTPPEYLR--TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQF 277 (484)
Q Consensus 201 G~a~~~~~~-~~~~~t~~y~aPE~~~--~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (484)
|+++..... ....||+.|+|||++. ...++.++||||||+++|+|++|+.||.......... .............
T Consensus 174 g~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~--~~~~~~~~~~~~~ 251 (287)
T 4f0f_A 174 GLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKF--INMIREEGLRPTI 251 (287)
T ss_dssp TTCBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHH--HHHHHHSCCCCCC
T ss_pred CccccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHH--HHHHhccCCCCCC
Confidence 999865543 3467899999999984 4457899999999999999999999886432211100 0111111122334
Q ss_pred ChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhh
Q 011519 278 SSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL 313 (484)
Q Consensus 278 ~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~ 313 (484)
+..+++.+.+|+.+||+.||.+|||+.++++.|+.+
T Consensus 252 ~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 252 PEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred CcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 566678999999999999999999999999999764
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-46 Score=357.67 Aligned_cols=252 Identities=17% Similarity=0.226 Sum_probs=203.1
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCc--cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEec
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey 134 (484)
.+|++++.||+|+||+||+|...+++.||||++...... ..+.+.+|+.+++.++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 578899999999999999999888999999999754322 246789999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----C
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----R 210 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~----~ 210 (484)
+++ +|.+++.. ..+.+++..+..++.||+.||.|||+. ||+||||||+|||++.++.+||+|||++...... .
T Consensus 82 ~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 158 (288)
T 1ob3_A 82 LDQ-DLKKLLDV-CEGGLESVTAKSFLLQLLNGIAYCHDR-RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYT 158 (288)
T ss_dssp CSE-EHHHHHHT-STTCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC------
T ss_pred cCC-CHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEEcCCCCEEEeECccccccCccccccc
Confidence 976 99999864 345699999999999999999999999 9999999999999999999999999998765432 3
Q ss_pred cccCCCCCCCcccccCC-CCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcccc--------------ccc--c---
Q 011519 211 SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ--------------TLT--D--- 270 (484)
Q Consensus 211 ~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~--------------~~~--~--- 270 (484)
...+|+.|+|||++.+. .++.++|||||||++|+|+||..||.............. ... +
T Consensus 159 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (288)
T 1ob3_A 159 HEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNF 238 (288)
T ss_dssp ---CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTC
T ss_pred cccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhccccccccc
Confidence 45679999999999764 589999999999999999999998875422111110000 000 0
Q ss_pred ----ccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 271 ----SCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 271 ----~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
+.....+....++.+.+|+.+||+.||++|||+.++++|-+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~ 283 (288)
T 1ob3_A 239 TVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAY 283 (288)
T ss_dssp CCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGG
T ss_pred ccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCcc
Confidence 00000122345788999999999999999999999998743
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-46 Score=370.92 Aligned_cols=255 Identities=22% Similarity=0.296 Sum_probs=213.0
Q ss_pred CcccccccCCCCCCceEEEEEe--------CCCcEEEEEEecCCCCc-cHHHHHHHHHHHhcC-CCCceeeeeeeeeeCC
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL--------ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQL-RNRRLANLLGCCCEGD 126 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~ 126 (484)
.+|.+.+.||+|+||+||+|.. ..+..||||+++..... ..+++.+|+.+++++ +||||+++++++...+
T Consensus 69 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~ 148 (382)
T 3tt0_A 69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 148 (382)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCC
Confidence 5678889999999999999984 22357999999765433 356799999999999 8999999999999999
Q ss_pred ceEEEEecCCCCCHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCC
Q 011519 127 ERLLVAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 192 (484)
Q Consensus 127 ~~~lv~Ey~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~ 192 (484)
..++||||+++|+|.+++.... ...+++..++.|+.||+.||.|||+. ||+||||||+|||++.+
T Consensus 149 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~ 227 (382)
T 3tt0_A 149 PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-KCIHRDLAARNVLVTED 227 (382)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTT
T ss_pred ceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCcceEEEcCC
Confidence 9999999999999999997533 24599999999999999999999999 99999999999999999
Q ss_pred CCceeeccCCccccCCC------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccc
Q 011519 193 VNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNI 265 (484)
Q Consensus 193 ~~~kl~DfG~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~ 265 (484)
+.+||+|||+++..... ....+|+.|+|||++.+..++.++|||||||++|+|+| |..||.............
T Consensus 228 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~~~~~ 307 (382)
T 3tt0_A 228 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 307 (382)
T ss_dssp CCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHH
T ss_pred CcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence 99999999999865432 23456788999999999899999999999999999999 888876543332221111
Q ss_pred cccccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhcCC
Q 011519 266 QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (484)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 317 (484)
.......+..++.++.+|+.+||+.||++|||+.+++++|+.+....
T Consensus 308 -----~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 354 (382)
T 3tt0_A 308 -----EGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALT 354 (382)
T ss_dssp -----TTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred -----cCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence 11122334556788999999999999999999999999999987543
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-46 Score=361.16 Aligned_cols=257 Identities=14% Similarity=0.139 Sum_probs=208.2
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCC-ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCC--ceEEEE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGD--ERLLVA 132 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~--~~~lv~ 132 (484)
..|.+++.||+|+||+||+|.. .+++.||||+++.... ...+.+.+|+.++++++||||+++++++.... ..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 4688889999999999999995 4689999999975432 23567889999999999999999999988765 779999
Q ss_pred ecCCCCCHHhhhccCC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceee----cCCCCceeeccCCccccC
Q 011519 133 EYMPNDTLAKHLFHWE-TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF----DDDVNPRLSCFGLMKNSR 207 (484)
Q Consensus 133 Ey~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill----~~~~~~kl~DfG~a~~~~ 207 (484)
||+++|+|.+++.... ...+++..++.++.||+.||.|||+. ||+||||||+|||+ +.++.+||+|||+++...
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~ 167 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN-GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE 167 (319)
T ss_dssp ECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECC
T ss_pred eCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCCCHHHEEEeccCCCCceEEEccCCCceecC
Confidence 9999999999997432 23499999999999999999999999 99999999999999 777889999999998765
Q ss_pred CC---CcccCCCCCCCccccc--------CCCCCCCCceeehHHHHHHHhhCCCCCCchhh----HHhhhccccccc---
Q 011519 208 DG---RSYSTNLAFTPPEYLR--------TGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL----DLIRDRNIQTLT--- 269 (484)
Q Consensus 208 ~~---~~~~~t~~y~aPE~~~--------~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~----~~~~~~~~~~~~--- 269 (484)
.. ....||+.|+|||++. +..++.++|||||||++|||+||..||..... ...........+
T Consensus 168 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~ 247 (319)
T 4euu_A 168 DDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGA 247 (319)
T ss_dssp TTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTC
T ss_pred CCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCccc
Confidence 43 3456899999999986 46789999999999999999999988752211 000000000000
Q ss_pred ----------------cccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhh
Q 011519 270 ----------------DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQ 314 (484)
Q Consensus 270 ----------------~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~ 314 (484)
.......++...+..+.+|+.+||+.||++|||+.+++++.....
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~ 308 (319)
T 4euu_A 248 ISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (319)
T ss_dssp CEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred chhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence 001112345678899999999999999999999999999987543
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-46 Score=366.58 Aligned_cols=250 Identities=16% Similarity=0.212 Sum_probs=206.1
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCc---cHHHHHHHHHHHhcC-CCCceeeeeeeeeeCCceEE
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP---DARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLL 130 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~l 130 (484)
..+|++++.||+|+||+||+|+. .+++.||||+++..... ..+.+.+|..++.++ +||||+++++++.+.+..++
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 45788999999999999999995 56899999999764322 245688999999988 89999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC--
Q 011519 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-- 208 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~-- 208 (484)
||||++||+|.+++.. .+.+++..++.++.||+.||.|||+. ||+||||||+|||++.++.+||+|||+++....
T Consensus 88 v~e~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~ 164 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQR--QRKLPEEHARFYSAEISLALNYLHER-GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG 164 (345)
T ss_dssp EECCCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTT
T ss_pred EEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCHHHEEECCCCCEEEEeccccccccCCC
Confidence 9999999999999963 35699999999999999999999999 999999999999999999999999999986322
Q ss_pred --CCcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHh-----hhccccccccccccCCCChHH
Q 011519 209 --GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLI-----RDRNIQTLTDSCLEGQFSSDE 281 (484)
Q Consensus 209 --~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 281 (484)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||........ .......+... ...++...
T Consensus 165 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~--~~~~p~~~ 242 (345)
T 3a8x_A 165 DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK--QIRIPRSL 242 (345)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHC--CCCCCTTS
T ss_pred CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcC--CCCCCCCC
Confidence 2456789999999999998999999999999999999999998854211000 00000011111 12345667
Q ss_pred HHHHHHHHHHHhccCCCCCCCh------HHHHHHH
Q 011519 282 GTELVRLASRCLQYEPRERPNP------RSLVTAL 310 (484)
Q Consensus 282 ~~~l~~li~~cl~~dp~~Rps~------~~il~~l 310 (484)
+..+.+|+.+||+.||.+||++ .++++|-
T Consensus 243 s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp 277 (345)
T 3a8x_A 243 SVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHP 277 (345)
T ss_dssp CHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSG
T ss_pred CHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCC
Confidence 7899999999999999999996 6787773
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-46 Score=372.21 Aligned_cols=252 Identities=19% Similarity=0.153 Sum_probs=210.1
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEec
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey 134 (484)
+..|++++.||+|+||+||+|.. .+++.||+|++..........+.+|+.+|+.++||||+++++++.+....++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 35688999999999999999995 57899999999766544556789999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecC--CCCceeeccCCccccCCC---
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD--DVNPRLSCFGLMKNSRDG--- 209 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~--~~~~kl~DfG~a~~~~~~--- 209 (484)
++||+|.+++.. ....+++..++.++.||+.||.|||+. ||+||||||+|||++. ++.+||+|||+++.....
T Consensus 130 ~~gg~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~-givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~ 207 (387)
T 1kob_A 130 LSGGELFDRIAA-EDYKMSEAEVINYMRQACEGLKHMHEH-SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIV 207 (387)
T ss_dssp CCCCBHHHHTTC-TTCCBCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCE
T ss_pred CCCCcHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHhC-CeeecccchHHeEEecCCCCceEEEecccceecCCCcce
Confidence 999999999964 334699999999999999999999999 9999999999999974 577999999999876543
Q ss_pred CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHH
Q 011519 210 RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289 (484)
Q Consensus 210 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 289 (484)
....||+.|+|||++.+..++.++|||||||++|+|+||..||................. ..........++++.+||
T Consensus 208 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~s~~~~~li 285 (387)
T 1kob_A 208 KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDW--EFDEDAFSSVSPEAKDFI 285 (387)
T ss_dssp EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCC--CCCSSTTTTSCHHHHHHH
T ss_pred eeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC--CCCccccccCCHHHHHHH
Confidence 235789999999999988899999999999999999999999876432221111111000 011122345678899999
Q ss_pred HHHhccCCCCCCChHHHHHHHH
Q 011519 290 SRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 290 ~~cl~~dp~~Rps~~~il~~l~ 311 (484)
.+||..||.+|||+.++++|-+
T Consensus 286 ~~~L~~dP~~Rpt~~ell~hp~ 307 (387)
T 1kob_A 286 KNLLQKEPRKRLTVHDALEHPW 307 (387)
T ss_dssp HTTSCSSGGGSCCHHHHHTSTT
T ss_pred HHHcCCChhHCcCHHHHhhCcc
Confidence 9999999999999999998844
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-46 Score=368.88 Aligned_cols=247 Identities=19% Similarity=0.235 Sum_probs=208.6
Q ss_pred CCCcccccccCCCCCCceEEEEEeC-CCcEEEEEEecCCC---CccHHHHHHHHHHHhcC-CCCceeeeeeeeeeCCceE
Q 011519 55 GFAMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSA---WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL 129 (484)
Q Consensus 55 ~f~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~ 129 (484)
...+|++++.||+|+||+||+|+.. +++.||||+++... ....+.+..|..++..+ +||||+++++++.+.+..+
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 3567889999999999999999954 58899999997532 12356788999999988 7999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC-
Q 011519 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD- 208 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~- 208 (484)
+||||++||+|.+++.. .+.+++..++.++.||+.||.|||+. ||+||||||+|||++.+|.+||+|||+++....
T Consensus 98 lv~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~-givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 174 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQ--VGRFKEPHAVFYAAEIAIGLFFLQSK-GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD 174 (353)
T ss_dssp EEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CEEeccCCHHHEEEcCCCcEEEEeCCcccccccC
Confidence 99999999999999963 35699999999999999999999999 999999999999999999999999999986322
Q ss_pred ---CCcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHH
Q 011519 209 ---GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 285 (484)
Q Consensus 209 ---~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 285 (484)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||............... ...++...++++
T Consensus 175 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~ 248 (353)
T 2i0e_A 175 GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH------NVAYPKSMSKEA 248 (353)
T ss_dssp TCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHH
T ss_pred CcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhC------CCCCCCCCCHHH
Confidence 24567899999999999989999999999999999999999998765433222221111 113455677899
Q ss_pred HHHHHHHhccCCCCCCC-----hHHHHHHH
Q 011519 286 VRLASRCLQYEPRERPN-----PRSLVTAL 310 (484)
Q Consensus 286 ~~li~~cl~~dp~~Rps-----~~~il~~l 310 (484)
.+|+.+||..||.+||+ +.++++|-
T Consensus 249 ~~li~~lL~~dP~~R~~~~~~~~~~i~~h~ 278 (353)
T 2i0e_A 249 VAICKGLMTKHPGKRLGCGPEGERDIKEHA 278 (353)
T ss_dssp HHHHHHHTCSCTTSCTTCSTTHHHHHHTSG
T ss_pred HHHHHHHhhcCHHHcCCCCCCCHHHHhcCc
Confidence 99999999999999995 58888773
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-47 Score=368.57 Aligned_cols=253 Identities=17% Similarity=0.259 Sum_probs=205.6
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcE----EEEEEecCCCC-ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQFR----IAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~----vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 130 (484)
.+|++++.||+|+||+||+|.. .+++. ||+|.+..... .....+.+|+.+++.++||||+++++++. .+..++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 5788899999999999999994 44544 88888764432 23456789999999999999999999886 567899
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-
Q 011519 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 209 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~- 209 (484)
||||+++|+|.+++.. ..+.+++..++.++.||+.||.|||+. ||+||||||+|||++.++.+||+|||+++.....
T Consensus 92 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 169 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQ-HRGALGPQLLLNWGVQIAKGMYYLEEH-GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDD 169 (325)
T ss_dssp EEECCTTCBSHHHHHS-SGGGSCTTHHHHHHHHHHHHHHHHHHT-TCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCT
T ss_pred EEEeCCCCCHHHHHHH-ccccCCHHHHHHHHHHHHHHHHHHHhC-CCCCCccchheEEECCCCeEEECCCCcccccCccc
Confidence 9999999999999964 245789999999999999999999999 9999999999999999999999999999875432
Q ss_pred -----CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHH
Q 011519 210 -----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283 (484)
Q Consensus 210 -----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (484)
....+|+.|+|||++.+..++.++||||||+++|+|+| |..||............ ........+..++.
T Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 244 (325)
T 3kex_A 170 KQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLL-----EKGERLAQPQICTI 244 (325)
T ss_dssp TCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHH-----HTTCBCCCCTTBCT
T ss_pred ccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHH-----HcCCCCCCCCcCcH
Confidence 23456789999999998899999999999999999999 99887654322221111 11111223344566
Q ss_pred HHHHHHHHHhccCCCCCCChHHHHHHHHhhhcCC
Q 011519 284 ELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (484)
Q Consensus 284 ~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 317 (484)
.+.+|+.+||+.||.+|||+.+++++|+.+...+
T Consensus 245 ~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~~ 278 (325)
T 3kex_A 245 DVYMVMVKCWMIDENIRPTFKELANEFTRMARDP 278 (325)
T ss_dssp TTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTSH
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 7899999999999999999999999999987654
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-46 Score=384.77 Aligned_cols=253 Identities=21% Similarity=0.350 Sum_probs=214.5
Q ss_pred CcccccccCCCCCCceEEEEEeC-CCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecC
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~ 135 (484)
.++.+.+.||+|+||.||+|.+. ++..||||+++... ...+.|.+|+.+|++++|||||++++++...+..+|||||+
T Consensus 220 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~ 298 (495)
T 1opk_A 220 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 298 (495)
T ss_dssp GGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred HHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEcc
Confidence 46778889999999999999964 48899999997654 34678999999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-----C
Q 011519 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----R 210 (484)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~-----~ 210 (484)
++|+|.+++.......+++..++.++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++..... .
T Consensus 299 ~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~-~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~ 377 (495)
T 1opk_A 299 TYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK-NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA 377 (495)
T ss_dssp TTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECCT
T ss_pred CCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCChhhEEECCCCcEEEeecccceeccCCceeecC
Confidence 999999999765566799999999999999999999999 9999999999999999999999999999876432 2
Q ss_pred cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHH
Q 011519 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289 (484)
Q Consensus 211 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 289 (484)
...+++.|+|||++.+..++.++|||||||++|||+| |..|+.......... ..........+..+++.+.+||
T Consensus 378 ~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~li 452 (495)
T 1opk_A 378 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE-----LLEKDYRMERPEGCPEKVYELM 452 (495)
T ss_dssp TCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHH-----HHHTTCCCCCCTTCCHHHHHHH
T ss_pred CCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHH-----HHHcCCCCCCCCCCCHHHHHHH
Confidence 2345678999999998889999999999999999999 887776543221111 1111222234556778999999
Q ss_pred HHHhccCCCCCCChHHHHHHHHhhhcC
Q 011519 290 SRCLQYEPRERPNPRSLVTALVTLQKD 316 (484)
Q Consensus 290 ~~cl~~dp~~Rps~~~il~~l~~~~~~ 316 (484)
.+||+.||.+|||+.+|++.|+.+...
T Consensus 453 ~~cl~~dP~~RPs~~el~~~L~~~~~~ 479 (495)
T 1opk_A 453 RACWQWNPSDRPSFAEIHQAFETMFQE 479 (495)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHTSCSS
T ss_pred HHHcCcChhHCcCHHHHHHHHHHHHhc
Confidence 999999999999999999999987543
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-46 Score=358.17 Aligned_cols=249 Identities=17% Similarity=0.222 Sum_probs=198.3
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhc--CCCCceeeeeeeeeeC----CceEE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQ--LRNRRLANLLGCCCEG----DERLL 130 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~hpniv~l~~~~~~~----~~~~l 130 (484)
.+|.+++.||+|+||+||+|+. +++.||||++... ....+.+|.+++.. ++||||+++++++... ...++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~l 83 (301)
T 3q4u_A 8 RDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWL 83 (301)
T ss_dssp GGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred CcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEE
Confidence 4678889999999999999998 6889999999643 34566777777766 7899999999987543 45899
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhh--------cCCCcccccccccceeecCCCCceeeccCC
Q 011519 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCT--------SKERALYHDLNAYRIVFDDDVNPRLSCFGL 202 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH--------~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~ 202 (484)
||||+++|+|.+++. ...+++..++.++.||+.||.||| +. +|+||||||+|||++.++.+||+|||+
T Consensus 84 v~e~~~~g~L~~~l~---~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~-~ivH~Dlkp~Nill~~~~~~kl~Dfg~ 159 (301)
T 3q4u_A 84 ITHYHEMGSLYDYLQ---LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP-AIAHRDLKSKNILVKKNGQCCIADLGL 159 (301)
T ss_dssp EECCCTTCBHHHHHT---TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC-EEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred ehhhccCCCHHHHHh---hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC-CeecCCCChHhEEEcCCCCEEEeeCCC
Confidence 999999999999994 457999999999999999999999 87 999999999999999999999999999
Q ss_pred ccccCCC--------CcccCCCCCCCcccccCC------CCCCCCceeehHHHHHHHhhC----------CCCCCchhh-
Q 011519 203 MKNSRDG--------RSYSTNLAFTPPEYLRTG------RVTPESVMYSFGTLLLDLLSG----------KHIPPSHAL- 257 (484)
Q Consensus 203 a~~~~~~--------~~~~~t~~y~aPE~~~~~------~~~~~~Dv~slG~~l~el~tg----------~~p~~~~~~- 257 (484)
++..... ....||+.|+|||++.+. .++.++|||||||++|||+|| ..||.....
T Consensus 160 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~ 239 (301)
T 3q4u_A 160 AVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPN 239 (301)
T ss_dssp CEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCS
T ss_pred eeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCC
Confidence 8764432 234789999999999876 455799999999999999999 666643211
Q ss_pred ----HHhhhcc-ccccccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhh
Q 011519 258 ----DLIRDRN-IQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTL 313 (484)
Q Consensus 258 ----~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~ 313 (484)
....... .............+...+..+.+|+.+||+.||.+|||+.++++.|+.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 240 DPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp SCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred CcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 1111000 0000011111112345778999999999999999999999999999875
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-46 Score=371.91 Aligned_cols=254 Identities=14% Similarity=0.136 Sum_probs=204.6
Q ss_pred CCcccccccCCCC--CCceEEEEEe-CCCcEEEEEEecCCCCc--cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEE
Q 011519 56 FAMENIVSEHGEK--APNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (484)
Q Consensus 56 f~~~~~~~~lG~G--~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 130 (484)
-.+|++++.||+| +||+||+|+. .+++.||||++...... ..+.+.+|+.+++.++|||||++++++.+.+..++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 3578899999999 9999999995 47999999999754322 24568889999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC--
Q 011519 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-- 208 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~-- 208 (484)
||||+++|+|.+++.......+++..+..++.||+.||.|||+. ||+||||||+|||++.++.+||+|||++.....
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~ 182 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHM-GYVHRSVKASHILISVDGKVYLSGLRSNLSMISHG 182 (389)
T ss_dssp EEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTCCEEECCGGGCEECEETT
T ss_pred EEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEcCCCCEEEcccccceeecccc
Confidence 99999999999999765556799999999999999999999999 999999999999999999999999998754321
Q ss_pred ---------CCcccCCCCCCCcccccC--CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcccccccc-------
Q 011519 209 ---------GRSYSTNLAFTPPEYLRT--GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTD------- 270 (484)
Q Consensus 209 ---------~~~~~~t~~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~------- 270 (484)
.....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||..................
T Consensus 183 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (389)
T 3gni_B 183 QRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTST 262 (389)
T ss_dssp EECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC-------------
T ss_pred ccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccccccc
Confidence 123468899999999987 56899999999999999999999988643211111000000000
Q ss_pred ---------------------------------ccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHH
Q 011519 271 ---------------------------------SCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 271 ---------------------------------~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 310 (484)
......++...++.+.+||.+||+.||.+|||+.++++|-
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp 335 (389)
T 3gni_B 263 IPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHS 335 (389)
T ss_dssp -------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSG
T ss_pred cccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCH
Confidence 0000112344567899999999999999999999999883
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-46 Score=364.93 Aligned_cols=250 Identities=19% Similarity=0.223 Sum_probs=208.2
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCcc---HHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEe
Q 011519 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD---ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 133 (484)
.|.+++.||+|+||+||+|. ..+++.||||++....... .+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 55 ~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 134 (348)
T 1u5q_A 55 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME 134 (348)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred heeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEe
Confidence 36778889999999999999 4679999999997653322 4578999999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCCccc
Q 011519 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYS 213 (484)
Q Consensus 134 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 213 (484)
|+. |+|.+++.. ....+++..+..++.||+.||.|||+. ||+||||||+|||++.++.+||+|||++..........
T Consensus 135 ~~~-g~l~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~ 211 (348)
T 1u5q_A 135 YCL-GSASDLLEV-HKKPLQEVEIAAVTHGALQGLAYLHSH-NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFV 211 (348)
T ss_dssp CCS-EEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCC
T ss_pred cCC-CCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCCHHHEEECCCCCEEEeeccCceecCCCCccc
Confidence 997 588888853 345799999999999999999999999 99999999999999999999999999999887777788
Q ss_pred CCCCCCCccccc---CCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHH
Q 011519 214 TNLAFTPPEYLR---TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (484)
Q Consensus 214 ~t~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (484)
||+.|+|||++. ++.++.++|||||||++|||+||+.||............... ......+...+..+.+|+.
T Consensus 212 gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~li~ 287 (348)
T 1u5q_A 212 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN----ESPALQSGHWSEYFRNFVD 287 (348)
T ss_dssp SCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS----CCCCCCCTTSCHHHHHHHH
T ss_pred CCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc----CCCCCCCCCCCHHHHHHHH
Confidence 999999999985 466899999999999999999999887653221111111111 1111123345678999999
Q ss_pred HHhccCCCCCCChHHHHHHHHhhh
Q 011519 291 RCLQYEPRERPNPRSLVTALVTLQ 314 (484)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~l~~~~ 314 (484)
+||+.||++|||+.+++++.+-..
T Consensus 288 ~~l~~dP~~Rps~~~ll~h~~~~~ 311 (348)
T 1u5q_A 288 SCLQKIPQDRPTSEVLLKHRFVLR 311 (348)
T ss_dssp HHTCSSGGGSCCHHHHTTCHHHHS
T ss_pred HHcccChhhCcCHHHHhhChhhhc
Confidence 999999999999999999876543
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-47 Score=372.65 Aligned_cols=255 Identities=20% Similarity=0.282 Sum_probs=208.0
Q ss_pred CCcccccccCCCCCCceEEEEEe------CCCcEEEEEEecCCCCc-cHHHHHHHHHHHhcC-CCCceeeeeeeeeeCCc
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQL-RNRRLANLLGCCCEGDE 127 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~ 127 (484)
..+|++++.||+|+||.||+|.+ .+++.||||+++..... ..+.+.+|+.++.++ +||||+++++++.+.+.
T Consensus 21 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 100 (359)
T 3vhe_A 21 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 100 (359)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTS
T ss_pred ccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCC
Confidence 35678889999999999999973 34688999999865433 346799999999999 79999999999987654
Q ss_pred -eEEEEecCCCCCHHhhhccCCC---------------------------------------------------------
Q 011519 128 -RLLVAEYMPNDTLAKHLFHWET--------------------------------------------------------- 149 (484)
Q Consensus 128 -~~lv~Ey~~~gsL~~~l~~~~~--------------------------------------------------------- 149 (484)
.++||||+++|+|.+++.....
T Consensus 101 ~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (359)
T 3vhe_A 101 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 180 (359)
T ss_dssp CCEEEEECCTTEEHHHHHHTTTTSBCSCC---------------------------------------------------
T ss_pred ceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcc
Confidence 8999999999999999975322
Q ss_pred -------CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC------CcccCCC
Q 011519 150 -------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG------RSYSTNL 216 (484)
Q Consensus 150 -------~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~------~~~~~t~ 216 (484)
..+++..++.++.||+.||.|||+. ||+||||||+|||++.++.+||+|||++...... ....+|+
T Consensus 181 ~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~-~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~ 259 (359)
T 3vhe_A 181 APEDLYKDFLTLEHLICYSFQVAKGMEFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 259 (359)
T ss_dssp ---CTTTTCBCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECG
T ss_pred cccchhccccCHHHHHHHHHHHHHHHHHHHHC-CcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCc
Confidence 1289999999999999999999999 9999999999999999999999999999865332 2345678
Q ss_pred CCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHHhcc
Q 011519 217 AFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQY 295 (484)
Q Consensus 217 ~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 295 (484)
.|+|||++.+..++.++|||||||++|||+| |..||............. ........+...++.+.+++..||+.
T Consensus 260 ~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~li~~~l~~ 335 (359)
T 3vhe_A 260 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL----KEGTRMRAPDYTTPEMYQTMLDCWHG 335 (359)
T ss_dssp GGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHH----HHTCCCCCCTTCCHHHHHHHHHHTCS
T ss_pred eeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHH----HcCCCCCCCCCCCHHHHHHHHHHccC
Confidence 8999999998889999999999999999998 998876542211111111 11112233455678899999999999
Q ss_pred CCCCCCChHHHHHHHHhhhc
Q 011519 296 EPRERPNPRSLVTALVTLQK 315 (484)
Q Consensus 296 dp~~Rps~~~il~~l~~~~~ 315 (484)
||.+|||+.+++++|+.+..
T Consensus 336 dP~~Rps~~ell~~L~~~~~ 355 (359)
T 3vhe_A 336 EPSQRPTFSELVEHLGNLLQ 355 (359)
T ss_dssp SGGGSCCHHHHHHHHHHHHH
T ss_pred ChhhCCCHHHHHHHHHHHHH
Confidence 99999999999999998764
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-46 Score=366.48 Aligned_cols=259 Identities=21% Similarity=0.266 Sum_probs=212.3
Q ss_pred CcccccccCCCCCCceEEEEEe-----CCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeee--eCCceE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCC--EGDERL 129 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~--~~~~~~ 129 (484)
..|++++.||+|+||+||+|.. .+++.||||++........+.+.+|+.++++++||||+++++++. .....+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 102 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR 102 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence 4788899999999999999983 468899999998766555677999999999999999999999986 456689
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC
Q 011519 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 209 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 209 (484)
+||||+++++|.+++... ...+++..++.++.||+.||.|||+. |++||||||+|||++.++.+||+|||++......
T Consensus 103 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~-~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~ 180 (327)
T 3lxl_A 103 LVMEYLPSGCLRDFLQRH-RARLDASRLLLYSSQICKGMEYLGSR-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLD 180 (327)
T ss_dssp EEEECCTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEEETTEEEECCGGGCEECCTT
T ss_pred EEEeecCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCChhhEEECCCCCEEEcccccceecccC
Confidence 999999999999999642 34699999999999999999999999 9999999999999999999999999999875432
Q ss_pred -------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhc----------ccccccccc
Q 011519 210 -------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR----------NIQTLTDSC 272 (484)
Q Consensus 210 -------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~----------~~~~~~~~~ 272 (484)
....+|+.|+|||++.+..++.++||||||+++|+|++|..||........... .........
T Consensus 181 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (327)
T 3lxl_A 181 KDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEG 260 (327)
T ss_dssp CSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTT
T ss_pred CccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhcc
Confidence 234567789999999988899999999999999999999988765433222111 011111111
Q ss_pred ccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhcCC
Q 011519 273 LEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (484)
Q Consensus 273 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 317 (484)
.....+..+++.+.+|+.+||+.||.+|||+.+++++|+.+....
T Consensus 261 ~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 305 (327)
T 3lxl_A 261 QRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGS 305 (327)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC----
T ss_pred cCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 223345667789999999999999999999999999999887654
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-46 Score=369.65 Aligned_cols=249 Identities=19% Similarity=0.157 Sum_probs=201.3
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCCC
Q 011519 59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPN 137 (484)
Q Consensus 59 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~~ 137 (484)
+...+.||+|+||.||+|.. .+|+.||||+++.......+.+.+|+.++++++||||+++++++...+..+|||||+++
T Consensus 91 ~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~ 170 (373)
T 2x4f_A 91 VSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDG 170 (373)
T ss_dssp EEEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred eecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCC
Confidence 33356789999999999994 57899999999876555667899999999999999999999999999999999999999
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceee--cCCCCceeeccCCccccCCC---Ccc
Q 011519 138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF--DDDVNPRLSCFGLMKNSRDG---RSY 212 (484)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill--~~~~~~kl~DfG~a~~~~~~---~~~ 212 (484)
|+|.+++.. ....+++..++.++.||+.||.|||+. ||+||||||+|||+ +.++.+||+|||+++..... ...
T Consensus 171 ~~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~~~ 248 (373)
T 2x4f_A 171 GELFDRIID-ESYNLTELDTILFMKQICEGIRHMHQM-YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVN 248 (373)
T ss_dssp CEEHHHHHH-TGGGCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCCCC
T ss_pred CcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccccccc
Confidence 999998864 334699999999999999999999999 99999999999999 56788999999999876543 345
Q ss_pred cCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHH
Q 011519 213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRC 292 (484)
Q Consensus 213 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 292 (484)
.||+.|+|||++.+..++.++|||||||++|||++|..||.................. .........++++.+||.+|
T Consensus 249 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~li~~~ 326 (373)
T 2x4f_A 249 FGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWD--LEDEEFQDISEEAKEFISKL 326 (373)
T ss_dssp CSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCC--SCSGGGTTSCHHHHHHHHTT
T ss_pred cCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC--CChhhhccCCHHHHHHHHHH
Confidence 6899999999999888999999999999999999999998764332221111111000 00011134568899999999
Q ss_pred hccCCCCCCChHHHHHHHH
Q 011519 293 LQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 293 l~~dp~~Rps~~~il~~l~ 311 (484)
|+.||.+|||+.++++|-+
T Consensus 327 L~~dp~~Rps~~e~l~hp~ 345 (373)
T 2x4f_A 327 LIKEKSWRISASEALKHPW 345 (373)
T ss_dssp SCSSGGGSCCHHHHHHSHH
T ss_pred cCCChhhCCCHHHHhcCcC
Confidence 9999999999999999743
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-46 Score=350.49 Aligned_cols=252 Identities=21% Similarity=0.313 Sum_probs=213.1
Q ss_pred CCcccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecC
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~ 135 (484)
.++|.+++.||+|+||.||+|...+++.||||++..... ..+.+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM 85 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence 467888999999999999999988888999999986543 3567999999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-----C
Q 011519 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----R 210 (484)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~-----~ 210 (484)
++++|.+++.. ....+++..++.++.|++.||.|||+. |++|+||||+||+++.++.+||+|||++...... .
T Consensus 86 ~~~~L~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 163 (267)
T 3t9t_A 86 EHGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEA-CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 163 (267)
T ss_dssp TTCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTT
T ss_pred CCCcHHHHHhh-CcccCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCchheEEECCCCCEEEcccccccccccccccccc
Confidence 99999999965 345689999999999999999999999 9999999999999999999999999998865432 3
Q ss_pred cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHH
Q 011519 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289 (484)
Q Consensus 211 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 289 (484)
...+++.|+|||++.+..++.++||||||+++|+|++ |..||............... .....+...+..+.+++
T Consensus 164 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~-----~~~~~~~~~~~~l~~li 238 (267)
T 3t9t_A 164 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG-----FRLYKPRLASTHVYQIM 238 (267)
T ss_dssp STTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTT-----CCCCCCTTSCHHHHHHH
T ss_pred cccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcC-----CcCCCCccCcHHHHHHH
Confidence 3456778999999998889999999999999999999 78777644322221111111 11123444568899999
Q ss_pred HHHhccCCCCCCChHHHHHHHHhhhc
Q 011519 290 SRCLQYEPRERPNPRSLVTALVTLQK 315 (484)
Q Consensus 290 ~~cl~~dp~~Rps~~~il~~l~~~~~ 315 (484)
.+||+.||.+|||+.+++++|+.+.+
T Consensus 239 ~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 239 NHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHccCChhhCcCHHHHHHHHHHHHh
Confidence 99999999999999999999998865
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-46 Score=378.39 Aligned_cols=253 Identities=24% Similarity=0.334 Sum_probs=208.7
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCC
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~ 136 (484)
..+.+.+.||+|+||+||+|.+.++..||||+++... ...+.|.+|+.+|++++||||+++++++.+ +..+|||||++
T Consensus 184 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~ 261 (452)
T 1fmk_A 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMS 261 (452)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCT
T ss_pred hHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhc
Confidence 4577888899999999999998888889999998654 345789999999999999999999999876 67899999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-----Cc
Q 011519 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----RS 211 (484)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~-----~~ 211 (484)
+|+|.+++....+..+++..++.++.||+.||.|||++ +++||||||+|||++.++.+||+|||+++..... ..
T Consensus 262 ~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~-~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 340 (452)
T 1fmk_A 262 KGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM-NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 340 (452)
T ss_dssp TCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECGGGCEEECCCCTTC------------
T ss_pred CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCChhhEEECCCCCEEECCCccceecCCCceecccC
Confidence 99999999743445699999999999999999999999 9999999999999999999999999999875432 22
Q ss_pred ccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHH
Q 011519 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (484)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (484)
..+++.|+|||++.+..++.++||||||+++|||+| |..|+............. ...+...+..+++.+.+|+.
T Consensus 341 ~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~-----~~~~~~~~~~~~~~l~~li~ 415 (452)
T 1fmk_A 341 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE-----RGYRMPCPPECPESLHDLMC 415 (452)
T ss_dssp --CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH-----TTCCCCCCTTSCHHHHHHHH
T ss_pred CcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-----cCCCCCCCCCCCHHHHHHHH
Confidence 345678999999998899999999999999999999 888876543222211111 11122345566789999999
Q ss_pred HHhccCCCCCCChHHHHHHHHhhhcCC
Q 011519 291 RCLQYEPRERPNPRSLVTALVTLQKDT 317 (484)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~l~~~~~~~ 317 (484)
+||+.||++|||+.++++.|+.+....
T Consensus 416 ~cl~~dP~~Rpt~~~l~~~L~~~~~~~ 442 (452)
T 1fmk_A 416 QCWRKEPEERPTFEYLQAFLEDYFTST 442 (452)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred HHccCChhhCcCHHHHHHHHHHHhccC
Confidence 999999999999999999999876543
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-46 Score=365.23 Aligned_cols=250 Identities=18% Similarity=0.180 Sum_probs=205.1
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCC-----CccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEE
Q 011519 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA-----WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 131 (484)
.|++++.||+|+||+||+|.. .+++.||||++.... ....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 25 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv 104 (351)
T 3c0i_A 25 VYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMV 104 (351)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred ceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 688899999999999999994 578999999985321 12356799999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCC---ceeeccCCcccc
Q 011519 132 AEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN---PRLSCFGLMKNS 206 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~---~kl~DfG~a~~~ 206 (484)
|||++||+|.+++... .+..+++..+..++.||+.||.|||+. ||+||||||+|||++.++. +||+|||++...
T Consensus 105 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~ 183 (351)
T 3c0i_A 105 FEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN-NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL 183 (351)
T ss_dssp EECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECSSSTTCCEEECCCTTCEEC
T ss_pred EeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCChHHeEEecCCCCCcEEEecCcceeEe
Confidence 9999999999888532 234689999999999999999999999 9999999999999986654 999999999876
Q ss_pred CCC----CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHH
Q 011519 207 RDG----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG 282 (484)
Q Consensus 207 ~~~----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (484)
... ....||+.|+|||++.+..++.++|||||||++|+|++|..||.......... ........ ........+
T Consensus 184 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~-i~~~~~~~--~~~~~~~~s 260 (351)
T 3c0i_A 184 GESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEG-IIKGKYKM--NPRQWSHIS 260 (351)
T ss_dssp CTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHHHHHH-HHHTCCCC--CHHHHTTSC
T ss_pred cCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHHHHHH-HHcCCCCC--CccccccCC
Confidence 543 34578999999999998889999999999999999999999987643222111 10000000 000012346
Q ss_pred HHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 283 TELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 283 ~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
..+.+|+.+||..||++|||+.++++|-+
T Consensus 261 ~~~~~li~~~L~~dP~~R~s~~e~l~hp~ 289 (351)
T 3c0i_A 261 ESAKDLVRRMLMLDPAERITVYEALNHPW 289 (351)
T ss_dssp HHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred HHHHHHHHHHCCCChhHCcCHHHHhcChh
Confidence 78999999999999999999999998854
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-46 Score=362.43 Aligned_cols=247 Identities=17% Similarity=0.203 Sum_probs=201.0
Q ss_pred CCcccccccCCCCCCceEEEEEe----CCCcEEEEEEecCCCC----ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCc
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKL----ENQFRIAVKRFNRSAW----PDARQFLEEARAVGQLRNRRLANLLGCCCEGDE 127 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~ 127 (484)
..+|++++.||+|+||+||++.. .+++.||||+++.... .....+.+|+.+|+.++||||+++++++...+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 35788999999999999999995 4789999999976532 234568899999999999999999999999999
Q ss_pred eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccC
Q 011519 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 207 (484)
Q Consensus 128 ~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~ 207 (484)
.++||||++||+|.+++.. .+.+++..+..++.||+.||.|||+. ||+||||||+|||++.++.+||+|||+++...
T Consensus 96 ~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~lH~~-~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~ 172 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLER--EGIFMEDTACFYLAEISMALGHLHQK-GIIYRDLKPENIMLNHQGHVKLTDFGLCKESI 172 (327)
T ss_dssp EEEEEECCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCTTTEEECTTSCEEECCCSCC----
T ss_pred EEEEEeCCCCCcHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhC-CEEcccCCHHHeEECCCCcEEEEeCCcccccc
Confidence 9999999999999999963 45689999999999999999999999 99999999999999999999999999987643
Q ss_pred C----CCcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHH
Q 011519 208 D----GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283 (484)
Q Consensus 208 ~----~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (484)
. .....||+.|+|||++.+..++.++|||||||++|+|++|..||............... ...++...+.
T Consensus 173 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~------~~~~p~~~~~ 246 (327)
T 3a62_A 173 HDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKC------KLNLPPYLTQ 246 (327)
T ss_dssp ------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHT------CCCCCTTSCH
T ss_pred cCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhC------CCCCCCCCCH
Confidence 2 23467899999999999888999999999999999999999998764332222111111 1124455678
Q ss_pred HHHHHHHHHhccCCCCCC-----ChHHHHHHHH
Q 011519 284 ELVRLASRCLQYEPRERP-----NPRSLVTALV 311 (484)
Q Consensus 284 ~l~~li~~cl~~dp~~Rp-----s~~~il~~l~ 311 (484)
.+.+|+.+||..||.+|| ++.++++|-+
T Consensus 247 ~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~ 279 (327)
T 3a62_A 247 EARDLLKKLLKRNAASRLGAGPGDAGEVQAHPF 279 (327)
T ss_dssp HHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGG
T ss_pred HHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCc
Confidence 999999999999999999 7889998844
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-46 Score=373.38 Aligned_cols=258 Identities=17% Similarity=0.138 Sum_probs=211.1
Q ss_pred HHHHhcCCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCC---CccHHHHHHHHHHHhcCCCCceeeeeeeeee
Q 011519 49 LRTATSGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCE 124 (484)
Q Consensus 49 ~~~~~~~f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 124 (484)
+....-...+|++++.||+|+||+||+|+. .+++.||||+++... ......+.+|+.++..++|||||++++++.+
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 140 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 140 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence 334444567889999999999999999995 568999999986421 1123458899999999999999999999999
Q ss_pred CCceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCcc
Q 011519 125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK 204 (484)
Q Consensus 125 ~~~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~ 204 (484)
.+..+|||||++||+|.+++.. ..+++..+..++.||+.||.|||+. ||+||||||+|||++.+|.+||+|||+++
T Consensus 141 ~~~~~lV~E~~~gg~L~~~l~~---~~~~e~~~~~~~~qi~~aL~~LH~~-givHrDLKp~NILl~~~g~ikL~DFG~a~ 216 (410)
T 3v8s_A 141 DRYLYMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIHSM-GFIHRDVKPDNMLLDKSGHLKLADFGTCM 216 (410)
T ss_dssp SSEEEEEECCCTTEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred CCEEEEEEeCCCCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC-CeEeccCCHHHeeECCCCCEEEeccceeE
Confidence 9999999999999999999953 4589999999999999999999999 99999999999999999999999999998
Q ss_pred ccCCC-----CcccCCCCCCCcccccCCC----CCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccC
Q 011519 205 NSRDG-----RSYSTNLAFTPPEYLRTGR----VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEG 275 (484)
Q Consensus 205 ~~~~~-----~~~~~t~~y~aPE~~~~~~----~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 275 (484)
..... ....||+.|+|||++.+.. ++.++|||||||++|||+||+.||.................. ...
T Consensus 217 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~--~~~ 294 (410)
T 3v8s_A 217 KMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNS--LTF 294 (410)
T ss_dssp ECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHH--CCC
T ss_pred eeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhcccc--ccC
Confidence 76543 3567999999999998655 789999999999999999999998765433222222111100 010
Q ss_pred CCChHHHHHHHHHHHHHhccCCCC--CCChHHHHHHHHh
Q 011519 276 QFSSDEGTELVRLASRCLQYEPRE--RPNPRSLVTALVT 312 (484)
Q Consensus 276 ~~~~~~~~~l~~li~~cl~~dp~~--Rps~~~il~~l~~ 312 (484)
.....++.++.+||.+||..+|.+ ||++.+|++|-+-
T Consensus 295 p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f 333 (410)
T 3v8s_A 295 PDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFF 333 (410)
T ss_dssp CTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGG
T ss_pred CCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcCccc
Confidence 112245688999999999999988 9999999999543
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-46 Score=360.08 Aligned_cols=253 Identities=21% Similarity=0.297 Sum_probs=211.0
Q ss_pred CcccccccCCCCCCceEEEEEe------CCCcEEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 129 (484)
..|.+.+.||+|+||.||+|.. .+++.||||+++..... ..+.+.+|+.+++.++||||+++++++.+.+..+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 102 (314)
T 2ivs_A 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLL 102 (314)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCE
T ss_pred hheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceE
Confidence 5678889999999999999984 24578999999765432 3567999999999999999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCCC----------------------CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccce
Q 011519 130 LVAEYMPNDTLAKHLFHWET----------------------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRI 187 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~~~~----------------------~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Ni 187 (484)
+||||+++|+|.+++..... ..+++..++.++.||+.||.|||+. |++||||||+||
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~dikp~NI 181 (314)
T 2ivs_A 103 LIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM-KLVHRDLAARNI 181 (314)
T ss_dssp EEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGE
T ss_pred EEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC-CCcccccchheE
Confidence 99999999999999975322 3489999999999999999999999 999999999999
Q ss_pred eecCCCCceeeccCCccccCCC------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHh
Q 011519 188 VFDDDVNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLI 260 (484)
Q Consensus 188 ll~~~~~~kl~DfG~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~ 260 (484)
|++.++.+||+|||++...... ....+|+.|+|||++.+..++.++||||||+++|+|+| |..||........
T Consensus 182 li~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~ 261 (314)
T 2ivs_A 182 LVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERL 261 (314)
T ss_dssp EEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH
T ss_pred EEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 9999999999999999865432 23456788999999998889999999999999999999 8888765432222
Q ss_pred hhccccccccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhc
Q 011519 261 RDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 315 (484)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~ 315 (484)
... .........+..+++.+.+|+.+||+.||.+|||+.+++++|+.+..
T Consensus 262 ~~~-----~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 311 (314)
T 2ivs_A 262 FNL-----LKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311 (314)
T ss_dssp HHH-----HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHH-----hhcCCcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 111 11111223445667899999999999999999999999999998754
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-46 Score=366.01 Aligned_cols=253 Identities=18% Similarity=0.274 Sum_probs=203.5
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCc----EEEEEEecCCCC-ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQF----RIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 130 (484)
.+|++++.||+|+||+||+|+. .+++ .||+|.+..... ...+.|.+|+.++++++||||+++++++.... .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~ 93 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEE
Confidence 4678889999999999999994 4444 368888864432 34678999999999999999999999998754 789
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-
Q 011519 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 209 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~- 209 (484)
|+||+++|+|.+++.. ....+++..++.|+.||+.||.|||+. ||+||||||+|||++.++.+||+|||+++.....
T Consensus 94 v~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~ 171 (327)
T 3poz_A 94 ITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171 (327)
T ss_dssp EEECCTTCBHHHHHHH-STTSCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTC
T ss_pred EEEecCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhC-CeeCCCCChheEEECCCCCEEEccCcceeEccCCc
Confidence 9999999999999975 345699999999999999999999999 9999999999999999999999999999865432
Q ss_pred -----CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHH
Q 011519 210 -----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283 (484)
Q Consensus 210 -----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (484)
....+|+.|+|||++.+..++.++|||||||++|||+| |..||......... ...........+..++.
T Consensus 172 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 246 (327)
T 3poz_A 172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-----SILEKGERLPQPPICTI 246 (327)
T ss_dssp C-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHH-----HHHHTTCCCCCCTTBCH
T ss_pred ccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHH-----HHHHcCCCCCCCccCCH
Confidence 23345778999999999999999999999999999999 88887654322211 11111112234455678
Q ss_pred HHHHHHHHHhccCCCCCCChHHHHHHHHhhhcCC
Q 011519 284 ELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (484)
Q Consensus 284 ~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 317 (484)
.+.+|+.+||+.||.+|||+.+++++|+.+...+
T Consensus 247 ~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~~ 280 (327)
T 3poz_A 247 DVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 280 (327)
T ss_dssp HHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTSH
T ss_pred HHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhhh
Confidence 8999999999999999999999999999887653
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-46 Score=361.99 Aligned_cols=254 Identities=17% Similarity=0.216 Sum_probs=200.2
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCcc---HHHHHHHHHHHhcCCCCceeeeeeeeeeCCc----e
Q 011519 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD---ARQFLEEARAVGQLRNRRLANLLGCCCEGDE----R 128 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~----~ 128 (484)
..|++++.||+|+||+||+|. ..+++.||||+++...... ...+.+|+.++.+++||||+++++++..... .
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 91 (311)
T 3ork_A 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 91 (311)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred CcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCccc
Confidence 578899999999999999999 4678999999997654333 4578999999999999999999999876554 3
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC
Q 011519 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 208 (484)
Q Consensus 129 ~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~ 208 (484)
++||||++||+|.+++.. .+.+++..++.++.||+.||.|||+. ||+||||||+|||++.++.+||+|||++.....
T Consensus 92 ~lv~e~~~g~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 168 (311)
T 3ork_A 92 YIVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADACQALNFSHQN-GIIHRDVKPANIMISATNAVKVMDFGIARAIAD 168 (311)
T ss_dssp EEEEECCCEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEEETTSCEEECCCSCC-----
T ss_pred EEEEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CCCcCCCCHHHEEEcCCCCEEEeeccCcccccc
Confidence 999999999999999963 45799999999999999999999999 999999999999999999999999999976543
Q ss_pred C-------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHH
Q 011519 209 G-------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 281 (484)
Q Consensus 209 ~-------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (484)
. ....||+.|+|||++.+..++.++||||||+++|+|+||+.||................... ........
T Consensus 169 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 246 (311)
T 3ork_A 169 SGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIP--PSARHEGL 246 (311)
T ss_dssp -------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCC--HHHHSTTC
T ss_pred cccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCC--cccccCCC
Confidence 2 23458999999999999899999999999999999999999987653322211111110000 00012235
Q ss_pred HHHHHHHHHHHhccCCCCCCChHHHHHH-HHhhhc
Q 011519 282 GTELVRLASRCLQYEPRERPNPRSLVTA-LVTLQK 315 (484)
Q Consensus 282 ~~~l~~li~~cl~~dp~~Rps~~~il~~-l~~~~~ 315 (484)
+.++.+|+.+||+.||.+||+..+++.+ +.....
T Consensus 247 ~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~ 281 (311)
T 3ork_A 247 SADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN 281 (311)
T ss_dssp CHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhc
Confidence 6789999999999999999977776655 554433
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-46 Score=365.09 Aligned_cols=248 Identities=20% Similarity=0.214 Sum_probs=191.6
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCC
Q 011519 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~ 136 (484)
.|++.+.||+|+||+||+|.. .+++.||||+++... ..+.+.+|+.++.+++||||+++++++...+..++||||++
T Consensus 54 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 131 (349)
T 2w4o_A 54 FFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVT 131 (349)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred cEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCC
Confidence 477888899999999999995 468899999997643 34568899999999999999999999999999999999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecC---CCCceeeccCCccccCCC---C
Q 011519 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD---DVNPRLSCFGLMKNSRDG---R 210 (484)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~---~~~~kl~DfG~a~~~~~~---~ 210 (484)
+|+|.+++. ..+.+++..++.++.||+.||.|||+. ||+||||||+|||++. ++.+||+|||+++..... .
T Consensus 132 ~~~L~~~l~--~~~~~~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~ 208 (349)
T 2w4o_A 132 GGELFDRIV--EKGYYSERDAADAVKQILEAVAYLHEN-GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMK 208 (349)
T ss_dssp SCBHHHHHT--TCSSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEESSSSTTCCEEECCCC------------
T ss_pred CCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CeEecCCCcccEEEecCCCCCCEEEccCccccccCcccccc
Confidence 999999996 445699999999999999999999999 9999999999999975 889999999999875443 3
Q ss_pred cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHH
Q 011519 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (484)
Q Consensus 211 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (484)
...||+.|+|||++.+..++.++|||||||++|+|++|..||............+.... ...........+..+.+|+.
T Consensus 209 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~li~ 287 (349)
T 2w4o_A 209 TVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCE-YYFISPWWDEVSLNAKDLVR 287 (349)
T ss_dssp ----CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTC-CCCCTTTTTTSCHHHHHHHH
T ss_pred cccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCC-CccCCchhhhCCHHHHHHHH
Confidence 45789999999999988899999999999999999999998865432221111100000 00111223456788999999
Q ss_pred HHhccCCCCCCChHHHHHHHH
Q 011519 291 RCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~l~ 311 (484)
+||+.||++|||+.++++|-+
T Consensus 288 ~~L~~dP~~Rpt~~e~l~hp~ 308 (349)
T 2w4o_A 288 KLIVLDPKKRLTTFQALQHPW 308 (349)
T ss_dssp TTSCSSGGGSCCHHHHHHSTT
T ss_pred HHccCChhhCcCHHHHhcCcc
Confidence 999999999999999998743
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-46 Score=375.93 Aligned_cols=248 Identities=18% Similarity=0.247 Sum_probs=210.2
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCC---ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEE
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 131 (484)
...|.+.+.||+|+||+||+|+. .+|+.||||++..... .....+.+|+.+++.++||||+++++++...+..++|
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 35788889999999999999995 4799999999964321 2346789999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC--
Q 011519 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 209 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~-- 209 (484)
|||++||+|.+++. ..+.+++..++.++.||+.||.|||+. ||+||||||+|||++.++.+||+|||++......
T Consensus 95 ~E~~~gg~L~~~l~--~~~~l~~~~~~~i~~qi~~aL~~LH~~-givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~ 171 (476)
T 2y94_A 95 MEYVSGGELFDYIC--KNGRLDEKESRRLFQQILSGVDYCHRH-MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF 171 (476)
T ss_dssp EECCSSEEHHHHTT--SSSSCCHHHHHHHHHHHHHHHHHHHTT-TEECSCCSGGGEEECTTCCEEECCCSSCEECCTTCC
T ss_pred EeCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CCCcccccHHHEEEecCCCeEEEeccchhhcccccc
Confidence 99999999999996 456799999999999999999999999 9999999999999999999999999999876543
Q ss_pred -CcccCCCCCCCcccccCCCC-CCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHH
Q 011519 210 -RSYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287 (484)
Q Consensus 210 -~~~~~t~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (484)
....||+.|+|||++.+..+ +.++|||||||++|+|++|..||................ ...+...++.+.+
T Consensus 172 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~------~~~p~~~s~~~~~ 245 (476)
T 2y94_A 172 LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGI------FYTPQYLNPSVIS 245 (476)
T ss_dssp BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTC------CCCCTTCCHHHHH
T ss_pred ccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCC------cCCCccCCHHHHH
Confidence 35678999999999998765 679999999999999999999987653332222111111 1234455678999
Q ss_pred HHHHHhccCCCCCCChHHHHHHHHh
Q 011519 288 LASRCLQYEPRERPNPRSLVTALVT 312 (484)
Q Consensus 288 li~~cl~~dp~~Rps~~~il~~l~~ 312 (484)
|+.+||..||.+|||+.++++|-+-
T Consensus 246 Li~~~L~~dP~~Rpt~~eil~hp~~ 270 (476)
T 2y94_A 246 LLKHMLQVDPMKRATIKDIREHEWF 270 (476)
T ss_dssp HHHHHTCSSTTTSCCHHHHHTCHHH
T ss_pred HHHHHcCCCchhCcCHHHHHhCHHh
Confidence 9999999999999999999998553
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-45 Score=359.43 Aligned_cols=245 Identities=17% Similarity=0.239 Sum_probs=197.6
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCceeeeeeeeeeCC--------
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGD-------- 126 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~-------- 126 (484)
.+|++++.||+|+||+||+|+. .+++.||||+++..... ..+.+.+|+.+|++++||||+++++++.+..
T Consensus 6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 85 (332)
T 3qd2_B 6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEM 85 (332)
T ss_dssp HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHH
T ss_pred hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhh
Confidence 4678889999999999999995 47999999999754432 3567999999999999999999999986643
Q ss_pred -------------------------------------------------ceEEEEecCCCCCHHhhhccCCC-CCCCHHH
Q 011519 127 -------------------------------------------------ERLLVAEYMPNDTLAKHLFHWET-QPMKWAM 156 (484)
Q Consensus 127 -------------------------------------------------~~~lv~Ey~~~gsL~~~l~~~~~-~~l~~~~ 156 (484)
..++||||+++|+|.+++..... ...++..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~ 165 (332)
T 3qd2_B 86 DEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGV 165 (332)
T ss_dssp HC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHH
T ss_pred hhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHH
Confidence 27999999999999999974322 3456778
Q ss_pred HHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----------------CcccCCCCCCC
Q 011519 157 RLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----------------RSYSTNLAFTP 220 (484)
Q Consensus 157 ~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~----------------~~~~~t~~y~a 220 (484)
++.++.||+.||.|||+. ||+||||||+|||++.++.+||+|||+++..... ....||+.|+|
T Consensus 166 ~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a 244 (332)
T 3qd2_B 166 CLHIFIQIAEAVEFLHSK-GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMS 244 (332)
T ss_dssp HHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSC
T ss_pred HHHHHHHHHHHHHHHHhC-CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccC
Confidence 999999999999999999 9999999999999999999999999999876543 23468999999
Q ss_pred cccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHHhccCCCCC
Q 011519 221 PEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300 (484)
Q Consensus 221 PE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 300 (484)
||++.+..++.++|||||||++|+|++|..|+.... ..... .... .........++.+.+|+.+||+.||.+|
T Consensus 245 PE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~-~~~~~-~~~~-----~~~~~~~~~~~~~~~li~~~l~~~p~~R 317 (332)
T 3qd2_B 245 PEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERV-RIITD-VRNL-----KFPLLFTQKYPQEHMMVQDMLSPSPTER 317 (332)
T ss_dssp HHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHH-HHHHH-HHTT-----CCCHHHHHHCHHHHHHHHHHHCSSGGGS
T ss_pred hHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHH-HHHHH-hhcc-----CCCcccccCChhHHHHHHHHccCCCCcC
Confidence 999999899999999999999999999976532211 11100 0000 0001123445778999999999999999
Q ss_pred CChHHHHHH
Q 011519 301 PNPRSLVTA 309 (484)
Q Consensus 301 ps~~~il~~ 309 (484)
||+.+++++
T Consensus 318 ps~~~~l~~ 326 (332)
T 3qd2_B 318 PEATDIIEN 326 (332)
T ss_dssp CCHHHHHHS
T ss_pred CCHHHHhhc
Confidence 999999987
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-46 Score=380.01 Aligned_cols=247 Identities=19% Similarity=0.236 Sum_probs=201.8
Q ss_pred CCcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCC---CCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEE
Q 011519 56 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRS---AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 131 (484)
..+|++++.||+|+||.||+|. ..+++.||||+++.. .......+.+|+.+++.++||||+++++++...+..+||
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 4578899999999999999999 467899999999643 222345688999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhc-CCCcccccccccceeecCCCCceeeccCCccccCC--
Q 011519 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTS-KERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-- 208 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~-~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~-- 208 (484)
|||+++|+|.+++.. .+.+++..+..++.||+.||.|||+ . ||+||||||+|||++.++.+||+|||+++....
T Consensus 227 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~-giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 303 (446)
T 4ejn_A 227 MEYANGGELFFHLSR--ERVFSEDRARFYGAEIVSALDYLHSEK-NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG 303 (446)
T ss_dssp ECCCSSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHHT-CCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC--
T ss_pred EeeCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhhcC-CEEECCCCHHHEEECCCCCEEEccCCCceeccCCC
Confidence 999999999999963 4579999999999999999999998 7 999999999999999999999999999986432
Q ss_pred --CCcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHH
Q 011519 209 --GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 286 (484)
Q Consensus 209 --~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 286 (484)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||............... ...++...++++.
T Consensus 304 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~------~~~~p~~~~~~~~ 377 (446)
T 4ejn_A 304 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME------EIRFPRTLGPEAK 377 (446)
T ss_dssp ---CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHH
T ss_pred cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhC------CCCCCccCCHHHH
Confidence 24567899999999999999999999999999999999999998765433222221111 1124556678999
Q ss_pred HHHHHHhccCCCCCC-----ChHHHHHHHH
Q 011519 287 RLASRCLQYEPRERP-----NPRSLVTALV 311 (484)
Q Consensus 287 ~li~~cl~~dp~~Rp-----s~~~il~~l~ 311 (484)
+||.+||+.||.+|| |+.++++|-+
T Consensus 378 ~li~~~L~~dP~~R~~~~~~t~~ell~hp~ 407 (446)
T 4ejn_A 378 SLLSGLLKKDPKQRLGGGSEDAKEIMQHRF 407 (446)
T ss_dssp HHHHHHTCSSTTTSTTCSTTTHHHHHTSGG
T ss_pred HHHHHHcccCHHHhCCCCCCCHHHHHhCcc
Confidence 999999999999999 9999998843
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-45 Score=358.48 Aligned_cols=253 Identities=17% Similarity=0.232 Sum_probs=191.9
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCC-ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEec
Q 011519 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey 134 (484)
.+|++++.||+|+||+||+|. ..+++.||||+++.... ...+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 84 (317)
T 2pmi_A 5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEF 84 (317)
T ss_dssp --------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEEC
T ss_pred cceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEe
Confidence 467888999999999999999 45789999999975432 2356789999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccC----CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-
Q 011519 135 MPNDTLAKHLFHW----ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 209 (484)
Q Consensus 135 ~~~gsL~~~l~~~----~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~- 209 (484)
++ |+|.+++... ....+++..+..++.||+.||.|||+. ||+||||||+|||++.++.+||+|||+++.....
T Consensus 85 ~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~-~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 162 (317)
T 2pmi_A 85 MD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN-KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPV 162 (317)
T ss_dssp CC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCSSCEETTSCC
T ss_pred cC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCChHHeEEcCCCCEEECcCccceecCCCc
Confidence 97 5999988632 124589999999999999999999999 9999999999999999999999999999875432
Q ss_pred ---CcccCCCCCCCcccccCC-CCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcccc-------cccc--------
Q 011519 210 ---RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ-------TLTD-------- 270 (484)
Q Consensus 210 ---~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~-------~~~~-------- 270 (484)
....+|+.|+|||++.+. .++.++|||||||++|+|+||+.||.............. ....
T Consensus 163 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 242 (317)
T 2pmi_A 163 NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKY 242 (317)
T ss_dssp CCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTC
T ss_pred ccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhc
Confidence 345789999999999864 589999999999999999999998875432211110000 0000
Q ss_pred -cc------------ccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 271 -SC------------LEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 271 -~~------------~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
.. .....+...+.++.+|+.+||+.||++|||+.++++|-+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~ 296 (317)
T 2pmi_A 243 NPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPW 296 (317)
T ss_dssp CTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGG
T ss_pred ccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChh
Confidence 00 000111234678999999999999999999999998843
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-46 Score=371.91 Aligned_cols=251 Identities=16% Similarity=0.130 Sum_probs=195.8
Q ss_pred Cccccc-ccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCccHHHHHHHHHHHhc-CCCCceeeeeeeeee----CCceE
Q 011519 57 AMENIV-SEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQ-LRNRRLANLLGCCCE----GDERL 129 (484)
Q Consensus 57 ~~~~~~-~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~-l~hpniv~l~~~~~~----~~~~~ 129 (484)
..|.++ +.||+|+||+||+|.. .+++.||||+++. ...+.+|+.++.+ .+||||+++++++.. ...++
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~ 135 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 135 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEE
Confidence 456666 5789999999999994 5789999999963 2467789998755 589999999999875 56789
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecC---CCCceeeccCCcccc
Q 011519 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD---DVNPRLSCFGLMKNS 206 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~---~~~~kl~DfG~a~~~ 206 (484)
|||||++||+|.+++.......+++..+..|+.||+.||.|||+. ||+||||||+|||++. ++.+||+|||+++..
T Consensus 136 lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~ 214 (400)
T 1nxk_A 136 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI-NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET 214 (400)
T ss_dssp EEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred EEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCcCcceEEEecCCCCccEEEEeccccccc
Confidence 999999999999999765455799999999999999999999998 9999999999999997 789999999999875
Q ss_pred CCC---CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcccccccccc--ccCCCChHH
Q 011519 207 RDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSC--LEGQFSSDE 281 (484)
Q Consensus 207 ~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 281 (484)
... ....||+.|+|||++.+..++.++|||||||++|+|++|..||...............+.... ........+
T Consensus 215 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 294 (400)
T 1nxk_A 215 TSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEV 294 (400)
T ss_dssp C-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTTTTS
T ss_pred CCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCcccccC
Confidence 533 356789999999999988999999999999999999999998865321110000000000000 001112346
Q ss_pred HHHHHHHHHHHhccCCCCCCChHHHHHHHHhh
Q 011519 282 GTELVRLASRCLQYEPRERPNPRSLVTALVTL 313 (484)
Q Consensus 282 ~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~ 313 (484)
+.++.+||.+||..||.+|||+.++++|.+-.
T Consensus 295 s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~ 326 (400)
T 1nxk_A 295 SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM 326 (400)
T ss_dssp CHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHH
T ss_pred CHHHHHHHHHHCCCChhHCcCHHHHhcCcccc
Confidence 78899999999999999999999999997654
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-46 Score=361.35 Aligned_cols=257 Identities=19% Similarity=0.270 Sum_probs=196.7
Q ss_pred CcccccccCCCCCCceEEEEEeC-CCc---EEEEEEecCCC--CccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCce--
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLE-NQF---RIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER-- 128 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~---~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~-- 128 (484)
.+|.+++.||+|+||+||+|... ++. .||||+++... ....+.+.+|+.++++++||||+++++++......
T Consensus 23 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 102 (323)
T 3qup_A 23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGR 102 (323)
T ss_dssp --CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-----
T ss_pred hHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccC
Confidence 46788889999999999999954 332 79999997653 23467899999999999999999999999876654
Q ss_pred ----EEEEecCCCCCHHhhhccC----CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeecc
Q 011519 129 ----LLVAEYMPNDTLAKHLFHW----ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCF 200 (484)
Q Consensus 129 ----~lv~Ey~~~gsL~~~l~~~----~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Df 200 (484)
++||||+++|+|.+++... ....+++..++.++.||+.||.|||+. |++||||||+|||++.++.+||+||
T Consensus 103 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~-~ivH~Dikp~NIli~~~~~~kl~Df 181 (323)
T 3qup_A 103 LPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR-NFIHRDLAARNCMLAEDMTVCVADF 181 (323)
T ss_dssp --CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECTTSCEEECCC
T ss_pred CCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC-CcccCCCCcceEEEcCCCCEEEeec
Confidence 9999999999999999532 122589999999999999999999999 9999999999999999999999999
Q ss_pred CCccccCCC------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccc
Q 011519 201 GLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCL 273 (484)
Q Consensus 201 G~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 273 (484)
|+++..... ....+++.|+|||.+.+..++.++|||||||++|+|++ |..||.............. ..
T Consensus 182 g~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~-----~~ 256 (323)
T 3qup_A 182 GLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIG-----GN 256 (323)
T ss_dssp CC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHT-----TC
T ss_pred cccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhc-----CC
Confidence 999865432 23445778999999998889999999999999999999 7877764322221111111 11
Q ss_pred cCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhcCCCC
Q 011519 274 EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 319 (484)
Q Consensus 274 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~~ 319 (484)
....+...+..+.+|+.+||+.||.+|||+.++++.|+.+...+..
T Consensus 257 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~ 302 (323)
T 3qup_A 257 RLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSV 302 (323)
T ss_dssp CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC---
T ss_pred CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhh
Confidence 1223455678899999999999999999999999999998877644
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-46 Score=352.69 Aligned_cols=251 Identities=20% Similarity=0.267 Sum_probs=198.2
Q ss_pred CcccccccCCCCCCceEEEEEeCC----CcEEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLEN----QFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 131 (484)
.+|++.+.||+|+||+||+|.... +..||||++...... ..+.+.+|+.++++++||||+++++++. .+..++|
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~lv 93 (281)
T 1mp8_A 15 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWII 93 (281)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred HHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEEE
Confidence 578888999999999999998532 457999998764433 3567999999999999999999999984 5678999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC--
Q 011519 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 209 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~-- 209 (484)
|||+++|+|.+++.. ....+++..++.++.||+.||.|||+. |++||||||+|||++.++.+||+|||+++.....
T Consensus 94 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 171 (281)
T 1mp8_A 94 MELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 171 (281)
T ss_dssp EECCTTEEHHHHHHH-TTTTSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEEETTEEEECC------------
T ss_pred EecCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhC-CeecccccHHHEEECCCCCEEECccccccccCcccc
Confidence 999999999999964 344699999999999999999999999 9999999999999999999999999999875443
Q ss_pred ---CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHHH
Q 011519 210 ---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 285 (484)
Q Consensus 210 ---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 285 (484)
....+|+.|+|||++.+..++.++||||||+++|+|++ |..||............. .......+..+++.+
T Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~-----~~~~~~~~~~~~~~l 246 (281)
T 1mp8_A 172 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE-----NGERLPMPPNCPPTL 246 (281)
T ss_dssp -------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH-----TTCCCCCCTTCCHHH
T ss_pred cccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHH-----cCCCCCCCCCCCHHH
Confidence 23345678999999998889999999999999999997 887776432221111110 111122445667899
Q ss_pred HHHHHHHhccCCCCCCChHHHHHHHHhhhc
Q 011519 286 VRLASRCLQYEPRERPNPRSLVTALVTLQK 315 (484)
Q Consensus 286 ~~li~~cl~~dp~~Rps~~~il~~l~~~~~ 315 (484)
.+++.+||+.||.+|||+.+++++|+.+..
T Consensus 247 ~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 276 (281)
T 1mp8_A 247 YSLMTKCWAYDPSRRPRFTELKAQLSTILE 276 (281)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 999999999999999999999999988754
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-46 Score=352.62 Aligned_cols=250 Identities=20% Similarity=0.281 Sum_probs=208.1
Q ss_pred CCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCC---ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEE
Q 011519 55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (484)
Q Consensus 55 ~f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 130 (484)
.+.+|.+++.||+|+||+||+|.. .++..||||++..... .....+.+|+.+++.++||||+++++++.+.+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence 356788999999999999999994 5678999999854321 124568899999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-
Q 011519 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 209 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~- 209 (484)
||||+++|+|.+++.. ...+++..++.++.||+.||.|||+. |++||||||+|||++.++.+||+|||++......
T Consensus 87 v~e~~~~~~l~~~l~~--~~~~~~~~~~~~~~qi~~~l~~LH~~-~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~ 163 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQK--LSKFDEQRTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 163 (279)
T ss_dssp EECCCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTT-TCEECCCCGGGEEECTTSCEEECSCCEESCC----
T ss_pred EEecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CEecccCChHhEEEcCCCCEEEEeccccccCCccc
Confidence 9999999999999963 35699999999999999999999998 9999999999999999999999999998665433
Q ss_pred -CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHH
Q 011519 210 -RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288 (484)
Q Consensus 210 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 288 (484)
....||+.|+|||.+.+..++.++||||||+++|+|++|..||.............. ....++...+..+.+|
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~l 237 (279)
T 3fdn_A 164 RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR------VEFTFPDFVTEGARDL 237 (279)
T ss_dssp ----CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHH------TCCCCCTTSCHHHHHH
T ss_pred ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHh------CCCCCCCcCCHHHHHH
Confidence 456789999999999988899999999999999999999998875433322211111 1122445567889999
Q ss_pred HHHHhccCCCCCCChHHHHHHHHhh
Q 011519 289 ASRCLQYEPRERPNPRSLVTALVTL 313 (484)
Q Consensus 289 i~~cl~~dp~~Rps~~~il~~l~~~ 313 (484)
+.+||+.||.+|||+.++++|.+-.
T Consensus 238 i~~~l~~~p~~Rps~~e~l~h~~~~ 262 (279)
T 3fdn_A 238 ISRLLKHNPSQRPMLREVLEHPWIT 262 (279)
T ss_dssp HHHHCCSSGGGSCCHHHHHHCHHHH
T ss_pred HHHHhccChhhCCCHHHHhhCcccc
Confidence 9999999999999999999996543
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-46 Score=354.05 Aligned_cols=254 Identities=21% Similarity=0.340 Sum_probs=214.7
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEec
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey 134 (484)
..+|.+.+.||+|+||+||+|.. .++..||||++.... ...+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 12 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 90 (288)
T 3kfa_A 12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 90 (288)
T ss_dssp GGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred ccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEc
Confidence 35678889999999999999995 458899999997643 3467899999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCC----
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---- 210 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~---- 210 (484)
+++++|.+++.......+++..++.++.||+.||.|||+. |++||||||+||+++.++.+||+|||++.......
T Consensus 91 ~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~-~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 169 (288)
T 3kfa_A 91 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 169 (288)
T ss_dssp CTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHH-TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEE
T ss_pred CCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHC-CccCCCCCcceEEEcCCCCEEEccCccceeccCCccccc
Confidence 9999999999866667799999999999999999999999 99999999999999999999999999998765432
Q ss_pred -cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHH
Q 011519 211 -SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288 (484)
Q Consensus 211 -~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 288 (484)
...+|+.|+|||++.+..++.++||||||+++|+|++ |..||........... .........+..+++.+.+|
T Consensus 170 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~l 244 (288)
T 3kfa_A 170 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL-----LEKDYRMERPEGCPEKVYEL 244 (288)
T ss_dssp TTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHH-----HHTTCCCCCCTTCCHHHHHH
T ss_pred cCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-----HhccCCCCCCCCCCHHHHHH
Confidence 2345778999999998899999999999999999999 8877764332221111 11111223445567889999
Q ss_pred HHHHhccCCCCCCChHHHHHHHHhhhcC
Q 011519 289 ASRCLQYEPRERPNPRSLVTALVTLQKD 316 (484)
Q Consensus 289 i~~cl~~dp~~Rps~~~il~~l~~~~~~ 316 (484)
+..||..||.+|||+.++++.|+.+...
T Consensus 245 i~~~l~~dp~~Rps~~~~~~~l~~~~~~ 272 (288)
T 3kfa_A 245 MRACWQWNPSDRPSFAEIHQAFETMFQE 272 (288)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence 9999999999999999999999887654
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-46 Score=359.27 Aligned_cols=242 Identities=19% Similarity=0.204 Sum_probs=197.2
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCc--cHHHHHHHHHHHhcC-CCCceeeeeeeeeeCCceEEEEe
Q 011519 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAE 133 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~E 133 (484)
.|++++.||+|+||+||+|.. .+++.||||++...... ....+..|+..+.++ +||||+++++++.+.+..++|||
T Consensus 58 ~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e 137 (311)
T 3p1a_A 58 SFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTE 137 (311)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred heeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEe
Confidence 578888999999999999995 47999999998654332 234566677666665 89999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC---C
Q 011519 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---R 210 (484)
Q Consensus 134 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~---~ 210 (484)
|+ +++|.+++... +..+++..++.++.||+.||.|||+. +|+||||||+|||++.++.+||+|||++...... .
T Consensus 138 ~~-~~~L~~~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~~~ 214 (311)
T 3p1a_A 138 LC-GPSLQQHCEAW-GASLPEAQVWGYLRDTLLALAHLHSQ-GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGE 214 (311)
T ss_dssp CC-CCBHHHHHHHH-CSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECGGGCEEECCCTTCEECC------
T ss_pred cc-CCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC-CEecCCCCHHHEEECCCCCEEEccceeeeecccCCCCc
Confidence 99 67999998653 45699999999999999999999999 9999999999999999999999999998876443 3
Q ss_pred cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhh-HHhhhccccccccccccCCCChHHHHHHHHHH
Q 011519 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL-DLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289 (484)
Q Consensus 211 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 289 (484)
...||+.|+|||++.+ .++.++|||||||++|||++|..||..... ..+.... ....++...++.+.+|+
T Consensus 215 ~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~l~~li 285 (311)
T 3p1a_A 215 VQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGY--------LPPEFTAGLSSELRSVL 285 (311)
T ss_dssp CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHHHHTTTC--------CCHHHHTTSCHHHHHHH
T ss_pred ccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHhccC--------CCcccccCCCHHHHHHH
Confidence 4568999999999885 789999999999999999999876654321 1111111 11112234567899999
Q ss_pred HHHhccCCCCCCChHHHHHHHH
Q 011519 290 SRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 290 ~~cl~~dp~~Rps~~~il~~l~ 311 (484)
.+||+.||++|||+.+++++-+
T Consensus 286 ~~~L~~dP~~Rpt~~ell~hp~ 307 (311)
T 3p1a_A 286 VMMLEPDPKLRATAEALLALPV 307 (311)
T ss_dssp HHHSCSSTTTSCCHHHHHTSGG
T ss_pred HHHcCCChhhCcCHHHHHhCcc
Confidence 9999999999999999998743
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-45 Score=352.95 Aligned_cols=253 Identities=20% Similarity=0.313 Sum_probs=196.3
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCc--cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEec
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey 134 (484)
.+|.+.+.||+|+||+||+|.... .||||+++..... ..+.|.+|+.++++++||||+++++++ ..+..++||||
T Consensus 24 ~~y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~ 100 (289)
T 3og7_A 24 GQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQW 100 (289)
T ss_dssp TSCEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEEC
T ss_pred cceeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEEe
Confidence 467888999999999999998643 5999999765432 356799999999999999999999965 55678999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC------
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD------ 208 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~------ 208 (484)
+++++|.+++.. ....+++..++.++.||+.||.|||+. |++||||||+|||++.++.+||+|||++.....
T Consensus 101 ~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~lH~~-~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 178 (289)
T 3og7_A 101 CEGSSLYHHLHA-SETKFEMKKLIDIARQTARGMDYLHAK-SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQ 178 (289)
T ss_dssp CCEEEHHHHHTT-C---CCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEEETTTEEEECCCC-------------
T ss_pred cCCCcHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHhC-CcccccCccceEEECCCCCEEEccceecccccccccccc
Confidence 999999999964 345699999999999999999999999 999999999999999999999999999875432
Q ss_pred CCcccCCCCCCCccccc---CCCCCCCCceeehHHHHHHHhhCCCCCCchhhHH-hhhccccccccccccCCCChHHHHH
Q 011519 209 GRSYSTNLAFTPPEYLR---TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDL-IRDRNIQTLTDSCLEGQFSSDEGTE 284 (484)
Q Consensus 209 ~~~~~~t~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (484)
.....||+.|+|||++. +..++.++||||||+++|+|++|+.||....... ............ ........+++.
T Consensus 179 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 257 (289)
T 3og7_A 179 FEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSP-DLSKVRSNCPKR 257 (289)
T ss_dssp -----CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCC-CTTSSCTTSCHH
T ss_pred ccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCc-chhhccccCCHH
Confidence 12356899999999987 5568889999999999999999999886532111 111100000111 111233456788
Q ss_pred HHHHHHHHhccCCCCCCChHHHHHHHHhhhc
Q 011519 285 LVRLASRCLQYEPRERPNPRSLVTALVTLQK 315 (484)
Q Consensus 285 l~~li~~cl~~dp~~Rps~~~il~~l~~~~~ 315 (484)
+.+|+.+||+.||.+|||+.++++.|+.+.+
T Consensus 258 l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 258 MKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred HHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 9999999999999999999999999998754
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-45 Score=358.37 Aligned_cols=254 Identities=21% Similarity=0.288 Sum_probs=204.7
Q ss_pred CcccccccCCCCCCceEEEEEeC-C----CcEEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLE-N----QFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~-~----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 130 (484)
..|.+.+.||+|+||+||+|... + +..||||+++..... ....+.+|+.++++++||||+++++++...+..++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 123 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 123 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence 45677788999999999999843 2 245999999765432 24578999999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCC
Q 011519 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR 210 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 210 (484)
||||+++|+|.+++.. ....+++..++.++.||+.||.|||+. |++||||||+|||++.++.+||+|||+++......
T Consensus 124 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 201 (333)
T 1mqb_A 124 ITEYMENGALDKFLRE-KDGEFSVLQLVGMLRGIAAGMKYLANM-NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP 201 (333)
T ss_dssp EEECCTTEEHHHHHHH-TTTCSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTCCEEECCCCC--------
T ss_pred EEeCCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCChheEEECCCCcEEECCCCcchhhcccc
Confidence 9999999999999964 345799999999999999999999999 99999999999999999999999999998754321
Q ss_pred -------cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHH
Q 011519 211 -------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG 282 (484)
Q Consensus 211 -------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (484)
...+|+.|+|||++.+..++.++||||||+++|+|++ |..||.............. ......+..++
T Consensus 202 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~-----~~~~~~~~~~~ 276 (333)
T 1mqb_A 202 EATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAIND-----GFRLPTPMDCP 276 (333)
T ss_dssp ---------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHT-----TCCCCCCTTCB
T ss_pred ccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHC-----CCcCCCcccCC
Confidence 2334678999999998889999999999999999999 8888764432222111111 11112344567
Q ss_pred HHHHHHHHHHhccCCCCCCChHHHHHHHHhhhcCC
Q 011519 283 TELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (484)
Q Consensus 283 ~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 317 (484)
..+.+|+.+||+.||.+|||+.++++.|+.+....
T Consensus 277 ~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~ 311 (333)
T 1mqb_A 277 SAIYQLMMQCWQQERARRPKFADIVSILDKLIRAP 311 (333)
T ss_dssp HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 88999999999999999999999999999887654
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-46 Score=365.55 Aligned_cols=256 Identities=21% Similarity=0.272 Sum_probs=207.5
Q ss_pred CCcccccccCCCCCCceEEEEEe------CCCcEEEEEEecCCCC-ccHHHHHHHHHHHhcC-CCCceeeeeeeeeeCCc
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDE 127 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~ 127 (484)
...|.+++.||+|+||+||+|.. .++..||||++..... ...+.+.+|+.++.++ +||||+++++++...+.
T Consensus 44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~ 123 (344)
T 1rjb_A 44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGP 123 (344)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCc
Confidence 35778889999999999999995 2456899999975432 2356799999999999 89999999999999999
Q ss_pred eEEEEecCCCCCHHhhhccCCC---------------------CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccc
Q 011519 128 RLLVAEYMPNDTLAKHLFHWET---------------------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR 186 (484)
Q Consensus 128 ~~lv~Ey~~~gsL~~~l~~~~~---------------------~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~N 186 (484)
.++||||+++|+|.+++..... ..+++..++.++.||+.||.|||+. ||+||||||+|
T Consensus 124 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dikp~N 202 (344)
T 1rjb_A 124 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK-SCVHRDLAARN 202 (344)
T ss_dssp CEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT-TEEETTCSGGG
T ss_pred cEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCChhh
Confidence 9999999999999999975332 2489999999999999999999999 99999999999
Q ss_pred eeecCCCCceeeccCCccccCCCC------cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHH
Q 011519 187 IVFDDDVNPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDL 259 (484)
Q Consensus 187 ill~~~~~~kl~DfG~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~ 259 (484)
||++.++.+||+|||++....... ...+|+.|+|||++.+..++.++||||||+++|+|+| |..||.......
T Consensus 203 Ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~ 282 (344)
T 1rjb_A 203 VLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA 282 (344)
T ss_dssp EEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH
T ss_pred EEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHH
Confidence 999999999999999998654322 3345778999999998889999999999999999998 888876542211
Q ss_pred hhhccccccccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhcC
Q 011519 260 IRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316 (484)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 316 (484)
... ...........+...++.+.+|+.+||+.||.+|||+.+++++|+.+...
T Consensus 283 ~~~----~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 335 (344)
T 1rjb_A 283 NFY----KLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLAD 335 (344)
T ss_dssp HHH----HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred HHH----HHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 111 11111112233455678899999999999999999999999999987654
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-45 Score=371.84 Aligned_cols=254 Identities=17% Similarity=0.126 Sum_probs=207.3
Q ss_pred CCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCC---ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEE
Q 011519 55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (484)
Q Consensus 55 ~f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 130 (484)
...+|++++.||+|+||+||+|+. .+++.||||+++.... .....+.+|+.++..++||||+++++++.+.+..+|
T Consensus 72 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~l 151 (437)
T 4aw2_A 72 HREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYL 151 (437)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEE
T ss_pred ChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEE
Confidence 445778889999999999999995 4588999999964221 112348899999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-
Q 011519 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 209 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~- 209 (484)
||||++||+|.+++.. ..+.+++..+..++.||+.||.|||+. |||||||||+|||++.++.+||+|||+++.....
T Consensus 152 V~Ey~~gg~L~~~l~~-~~~~l~e~~~~~~~~qi~~aL~~LH~~-giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~ 229 (437)
T 4aw2_A 152 VMDYYVGGDLLTLLSK-FEDRLPEEMARFYLAEMVIAIDSVHQL-HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG 229 (437)
T ss_dssp EECCCTTCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS
T ss_pred EEecCCCCcHHHHHHH-ccCCCCHHHHHHHHHHHHHHHHHHHhC-CeEecccCHHHeeEcCCCCEEEcchhhhhhcccCC
Confidence 9999999999999964 245799999999999999999999999 9999999999999999999999999999765433
Q ss_pred ----CcccCCCCCCCccccc-----CCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChH
Q 011519 210 ----RSYSTNLAFTPPEYLR-----TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD 280 (484)
Q Consensus 210 ----~~~~~t~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (484)
....||+.|+|||++. +..++.++|||||||++|||+||+.||................... ........
T Consensus 230 ~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~-~~p~~~~~ 308 (437)
T 4aw2_A 230 TVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERF-QFPTQVTD 308 (437)
T ss_dssp CEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHC-CCCSSCCC
T ss_pred CcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccccc-cCCccccc
Confidence 2357999999999997 4568999999999999999999999987654332222211110000 01111234
Q ss_pred HHHHHHHHHHHHhccCCCC--CCChHHHHHHHH
Q 011519 281 EGTELVRLASRCLQYEPRE--RPNPRSLVTALV 311 (484)
Q Consensus 281 ~~~~l~~li~~cl~~dp~~--Rps~~~il~~l~ 311 (484)
+++++.+||.+||..+|++ ||++.++++|-+
T Consensus 309 ~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpf 341 (437)
T 4aw2_A 309 VSENAKDLIRRLICSREHRLGQNGIEDFKKHPF 341 (437)
T ss_dssp SCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGG
T ss_pred CCHHHHHHHHHHhcccccccCCCCHHHHhCCCc
Confidence 6788999999999988888 999999999844
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-46 Score=363.29 Aligned_cols=248 Identities=18% Similarity=0.231 Sum_probs=202.3
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCc--cHHHHHHHHHHHhcCCC--CceeeeeeeeeeCCceEEEE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRN--RRLANLLGCCCEGDERLLVA 132 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h--pniv~l~~~~~~~~~~~lv~ 132 (484)
..|++++.||+|+||+||++...+++.||||++...... ..+.+.+|+.+|..++| |||+++++++...+..+|||
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 88 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 88 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEE
Confidence 468899999999999999999888999999999755432 24678999999999976 99999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC---
Q 011519 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--- 209 (484)
Q Consensus 133 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~--- 209 (484)
|+ .+|+|.+++.. .+.+++.++..++.||+.||.|||+. ||+||||||+|||++ ++.+||+|||+++.....
T Consensus 89 e~-~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~al~~lH~~-~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~ 163 (343)
T 3dbq_A 89 EC-GNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS 163 (343)
T ss_dssp CC-CSEEHHHHHHH--SCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC------
T ss_pred eC-CCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCcceEEEE-CCcEEEeecccccccCccccc
Confidence 95 58899999974 45799999999999999999999999 999999999999997 678999999999875432
Q ss_pred ---CcccCCCCCCCcccccC-----------CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccC
Q 011519 210 ---RSYSTNLAFTPPEYLRT-----------GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEG 275 (484)
Q Consensus 210 ---~~~~~t~~y~aPE~~~~-----------~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 275 (484)
....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||........ ............
T Consensus 164 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~---~~~~~~~~~~~~ 240 (343)
T 3dbq_A 164 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS---KLHAIIDPNHEI 240 (343)
T ss_dssp ------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHH---HHHHHHCTTSCC
T ss_pred ccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHH---HHHHHhcCCccc
Confidence 24578999999999864 5688899999999999999999998864321111 111112222223
Q ss_pred CCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHh
Q 011519 276 QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVT 312 (484)
Q Consensus 276 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~ 312 (484)
.++...+..+.+|+.+||+.||.+|||+.++++|.+-
T Consensus 241 ~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~ 277 (343)
T 3dbq_A 241 EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV 277 (343)
T ss_dssp CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHH
T ss_pred CCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCccc
Confidence 3445556789999999999999999999999999664
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-46 Score=366.08 Aligned_cols=240 Identities=19% Similarity=0.214 Sum_probs=195.1
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCC---ccHHHHHHHHHH-HhcCCCCceeeeeeeeeeCCceEE
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARA-VGQLRNRRLANLLGCCCEGDERLL 130 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~-l~~l~hpniv~l~~~~~~~~~~~l 130 (484)
..+|++++.||+|+||+||+|+. .+++.||||+++.... .....+.+|..+ ++.++||||+++++++.+.+..|+
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 45788999999999999999995 5688999999975432 224456777776 567899999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC--
Q 011519 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-- 208 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~-- 208 (484)
||||++||+|.+++.. .+.+++..+..++.||+.||.|||+. ||+||||||+|||++.+|.+||+|||+++....
T Consensus 117 v~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~-givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~ 193 (373)
T 2r5t_A 117 VLDYINGGELFYHLQR--ERCFLEPRARFYAAEIASALGYLHSL-NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN 193 (373)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCC
T ss_pred EEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCHHHEEECCCCCEEEeeCccccccccCC
Confidence 9999999999999973 45689999999999999999999999 999999999999999999999999999986322
Q ss_pred --CCcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHH
Q 011519 209 --GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 286 (484)
Q Consensus 209 --~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 286 (484)
.....||+.|+|||++.+..++.++|||||||++|||++|..||............... ...++...+..+.
T Consensus 194 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~------~~~~~~~~~~~~~ 267 (373)
T 2r5t_A 194 STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK------PLQLKPNITNSAR 267 (373)
T ss_dssp CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHS------CCCCCSSSCHHHH
T ss_pred CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhc------ccCCCCCCCHHHH
Confidence 34567999999999999989999999999999999999999998765433322221111 1123455678899
Q ss_pred HHHHHHhccCCCCCCChH
Q 011519 287 RLASRCLQYEPRERPNPR 304 (484)
Q Consensus 287 ~li~~cl~~dp~~Rps~~ 304 (484)
+||.+||+.||.+||++.
T Consensus 268 ~li~~lL~~dp~~R~~~~ 285 (373)
T 2r5t_A 268 HLLEGLLQKDRTKRLGAK 285 (373)
T ss_dssp HHHHHHTCSSGGGSTTTT
T ss_pred HHHHHHcccCHHhCCCCC
Confidence 999999999999999975
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-46 Score=358.75 Aligned_cols=255 Identities=20% Similarity=0.305 Sum_probs=211.2
Q ss_pred CcccccccCCCCCCceEEEEEe------CCCcEEEEEEecCCCCc-cHHHHHHHHHHHhcC-CCCceeeeeeeeeeCCce
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQL-RNRRLANLLGCCCEGDER 128 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~ 128 (484)
.+|.+.+.||+|+||+||+|+. .+++.||||+++..... ..+.+.+|+.++.++ +||||+++++++...+..
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~ 102 (313)
T 1t46_A 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPT 102 (313)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCc
Confidence 4778889999999999999984 35688999999865432 356799999999999 899999999999999999
Q ss_pred EEEEecCCCCCHHhhhccCCC----------------CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCC
Q 011519 129 LLVAEYMPNDTLAKHLFHWET----------------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 192 (484)
Q Consensus 129 ~lv~Ey~~~gsL~~~l~~~~~----------------~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~ 192 (484)
++||||+++|+|.+++..... ..+++..++.++.||+.||.|||+. |++||||||+|||++.+
T Consensus 103 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~~ 181 (313)
T 1t46_A 103 LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK-NCIHRDLAARNILLTHG 181 (313)
T ss_dssp EEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEETT
T ss_pred EEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCccceEEEcCC
Confidence 999999999999999975432 2589999999999999999999999 99999999999999999
Q ss_pred CCceeeccCCccccCCCC------cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccc
Q 011519 193 VNPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNI 265 (484)
Q Consensus 193 ~~~kl~DfG~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~ 265 (484)
+.+||+|||++....... ...+|+.|+|||++.+..++.++||||||+++|+|+| |..||............
T Consensus 182 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~- 260 (313)
T 1t46_A 182 RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKM- 260 (313)
T ss_dssp TEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHH-
T ss_pred CCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHHH-
Confidence 999999999998765432 2345678999999998889999999999999999999 88777543221111111
Q ss_pred cccccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhcC
Q 011519 266 QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316 (484)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 316 (484)
.........+...+..+.+|+.+||+.||.+|||+.+++++|+.+...
T Consensus 261 ---~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 308 (313)
T 1t46_A 261 ---IKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 308 (313)
T ss_dssp ---HHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ---hccCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 111111223445678899999999999999999999999999987654
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-45 Score=355.19 Aligned_cols=253 Identities=15% Similarity=0.158 Sum_probs=202.1
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCC-----ccHHHHHHHHHHHhcCC---CCceeeeeeeeeeCC-
Q 011519 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW-----PDARQFLEEARAVGQLR---NRRLANLLGCCCEGD- 126 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~---hpniv~l~~~~~~~~- 126 (484)
.+|++++.||+|+||+||+|+ ..+++.||||++..... .....+.+|+.+++.++ ||||+++++++....
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~ 88 (308)
T 3g33_A 9 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRT 88 (308)
T ss_dssp -CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCS
T ss_pred cceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCC
Confidence 467888999999999999999 46789999999864321 12346778888877764 999999999998765
Q ss_pred ----ceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCC
Q 011519 127 ----ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGL 202 (484)
Q Consensus 127 ----~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~ 202 (484)
..++||||+. |+|.+++.......+++..++.++.||+.||.|||+. ||+||||||+|||++.++.+||+|||+
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 166 (308)
T 3g33_A 89 DREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN-CIVHRDLKPENILVTSGGTVKLADFGL 166 (308)
T ss_dssp SSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCTTTEEECTTSCEEECSCSC
T ss_pred CCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEEcCCCCEEEeeCcc
Confidence 4799999996 5999999865555699999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCC---CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcccccc-----------
Q 011519 203 MKNSRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL----------- 268 (484)
Q Consensus 203 a~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~----------- 268 (484)
++..... ....||+.|+|||++.+..++.++|||||||++|+|++|+.||................
T Consensus 167 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 246 (308)
T 3g33_A 167 ARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRD 246 (308)
T ss_dssp TTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSS
T ss_pred ccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccch
Confidence 9865543 34578999999999998899999999999999999999999886543222211110000
Q ss_pred ---ccccccC-------CCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 269 ---TDSCLEG-------QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 269 ---~~~~~~~-------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
....... ...+..++.+.+|+.+||+.||++|||+.++++|-+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~ 299 (308)
T 3g33_A 247 VSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSY 299 (308)
T ss_dssp CSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTT
T ss_pred hhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCcc
Confidence 0000000 011235678999999999999999999999998843
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-45 Score=350.89 Aligned_cols=252 Identities=23% Similarity=0.333 Sum_probs=210.6
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCC
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~ 136 (484)
..|++++.||+|+||+||+|...++..||||++.... ...+.+.+|+.+++.++||||+++++++. .+..++||||++
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~ 90 (279)
T 1qpc_A 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYME 90 (279)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCT
T ss_pred HhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecCC
Confidence 5788899999999999999998888899999997654 34578999999999999999999999986 456899999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-----Cc
Q 011519 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----RS 211 (484)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~-----~~ 211 (484)
+++|.+++.......+++..++.++.||+.||.|||+. |++||||||+|||++.++.+||+|||++...... ..
T Consensus 91 ~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 169 (279)
T 1qpc_A 91 NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER-NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREG 169 (279)
T ss_dssp TCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTT
T ss_pred CCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHhhEEEcCCCCEEECCCcccccccCcccccccC
Confidence 99999999643333699999999999999999999999 9999999999999999999999999999876543 23
Q ss_pred ccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHH
Q 011519 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (484)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (484)
..+++.|+|||++.+..++.++||||||+++|+|++ |..||.............. ......+...+..+.+|+.
T Consensus 170 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~li~ 244 (279)
T 1qpc_A 170 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER-----GYRMVRPDNCPEELYQLMR 244 (279)
T ss_dssp CCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT-----TCCCCCCTTCCHHHHHHHH
T ss_pred CCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhc-----ccCCCCcccccHHHHHHHH
Confidence 445778999999998889999999999999999999 8877765432222111111 1112234456788999999
Q ss_pred HHhccCCCCCCChHHHHHHHHhhhcC
Q 011519 291 RCLQYEPRERPNPRSLVTALVTLQKD 316 (484)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~l~~~~~~ 316 (484)
.||+.||++|||+.++++.|+.+...
T Consensus 245 ~~l~~~p~~Rps~~~l~~~l~~~~~~ 270 (279)
T 1qpc_A 245 LCWKERPEDRPTFDYLRSVLEDFFTA 270 (279)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHhccChhhCCCHHHHHHHHHHHHHh
Confidence 99999999999999999999987654
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-45 Score=356.19 Aligned_cols=248 Identities=18% Similarity=0.198 Sum_probs=206.8
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCc------cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEE
Q 011519 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP------DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 130 (484)
.|++++.||+|+||.||+|.. .+|+.||||++...... ..+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus 13 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 92 (321)
T 2a2a_A 13 FYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVL 92 (321)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 578889999999999999995 56899999999754322 25679999999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCC----CceeeccCCcccc
Q 011519 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV----NPRLSCFGLMKNS 206 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~----~~kl~DfG~a~~~ 206 (484)
||||+++++|.+++. ....+++..++.++.||+.||.|||+. |++||||||+|||++.++ .+||+|||++...
T Consensus 93 v~e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~lH~~-~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~ 169 (321)
T 2a2a_A 93 ILELVSGGELFDFLA--QKESLSEEEATSFIKQILDGVNYLHTK-KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169 (321)
T ss_dssp EECCCCSCBHHHHHH--TCSCEEHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEESCTTSSSCCEEECCCTTCEEC
T ss_pred EEEcCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCChHHEEEecCCCCcCCEEEccCccceec
Confidence 999999999999997 455789999999999999999999999 999999999999999887 7999999999876
Q ss_pred CCC---CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHH
Q 011519 207 RDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283 (484)
Q Consensus 207 ~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (484)
... ....||+.|+|||++.+..++.++||||||+++|+|++|..||.................. .........+.
T Consensus 170 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~ 247 (321)
T 2a2a_A 170 EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYD--FDEEFFSHTSE 247 (321)
T ss_dssp CTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCC--CCHHHHTTCCH
T ss_pred CccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccc--cChhhhcccCH
Confidence 543 3456899999999999889999999999999999999999998754332222111110000 00001123457
Q ss_pred HHHHHHHHHhccCCCCCCChHHHHHHH
Q 011519 284 ELVRLASRCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 284 ~l~~li~~cl~~dp~~Rps~~~il~~l 310 (484)
.+.+|+.+||..||.+|||+.++++|-
T Consensus 248 ~~~~li~~~l~~dp~~Rps~~e~l~hp 274 (321)
T 2a2a_A 248 LAKDFIRKLLVKETRKRLTIQEALRHP 274 (321)
T ss_dssp HHHHHHHTTSCSSTTTSCCHHHHHHST
T ss_pred HHHHHHHHHcCCChhhCcCHHHHhcCc
Confidence 899999999999999999999999873
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-45 Score=353.69 Aligned_cols=258 Identities=16% Similarity=0.186 Sum_probs=204.4
Q ss_pred hcCCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCcc---HHHHHHHHHHHhcCCCCceeeeeeeeeeCCce
Q 011519 53 TSGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPD---ARQFLEEARAVGQLRNRRLANLLGCCCEGDER 128 (484)
Q Consensus 53 ~~~f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 128 (484)
...+..|++++.||+|+||.||+|.. .+++.||||++....... .+.+.+|+.++.+++||||+++++++...+..
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~ 109 (309)
T 2h34_A 30 GTQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQL 109 (309)
T ss_dssp ----CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEE
T ss_pred CcEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeE
Confidence 34578899999999999999999995 578899999997543222 46789999999999999999999999999999
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC
Q 011519 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 208 (484)
Q Consensus 129 ~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~ 208 (484)
++||||+++++|.+++.. .+.+++..++.++.||+.||.|||+. |++||||||+|||++.++.+||+|||++.....
T Consensus 110 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 186 (309)
T 2h34_A 110 YVDMRLINGVDLAAMLRR--QGPLAPPRAVAIVRQIGSALDAAHAA-GATHRDVKPENILVSADDFAYLVDFGIASATTD 186 (309)
T ss_dssp EEEEECCCCEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTSCEEECSCCC------
T ss_pred EEEEEecCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-cCCcCCCChHHEEEcCCCCEEEecCccCccccc
Confidence 999999999999999973 35699999999999999999999999 999999999999999999999999999876543
Q ss_pred C-----CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHH
Q 011519 209 G-----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283 (484)
Q Consensus 209 ~-----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (484)
. ....+|+.|+|||++.+..++.++||||||+++|+|+||+.||.................. ....+..++.
T Consensus 187 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 263 (309)
T 2h34_A 187 EKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQAIPR---PSTVRPGIPV 263 (309)
T ss_dssp ----------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHSCCCC---GGGTSTTCCT
T ss_pred cccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhccCCCC---ccccCCCCCH
Confidence 2 2456889999999999888999999999999999999999998765443222111111111 1123345567
Q ss_pred HHHHHHHHHhccCCCCCC-ChHHHHHHHHhhhcC
Q 011519 284 ELVRLASRCLQYEPRERP-NPRSLVTALVTLQKD 316 (484)
Q Consensus 284 ~l~~li~~cl~~dp~~Rp-s~~~il~~l~~~~~~ 316 (484)
.+.+|+.+||+.||++|| |++++++.|+.....
T Consensus 264 ~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~ 297 (309)
T 2h34_A 264 AFDAVIARGMAKNPEDRYVTCGDLSAAAHAALAT 297 (309)
T ss_dssp HHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC-
T ss_pred HHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHh
Confidence 899999999999999999 999999999876554
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-46 Score=352.91 Aligned_cols=247 Identities=19% Similarity=0.295 Sum_probs=206.6
Q ss_pred cccccccCCCCCCceEEEEEeC-CCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeee------------
Q 011519 58 MENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE------------ 124 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~------------ 124 (484)
+|++++.||+|+||.||+|... +++.||||++.... +.+.+|+.++++++||||+++++++..
T Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~ 87 (284)
T 2a19_B 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNS 87 (284)
T ss_dssp HEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC--------
T ss_pred ccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccc
Confidence 5778888999999999999964 78999999997543 357799999999999999999998854
Q ss_pred ----CCceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeecc
Q 011519 125 ----GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCF 200 (484)
Q Consensus 125 ----~~~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~Df 200 (484)
....++||||+++|+|.+++.......+++..++.++.||+.||.|||+. |++|+||||+|||++.++.+||+||
T Consensus 88 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~kl~Df 166 (284)
T 2a19_B 88 SRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK-KLINRDLKPSNIFLVDTKQVKIGDF 166 (284)
T ss_dssp -CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEEETTEEEECCC
T ss_pred cccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeccCCHHHEEEcCCCCEEECcc
Confidence 34589999999999999999755556799999999999999999999999 9999999999999999999999999
Q ss_pred CCccccCCC---CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCC
Q 011519 201 GLMKNSRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQF 277 (484)
Q Consensus 201 G~a~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (484)
|++...... ....+|+.|+|||++.+..++.++||||||+++|+|++|..|+.... .... .+. ....
T Consensus 167 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~-~~~~-----~~~----~~~~ 236 (284)
T 2a19_B 167 GLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS-KFFT-----DLR----DGII 236 (284)
T ss_dssp TTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH-HHHH-----HHH----TTCC
T ss_pred hhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH-HHHH-----Hhh----cccc
Confidence 998876543 34568999999999998889999999999999999999997654321 1111 111 1123
Q ss_pred ChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhcCCCC
Q 011519 278 SSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 319 (484)
Q Consensus 278 ~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~~ 319 (484)
+...+..+.+|+.+||+.||.+|||+.+++++|+.+......
T Consensus 237 ~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~~ 278 (284)
T 2a19_B 237 SDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEK 278 (284)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC----
T ss_pred cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCCc
Confidence 344567899999999999999999999999999998876543
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-45 Score=353.81 Aligned_cols=255 Identities=15% Similarity=0.139 Sum_probs=208.1
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCccHHHHHHHHHHHhcC-CCCceeeeeeeeeeCCceEEEEec
Q 011519 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEY 134 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~Ey 134 (484)
.+|.+++.||+|+||+||+|. ..+++.||||++.... ..+.+.+|+.++..+ +|+||+++++++......++||||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 87 (298)
T 1csn_A 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDL 87 (298)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEEC
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEe
Confidence 468888999999999999999 4679999999986543 234578999999999 799999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCC-----ceeeccCCccccCCC
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN-----PRLSCFGLMKNSRDG 209 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~-----~kl~DfG~a~~~~~~ 209 (484)
+ +++|.+++.. .+..+++..++.++.||+.||.|||+. ||+||||||+|||++.++. +||+|||+++.....
T Consensus 88 ~-~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~ 164 (298)
T 1csn_A 88 L-GPSLEDLLDL-CGRKFSVKTVAMAAKQMLARVQSIHEK-SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDP 164 (298)
T ss_dssp C-CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCT
T ss_pred c-CCCHHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccc
Confidence 9 9999999975 345699999999999999999999998 9999999999999987766 999999999865432
Q ss_pred -----------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhh---HHhhhccccccccccccC
Q 011519 210 -----------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL---DLIRDRNIQTLTDSCLEG 275 (484)
Q Consensus 210 -----------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~---~~~~~~~~~~~~~~~~~~ 275 (484)
....||+.|+|||++.+..++.++||||||+++|+|++|+.||..... .............. ...
T Consensus 165 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~ 243 (298)
T 1csn_A 165 VTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQST-PLR 243 (298)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHS-CHH
T ss_pred cccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCc-cHH
Confidence 345689999999999988899999999999999999999998865211 00000000000000 000
Q ss_pred CCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhcCC
Q 011519 276 QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (484)
Q Consensus 276 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 317 (484)
.....+++.+.+|+.+||+.||++|||+.+|++.|+.+....
T Consensus 244 ~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~ 285 (298)
T 1csn_A 244 ELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERL 285 (298)
T ss_dssp HHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred HHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhc
Confidence 112244678999999999999999999999999999887654
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-45 Score=356.51 Aligned_cols=262 Identities=16% Similarity=0.202 Sum_probs=204.1
Q ss_pred cCCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCc---cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceE
Q 011519 54 SGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129 (484)
Q Consensus 54 ~~f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 129 (484)
..+.+|++++.||+|+||.||+|.. .+++.||||++...... ....+.+|+.++++++||||+++++++...+..+
T Consensus 29 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 108 (310)
T 2wqm_A 29 NTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELN 108 (310)
T ss_dssp SSGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred ccccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEE
Confidence 3456789999999999999999994 67899999999754322 3557899999999999999999999999999999
Q ss_pred EEEecCCCCCHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccC
Q 011519 130 LVAEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 207 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~ 207 (484)
+||||+++|+|.+++... ....+++..++.++.||+.||.|||+. |++|+||||+||+++.++.+||+|||++....
T Consensus 109 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~-~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 109 IVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR-RVMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp EEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred EEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC-CeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 999999999999998631 345689999999999999999999999 99999999999999999999999999987654
Q ss_pred CC----CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHH
Q 011519 208 DG----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283 (484)
Q Consensus 208 ~~----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (484)
.. ....+|+.|+|||++.+..++.++||||||+++|+|++|..||.......... ...+.........+...+.
T Consensus 188 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 265 (310)
T 2wqm_A 188 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSL--CKKIEQCDYPPLPSDHYSE 265 (310)
T ss_dssp -----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHH--HHHHHTTCSCCCCTTTSCH
T ss_pred CCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHH--HHHhhcccCCCCcccccCH
Confidence 32 24568899999999998889999999999999999999999886542211100 0000000011111244567
Q ss_pred HHHHHHHHHhccCCCCCCChHHHHHHHHhhhcCCC
Q 011519 284 ELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 318 (484)
Q Consensus 284 ~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~ 318 (484)
++.+|+.+||+.||.+|||+.++++.|+.+.....
T Consensus 266 ~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~ 300 (310)
T 2wqm_A 266 ELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTA 300 (310)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhh
Confidence 89999999999999999999999999999876543
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-45 Score=350.41 Aligned_cols=250 Identities=18% Similarity=0.243 Sum_probs=210.7
Q ss_pred cCCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCC---CccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceE
Q 011519 54 SGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129 (484)
Q Consensus 54 ~~f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 129 (484)
-...+|++++.||+|+||.||+|.. .+++.||||++.... ....+.+.+|+.+++.++||||+++++++.+.+..+
T Consensus 11 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 90 (284)
T 2vgo_A 11 FTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIY 90 (284)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEE
Confidence 3456889999999999999999995 468899999986432 122467899999999999999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC
Q 011519 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 209 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 209 (484)
+||||+++|+|.+++.. .+.+++..++.++.||+.||.|||+. |++||||||+||+++.++.+||+|||++......
T Consensus 91 lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~ 167 (284)
T 2vgo_A 91 LMLEFAPRGELYKELQK--HGRFDEQRSATFMEELADALHYCHER-KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL 167 (284)
T ss_dssp EEECCCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCSGGGEEECTTCCEEECCCTTCEECSSS
T ss_pred EEEEeCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCHHHEEEcCCCCEEEecccccccCccc
Confidence 99999999999999973 34699999999999999999999999 9999999999999999999999999998765432
Q ss_pred --CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHH
Q 011519 210 --RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287 (484)
Q Consensus 210 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (484)
....||+.|+|||++.+..++.++||||||+++|+|++|..||.............. ....++...+..+.+
T Consensus 168 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 241 (284)
T 2vgo_A 168 RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVN------VDLKFPPFLSDGSKD 241 (284)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHT------TCCCCCTTSCHHHHH
T ss_pred ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhc------cccCCCCcCCHHHHH
Confidence 356789999999999988899999999999999999999998865432222111111 011244556788999
Q ss_pred HHHHHhccCCCCCCChHHHHHHHHh
Q 011519 288 LASRCLQYEPRERPNPRSLVTALVT 312 (484)
Q Consensus 288 li~~cl~~dp~~Rps~~~il~~l~~ 312 (484)
|+.+||+.||.+|||+.++++|-+-
T Consensus 242 li~~~l~~~p~~Rps~~~ll~h~~~ 266 (284)
T 2vgo_A 242 LISKLLRYHPPQRLPLKGVMEHPWV 266 (284)
T ss_dssp HHHHHSCSSGGGSCCHHHHHTCHHH
T ss_pred HHHHHhhcCHhhCCCHHHHhhCHHH
Confidence 9999999999999999999998543
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-45 Score=358.54 Aligned_cols=255 Identities=22% Similarity=0.298 Sum_probs=209.5
Q ss_pred ccccccCCCCCCceEEEEEe-----CCCcEEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCceeeeeeeeeeC--CceEE
Q 011519 59 ENIVSEHGEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEG--DERLL 130 (484)
Q Consensus 59 ~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~--~~~~l 130 (484)
+++++.||+|+||+||++.. .+++.||||+++..... ..+.+.+|+.++++++||||+++++++.+. ...++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 48889999999999998863 36889999999865432 356799999999999999999999999874 56899
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-
Q 011519 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 209 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~- 209 (484)
||||+++|+|.+++.. ..+++..++.++.||+.||.|||+. |++||||||+|||++.++.+||+|||++......
T Consensus 113 v~e~~~~~~L~~~l~~---~~~~~~~~~~i~~~l~~~l~~LH~~-~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 188 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPR---HSIGLAQLLLFAQQICEGMAYLHAQ-HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGH 188 (318)
T ss_dssp EECCCTTCBHHHHGGG---SCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCGGGCEECCTTC
T ss_pred EEecccCCcHHHHHhh---CCCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCchheEEEcCCCCEEECCccccccccccc
Confidence 9999999999999953 3599999999999999999999999 9999999999999999999999999999876543
Q ss_pred ------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhh----------hccccccccccc
Q 011519 210 ------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIR----------DRNIQTLTDSCL 273 (484)
Q Consensus 210 ------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~----------~~~~~~~~~~~~ 273 (484)
....+|+.|+|||++.+..++.++||||||+++|+|+||..|+......... ............
T Consensus 189 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (318)
T 3lxp_A 189 EYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGE 268 (318)
T ss_dssp SEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTC
T ss_pred cccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhccc
Confidence 2345678899999999888999999999999999999999887643222111 011111122222
Q ss_pred cCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhcCC
Q 011519 274 EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (484)
Q Consensus 274 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 317 (484)
....+..++..+.+|+.+||+.||.+|||+.++++.|+.+....
T Consensus 269 ~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 312 (318)
T 3lxp_A 269 RLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKY 312 (318)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhh
Confidence 23345667789999999999999999999999999999886543
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-45 Score=349.93 Aligned_cols=253 Identities=21% Similarity=0.290 Sum_probs=205.3
Q ss_pred ccccccCCCCCCceEEEEEe-CCC---cEEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCce-EEEE
Q 011519 59 ENIVSEHGEKAPNVVYKGKL-ENQ---FRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDER-LLVA 132 (484)
Q Consensus 59 ~~~~~~lG~G~~g~Vy~~~~-~~~---~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~-~lv~ 132 (484)
+++.+.||+|+||+||+|.. .++ ..||||++...... ..+.+.+|+.+++.++||||+++++++.+.+.. ++||
T Consensus 23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~ 102 (298)
T 3pls_A 23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL 102 (298)
T ss_dssp EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEE
Confidence 44457889999999999984 333 37999999764432 356799999999999999999999999876655 9999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC----
Q 011519 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD---- 208 (484)
Q Consensus 133 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~---- 208 (484)
||+.+|+|.+++.. ....+++..++.++.||+.||.|||+. |++||||||+|||++.++.+||+|||+++....
T Consensus 103 e~~~~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~-~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~ 180 (298)
T 3pls_A 103 PYMCHGDLLQFIRS-PQRNPTVKDLISFGLQVARGMEYLAEQ-KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYY 180 (298)
T ss_dssp CCCTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGG
T ss_pred ecccCCCHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCcceEEEcCCCcEEeCcCCCcccccCCccc
Confidence 99999999999964 356789999999999999999999999 999999999999999999999999999975432
Q ss_pred ----CCcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHH
Q 011519 209 ----GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTE 284 (484)
Q Consensus 209 ----~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (484)
.....+|+.|+|||.+.+..++.++||||||+++|+|+||..||........ .............+...+..
T Consensus 181 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 256 (298)
T 3pls_A 181 SVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFD----LTHFLAQGRRLPQPEYCPDS 256 (298)
T ss_dssp CSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGG----HHHHHHTTCCCCCCTTCCHH
T ss_pred ccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHH----HHHHhhcCCCCCCCccchHH
Confidence 2344567899999999988999999999999999999997766543321111 01111111112234456688
Q ss_pred HHHHHHHHhccCCCCCCChHHHHHHHHhhhcCC
Q 011519 285 LVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (484)
Q Consensus 285 l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 317 (484)
+.+|+.+||+.||.+|||+.++++.|+.+....
T Consensus 257 l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l 289 (298)
T 3pls_A 257 LYQVMQQCWEADPAVRPTFRVLVGEVEQIVSAL 289 (298)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999987654
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-45 Score=355.88 Aligned_cols=257 Identities=22% Similarity=0.311 Sum_probs=209.5
Q ss_pred CCCcccccccCCCCCCceEEEEEe-CCCcE--EEEEEecCCCC-ccHHHHHHHHHHHhcC-CCCceeeeeeeeeeCCceE
Q 011519 55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFR--IAVKRFNRSAW-PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL 129 (484)
Q Consensus 55 ~f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~-~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~ 129 (484)
++.+|++++.||+|+||.||+|.. .++.. ||||.++.... ...+.+.+|+.+++++ +||||+++++++.+.+..+
T Consensus 23 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 102 (327)
T 1fvr_A 23 DWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 102 (327)
T ss_dssp CGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEE
T ss_pred cHHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceE
Confidence 356788889999999999999994 56664 49999875332 2355789999999999 8999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCc
Q 011519 130 LVAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNP 195 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~ 195 (484)
+||||+++|+|.+++.... ...+++..++.++.||+.||.|||+. |++||||||+|||++.++.+
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~dlkp~NIl~~~~~~~ 181 (327)
T 1fvr_A 103 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK-QFIHRDLAARNILVGENYVA 181 (327)
T ss_dssp EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECGGGCE
T ss_pred EEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCccceEEEcCCCeE
Confidence 9999999999999997432 24699999999999999999999999 99999999999999999999
Q ss_pred eeeccCCccccCC---CCcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccc
Q 011519 196 RLSCFGLMKNSRD---GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDS 271 (484)
Q Consensus 196 kl~DfG~a~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~ 271 (484)
||+|||+++.... .....+++.|+|||++.+..++.++||||||+++|+|+| |..||...............
T Consensus 182 kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~---- 257 (327)
T 1fvr_A 182 KIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG---- 257 (327)
T ss_dssp EECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGT----
T ss_pred EEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhcC----
Confidence 9999999875332 233456789999999988889999999999999999998 99887654333222211111
Q ss_pred cccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhcCC
Q 011519 272 CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (484)
Q Consensus 272 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 317 (484)
.....+..+++.+.+|+.+||..||.+|||+.+++++|..+....
T Consensus 258 -~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 302 (327)
T 1fvr_A 258 -YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER 302 (327)
T ss_dssp -CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred -CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhh
Confidence 112334556788999999999999999999999999999887654
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-45 Score=349.81 Aligned_cols=252 Identities=17% Similarity=0.195 Sum_probs=209.0
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCc--cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEE
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 132 (484)
..+|++++.||+|+||+||+|.. .+++.||||++...... ..+.+.+|+.++++++||||+++++++...+..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 35788999999999999999994 56899999999654322 3567889999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCC---ceeeccCCccccCCC
Q 011519 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN---PRLSCFGLMKNSRDG 209 (484)
Q Consensus 133 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~---~kl~DfG~a~~~~~~ 209 (484)
||+++++|.+++.. ...+++..+..++.||+.||.|||+. |++||||||+||+++.++. +||+|||++......
T Consensus 85 e~~~~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (284)
T 3kk8_A 85 DLVTGGELFEDIVA--REFYSEADASHCIQQILESIAYCHSN-GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 161 (284)
T ss_dssp CCCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSS
T ss_pred ecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccC
Confidence 99999999998863 45699999999999999999999999 9999999999999986655 999999999776544
Q ss_pred C---cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHH
Q 011519 210 R---SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 286 (484)
Q Consensus 210 ~---~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 286 (484)
. ...||+.|+|||++.+..++.++||||||+++|+|++|..||................... ........++.+.
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 239 (284)
T 3kk8_A 162 EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY--PSPEWDTVTPEAK 239 (284)
T ss_dssp CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCC--CTTTTTTSCHHHH
T ss_pred ccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccC--CchhhcccCHHHH
Confidence 3 4578999999999999889999999999999999999999987654332222111111110 1111234567899
Q ss_pred HHHHHHhccCCCCCCChHHHHHHHHh
Q 011519 287 RLASRCLQYEPRERPNPRSLVTALVT 312 (484)
Q Consensus 287 ~li~~cl~~dp~~Rps~~~il~~l~~ 312 (484)
+|+.+||+.||++|||+.++++|-+-
T Consensus 240 ~li~~~l~~dp~~Rps~~~~l~h~~~ 265 (284)
T 3kk8_A 240 SLIDSMLTVNPKKRITADQALKVPWI 265 (284)
T ss_dssp HHHHHHSCSSTTTSCCHHHHTTSHHH
T ss_pred HHHHHHcccChhhCCCHHHHhcCccc
Confidence 99999999999999999999998543
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-45 Score=358.18 Aligned_cols=254 Identities=20% Similarity=0.303 Sum_probs=210.4
Q ss_pred CcccccccCCCCCCceEEEEEe--------CCCcEEEEEEecCCCCc-cHHHHHHHHHHHhcC-CCCceeeeeeeeeeCC
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL--------ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQL-RNRRLANLLGCCCEGD 126 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~ 126 (484)
.+|.+++.||+|+||+||+|.. .++..||||+++..... ..+.+.+|+.+++++ +||||+++++++...+
T Consensus 35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 114 (334)
T 2pvf_A 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 114 (334)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCC
Confidence 5788889999999999999985 34678999999765432 356789999999999 8999999999999999
Q ss_pred ceEEEEecCCCCCHHhhhccCCC--------------CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCC
Q 011519 127 ERLLVAEYMPNDTLAKHLFHWET--------------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 192 (484)
Q Consensus 127 ~~~lv~Ey~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~ 192 (484)
..++||||+++|+|.+++..... ..+++..++.++.||+.||.|||+. |++||||||+|||++.+
T Consensus 115 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~ 193 (334)
T 2pvf_A 115 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ-KCIHRDLAARNVLVTEN 193 (334)
T ss_dssp CCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTT
T ss_pred ceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCccceEEEcCC
Confidence 99999999999999999975321 2489999999999999999999999 99999999999999999
Q ss_pred CCceeeccCCccccCCC------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccc
Q 011519 193 VNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNI 265 (484)
Q Consensus 193 ~~~kl~DfG~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~ 265 (484)
+.+||+|||++...... ....+|+.|+|||++.+..++.++||||||+++|+|+| |..||.............
T Consensus 194 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~ 273 (334)
T 2pvf_A 194 NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 273 (334)
T ss_dssp CCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHH
T ss_pred CCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHHHHh
Confidence 99999999999865542 23456788999999988889999999999999999999 888876543332221111
Q ss_pred cccccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhcC
Q 011519 266 QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316 (484)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 316 (484)
. ......+..++..+.+++.+||+.||.+|||+.+++++|+.+...
T Consensus 274 ~-----~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~ 319 (334)
T 2pvf_A 274 E-----GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL 319 (334)
T ss_dssp H-----TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred c-----CCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 1 111223455678899999999999999999999999999988654
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-45 Score=346.73 Aligned_cols=245 Identities=18% Similarity=0.211 Sum_probs=206.6
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecC
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~ 135 (484)
..|.+.+.||+|+||+||+|.. .++..||+|++........+.+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 88 (277)
T 3f3z_A 9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELC 88 (277)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred hhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEecc
Confidence 3678888999999999999995 457899999997765556788999999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceee---cCCCCceeeccCCccccCCC---
Q 011519 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF---DDDVNPRLSCFGLMKNSRDG--- 209 (484)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill---~~~~~~kl~DfG~a~~~~~~--- 209 (484)
++++|.+++.. .+.+++..++.++.|++.||.|||+. |++||||||+|||+ +.++.+||+|||++......
T Consensus 89 ~~~~L~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~~ 165 (277)
T 3f3z_A 89 TGGELFERVVH--KRVFRESDAARIMKDVLSAVAYCHKL-NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMM 165 (277)
T ss_dssp CSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSCB
T ss_pred CCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccch
Confidence 99999999863 45699999999999999999999999 99999999999999 78899999999999875543
Q ss_pred CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCCh----HHHHHH
Q 011519 210 RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSS----DEGTEL 285 (484)
Q Consensus 210 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l 285 (484)
....+|+.|+|||++.+ .++.++||||||+++|+|++|..||................ ..++. ..++.+
T Consensus 166 ~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 238 (277)
T 3f3z_A 166 RTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGT------FTFPEKDWLNVSPQA 238 (277)
T ss_dssp CCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC------CCCCHHHHTTSCHHH
T ss_pred hccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCC------CCCCchhhhcCCHHH
Confidence 34578999999999875 48999999999999999999999887543322211111110 01121 346789
Q ss_pred HHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 286 VRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 286 ~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
.+|+.+||+.||.+|||+.++++|-+
T Consensus 239 ~~li~~~l~~dp~~R~s~~~~l~h~~ 264 (277)
T 3f3z_A 239 ESLIRRLLTKSPKQRITSLQALEHEW 264 (277)
T ss_dssp HHHHHHHTCSSTTTSCCHHHHTTSHH
T ss_pred HHHHHHHccCChhhCcCHHHHhcCHH
Confidence 99999999999999999999998744
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-45 Score=351.25 Aligned_cols=253 Identities=25% Similarity=0.343 Sum_probs=203.7
Q ss_pred CCCcccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeC-CceEEEEe
Q 011519 55 GFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEG-DERLLVAE 133 (484)
Q Consensus 55 ~f~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-~~~~lv~E 133 (484)
++.+|++++.||+|+||+||++.. +++.||||+++... ..+.+.+|+.++++++||||+++++++... +..++|||
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e 95 (278)
T 1byg_A 19 NMKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 95 (278)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEEC
T ss_pred ChhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEe
Confidence 356889999999999999999987 47899999997543 456799999999999999999999997554 57899999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-Ccc
Q 011519 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-RSY 212 (484)
Q Consensus 134 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~-~~~ 212 (484)
|+++|+|.+++.......+++..++.++.|++.||.|||+. |++||||||+||+++.++.+||+|||++...... ...
T Consensus 96 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~ 174 (278)
T 1byg_A 96 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN-NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG 174 (278)
T ss_dssp CCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECTTSCEEECCCCC-----------
T ss_pred cCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhC-CccccCCCcceEEEeCCCcEEEeeccccccccccccCC
Confidence 99999999999743333489999999999999999999999 9999999999999999999999999998765443 344
Q ss_pred cCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHH
Q 011519 213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291 (484)
Q Consensus 213 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 291 (484)
.+++.|+|||.+.+..++.++||||||+++|+|+| |..||............. .......+...++.+.+++..
T Consensus 175 ~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~li~~ 249 (278)
T 1byg_A 175 KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE-----KGYKMDAPDGCPPAVYEVMKN 249 (278)
T ss_dssp -CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHT-----TTCCCCCCTTCCHHHHHHHHH
T ss_pred CccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHh-----cCCCCCCcccCCHHHHHHHHH
Confidence 67889999999998889999999999999999998 888876543222211111 111223445667899999999
Q ss_pred HhccCCCCCCChHHHHHHHHhhhcC
Q 011519 292 CLQYEPRERPNPRSLVTALVTLQKD 316 (484)
Q Consensus 292 cl~~dp~~Rps~~~il~~l~~~~~~ 316 (484)
||+.||.+|||+.++++.|+.+...
T Consensus 250 ~l~~~p~~Rps~~~l~~~L~~i~~~ 274 (278)
T 1byg_A 250 CWHLDAAMRPSFLQLREQLEHIKTH 274 (278)
T ss_dssp HTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HhcCChhhCCCHHHHHHHHHHHHhh
Confidence 9999999999999999999988653
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-45 Score=364.85 Aligned_cols=256 Identities=16% Similarity=0.179 Sum_probs=203.7
Q ss_pred CcccccccCCCCCCceEEEEEeCC------CcEEEEEEecCCCCcc-----------HHHHHHHHHHHhcCCCCceeeee
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLEN------QFRIAVKRFNRSAWPD-----------ARQFLEEARAVGQLRNRRLANLL 119 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~hpniv~l~ 119 (484)
..|.+++.||+|+||+||+|.+.. ++.||||++....... ...+..|+..+..++||||++++
T Consensus 35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~ 114 (364)
T 3op5_A 35 AAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYW 114 (364)
T ss_dssp CEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEE
T ss_pred CeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEE
Confidence 478899999999999999998644 4789999987654211 11244566677888999999999
Q ss_pred eeeeeC----CceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeec--CCC
Q 011519 120 GCCCEG----DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD--DDV 193 (484)
Q Consensus 120 ~~~~~~----~~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~--~~~ 193 (484)
+++... ...+|||||+ |++|.+++.. ..+.+++..++.|+.||+.||.|||+. ||+||||||+|||++ .++
T Consensus 115 ~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~-~~~~l~~~~~~~i~~qi~~~l~~lH~~-~iiHrDlkp~Nill~~~~~~ 191 (364)
T 3op5_A 115 GSGLHDKNGKSYRFMIMDRF-GSDLQKIYEA-NAKRFSRKTVLQLSLRILDILEYIHEH-EYVHGDIKASNLLLNYKNPD 191 (364)
T ss_dssp EEEEEEETTEEEEEEEEECE-EEEHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEEESSCTT
T ss_pred eeeeeccCCcceEEEEEeCC-CCCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHC-CeEEecCCHHHEEEecCCCC
Confidence 998775 4589999999 9999999975 346799999999999999999999999 999999999999999 889
Q ss_pred CceeeccCCccccCCC-----------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhh-
Q 011519 194 NPRLSCFGLMKNSRDG-----------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIR- 261 (484)
Q Consensus 194 ~~kl~DfG~a~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~- 261 (484)
.+||+|||+++..... ....||+.|+|||++.+..++.++|||||||++|||+||+.||.....+...
T Consensus 192 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~ 271 (364)
T 3op5_A 192 QVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYV 271 (364)
T ss_dssp CEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHH
T ss_pred eEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHH
Confidence 9999999999764321 2345899999999999988999999999999999999999988753211110
Q ss_pred -------hccccccccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhcCCC
Q 011519 262 -------DRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 318 (484)
Q Consensus 262 -------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~ 318 (484)
......+.+.++. ....+.++.+|+..||+.||.+||++.+|++.|+.+.....
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~ 332 (364)
T 3op5_A 272 RDSKIRYRENIASLMDKCFP---AANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIG 332 (364)
T ss_dssp HHHHHHHHHCHHHHHHHHSC---TTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHhhhhHHHHHHHhcc---cccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcC
Confidence 0111222222211 12345789999999999999999999999999998776543
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-45 Score=354.94 Aligned_cols=255 Identities=18% Similarity=0.297 Sum_probs=206.4
Q ss_pred cccccccCCCCCCceEEEEEe-----CCCcEEEEEEecCCCC-ccHHHHHHHHHHHhcCCCCceeeeeeeeeeC--CceE
Q 011519 58 MENIVSEHGEKAPNVVYKGKL-----ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEG--DERL 129 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~--~~~~ 129 (484)
.|++++.||+|+||.||+|++ .+++.||||++..... ...+.+.+|+.+++.++||||+++++++... ...+
T Consensus 22 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 101 (302)
T 4e5w_A 22 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK 101 (302)
T ss_dssp GEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEE
T ss_pred hhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEE
Confidence 478889999999999999983 4688999999975432 3357899999999999999999999999876 6689
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC
Q 011519 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 209 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 209 (484)
+||||+++|+|.+++.. ....+++..++.++.||+.||.|||+. |++||||||+|||++.++.+||+|||++......
T Consensus 102 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 179 (302)
T 4e5w_A 102 LIMEFLPSGSLKEYLPK-NKNKINLKQQLKYAVQICKGMDYLGSR-QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETD 179 (302)
T ss_dssp EEEECCTTCBHHHHHHH-HTTTCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEEETTEEEECCCTTCEECCTT
T ss_pred EEEEeCCCCcHHHHHHh-ccccCCHHHHHHHHHHHHHHHHHhhcC-CcccCCCchheEEEcCCCCEEECcccccccccCC
Confidence 99999999999999954 335699999999999999999999999 9999999999999999999999999999876543
Q ss_pred -------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhh----------hcccccccccc
Q 011519 210 -------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIR----------DRNIQTLTDSC 272 (484)
Q Consensus 210 -------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~----------~~~~~~~~~~~ 272 (484)
....+|..|+|||++.+..++.++||||||+++|+|+||..|+......... ...........
T Consensus 180 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (302)
T 4e5w_A 180 KEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEG 259 (302)
T ss_dssp CCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTT
T ss_pred CcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhcc
Confidence 2345677899999999888999999999999999999999765332111100 00011111111
Q ss_pred ccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhh
Q 011519 273 LEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQ 314 (484)
Q Consensus 273 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~ 314 (484)
.....+..+++.+.+|+.+||+.||.+|||+.++++.|+.+.
T Consensus 260 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 260 KRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 122345567789999999999999999999999999998764
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-45 Score=366.11 Aligned_cols=248 Identities=18% Similarity=0.229 Sum_probs=201.8
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCc--cHHHHHHHHHHHhcCC--CCceeeeeeeeeeCCceEEEE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLR--NRRLANLLGCCCEGDERLLVA 132 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~--hpniv~l~~~~~~~~~~~lv~ 132 (484)
..|.+++.||+|+||+||+|...+++.||||++...... ..+.+.+|+.+|..++ ||||+++++++...+..+|||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 358899999999999999999777999999999754332 3567999999999996 599999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC---
Q 011519 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--- 209 (484)
Q Consensus 133 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~--- 209 (484)
| +.+++|.+++.. ...+++.++..++.||+.||.|||+. ||+||||||+|||++ ++.+||+|||+++.....
T Consensus 136 E-~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~lH~~-~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~ 210 (390)
T 2zmd_A 136 E-CGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS 210 (390)
T ss_dssp E-CCSEEHHHHHHH--CSSCCHHHHHHHHHHHHHHHHHHHTT-TCCCCCCCGGGEEES-SSCEEECCCSSSCCC------
T ss_pred e-cCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCHHHEEEE-CCeEEEEecCccccccCCCcc
Confidence 9 568899999974 45789999999999999999999999 999999999999996 689999999999875432
Q ss_pred ---CcccCCCCCCCcccccC-----------CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccC
Q 011519 210 ---RSYSTNLAFTPPEYLRT-----------GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEG 275 (484)
Q Consensus 210 ---~~~~~t~~y~aPE~~~~-----------~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 275 (484)
....||+.|+|||++.+ ..++.++|||||||++|||++|..||........ .+..+.......
T Consensus 211 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~---~~~~~~~~~~~~ 287 (390)
T 2zmd_A 211 VVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS---KLHAIIDPNHEI 287 (390)
T ss_dssp ---CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH---HHHHHHCTTSCC
T ss_pred ccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHH---HHHHHhCccccC
Confidence 34578999999999875 3588899999999999999999998864321110 111112222222
Q ss_pred CCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHh
Q 011519 276 QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVT 312 (484)
Q Consensus 276 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~ 312 (484)
.++...+..+.+|+.+||..||.+|||+.+++++.+-
T Consensus 288 ~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~ 324 (390)
T 2zmd_A 288 EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV 324 (390)
T ss_dssp CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHH
T ss_pred CCCccchHHHHHHHHHHcccChhhCCCHHHHhhCcCc
Confidence 3344446789999999999999999999999998654
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-45 Score=370.82 Aligned_cols=251 Identities=16% Similarity=0.175 Sum_probs=186.2
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCC--ccHHHHHHHHHHHhcCCCCceeeeeeeeeeC-----Cce
Q 011519 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEG-----DER 128 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-----~~~ 128 (484)
.+|++++.||+|+||+||+|. ..+++.||||++..... ...+++.+|+.+|+.++|||||++++++... ..+
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 132 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence 468999999999999999999 45789999999975432 2356799999999999999999999998543 568
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC
Q 011519 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 208 (484)
Q Consensus 129 ~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~ 208 (484)
|+||||+ +|+|.+++. ....+++..+..++.||+.||.|||+. |||||||||+||||+.++.+||+|||+++....
T Consensus 133 ~lv~e~~-~~~L~~~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~-~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 208 (458)
T 3rp9_A 133 YVVLEIA-DSDFKKLFR--TPVYLTELHIKTLLYNLLVGVKYVHSA-GILHRDLKPANCLVNQDCSVKVCDFGLARTVDY 208 (458)
T ss_dssp EEEECCC-SEEHHHHHH--SSCCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTCCEEECCCTTCBCTTS
T ss_pred EEEEecc-ccchhhhcc--cCCCCCHHHHHHHHHHHHHHHHHHHhC-CcCCCCCChhhEEECCCCCEeecccccchhccC
Confidence 9999998 569999996 456799999999999999999999999 999999999999999999999999999986532
Q ss_pred -------------------------------CCcccCCCCCCCccccc-CCCCCCCCceeehHHHHHHHhh---------
Q 011519 209 -------------------------------GRSYSTNLAFTPPEYLR-TGRVTPESVMYSFGTLLLDLLS--------- 247 (484)
Q Consensus 209 -------------------------------~~~~~~t~~y~aPE~~~-~~~~~~~~Dv~slG~~l~el~t--------- 247 (484)
.....||+.|+|||++. +..++.++|||||||++|||+|
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~ 288 (458)
T 3rp9_A 209 PENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYH 288 (458)
T ss_dssp CTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSG
T ss_pred ccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhcccccccc
Confidence 12346799999999864 5669999999999999999999
Q ss_pred --CCCCCCchhh---------------------HH---hh---hccc---------------ccccccccc---CCCChH
Q 011519 248 --GKHIPPSHAL---------------------DL---IR---DRNI---------------QTLTDSCLE---GQFSSD 280 (484)
Q Consensus 248 --g~~p~~~~~~---------------------~~---~~---~~~~---------------~~~~~~~~~---~~~~~~ 280 (484)
|+++|++... +. +. .... ......... ....+.
T Consensus 289 ~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (458)
T 3rp9_A 289 ADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPA 368 (458)
T ss_dssp GGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTT
T ss_pred ccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCC
Confidence 5555544210 00 00 0000 000000000 001123
Q ss_pred HHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 281 EGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 281 ~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
.++++.+||.+||..||.+|||+.++++|-+
T Consensus 369 ~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~ 399 (458)
T 3rp9_A 369 SSADAIHLLKRMLVFNPNKRITINECLAHPF 399 (458)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHHHSGG
T ss_pred CCHHHHHHHHHHhccCccccCCHHHHhcCHh
Confidence 4688999999999999999999999999944
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-45 Score=350.52 Aligned_cols=254 Identities=20% Similarity=0.255 Sum_probs=210.4
Q ss_pred Ccccccc-cCCCCCCceEEEEEeC---CCcEEEEEEecCCCC-ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEE
Q 011519 57 AMENIVS-EHGEKAPNVVYKGKLE---NQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (484)
Q Consensus 57 ~~~~~~~-~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 131 (484)
..+.+++ .||+|+||+||+|... ++..||||+++.... ...+.+.+|+.+++.++||||+++++++ ..+..++|
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv 87 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV 87 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEE
Confidence 3566666 8999999999999843 578899999986543 2356799999999999999999999999 55679999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC--
Q 011519 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 209 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~-- 209 (484)
|||+++++|.+++.. ....+++..++.++.||+.||.|||+. |++||||||+||+++.++.+||+|||++......
T Consensus 88 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 165 (287)
T 1u59_A 88 MEMAGGGPLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEK-NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDS 165 (287)
T ss_dssp EECCTTEEHHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSC
T ss_pred EEeCCCCCHHHHHHh-CCccCCHHHHHHHHHHHHHHHHHHHHC-CEeeCCCchheEEEcCCCCEEECcccceeeeccCcc
Confidence 999999999999964 345699999999999999999999999 9999999999999999999999999999876432
Q ss_pred -----CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHH
Q 011519 210 -----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283 (484)
Q Consensus 210 -----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (484)
....+|+.|+|||++.+..++.++||||||+++|+|+| |..||............. .......+..+++
T Consensus 166 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~-----~~~~~~~~~~~~~ 240 (287)
T 1u59_A 166 YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIE-----QGKRMECPPECPP 240 (287)
T ss_dssp EECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHH-----TTCCCCCCTTCCH
T ss_pred eeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHh-----cCCcCCCCCCcCH
Confidence 22345788999999988889999999999999999999 998876543222211111 1112234556678
Q ss_pred HHHHHHHHHhccCCCCCCChHHHHHHHHhhhcCCC
Q 011519 284 ELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 318 (484)
Q Consensus 284 ~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~ 318 (484)
.+.+++..||+.||.+|||+.+++++|+.+.....
T Consensus 241 ~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 275 (287)
T 1u59_A 241 ELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLA 275 (287)
T ss_dssp HHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999998876543
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-46 Score=382.61 Aligned_cols=253 Identities=20% Similarity=0.258 Sum_probs=210.7
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCC---CccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEE
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 131 (484)
...|++++.||+|+||.||+|.. .+|+.||||++.... ......+.+|+.+|..++|||||++++++.+.+..++|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 35678888999999999999995 579999999996432 12355688999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC--
Q 011519 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 209 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~-- 209 (484)
|||++||+|.+++.......+++..++.++.||+.||.|||+. |||||||||+|||++.+|.+||+|||+++.....
T Consensus 263 mEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~-gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~ 341 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE-RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT 341 (576)
T ss_dssp ECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC
T ss_pred EEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CEeccCCchheEEEeCCCCeEEEecccceecccCcc
Confidence 9999999999999765555699999999999999999999999 9999999999999999999999999999876543
Q ss_pred -CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHH
Q 011519 210 -RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288 (484)
Q Consensus 210 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 288 (484)
....||+.|+|||++.+..++.++|||||||++|||++|..||........... +...+.. ....++...++++.+|
T Consensus 342 ~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~-i~~~i~~-~~~~~p~~~s~~~~dL 419 (576)
T 2acx_A 342 IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREE-VERLVKE-VPEEYSERFSPQARSL 419 (576)
T ss_dssp EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHH-HHHHHHH-CCCCCCTTSCHHHHHH
T ss_pred ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHH-HHHHhhc-ccccCCccCCHHHHHH
Confidence 345789999999999988899999999999999999999999875421100000 0000000 1123456677899999
Q ss_pred HHHHhccCCCCCC-----ChHHHHHHHH
Q 011519 289 ASRCLQYEPRERP-----NPRSLVTALV 311 (484)
Q Consensus 289 i~~cl~~dp~~Rp-----s~~~il~~l~ 311 (484)
|.+||..||.+|| ++.++++|-+
T Consensus 420 I~~lL~~dP~~R~g~~~~sa~eil~Hpf 447 (576)
T 2acx_A 420 CSQLLCKDPAERLGCRGGSAREVKEHPL 447 (576)
T ss_dssp HHHHTCSSGGGSTTCSSSHHHHHHTSGG
T ss_pred HHHhccCCHHHcCCCCCCCHHHHHhChh
Confidence 9999999999999 7899998843
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-45 Score=359.02 Aligned_cols=251 Identities=20% Similarity=0.172 Sum_probs=203.3
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCccHHHHHHHHHHHhcCC-----CCceeeeeeeeeeCCceEE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-----NRRLANLLGCCCEGDERLL 130 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----hpniv~l~~~~~~~~~~~l 130 (484)
..|.+++.||+|+||+||+|.. .+++.||||+++... ...+.+..|+.++..++ ||||+++++++...+..++
T Consensus 35 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~l 113 (360)
T 3llt_A 35 NAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK-KYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCL 113 (360)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCH-HHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEE
T ss_pred CEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccch-hhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEE
Confidence 4678889999999999999995 678999999997432 33456788999999996 9999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecC-------------------
Q 011519 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD------------------- 191 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~------------------- 191 (484)
||||+ +++|.+++.......+++..+..++.||+.||.|||+. ||+||||||+|||++.
T Consensus 114 v~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~ 191 (360)
T 3llt_A 114 IFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKM-SLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKI 191 (360)
T ss_dssp EECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEE
T ss_pred EEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCCcccEEEccccccccccchhcccccccc
Confidence 99999 88999999865656799999999999999999999999 9999999999999975
Q ss_pred ------CCCceeeccCCccccCC-CCcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcc
Q 011519 192 ------DVNPRLSCFGLMKNSRD-GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN 264 (484)
Q Consensus 192 ------~~~~kl~DfG~a~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~ 264 (484)
++.+||+|||++..... .....||+.|+|||++.+..++.++|||||||++|+|+||+.||............
T Consensus 192 ~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~ 271 (360)
T 3llt_A 192 QIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMM 271 (360)
T ss_dssp EEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred cccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHH
Confidence 78999999999987554 34567899999999999999999999999999999999999988653221110000
Q ss_pred c---c----------------ccc-cccccCCCC--------------------hHHHHHHHHHHHHHhccCCCCCCChH
Q 011519 265 I---Q----------------TLT-DSCLEGQFS--------------------SDEGTELVRLASRCLQYEPRERPNPR 304 (484)
Q Consensus 265 ~---~----------------~~~-~~~~~~~~~--------------------~~~~~~l~~li~~cl~~dp~~Rps~~ 304 (484)
. . ... .......++ ...++.+.+|+.+||+.||.+|||+.
T Consensus 272 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~ 351 (360)
T 3llt_A 272 ESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPA 351 (360)
T ss_dssp HHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHH
T ss_pred HHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHH
Confidence 0 0 000 000000000 01126788999999999999999999
Q ss_pred HHHHHH
Q 011519 305 SLVTAL 310 (484)
Q Consensus 305 ~il~~l 310 (484)
++++|-
T Consensus 352 elL~hp 357 (360)
T 3llt_A 352 ELLKHK 357 (360)
T ss_dssp HHTTSG
T ss_pred HHhcCc
Confidence 999873
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-45 Score=352.21 Aligned_cols=250 Identities=15% Similarity=0.158 Sum_probs=206.6
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecC
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~ 135 (484)
..|.+++.||+|+||+||+|.. .+|+.||||+++.......+.+.+|+.+++.++||||+++++++.+.+..++||||+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 88 (304)
T 2jam_A 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLV 88 (304)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcC
Confidence 3678889999999999999995 578999999998655444567899999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceee---cCCCCceeeccCCccccCCC--C
Q 011519 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF---DDDVNPRLSCFGLMKNSRDG--R 210 (484)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill---~~~~~~kl~DfG~a~~~~~~--~ 210 (484)
++++|.+++.. .+.+++..++.++.||+.||.|||+. |++||||||+||++ +.++.+||+|||++...... .
T Consensus 89 ~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~ 165 (304)
T 2jam_A 89 SGGELFDRILE--RGVYTEKDASLVIQQVLSAVKYLHEN-GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMS 165 (304)
T ss_dssp CSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTTH
T ss_pred CCccHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCccc
Confidence 99999999863 45689999999999999999999999 99999999999999 78899999999998765443 2
Q ss_pred cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHH
Q 011519 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (484)
Q Consensus 211 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (484)
...||+.|+|||++.+..++.++||||||+++|+|++|..||.................. .........++.+.+|+.
T Consensus 166 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~li~ 243 (304)
T 2jam_A 166 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYE--FESPFWDDISESAKDFIC 243 (304)
T ss_dssp HHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCC--CCTTTTTTSCHHHHHHHH
T ss_pred cccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCC--CCccccccCCHHHHHHHH
Confidence 346899999999999888999999999999999999999988654332222111111110 111233456788999999
Q ss_pred HHhccCCCCCCChHHHHHHHH
Q 011519 291 RCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~l~ 311 (484)
+||..||.+|||+.+++++.+
T Consensus 244 ~~l~~dp~~Rps~~~~l~h~~ 264 (304)
T 2jam_A 244 HLLEKDPNERYTCEKALSHPW 264 (304)
T ss_dssp HHHCSSTTTSCCHHHHHTSHH
T ss_pred HHcCCChhHCcCHHHHhcCcc
Confidence 999999999999999998855
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-45 Score=350.51 Aligned_cols=255 Identities=22% Similarity=0.293 Sum_probs=204.9
Q ss_pred CCcccccccCCCCCCceEEEEEeCC----CcEEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCceeeeeeeee-eCCceE
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKLEN----QFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCC-EGDERL 129 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~-~~~~~~ 129 (484)
...|++.+.||+|+||+||+|...+ ...||||.+...... ..+.+.+|+.++++++||||+++++++. ..+..+
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 103 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 103 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceE
Confidence 3467888999999999999998532 236899999764432 3567999999999999999999999864 556789
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC
Q 011519 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 209 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 209 (484)
+||||+++|+|.+++.. ....+++..++.++.||+.||.|||+. |++||||||+|||++.++.+||+|||+++.....
T Consensus 104 ~v~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~ql~~~l~~lH~~-~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 181 (298)
T 3f66_A 104 VVLPYMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKYLASK-KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 181 (298)
T ss_dssp EEEECCTTCBHHHHHHC-TTCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCG
T ss_pred EEEeCCCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCchheEEECCCCCEEECccccccccccc
Confidence 99999999999999964 445689999999999999999999999 9999999999999999999999999999865332
Q ss_pred --------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCch-hhHHhhhccccccccccccCCCChH
Q 011519 210 --------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH-ALDLIRDRNIQTLTDSCLEGQFSSD 280 (484)
Q Consensus 210 --------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (484)
....+|+.|+|||.+.+..++.++||||||+++|+|++|..|+... .......... .......+..
T Consensus 182 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 256 (298)
T 3f66_A 182 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-----QGRRLLQPEY 256 (298)
T ss_dssp GGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHH-----TTCCCCCCTT
T ss_pred chhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHh-----cCCCCCCCcc
Confidence 2345678899999999889999999999999999999966554322 1111110000 0111122344
Q ss_pred HHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhcCC
Q 011519 281 EGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (484)
Q Consensus 281 ~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 317 (484)
.+..+.+++.+||+.||.+|||+.++++.|+.+....
T Consensus 257 ~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~ 293 (298)
T 3f66_A 257 CPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 293 (298)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTS
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 5678999999999999999999999999999987654
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-46 Score=369.71 Aligned_cols=255 Identities=18% Similarity=0.130 Sum_probs=206.4
Q ss_pred hcCCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCC---ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCce
Q 011519 53 TSGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDER 128 (484)
Q Consensus 53 ~~~f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 128 (484)
.-...+|++++.||+|+||+||+|+. .+++.||||+++.... ...+.+.+|..++..++||||+++++++.+.+..
T Consensus 57 ~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~ 136 (412)
T 2vd5_A 57 RLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYL 136 (412)
T ss_dssp SCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEE
T ss_pred cCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEE
Confidence 34456788889999999999999995 5799999999964321 1233488999999999999999999999999999
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC
Q 011519 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 208 (484)
Q Consensus 129 ~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~ 208 (484)
+|||||++||+|.+++.+. +..+++..+..++.||+.||.|||+. |||||||||+|||++.++.+||+|||+++....
T Consensus 137 ~lVmE~~~gg~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~-giiHrDLKp~NILld~~g~vkL~DFGla~~~~~ 214 (412)
T 2vd5_A 137 YLVMEYYVGGDLLTLLSKF-GERIPAEMARFYLAEIVMAIDSVHRL-GYVHRDIKPDNILLDRCGHIRLADFGSCLKLRA 214 (412)
T ss_dssp EEEECCCCSCBHHHHHHHH-SSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEEEcCCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecccCHHHeeecCCCCEEEeechhheeccC
Confidence 9999999999999999642 34699999999999999999999999 999999999999999999999999999987654
Q ss_pred C-----CcccCCCCCCCccccc-------CCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCC
Q 011519 209 G-----RSYSTNLAFTPPEYLR-------TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQ 276 (484)
Q Consensus 209 ~-----~~~~~t~~y~aPE~~~-------~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (484)
. ....||+.|+|||++. +..++.++|||||||++|||++|+.||................ .......
T Consensus 215 ~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~-~~~~~p~ 293 (412)
T 2vd5_A 215 DGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYK-EHLSLPL 293 (412)
T ss_dssp TSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHH-HHCCCC-
T ss_pred CCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcc-cCcCCCc
Confidence 3 2357899999999997 3568999999999999999999999987654332222111100 0000111
Q ss_pred CChHHHHHHHHHHHHHhccCCCCC---CChHHHHHHHH
Q 011519 277 FSSDEGTELVRLASRCLQYEPRER---PNPRSLVTALV 311 (484)
Q Consensus 277 ~~~~~~~~l~~li~~cl~~dp~~R---ps~~~il~~l~ 311 (484)
.+..+++++.+||.+||. +|.+| |++.++++|-+
T Consensus 294 ~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpf 330 (412)
T 2vd5_A 294 VDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPF 330 (412)
T ss_dssp ---CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGG
T ss_pred cccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCC
Confidence 224467899999999999 99998 69999998843
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-45 Score=352.53 Aligned_cols=249 Identities=17% Similarity=0.168 Sum_probs=199.0
Q ss_pred ccccc-ccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCccHHHHHHHHHHHhcC-CCCceeeeeeeeeeCCceEEEEec
Q 011519 58 MENIV-SEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEY 134 (484)
Q Consensus 58 ~~~~~-~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~Ey 134 (484)
.|.++ +.||+|+||+||+|. ..+++.||||++..........+.+|+.++.++ +||||+++++++.+.+..++||||
T Consensus 13 ~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~ 92 (316)
T 2ac3_A 13 VYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEK 92 (316)
T ss_dssp SCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred eEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEc
Confidence 56775 568999999999999 567899999999876555577899999999985 799999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCC---ceeeccCCccccCCC--
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN---PRLSCFGLMKNSRDG-- 209 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~---~kl~DfG~a~~~~~~-- 209 (484)
+++|+|.+++.. ...+++..+..++.||+.||.|||+. ||+||||||+|||++.++. +||+|||++......
T Consensus 93 ~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~ 169 (316)
T 2ac3_A 93 MRGGSILSHIHK--RRHFNELEASVVVQDVASALDFLHNK-GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGD 169 (316)
T ss_dssp CTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-------
T ss_pred CCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhC-CceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCc
Confidence 999999999973 35699999999999999999999999 9999999999999997766 999999998764321
Q ss_pred ---------CcccCCCCCCCcccccC-----CCCCCCCceeehHHHHHHHhhCCCCCCchhhHH-----------hhhcc
Q 011519 210 ---------RSYSTNLAFTPPEYLRT-----GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDL-----------IRDRN 264 (484)
Q Consensus 210 ---------~~~~~t~~y~aPE~~~~-----~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~-----------~~~~~ 264 (484)
....||+.|+|||++.+ ..++.++|||||||++|+|++|..||....... .....
T Consensus 170 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 249 (316)
T 2ac3_A 170 CSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNML 249 (316)
T ss_dssp ------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHH
T ss_pred cccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHH
Confidence 23458999999999875 458899999999999999999999886431100 00000
Q ss_pred ccccccccccCCCC----hHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 265 IQTLTDSCLEGQFS----SDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 265 ~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
...+.... ..++ ...+..+.+|+.+||..||.+|||+.++++|-+
T Consensus 250 ~~~i~~~~--~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~ 298 (316)
T 2ac3_A 250 FESIQEGK--YEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPW 298 (316)
T ss_dssp HHHHHHCC--CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTT
T ss_pred HHHHhccC--cccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChh
Confidence 00000000 0122 134678999999999999999999999999844
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-45 Score=357.57 Aligned_cols=251 Identities=19% Similarity=0.192 Sum_probs=208.8
Q ss_pred HHHHHHHhcCC-CcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCc--------cHHHHHHHHHHHhcCCCCce
Q 011519 46 IETLRTATSGF-AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--------DARQFLEEARAVGQLRNRRL 115 (484)
Q Consensus 46 ~~~~~~~~~~f-~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~hpni 115 (484)
+..+....+.| .+|.+++.||+|+||+||+|. ..+++.||||+++..... ....+.+|+.++++++||||
T Consensus 12 ~~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~I 91 (335)
T 3dls_A 12 LEGLAACEGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANI 91 (335)
T ss_dssp CCHHHHHTTHHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTB
T ss_pred ccccccCCcccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCE
Confidence 33444444433 478899999999999999999 567899999999765321 23357789999999999999
Q ss_pred eeeeeeeeeCCceEEEEecCCCC-CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCC
Q 011519 116 ANLLGCCCEGDERLLVAEYMPND-TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN 194 (484)
Q Consensus 116 v~l~~~~~~~~~~~lv~Ey~~~g-sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~ 194 (484)
+++++++.+.+..++||||+.+| +|.+++. ....+++..++.++.||+.||.|||+. ||+||||||+|||++.++.
T Consensus 92 v~~~~~~~~~~~~~lv~e~~~~g~~l~~~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dlkp~NIll~~~~~ 168 (335)
T 3dls_A 92 IKVLDIFENQGFFQLVMEKHGSGLDLFAFID--RHPRLDEPLASYIFRQLVSAVGYLRLK-DIIHRDIKDENIVIAEDFT 168 (335)
T ss_dssp CCEEEEEECSSEEEEEEECCTTSCBHHHHHH--TCCCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTSC
T ss_pred eeEEEEEeeCCEEEEEEEeCCCCccHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhC-CeEEeccCHHHEEEcCCCc
Confidence 99999999999999999999776 9999997 445799999999999999999999999 9999999999999999999
Q ss_pred ceeeccCCccccCCC---CcccCCCCCCCcccccCCCC-CCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcccccccc
Q 011519 195 PRLSCFGLMKNSRDG---RSYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTD 270 (484)
Q Consensus 195 ~kl~DfG~a~~~~~~---~~~~~t~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~ 270 (484)
+||+|||++...... ....||+.|+|||++.+..+ +.++|||||||++|+|++|..||..... ...
T Consensus 169 ~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~------~~~---- 238 (335)
T 3dls_A 169 IKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE------TVE---- 238 (335)
T ss_dssp EEECCCTTCEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG------GTT----
T ss_pred EEEeecccceECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH------HHh----
Confidence 999999999876543 24568999999999988776 7899999999999999999998864211 000
Q ss_pred ccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 271 SCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 271 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
.. ...+...++++.+|+.+||+.||.+|||+.+++++.+
T Consensus 239 ~~--~~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~hp~ 277 (335)
T 3dls_A 239 AA--IHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTDPW 277 (335)
T ss_dssp TC--CCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHCTT
T ss_pred hc--cCCCcccCHHHHHHHHHHccCChhhCcCHHHHhcCcc
Confidence 00 1123335678999999999999999999999999854
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-45 Score=380.89 Aligned_cols=253 Identities=24% Similarity=0.334 Sum_probs=212.3
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCC
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~ 136 (484)
..+++.+.||+|+||+||+|.+.++..||||+++... ...+.|.+|+.+|++++||||+++++++.+ +..+|||||++
T Consensus 267 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~ 344 (535)
T 2h8h_A 267 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMS 344 (535)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCT
T ss_pred hhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhc
Confidence 4567888899999999999998888889999998654 345789999999999999999999999876 67899999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-----Cc
Q 011519 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----RS 211 (484)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~-----~~ 211 (484)
+|+|.++|....+..+++..++.|+.||+.||.|||++ +||||||||+|||++.++.+||+|||+++..... ..
T Consensus 345 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~ 423 (535)
T 2h8h_A 345 KGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM-NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQG 423 (535)
T ss_dssp TEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTCS
T ss_pred CCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecccC
Confidence 99999999643445699999999999999999999999 9999999999999999999999999999876432 23
Q ss_pred ccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHH
Q 011519 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (484)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (484)
..+++.|+|||++.+..++.++|||||||++|||+| |..||............. ...+...+..++..+.+||.
T Consensus 424 ~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~-----~~~~~~~~~~~~~~l~~li~ 498 (535)
T 2h8h_A 424 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE-----RGYRMPCPPECPESLHDLMC 498 (535)
T ss_dssp TTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHH-----TTCCCCCCTTCCHHHHHHHH
T ss_pred CcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-----cCCCCCCCCCCCHHHHHHHH
Confidence 445778999999998899999999999999999999 888876543222211111 11122234566788999999
Q ss_pred HHhccCCCCCCChHHHHHHHHhhhcCC
Q 011519 291 RCLQYEPRERPNPRSLVTALVTLQKDT 317 (484)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~l~~~~~~~ 317 (484)
+||+.||++|||+.+|++.|+.+....
T Consensus 499 ~cl~~dP~~RPt~~~l~~~L~~~~~~~ 525 (535)
T 2h8h_A 499 QCWRKEPEERPTFEYLQAFLEDYFTST 525 (535)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHTSSCCC
T ss_pred HHcCCChhHCcCHHHHHHHHHHHhhcc
Confidence 999999999999999999999876543
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-45 Score=359.70 Aligned_cols=242 Identities=17% Similarity=0.208 Sum_probs=181.8
Q ss_pred ccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCccHHHHHHHHHHHhcCC-CCceeeeeeeeeeCCceEEEEecCCCCCH
Q 011519 63 SEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVAEYMPNDTL 140 (484)
Q Consensus 63 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~lv~Ey~~~gsL 140 (484)
+.||+|+||+||+|.. .+++.||||++... ....+.+|+.++..+. ||||+++++++.+....++||||+++|+|
T Consensus 17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 93 (325)
T 3kn6_A 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGEL 93 (325)
T ss_dssp CCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcH
Confidence 6789999999999995 57899999999643 3567889999999997 99999999999999999999999999999
Q ss_pred HhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCC---CceeeccCCccccCCC----Cccc
Q 011519 141 AKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV---NPRLSCFGLMKNSRDG----RSYS 213 (484)
Q Consensus 141 ~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~---~~kl~DfG~a~~~~~~----~~~~ 213 (484)
.+++.. .+.+++.++..++.||+.||.|||+. ||+||||||+|||++.++ .+||+|||+++..... ....
T Consensus 94 ~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~-~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 170 (325)
T 3kn6_A 94 FERIKK--KKHFSETEASYIMRKLVSAVSHMHDV-GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPC 170 (325)
T ss_dssp HHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC---------
T ss_pred HHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcccccC
Confidence 999974 46799999999999999999999999 999999999999998665 7999999999865433 3456
Q ss_pred CCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCC--CC----hHHHHHHHH
Q 011519 214 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQ--FS----SDEGTELVR 287 (484)
Q Consensus 214 ~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~----~~~~~~l~~ 287 (484)
+|+.|+|||++.+..++.++|||||||++|+|++|..||......... .....+......+. ++ ..+++++.+
T Consensus 171 ~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~ 249 (325)
T 3kn6_A 171 FTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTC-TSAVEIMKKIKKGDFSFEGEAWKNVSQEAKD 249 (325)
T ss_dssp -------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------C-CCHHHHHHHHTTTCCCCCSHHHHTSCHHHHH
T ss_pred CCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCcccccc-ccHHHHHHHHHcCCCCCCcccccCCCHHHHH
Confidence 789999999999889999999999999999999999988653221100 00001111111111 11 235788999
Q ss_pred HHHHHhccCCCCCCChHHHHHHHH
Q 011519 288 LASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 288 li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
|+.+||..||.+|||+.++++|-+
T Consensus 250 li~~~L~~dP~~Rpt~~ell~h~w 273 (325)
T 3kn6_A 250 LIQGLLTVDPNKRLKMSGLRYNEW 273 (325)
T ss_dssp HHHHHHCCCTTTCCCTTTSTTCGG
T ss_pred HHHHHCCCChhHCCCHHHHhcChh
Confidence 999999999999999999998754
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-45 Score=361.67 Aligned_cols=254 Identities=22% Similarity=0.284 Sum_probs=196.5
Q ss_pred cccccccCCCCCCceEEEEEeC--C--CcEEEEEEecCCCC-ccHHHHHHHHHHHhcCCCCceeeeeeeeee-CCceEEE
Q 011519 58 MENIVSEHGEKAPNVVYKGKLE--N--QFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCE-GDERLLV 131 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~~--~--~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~~~~~lv 131 (484)
.|++.+.||+|+||+||+|... + +..||||.++.... ...+.|.+|+.++++++||||+++++++.. .+..++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 4566788999999999999842 2 24689999875432 346789999999999999999999998654 5678999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC--
Q 011519 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 209 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~-- 209 (484)
|||+++|+|.+++.. ....+++..++.++.||+.||.|||+. ||+||||||+|||++.++.+||+|||+++.....
T Consensus 170 ~e~~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~ 247 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKFLASK-KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF 247 (373)
T ss_dssp EECCTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTCCEEECCC-----------
T ss_pred EECCCCCCHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHHHC-CEecCccchheEEECCCCCEEEeecccccccccccc
Confidence 999999999999964 345689999999999999999999999 9999999999999999999999999999864322
Q ss_pred ------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCC-CCCCchhhHHhhhccccccccccccCCCChHHH
Q 011519 210 ------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGK-HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG 282 (484)
Q Consensus 210 ------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (484)
....+|+.|+|||++.+..++.++|||||||++|||+||. .||........... .........+..++
T Consensus 248 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~-----~~~~~~~~~p~~~~ 322 (373)
T 3c1x_A 248 DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY-----LLQGRRLLQPEYCP 322 (373)
T ss_dssp ----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHH-----HHTTCCCCCCTTCC
T ss_pred ccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHH-----HHcCCCCCCCCCCC
Confidence 2334567899999999889999999999999999999954 44433211111000 00011112344566
Q ss_pred HHHHHHHHHHhccCCCCCCChHHHHHHHHhhhcCCC
Q 011519 283 TELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 318 (484)
Q Consensus 283 ~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~ 318 (484)
..+.+++.+||+.||++|||+.++++.|+.+.....
T Consensus 323 ~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~ 358 (373)
T 3c1x_A 323 DPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 358 (373)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcc
Confidence 889999999999999999999999999999876543
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-45 Score=347.87 Aligned_cols=248 Identities=16% Similarity=0.144 Sum_probs=209.1
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCC---ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEE
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 131 (484)
..+|.+.+.||+|+||+||++.. .+++.||+|++..... ...+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 45788889999999999999995 4688999999865432 2355788999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC---
Q 011519 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD--- 208 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~--- 208 (484)
|||+++++|.+++.. ...+++..++.++.||+.||.|||+. |++||||||+|||++.++.+||+|||++.....
T Consensus 94 ~e~~~~~~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 170 (294)
T 2rku_A 94 LELCRRRSLLELHKR--RKALTEPEARYYLRQIVLGCQYLHRN-RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 170 (294)
T ss_dssp EECCTTCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred EecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCChHhEEEcCCCCEEEEeccCceecccCcc
Confidence 999999999999863 45799999999999999999999999 999999999999999999999999999987542
Q ss_pred -CCcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHH
Q 011519 209 -GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287 (484)
Q Consensus 209 -~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (484)
.....||+.|+|||++.+..++.++||||||+++|+|+||..||.............. . ....+...++.+.+
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~----~--~~~~~~~~~~~~~~ 244 (294)
T 2rku_A 171 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKK----N--EYSIPKHINPVAAS 244 (294)
T ss_dssp CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHT----T--CCCCCTTSCHHHHH
T ss_pred ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhh----c--cCCCccccCHHHHH
Confidence 2345689999999999988899999999999999999999998875433222111111 0 11234556688999
Q ss_pred HHHHHhccCCCCCCChHHHHHHHHh
Q 011519 288 LASRCLQYEPRERPNPRSLVTALVT 312 (484)
Q Consensus 288 li~~cl~~dp~~Rps~~~il~~l~~ 312 (484)
++.+||+.||++|||+.+++++.+-
T Consensus 245 li~~~l~~~p~~Rps~~~ll~~~~~ 269 (294)
T 2rku_A 245 LIQKMLQTDPTARPTINELLNDEFF 269 (294)
T ss_dssp HHHHHTCSSGGGSCCGGGGGGSHHH
T ss_pred HHHHHcccChhhCcCHHHHhhChhe
Confidence 9999999999999999999998553
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-45 Score=349.31 Aligned_cols=245 Identities=18% Similarity=0.201 Sum_probs=205.3
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCC--ccHHHHHHHHHHHhcC-CCCceeeeeeeeeeCCceEEEE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVA 132 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~ 132 (484)
.+|++++.||+|+||+||+|.. .+++.||||+++.... .....+.+|+..+..+ +||||+++++++.+.+..++||
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~ 90 (289)
T 1x8b_A 11 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQN 90 (289)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEE
T ss_pred chhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 3678889999999999999995 4789999999976432 2356789999999999 8999999999999999999999
Q ss_pred ecCCCCCHHhhhccCC--CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCC------------------
Q 011519 133 EYMPNDTLAKHLFHWE--TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD------------------ 192 (484)
Q Consensus 133 Ey~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~------------------ 192 (484)
||+++|+|.+++.... ...+++..++.++.||+.||.|||+. ||+||||||+|||++.+
T Consensus 91 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~ 169 (289)
T 1x8b_A 91 EYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM-SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASN 169 (289)
T ss_dssp ECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEC--------------------
T ss_pred EecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC-CEeecCCCHHHEEEcCCCCCcccccccccccccCC
Confidence 9999999999996421 25689999999999999999999999 99999999999999844
Q ss_pred -CCceeeccCCccccCCCCcccCCCCCCCcccccCC-CCCCCCceeehHHHHHHHhhCCCCCCchhh-HHhhhccccccc
Q 011519 193 -VNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHAL-DLIRDRNIQTLT 269 (484)
Q Consensus 193 -~~~kl~DfG~a~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~-~~~~~~~~~~~~ 269 (484)
..+||+|||++..........||+.|+|||++.+. .++.++|||||||++|+|++|..++..... .......
T Consensus 170 ~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~----- 244 (289)
T 1x8b_A 170 KVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWHEIRQGR----- 244 (289)
T ss_dssp CCCEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHHHHHHTTC-----
T ss_pred ceEEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHHHHHHcCC-----
Confidence 47999999999988877777899999999999865 567899999999999999999976543321 1111111
Q ss_pred cccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 270 DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 270 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
....+..+++.+.+|+.+||+.||.+|||+.++++|-+
T Consensus 245 ----~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~ 282 (289)
T 1x8b_A 245 ----LPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSV 282 (289)
T ss_dssp ----CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCTT
T ss_pred ----CCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhChH
Confidence 12234456788999999999999999999999998743
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-45 Score=349.09 Aligned_cols=250 Identities=17% Similarity=0.207 Sum_probs=189.8
Q ss_pred cCCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCC---ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceE
Q 011519 54 SGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129 (484)
Q Consensus 54 ~~f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 129 (484)
..+.+|.+++.||+|+||.||+|.. .+++.||||++..... ...+.+.+|+.++.+++||||+++++++.+.+..+
T Consensus 8 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 87 (278)
T 3cok_A 8 EKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVY 87 (278)
T ss_dssp SSGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEE
T ss_pred cccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEE
Confidence 3467889999999999999999995 6789999999964321 12467899999999999999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC
Q 011519 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 209 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 209 (484)
+||||+++++|.+++.. ....+++..++.++.||+.||.|||+. |++||||||+||+++.++.+||+|||++......
T Consensus 88 lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 165 (278)
T 3cok_A 88 LVLEMCHNGEMNRYLKN-RVKPFSENEARHFMHQIITGMLYLHSH-GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMP 165 (278)
T ss_dssp EEEECCTTEEHHHHHHT-CSSCCCHHHHHHHHHHHHHHHHHHHHT-TEECSSCCGGGEEECTTCCEEECCCTTCEECC--
T ss_pred EEEecCCCCcHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHEEEcCCCCEEEEeecceeeccCC
Confidence 99999999999999964 345799999999999999999999999 9999999999999999999999999999875432
Q ss_pred ----CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHH
Q 011519 210 ----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 285 (484)
Q Consensus 210 ----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 285 (484)
....||+.|+|||.+.+..++.++||||||+++|+|++|+.||............ ... ....+...+.++
T Consensus 166 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~----~~~--~~~~~~~~~~~~ 239 (278)
T 3cok_A 166 HEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKV----VLA--DYEMPSFLSIEA 239 (278)
T ss_dssp --------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----C----CSS--CCCCCTTSCHHH
T ss_pred CCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHH----hhc--ccCCccccCHHH
Confidence 2456899999999999888999999999999999999999987654221111111 100 112345567889
Q ss_pred HHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 286 VRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 286 ~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
.+|+.+||+.||++|||+.+++++-+
T Consensus 240 ~~li~~~l~~dp~~Rps~~~~l~h~~ 265 (278)
T 3cok_A 240 KDLIHQLLRRNPADRLSLSSVLDHPF 265 (278)
T ss_dssp HHHHHHHSCSSGGGSCCHHHHTTSTT
T ss_pred HHHHHHHcccCHhhCCCHHHHhcCcc
Confidence 99999999999999999999998743
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-45 Score=377.85 Aligned_cols=253 Identities=17% Similarity=0.216 Sum_probs=208.8
Q ss_pred CCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCC---ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEE
Q 011519 55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (484)
Q Consensus 55 ~f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 130 (484)
....|++++.||+|+||+||+|+. .+|+.||||++..... .....+.+|+.+|++++||||+++++++.+.+..++
T Consensus 183 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 262 (543)
T 3c4z_A 183 GEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCL 262 (543)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred ChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEE
Confidence 346778888899999999999995 5799999999964321 234678999999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCC--CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC
Q 011519 131 VAEYMPNDTLAKHLFHWE--TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 208 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~ 208 (484)
||||++||+|.+++.... ...+++..++.++.||+.||.|||+. ||+||||||+|||++.+|.+||+|||+++....
T Consensus 263 VmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~-gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~ 341 (543)
T 3c4z_A 263 VMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR-NIIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341 (543)
T ss_dssp EECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc-CCcccCCChHHEEEeCCCCEEEeecceeeeccC
Confidence 999999999999996433 45699999999999999999999999 999999999999999999999999999987644
Q ss_pred C----CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHH
Q 011519 209 G----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTE 284 (484)
Q Consensus 209 ~----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (484)
. ....||+.|+|||++.+..++.++|||||||++|||+||..||...............+... ...++..+++.
T Consensus 342 ~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~--~~~~p~~~s~~ 419 (543)
T 3c4z_A 342 GQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQ--AVTYPDKFSPA 419 (543)
T ss_dssp TCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHC--CCCCCTTSCHH
T ss_pred CCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhc--ccCCCcccCHH
Confidence 3 23589999999999999899999999999999999999999987542100000000111111 12345667789
Q ss_pred HHHHHHHHhccCCCCCCCh-----HHHHHHH
Q 011519 285 LVRLASRCLQYEPRERPNP-----RSLVTAL 310 (484)
Q Consensus 285 l~~li~~cl~~dp~~Rps~-----~~il~~l 310 (484)
+.+||.+||+.||.+||++ .+|++|-
T Consensus 420 ~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hp 450 (543)
T 3c4z_A 420 SKDFCEALLQKDPEKRLGFRDGSCDGLRTHP 450 (543)
T ss_dssp HHHHHHHHSCSSGGGSCCCBTTBSHHHHTSG
T ss_pred HHHHHHHhccCCHhHCCCCcccCHHHHHcCc
Confidence 9999999999999999964 7788763
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-45 Score=354.54 Aligned_cols=257 Identities=18% Similarity=0.200 Sum_probs=206.4
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeee----CCceEE
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE----GDERLL 130 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~----~~~~~l 130 (484)
-.+|++++.||+|+||.||++.. .+++.||||++........+.+.+|+.+++.++||||+++++++.. ....++
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 107 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL 107 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence 35788999999999999999995 6789999999876554556789999999999999999999999863 347899
Q ss_pred EEecCCCCCHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC
Q 011519 131 VAEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 208 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~ 208 (484)
||||+++|+|.+++... .+..+++..++.++.||+.||.|||+. |++||||||+|||++.++.+||+|||++.....
T Consensus 108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~-~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~ 186 (317)
T 2buj_A 108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK-GYAHRDLKPTNILLGDEGQPVLMDLGSMNQACI 186 (317)
T ss_dssp EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTSCEEECCCSSCEESCE
T ss_pred EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEEcCCCCEEEEecCcchhccc
Confidence 99999999999999642 346799999999999999999999999 999999999999999999999999999876432
Q ss_pred C-------------CcccCCCCCCCcccccCCC---CCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcccccccccc
Q 011519 209 G-------------RSYSTNLAFTPPEYLRTGR---VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSC 272 (484)
Q Consensus 209 ~-------------~~~~~t~~y~aPE~~~~~~---~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 272 (484)
. ....||+.|+|||++.+.. ++.++||||||+++|+|++|..||...... ...........
T Consensus 187 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~---~~~~~~~~~~~ 263 (317)
T 2buj_A 187 HVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQK---GDSVALAVQNQ 263 (317)
T ss_dssp EEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHT---TSCHHHHHHCC
T ss_pred ccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcc---cchhhHHhhcc
Confidence 1 1234689999999987654 689999999999999999999887432110 00000001111
Q ss_pred ccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhcC
Q 011519 273 LEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316 (484)
Q Consensus 273 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 316 (484)
.....+...+..+.+|+.+||+.||.+|||+.+++++|+.+...
T Consensus 264 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~ 307 (317)
T 2buj_A 264 LSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPP 307 (317)
T ss_dssp --CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCC
T ss_pred CCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCC
Confidence 11122345568899999999999999999999999999987643
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-45 Score=352.69 Aligned_cols=252 Identities=19% Similarity=0.211 Sum_probs=200.4
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCcc--HHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEE
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 132 (484)
+.+|++++.||+|+||+||+|.. .+++.||||++....... .+.+.+|+.++++++||||+++++++...+..++||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF 81 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence 35788999999999999999995 568999999987654332 456889999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC---
Q 011519 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--- 209 (484)
Q Consensus 133 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~--- 209 (484)
||+++++|.+++. ..+.+++..+..++.|++.||.|||+. |++||||||+|||++.++.+||+|||++......
T Consensus 82 e~~~~~~l~~~~~--~~~~~~~~~~~~i~~~l~~~l~~lH~~-~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 158 (311)
T 4agu_A 82 EYCDHTVLHELDR--YQRGVPEHLVKSITWQTLQAVNFCHKH-NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDY 158 (311)
T ss_dssp ECCSEEHHHHHHH--TSSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred EeCCCchHHHHHh--hhcCCCHHHHHHHHHHHHHHHHHHHHC-CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccc
Confidence 9999999999886 445699999999999999999999999 9999999999999999999999999999875532
Q ss_pred -CcccCCCCCCCcccccC-CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccc--------------------cc
Q 011519 210 -RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI--------------------QT 267 (484)
Q Consensus 210 -~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~--------------------~~ 267 (484)
....+|+.|+|||++.+ ..++.++||||||+++|+|+||..||............. ..
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (311)
T 4agu_A 159 YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSG 238 (311)
T ss_dssp -------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTT
T ss_pred cCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccccccccccc
Confidence 34568899999999976 568999999999999999999999887542221110000 00
Q ss_pred cccccccCC-----CChHHHHHHHHHHHHHhccCCCCCCChHHHHHHH
Q 011519 268 LTDSCLEGQ-----FSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 268 ~~~~~~~~~-----~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 310 (484)
...+..... .....+..+.+|+.+||+.||.+|||+.++++|-
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 286 (311)
T 4agu_A 239 VKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHP 286 (311)
T ss_dssp CCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSG
T ss_pred CcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcCh
Confidence 000000000 0123567899999999999999999999999983
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-45 Score=365.55 Aligned_cols=249 Identities=21% Similarity=0.291 Sum_probs=191.5
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCC--ccHHHHHHHHHHHhcCC-CCceeeeeeeeeeCC--ceEE
Q 011519 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLR-NRRLANLLGCCCEGD--ERLL 130 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~--~~~l 130 (484)
.+|++++.||+|+||+||+|. ..+++.||||++..... ...+.+.+|+.++..+. ||||+++++++...+ ..++
T Consensus 9 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~l 88 (388)
T 3oz6_A 9 RKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYL 88 (388)
T ss_dssp TTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEE
T ss_pred CceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEE
Confidence 578899999999999999999 46789999999965422 23567889999999997 999999999997544 6899
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC--
Q 011519 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-- 208 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~-- 208 (484)
||||++ |+|.+++.. ..+++..+..++.||+.||.|||+. ||+||||||+|||++.++.+||+|||+++....
T Consensus 89 v~e~~~-~~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~-~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 163 (388)
T 3oz6_A 89 VFDYME-TDLHAVIRA---NILEPVHKQYVVYQLIKVIKYLHSG-GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIR 163 (388)
T ss_dssp EEECCS-EEHHHHHHH---TCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEESSSCC
T ss_pred EecccC-cCHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhC-CEEeCCCCHHHeEEcCCCCEEecCCcccccccccc
Confidence 999997 589999953 4699999999999999999999999 999999999999999999999999999976432
Q ss_pred -----------------------CCcccCCCCCCCcccccC-CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcc
Q 011519 209 -----------------------GRSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN 264 (484)
Q Consensus 209 -----------------------~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~ 264 (484)
.....||+.|+|||++.+ ..++.++|||||||++|||++|+.||++..........
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i 243 (388)
T 3oz6_A 164 RVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERI 243 (388)
T ss_dssp CCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred cccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 123578999999999986 56899999999999999999999998754322111110
Q ss_pred ccccc-----------------------------cccccC------------CCChHHHHHHHHHHHHHhccCCCCCCCh
Q 011519 265 IQTLT-----------------------------DSCLEG------------QFSSDEGTELVRLASRCLQYEPRERPNP 303 (484)
Q Consensus 265 ~~~~~-----------------------------~~~~~~------------~~~~~~~~~l~~li~~cl~~dp~~Rps~ 303 (484)
...+. ...... ..+...++++.+|+.+||..||++|||+
T Consensus 244 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~ 323 (388)
T 3oz6_A 244 IGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISA 323 (388)
T ss_dssp HHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCH
T ss_pred HHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCH
Confidence 00000 000000 0011346789999999999999999999
Q ss_pred HHHHHHH
Q 011519 304 RSLVTAL 310 (484)
Q Consensus 304 ~~il~~l 310 (484)
.++++|-
T Consensus 324 ~e~l~Hp 330 (388)
T 3oz6_A 324 NDALKHP 330 (388)
T ss_dssp HHHTTST
T ss_pred HHHhCCH
Confidence 9999983
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-45 Score=355.91 Aligned_cols=257 Identities=19% Similarity=0.297 Sum_probs=210.6
Q ss_pred CcccccccCCCCCCceEEEEEe-----CCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCC--ceE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-----ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD--ERL 129 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~--~~~ 129 (484)
..|++++.||+|+||.||+|.. .+++.||||++........+.+.+|+.++++++||||+++++++...+ ..+
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 120 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 120 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCE
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceE
Confidence 4678899999999999999983 468899999998766556778999999999999999999999987644 789
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC
Q 011519 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 209 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 209 (484)
+||||+++++|.+++... ...+++..++.++.||+.||.|||+. |++||||||+|||++.++.+||+|||++......
T Consensus 121 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~ 198 (326)
T 2w1i_A 121 LIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTK-RYIHRDLATRNILVENENRVKIGDFGLTKVLPQD 198 (326)
T ss_dssp EEECCCTTCBHHHHHHHS-TTSSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEEEETTEEEECCCTTCEECCSS
T ss_pred EEEECCCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhC-CEeccCCCcceEEEcCCCcEEEecCcchhhcccc
Confidence 999999999999999753 34699999999999999999999999 9999999999999999999999999999876543
Q ss_pred C-------cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhh---c--------cccccccc
Q 011519 210 R-------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD---R--------NIQTLTDS 271 (484)
Q Consensus 210 ~-------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~---~--------~~~~~~~~ 271 (484)
. ...++..|+|||++.+..++.++||||||+++|+|+||..|+.......... . .+......
T Consensus 199 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (326)
T 2w1i_A 199 KEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKN 278 (326)
T ss_dssp CSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHT
T ss_pred ccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhc
Confidence 2 2345677999999998889999999999999999999997765332111110 0 00111111
Q ss_pred cccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhc
Q 011519 272 CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 315 (484)
Q Consensus 272 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~ 315 (484)
......+..++..+.+|+.+||+.||++|||+.++++.|+.+..
T Consensus 279 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~ 322 (326)
T 2w1i_A 279 NGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 322 (326)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 11223455667899999999999999999999999999998765
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-45 Score=355.18 Aligned_cols=253 Identities=18% Similarity=0.276 Sum_probs=203.6
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcE----EEEEEecCCC-CccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQFR----IAVKRFNRSA-WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 130 (484)
.+|++++.||+|+||+||+|.. .+++. ||+|.+.... ....+.+.+|+.+++.++||||+++++++.... .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~ 93 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEE
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceE
Confidence 5788899999999999999994 44543 5788776443 234678999999999999999999999998754 889
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-
Q 011519 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 209 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~- 209 (484)
|+||+.+|+|.+++.. ....+++..++.++.||+.||.|||+. ||+||||||+|||++.++.+||+|||+++.....
T Consensus 94 v~~~~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~ 171 (327)
T 3lzb_A 94 ITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171 (327)
T ss_dssp EECCCSSCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEEEETTEEEECCTTC--------
T ss_pred EEEecCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHhhC-CCcCCCCCHHHEEEcCCCCEEEccCcceeEccCcc
Confidence 9999999999999975 345699999999999999999999999 9999999999999999999999999999875432
Q ss_pred -----CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHH
Q 011519 210 -----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283 (484)
Q Consensus 210 -----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (484)
....+|+.|+|||++.+..++.++|||||||++|+|++ |..||.......... ..........+...+.
T Consensus 172 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 246 (327)
T 3lzb_A 172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS-----ILEKGERLPQPPICTI 246 (327)
T ss_dssp --------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHH-----HHHTTCCCCCCTTBCH
T ss_pred ccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH-----HHHcCCCCCCCccCCH
Confidence 23345778999999999899999999999999999999 888876543222211 1111112233455678
Q ss_pred HHHHHHHHHhccCCCCCCChHHHHHHHHhhhcCC
Q 011519 284 ELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (484)
Q Consensus 284 ~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 317 (484)
++.+|+.+||+.||.+|||+.++++.|..+...+
T Consensus 247 ~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 280 (327)
T 3lzb_A 247 DVYMIMRKCWMIDADSRPKFRELIIEFSKMARDP 280 (327)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTSH
T ss_pred HHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhCc
Confidence 8999999999999999999999999999987653
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-45 Score=360.59 Aligned_cols=255 Identities=17% Similarity=0.143 Sum_probs=198.3
Q ss_pred CcccccccCCCCCCceEEEEEeC----CCcEEEEEEecCCCCcc-----------HHHHHHHHHHHhcCCCCceeeeeee
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLE----NQFRIAVKRFNRSAWPD-----------ARQFLEEARAVGQLRNRRLANLLGC 121 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~hpniv~l~~~ 121 (484)
.+|.+++.||+|+||+||+|... ++..||||++....... ...+.+|+..+..++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 57889999999999999999954 57889999987654221 2346788899999999999999999
Q ss_pred eee----CCceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCC--Cc
Q 011519 122 CCE----GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV--NP 195 (484)
Q Consensus 122 ~~~----~~~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~--~~ 195 (484)
+.. ....++||||+ +++|.+++.. .+.+++..++.++.||+.||.|||+. ||+||||||+|||++.++ .+
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~~~ 192 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQ--NGTFKKSTVLQLGIRMLDVLEYIHEN-EYVHGDIKAANLLLGYKNPDQV 192 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBG--GGBCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEESSSTTSE
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CeeCCCcCHHHEEEccCCCCcE
Confidence 987 67899999999 9999999974 33799999999999999999999999 999999999999999777 99
Q ss_pred eeeccCCccccCCC-----------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhh---
Q 011519 196 RLSCFGLMKNSRDG-----------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIR--- 261 (484)
Q Consensus 196 kl~DfG~a~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~--- 261 (484)
||+|||+++..... ....||+.|+|||++.+..++.++|||||||++|||+||+.||.........
T Consensus 193 kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~ 272 (345)
T 2v62_A 193 YLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQT 272 (345)
T ss_dssp EECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHH
T ss_pred EEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHH
Confidence 99999999765321 3456899999999999888999999999999999999999988542111110
Q ss_pred --hccccccccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhc
Q 011519 262 --DRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 315 (484)
Q Consensus 262 --~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~ 315 (484)
......+.............+.++.+|+..||..||++|||+.+|++.|+.+..
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 273 AKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp HHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred HHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 000111110000000011456789999999999999999999999999987643
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-45 Score=347.63 Aligned_cols=248 Identities=15% Similarity=0.182 Sum_probs=200.9
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCC-ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecC
Q 011519 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~ 135 (484)
.|.+.+.||+|+||+||++.. .++..||||++..... ...+.+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus 23 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 102 (285)
T 3is5_A 23 LFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETC 102 (285)
T ss_dssp HEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred heeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEeC
Confidence 678888999999999999994 5689999999875432 34678999999999999999999999999999999999999
Q ss_pred CCCCHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceee---cCCCCceeeccCCccccCCC-
Q 011519 136 PNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF---DDDVNPRLSCFGLMKNSRDG- 209 (484)
Q Consensus 136 ~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill---~~~~~~kl~DfG~a~~~~~~- 209 (484)
++|+|.+++... .+..+++..++.++.||+.||.|||+. |++||||||+|||+ +.++.+||+|||++......
T Consensus 103 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~-~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (285)
T 3is5_A 103 EGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ-HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE 181 (285)
T ss_dssp SCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-----
T ss_pred CCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC-CEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcc
Confidence 999999998532 246799999999999999999999999 99999999999999 45688999999999765432
Q ss_pred --CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHH
Q 011519 210 --RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287 (484)
Q Consensus 210 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (484)
....+|+.|+|||++. +.++.++||||||+++|+|++|..||.................... ......++.+.+
T Consensus 182 ~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 257 (285)
T 3is5_A 182 HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYA---VECRPLTPQAVD 257 (285)
T ss_dssp -----CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC---C--CCCCHHHHH
T ss_pred cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcccc---cccCcCCHHHHH
Confidence 3457899999999986 5688999999999999999999999876543333221111111000 011224578999
Q ss_pred HHHHHhccCCCCCCChHHHHHHH
Q 011519 288 LASRCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 288 li~~cl~~dp~~Rps~~~il~~l 310 (484)
|+.+||+.||.+|||+.+++++-
T Consensus 258 li~~~L~~dP~~Rps~~e~l~hp 280 (285)
T 3is5_A 258 LLKQMLTKDPERRPSAAQVLHHE 280 (285)
T ss_dssp HHHHHTCSCTTTSCCHHHHHTSG
T ss_pred HHHHHccCChhhCcCHHHHhcCH
Confidence 99999999999999999999873
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-45 Score=362.39 Aligned_cols=253 Identities=17% Similarity=0.225 Sum_probs=205.9
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEec
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey 134 (484)
.+|++++.||+|+||+||+|.. .++..||+|++...... ..+.+.+|+.+++.++||||+++++++...+..++||||
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 112 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 112 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence 5688999999999999999995 47899999999765433 256799999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccC--CCCcc
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR--DGRSY 212 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~--~~~~~ 212 (484)
+++|+|.+++.. .+.+++..+..++.|++.||.|||+..||+||||||+|||++.++.+||+|||++.... .....
T Consensus 113 ~~~~~L~~~l~~--~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 190 (360)
T 3eqc_A 113 MDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 190 (360)
T ss_dssp CTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC----
T ss_pred CCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCcccccccccCC
Confidence 999999999973 34699999999999999999999984489999999999999999999999999987542 23456
Q ss_pred cCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcc----------------------------
Q 011519 213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN---------------------------- 264 (484)
Q Consensus 213 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~---------------------------- 264 (484)
.||+.|+|||++.+..++.++|||||||++|+|+||+.||............
T Consensus 191 ~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (360)
T 3eqc_A 191 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMD 270 (360)
T ss_dssp CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC---------------------------
T ss_pred CCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccccC
Confidence 7899999999999988999999999999999999999988653222111000
Q ss_pred ----------ccccccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 265 ----------IQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 265 ----------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
...+.............+.++.+|+.+||+.||.+|||+.++++|-+
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 327 (360)
T 3eqc_A 271 SRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAF 327 (360)
T ss_dssp ---CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHH
T ss_pred CCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChH
Confidence 00000000011112235678999999999999999999999999854
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-45 Score=360.42 Aligned_cols=256 Identities=18% Similarity=0.276 Sum_probs=208.5
Q ss_pred CCCcccccccCCCCCCceEEEEEeC-CC-----cEEEEEEecCCCCc-cHHHHHHHHHHHhcC-CCCceeeeeeeeeeCC
Q 011519 55 GFAMENIVSEHGEKAPNVVYKGKLE-NQ-----FRIAVKRFNRSAWP-DARQFLEEARAVGQL-RNRRLANLLGCCCEGD 126 (484)
Q Consensus 55 ~f~~~~~~~~lG~G~~g~Vy~~~~~-~~-----~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~ 126 (484)
....|.+.+.||+|+||+||+|... ++ ..||||.+...... ..+.+.+|+.+++.+ +||||+++++++.+.+
T Consensus 44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 123 (333)
T 2i1m_A 44 PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGG 123 (333)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCC
Confidence 3467888899999999999999953 23 47999999765433 356799999999999 8999999999999999
Q ss_pred ceEEEEecCCCCCHHhhhccCC------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCC
Q 011519 127 ERLLVAEYMPNDTLAKHLFHWE------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN 194 (484)
Q Consensus 127 ~~~lv~Ey~~~gsL~~~l~~~~------------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~ 194 (484)
..++||||+++|+|.+++.... ...+++..++.++.||+.||.|||+. |++||||||+|||++.++.
T Consensus 124 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dlkp~NIl~~~~~~ 202 (333)
T 2i1m_A 124 PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK-NCIHRDVAARNVLLTNGHV 202 (333)
T ss_dssp SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGCEEEGGGE
T ss_pred ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC-CcccCCcccceEEECCCCe
Confidence 9999999999999999996421 34689999999999999999999999 9999999999999999999
Q ss_pred ceeeccCCccccCCC------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccc
Q 011519 195 PRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQT 267 (484)
Q Consensus 195 ~kl~DfG~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~ 267 (484)
+||+|||++...... ....+|+.|+|||++.+..++.++||||||+++|+|+| |..||.......... .
T Consensus 203 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~----~ 278 (333)
T 2i1m_A 203 AKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFY----K 278 (333)
T ss_dssp EEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHH----H
T ss_pred EEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHH----H
Confidence 999999999865332 23345778999999998889999999999999999999 877775432111111 1
Q ss_pred cccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhc
Q 011519 268 LTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 315 (484)
Q Consensus 268 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~ 315 (484)
..........+...+..+.+|+..||+.||.+|||+.+++++|+.+..
T Consensus 279 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~ 326 (333)
T 2i1m_A 279 LVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQ 326 (333)
T ss_dssp HHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHhcCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHH
Confidence 111111122344456789999999999999999999999999987654
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-45 Score=358.69 Aligned_cols=249 Identities=16% Similarity=0.236 Sum_probs=197.5
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCc--cHHHHHHHHHHHhcCCCCceeeeeeeeeeCC------c
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGD------E 127 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~------~ 127 (484)
..|++++.||+|+||+||+|.. .+|+.||||++...... ..+++.+|+.+|+.++||||+++++++...+ .
T Consensus 25 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~ 104 (367)
T 1cm8_A 25 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTD 104 (367)
T ss_dssp SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCC
T ss_pred ceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCce
Confidence 4688899999999999999995 67999999999654322 2567899999999999999999999997653 4
Q ss_pred eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccC
Q 011519 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 207 (484)
Q Consensus 128 ~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~ 207 (484)
.++||||+ +++|.+++.. ..+++..+..++.||+.||.|||+. ||+||||||+|||++.++.+||+|||+++...
T Consensus 105 ~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~qi~~~L~~LH~~-~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 179 (367)
T 1cm8_A 105 FYLVMPFM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHAA-GIIHRDLKPGNLAVNEDCELKILDFGLARQAD 179 (367)
T ss_dssp CEEEEECC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC-CccccCcCHHHEEEcCCCCEEEEeeecccccc
Confidence 69999999 8899999963 4699999999999999999999999 99999999999999999999999999998765
Q ss_pred CC-CcccCCCCCCCcccccC-CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccc--------------------
Q 011519 208 DG-RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI-------------------- 265 (484)
Q Consensus 208 ~~-~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~-------------------- 265 (484)
.. ....+|+.|+|||++.+ ..++.++|||||||+++||++|+.||.+...........
T Consensus 180 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~ 259 (367)
T 1cm8_A 180 SEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAK 259 (367)
T ss_dssp SSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHH
T ss_pred cccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHH
Confidence 43 45678999999999987 679999999999999999999999987542211100000
Q ss_pred ------cccccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 266 ------QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 266 ------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
........ .......++.+.+|+.+||..||.+|||+.++++|-+
T Consensus 260 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~ 310 (367)
T 1cm8_A 260 NYMKGLPELEKKDF-ASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPY 310 (367)
T ss_dssp HHHHHSCCCCCCCG-GGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGG
T ss_pred HHHHhCCCCCCCCH-HHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChH
Confidence 00000000 1122345688999999999999999999999999843
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-45 Score=356.36 Aligned_cols=254 Identities=17% Similarity=0.257 Sum_probs=202.8
Q ss_pred CCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCcc--HHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEE
Q 011519 55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (484)
Q Consensus 55 ~f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 131 (484)
.+.+|++++.||+|+||+||+|.. .+++.||||++....... .+.+.+|+.+++.++||||+++++++...+..++|
T Consensus 23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 102 (331)
T 4aaa_A 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLV 102 (331)
T ss_dssp CGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEE
Confidence 456889999999999999999995 568999999986554332 45688999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC--
Q 011519 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 209 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~-- 209 (484)
|||+++++|.+++. ....+++..+..++.||+.||.|||+. |++||||||+|||++.++.+||+|||++......
T Consensus 103 ~e~~~~~~l~~~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~-~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 179 (331)
T 4aaa_A 103 FEFVDHTILDDLEL--FPNGLDYQVVQKYLFQIINGIGFCHSH-NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE 179 (331)
T ss_dssp EECCSEEHHHHHHH--STTCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred EecCCcchHHHHHh--hccCCCHHHHHHHHHHHHHHHHHHHHC-CEEccCcChheEEEcCCCcEEEEeCCCceeecCCcc
Confidence 99999999988875 345699999999999999999999999 9999999999999999999999999999765432
Q ss_pred --CcccCCCCCCCcccccCC-CCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcc--------------------cc
Q 011519 210 --RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN--------------------IQ 266 (484)
Q Consensus 210 --~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~--------------------~~ 266 (484)
....+|+.|+|||++.+. .++.++|||||||++|+|++|+.||............ ..
T Consensus 180 ~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (331)
T 4aaa_A 180 VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFA 259 (331)
T ss_dssp ----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGT
T ss_pred ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccc
Confidence 345689999999999875 6899999999999999999999988754321111000 00
Q ss_pred ccccccccCC-----CChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 267 TLTDSCLEGQ-----FSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 267 ~~~~~~~~~~-----~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
....+..... ..+.+++.+.+|+.+||+.||.+|||+.++++|-+
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~ 309 (331)
T 4aaa_A 260 GVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDF 309 (331)
T ss_dssp TCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHH
T ss_pred cccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcCch
Confidence 0000000000 11235688999999999999999999999998843
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-45 Score=358.84 Aligned_cols=252 Identities=19% Similarity=0.135 Sum_probs=200.3
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCC-----CCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRS-----AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 130 (484)
.+|++++.||+|+||+||+|.. .++..||||++... .....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 26 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 105 (345)
T 3hko_A 26 KKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICL 105 (345)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEE
Confidence 3678888899999999999994 67889999998643 22345679999999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccC--------------------------------------CCCCCCHHHHHHHHHHHHHHHHHhh
Q 011519 131 VAEYMPNDTLAKHLFHW--------------------------------------ETQPMKWAMRLRVALHIAEALEYCT 172 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~~--------------------------------------~~~~l~~~~~~~i~~qi~~~L~~lH 172 (484)
||||++||+|.+++... ....+++..++.++.||+.||.|||
T Consensus 106 v~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH 185 (345)
T 3hko_A 106 VMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLH 185 (345)
T ss_dssp EEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998521 0112467788999999999999999
Q ss_pred cCCCcccccccccceeecCCC--CceeeccCCccccCC--------CCcccCCCCCCCcccccC--CCCCCCCceeehHH
Q 011519 173 SKERALYHDLNAYRIVFDDDV--NPRLSCFGLMKNSRD--------GRSYSTNLAFTPPEYLRT--GRVTPESVMYSFGT 240 (484)
Q Consensus 173 ~~~~ivH~Dlkp~Nill~~~~--~~kl~DfG~a~~~~~--------~~~~~~t~~y~aPE~~~~--~~~~~~~Dv~slG~ 240 (484)
+. ||+||||||+|||++.++ .+||+|||++..... .....||+.|+|||++.+ ..++.++|||||||
T Consensus 186 ~~-~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~ 264 (345)
T 3hko_A 186 NQ-GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGV 264 (345)
T ss_dssp HT-TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHH
T ss_pred HC-CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHHH
Confidence 99 999999999999998776 899999999986432 234568999999999975 56899999999999
Q ss_pred HHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 241 LLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 241 ~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
++|+|++|+.||.................. .........++.+.+|+.+||+.||.+|||+.+++++-+
T Consensus 265 il~el~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~ 333 (345)
T 3hko_A 265 LLHLLLMGAVPFPGVNDADTISQVLNKKLC--FENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPW 333 (345)
T ss_dssp HHHHHHHSSCSSCCSSHHHHHHHHHHCCCC--TTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHH
T ss_pred HHHHHHHCCCCCCCCChHHHHHHHHhcccc--cCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhcChh
Confidence 999999999998754332222111111100 001111235688999999999999999999999999843
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-45 Score=354.90 Aligned_cols=253 Identities=21% Similarity=0.325 Sum_probs=208.4
Q ss_pred CcccccccCCCCCCceEEEEEeC------CCcEEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 129 (484)
..|.+.+.||+|+||+||+|... +++.||||++...... ....+.+|+.+++.++||||+++++++.+.+..+
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 104 (322)
T 1p4o_A 25 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL 104 (322)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCE
T ss_pred hheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccE
Confidence 46788889999999999999843 4788999999765432 3456899999999999999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCC--------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccC
Q 011519 130 LVAEYMPNDTLAKHLFHWE--------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 201 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG 201 (484)
+||||+++|+|.+++.... ...+++..++.++.||+.||.|||+. ||+||||||+|||++.++.+||+|||
T Consensus 105 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dikp~NIli~~~~~~kl~Dfg 183 (322)
T 1p4o_A 105 VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFG 183 (322)
T ss_dssp EEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT-TCBCSCCSGGGEEECTTCCEEECCTT
T ss_pred EEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC-CCccCCCccceEEEcCCCeEEECcCc
Confidence 9999999999999996421 14579999999999999999999999 99999999999999999999999999
Q ss_pred CccccCCC------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhcccccccccccc
Q 011519 202 LMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLE 274 (484)
Q Consensus 202 ~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 274 (484)
+++..... ....+|+.|+|||++.+..++.++||||||+++|+|+| |..||............... ..
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-----~~ 258 (322)
T 1p4o_A 184 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG-----GL 258 (322)
T ss_dssp CCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTT-----CC
T ss_pred cccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHcC-----Cc
Confidence 98765332 23345788999999998889999999999999999999 77776543322221111111 01
Q ss_pred CCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhc
Q 011519 275 GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 315 (484)
Q Consensus 275 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~ 315 (484)
...+..++..+.+|+.+||+.||.+|||+.+++++|+.+..
T Consensus 259 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 259 LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 12345567889999999999999999999999999988754
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-45 Score=359.69 Aligned_cols=247 Identities=19% Similarity=0.225 Sum_probs=201.9
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCccHHHHHHHHHHHhcC-CCCceeeeeeeeeeCCceEEEEec
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEY 134 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~Ey 134 (484)
..|++++.||+|+||+||+|.. .+++.||||++..... .+.+|++++.++ +||||+++++++.+.+..++||||
T Consensus 22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~ 97 (342)
T 2qr7_A 22 DGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTEL 97 (342)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECC
T ss_pred ccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeC
Confidence 4688889999999999999995 5789999999976542 235788888887 799999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCC----CCceeeccCCccccCCC-
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD----VNPRLSCFGLMKNSRDG- 209 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~----~~~kl~DfG~a~~~~~~- 209 (484)
++||+|.+++. ..+.+++..+..++.||+.||.|||+. ||+||||||+|||+.++ +.+||+|||+++.....
T Consensus 98 ~~gg~L~~~i~--~~~~~~~~~~~~~~~qi~~al~~lH~~-givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~ 174 (342)
T 2qr7_A 98 MKGGELLDKIL--RQKFFSEREASAVLFTITKTVEYLHAQ-GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN 174 (342)
T ss_dssp CCSCBHHHHHH--TCTTCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTT
T ss_pred CCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHC-CcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCC
Confidence 99999999997 445799999999999999999999999 99999999999998533 34999999999865432
Q ss_pred ---CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchh---hHHhhhccccccccccccCCCChHHHH
Q 011519 210 ---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHA---LDLIRDRNIQTLTDSCLEGQFSSDEGT 283 (484)
Q Consensus 210 ---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (484)
....||+.|+|||++.+..++.++|||||||++|+|++|..||.... ...+........ ...........++
T Consensus 175 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~--~~~~~~~~~~~s~ 252 (342)
T 2qr7_A 175 GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGK--FSLSGGYWNSVSD 252 (342)
T ss_dssp CCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCC--CCCCSTTTTTSCH
T ss_pred CceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCC--cccCccccccCCH
Confidence 34578999999999988778999999999999999999999886421 111111100000 0011123345678
Q ss_pred HHHHHHHHHhccCCCCCCChHHHHHHHHh
Q 011519 284 ELVRLASRCLQYEPRERPNPRSLVTALVT 312 (484)
Q Consensus 284 ~l~~li~~cl~~dp~~Rps~~~il~~l~~ 312 (484)
.+.+|+.+||..||++|||+.++++|-+-
T Consensus 253 ~~~~li~~~L~~dP~~R~t~~~il~hp~~ 281 (342)
T 2qr7_A 253 TAKDLVSKMLHVDPHQRLTAALVLRHPWI 281 (342)
T ss_dssp HHHHHHHHHTCSSTTTSCCHHHHTTSHHH
T ss_pred HHHHHHHHHCCCChhHCcCHHHHhcCCee
Confidence 99999999999999999999999998664
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-44 Score=353.70 Aligned_cols=247 Identities=16% Similarity=0.148 Sum_probs=208.7
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCC---ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEE
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 131 (484)
..+|.+++.||+|+||.||++.. .+++.||+|++..... ...+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 35788889999999999999995 5688999999865432 2356789999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC--
Q 011519 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 209 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~-- 209 (484)
|||+++++|.+++.. ...+++.+++.++.||+.||.|||+. |++||||||+|||++.++.+||+|||++......
T Consensus 120 ~e~~~~~~L~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 196 (335)
T 2owb_A 120 LELCRRRSLLELHKR--RKALTEPEARYYLRQIVLGCQYLHRN-RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 196 (335)
T ss_dssp ECCCTTCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred EecCCCCCHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC-CCEecCCCchhEEEcCCCCEEEeeccCceecccCcc
Confidence 999999999999863 35699999999999999999999999 9999999999999999999999999999875422
Q ss_pred --CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHH
Q 011519 210 --RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287 (484)
Q Consensus 210 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (484)
....||+.|+|||++.+..++.++||||||+++|+|++|..||............... ...++...+..+.+
T Consensus 197 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 270 (335)
T 2owb_A 197 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN------EYSIPKHINPVAAS 270 (335)
T ss_dssp CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHT------CCCCCTTSCHHHHH
T ss_pred cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcC------CCCCCccCCHHHHH
Confidence 3456899999999999888999999999999999999999988754322221111100 11234455678999
Q ss_pred HHHHHhccCCCCCCChHHHHHHHH
Q 011519 288 LASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 288 li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
|+.+||+.||++|||+.+++++-+
T Consensus 271 li~~~l~~dp~~Rps~~ell~~~~ 294 (335)
T 2owb_A 271 LIQKMLQTDPTARPTINELLNDEF 294 (335)
T ss_dssp HHHHHTCSSGGGSCCGGGGGGSHH
T ss_pred HHHHHccCChhHCcCHHHHhcCcc
Confidence 999999999999999999999854
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-44 Score=348.26 Aligned_cols=248 Identities=16% Similarity=0.243 Sum_probs=209.4
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCC-ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecC
Q 011519 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~ 135 (484)
.|.+++.||+|+||+||+|. ..+++.||||++..... ...+.+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 23 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 102 (303)
T 3a7i_A 23 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL 102 (303)
T ss_dssp TEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeC
Confidence 47788899999999999999 45789999999976543 34678999999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----Cc
Q 011519 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RS 211 (484)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~----~~ 211 (484)
++++|.+++. .+.+++..++.++.||+.||.|||+. |++|+||||+||+++.++.+||+|||++...... ..
T Consensus 103 ~~~~L~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 178 (303)
T 3a7i_A 103 GGGSALDLLE---PGPLDETQIATILREILKGLDYLHSE-KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT 178 (303)
T ss_dssp TTEEHHHHHT---TSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCBCC
T ss_pred CCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCChheEEECCCCCEEEeecccceecCccccccCc
Confidence 9999999994 45799999999999999999999999 9999999999999999999999999999775443 34
Q ss_pred ccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHH
Q 011519 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291 (484)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 291 (484)
..||+.|+|||++.+..++.++||||||+++|+|++|..||............. .......+...+..+.+|+.+
T Consensus 179 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~li~~ 253 (303)
T 3a7i_A 179 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIP-----KNNPPTLEGNYSKPLKEFVEA 253 (303)
T ss_dssp CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHH-----HSCCCCCCSSCCHHHHHHHHH
T ss_pred cCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhh-----cCCCCCCccccCHHHHHHHHH
Confidence 568899999999998889999999999999999999998876432221111100 011122344556789999999
Q ss_pred HhccCCCCCCChHHHHHHHHhhh
Q 011519 292 CLQYEPRERPNPRSLVTALVTLQ 314 (484)
Q Consensus 292 cl~~dp~~Rps~~~il~~l~~~~ 314 (484)
||..||.+|||+.+++++.+-..
T Consensus 254 ~l~~dp~~Rps~~~ll~~~~~~~ 276 (303)
T 3a7i_A 254 CLNKEPSFRPTAKELLKHKFILR 276 (303)
T ss_dssp HCCSSGGGSCCHHHHTTCHHHHH
T ss_pred HcCCChhhCcCHHHHhhChhhhc
Confidence 99999999999999999866543
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-45 Score=356.28 Aligned_cols=254 Identities=17% Similarity=0.230 Sum_probs=196.9
Q ss_pred cCCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCcc--HHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEE
Q 011519 54 SGFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (484)
Q Consensus 54 ~~f~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 130 (484)
..+.+|.+++.||+|+||+||+|. ..+++.||||+++...... .+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 110 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHL 110 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEE
Confidence 345688999999999999999999 5578999999997554322 4568899999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeec-----CCCCceeeccCCccc
Q 011519 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD-----DDVNPRLSCFGLMKN 205 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~-----~~~~~kl~DfG~a~~ 205 (484)
||||+++ +|.+++.. ...+++..++.++.||+.||.|||+. ||+||||||+|||++ .++.+||+|||+++.
T Consensus 111 v~e~~~~-~L~~~~~~--~~~~~~~~~~~i~~ql~~~l~~LH~~-~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~ 186 (329)
T 3gbz_A 111 IFEYAEN-DLKKYMDK--NPDVSMRVIKSFLYQLINGVNFCHSR-RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARA 186 (329)
T ss_dssp EEECCSE-EHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEEEC-----CCEEEECCTTHHHH
T ss_pred EEecCCC-CHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CEECCCCCHHHEEEecCCCCccceEEECcCCCccc
Confidence 9999975 99999973 45699999999999999999999999 999999999999994 445599999999976
Q ss_pred cCCC----CcccCCCCCCCcccccCCC-CCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcccccc--ccc-------
Q 011519 206 SRDG----RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL--TDS------- 271 (484)
Q Consensus 206 ~~~~----~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~--~~~------- 271 (484)
.... ....+|+.|+|||++.+.. ++.++|||||||++|+|++|..||................ ...
T Consensus 187 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (329)
T 3gbz_A 187 FGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVT 266 (329)
T ss_dssp HC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGG
T ss_pred cCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhh
Confidence 5432 3456799999999998754 8999999999999999999999887543221111100000 000
Q ss_pred ---cccCC------------CChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 272 ---CLEGQ------------FSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 272 ---~~~~~------------~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
..... .+...++++.+|+.+||+.||.+|||+.++++|-+
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 321 (329)
T 3gbz_A 267 ALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPY 321 (329)
T ss_dssp GSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGG
T ss_pred hhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCcc
Confidence 00000 11124678999999999999999999999998744
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-44 Score=368.01 Aligned_cols=249 Identities=16% Similarity=0.202 Sum_probs=195.0
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCC--CccHHHHHHHHHHHhcCCCCceeeeeeeeeeC------Cc
Q 011519 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEG------DE 127 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~------~~ 127 (484)
.+|++++.||+|+||+||+|. ..+++.||||++.... ....+++.+|+.+|+.++||||+++++++... ..
T Consensus 62 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~ 141 (464)
T 3ttj_A 62 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD 141 (464)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred CCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCe
Confidence 578889999999999999999 4578999999997542 22356789999999999999999999999654 35
Q ss_pred eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccC
Q 011519 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 207 (484)
Q Consensus 128 ~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~ 207 (484)
.+|||||+++ +|.+.+. ..+++..+..++.||+.||.|||+. ||+||||||+|||++.++.+||+|||+++...
T Consensus 142 ~~lv~E~~~~-~l~~~~~----~~l~~~~~~~~~~qil~aL~~lH~~-~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 215 (464)
T 3ttj_A 142 VYLVMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 215 (464)
T ss_dssp EEEEEECCSE-EHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTSCEEECCCCCC----
T ss_pred EEEEEeCCCC-CHHHHHh----hcCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCChHhEEEeCCCCEEEEEEEeeeecC
Confidence 6999999976 5777774 2489999999999999999999999 99999999999999999999999999998765
Q ss_pred CC---CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcccccc----------------
Q 011519 208 DG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL---------------- 268 (484)
Q Consensus 208 ~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~---------------- 268 (484)
.. ....||+.|+|||++.+..++.++|||||||++|||++|+.||.+.............+
T Consensus 216 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~ 295 (464)
T 3ttj_A 216 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 295 (464)
T ss_dssp -CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHH
T ss_pred CCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhh
Confidence 43 45678999999999999999999999999999999999999987642111100000000
Q ss_pred --cccc-------ccCCCC-----------hHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 269 --TDSC-------LEGQFS-----------SDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 269 --~~~~-------~~~~~~-----------~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
.... ....++ ...++++.+|+.+||..||++|||+.++++|-+
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~ 358 (464)
T 3ttj_A 296 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 358 (464)
T ss_dssp HHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTT
T ss_pred hHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChh
Confidence 0000 000001 112678999999999999999999999999844
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-44 Score=345.40 Aligned_cols=249 Identities=18% Similarity=0.166 Sum_probs=203.4
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCC----CccHHHHHHHHHHHhcCCCCceeeeeeeee--eCCce
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA----WPDARQFLEEARAVGQLRNRRLANLLGCCC--EGDER 128 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~hpniv~l~~~~~--~~~~~ 128 (484)
..+|.+++.||+|+||.||+|.. .+++.||||+++... ......+.+|+.+++.++||||+++++++. +.+..
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 46788999999999999999994 578999999997532 123567999999999999999999999984 45678
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC
Q 011519 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 208 (484)
Q Consensus 129 ~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~ 208 (484)
++||||++++ |.+++.......+++..++.++.||+.||.|||+. |++||||||+|||++.++.+||+|||++.....
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~-~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~ 161 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQ-GIVHKDIKPGNLLLTTGGTLKISALGVAEALHP 161 (305)
T ss_dssp EEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCCTTCEECCT
T ss_pred EEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHC-CeeecCCCcccEEEcCCCcEEeeccccccccCc
Confidence 9999999876 88888665667899999999999999999999999 999999999999999999999999999986543
Q ss_pred C------CcccCCCCCCCcccccCCC--CCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChH
Q 011519 209 G------RSYSTNLAFTPPEYLRTGR--VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD 280 (484)
Q Consensus 209 ~------~~~~~t~~y~aPE~~~~~~--~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (484)
. ....||+.|+|||++.+.. .+.++||||||+++|+|++|..||............... ...++..
T Consensus 162 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~------~~~~~~~ 235 (305)
T 2wtk_C 162 FAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKG------SYAIPGD 235 (305)
T ss_dssp TCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHC------CCCCCSS
T ss_pred cccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcC------CCCCCCc
Confidence 2 2456899999999998644 477999999999999999999988754332221111110 1123445
Q ss_pred HHHHHHHHHHHHhccCCCCCCChHHHHHHHHh
Q 011519 281 EGTELVRLASRCLQYEPRERPNPRSLVTALVT 312 (484)
Q Consensus 281 ~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~ 312 (484)
+++.+.+|+.+||..||.+|||+.+++++.+-
T Consensus 236 ~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~ 267 (305)
T 2wtk_C 236 CGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWF 267 (305)
T ss_dssp SCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHH
T ss_pred cCHHHHHHHHHHccCChhhCCCHHHHhcCccc
Confidence 66889999999999999999999999998554
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-45 Score=360.09 Aligned_cols=255 Identities=15% Similarity=0.135 Sum_probs=204.4
Q ss_pred CcccccccCCCCCCceEEEEEeC---------CCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceee----------
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLE---------NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLAN---------- 117 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~---------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~---------- 117 (484)
..|.+++.||+|+||+||+|... +++.||||++... +.+.+|+.++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 57888999999999999999954 3789999999754 36889999999999999988
Q ss_pred -----eeeeeee-CCceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecC
Q 011519 118 -----LLGCCCE-GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191 (484)
Q Consensus 118 -----l~~~~~~-~~~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~ 191 (484)
+++++.. .+..++||||+ +++|.+++.......+++..++.++.||+.||.|||+. ||+||||||+|||++.
T Consensus 117 ~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dikp~NIl~~~ 194 (352)
T 2jii_A 117 LAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHEN-EYVHGNVTAENIFVDP 194 (352)
T ss_dssp CSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT-TCBCSCCCGGGEEEET
T ss_pred cCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCCHHHEEEcC
Confidence 5667665 67889999999 99999999754456799999999999999999999999 9999999999999999
Q ss_pred CC--CceeeccCCccccCCC-----------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchh--
Q 011519 192 DV--NPRLSCFGLMKNSRDG-----------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHA-- 256 (484)
Q Consensus 192 ~~--~~kl~DfG~a~~~~~~-----------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~-- 256 (484)
++ .+||+|||+++..... ....||+.|+|||++.+..++.++|||||||++|+|+||+.||....
T Consensus 195 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~ 274 (352)
T 2jii_A 195 EDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPN 274 (352)
T ss_dssp TEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC
T ss_pred CCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcC
Confidence 88 8999999999764321 23478999999999998899999999999999999999999886542
Q ss_pred hHHhhhcc--cccccccccc-CCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhcCCC
Q 011519 257 LDLIRDRN--IQTLTDSCLE-GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 318 (484)
Q Consensus 257 ~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~ 318 (484)
........ .......... .......+..+.+|+.+||+.||.+|||+.++++.|+.+.....
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~ 339 (352)
T 2jii_A 275 TEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLR 339 (352)
T ss_dssp HHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcC
Confidence 11111000 0000000000 00112346889999999999999999999999999999876654
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-44 Score=349.81 Aligned_cols=254 Identities=22% Similarity=0.312 Sum_probs=199.1
Q ss_pred CcccccccCCCCCCceEEEEEe-C---CCcEEEEEEecCCCCc--cHHHHHHHHHHHhcCCCCceeeeeeeeeeCC----
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-E---NQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGD---- 126 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~---~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~---- 126 (484)
..|.+.+.||+|+||+||+|.. . ++..||||+++..... ..+.+.+|+.++++++||||+++++++.+.+
T Consensus 34 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 113 (313)
T 3brb_A 34 NLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGI 113 (313)
T ss_dssp GGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC------
T ss_pred HHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCC
Confidence 5678888999999999999984 2 3458999999765332 3567999999999999999999999997754
Q ss_pred -ceEEEEecCCCCCHHhhhcc----CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccC
Q 011519 127 -ERLLVAEYMPNDTLAKHLFH----WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 201 (484)
Q Consensus 127 -~~~lv~Ey~~~gsL~~~l~~----~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG 201 (484)
..++||||+++|+|.+++.. .....+++..++.++.||+.||.|||+. |++||||||+|||++.++.+||+|||
T Consensus 114 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~dikp~NIli~~~~~~kl~Dfg 192 (313)
T 3brb_A 114 PKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR-NFLHRDLAARNCMLRDDMTVCVADFG 192 (313)
T ss_dssp -CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT-TCCCCCCSGGGEEECTTSCEEECSCS
T ss_pred cccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCcceEEEcCCCcEEEeecC
Confidence 35999999999999999842 2345799999999999999999999999 99999999999999999999999999
Q ss_pred CccccCCC------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhcccccccccccc
Q 011519 202 LMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLE 274 (484)
Q Consensus 202 ~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 274 (484)
++...... ....+++.|+|||.+.+..++.++||||||+++|+|++ |..||............... ..
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~-----~~ 267 (313)
T 3brb_A 193 LSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHG-----HR 267 (313)
T ss_dssp CC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTT-----CC
T ss_pred cceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcC-----CC
Confidence 98865432 23456788999999998889999999999999999999 77776543222111111111 11
Q ss_pred CCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhcC
Q 011519 275 GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316 (484)
Q Consensus 275 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 316 (484)
...+..+++.+.+|+.+||..||.+|||+.+++++|+.+...
T Consensus 268 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~ 309 (313)
T 3brb_A 268 LKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLES 309 (313)
T ss_dssp CCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 223455668899999999999999999999999999987654
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-45 Score=349.14 Aligned_cols=255 Identities=16% Similarity=0.216 Sum_probs=208.0
Q ss_pred CCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCc--cHHHHHHHHHHHhcCCCCceeeeeeeeee--CCceE
Q 011519 55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCE--GDERL 129 (484)
Q Consensus 55 ~f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~--~~~~~ 129 (484)
...+|++++.||+|+||+||+|.. .+++.||||++...... ..+.+.+|+.++++++||||+++++++.. ....+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 83 (279)
T 2w5a_A 4 RAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLY 83 (279)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEE
T ss_pred chhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEE
Confidence 356788999999999999999995 57899999999765432 35578999999999999999999998854 56789
Q ss_pred EEEecCCCCCHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCC-----cccccccccceeecCCCCceeeccCC
Q 011519 130 LVAEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKER-----ALYHDLNAYRIVFDDDVNPRLSCFGL 202 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~lH~~~~-----ivH~Dlkp~Nill~~~~~~kl~DfG~ 202 (484)
+||||+++|+|.+++... ....+++..++.++.||+.||.|||+. + ++||||||+|||++.++.+||+|||+
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~-~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~ 162 (279)
T 2w5a_A 84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR-SDGGHTVLHRDLKPANVFLDGKQNVKLGDFGL 162 (279)
T ss_dssp EEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH-C------CCCCCSGGGEEECSSSCEEECCCCH
T ss_pred EEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc-cCCCCeeEEeccchhhEEEcCCCCEEEecCch
Confidence 999999999999999642 234599999999999999999999998 8 99999999999999999999999999
Q ss_pred ccccCCCC----cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCC
Q 011519 203 MKNSRDGR----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFS 278 (484)
Q Consensus 203 a~~~~~~~----~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (484)
+....... ...+|+.|+|||++.+..++.++||||||+++|+|+||..||............... .....+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~-----~~~~~~ 237 (279)
T 2w5a_A 163 ARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREG-----KFRRIP 237 (279)
T ss_dssp HHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT-----CCCCCC
T ss_pred heeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhc-----ccccCC
Confidence 88765432 346899999999999888999999999999999999999888654322221111111 111234
Q ss_pred hHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhc
Q 011519 279 SDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 315 (484)
Q Consensus 279 ~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~ 315 (484)
...+..+.+++.+||+.||.+|||+.+++++++....
T Consensus 238 ~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~ 274 (279)
T 2w5a_A 238 YRYSDELNEIITRMLNLKDYHRPSVEEILENPLILEH 274 (279)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGG
T ss_pred cccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhh
Confidence 5567889999999999999999999999998765443
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-45 Score=347.81 Aligned_cols=251 Identities=21% Similarity=0.253 Sum_probs=205.8
Q ss_pred Ccccccc-cCCCCCCceEEEEEe---CCCcEEEEEEecCCCCc--cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEE
Q 011519 57 AMENIVS-EHGEKAPNVVYKGKL---ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (484)
Q Consensus 57 ~~~~~~~-~lG~G~~g~Vy~~~~---~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 130 (484)
..|.+.+ .||+|+||+||+|.. .+++.||||+++..... ..+.+.+|+.+++.++||||+++++++ ..+..++
T Consensus 16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~l 94 (291)
T 1xbb_A 16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWML 94 (291)
T ss_dssp GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEE
T ss_pred hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEE
Confidence 4677777 899999999999963 35788999999765322 256799999999999999999999999 6677899
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCC
Q 011519 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR 210 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 210 (484)
||||+++++|.+++.. .+.+++..++.++.||+.||.|||+. |++||||||+|||++.++.+||+|||++.......
T Consensus 95 v~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~-~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 171 (291)
T 1xbb_A 95 VMEMAELGPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEES-NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 171 (291)
T ss_dssp EEECCTTEEHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEEETTEEEECCCTTCEECCTTC
T ss_pred EEEeCCCCCHHHHHHh--CcCCCHHHHHHHHHHHHHHHHHHHhC-CeEcCCCCcceEEEeCCCcEEEccCCcceeeccCC
Confidence 9999999999999974 45699999999999999999999999 99999999999999999999999999998764432
Q ss_pred -------cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHH
Q 011519 211 -------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG 282 (484)
Q Consensus 211 -------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (484)
...+++.|+|||++.+..++.++||||||+++|+|+| |..||............. .......+..++
T Consensus 172 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 246 (291)
T 1xbb_A 172 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE-----KGERMGCPAGCP 246 (291)
T ss_dssp SEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH-----TTCCCCCCTTCC
T ss_pred CcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH-----cCCCCCCCCCCC
Confidence 2345678999999988889999999999999999999 998876543322211111 111223455667
Q ss_pred HHHHHHHHHHhccCCCCCCChHHHHHHHHhhhcC
Q 011519 283 TELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316 (484)
Q Consensus 283 ~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 316 (484)
+.+.+++.+||+.||.+|||+.++++.|+.+...
T Consensus 247 ~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~ 280 (291)
T 1xbb_A 247 REMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD 280 (291)
T ss_dssp HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999887543
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-45 Score=354.76 Aligned_cols=256 Identities=20% Similarity=0.281 Sum_probs=208.3
Q ss_pred CCcccccccCCCCCCceEEEEEe------CCCcEEEEEEecCCCCc-cHHHHHHHHHHHhcC-CCCceeeeeeeeeeCC-
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQL-RNRRLANLLGCCCEGD- 126 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~- 126 (484)
..+|.+++.||+|+||+||+|.. .+++.||||+++..... ..+.+.+|+.++.++ +||||+++++++...+
T Consensus 26 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~ 105 (316)
T 2xir_A 26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 105 (316)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS
T ss_pred hhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCC
Confidence 45788889999999999999983 35688999999865433 355799999999999 7999999999987754
Q ss_pred ceEEEEecCCCCCHHhhhccCCC--------------CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCC
Q 011519 127 ERLLVAEYMPNDTLAKHLFHWET--------------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 192 (484)
Q Consensus 127 ~~~lv~Ey~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~ 192 (484)
..++||||+++|+|.+++..... ..+++..++.++.||+.||.|||+. |++||||||+|||++.+
T Consensus 106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~i~H~dikp~Nil~~~~ 184 (316)
T 2xir_A 106 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR-KCIHRDLAARNILLSEK 184 (316)
T ss_dssp CCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECGG
T ss_pred ceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC-CcccccCccceEEECCC
Confidence 48999999999999999975332 1289999999999999999999999 99999999999999999
Q ss_pred CCceeeccCCccccCCCC------cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccc
Q 011519 193 VNPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNI 265 (484)
Q Consensus 193 ~~~kl~DfG~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~ 265 (484)
+.+||+|||+++...... ...+|+.|+|||++.+..++.++||||||+++|+|+| |..||.............
T Consensus 185 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~ 264 (316)
T 2xir_A 185 NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 264 (316)
T ss_dssp GCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHH
T ss_pred CCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHHh
Confidence 999999999998654332 3456788999999998889999999999999999998 888875432111110000
Q ss_pred cccccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhcC
Q 011519 266 QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316 (484)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 316 (484)
........+...++.+.+++.+||+.||.+|||+.+++++|+.+...
T Consensus 265 ----~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 311 (316)
T 2xir_A 265 ----KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 311 (316)
T ss_dssp ----HHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ----ccCccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence 01111223445568899999999999999999999999999987643
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-44 Score=346.17 Aligned_cols=247 Identities=18% Similarity=0.241 Sum_probs=200.8
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCC--ccHHHHHHHHHHHhcCCCCceeeeeeeeee----CCceE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCE----GDERL 129 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~----~~~~~ 129 (484)
..|.+.+.||+|+||+||+|.. .++..||+|++..... ...+.+.+|+.+++.++||||+++++++.. ....+
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 105 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV 105 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence 4467778899999999999994 5788999999875432 235678999999999999999999999865 35589
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC--cccccccccceeec-CCCCceeeccCCcccc
Q 011519 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKER--ALYHDLNAYRIVFD-DDVNPRLSCFGLMKNS 206 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~--ivH~Dlkp~Nill~-~~~~~kl~DfG~a~~~ 206 (484)
+||||+++|+|.+++.. ...+++..++.++.||+.||.|||+. + ++||||||+|||++ .++.+||+|||++...
T Consensus 106 lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~ 182 (290)
T 1t4h_A 106 LVTELMTSGTLKTYLKR--FKVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp EEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred EEEEecCCCCHHHHHHH--ccCCCHHHHHHHHHHHHHHHHHHHcC-CCCEEECCCCHHHEEEECCCCCEEEeeCCCcccc
Confidence 99999999999999963 35689999999999999999999998 8 99999999999998 7899999999999765
Q ss_pred CCC--CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHH-hhhccccccccccccCCCChHHHH
Q 011519 207 RDG--RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDL-IRDRNIQTLTDSCLEGQFSSDEGT 283 (484)
Q Consensus 207 ~~~--~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 283 (484)
... ....||+.|+|||++. +.++.++||||||+++|+|++|+.||....... ........... ..++...++
T Consensus 183 ~~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 257 (290)
T 1t4h_A 183 RASFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKP----ASFDKVAIP 257 (290)
T ss_dssp CTTSBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCC----GGGGGCCCH
T ss_pred cccccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCc----cccCCCCCH
Confidence 543 3456899999999887 458999999999999999999999886532111 11111111111 112233457
Q ss_pred HHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 284 ELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 284 ~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
.+.+|+.+||+.||.+|||+.++++|-+
T Consensus 258 ~l~~li~~~l~~dp~~Rps~~ell~h~~ 285 (290)
T 1t4h_A 258 EVKEIIEGCIRQNKDERYSIKDLLNHAF 285 (290)
T ss_dssp HHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred HHHHHHHHHccCChhhCCCHHHHhhCcc
Confidence 8999999999999999999999998743
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-44 Score=352.66 Aligned_cols=256 Identities=20% Similarity=0.298 Sum_probs=207.5
Q ss_pred CCcccccccCCCCCCceEEEEEe------CCCcEEEEEEecCCCC-ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCce
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDER 128 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 128 (484)
...|.+++.||+|+||+||+|.. .++..||||++..... ....++.+|+.++++++||||+++++++...+..
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 35778899999999999999983 3477899999975432 2356799999999999999999999999999999
Q ss_pred EEEEecCCCCCHHhhhccCCC-----CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecC---CCCceeecc
Q 011519 129 LLVAEYMPNDTLAKHLFHWET-----QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD---DVNPRLSCF 200 (484)
Q Consensus 129 ~lv~Ey~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~---~~~~kl~Df 200 (484)
++||||+++|+|.+++..... ..+++..++.++.||+.||.|||+. |++||||||+|||++. +..+||+||
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~-~i~H~dlkp~NIli~~~~~~~~~kl~Df 187 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN-HFIHRDIAARNCLLTCPGPGRVAKIGDF 187 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEESCSSTTCCEEECCC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC-CeecCcCCHhHEEEecCCCcceEEECcc
Confidence 999999999999999975332 3589999999999999999999999 9999999999999984 456999999
Q ss_pred CCccccCC------CCcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccc
Q 011519 201 GLMKNSRD------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCL 273 (484)
Q Consensus 201 G~a~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 273 (484)
|++..... .....+|+.|+|||++.+..++.++||||||+++|+|+| |..||.............. ..
T Consensus 188 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~-----~~ 262 (327)
T 2yfx_A 188 GMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTS-----GG 262 (327)
T ss_dssp HHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHT-----TC
T ss_pred ccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhc-----CC
Confidence 99875322 234567889999999988889999999999999999998 8877765432222111111 11
Q ss_pred cCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhcCC
Q 011519 274 EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (484)
Q Consensus 274 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 317 (484)
....+..++..+.+|+.+||+.||.+|||+.+++++|+.+....
T Consensus 263 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~ 306 (327)
T 2yfx_A 263 RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 306 (327)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred CCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCH
Confidence 12234456788999999999999999999999999999887654
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-44 Score=371.98 Aligned_cols=250 Identities=18% Similarity=0.180 Sum_probs=206.1
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCC--CccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEe
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 133 (484)
..|++++.||+|+||+||+|.. .+++.||||++.... ......+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 101 (486)
T 3mwu_A 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE 101 (486)
T ss_dssp HHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred cceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEE
Confidence 3688999999999999999995 578999999985432 2246679999999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeec---CCCCceeeccCCccccCCC-
Q 011519 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD---DDVNPRLSCFGLMKNSRDG- 209 (484)
Q Consensus 134 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~---~~~~~kl~DfG~a~~~~~~- 209 (484)
|+.+|+|.+++.. .+.+++..+..++.||+.||.|||+. ||+||||||+|||++ .++.+||+|||++......
T Consensus 102 ~~~~~~L~~~~~~--~~~~~~~~~~~i~~qi~~al~~lH~~-~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 178 (486)
T 3mwu_A 102 LYTGGELFDEIIK--RKRFSEHDAARIIKQVFSGITYMHKH-NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT 178 (486)
T ss_dssp CCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC-
T ss_pred cCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCC
Confidence 9999999999863 35699999999999999999999999 999999999999995 4567999999999865443
Q ss_pred --CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHH
Q 011519 210 --RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287 (484)
Q Consensus 210 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (484)
....||+.|+|||++.+ .++.++|||||||++|+|++|..||................... ........++.+.+
T Consensus 179 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~--~~~~~~~~s~~~~~ 255 (486)
T 3mwu_A 179 KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAF--DLPQWRTISDDAKD 255 (486)
T ss_dssp ---CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCS--CSGGGGGSCHHHHH
T ss_pred ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC--CCcccCCCCHHHHH
Confidence 34578999999999975 58999999999999999999999987653322221111110000 00112345788999
Q ss_pred HHHHHhccCCCCCCChHHHHHHHHh
Q 011519 288 LASRCLQYEPRERPNPRSLVTALVT 312 (484)
Q Consensus 288 li~~cl~~dp~~Rps~~~il~~l~~ 312 (484)
||.+||+.||.+|||+.++++|.+-
T Consensus 256 li~~~L~~dp~~R~t~~~~l~hp~~ 280 (486)
T 3mwu_A 256 LIRKMLTFHPSLRITATQCLEHPWI 280 (486)
T ss_dssp HHHHHTCSSTTTSCCHHHHHHCHHH
T ss_pred HHHHHcCCChhhCcCHHHHhcCHhh
Confidence 9999999999999999999998654
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-45 Score=345.58 Aligned_cols=252 Identities=21% Similarity=0.273 Sum_probs=204.7
Q ss_pred CCcccccccCCCCCCceEEEEEeCC----CcEEEEEEecCCCC-ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEE
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKLEN----QFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 130 (484)
..+|.+.+.||+|+||+||+|...+ +..||||++..... ...+.+.+|+.+++.++||||+++++++.+ +..++
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~ 89 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWI 89 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEE
Confidence 3567888899999999999998432 34699999976533 235679999999999999999999999865 45799
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-
Q 011519 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 209 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~- 209 (484)
||||+++++|.+++.. ....+++..++.++.||+.||.|||+. |++||||||+|||++.++.+||+|||++......
T Consensus 90 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 167 (281)
T 3cc6_A 90 IMELYPYGELGHYLER-NKNSLKVLTLVLYSLQICKAMAYLESI-NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDED 167 (281)
T ss_dssp EEECCTTCBHHHHHHH-HTTTCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSGGGEEEEETTEEEECCCCGGGCC----
T ss_pred EEecCCCCCHHHHHHh-ccccCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCccceEEECCCCcEEeCccCCCccccccc
Confidence 9999999999999964 345689999999999999999999999 9999999999999999999999999998865443
Q ss_pred ----CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHH
Q 011519 210 ----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTE 284 (484)
Q Consensus 210 ----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (484)
....+|+.|+|||++.+..++.++||||||+++|+|+| |+.||............ ........+..+++.
T Consensus 168 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 242 (281)
T 3cc6_A 168 YYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVL-----EKGDRLPKPDLCPPV 242 (281)
T ss_dssp -----CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHH-----HHTCCCCCCTTCCHH
T ss_pred ccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHH-----hcCCCCCCCCCCCHH
Confidence 23456788999999998889999999999999999998 99887543221111110 011111234455688
Q ss_pred HHHHHHHHhccCCCCCCChHHHHHHHHhhhc
Q 011519 285 LVRLASRCLQYEPRERPNPRSLVTALVTLQK 315 (484)
Q Consensus 285 l~~li~~cl~~dp~~Rps~~~il~~l~~~~~ 315 (484)
+.+++.+||..||.+|||+.+++++|+.+..
T Consensus 243 l~~li~~~l~~~p~~Rps~~ell~~L~~~~~ 273 (281)
T 3cc6_A 243 LYTLMTRCWDYDPSDRPRFTELVCSLSDVYQ 273 (281)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHccCCchhCcCHHHHHHHHHHHHH
Confidence 9999999999999999999999999988754
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-44 Score=384.28 Aligned_cols=246 Identities=19% Similarity=0.232 Sum_probs=210.1
Q ss_pred CCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCC---CccHHHHHHHHHHHhcC-CCCceeeeeeeeeeCCceE
Q 011519 55 GFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL 129 (484)
Q Consensus 55 ~f~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~ 129 (484)
...+|++++.||+|+||+||+|. ..+++.||||+++... ....+.+..|..++..+ +||||+++++++.+.+.+|
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 35678999999999999999999 4568899999997431 22356788999999988 7999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC-
Q 011519 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD- 208 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~- 208 (484)
|||||++||+|.+++.. .+.+++..+..|+.||+.||.|||+. |||||||||+||||+.++.+||+|||+++....
T Consensus 419 lV~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~-gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 495 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQ--VGRFKEPHAVFYAAEIAIGLFFLQSK-GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD 495 (674)
T ss_dssp EEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-SEECCCCCSTTEEECSSSCEEECCCTTCEECCCT
T ss_pred EEEeCcCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CeEeccCChhhEEEcCCCcEEEeecceeeccccC
Confidence 99999999999999973 35699999999999999999999999 999999999999999999999999999986322
Q ss_pred ---CCcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHH
Q 011519 209 ---GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 285 (484)
Q Consensus 209 ---~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 285 (484)
.....||+.|+|||++.+..++.++|||||||++|||++|..||............... ...++...++++
T Consensus 496 ~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~ 569 (674)
T 3pfq_A 496 GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH------NVAYPKSMSKEA 569 (674)
T ss_dssp TCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSS------CCCCCTTSCHHH
T ss_pred CcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhC------CCCCCccCCHHH
Confidence 24567999999999999999999999999999999999999998765443332222221 123556678899
Q ss_pred HHHHHHHhccCCCCCCCh-----HHHHHH
Q 011519 286 VRLASRCLQYEPRERPNP-----RSLVTA 309 (484)
Q Consensus 286 ~~li~~cl~~dp~~Rps~-----~~il~~ 309 (484)
.+||..||+.||.+||++ ++|++|
T Consensus 570 ~~li~~lL~~dP~~R~~~~~~~~~ei~~h 598 (674)
T 3pfq_A 570 VAICKGLMTKHPGKRLGCGPEGERDIKEH 598 (674)
T ss_dssp HHHHHHHSCSSSTTCTTCSTTHHHHHHSS
T ss_pred HHHHHHHccCCHHHCCCCCCCcHHHHhcC
Confidence 999999999999999998 788877
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-45 Score=355.50 Aligned_cols=254 Identities=17% Similarity=0.243 Sum_probs=198.6
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCcc-HHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEe
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPD-ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 133 (484)
+.+|.+++.||+|+||+||+|.. .+++.||||++....... ...+.+|+.+++.++||||+++++++...+..++|||
T Consensus 1 l~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (324)
T 3mtl_A 1 METYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFE 80 (324)
T ss_dssp CCSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred CCceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEec
Confidence 35788999999999999999995 478999999997543221 2245689999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----
Q 011519 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 209 (484)
Q Consensus 134 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~---- 209 (484)
|++ |+|.+++.. .+..+++..+..++.||+.||.|||+. ||+||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~ 157 (324)
T 3mtl_A 81 YLD-KDLKQYLDD-CGNIINMHNVKLFLFQLLRGLAYCHRQ-KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTY 157 (324)
T ss_dssp CCS-EEHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHT-TEEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred ccc-cCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CccCCCcCHHHEEECCCCCEEEccCcccccccCCcccc
Confidence 997 489999865 345699999999999999999999999 9999999999999999999999999998765432
Q ss_pred CcccCCCCCCCcccccC-CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcccccc-------ccccc--------
Q 011519 210 RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL-------TDSCL-------- 273 (484)
Q Consensus 210 ~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~-------~~~~~-------- 273 (484)
....+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||................ .....
T Consensus 158 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 237 (324)
T 3mtl_A 158 DNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTY 237 (324)
T ss_dssp -----CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHT
T ss_pred ccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhccc
Confidence 33467999999999886 458999999999999999999999987643322111100000 00000
Q ss_pred -----cC----CCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHh
Q 011519 274 -----EG----QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVT 312 (484)
Q Consensus 274 -----~~----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~ 312 (484)
.. ......++++.+|+.+||+.||.+|||+.++++|-+-
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f 285 (324)
T 3mtl_A 238 NYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFF 285 (324)
T ss_dssp CCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGG
T ss_pred ccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhh
Confidence 00 0112346789999999999999999999999998543
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-44 Score=343.02 Aligned_cols=249 Identities=16% Similarity=0.125 Sum_probs=204.6
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCC-ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEec
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey 134 (484)
.+|++++.||+|+||.||+|.. .+++.||||++..... ...+.+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 86 (276)
T 2yex_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86 (276)
T ss_dssp HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEe
Confidence 4678889999999999999995 4789999999865432 3356789999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC------
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD------ 208 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~------ 208 (484)
+++++|.+++. ....+++..++.++.||+.||.|||+. |++|+||||+||+++.++.+||+|||++.....
T Consensus 87 ~~~~~L~~~l~--~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 163 (276)
T 2yex_A 87 CSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGI-GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 163 (276)
T ss_dssp CTTEEGGGGSB--TTTBCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECC
T ss_pred cCCCcHHHHHh--hccCCCHHHHHHHHHHHHHHHHHHHhC-CeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhc
Confidence 99999999996 445799999999999999999999999 999999999999999999999999999876432
Q ss_pred CCcccCCCCCCCcccccCCCC-CCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHH
Q 011519 209 GRSYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287 (484)
Q Consensus 209 ~~~~~~t~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (484)
.....||+.|+|||++.+..+ +.++||||||+++|+|++|..||............ ..............+..+.+
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 240 (276)
T 2yex_A 164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD---WKEKKTYLNPWKKIDSAPLA 240 (276)
T ss_dssp BCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHH---HHTTCTTSTTGGGSCHHHHH
T ss_pred ccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHH---hhhcccccCchhhcCHHHHH
Confidence 234568999999999987665 77999999999999999999988643211000000 00000001112345678999
Q ss_pred HHHHHhccCCCCCCChHHHHHHHH
Q 011519 288 LASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 288 li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
|+.+||+.||.+|||+.+++++.+
T Consensus 241 li~~~l~~~p~~Rps~~~il~~~~ 264 (276)
T 2yex_A 241 LLHKILVENPSARITIPDIKKDRW 264 (276)
T ss_dssp HHHHHSCSSTTTSCCHHHHTTCTT
T ss_pred HHHHHCCCCchhCCCHHHHhcCcc
Confidence 999999999999999999998743
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-44 Score=349.68 Aligned_cols=255 Identities=16% Similarity=0.231 Sum_probs=200.2
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhcC--CCCceeeeeeeeeeC----CceEE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQL--RNRRLANLLGCCCEG----DERLL 130 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~hpniv~l~~~~~~~----~~~~l 130 (484)
.+|++++.||+|+||+||+|+.. ++.||||++... ....+.+|.+++..+ +||||+++++++... ...++
T Consensus 37 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 112 (337)
T 3mdy_A 37 KQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYL 112 (337)
T ss_dssp HHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEE
T ss_pred cceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEE
Confidence 36788899999999999999975 889999998643 334566666666665 899999999999887 67899
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCC-------CcccccccccceeecCCCCceeeccCCc
Q 011519 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE-------RALYHDLNAYRIVFDDDVNPRLSCFGLM 203 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~-------~ivH~Dlkp~Nill~~~~~~kl~DfG~a 203 (484)
||||+++|+|.+++.. ..+++..++.++.|++.||.|||+.. |++||||||+|||++.++.+||+|||++
T Consensus 113 v~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a 189 (337)
T 3mdy_A 113 ITDYHENGSLYDYLKS---TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 189 (337)
T ss_dssp EECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred EEeccCCCcHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCc
Confidence 9999999999999953 46999999999999999999999752 8999999999999999999999999999
Q ss_pred cccCCC--------CcccCCCCCCCcccccCCCCCCC------CceeehHHHHHHHhhC----------CCCCCchhhHH
Q 011519 204 KNSRDG--------RSYSTNLAFTPPEYLRTGRVTPE------SVMYSFGTLLLDLLSG----------KHIPPSHALDL 259 (484)
Q Consensus 204 ~~~~~~--------~~~~~t~~y~aPE~~~~~~~~~~------~Dv~slG~~l~el~tg----------~~p~~~~~~~~ 259 (484)
...... ....||+.|+|||++.+...+.. +|||||||++|||+|| ..|+.......
T Consensus 190 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~ 269 (337)
T 3mdy_A 190 VKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSD 269 (337)
T ss_dssp EECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCC
Confidence 765432 24578999999999987776665 9999999999999999 44443211000
Q ss_pred hhhccc-cccccccccCCCC-----hHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhcCCC
Q 011519 260 IRDRNI-QTLTDSCLEGQFS-----SDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 318 (484)
Q Consensus 260 ~~~~~~-~~~~~~~~~~~~~-----~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~ 318 (484)
...... ...........++ ..++..+.+|+.+||+.||.+|||+.+++++|+.+.+...
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~ 334 (337)
T 3mdy_A 270 PSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQD 334 (337)
T ss_dssp CCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTTT
T ss_pred CchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhcc
Confidence 000000 0000011111222 3678889999999999999999999999999999887653
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-45 Score=349.45 Aligned_cols=248 Identities=18% Similarity=0.217 Sum_probs=200.4
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecC
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~ 135 (484)
..|++++.||+|+||+||+|.. .+++.||+|++........+.+.+|+.++..++||||+++++++...+..++||||+
T Consensus 19 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 98 (302)
T 2j7t_A 19 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFC 98 (302)
T ss_dssp GTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECC
T ss_pred cceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeC
Confidence 4678899999999999999995 468999999998766566788999999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCcccc----CCCCc
Q 011519 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS----RDGRS 211 (484)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~----~~~~~ 211 (484)
++++|.+++.. ....+++..++.++.||+.||.|||+. |++||||||+|||++.++.+||+|||++... .....
T Consensus 99 ~~~~l~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 176 (302)
T 2j7t_A 99 PGGAVDAIMLE-LDRGLTEPQIQVVCRQMLEALNFLHSK-RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS 176 (302)
T ss_dssp TTEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC---
T ss_pred CCCcHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHhcC-CcccCCCCHHHEEECCCCCEEEEECCCCcccccccccccc
Confidence 99999999864 245699999999999999999999999 9999999999999999999999999987542 22345
Q ss_pred ccCCCCCCCccccc-----CCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHH
Q 011519 212 YSTNLAFTPPEYLR-----TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 286 (484)
Q Consensus 212 ~~~t~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 286 (484)
..||+.|+|||++. +..++.++||||||+++|+|++|..|+................. .....+...+..+.
T Consensus 177 ~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~ 253 (302)
T 2j7t_A 177 FIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDP---PTLLTPSKWSVEFR 253 (302)
T ss_dssp --CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC---CCCSSGGGSCHHHH
T ss_pred ccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCC---cccCCccccCHHHH
Confidence 67899999999983 56789999999999999999999988765322211111110000 01112345578899
Q ss_pred HHHHHHhccCCCCCCChHHHHHH
Q 011519 287 RLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 287 ~li~~cl~~dp~~Rps~~~il~~ 309 (484)
+|+.+||+.||.+|||+.++++|
T Consensus 254 ~li~~~l~~dp~~Rps~~~ll~h 276 (302)
T 2j7t_A 254 DFLKIALDKNPETRPSAAQLLEH 276 (302)
T ss_dssp HHHHHHSCSCTTTSCCHHHHTTS
T ss_pred HHHHHHcccChhhCCCHHHHhcC
Confidence 99999999999999999999886
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-44 Score=370.71 Aligned_cols=248 Identities=16% Similarity=0.178 Sum_probs=201.2
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCC--ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEec
Q 011519 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey 134 (484)
.|++++.||+|+||+||+|+. .++..||||++..... .....+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 38 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 117 (494)
T 3lij_A 38 MYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMEC 117 (494)
T ss_dssp HEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEec
Confidence 688899999999999999995 5789999999976432 2356799999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecC---CCCceeeccCCccccCCC--
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD---DVNPRLSCFGLMKNSRDG-- 209 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~---~~~~kl~DfG~a~~~~~~-- 209 (484)
+++|+|.+++.. ...+++..+..++.||+.||.|||+. ||+||||||+|||++. ++.+||+|||++......
T Consensus 118 ~~~g~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~~ 194 (494)
T 3lij_A 118 YKGGELFDEIIH--RMKFNEVDAAVIIKQVLSGVTYLHKH-NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK 194 (494)
T ss_dssp CCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTBC
T ss_pred CCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCcc
Confidence 999999998863 45699999999999999999999999 9999999999999975 455999999999876543
Q ss_pred -CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHH
Q 011519 210 -RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288 (484)
Q Consensus 210 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 288 (484)
....||+.|+|||++. +.++.++|||||||++|+|++|..||................... ........++.+.+|
T Consensus 195 ~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~--~~~~~~~~s~~~~~l 271 (494)
T 3lij_A 195 MKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTF--DSPEWKNVSEGAKDL 271 (494)
T ss_dssp BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCC--CSGGGTTSCHHHHHH
T ss_pred ccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC--CchhcccCCHHHHHH
Confidence 3457899999999986 569999999999999999999999987654332221111111000 000112456789999
Q ss_pred HHHHhccCCCCCCChHHHHHHHH
Q 011519 289 ASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 289 i~~cl~~dp~~Rps~~~il~~l~ 311 (484)
+.+||+.||.+|||+.++++|-+
T Consensus 272 i~~~L~~dp~~R~s~~e~l~hp~ 294 (494)
T 3lij_A 272 IKQMLQFDSQRRISAQQALEHPW 294 (494)
T ss_dssp HHHHTCSSTTTSCCHHHHHTCHH
T ss_pred HHHHCCCChhhCccHHHHhcCcc
Confidence 99999999999999999998844
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-44 Score=351.97 Aligned_cols=252 Identities=15% Similarity=0.121 Sum_probs=205.5
Q ss_pred ccccc-ccCCCCCCceEEEEEe-CCCcEEEEEEecCCCC--ccHHHHHHHHHHHhcCC-CCceeeeeeeeeeCCceEEEE
Q 011519 58 MENIV-SEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVA 132 (484)
Q Consensus 58 ~~~~~-~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~lv~ 132 (484)
.|.+. +.||+|+||+||+|.. .+++.||||++..... .....+.+|+.++..+. ||||+++++++...+..++||
T Consensus 29 ~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~ 108 (327)
T 3lm5_A 29 FYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILIL 108 (327)
T ss_dssp HEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred EEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEE
Confidence 35555 6789999999999995 5689999999975432 23567999999999994 799999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecC---CCCceeeccCCccccCCC
Q 011519 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD---DVNPRLSCFGLMKNSRDG 209 (484)
Q Consensus 133 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~---~~~~kl~DfG~a~~~~~~ 209 (484)
||+++|+|.+++.......+++..++.++.||+.||.|||+. |++||||||+|||++. ++.+||+|||+++.....
T Consensus 109 e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~-givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~ 187 (327)
T 3lm5_A 109 EYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN-NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHA 187 (327)
T ss_dssp ECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC---
T ss_pred EecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC-CeecCcCChHHEEEecCCCCCcEEEeeCccccccCCc
Confidence 999999999999755567899999999999999999999999 9999999999999987 789999999999876543
Q ss_pred ---CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHH
Q 011519 210 ---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 286 (484)
Q Consensus 210 ---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 286 (484)
....||+.|+|||++.+..++.++||||||+++|+|++|+.||................ ..........++..+.
T Consensus 188 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~ 265 (327)
T 3lm5_A 188 CELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVN--VDYSEETFSSVSQLAT 265 (327)
T ss_dssp ------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC--CCCCTTTTTTSCHHHH
T ss_pred cccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcc--cccCchhhcccCHHHH
Confidence 34578999999999998999999999999999999999999987643322211111110 0111122345678899
Q ss_pred HHHHHHhccCCCCCCChHHHHHHHHh
Q 011519 287 RLASRCLQYEPRERPNPRSLVTALVT 312 (484)
Q Consensus 287 ~li~~cl~~dp~~Rps~~~il~~l~~ 312 (484)
+|+.+||+.||.+|||+.++++|-+-
T Consensus 266 ~li~~~L~~dP~~Rpt~~~ll~h~~~ 291 (327)
T 3lm5_A 266 DFIQSLLVKNPEKRPTAEICLSHSWL 291 (327)
T ss_dssp HHHHHHSCSSGGGSCCHHHHTTCGGG
T ss_pred HHHHHHcCCChhhCcCHHHHhCCHhh
Confidence 99999999999999999999998543
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-44 Score=345.11 Aligned_cols=251 Identities=17% Similarity=0.224 Sum_probs=203.4
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecC
Q 011519 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~ 135 (484)
.++.....||+|+||+||+|. ..+++.||||++........+.+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 101 (295)
T 2clq_A 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQV 101 (295)
T ss_dssp CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeC
Confidence 344444567999999999999 4678899999998765555678999999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecC-CCCceeeccCCccccCC----C
Q 011519 136 PNDTLAKHLFHWE-TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-DVNPRLSCFGLMKNSRD----G 209 (484)
Q Consensus 136 ~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~-~~~~kl~DfG~a~~~~~----~ 209 (484)
++++|.+++.... ...+++..+..++.||+.||.|||+. |++|+||||+||+++. ++.+||+|||++..... .
T Consensus 102 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~ 180 (295)
T 2clq_A 102 PGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN-QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCT 180 (295)
T ss_dssp SEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----
T ss_pred CCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC-CEEccCCChhhEEEECCCCCEEEeecccccccCCCCCcc
Confidence 9999999997532 23567999999999999999999999 9999999999999987 89999999999987543 2
Q ss_pred CcccCCCCCCCcccccCCC--CCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHH
Q 011519 210 RSYSTNLAFTPPEYLRTGR--VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287 (484)
Q Consensus 210 ~~~~~t~~y~aPE~~~~~~--~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (484)
....||+.|+|||++.+.. ++.++||||||+++|+|++|+.||............ ..........+...+..+.+
T Consensus 181 ~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 257 (295)
T 2clq_A 181 ETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFK---VGMFKVHPEIPESMSAEAKA 257 (295)
T ss_dssp CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHH---HHHHCCCCCCCTTSCHHHHH
T ss_pred cccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHh---hccccccccccccCCHHHHH
Confidence 3457899999999997654 788999999999999999999887543211110000 00001122345566789999
Q ss_pred HHHHHhccCCCCCCChHHHHHHHH
Q 011519 288 LASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 288 li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
|+.+||+.||++|||+.+++++-+
T Consensus 258 li~~~l~~dp~~Rps~~~ll~~~~ 281 (295)
T 2clq_A 258 FILKCFEPDPDKRACANDLLVDEF 281 (295)
T ss_dssp HHHHTTCSSTTTSCCHHHHHTSGG
T ss_pred HHHHHccCChhhCCCHHHHhcChh
Confidence 999999999999999999998743
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-44 Score=371.62 Aligned_cols=249 Identities=18% Similarity=0.143 Sum_probs=207.8
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCC---ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEe
Q 011519 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 133 (484)
.|++++.||+|+||+||+|+. .+++.||||++..... ...+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 27 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 106 (484)
T 3nyv_A 27 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGE 106 (484)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEe
Confidence 688889999999999999995 5789999999965432 346789999999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceee---cCCCCceeeccCCccccCCCC
Q 011519 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF---DDDVNPRLSCFGLMKNSRDGR 210 (484)
Q Consensus 134 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill---~~~~~~kl~DfG~a~~~~~~~ 210 (484)
|+.+|+|.+++. ..+.+++..++.++.||+.||.|||+. ||+||||||+|||+ +.++.+||+|||++.......
T Consensus 107 ~~~~~~L~~~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 183 (484)
T 3nyv_A 107 VYTGGELFDEII--SRKRFSEVDAARIIRQVLSGITYMHKN-KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK 183 (484)
T ss_dssp CCCSCBHHHHHH--TCSCCBHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCC
T ss_pred cCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccccc
Confidence 999999999997 446799999999999999999999999 99999999999999 567899999999998765443
Q ss_pred ---cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHH
Q 011519 211 ---SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287 (484)
Q Consensus 211 ---~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (484)
...||+.|+|||++.+ .++.++|||||||++|+|++|..||................... .......+++.+.+
T Consensus 184 ~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~--~~~~~~~~s~~~~~ 260 (484)
T 3nyv_A 184 KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTF--ELPQWKKVSESAKD 260 (484)
T ss_dssp SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC--CSGGGGGSCHHHHH
T ss_pred ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCC--CCcccccCCHHHHH
Confidence 4578999999999875 68999999999999999999999987653322221111110000 00112345788999
Q ss_pred HHHHHhccCCCCCCChHHHHHHHHh
Q 011519 288 LASRCLQYEPRERPNPRSLVTALVT 312 (484)
Q Consensus 288 li~~cl~~dp~~Rps~~~il~~l~~ 312 (484)
||.+||+.||.+|||+.++++|-+-
T Consensus 261 li~~~L~~dp~~R~s~~e~l~h~~~ 285 (484)
T 3nyv_A 261 LIRKMLTYVPSMRISARDALDHEWI 285 (484)
T ss_dssp HHHHHTCSSGGGSCCHHHHHTSHHH
T ss_pred HHHHHCCCChhHCcCHHHHhhChhh
Confidence 9999999999999999999998654
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-44 Score=344.80 Aligned_cols=247 Identities=17% Similarity=0.196 Sum_probs=203.0
Q ss_pred cccccccCCCCCCceEEEEEeC-CCcEEEEEEecCCCCc------cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEE
Q 011519 58 MENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWP------DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 130 (484)
.|++++.||+|+||+||+|... +++.||||+++..... ..+.+.+|+.++++++||||+++++++...+..++
T Consensus 6 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 85 (283)
T 3bhy_A 6 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVL 85 (283)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEEE
Confidence 5788899999999999999954 7899999998754322 35779999999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCC----CceeeccCCcccc
Q 011519 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV----NPRLSCFGLMKNS 206 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~----~~kl~DfG~a~~~ 206 (484)
||||+++++|.+++.. ...+++..++.++.||+.||.|||+. |++||||||+||+++.++ .+||+|||++...
T Consensus 86 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~ 162 (283)
T 3bhy_A 86 ILELVSGGELFDFLAE--KESLTEDEATQFLKQILDGVHYLHSK-RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI 162 (283)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEESCSSSSSCCEEECCCTTCEEC
T ss_pred EEeecCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CccCCCCChHHEEEecCCCCCCceEEEecccceec
Confidence 9999999999999963 45699999999999999999999999 999999999999998777 8999999999876
Q ss_pred CCC---CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHH
Q 011519 207 RDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283 (484)
Q Consensus 207 ~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (484)
... ....+|+.|+|||++.+..++.++||||||+++|+|++|..||.................. .........+.
T Consensus 163 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 240 (283)
T 3bhy_A 163 EAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYD--FDEEYFSNTSE 240 (283)
T ss_dssp C--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCC--CCHHHHTTCCH
T ss_pred cCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccC--CcchhcccCCH
Confidence 443 3456889999999999888999999999999999999999988754332221111100000 00001123457
Q ss_pred HHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 284 ELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 284 ~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
.+.+|+.+||..||.+|||+.+++++
T Consensus 241 ~~~~li~~~l~~dp~~Rps~~~~l~h 266 (283)
T 3bhy_A 241 LAKDFIRRLLVKDPKRRMTIAQSLEH 266 (283)
T ss_dssp HHHHHHHTTSCSSGGGSCCHHHHHHC
T ss_pred HHHHHHHHHccCCHhHCcCHHHHHhC
Confidence 89999999999999999999999987
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-44 Score=377.75 Aligned_cols=245 Identities=20% Similarity=0.268 Sum_probs=202.7
Q ss_pred cCCCCCCceEEEEEeC---CCcEEEEEEecCCCC-ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCCCCC
Q 011519 64 EHGEKAPNVVYKGKLE---NQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDT 139 (484)
Q Consensus 64 ~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~~gs 139 (484)
.||+|+||+||+|... ++..||||+++.... ...+.|.+|+.+|++++|||||++++++.. +..+|||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 6899999999999853 467799999986533 346789999999999999999999999876 56999999999999
Q ss_pred HHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCC-------cc
Q 011519 140 LAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR-------SY 212 (484)
Q Consensus 140 L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~-------~~ 212 (484)
|.+++.. ....+++..++.++.||+.||.|||++ +||||||||+|||++.++.+||+|||+++...... ..
T Consensus 422 L~~~l~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~-~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~ 499 (613)
T 2ozo_A 422 LHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEK-NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAG 499 (613)
T ss_dssp HHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC------------
T ss_pred HHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHC-CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccCC
Confidence 9999964 345699999999999999999999999 99999999999999999999999999998754321 22
Q ss_pred cCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHH
Q 011519 213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291 (484)
Q Consensus 213 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 291 (484)
.+++.|+|||++.+..++.++|||||||++|||+| |+.||............ ........+..+++.+.+||..
T Consensus 500 ~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i-----~~~~~~~~p~~~~~~l~~li~~ 574 (613)
T 2ozo_A 500 KWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFI-----EQGKRMECPPECPPELYALMSD 574 (613)
T ss_dssp --CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHH-----HTTCCCCCCTTCCHHHHHHHHH
T ss_pred CCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH-----HcCCCCCCCCcCCHHHHHHHHH
Confidence 34578999999998899999999999999999998 99888654322222111 1111223456677899999999
Q ss_pred HhccCCCCCCChHHHHHHHHhhhcC
Q 011519 292 CLQYEPRERPNPRSLVTALVTLQKD 316 (484)
Q Consensus 292 cl~~dp~~Rps~~~il~~l~~~~~~ 316 (484)
||+.||++|||+.+|++.|+.+...
T Consensus 575 cl~~dP~~RPs~~~l~~~L~~~~~~ 599 (613)
T 2ozo_A 575 CWIYKWEDRPDFLTVEQRMRACYYS 599 (613)
T ss_dssp TTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred HcCCChhHCcCHHHHHHHHHHHHHH
Confidence 9999999999999999999887544
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-44 Score=346.17 Aligned_cols=249 Identities=15% Similarity=0.178 Sum_probs=203.1
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEec
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey 134 (484)
...|++++.||+|+||.||+|.. .+|+.||||++.... ..+.+.+|+.+++.++||||+++++++...+..++||||
T Consensus 28 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 105 (314)
T 3com_A 28 EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEY 105 (314)
T ss_dssp --CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeec
Confidence 35688899999999999999995 468999999997643 456799999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----C
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----R 210 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~----~ 210 (484)
+++++|.+++.. ....+++..++.++.||+.||.|||+. |++|+||||+||+++.++.+||+|||++...... .
T Consensus 106 ~~~~~L~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 183 (314)
T 3com_A 106 CGAGSVSDIIRL-RNKTLTEDEIATILQSTLKGLEYLHFM-RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 183 (314)
T ss_dssp CTTEEHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSCBC
T ss_pred CCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhC-CCcCCCcCHHHEEECCCCCEEEeecccchhhhhhccccC
Confidence 999999999853 345799999999999999999999999 9999999999999999999999999999765432 3
Q ss_pred cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHH
Q 011519 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (484)
Q Consensus 211 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (484)
...||+.|+|||++.+..++.++||||||+++|+|++|..||............... . ......+...+..+.+|+.
T Consensus 184 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~l~~li~ 260 (314)
T 3com_A 184 TVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTN-P--PPTFRKPELWSDNFTDFVK 260 (314)
T ss_dssp CCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS-C--CCCCSSGGGSCHHHHHHHH
T ss_pred ccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcC-C--CcccCCcccCCHHHHHHHH
Confidence 456889999999999888999999999999999999999887643221111000000 0 0011123445688999999
Q ss_pred HHhccCCCCCCChHHHHHHHH
Q 011519 291 RCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~l~ 311 (484)
+||..||.+|||+.+++++-+
T Consensus 261 ~~l~~dp~~Rpt~~~ll~~~~ 281 (314)
T 3com_A 261 QCLVKSPEQRATATQLLQHPF 281 (314)
T ss_dssp HHTCSCTTTSCCHHHHTTSHH
T ss_pred HHccCChhhCcCHHHHHhCHH
Confidence 999999999999999998754
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-44 Score=352.98 Aligned_cols=254 Identities=19% Similarity=0.196 Sum_probs=199.0
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCcc-----HHHHHHHHHHHhcCCCCceeeeeeeeeeCCceE
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPD-----ARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-----~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 129 (484)
...|.+++.||+|+||+||+|.. .+|+.||||++....... .+.+.+|+.+++.++||||+++++++.+.+..+
T Consensus 9 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 88 (346)
T 1ua2_A 9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNIS 88 (346)
T ss_dssp ----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCE
T ss_pred hcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceE
Confidence 45788889999999999999994 568999999997543221 346889999999999999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC
Q 011519 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 209 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 209 (484)
+||||+++ +|.+++.. ....+++..+..++.||+.||.|||+. ||+||||||+|||++.++.+||+|||+++.....
T Consensus 89 lv~e~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~ 165 (346)
T 1ua2_A 89 LVFDFMET-DLEVIIKD-NSLVLTPSHIKAYMLMTLQGLEYLHQH-WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP 165 (346)
T ss_dssp EEEECCSE-EHHHHHTT-CCSSCCSSHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSC
T ss_pred EEEEcCCC-CHHHHHHh-cCcCCCHHHHHHHHHHHHHHHHHHHHC-CEECCCCCHHHEEEcCCCCEEEEecccceeccCC
Confidence 99999976 89998864 345689999999999999999999999 9999999999999999999999999999875432
Q ss_pred ----CcccCCCCCCCcccccCC-CCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccc--------cc------c
Q 011519 210 ----RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQT--------LT------D 270 (484)
Q Consensus 210 ----~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~--------~~------~ 270 (484)
....+|+.|+|||++.+. .++.++|||||||++|+|++|..||............... .. +
T Consensus 166 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 245 (346)
T 1ua2_A 166 NRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPD 245 (346)
T ss_dssp CCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTT
T ss_pred cccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCcc
Confidence 345789999999999764 4789999999999999999999887654322111111000 00 0
Q ss_pred ccccCC---C-----ChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHh
Q 011519 271 SCLEGQ---F-----SSDEGTELVRLASRCLQYEPRERPNPRSLVTALVT 312 (484)
Q Consensus 271 ~~~~~~---~-----~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~ 312 (484)
...... . ....+.++.+|+.+||..||.+|||+.++++|.+-
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~f 295 (346)
T 1ua2_A 246 YVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYF 295 (346)
T ss_dssp CCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGG
T ss_pred cccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChhh
Confidence 000000 0 13346889999999999999999999999998654
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-45 Score=361.74 Aligned_cols=252 Identities=17% Similarity=0.202 Sum_probs=205.1
Q ss_pred CCcccccccCCCCCCceEEEEEe----CCCcEEEEEEecCCCC----ccHHHHHHHHHHHhcC-CCCceeeeeeeeeeCC
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKL----ENQFRIAVKRFNRSAW----PDARQFLEEARAVGQL-RNRRLANLLGCCCEGD 126 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~ 126 (484)
...|++++.||+|+||+||+|+. .+++.||||+++.... ...+.+.+|+.++..+ +||||+++++++...+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 45788999999999999999996 4789999999975321 2245677899999999 6999999999999999
Q ss_pred ceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCcccc
Q 011519 127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 206 (484)
Q Consensus 127 ~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~ 206 (484)
..++||||+++|+|.+++.. ...+++..+..++.||+.||.|||+. ||+||||||+|||++.++.+||+|||+++..
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 209 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQ--RERFTEHEVQIYVGEIVLALEHLHKL-GIIYRDIKLENILLDSNGHVVLTDFGLSKEF 209 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTSCEEESCSSEEEEC
T ss_pred eEEEEeecCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEECCCCcEEEeeCCCCeec
Confidence 99999999999999999973 35699999999999999999999999 9999999999999999999999999998765
Q ss_pred CCC-----CcccCCCCCCCcccccCC--CCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCCh
Q 011519 207 RDG-----RSYSTNLAFTPPEYLRTG--RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSS 279 (484)
Q Consensus 207 ~~~-----~~~~~t~~y~aPE~~~~~--~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (484)
... ....||+.|+|||++.+. .++.++|||||||++|+|+||..||...............+.. ....++.
T Consensus 210 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~ 287 (355)
T 1vzo_A 210 VADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILK--SEPPYPQ 287 (355)
T ss_dssp CGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHH--CCCCCCT
T ss_pred ccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhc--cCCCCCc
Confidence 322 245789999999999863 4788999999999999999999988643211000000000100 1123455
Q ss_pred HHHHHHHHHHHHHhccCCCCCC-----ChHHHHHHHHh
Q 011519 280 DEGTELVRLASRCLQYEPRERP-----NPRSLVTALVT 312 (484)
Q Consensus 280 ~~~~~l~~li~~cl~~dp~~Rp-----s~~~il~~l~~ 312 (484)
..+..+.+||.+||..||.+|| |+.+++++.+-
T Consensus 288 ~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f 325 (355)
T 1vzo_A 288 EMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFF 325 (355)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGG
T ss_pred ccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcch
Confidence 6678899999999999999999 99999998654
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-44 Score=351.72 Aligned_cols=254 Identities=17% Similarity=0.198 Sum_probs=200.7
Q ss_pred CCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCc--cHHHHHHHHHHHhcCCCCceeeeeeeeee-------
Q 011519 55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCE------- 124 (484)
Q Consensus 55 ~f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~------- 124 (484)
...+|++++.||+|+||+||+|+. .+|+.||||++...... ....+.+|+.+++.++||||+++++++..
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 94 (351)
T 3mi9_A 15 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNR 94 (351)
T ss_dssp BGGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC------
T ss_pred cccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeecccccccc
Confidence 356889999999999999999995 67899999998654322 25578899999999999999999999977
Q ss_pred -CCceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCc
Q 011519 125 -GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLM 203 (484)
Q Consensus 125 -~~~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a 203 (484)
.+..++||||+++ +|.+.+.. ....+++..++.++.||+.||.|||+. ||+||||||+|||++.++.+||+|||++
T Consensus 95 ~~~~~~lv~e~~~~-~l~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~-~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 171 (351)
T 3mi9_A 95 CKGSIYLVFDFCEH-DLAGLLSN-VLVKFTLSEIKRVMQMLLNGLYYIHRN-KILHRDMKAANVLITRDGVLKLADFGLA 171 (351)
T ss_dssp --CEEEEEEECCSE-EHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CCceEEEEEeccCC-CHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHC-CeeCCCCCHHHEEEcCCCCEEEccchhc
Confidence 3468999999975 78887754 335699999999999999999999999 9999999999999999999999999999
Q ss_pred cccCC--------CCcccCCCCCCCcccccC-CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcc-------ccc
Q 011519 204 KNSRD--------GRSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN-------IQT 267 (484)
Q Consensus 204 ~~~~~--------~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~-------~~~ 267 (484)
+.... .....||+.|+|||++.+ ..++.++|||||||++|+|+||..||............ ...
T Consensus 172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 251 (351)
T 3mi9_A 172 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 251 (351)
T ss_dssp EECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTT
T ss_pred ccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChh
Confidence 76542 134567899999999876 45899999999999999999999888754322111100 000
Q ss_pred ccccc-----------ccCCCC---h-----HHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 268 LTDSC-----------LEGQFS---S-----DEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 268 ~~~~~-----------~~~~~~---~-----~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
..... ...... . ..++.+.+|+.+||+.||.+|||+.++++|-+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 314 (351)
T 3mi9_A 252 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDF 314 (351)
T ss_dssp TSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred hccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCC
Confidence 00000 000000 0 01467899999999999999999999999854
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-44 Score=371.48 Aligned_cols=250 Identities=15% Similarity=0.142 Sum_probs=203.8
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCC-------------ccHHHHHHHHHHHhcCCCCceeeeeeee
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-------------PDARQFLEEARAVGQLRNRRLANLLGCC 122 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~hpniv~l~~~~ 122 (484)
..|.+++.||+|+||+||+|.. .+++.||||++..... ...+.+.+|+.+|++++||||+++++++
T Consensus 36 ~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~ 115 (504)
T 3q5i_A 36 ESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVF 115 (504)
T ss_dssp GTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred cceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence 4688899999999999999995 5688999999975432 1246789999999999999999999999
Q ss_pred eeCCceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCC---Cceeec
Q 011519 123 CEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV---NPRLSC 199 (484)
Q Consensus 123 ~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~---~~kl~D 199 (484)
.+....++|||||+||+|.+++.. .+.+++..++.++.||+.||.|||+. ||+||||||+|||++.++ .+||+|
T Consensus 116 ~~~~~~~lv~e~~~gg~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~Dlkp~Nil~~~~~~~~~~kl~D 192 (504)
T 3q5i_A 116 EDKKYFYLVTEFYEGGELFEQIIN--RHKFDECDAANIMKQILSGICYLHKH-NIVHRDIKPENILLENKNSLLNIKIVD 192 (504)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEESSTTCCSSEEECC
T ss_pred EcCCEEEEEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeEeCCCcHHHEEEecCCCCccEEEEE
Confidence 999999999999999999999963 45699999999999999999999999 999999999999998775 699999
Q ss_pred cCCccccCCC---CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCC
Q 011519 200 FGLMKNSRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQ 276 (484)
Q Consensus 200 fG~a~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (484)
||++...... ....||+.|+|||++. +.++.++|||||||++|+|++|..||................... ...
T Consensus 193 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~--~~~ 269 (504)
T 3q5i_A 193 FGLSSFFSKDYKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYF--DFN 269 (504)
T ss_dssp CTTCEECCTTSCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC--CHH
T ss_pred CCCCEEcCCCCccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC--Ccc
Confidence 9999876543 3567899999999987 568999999999999999999999987654332221111110000 000
Q ss_pred CChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHh
Q 011519 277 FSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVT 312 (484)
Q Consensus 277 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~ 312 (484)
....+++++.+|+.+||..||.+|||+.++++|-+-
T Consensus 270 ~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~ 305 (504)
T 3q5i_A 270 DWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWI 305 (504)
T ss_dssp HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHH
T ss_pred ccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhh
Confidence 012346789999999999999999999999998654
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-44 Score=364.49 Aligned_cols=251 Identities=16% Similarity=0.173 Sum_probs=196.1
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCC--ccHHHHHHHHHHHhcCCCCceeeeeeeeeeC-----Cce
Q 011519 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEG-----DER 128 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-----~~~ 128 (484)
..|.+++.||+|+||+||+|. ..+++.||||++..... ...+++.+|+.+|+.++||||+++++++... ...
T Consensus 26 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 105 (432)
T 3n9x_A 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDEL 105 (432)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeE
Confidence 478889999999999999999 45688999999976432 2356799999999999999999999999776 568
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC
Q 011519 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 208 (484)
Q Consensus 129 ~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~ 208 (484)
++||||+. |+|.+++. ....+++..+..++.||+.||.|||+. ||+||||||+|||++.++.+||+|||+++....
T Consensus 106 ~lv~e~~~-~~L~~~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~-givHrDlkp~NILl~~~~~~kL~DFGla~~~~~ 181 (432)
T 3n9x_A 106 YIVLEIAD-SDLKKLFK--TPIFLTEEHIKTILYNLLLGENFIHES-GIIHRDLKPANCLLNQDCSVKVCDFGLARTINS 181 (432)
T ss_dssp EEEEECCS-EEHHHHHH--SSCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEEC--
T ss_pred EEEEecCC-cCHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCHHHeEECCCCCEEEccCCCcccccc
Confidence 99999996 59999997 456799999999999999999999999 999999999999999999999999999987543
Q ss_pred C--------------------------CcccCCCCCCCcccc-cCCCCCCCCceeehHHHHHHHhhCCCCC---------
Q 011519 209 G--------------------------RSYSTNLAFTPPEYL-RTGRVTPESVMYSFGTLLLDLLSGKHIP--------- 252 (484)
Q Consensus 209 ~--------------------------~~~~~t~~y~aPE~~-~~~~~~~~~Dv~slG~~l~el~tg~~p~--------- 252 (484)
. ....||+.|+|||++ .+..++.++|||||||++|||++|..|+
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p 261 (432)
T 3n9x_A 182 EKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFP 261 (432)
T ss_dssp -----------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCC
T ss_pred cccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccccccccccc
Confidence 2 456789999999986 4556999999999999999999854433
Q ss_pred --Cchh------------------hHHh---h---------------hccccccccccc-cCC-----CChHHHHHHHHH
Q 011519 253 --PSHA------------------LDLI---R---------------DRNIQTLTDSCL-EGQ-----FSSDEGTELVRL 288 (484)
Q Consensus 253 --~~~~------------------~~~~---~---------------~~~~~~~~~~~~-~~~-----~~~~~~~~l~~l 288 (484)
++.. .+.+ . ............ ... ..+..++++.+|
T Consensus 262 ~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dL 341 (432)
T 3n9x_A 262 LFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINL 341 (432)
T ss_dssp SCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHH
T ss_pred cCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHH
Confidence 2210 0000 0 000000000000 000 012356889999
Q ss_pred HHHHhccCCCCCCChHHHHHHHH
Q 011519 289 ASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 289 i~~cl~~dp~~Rps~~~il~~l~ 311 (484)
+.+||..||.+|||+.++++|-+
T Consensus 342 l~~mL~~dP~~R~ta~e~L~Hp~ 364 (432)
T 3n9x_A 342 LESMLKFNPNKRITIDQALDHPY 364 (432)
T ss_dssp HHHHSCSSTTTSCCHHHHHTCGG
T ss_pred HHHHhcCCcccCCCHHHHhcChh
Confidence 99999999999999999999843
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-45 Score=365.47 Aligned_cols=245 Identities=15% Similarity=0.169 Sum_probs=192.1
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCC--------ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCc
Q 011519 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--------PDARQFLEEARAVGQLRNRRLANLLGCCCEGDE 127 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~ 127 (484)
..|.+++.||+|+||+||+|. ..+++.||||++..... .....+.+|+.+|++++||||+++++++. .+.
T Consensus 135 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~~~ 213 (419)
T 3i6u_A 135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AED 213 (419)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-SSE
T ss_pred ccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCc
Confidence 467888899999999999999 45689999999865321 11224889999999999999999999975 456
Q ss_pred eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCC---CCceeeccCCcc
Q 011519 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD---VNPRLSCFGLMK 204 (484)
Q Consensus 128 ~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~---~~~kl~DfG~a~ 204 (484)
.++||||+++|+|.+++. ..+.+++..+..++.||+.||.|||+. ||+||||||+|||++.+ +.+||+|||+++
T Consensus 214 ~~lv~e~~~~g~L~~~l~--~~~~~~~~~~~~i~~qi~~~l~~LH~~-~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~ 290 (419)
T 3i6u_A 214 YYIVLELMEGGELFDKVV--GNKRLKEATCKLYFYQMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 290 (419)
T ss_dssp EEEEEECCTTCBGGGGTS--SSCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEESSSSSSCCEEECCSSTTT
T ss_pred eEEEEEcCCCCcHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCChHhEEEecCCCcceEEEeecccce
Confidence 899999999999999986 456799999999999999999999999 99999999999999754 459999999998
Q ss_pred ccCCC---CcccCCCCCCCcccccC---CCCCCCCceeehHHHHHHHhhCCCCCCchhhH-----Hhhhccccccccccc
Q 011519 205 NSRDG---RSYSTNLAFTPPEYLRT---GRVTPESVMYSFGTLLLDLLSGKHIPPSHALD-----LIRDRNIQTLTDSCL 273 (484)
Q Consensus 205 ~~~~~---~~~~~t~~y~aPE~~~~---~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~-----~~~~~~~~~~~~~~~ 273 (484)
..... ....||+.|+|||++.+ ..++.++|||||||++|+|+||..||...... .+...... ...
T Consensus 291 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~-~~~--- 366 (419)
T 3i6u_A 291 ILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN-FIP--- 366 (419)
T ss_dssp SCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCC-CCH---
T ss_pred ecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCC-CCc---
Confidence 76543 35678999999999864 56788999999999999999999988643111 11111000 000
Q ss_pred cCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 274 EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 274 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
......++.+.+|+.+||+.||.+|||+.++++|-+
T Consensus 367 --~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~ 402 (419)
T 3i6u_A 367 --EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPW 402 (419)
T ss_dssp --HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGG
T ss_pred --hhhcccCHHHHHHHHHHccCChhHCcCHHHHhCCcc
Confidence 001234678999999999999999999999999843
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-45 Score=362.73 Aligned_cols=259 Identities=14% Similarity=0.138 Sum_probs=209.3
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCC-ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCC--ceEEEE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGD--ERLLVA 132 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~--~~~lv~ 132 (484)
..|.+.+.||+|+||+||+|.. .+++.||||++..... ...+.+.+|+.++++++||||+++++++...+ ..++||
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~ 88 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence 4688889999999999999995 4689999999975432 23567889999999999999999999998765 679999
Q ss_pred ecCCCCCHHhhhccCC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceee----cCCCCceeeccCCccccC
Q 011519 133 EYMPNDTLAKHLFHWE-TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF----DDDVNPRLSCFGLMKNSR 207 (484)
Q Consensus 133 Ey~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill----~~~~~~kl~DfG~a~~~~ 207 (484)
||+++|+|.+++.... ...+++..++.++.||+.||.|||+. ||+||||||+|||+ +.++.+||+|||+++...
T Consensus 89 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~ 167 (396)
T 4eut_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN-GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE 167 (396)
T ss_dssp CCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECC
T ss_pred ecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC-CEEECCcCHHHEEEeecCCCceeEEEecCCCceEcc
Confidence 9999999999996432 23399999999999999999999999 99999999999999 777889999999998765
Q ss_pred CC---CcccCCCCCCCcccccC--------CCCCCCCceeehHHHHHHHhhCCCCCCchhh-----H---Hhhhcccccc
Q 011519 208 DG---RSYSTNLAFTPPEYLRT--------GRVTPESVMYSFGTLLLDLLSGKHIPPSHAL-----D---LIRDRNIQTL 268 (484)
Q Consensus 208 ~~---~~~~~t~~y~aPE~~~~--------~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~-----~---~~~~~~~~~~ 268 (484)
.. ....||+.|+|||++.+ ..++.++|||||||++|||+||+.||..... . ..........
T Consensus 168 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~ 247 (396)
T 4eut_A 168 DDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGA 247 (396)
T ss_dssp CGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTC
T ss_pred CCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCccc
Confidence 43 34568999999999865 4578899999999999999999988753211 0 0111100000
Q ss_pred c---------------cccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhcC
Q 011519 269 T---------------DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316 (484)
Q Consensus 269 ~---------------~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 316 (484)
+ .......++...+..+.+++..||+.||++|||+.++++.++.+...
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 248 ISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp CEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred chhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 0 00011234567889999999999999999999999999999887654
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-44 Score=348.55 Aligned_cols=255 Identities=18% Similarity=0.267 Sum_probs=188.4
Q ss_pred CCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCC-ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEE
Q 011519 55 GFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (484)
Q Consensus 55 ~f~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 132 (484)
+..+|++++.||+|+||+||+|. ..+++.||||++..... ...+.+.+|+.++.+++||||+++++++...+..++||
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (303)
T 2vwi_A 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVM 92 (303)
T ss_dssp CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEE
T ss_pred chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEe
Confidence 34678889999999999999999 45788999999875432 23567889999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhcc------CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCcccc
Q 011519 133 EYMPNDTLAKHLFH------WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 206 (484)
Q Consensus 133 Ey~~~gsL~~~l~~------~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~ 206 (484)
||+++++|.+++.. .....+++..++.++.||+.||.|||+. |++||||||+||+++.++.+||+|||++...
T Consensus 93 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 171 (303)
T 2vwi_A 93 KLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN-GQIHRDVKAGNILLGEDGSVQIADFGVSAFL 171 (303)
T ss_dssp ECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSGGGEEECTTCCEEECCCHHHHHC
T ss_pred hhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC-CCCCCCCChhhEEEcCCCCEEEEeccchhee
Confidence 99999999999863 1345699999999999999999999999 9999999999999999999999999998765
Q ss_pred CCC---------CcccCCCCCCCcccccC-CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhh----hcccccccccc
Q 011519 207 RDG---------RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIR----DRNIQTLTDSC 272 (484)
Q Consensus 207 ~~~---------~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~----~~~~~~~~~~~ 272 (484)
... ....||+.|+|||++.+ ..++.++||||||+++|+|+||+.||......... ...........
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 251 (303)
T 2vwi_A 172 ATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGV 251 (303)
T ss_dssp C---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC--
T ss_pred ccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCcccccc
Confidence 322 23468999999999875 46899999999999999999999988653221111 11111111111
Q ss_pred ccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHH
Q 011519 273 LEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 273 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 310 (484)
.........+..+.+|+.+||+.||.+|||+.+++++-
T Consensus 252 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~ 289 (303)
T 2vwi_A 252 QDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHK 289 (303)
T ss_dssp ---CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTST
T ss_pred ccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhCh
Confidence 11122344567899999999999999999999999873
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-44 Score=357.00 Aligned_cols=250 Identities=18% Similarity=0.229 Sum_probs=185.2
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCC--ccHHHHHHHHHHHhcCCCCceeeeeeeeeeC------Cc
Q 011519 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEG------DE 127 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~------~~ 127 (484)
.+|++++.||+|+||.||+|. ..+|+.||||++..... ...+++.+|+.+++.++||||+++++++... ..
T Consensus 29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~ 108 (367)
T 2fst_X 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND 108 (367)
T ss_dssp TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCe
Confidence 578899999999999999999 56789999999976432 2356788999999999999999999998654 56
Q ss_pred eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccC
Q 011519 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 207 (484)
Q Consensus 128 ~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~ 207 (484)
.++||||+ +++|.+++. ...+++..+..++.||+.||.|||+. ||+||||||+|||++.++.+||+|||+++...
T Consensus 109 ~~lv~e~~-~~~L~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~-givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~ 183 (367)
T 2fst_X 109 VYLVTHLM-GADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDFGLARHTA 183 (367)
T ss_dssp CEEEEECC-CEECC--------CCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTCCEEECC--------
T ss_pred EEEEeccc-CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeCCCCHhhEEECCCCCEEEeecccccccc
Confidence 79999999 789999985 35799999999999999999999999 99999999999999999999999999998755
Q ss_pred CC-CcccCCCCCCCcccccC-CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcccc-------------------
Q 011519 208 DG-RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ------------------- 266 (484)
Q Consensus 208 ~~-~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~------------------- 266 (484)
.. ....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||.+............
T Consensus 184 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~ 263 (367)
T 2fst_X 184 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESAR 263 (367)
T ss_dssp -------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHH
T ss_pred ccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHH
Confidence 43 45678999999999987 5689999999999999999999999875422111100000
Q ss_pred ccccc---cccCC---CChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 267 TLTDS---CLEGQ---FSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 267 ~~~~~---~~~~~---~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
..... ..... .....++.+.+|+.+||..||.+|||+.++++|-+
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~ 314 (367)
T 2fst_X 264 NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 314 (367)
T ss_dssp HHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred HHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcChh
Confidence 00000 00000 01234578999999999999999999999999844
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-44 Score=352.71 Aligned_cols=251 Identities=16% Similarity=0.167 Sum_probs=190.6
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCccHHHHHHHHHHHhcCC-CCceeeeeeeee--------eCC
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCC--------EGD 126 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~--------~~~ 126 (484)
.+|++++.||+|+||+||+|.. .+++.||||++........+.+.+|+.++.++. ||||+++++++. ...
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~ 107 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQA 107 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSE
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCc
Confidence 3678889999999999999994 578999999986655455677999999999996 999999999984 334
Q ss_pred ceEEEEecCCCCCHHhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHhhcCCC--cccccccccceeecCCCCceeeccCCc
Q 011519 127 ERLLVAEYMPNDTLAKHLFH-WETQPMKWAMRLRVALHIAEALEYCTSKER--ALYHDLNAYRIVFDDDVNPRLSCFGLM 203 (484)
Q Consensus 127 ~~~lv~Ey~~~gsL~~~l~~-~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~--ivH~Dlkp~Nill~~~~~~kl~DfG~a 203 (484)
..++||||+. |+|.+++.. ...+.+++..++.++.||+.||.|||+. | ++||||||+|||++.++.+||+|||++
T Consensus 108 ~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~-~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~ 185 (337)
T 3ll6_A 108 EFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185 (337)
T ss_dssp EEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS-SSCCBCCCCCGGGCEECTTSCEEBCCCTTC
T ss_pred eEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC-CCCEEEccCCcccEEECCCCCEEEecCccc
Confidence 5799999995 699998863 2345699999999999999999999998 8 999999999999999999999999999
Q ss_pred cccCCCC----------------cccCCCCCCCcccc---cCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcc
Q 011519 204 KNSRDGR----------------SYSTNLAFTPPEYL---RTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN 264 (484)
Q Consensus 204 ~~~~~~~----------------~~~~t~~y~aPE~~---~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~ 264 (484)
....... ...+|+.|+|||++ .+..++.++||||||+++|+|+||+.||...........
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~- 264 (337)
T 3ll6_A 186 TTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVNG- 264 (337)
T ss_dssp BCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC------------
T ss_pred eeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHhhcC-
Confidence 8754321 34588999999998 456688999999999999999999998864322211111
Q ss_pred ccccccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhcCC
Q 011519 265 IQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (484)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 317 (484)
......+...+..+.+|+.+||+.||.+|||+.+++++|+.+....
T Consensus 265 -------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~ 310 (337)
T 3ll6_A 265 -------KYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAAR 310 (337)
T ss_dssp --------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred -------cccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence 1111122333456899999999999999999999999999887543
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-44 Score=349.76 Aligned_cols=245 Identities=18% Similarity=0.203 Sum_probs=200.5
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCC-CCceeeeeeeeee--CCceEEEE
Q 011519 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCCE--GDERLLVA 132 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~--~~~~~lv~ 132 (484)
.+|++++.||+|+||+||+|. ..+++.||||+++.. ..+.+.+|+.++++++ ||||+++++++.. ....++||
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~ 112 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF 112 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence 578899999999999999999 467899999999743 3567999999999997 9999999999987 56789999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCC-CceeeccCCccccCCC--
Q 011519 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV-NPRLSCFGLMKNSRDG-- 209 (484)
Q Consensus 133 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~-~~kl~DfG~a~~~~~~-- 209 (484)
||+++++|.+++. .+++..+..++.||+.||.|||+. |++||||||+|||++.++ .+||+|||+++.....
T Consensus 113 e~~~~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~ 186 (330)
T 3nsz_A 113 EHVNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHSM-GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE 186 (330)
T ss_dssp ECCCCCCHHHHGG-----GCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCC
T ss_pred eccCchhHHHHHH-----hCCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCc
Confidence 9999999999984 389999999999999999999999 999999999999999776 8999999999865433
Q ss_pred -CcccCCCCCCCcccccC-CCCCCCCceeehHHHHHHHhhCCCCCCchhhHH------------------hhhcc-----
Q 011519 210 -RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDL------------------IRDRN----- 264 (484)
Q Consensus 210 -~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~------------------~~~~~----- 264 (484)
....+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||....... .....
T Consensus 187 ~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (330)
T 3nsz_A 187 YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP 266 (330)
T ss_dssp CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCT
T ss_pred cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhcccccc
Confidence 34568899999999987 568999999999999999999999884321100 00000
Q ss_pred ---------ccccccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHH
Q 011519 265 ---------IQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 265 ---------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 310 (484)
.............+..+++++.+||.+||+.||.+|||+.++++|-
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp 321 (330)
T 3nsz_A 267 RFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHP 321 (330)
T ss_dssp HHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSG
T ss_pred chhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCc
Confidence 0000001111122333678999999999999999999999999984
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-44 Score=363.93 Aligned_cols=253 Identities=18% Similarity=0.204 Sum_probs=203.7
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCccHHHHHHHHHHHhcC------CCCceeeeeeeeeeCCceE
Q 011519 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQL------RNRRLANLLGCCCEGDERL 129 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l------~hpniv~l~~~~~~~~~~~ 129 (484)
.+|++++.||+|+||+||+|. ..+++.||||+++... ...+.+.+|+.++..+ .|+||+++++++...+..+
T Consensus 97 ~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~ 175 (429)
T 3kvw_A 97 YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHIC 175 (429)
T ss_dssp TTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEE
T ss_pred CcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEE
Confidence 358889999999999999998 4568999999997532 2345678888888777 5779999999999999999
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCC--ceeeccCCccccC
Q 011519 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN--PRLSCFGLMKNSR 207 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~--~kl~DfG~a~~~~ 207 (484)
+||||+. ++|.+++.......+++..+..++.||+.||.|||+. |||||||||+|||++.++. +||+|||+++...
T Consensus 176 lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~ 253 (429)
T 3kvw_A 176 MTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN-RIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEH 253 (429)
T ss_dssp EEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHH-TEECSCCSGGGEEESSTTSCCEEECCCTTCEETT
T ss_pred EEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEEccCCCcceEEeecccceecC
Confidence 9999996 5999999866666799999999999999999999999 9999999999999998887 9999999997755
Q ss_pred CC-CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccc-------ccc----------c
Q 011519 208 DG-RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI-------QTL----------T 269 (484)
Q Consensus 208 ~~-~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~-------~~~----------~ 269 (484)
.. ....||+.|+|||++.+..++.++|||||||++|||+||..||............. ..+ .
T Consensus 254 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~ 333 (429)
T 3kvw_A 254 QRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFV 333 (429)
T ss_dssp CCCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHB
T ss_pred CcccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhcc
Confidence 43 45678999999999999899999999999999999999998887542211100000 000 0
Q ss_pred cc---------------------------ccc---------CCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHh
Q 011519 270 DS---------------------------CLE---------GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVT 312 (484)
Q Consensus 270 ~~---------------------------~~~---------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~ 312 (484)
.. ... ..++...++.+.+||.+||+.||++|||+.++++|-+-
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~ 412 (429)
T 3kvw_A 334 SSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWL 412 (429)
T ss_dssp CTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTT
T ss_pred CCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhCChhh
Confidence 00 000 00111225779999999999999999999999998543
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-44 Score=341.34 Aligned_cols=247 Identities=18% Similarity=0.237 Sum_probs=200.7
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCC---CccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEE
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 131 (484)
...|.+.+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|+.+++.++||||+++++++...+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 45788899999999999999995 478999999986432 12356789999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC--
Q 011519 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 209 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~-- 209 (484)
|||+++++|.+++.. .+.+++..++.++.||+.||.|||+. |++|+||||+||+++.++.+||+|||++......
T Consensus 90 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~ 166 (276)
T 2h6d_A 90 MEYVSGGELFDYICK--HGRVEEMEARRLFQQILSAVDYCHRH-MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF 166 (276)
T ss_dssp EECCCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHH-CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC---
T ss_pred EeccCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCChhhEEECCCCCEEEeecccccccCCCcc
Confidence 999999999999963 35689999999999999999999999 9999999999999999999999999999876543
Q ss_pred -CcccCCCCCCCcccccCCCC-CCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHH
Q 011519 210 -RSYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287 (484)
Q Consensus 210 -~~~~~t~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (484)
....+|+.|+|||.+.+..+ +.++||||||+++|+|++|..||............... ....+...+..+.+
T Consensus 167 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~ 240 (276)
T 2h6d_A 167 LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGG------VFYIPEYLNRSVAT 240 (276)
T ss_dssp ----------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHHH
T ss_pred eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcC------cccCchhcCHHHHH
Confidence 34567899999999987665 68999999999999999999988654332222111111 01234455678999
Q ss_pred HHHHHhccCCCCCCChHHHHHHHH
Q 011519 288 LASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 288 li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
++.+||+.||.+|||+.++++|-+
T Consensus 241 li~~~l~~~p~~Rps~~~~l~h~~ 264 (276)
T 2h6d_A 241 LLMHMLQVDPLKRATIKDIREHEW 264 (276)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHSHH
T ss_pred HHHHHccCChhhCCCHHHHHhChh
Confidence 999999999999999999999844
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-45 Score=367.07 Aligned_cols=240 Identities=15% Similarity=0.107 Sum_probs=190.0
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCC---CCccHHHHHHHH---HHHhcCCCCceeeee-------eee
Q 011519 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRS---AWPDARQFLEEA---RAVGQLRNRRLANLL-------GCC 122 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~---~~~~~~~~~~E~---~~l~~l~hpniv~l~-------~~~ 122 (484)
..|.+++.||+|+||+||+|+ ..+|+.||||++... .....+.+.+|+ .+++.++|||||+++ +++
T Consensus 73 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~ 152 (377)
T 3byv_A 73 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 152 (377)
T ss_dssp EEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEE
T ss_pred ceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhh
Confidence 457788999999999999999 467999999999743 223457799999 455556899999998 555
Q ss_pred eeCC-----------------ceEEEEecCCCCCHHhhhccCC-----CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccc
Q 011519 123 CEGD-----------------ERLLVAEYMPNDTLAKHLFHWE-----TQPMKWAMRLRVALHIAEALEYCTSKERALYH 180 (484)
Q Consensus 123 ~~~~-----------------~~~lv~Ey~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~ 180 (484)
...+ ..+|||||+ +|+|.+++.... ...+++..++.|+.||+.||.|||+. ||+||
T Consensus 153 ~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivHr 230 (377)
T 3byv_A 153 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY-GLVHT 230 (377)
T ss_dssp ECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT-TEECS
T ss_pred hccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC-CeecC
Confidence 4443 278999999 679999997421 12234588899999999999999999 99999
Q ss_pred cccccceeecCCCCceeeccCCccccCCC-CcccCCCCCCCcccccCC-----------CCCCCCceeehHHHHHHHhhC
Q 011519 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDG-RSYSTNLAFTPPEYLRTG-----------RVTPESVMYSFGTLLLDLLSG 248 (484)
Q Consensus 181 Dlkp~Nill~~~~~~kl~DfG~a~~~~~~-~~~~~t~~y~aPE~~~~~-----------~~~~~~Dv~slG~~l~el~tg 248 (484)
||||+|||++.++.+||+|||+++..... ....| +.|+|||++.+. .++.++|||||||++|||+||
T Consensus 231 Dikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg 309 (377)
T 3byv_A 231 YLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCA 309 (377)
T ss_dssp CCCGGGEEECTTCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHS
T ss_pred CCCHHHEEEcCCCCEEEEechhheecCCcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHC
Confidence 99999999999999999999999875543 34556 999999999877 799999999999999999999
Q ss_pred CCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 249 KHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 249 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
+.||....... ....+.. ....+++.+.+|+.+||+.||.+|||+.+++++
T Consensus 310 ~~Pf~~~~~~~----~~~~~~~------~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 360 (377)
T 3byv_A 310 DLPITKDAALG----GSEWIFR------SCKNIPQPVRALLEGFLRYPKEDRLLPLQAMET 360 (377)
T ss_dssp SCCC------C----CSGGGGS------SCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTS
T ss_pred CCCCccccccc----chhhhhh------hccCCCHHHHHHHHHHcCCCchhCCCHHHHhhC
Confidence 99886432111 1111111 113445789999999999999999999999986
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-44 Score=342.36 Aligned_cols=252 Identities=15% Similarity=0.159 Sum_probs=204.7
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeee-eeCCceEEEEec
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCC-CEGDERLLVAEY 134 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~-~~~~~~~lv~Ey 134 (484)
.+|++++.||+|+||+||+|+. .+++.||||++.... ..+.+.+|+.++..++|++++..+..+ ...+..++||||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 86 (296)
T 3uzp_A 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL 86 (296)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS--SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred cEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc--chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEe
Confidence 4678889999999999999994 679999999987644 234688999999999988766666555 566778999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceee---cCCCCceeeccCCccccCCC--
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF---DDDVNPRLSCFGLMKNSRDG-- 209 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill---~~~~~~kl~DfG~a~~~~~~-- 209 (484)
+ +++|.+++.. ....+++..++.++.||+.||.|||+. |++||||||+|||+ +.++.+||+|||++......
T Consensus 87 ~-~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~ 163 (296)
T 3uzp_A 87 L-GPSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSK-NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART 163 (296)
T ss_dssp C-CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred c-CCCHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHHhC-CeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccccc
Confidence 9 8999999964 345699999999999999999999999 99999999999999 48899999999999865432
Q ss_pred ---------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhh-------HHhhhccccccccccc
Q 011519 210 ---------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL-------DLIRDRNIQTLTDSCL 273 (484)
Q Consensus 210 ---------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~-------~~~~~~~~~~~~~~~~ 273 (484)
....||+.|+|||++.+..++.++|||||||++|+|+||+.||..... ..+....... ...
T Consensus 164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~-- 240 (296)
T 3uzp_A 164 HQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST-PIE-- 240 (296)
T ss_dssp CCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHS-CHH--
T ss_pred ccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCC-chH--
Confidence 345689999999999998999999999999999999999998864211 0111110000 000
Q ss_pred cCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhcCCC
Q 011519 274 EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 318 (484)
Q Consensus 274 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~ 318 (484)
..+..+++.+.+|+.+||+.||.+|||+.++++.|+.+.....
T Consensus 241 --~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~ 283 (296)
T 3uzp_A 241 --VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp --HHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred --HHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcC
Confidence 0123345789999999999999999999999999998876543
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-44 Score=353.09 Aligned_cols=245 Identities=12% Similarity=0.119 Sum_probs=202.4
Q ss_pred CcccccccCCCCCCceEEEEE------eCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCC---CCceeeeeeeeeeCCc
Q 011519 57 AMENIVSEHGEKAPNVVYKGK------LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR---NRRLANLLGCCCEGDE 127 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---hpniv~l~~~~~~~~~ 127 (484)
..|.+++.||+|+||+||+|+ ..+++.||||+++.. ....+..|+.++..++ |+||+++++++...+.
T Consensus 65 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~ 141 (365)
T 3e7e_A 65 KLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNG 141 (365)
T ss_dssp SEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSC
T ss_pred EEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCC
Confidence 567888899999999999994 456889999999754 3556888888888887 9999999999999999
Q ss_pred eEEEEecCCCCCHHhhhccC---CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecC-----------CC
Q 011519 128 RLLVAEYMPNDTLAKHLFHW---ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-----------DV 193 (484)
Q Consensus 128 ~~lv~Ey~~~gsL~~~l~~~---~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~-----------~~ 193 (484)
.+|||||+++|+|.+++... ....+++..++.|+.||+.||.|||+. |||||||||+|||++. ++
T Consensus 142 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~-~ivHrDiKp~NIll~~~~~~~~~~~~~~~ 220 (365)
T 3e7e_A 142 SVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC-EIIHGDIKPDNFILGNGFLEQDDEDDLSA 220 (365)
T ss_dssp EEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCSGGGEEECGGGTCC------CT
T ss_pred cEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC-CeecCCCCHHHEEecccccCccccccccC
Confidence 99999999999999999632 345699999999999999999999998 9999999999999998 89
Q ss_pred CceeeccCCccccC---C---CCcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccc
Q 011519 194 NPRLSCFGLMKNSR---D---GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQT 267 (484)
Q Consensus 194 ~~kl~DfG~a~~~~---~---~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~ 267 (484)
.+||+|||+++... . .....||+.|+|||++.+..++.++|||||||++|||+||+.||....... ..
T Consensus 221 ~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~---~~--- 294 (365)
T 3e7e_A 221 GLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE---CK--- 294 (365)
T ss_dssp TEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE---EE---
T ss_pred CEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc---ee---
Confidence 99999999996543 1 134578999999999999889999999999999999999998875432110 00
Q ss_pred cccccccCCCChHHHHHHHHHHHHHhccCCCCC-CChHHHHHHHHhhhc
Q 011519 268 LTDSCLEGQFSSDEGTELVRLASRCLQYEPRER-PNPRSLVTALVTLQK 315 (484)
Q Consensus 268 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R-ps~~~il~~l~~~~~ 315 (484)
...... .. ..++.+.+++..||..+|.+| |+++++.+.|+.+..
T Consensus 295 -~~~~~~-~~--~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~ 339 (365)
T 3e7e_A 295 -PEGLFR-RL--PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQ 339 (365)
T ss_dssp -ECSCCT-TC--SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHH
T ss_pred -echhcc-cc--CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHH
Confidence 111111 11 235788999999999999999 678888888877654
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-44 Score=352.81 Aligned_cols=249 Identities=15% Similarity=0.175 Sum_probs=193.9
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCC--ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCC------c
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGD------E 127 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~------~ 127 (484)
..|.+++.||+|+||+||+|.. .+++.||||++..... ...+.+.+|+.+++.++||||+++++++...+ .
T Consensus 25 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 104 (371)
T 2xrw_A 25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD 104 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCE
T ss_pred hheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccc
Confidence 5788999999999999999994 5789999999975432 23567889999999999999999999997654 6
Q ss_pred eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccC
Q 011519 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 207 (484)
Q Consensus 128 ~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~ 207 (484)
.++||||+++ +|.+++. ..+++..+..++.||+.||.|||+. ||+||||||+|||++.++.+||+|||+++...
T Consensus 105 ~~lv~e~~~~-~l~~~~~----~~~~~~~~~~i~~qi~~al~~lH~~-~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~ 178 (371)
T 2xrw_A 105 VYIVMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 178 (371)
T ss_dssp EEEEEECCSE-EHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTSCEEECCCCC-----
T ss_pred eEEEEEcCCC-CHHHHHh----hccCHHHHHHHHHHHHHHHHHHHHC-CeecccCCHHHEEEcCCCCEEEEEeecccccc
Confidence 8999999975 7888885 3489999999999999999999999 99999999999999999999999999998765
Q ss_pred CC---CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcccccc----------------
Q 011519 208 DG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL---------------- 268 (484)
Q Consensus 208 ~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~---------------- 268 (484)
.. ....||+.|+|||++.+..++.++|||||||++|+|++|+.||...............+
T Consensus 179 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 258 (371)
T 2xrw_A 179 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVR 258 (371)
T ss_dssp -----------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHH
T ss_pred cccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHH
Confidence 43 34578999999999999889999999999999999999999987542211111000000
Q ss_pred -----------------ccccccCC---CChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 269 -----------------TDSCLEGQ---FSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 269 -----------------~~~~~~~~---~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
........ .+...+..+.+|+.+||..||.+|||+.++++|-+
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~ 321 (371)
T 2xrw_A 259 TYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 321 (371)
T ss_dssp HHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHH
T ss_pred HHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcc
Confidence 00000000 01223678999999999999999999999999854
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-45 Score=360.64 Aligned_cols=250 Identities=13% Similarity=0.038 Sum_probs=185.2
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCc---cHHHHHHHHHHHhcC--CCCceeeee-------eeeee
Q 011519 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP---DARQFLEEARAVGQL--RNRRLANLL-------GCCCE 124 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l--~hpniv~l~-------~~~~~ 124 (484)
.|.+++.||+|+||+||+|.. .+++.||||++...... ..+.+.+|+.++..+ +||||++++ +++..
T Consensus 63 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~ 142 (371)
T 3q60_A 63 KLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAV 142 (371)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEE
T ss_pred eeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheec
Confidence 477889999999999999995 57899999999875532 245677885444444 699988855 34433
Q ss_pred C-----------------CceEEEEecCCCCCHHhhhccCCCCCCCHHHH------HHHHHHHHHHHHHhhcCCCccccc
Q 011519 125 G-----------------DERLLVAEYMPNDTLAKHLFHWETQPMKWAMR------LRVALHIAEALEYCTSKERALYHD 181 (484)
Q Consensus 125 ~-----------------~~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~------~~i~~qi~~~L~~lH~~~~ivH~D 181 (484)
. ...+|||||++ |+|.+++... +..+++..+ +.++.||+.||.|||+. ||+|||
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~-~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~-~ivHrD 219 (371)
T 3q60_A 143 QSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL-DFVYVFRGDEGILALHILTAQLIRLAANLQSK-GLVHGH 219 (371)
T ss_dssp TTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH-HHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT-TEEETT
T ss_pred CCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh-ccccchhhhhhhhhHHHHHHHHHHHHHHHHHC-CCccCc
Confidence 2 33799999998 7999999742 233455566 78889999999999999 999999
Q ss_pred ccccceeecCCCCceeeccCCccccCCCC-cccCCCCCCCcccccC--CCCCCCCceeehHHHHHHHhhCCCCCCchhhH
Q 011519 182 LNAYRIVFDDDVNPRLSCFGLMKNSRDGR-SYSTNLAFTPPEYLRT--GRVTPESVMYSFGTLLLDLLSGKHIPPSHALD 258 (484)
Q Consensus 182 lkp~Nill~~~~~~kl~DfG~a~~~~~~~-~~~~t~~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~ 258 (484)
|||+|||++.++.+||+|||+++...... ...+|+.|+|||++.+ ..++.++|||||||++|||+||+.||......
T Consensus 220 ikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~ 299 (371)
T 3q60_A 220 FTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPG 299 (371)
T ss_dssp CSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTT
T ss_pred CCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcc
Confidence 99999999999999999999999876654 5667799999999987 66999999999999999999999988754221
Q ss_pred Hhhhccc---cccccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHH
Q 011519 259 LIRDRNI---QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 259 ~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 310 (484)
....... ...............+++.+.+|+.+||+.||++|||+.++++|-
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp 354 (371)
T 3q60_A 300 IKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETP 354 (371)
T ss_dssp CTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSH
T ss_pred cccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCH
Confidence 1110000 000011111112235678999999999999999999999999873
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-44 Score=348.88 Aligned_cols=259 Identities=20% Similarity=0.224 Sum_probs=198.4
Q ss_pred cCCCcccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHH--HhcCCCCceeeeeeeeee-----CC
Q 011519 54 SGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARA--VGQLRNRRLANLLGCCCE-----GD 126 (484)
Q Consensus 54 ~~f~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~--l~~l~hpniv~l~~~~~~-----~~ 126 (484)
-++.+|++++.||+|+||+||+|+. +++.||||++... ....+..|.++ +..++||||+++++.+.. ..
T Consensus 10 ~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 85 (336)
T 3g2f_A 10 LDLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFA---NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRM 85 (336)
T ss_dssp CCTTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCE
T ss_pred cChHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeecc---chhhHHHHHHHHHHHhccCcchhhheecccccccCCCc
Confidence 3567889999999999999999987 6789999999643 23445555555 445899999999986542 23
Q ss_pred ceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCC--------CcccccccccceeecCCCCceee
Q 011519 127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKE--------RALYHDLNAYRIVFDDDVNPRLS 198 (484)
Q Consensus 127 ~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~--------~ivH~Dlkp~Nill~~~~~~kl~ 198 (484)
..++||||+++|+|.+++.. ...++..++.++.||+.||.|||+.. ||+||||||+|||++.++.+||+
T Consensus 86 ~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~ 162 (336)
T 3g2f_A 86 EYLLVMEYYPNGSLXKYLSL---HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVIS 162 (336)
T ss_dssp EEEEEECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEEC
T ss_pred eEEEEEecCCCCcHHHHHhh---cccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEe
Confidence 57899999999999999953 34689999999999999999999852 89999999999999999999999
Q ss_pred ccCCccccCCC------------CcccCCCCCCCcccccC-------CCCCCCCceeehHHHHHHHhhCCCCCCchhh-H
Q 011519 199 CFGLMKNSRDG------------RSYSTNLAFTPPEYLRT-------GRVTPESVMYSFGTLLLDLLSGKHIPPSHAL-D 258 (484)
Q Consensus 199 DfG~a~~~~~~------------~~~~~t~~y~aPE~~~~-------~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~-~ 258 (484)
|||+++..... ....||+.|+|||++.+ ..++.++|||||||++|||+||..||..... .
T Consensus 163 DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~ 242 (336)
T 3g2f_A 163 DFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVP 242 (336)
T ss_dssp CCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCC
T ss_pred eccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchh
Confidence 99999765421 23468999999999986 3467789999999999999999766532210 0
Q ss_pred H-----------------hhhccccccccccccCC--CChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhcCCCC
Q 011519 259 L-----------------IRDRNIQTLTDSCLEGQ--FSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTEV 319 (484)
Q Consensus 259 ~-----------------~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~~~ 319 (484)
. ...........+..... .....++.+.+||.+||+.||++|||+.++++.|+.+......
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~ 322 (336)
T 3g2f_A 243 EYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWER 322 (336)
T ss_dssp CCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC
T ss_pred HHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHh
Confidence 0 00000000000111111 1234678899999999999999999999999999998866543
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-44 Score=349.35 Aligned_cols=248 Identities=16% Similarity=0.216 Sum_probs=202.3
Q ss_pred cccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhc--CCCCceeeeeeeeeeCC----ceEEE
Q 011519 58 MENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQ--LRNRRLANLLGCCCEGD----ERLLV 131 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~hpniv~l~~~~~~~~----~~~lv 131 (484)
.|.+.+.||+|+||+||+|+. +++.||||++... ....+.+|++++.. ++||||+++++++.... ..++|
T Consensus 43 ~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv 118 (342)
T 1b6c_B 43 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 118 (342)
T ss_dssp HCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEE
T ss_pred cEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEE
Confidence 567788889999999999998 5889999999643 35678889999887 78999999999998776 78999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhh--------cCCCcccccccccceeecCCCCceeeccCCc
Q 011519 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCT--------SKERALYHDLNAYRIVFDDDVNPRLSCFGLM 203 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH--------~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a 203 (484)
|||+++|+|.+++.. ..+++..++.++.||+.||.||| +. +++||||||+|||++.++.+||+|||++
T Consensus 119 ~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~-~ivH~Dlkp~NIll~~~~~~kL~Dfg~~ 194 (342)
T 1b6c_B 119 SDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP-AIAHRDLKSKNILVKKNGTCCIADLGLA 194 (342)
T ss_dssp ECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC-EEECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred EeecCCCcHHHHHhc---cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccC-CeeeCCCCHHHEEECCCCCEEEEECCCc
Confidence 999999999999953 46999999999999999999999 77 9999999999999999999999999999
Q ss_pred cccCCC--------CcccCCCCCCCcccccCCC------CCCCCceeehHHHHHHHhhC----------CCCCCchh---
Q 011519 204 KNSRDG--------RSYSTNLAFTPPEYLRTGR------VTPESVMYSFGTLLLDLLSG----------KHIPPSHA--- 256 (484)
Q Consensus 204 ~~~~~~--------~~~~~t~~y~aPE~~~~~~------~~~~~Dv~slG~~l~el~tg----------~~p~~~~~--- 256 (484)
...... ....||+.|+|||++.+.. ++.++|||||||++|||+|| ..||....
T Consensus 195 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~ 274 (342)
T 1b6c_B 195 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 274 (342)
T ss_dssp EEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCc
Confidence 765432 3446899999999998652 34689999999999999999 55654321
Q ss_pred --hHHhhhccccccccccccCCC-----ChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhcCC
Q 011519 257 --LDLIRDRNIQTLTDSCLEGQF-----SSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (484)
Q Consensus 257 --~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 317 (484)
........ ........+ ....+..+.+|+.+||+.||++|||+.+++++|+.+.+..
T Consensus 275 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~ 338 (342)
T 1b6c_B 275 PSVEEMRKVV----CEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 338 (342)
T ss_dssp CCHHHHHHHH----TTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred ccHHHHHHHH----HHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHh
Confidence 11111111 111111122 2356788999999999999999999999999999987654
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-44 Score=341.97 Aligned_cols=255 Identities=15% Similarity=0.150 Sum_probs=201.2
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeee-eeCCceEEEEec
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCC-CEGDERLLVAEY 134 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~-~~~~~~~lv~Ey 134 (484)
..|.+++.||+|+||+||+|.. .+++.||||++..... ...+.+|+.++..++|++++..++.+ ...+..++||||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 86 (296)
T 4hgt_A 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL 86 (296)
T ss_dssp --CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred CceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEc
Confidence 3678888899999999999994 6789999998765432 23588999999999988777666655 667788999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceee---cCCCCceeeccCCccccCCC--
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF---DDDVNPRLSCFGLMKNSRDG-- 209 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill---~~~~~~kl~DfG~a~~~~~~-- 209 (484)
+ +++|.+++.. ....+++..++.++.||+.||.|||+. |++||||||+|||+ +.++.+||+|||+++.....
T Consensus 87 ~-~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~-~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~ 163 (296)
T 4hgt_A 87 L-GPSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSK-NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART 163 (296)
T ss_dssp C-CCBHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred c-CCCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeeeeccCCCCeEEEecCccceeccCccc
Confidence 9 9999999964 345699999999999999999999999 99999999999999 78899999999999865432
Q ss_pred ---------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccC---CC
Q 011519 210 ---------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEG---QF 277 (484)
Q Consensus 210 ---------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~ 277 (484)
....||+.|+|||++.+..++.++|||||||++|+|++|+.||......... .....+....... ..
T Consensus 164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 242 (296)
T 4hgt_A 164 HQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKR-QKYERISEKKMSTPIEVL 242 (296)
T ss_dssp CCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSS-SHHHHHHHHHHHSCHHHH
T ss_pred CccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhh-hhhhhhhcccccchhhhh
Confidence 2456899999999999989999999999999999999999988642110000 0000000000000 01
Q ss_pred ChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhcCC
Q 011519 278 SSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (484)
Q Consensus 278 ~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 317 (484)
....++.+.+|+..||+.||++|||+.++++.|+.+....
T Consensus 243 ~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~ 282 (296)
T 4hgt_A 243 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 282 (296)
T ss_dssp TTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHH
T ss_pred hccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHh
Confidence 1234578999999999999999999999999999887654
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-44 Score=346.08 Aligned_cols=250 Identities=14% Similarity=0.190 Sum_probs=200.2
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCccHHHHHHHHHHHhcC-CCCceeeeeeeeee------CCc
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCE------GDE 127 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~------~~~ 127 (484)
...|++++.||+|+||.||+|+. .+++.||||++.... ...+.+.+|+.+++++ +||||+++++++.. .+.
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~ 101 (326)
T 2x7f_A 23 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQ 101 (326)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccce
Confidence 45678889999999999999995 578999999997543 3456789999999999 79999999999977 467
Q ss_pred eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccC
Q 011519 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 207 (484)
Q Consensus 128 ~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~ 207 (484)
.++||||+++|+|.+++.......+++..++.++.||+.||.|||+. |++|+||||+|||++.++.+||+|||++....
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 180 (326)
T 2x7f_A 102 LWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH-KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD 180 (326)
T ss_dssp EEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSGGGEEECTTCCEEECCCTTTC---
T ss_pred EEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCcHHHEEEcCCCCEEEeeCcCceecC
Confidence 89999999999999999765556799999999999999999999999 99999999999999999999999999987654
Q ss_pred CC----CcccCCCCCCCccccc-----CCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCC
Q 011519 208 DG----RSYSTNLAFTPPEYLR-----TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFS 278 (484)
Q Consensus 208 ~~----~~~~~t~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (484)
.. ....||+.|+|||++. +..++.++|||||||++|+|+||..||............ .........+
T Consensus 181 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~----~~~~~~~~~~ 256 (326)
T 2x7f_A 181 RTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI----PRNPAPRLKS 256 (326)
T ss_dssp ----------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH----HHSCCCCCSC
T ss_pred cCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHh----hcCccccCCc
Confidence 32 3456899999999987 456899999999999999999999887643221111110 0011111123
Q ss_pred hHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 279 SDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 279 ~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
...+..+.+|+.+||..||.+|||+.++++|-+
T Consensus 257 ~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~ 289 (326)
T 2x7f_A 257 KKWSKKFQSFIESCLVKNHSQRPATEQLMKHPF 289 (326)
T ss_dssp SCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSHH
T ss_pred cccCHHHHHHHHHHhccChhhCCCHHHHhhChH
Confidence 345678999999999999999999999998744
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-44 Score=352.62 Aligned_cols=250 Identities=19% Similarity=0.192 Sum_probs=203.0
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCc--------cHHHHHHHHHHHhcC-CCCceeeeeeeeeeCC
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--------DARQFLEEARAVGQL-RNRRLANLLGCCCEGD 126 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~ 126 (484)
..|++.+.||.|+||.||+|+. .+|+.||||++...... ..+.+.+|+.++.++ +||||+++++++...+
T Consensus 94 ~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 173 (365)
T 2y7j_A 94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSS 173 (365)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSS
T ss_pred hhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCC
Confidence 4577888899999999999996 47999999998754321 134678999999999 7999999999999999
Q ss_pred ceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCcccc
Q 011519 127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 206 (484)
Q Consensus 127 ~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~ 206 (484)
..++||||++|++|.+++.. ...+++..+..++.||+.||.|||+. |++|+||||+|||++.++.+||+|||++...
T Consensus 174 ~~~lv~e~~~g~~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~~LH~~-gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~ 250 (365)
T 2y7j_A 174 FMFLVFDLMRKGELFDYLTE--KVALSEKETRSIMRSLLEAVSFLHAN-NIVHRDLKPENILLDDNMQIRLSDFGFSCHL 250 (365)
T ss_dssp EEEEEECCCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEEEeCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEECCCCCEEEEecCccccc
Confidence 99999999999999999963 45699999999999999999999999 9999999999999999999999999998876
Q ss_pred CCC---CcccCCCCCCCcccccC------CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCC
Q 011519 207 RDG---RSYSTNLAFTPPEYLRT------GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQF 277 (484)
Q Consensus 207 ~~~---~~~~~t~~y~aPE~~~~------~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (484)
... ....||+.|+|||++.+ ..++.++|||||||++|+|+||..||..................... ..
T Consensus 251 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~--~~ 328 (365)
T 2y7j_A 251 EPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSS--PE 328 (365)
T ss_dssp CTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCH--HH
T ss_pred CCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCC--cc
Confidence 543 34678999999999863 35889999999999999999999988654322111111100000000 00
Q ss_pred ChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 278 SSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 278 ~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
....+..+.+|+.+||+.||++|||+.++++|-+
T Consensus 329 ~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~ 362 (365)
T 2y7j_A 329 WDDRSSTVKDLISRLLQVDPEARLTAEQALQHPF 362 (365)
T ss_dssp HSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGG
T ss_pred cccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcc
Confidence 0123567999999999999999999999998743
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-43 Score=361.34 Aligned_cols=249 Identities=17% Similarity=0.190 Sum_probs=203.6
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCC-CceeeeeeeeeeCCceEEEEec
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRN-RRLANLLGCCCEGDERLLVAEY 134 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-pniv~l~~~~~~~~~~~lv~Ey 134 (484)
..|++++.||+|+||.||+|.. .+++.||||++..... ..++.+|+.++..++| ++|+.+..++...+..+|||||
T Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~ 84 (483)
T 3sv0_A 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDL 84 (483)
T ss_dssp TTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred CcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEEC
Confidence 4678899999999999999994 6789999999875442 3358899999999976 5666677777788889999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceee---cCCCCceeeccCCccccCCCC-
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF---DDDVNPRLSCFGLMKNSRDGR- 210 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill---~~~~~~kl~DfG~a~~~~~~~- 210 (484)
+ +++|.+++.. ....+++..++.|+.||+.||.|||+. |||||||||+|||| +.++.+||+|||+++......
T Consensus 85 ~-g~sL~~ll~~-~~~~l~~~~~~~i~~qi~~aL~yLH~~-gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (483)
T 3sv0_A 85 L-GPSLEDLFNF-CSRKLSLKTVLMLADQMINRVEFVHSK-SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTST 161 (483)
T ss_dssp C-CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred C-CCCHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHHC-CEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCcc
Confidence 9 9999999964 345799999999999999999999999 99999999999999 588999999999998654322
Q ss_pred ----------cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhh-------HHhhhccccccccccc
Q 011519 211 ----------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL-------DLIRDRNIQTLTDSCL 273 (484)
Q Consensus 211 ----------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~-------~~~~~~~~~~~~~~~~ 273 (484)
...||+.|+|||++.+..++.++|||||||++|||++|+.||..... ..+...........
T Consensus 162 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~-- 239 (483)
T 3sv0_A 162 HQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEA-- 239 (483)
T ss_dssp CCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHH--
T ss_pred ccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHHH--
Confidence 56789999999999999999999999999999999999999865211 11111111111110
Q ss_pred cCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhc
Q 011519 274 EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 315 (484)
Q Consensus 274 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~ 315 (484)
....++.++.+|+..||+.||++||++.+|++.|+.+..
T Consensus 240 ---l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~ 278 (483)
T 3sv0_A 240 ---LCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFI 278 (483)
T ss_dssp ---HHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred ---HhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 112335789999999999999999999999999988744
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-44 Score=344.66 Aligned_cols=254 Identities=21% Similarity=0.275 Sum_probs=198.5
Q ss_pred CCcccccccCCCCCCceEEEEEeC--CCc--EEEEEEecCCCC---ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCce
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKLE--NQF--RIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDER 128 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~~--~~~--~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 128 (484)
..+|++++.||+|+||+||+|.+. +++ .||||+++.... ...+.+.+|+.++++++||||+++++++.... .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 357889999999999999999842 333 689999875432 23567999999999999999999999998754 8
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC
Q 011519 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 208 (484)
Q Consensus 129 ~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~ 208 (484)
++||||+++|+|.+++... ...+++..++.++.||+.||.|||+. |++|+||||+|||++.++.+||+|||++.....
T Consensus 96 ~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~-~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 173 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKH-QGHFLLGTLSRYAVQVAEGMGYLESK-RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 173 (291)
T ss_dssp EEEEECCTTCBHHHHHHHH-GGGSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred eeeEecccCCCHHHHHHhc-cCCcCHHHHHHHHHHHHHHHHHHHhC-CcccCCCchheEEEcCCCCEEEccccccccccc
Confidence 9999999999999999642 35689999999999999999999999 999999999999999999999999999887644
Q ss_pred CC-------cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChH
Q 011519 209 GR-------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD 280 (484)
Q Consensus 209 ~~-------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (484)
.. ...+|+.|+|||++.+..++.++||||||+++|+|++ |..||.............. .......+..
T Consensus 174 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~----~~~~~~~~~~ 249 (291)
T 1u46_A 174 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK----EGERLPRPED 249 (291)
T ss_dssp -CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHT----SCCCCCCCTT
T ss_pred cccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHc----cCCCCCCCcC
Confidence 32 3456778999999988889999999999999999999 8888765433222211111 1111123445
Q ss_pred HHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhcC
Q 011519 281 EGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316 (484)
Q Consensus 281 ~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 316 (484)
++..+.+++.+||+.||.+|||+.++++.|+.+...
T Consensus 250 ~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 285 (291)
T 1u46_A 250 CPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPT 285 (291)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred cCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCcc
Confidence 678899999999999999999999999999987653
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-44 Score=342.94 Aligned_cols=252 Identities=17% Similarity=0.182 Sum_probs=190.2
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCcc-HH-HHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEE
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPD-AR-QFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~~-~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 132 (484)
..+|++++.||+|+||+||+|.. .+++.||||+++...... .. .+.++...++.++||||+++++++.+.+..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 35788899999999999999994 678999999997654322 22 3445555678889999999999999999999999
Q ss_pred ecCCCCCHHhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-
Q 011519 133 EYMPNDTLAKHLFH--WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 209 (484)
Q Consensus 133 Ey~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~- 209 (484)
||+++ +|.+++.. ..+..+++..++.++.||+.||.|||++.|++||||||+|||++.++.+||+|||++......
T Consensus 86 e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 164 (290)
T 3fme_A 86 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDV 164 (290)
T ss_dssp ECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC----------
T ss_pred ehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecCCcccccccc
Confidence 99975 88887753 145679999999999999999999998548999999999999999999999999999765443
Q ss_pred --CcccCCCCCCCcccc----cCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHH
Q 011519 210 --RSYSTNLAFTPPEYL----RTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283 (484)
Q Consensus 210 --~~~~~t~~y~aPE~~----~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (484)
....||+.|+|||++ .+..++.++||||||+++|+|+||+.||........... ...........+...++
T Consensus 165 ~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 241 (290)
T 3fme_A 165 AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLK---QVVEEPSPQLPADKFSA 241 (290)
T ss_dssp -----CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHH---HHHHSCCCCCCTTTSCH
T ss_pred cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHH---HHhccCCCCcccccCCH
Confidence 234789999999996 455689999999999999999999998864221111100 11111111112234567
Q ss_pred HHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 284 ELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 284 ~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
.+.+|+.+||+.||++|||+.++++|-+
T Consensus 242 ~~~~li~~~l~~~p~~Rpt~~e~l~hp~ 269 (290)
T 3fme_A 242 EFVDFTSQCLKKNSKERPTYPELMQHPF 269 (290)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHTTSHH
T ss_pred HHHHHHHHHhhcChhhCcCHHHHHhCcc
Confidence 8999999999999999999999999744
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-44 Score=351.20 Aligned_cols=253 Identities=17% Similarity=0.160 Sum_probs=205.8
Q ss_pred CCcccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCcc-----------------HHHHHHHHHHHhcCCCCceeee
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD-----------------ARQFLEEARAVGQLRNRRLANL 118 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-----------------~~~~~~E~~~l~~l~hpniv~l 118 (484)
..+|.+++.||+|+||.||+|.. +++.||||++....... .+.+.+|+.++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 35788999999999999999999 89999999986432111 1789999999999999999999
Q ss_pred eeeeeeCCceEEEEecCCCCCHHhh------hccCCCCCCCHHHHHHHHHHHHHHHHHhhc-CCCcccccccccceeecC
Q 011519 119 LGCCCEGDERLLVAEYMPNDTLAKH------LFHWETQPMKWAMRLRVALHIAEALEYCTS-KERALYHDLNAYRIVFDD 191 (484)
Q Consensus 119 ~~~~~~~~~~~lv~Ey~~~gsL~~~------l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~-~~~ivH~Dlkp~Nill~~ 191 (484)
++++.+.+..++||||+++|+|.++ +.......+++..++.++.||+.||.|||+ . |++||||||+|||++.
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-~i~H~dl~p~Nil~~~ 187 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK-NICHRDVKPSNILMDK 187 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTS-CEECCCCCGGGEEECT
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccC-CEeecCCChHhEEEcC
Confidence 9999999999999999999999999 654336789999999999999999999999 7 9999999999999999
Q ss_pred CCCceeeccCCccccCCC--CcccCCCCCCCcccccCC-CCCC-CCceeehHHHHHHHhhCCCCCCchhh-HHhhhcccc
Q 011519 192 DVNPRLSCFGLMKNSRDG--RSYSTNLAFTPPEYLRTG-RVTP-ESVMYSFGTLLLDLLSGKHIPPSHAL-DLIRDRNIQ 266 (484)
Q Consensus 192 ~~~~kl~DfG~a~~~~~~--~~~~~t~~y~aPE~~~~~-~~~~-~~Dv~slG~~l~el~tg~~p~~~~~~-~~~~~~~~~ 266 (484)
++.+||+|||++...... ....+|+.|+|||++.+. .++. ++||||||+++|+|++|..||..... .........
T Consensus 188 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~ 267 (348)
T 2pml_X 188 NGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRT 267 (348)
T ss_dssp TSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTS
T ss_pred CCcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhc
Confidence 999999999999875443 456789999999999877 5666 99999999999999999998865422 111111100
Q ss_pred ccccccc-------------cCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHH
Q 011519 267 TLTDSCL-------------EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 267 ~~~~~~~-------------~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 310 (484)
....... ........+..+.+|+.+||+.||.+|||+.++++|-
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp 324 (348)
T 2pml_X 268 KNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHE 324 (348)
T ss_dssp CCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSG
T ss_pred cCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCc
Confidence 0000000 0001144578899999999999999999999999874
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-44 Score=377.21 Aligned_cols=243 Identities=21% Similarity=0.245 Sum_probs=201.2
Q ss_pred cCCCCCCceEEEEEe---CCCcEEEEEEecCCCC--ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCCCC
Q 011519 64 EHGEKAPNVVYKGKL---ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 138 (484)
Q Consensus 64 ~lG~G~~g~Vy~~~~---~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~~g 138 (484)
.||+|+||+||+|.+ .+++.||||+++.... ...+.|.+|+.+|.+++|||||++++++. .+..+|||||+++|
T Consensus 376 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~lv~E~~~~g 454 (635)
T 4fl3_A 376 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAELG 454 (635)
T ss_dssp EEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEEECCTTE
T ss_pred EeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCEEEEEEccCCC
Confidence 689999999999964 3568899999976432 23578999999999999999999999986 45689999999999
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-------Cc
Q 011519 139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-------RS 211 (484)
Q Consensus 139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~-------~~ 211 (484)
+|.+++. ..+.+++..++.|+.||+.||.|||+. |||||||||+|||++.++.+||+|||+++..... ..
T Consensus 455 ~L~~~l~--~~~~l~~~~~~~i~~qi~~~L~yLH~~-~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~ 531 (635)
T 4fl3_A 455 PLNKYLQ--QNRHVKDKNIIELVHQVSMGMKYLEES-NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 531 (635)
T ss_dssp EHHHHHH--HCTTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC----------
T ss_pred CHHHHHh--hCCCCCHHHHHHHHHHHHHHHHHHHHC-CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccccC
Confidence 9999996 345799999999999999999999999 9999999999999999999999999999865432 22
Q ss_pred ccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHH
Q 011519 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (484)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (484)
..+|+.|+|||++.+..++.++|||||||++|||+| |+.||............. .......+..++.++.+||.
T Consensus 532 ~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~-----~~~~~~~p~~~~~~l~~li~ 606 (635)
T 4fl3_A 532 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE-----KGERMGCPAGCPREMYDLMN 606 (635)
T ss_dssp ---CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH-----TTCCCCCCTTCCHHHHHHHH
T ss_pred CCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-----cCCCCCCCCCCCHHHHHHHH
Confidence 345678999999998899999999999999999998 998887643332221111 11122345567789999999
Q ss_pred HHhccCCCCCCChHHHHHHHHhhhc
Q 011519 291 RCLQYEPRERPNPRSLVTALVTLQK 315 (484)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~l~~~~~ 315 (484)
.||+.||++|||+.+|++.|+.+..
T Consensus 607 ~cl~~dP~~RPs~~~l~~~L~~~~~ 631 (635)
T 4fl3_A 607 LCWTYDVENRPGFAAVELRLRNYYY 631 (635)
T ss_dssp HHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred HHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 9999999999999999999987643
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-44 Score=357.89 Aligned_cols=253 Identities=19% Similarity=0.212 Sum_probs=199.2
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeC----------
Q 011519 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEG---------- 125 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~---------- 125 (484)
..|.+++.||+|+||+||+|. ..+|+.||||++..... ...+|+.+++.++||||+++++++...
T Consensus 7 ~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~ 82 (383)
T 3eb0_A 7 KKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQP 82 (383)
T ss_dssp TTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC----------
T ss_pred ceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCccccccccc
Confidence 467888999999999999999 46799999999865432 234799999999999999999998543
Q ss_pred ----------------------------CceEEEEecCCCCCHHhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHhhcCC
Q 011519 126 ----------------------------DERLLVAEYMPNDTLAKHLFH--WETQPMKWAMRLRVALHIAEALEYCTSKE 175 (484)
Q Consensus 126 ----------------------------~~~~lv~Ey~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ 175 (484)
...++||||+++ +|.+.+.. ..+..+++..+..++.||+.||.|||+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~- 160 (383)
T 3eb0_A 83 PDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSL- 160 (383)
T ss_dssp ---------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT-
T ss_pred ccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-
Confidence 338899999975 88877753 2456799999999999999999999998
Q ss_pred Ccccccccccceeec-CCCCceeeccCCccccCCC---CcccCCCCCCCcccccCCC-CCCCCceeehHHHHHHHhhCCC
Q 011519 176 RALYHDLNAYRIVFD-DDVNPRLSCFGLMKNSRDG---RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKH 250 (484)
Q Consensus 176 ~ivH~Dlkp~Nill~-~~~~~kl~DfG~a~~~~~~---~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~tg~~ 250 (484)
||+||||||+|||++ .++.+||+|||+++..... ....+|+.|+|||++.+.. ++.++|||||||++|+|++|+.
T Consensus 161 gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~ 240 (383)
T 3eb0_A 161 GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKP 240 (383)
T ss_dssp TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSC
T ss_pred cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCC
Confidence 999999999999998 6889999999999865432 4567899999999988754 8999999999999999999999
Q ss_pred CCCchhhHHhhhcccc-----------------------ccccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHH
Q 011519 251 IPPSHALDLIRDRNIQ-----------------------TLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLV 307 (484)
Q Consensus 251 p~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il 307 (484)
||.............. ..........++...++++.+|+.+||+.||.+|||+.+++
T Consensus 241 pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l 320 (383)
T 3eb0_A 241 LFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAM 320 (383)
T ss_dssp SSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHH
T ss_pred CCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHh
Confidence 9875432211111000 00000011113445678899999999999999999999999
Q ss_pred HH--HHhhhc
Q 011519 308 TA--LVTLQK 315 (484)
Q Consensus 308 ~~--l~~~~~ 315 (484)
+| +..+..
T Consensus 321 ~hp~f~~~~~ 330 (383)
T 3eb0_A 321 AHPFFDHLRN 330 (383)
T ss_dssp TSGGGHHHHH
T ss_pred cCHHHHHHHh
Confidence 88 444443
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-44 Score=342.05 Aligned_cols=253 Identities=17% Similarity=0.146 Sum_probs=206.8
Q ss_pred cCCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCc---------cHHHHHHHHHHHhcCC-CCceeeeeeee
Q 011519 54 SGFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP---------DARQFLEEARAVGQLR-NRRLANLLGCC 122 (484)
Q Consensus 54 ~~f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---------~~~~~~~E~~~l~~l~-hpniv~l~~~~ 122 (484)
.-+..|++++.||+|+||.||+|.. .+++.||||++...... ..+.+.+|+.++++++ ||||+++++++
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (298)
T 1phk_A 14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY 93 (298)
T ss_dssp -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence 3457889999999999999999995 57899999999754311 1356889999999996 99999999999
Q ss_pred eeCCceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCC
Q 011519 123 CEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGL 202 (484)
Q Consensus 123 ~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~ 202 (484)
...+..++||||+++++|.+++.. ...+++..++.++.||+.||.|||+. |++|+||||+||+++.++.+||+|||+
T Consensus 94 ~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dl~p~Nil~~~~~~~kl~dfg~ 170 (298)
T 1phk_A 94 ETNTFFFLVFDLMKKGELFDYLTE--KVTLSEKETRKIMRALLEVICALHKL-NIVHRDLKPENILLDDDMNIKLTDFGF 170 (298)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred ccCCeEEEEEeccCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCcceEEEcCCCcEEEecccc
Confidence 999999999999999999999973 45799999999999999999999999 999999999999999999999999999
Q ss_pred ccccCCC---CcccCCCCCCCccccc------CCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccc
Q 011519 203 MKNSRDG---RSYSTNLAFTPPEYLR------TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCL 273 (484)
Q Consensus 203 a~~~~~~---~~~~~t~~y~aPE~~~------~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 273 (484)
+...... ....+|+.|+|||++. ...++.++||||||+++|+|++|..||.................. .
T Consensus 171 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~ 248 (298)
T 1phk_A 171 SCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQ--F 248 (298)
T ss_dssp CEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC--C
T ss_pred hhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCcc--c
Confidence 9875543 3456889999999985 456889999999999999999999988654322221111111000 0
Q ss_pred cCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 274 EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 274 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
........+..+.+|+.+||+.||.+|||+.++++|-+
T Consensus 249 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~ 286 (298)
T 1phk_A 249 GSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPF 286 (298)
T ss_dssp CTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGG
T ss_pred CcccccccCHHHHHHHHHHccCCcccCCCHHHHHhChH
Confidence 11112346788999999999999999999999998743
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-44 Score=354.14 Aligned_cols=249 Identities=18% Similarity=0.232 Sum_probs=200.0
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCceeeeeeeeeeC-----CceEE
Q 011519 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEG-----DERLL 130 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-----~~~~l 130 (484)
.|.+++.||+|+||+||+|.. .+++.||||++...... ..+.+.+|+.++.+++||||+++++++... ...++
T Consensus 28 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~i 107 (364)
T 3qyz_A 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYI 107 (364)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEE
T ss_pred cEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEE
Confidence 688899999999999999994 57889999999754433 246789999999999999999999998765 36899
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-
Q 011519 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 209 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~- 209 (484)
||||+. |+|.+++.. +.+++..+..++.||+.||.|||+. ||+||||||+|||++.++.+||+|||++......
T Consensus 108 v~e~~~-~~L~~~l~~---~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~ 182 (364)
T 3qyz_A 108 VQDLME-TDLYKLLKT---QHLSNDHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 182 (364)
T ss_dssp EEECCS-EEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEECCGGG
T ss_pred EEcccC-cCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCChHhEEECCCCCEEEEeCcceEecCCCC
Confidence 999996 599999953 4699999999999999999999999 9999999999999999999999999999865432
Q ss_pred ------CcccCCCCCCCcccccC-CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccc-------------
Q 011519 210 ------RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLT------------- 269 (484)
Q Consensus 210 ------~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~------------- 269 (484)
....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||...............+.
T Consensus 183 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 262 (364)
T 3qyz_A 183 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 262 (364)
T ss_dssp CBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCH
T ss_pred CccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhh
Confidence 34578999999998765 4489999999999999999999998865422111100000000
Q ss_pred ------ccc-ccC-----CCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 270 ------DSC-LEG-----QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 270 ------~~~-~~~-----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
... ... ......++++.+|+.+||+.||.+|||+.++++|-+
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 316 (364)
T 3qyz_A 263 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 316 (364)
T ss_dssp HHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGG
T ss_pred hHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcc
Confidence 000 000 011334678999999999999999999999999854
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-43 Score=344.17 Aligned_cols=254 Identities=19% Similarity=0.249 Sum_probs=201.6
Q ss_pred CCCcccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCC--ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEE
Q 011519 55 GFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (484)
Q Consensus 55 ~f~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 132 (484)
.+.+|++.+.||+|+||+||+|.... .||||+++.... ...+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 31 ~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~ 108 (319)
T 2y4i_B 31 PFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIIT 108 (319)
T ss_dssp CCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEEC
T ss_pred CHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEe
Confidence 45788999999999999999999754 499999875432 22456889999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC----
Q 011519 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD---- 208 (484)
Q Consensus 133 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~---- 208 (484)
||+++++|.+++.. .+..+++..++.++.||+.||.|||+. |++||||||+|||++ ++.+||+|||++.....
T Consensus 109 e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~-~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~ 185 (319)
T 2y4i_B 109 SLCKGRTLYSVVRD-AKIVLDVNKTRQIAQEIVKGMGYLHAK-GILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAG 185 (319)
T ss_dssp BCCCSEEHHHHTTS-SCCCCCSHHHHHHHHHHHHHHHHHHHT-TCCCCCCCSTTEEEC---CCEECCCSCCC--------
T ss_pred ecccCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhC-CccccCCChhhEEEe-CCCEEEeecCCcccccccccc
Confidence 99999999999964 334699999999999999999999999 999999999999998 68999999999775421
Q ss_pred -----CCcccCCCCCCCcccccC---------CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcccccccccccc
Q 011519 209 -----GRSYSTNLAFTPPEYLRT---------GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLE 274 (484)
Q Consensus 209 -----~~~~~~t~~y~aPE~~~~---------~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 274 (484)
.....||+.|+|||++.+ ..++.++||||||+++|+|++|..||...................
T Consensus 186 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~--- 262 (319)
T 2y4i_B 186 RREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPN--- 262 (319)
T ss_dssp --CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTTCCCC---
T ss_pred ccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccCCCCC---
Confidence 123457899999999874 347889999999999999999999887543332221111111111
Q ss_pred CCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhcCC
Q 011519 275 GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (484)
Q Consensus 275 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 317 (484)
..+...+..+.+|+..||..||.+|||+.++++.|+.+....
T Consensus 263 -~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~ 304 (319)
T 2y4i_B 263 -LSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN 304 (319)
T ss_dssp -CCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC----
T ss_pred -CCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhh
Confidence 112234567999999999999999999999999999887654
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-43 Score=345.79 Aligned_cols=253 Identities=18% Similarity=0.198 Sum_probs=201.9
Q ss_pred CcccccccCCCCCCceEEEEEe--CCCcEEEEEEecCCCC--ccHHHHHHHHHHHhcC---CCCceeeeeeeee-----e
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL--ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQL---RNRRLANLLGCCC-----E 124 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~hpniv~l~~~~~-----~ 124 (484)
.+|.+++.||+|+||+||+|.. .+++.||||++..... .....+.+|+.+++.+ +||||+++++++. .
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~ 90 (326)
T 1blx_A 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 90 (326)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSS
T ss_pred hceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCC
Confidence 4678899999999999999996 4688999999864321 1233566777777666 8999999999987 4
Q ss_pred CCceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCcc
Q 011519 125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK 204 (484)
Q Consensus 125 ~~~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~ 204 (484)
....++||||++ |+|.+++.......+++..++.++.||+.||.|||+. |++||||||+|||++.++.+||+|||++.
T Consensus 91 ~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-gi~H~dlkp~Nili~~~~~~kl~Dfg~~~ 168 (326)
T 1blx_A 91 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH-RVVHRDLKPQNILVTSSGQIKLADFGLAR 168 (326)
T ss_dssp EEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTCCEEECSCCSCC
T ss_pred CceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCHHHeEEcCCCCEEEecCcccc
Confidence 567899999997 5999999765556699999999999999999999999 99999999999999999999999999988
Q ss_pred ccCCC---CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcccc--------ccc----
Q 011519 205 NSRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ--------TLT---- 269 (484)
Q Consensus 205 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~--------~~~---- 269 (484)
..... ....+|+.|+|||++.+..++.++||||||+++|+|+||+.||.............. ...
T Consensus 169 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 248 (326)
T 1blx_A 169 IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVA 248 (326)
T ss_dssp CCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCS
T ss_pred cccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccccc
Confidence 65432 345789999999999988899999999999999999999998875432211110000 000
Q ss_pred --c-------ccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 270 --D-------SCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 270 --~-------~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
. ......+....+..+.+|+.+||..||.+|||+.++++|-+
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~ 299 (326)
T 1blx_A 249 LPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPY 299 (326)
T ss_dssp SCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGG
T ss_pred cchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCcc
Confidence 0 00001123446788999999999999999999999998743
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-44 Score=348.79 Aligned_cols=249 Identities=15% Similarity=0.146 Sum_probs=176.6
Q ss_pred ccccccc-CCCCCCceEEEEEe-CCCcEEEEEEecCCCCccHHHHHHHH-HHHhcCCCCceeeeeeeeee----CCceEE
Q 011519 58 MENIVSE-HGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEA-RAVGQLRNRRLANLLGCCCE----GDERLL 130 (484)
Q Consensus 58 ~~~~~~~-lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~-~~l~~l~hpniv~l~~~~~~----~~~~~l 130 (484)
+|.++++ ||+|+||+||+|.. .+++.||||++.... ...+|+ ..++.+.||||+++++++.. ....++
T Consensus 29 ~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 103 (336)
T 3fhr_A 29 DYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLI 103 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH-----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred eeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH-----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEE
Confidence 6777664 89999999999995 478999999996431 223333 34566799999999999876 445899
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecC---CCCceeeccCCccccC
Q 011519 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD---DVNPRLSCFGLMKNSR 207 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~---~~~~kl~DfG~a~~~~ 207 (484)
||||++||+|.+++.......+++.+++.++.||+.||.|||+. |++||||||+|||++. ++.+||+|||++....
T Consensus 104 v~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~-~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~ 182 (336)
T 3fhr_A 104 IMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH-NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT 182 (336)
T ss_dssp EEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC-
T ss_pred EEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CeecCCCCHHHEEEEecCCCceEEEeccccceecc
Confidence 99999999999999865556799999999999999999999999 9999999999999986 4559999999998655
Q ss_pred CC--CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcccccccccc--ccCCCChHHHH
Q 011519 208 DG--RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSC--LEGQFSSDEGT 283 (484)
Q Consensus 208 ~~--~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 283 (484)
.. ....+|+.|+|||++.+..++.++||||||+++|+|++|..||...............+.... ........++.
T Consensus 183 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (336)
T 3fhr_A 183 QNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSE 262 (336)
T ss_dssp ---------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTTTSTTCCH
T ss_pred ccccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCchhhccCCH
Confidence 43 345779999999999888899999999999999999999998865433222111111111110 11111235678
Q ss_pred HHHHHHHHHhccCCCCCCChHHHHHHHHh
Q 011519 284 ELVRLASRCLQYEPRERPNPRSLVTALVT 312 (484)
Q Consensus 284 ~l~~li~~cl~~dp~~Rps~~~il~~l~~ 312 (484)
.+.+|+.+||+.||.+|||+.++++|.+-
T Consensus 263 ~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 291 (336)
T 3fhr_A 263 DAKQLIRLLLKTDPTERLTITQFMNHPWI 291 (336)
T ss_dssp HHHHHHHHHSCSSGGGSCCHHHHHHSHHH
T ss_pred HHHHHHHHHCCCChhHCcCHHHHhcCccc
Confidence 89999999999999999999999998654
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-44 Score=348.07 Aligned_cols=243 Identities=16% Similarity=0.171 Sum_probs=195.7
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCC--------ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCc
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--------PDARQFLEEARAVGQLRNRRLANLLGCCCEGDE 127 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~ 127 (484)
.+|.+++.||+|+||.||+|.. .+++.||||++..... .....+.+|+.++++++||||+++++++....
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 88 (322)
T 2ycf_A 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED- 88 (322)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-
T ss_pred hceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-
Confidence 3678889999999999999995 5689999999975432 11335889999999999999999999987654
Q ss_pred eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCC---ceeeccCCcc
Q 011519 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN---PRLSCFGLMK 204 (484)
Q Consensus 128 ~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~---~kl~DfG~a~ 204 (484)
.++||||+++|+|.+++. ....+++..++.++.||+.||.|||+. |++||||||+|||++.++. +||+|||++.
T Consensus 89 ~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~ 165 (322)
T 2ycf_A 89 YYIVLELMEGGELFDKVV--GNKRLKEATCKLYFYQMLLAVQYLHEN-GIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 165 (322)
T ss_dssp EEEEEECCTTEETHHHHS--TTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEESSSSSSCCEEECCCTTCE
T ss_pred eEEEEecCCCCcHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCCHHHEEEecCCCCCeEEEccCccce
Confidence 899999999999999996 456799999999999999999999999 9999999999999986654 9999999998
Q ss_pred ccCCCC---cccCCCCCCCccccc---CCCCCCCCceeehHHHHHHHhhCCCCCCchhhH-----Hhhhccccccccccc
Q 011519 205 NSRDGR---SYSTNLAFTPPEYLR---TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALD-----LIRDRNIQTLTDSCL 273 (484)
Q Consensus 205 ~~~~~~---~~~~t~~y~aPE~~~---~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~-----~~~~~~~~~~~~~~~ 273 (484)
...... ...||+.|+|||++. +..++.++|||||||++|+|++|..||...... .+...... ...
T Consensus 166 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~-~~~--- 241 (322)
T 2ycf_A 166 ILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYN-FIP--- 241 (322)
T ss_dssp ECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCC-CCH---
T ss_pred ecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccc-cCc---
Confidence 765542 356899999999974 456899999999999999999999988643211 11111100 000
Q ss_pred cCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 274 EGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 274 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
......+..+.+|+.+||..||++|||+.++++|
T Consensus 242 --~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h 275 (322)
T 2ycf_A 242 --EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 275 (322)
T ss_dssp --HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred --hhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhC
Confidence 0112346789999999999999999999999976
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-44 Score=362.64 Aligned_cols=252 Identities=14% Similarity=0.174 Sum_probs=202.6
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCC--------CCceeeeeeeee----
Q 011519 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR--------NRRLANLLGCCC---- 123 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------hpniv~l~~~~~---- 123 (484)
.+|.+++.||+|+||+||+|+ ..+++.||||+++... ...+.+.+|+.+++.++ ||||+++++++.
T Consensus 37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~ 115 (397)
T 1wak_A 37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE-HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGV 115 (397)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEET
T ss_pred CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCC-cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCC
Confidence 578999999999999999999 4678999999997542 23567899999999985 788999999987
Q ss_pred eCCceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCC----------
Q 011519 124 EGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV---------- 193 (484)
Q Consensus 124 ~~~~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~---------- 193 (484)
.....++||||+ +++|.+++.....+.+++..++.++.||+.||.|||++.||+||||||+|||++.++
T Consensus 116 ~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~~~~~ 194 (397)
T 1wak_A 116 NGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEA 194 (397)
T ss_dssp TEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHHHHHH
T ss_pred CCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhhhhhh
Confidence 456789999999 667777776545567999999999999999999999854899999999999999775
Q ss_pred ---------------------------------------CceeeccCCccccCCC-CcccCCCCCCCcccccCCCCCCCC
Q 011519 194 ---------------------------------------NPRLSCFGLMKNSRDG-RSYSTNLAFTPPEYLRTGRVTPES 233 (484)
Q Consensus 194 ---------------------------------------~~kl~DfG~a~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~ 233 (484)
.+||+|||++...... ....||+.|+|||++.+..++.++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~ 274 (397)
T 1wak_A 195 TEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPA 274 (397)
T ss_dssp C---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSCCCTHH
T ss_pred HHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhcCCCCCcHH
Confidence 8999999999876543 456789999999999998899999
Q ss_pred ceeehHHHHHHHhhCCCCCCchhhH-------H---hh---hccc--------------------ccccccc--------
Q 011519 234 VMYSFGTLLLDLLSGKHIPPSHALD-------L---IR---DRNI--------------------QTLTDSC-------- 272 (484)
Q Consensus 234 Dv~slG~~l~el~tg~~p~~~~~~~-------~---~~---~~~~--------------------~~~~~~~-------- 272 (484)
|||||||++|+|+||+.||...... . .. .... ..+....
T Consensus 275 DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (397)
T 1wak_A 275 DIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVL 354 (397)
T ss_dssp HHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHH
T ss_pred HHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHhh
Confidence 9999999999999999988642110 0 00 0000 0000000
Q ss_pred -ccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHH
Q 011519 273 -LEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 273 -~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 310 (484)
....++...+..+.+||.+||+.||++|||+.++++|-
T Consensus 355 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp 393 (397)
T 1wak_A 355 VEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHP 393 (397)
T ss_dssp HHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSG
T ss_pred hhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCc
Confidence 01124567788999999999999999999999999874
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-43 Score=344.55 Aligned_cols=250 Identities=17% Similarity=0.174 Sum_probs=204.8
Q ss_pred CcccccccCCCCCCceEEEEEe--CCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCc------eeeeeeeeeeCCce
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL--ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRR------LANLLGCCCEGDER 128 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpn------iv~l~~~~~~~~~~ 128 (484)
.+|++++.||+|+||+||+|.. .+++.||||+++... ...+.+.+|+.++..++|++ |+++++++...+..
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~ 92 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHI 92 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEE
T ss_pred CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcE
Confidence 4788999999999999999985 368899999997532 33567889999999887654 99999999999999
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecC-----------------
Q 011519 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD----------------- 191 (484)
Q Consensus 129 ~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~----------------- 191 (484)
++||||+ +++|.+++......++++..+..++.||+.||.|||+. |++||||||+|||++.
T Consensus 93 ~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~ 170 (339)
T 1z57_A 93 CIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN-KLTHTDLKPENILFVQSDYTEAYNPKIKRDERT 170 (339)
T ss_dssp EEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESCCCEEEEEC----CEEEE
T ss_pred EEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHC-CCcCCCCCHHHEEEeccccccccCCcccccccc
Confidence 9999999 88999999765556799999999999999999999999 9999999999999987
Q ss_pred --CCCceeeccCCccccCCC-CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcc---c
Q 011519 192 --DVNPRLSCFGLMKNSRDG-RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN---I 265 (484)
Q Consensus 192 --~~~~kl~DfG~a~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~---~ 265 (484)
++.+||+|||++...... ....||+.|+|||++.+..++.++|||||||++|||++|..||............ .
T Consensus 171 ~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 250 (339)
T 1z57_A 171 LINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERIL 250 (339)
T ss_dssp ESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHH
T ss_pred ccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh
Confidence 678999999999875543 4567899999999999888999999999999999999999998754222111000 0
Q ss_pred cccc----------------------------------cc-cccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 266 QTLT----------------------------------DS-CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 266 ~~~~----------------------------------~~-~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
.... .. ......+...++.+.+|+.+||+.||.+|||+.++++|
T Consensus 251 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 329 (339)
T 1z57_A 251 GPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKH 329 (339)
T ss_dssp CSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred CCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcC
Confidence 0000 00 00011234567889999999999999999999999987
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-43 Score=344.29 Aligned_cols=250 Identities=17% Similarity=0.219 Sum_probs=194.7
Q ss_pred CcccccccCCCCCCceEEEEEeC-CCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeee------------
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCC------------ 123 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~------------ 123 (484)
.+|.+++.||+|+||.||+|... +++.||||++........+.+.+|+.++++++||||+++++++.
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 90 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS 90 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence 57888999999999999999954 58999999997665455678999999999999999999998873
Q ss_pred --eCCceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeec-CCCCceeecc
Q 011519 124 --EGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD-DDVNPRLSCF 200 (484)
Q Consensus 124 --~~~~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~-~~~~~kl~Df 200 (484)
+....++||||++ |+|.+++. .+.+++..++.++.||+.||.|||+. |++||||||+|||++ .++.+||+||
T Consensus 91 ~~~~~~~~lv~e~~~-~~L~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~~kl~Df 165 (320)
T 2i6l_A 91 LTELNSVYIVQEYME-TDLANVLE---QGPLLEEHARLFMYQLLRGLKYIHSA-NVLHRDLKPANLFINTEDLVLKIGDF 165 (320)
T ss_dssp CCSCSEEEEEEECCS-EEHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCSGGGEEEETTTTEEEECCC
T ss_pred ccccCceeEEeeccC-CCHHHHhh---cCCccHHHHHHHHHHHHHHHHHHHhC-CEecCCCCHHHEEEcCCCCeEEEccC
Confidence 3467899999997 59999994 45799999999999999999999999 999999999999997 5679999999
Q ss_pred CCccccCCC-------CcccCCCCCCCcccccC-CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcccccc----
Q 011519 201 GLMKNSRDG-------RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL---- 268 (484)
Q Consensus 201 G~a~~~~~~-------~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~---- 268 (484)
|+++..... ....+|+.|+|||.+.+ ..++.++||||||+++|+|+||+.||................
T Consensus 166 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 245 (320)
T 2i6l_A 166 GLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVH 245 (320)
T ss_dssp TTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCC
T ss_pred ccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCc
Confidence 999865421 23456889999998875 668999999999999999999999887543211111000000
Q ss_pred --------------ccccc-cC-----CCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 269 --------------TDSCL-EG-----QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 269 --------------~~~~~-~~-----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
..... .. ......+..+.+|+.+||+.||.+|||+.++++|-+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 308 (320)
T 2i6l_A 246 EEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPY 308 (320)
T ss_dssp HHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHH
T ss_pred hhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCcc
Confidence 00000 00 011335688999999999999999999999999844
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-44 Score=359.33 Aligned_cols=248 Identities=22% Similarity=0.230 Sum_probs=194.4
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCC------ceEE
Q 011519 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD------ERLL 130 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~------~~~l 130 (484)
.|.+++.||+|+||+||+|+. .+++.||||++.... +.+.+|+++|+.++|||||++++++.... ..++
T Consensus 55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~l 130 (420)
T 1j1b_A 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 130 (420)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEE
T ss_pred eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEe
Confidence 578888999999999999995 568999999986543 22347999999999999999999985421 3679
Q ss_pred EEecCCCCCHHhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCC-CCceeeccCCccccC
Q 011519 131 VAEYMPNDTLAKHLFH--WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD-VNPRLSCFGLMKNSR 207 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~-~~~kl~DfG~a~~~~ 207 (484)
||||+++ +|.+.+.. .....+++..+..++.||+.||.|||+. ||+||||||+|||++.+ +.+||+|||+++...
T Consensus 131 v~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~ 208 (420)
T 1j1b_A 131 VLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF-GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 208 (420)
T ss_dssp EEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT-TEECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred ehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCChhhEEEeCCCCeEEeccchhhhhcc
Confidence 9999976 67766642 2356799999999999999999999998 99999999999999955 568999999998654
Q ss_pred CC---CcccCCCCCCCcccccCC-CCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcccc-----------------
Q 011519 208 DG---RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ----------------- 266 (484)
Q Consensus 208 ~~---~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~----------------- 266 (484)
.. ....+|+.|+|||++.+. .++.++|||||||++|||++|+.||..............
T Consensus 209 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~ 288 (420)
T 1j1b_A 209 RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 288 (420)
T ss_dssp TTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCC
T ss_pred cCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhh
Confidence 32 356789999999999765 689999999999999999999999875422111000000
Q ss_pred -ccccc-----cccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 267 -TLTDS-----CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 267 -~~~~~-----~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
...-+ .+...++...++++.+||.+||..||.+|||+.++++|-+
T Consensus 289 ~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~ 339 (420)
T 1j1b_A 289 TEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 339 (420)
T ss_dssp CCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred hhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHh
Confidence 00000 0000123345688999999999999999999999998843
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-43 Score=343.22 Aligned_cols=256 Identities=16% Similarity=0.178 Sum_probs=184.4
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCc-cHHHHHHHHH-HHhcCCCCceeeeeeeeeeCCceEEEE
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-DARQFLEEAR-AVGQLRNRRLANLLGCCCEGDERLLVA 132 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~-~l~~l~hpniv~l~~~~~~~~~~~lv~ 132 (484)
..+|++++.||+|+||.||+|.. .+++.||||++...... ...++..|+. +++.++||||+++++++...+..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 46788889999999999999995 57899999999765432 2445666766 677789999999999999999999999
Q ss_pred ecCCCCCHHhhhcc---CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC
Q 011519 133 EYMPNDTLAKHLFH---WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 209 (484)
Q Consensus 133 Ey~~~gsL~~~l~~---~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 209 (484)
||+++ +|.+++.. .....+++..+..++.|++.||.|||+..|++||||||+|||++.++.+||+|||+++.....
T Consensus 101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 179 (327)
T 3aln_A 101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDS 179 (327)
T ss_dssp CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC----
T ss_pred eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEccCCCceecccc
Confidence 99975 88887752 235679999999999999999999999548999999999999999999999999999875443
Q ss_pred ---CcccCCCCCCCcccc----cCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHH
Q 011519 210 ---RSYSTNLAFTPPEYL----RTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG 282 (484)
Q Consensus 210 ---~~~~~t~~y~aPE~~----~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (484)
....||+.|+|||++ .+..++.++||||||+++|+|++|+.||...............-.............+
T Consensus 180 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (327)
T 3aln_A 180 IAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFS 259 (327)
T ss_dssp --------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCCCCCCCCSSCCCC
T ss_pred cccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCcccccCC
Confidence 234689999999998 4566899999999999999999999988653211110001100001111111223457
Q ss_pred HHHHHHHHHHhccCCCCCCChHHHHHHHHh
Q 011519 283 TELVRLASRCLQYEPRERPNPRSLVTALVT 312 (484)
Q Consensus 283 ~~l~~li~~cl~~dp~~Rps~~~il~~l~~ 312 (484)
+.+.+|+.+||+.||.+|||+.+++++.+-
T Consensus 260 ~~l~~li~~~l~~dp~~Rps~~ell~hp~~ 289 (327)
T 3aln_A 260 PSFINFVNLCLTKDESKRPKYKELLKHPFI 289 (327)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHTTSHHH
T ss_pred HHHHHHHHHHhhCChhhCcCHHHHHhChHH
Confidence 889999999999999999999999987443
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-43 Score=338.74 Aligned_cols=246 Identities=19% Similarity=0.246 Sum_probs=194.3
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeee------------
Q 011519 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE------------ 124 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~------------ 124 (484)
+|++++.||+|+||+||+|+. .+++.||||++.... ...+.+.+|+.+++.++||||+++++++.+
T Consensus 7 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~ 85 (303)
T 1zy4_A 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE-EKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVK 85 (303)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEH-HHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------
T ss_pred cchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccH-HHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccc
Confidence 578888899999999999995 578999999996432 335678999999999999999999998865
Q ss_pred -CCceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCc
Q 011519 125 -GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLM 203 (484)
Q Consensus 125 -~~~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a 203 (484)
.+..++||||+++|+|.+++.. ....+++..++.++.||+.||.|||+. |++||||||+|||++.++.+||+|||++
T Consensus 86 ~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~-~i~H~dlkp~Nil~~~~~~~kl~dfg~~ 163 (303)
T 1zy4_A 86 KKSTLFIQMEYCENGTLYDLIHS-ENLNQQRDEYWRLFRQILEALSYIHSQ-GIIHRDLKPMNIFIDESRNVKIGDFGLA 163 (303)
T ss_dssp CEEEEEEEEECCCSCBHHHHHHH-SCGGGCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTSCEEECCCCCC
T ss_pred cCCceEEEEecCCCCCHHHhhhc-cccccchHHHHHHHHHHHHHHHHHHhC-CeecccCCHHhEEEcCCCCEEEeeCcch
Confidence 3567999999999999999974 334688999999999999999999999 9999999999999999999999999998
Q ss_pred cccCCC------------------CcccCCCCCCCcccccCC-CCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcc
Q 011519 204 KNSRDG------------------RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN 264 (484)
Q Consensus 204 ~~~~~~------------------~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~ 264 (484)
...... ....||+.|+|||++.+. .++.++|||||||++|+|++ |+............
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~~~~~ 240 (303)
T 1zy4_A 164 KNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKK 240 (303)
T ss_dssp SCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHH
T ss_pred hhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHHHHHh
Confidence 765421 234678999999999864 68999999999999999998 33322111100001
Q ss_pred ccccccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHH
Q 011519 265 IQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 310 (484)
... ........++...+..+.+|+.+||+.||.+|||+.+++++.
T Consensus 241 ~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~ 285 (303)
T 1zy4_A 241 LRS-VSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSG 285 (303)
T ss_dssp HHS-TTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSS
T ss_pred ccc-cccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCC
Confidence 110 011122234555677899999999999999999999999874
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-43 Score=345.73 Aligned_cols=250 Identities=15% Similarity=0.190 Sum_probs=199.6
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCceeeeeeeeeeC-----CceE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEG-----DERL 129 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-----~~~~ 129 (484)
.+|.+++.||+|+||+||+|.. .+|+.||||++...... ....+.+|+.+++.++||||+++++++... ...+
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 90 (353)
T 2b9h_A 11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVY 90 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEE
T ss_pred cceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEE
Confidence 4678889999999999999995 57899999999754332 245788999999999999999999988654 6789
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC
Q 011519 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG 209 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 209 (484)
+||||+. |+|.+++.. +.+++..+..++.||+.||.|||+. |++||||||+|||++.++.+||+|||++......
T Consensus 91 lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~-~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~ 165 (353)
T 2b9h_A 91 IIQELMQ-TDLHRVIST---QMLSDDHIQYFIYQTLRAVKVLHGS-NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDES 165 (353)
T ss_dssp EEECCCS-EEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECTTCCEEECCCTTCEECC--
T ss_pred EEEeccC-ccHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHHC-CeecCCCCHHHeEEcCCCcEEEEecccccccccc
Confidence 9999996 599999853 4699999999999999999999999 9999999999999999999999999999865421
Q ss_pred --------------CcccCCCCCCCcccccC-CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccc---------
Q 011519 210 --------------RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI--------- 265 (484)
Q Consensus 210 --------------~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~--------- 265 (484)
....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.............
T Consensus 166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 245 (353)
T 2b9h_A 166 AADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSD 245 (353)
T ss_dssp --------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCST
T ss_pred cccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchh
Confidence 12467899999998765 668999999999999999999999887543211100000
Q ss_pred ---c--------cccccccc------CCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 266 ---Q--------TLTDSCLE------GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 266 ---~--------~~~~~~~~------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
. ........ .......++.+.+|+.+||+.||.+|||+.++++|-+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 308 (353)
T 2b9h_A 246 NDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPY 308 (353)
T ss_dssp TTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred ccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCcc
Confidence 0 00000000 0011345678999999999999999999999999844
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-43 Score=348.28 Aligned_cols=249 Identities=15% Similarity=0.202 Sum_probs=197.7
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCcc--HHHHHHHHHHHhcCCCCceeeeeeeeeeCCce-----
Q 011519 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLGCCCEGDER----- 128 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~----- 128 (484)
..|.+++.||+|+||+||+|. ..+|+.||||++....... .+.+.+|+.+++.++||||+++++++...+..
T Consensus 42 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 121 (371)
T 4exu_A 42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 121 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCC
T ss_pred ccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccccee
Confidence 467788889999999999999 4578999999997654332 56789999999999999999999999877654
Q ss_pred -EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccC
Q 011519 129 -LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 207 (484)
Q Consensus 129 -~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~ 207 (484)
++||||+. ++|.+++. ..+++..+..++.||+.||.|||+. ||+||||||+|||++.++.+||+|||+++...
T Consensus 122 ~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~ 195 (371)
T 4exu_A 122 FYLVMPFMQ-TDLQKIMG----MEFSEEKIQYLVYQMLKGLKYIHSA-GVVHRDLKPGNLAVNEDCELKILDFGLARHAD 195 (371)
T ss_dssp CEEEEECCC-EEHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTCCEEECSTTCC----
T ss_pred EEEEEcccc-ccHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHHC-CCcCCCcCHHHeEECCCCCEEEEecCcccccc
Confidence 99999997 58988873 3499999999999999999999999 99999999999999999999999999998765
Q ss_pred CC-CcccCCCCCCCcccccC-CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccc------------------
Q 011519 208 DG-RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQT------------------ 267 (484)
Q Consensus 208 ~~-~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~------------------ 267 (484)
.. ....+|+.|+|||++.+ ..++.++|||||||++|+|+||+.||...............
T Consensus 196 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 275 (371)
T 4exu_A 196 AEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAK 275 (371)
T ss_dssp ----CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHH
T ss_pred cCcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhh
Confidence 43 45678999999999987 67899999999999999999999998754221111100000
Q ss_pred -c---ccccccC---CCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 268 -L---TDSCLEG---QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 268 -~---~~~~~~~---~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
. ....... ......++.+.+|+.+||+.||.+|||+.++++|-+
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 326 (371)
T 4exu_A 276 SYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPF 326 (371)
T ss_dssp HHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGG
T ss_pred hhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCcc
Confidence 0 0000000 011234688999999999999999999999999844
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-43 Score=349.00 Aligned_cols=260 Identities=15% Similarity=0.186 Sum_probs=197.3
Q ss_pred HHHHHHHhcCCCcccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCcc-----------HHHHHHHHHHHhcCCCCc
Q 011519 46 IETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD-----------ARQFLEEARAVGQLRNRR 114 (484)
Q Consensus 46 ~~~~~~~~~~f~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~hpn 114 (484)
+.++....+ .|.+++.||+|+||.||+|...+++.||||++....... .+.+.+|+.++++++|||
T Consensus 14 ~~~~~~~~~---~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 90 (362)
T 3pg1_A 14 IAELHAMQS---PYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPN 90 (362)
T ss_dssp HHHHHHTTC---SCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTT
T ss_pred HHHHHHhcc---ceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcC
Confidence 344444444 567778889999999999998789999999986432211 367999999999999999
Q ss_pred eeeeeeeeeeC-----CceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceee
Q 011519 115 LANLLGCCCEG-----DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF 189 (484)
Q Consensus 115 iv~l~~~~~~~-----~~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill 189 (484)
|+++++++... ...++||||++ |+|.+++.. ....+++..+..++.||+.||.|||+. |++||||||+|||+
T Consensus 91 iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~-~ivH~Dlkp~NIl~ 167 (362)
T 3pg1_A 91 ILGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHD-QRIVISPQHIQYFMYHILLGLHVLHEA-GVVHRDLHPGNILL 167 (362)
T ss_dssp BCCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEE
T ss_pred ccceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHC-cCEecCCChHHEEE
Confidence 99999998543 35799999997 588888864 445799999999999999999999999 99999999999999
Q ss_pred cCCCCceeeccCCccccCCC---CcccCCCCCCCcccccC-CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccc
Q 011519 190 DDDVNPRLSCFGLMKNSRDG---RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI 265 (484)
Q Consensus 190 ~~~~~~kl~DfG~a~~~~~~---~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~ 265 (484)
+.++.+||+|||++...... ....+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.............
T Consensus 168 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~ 247 (362)
T 3pg1_A 168 ADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIV 247 (362)
T ss_dssp CTTCCEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred cCCCCEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 99999999999999754332 34578899999999887 668999999999999999999999987543211111000
Q ss_pred c-----------------------cccccccc---CCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 266 Q-----------------------TLTDSCLE---GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 266 ~-----------------------~~~~~~~~---~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
. ........ .......++.+.+|+.+||+.||.+|||+.++++|-+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 319 (362)
T 3pg1_A 248 EVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPY 319 (362)
T ss_dssp HHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGG
T ss_pred HHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCch
Confidence 0 00000000 0012334678999999999999999999999999843
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-43 Score=353.34 Aligned_cols=248 Identities=18% Similarity=0.203 Sum_probs=194.5
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCc------eEE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDE------RLL 130 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~------~~l 130 (484)
..|.+++.||+|+||+||+|....+..||+|++..... ...+|+.+++.++||||+++++++...+. .++
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l 115 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL 115 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence 46888999999999999999977666799998864331 22379999999999999999999965443 789
Q ss_pred EEecCCCCCHHhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeec-CCCCceeeccCCccccC
Q 011519 131 VAEYMPNDTLAKHLFH--WETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD-DDVNPRLSCFGLMKNSR 207 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~-~~~~~kl~DfG~a~~~~ 207 (484)
||||++++ |...+.. .....+++..+..++.||+.||.|||+. ||+||||||+|||++ .++.+||+|||+++...
T Consensus 116 v~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~-~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~ 193 (394)
T 4e7w_A 116 VLEYVPET-VYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI-GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILI 193 (394)
T ss_dssp EEECCSEE-HHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred EeeccCcc-HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC-CccCCCCCHHHEEEcCCCCcEEEeeCCCccccc
Confidence 99999874 4444321 1346799999999999999999999999 999999999999999 79999999999998754
Q ss_pred C---CCcccCCCCCCCcccccCC-CCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcccc-----------------
Q 011519 208 D---GRSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ----------------- 266 (484)
Q Consensus 208 ~---~~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~----------------- 266 (484)
. .....+|+.|+|||++.+. .++.++|||||||++|||++|+.||.+............
T Consensus 194 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~ 273 (394)
T 4e7w_A 194 AGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNY 273 (394)
T ss_dssp TTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGG
T ss_pred CCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhh
Confidence 3 2456789999999999765 489999999999999999999999876432111100000
Q ss_pred ------ccccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHH
Q 011519 267 ------TLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 267 ------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 310 (484)
..........++...++++.+|+.+||+.||.+|||+.++++|-
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp 323 (394)
T 4e7w_A 274 MEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHP 323 (394)
T ss_dssp SSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSG
T ss_pred hhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcCh
Confidence 00000000112334568999999999999999999999999983
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-43 Score=345.88 Aligned_cols=253 Identities=17% Similarity=0.190 Sum_probs=188.8
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCc-------
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDE------- 127 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~------- 127 (484)
+..|.+++.||+|+||+||+|+. .+++.||||++.... .....+.+++..+..++||||+++++++...+.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 100 (360)
T 3e3p_A 22 MDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIY 100 (360)
T ss_dssp HTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEE
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhcccccccccee
Confidence 45678888999999999999995 578999999986543 223467788889999999999999999976443
Q ss_pred eEEEEecCCCCCHHhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHhh--cCCCcccccccccceeecC-CCCceeeccCC
Q 011519 128 RLLVAEYMPNDTLAKHLFH--WETQPMKWAMRLRVALHIAEALEYCT--SKERALYHDLNAYRIVFDD-DVNPRLSCFGL 202 (484)
Q Consensus 128 ~~lv~Ey~~~gsL~~~l~~--~~~~~l~~~~~~~i~~qi~~~L~~lH--~~~~ivH~Dlkp~Nill~~-~~~~kl~DfG~ 202 (484)
.++||||+++ +|...+.. .....+++..+..++.||+.||.||| +. ||+||||||+|||++. ++.+||+|||+
T Consensus 101 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~-~ivH~Dlkp~NIll~~~~~~~kl~Dfg~ 178 (360)
T 3e3p_A 101 LNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV-NVCHRDIKPHNVLVNEADGTLKLCDFGS 178 (360)
T ss_dssp EEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT-CCBCSCCCGGGEEEETTTTEEEECCCTT
T ss_pred EEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC-CeecCcCCHHHEEEeCCCCcEEEeeCCC
Confidence 7899999976 55554432 24567899999999999999999999 88 9999999999999996 89999999999
Q ss_pred ccccCCC---CcccCCCCCCCcccccCCC-CCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcccccc----------
Q 011519 203 MKNSRDG---RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL---------- 268 (484)
Q Consensus 203 a~~~~~~---~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~---------- 268 (484)
++..... ....||+.|+|||++.+.. ++.++|||||||++|+|+||+.||................
T Consensus 179 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (360)
T 3e3p_A 179 AKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRK 258 (360)
T ss_dssp CBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHH
T ss_pred ceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHh
Confidence 9876543 3456899999999987654 8999999999999999999999887543221111110000
Q ss_pred ----------c------cccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 269 ----------T------DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 269 ----------~------~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
. -.......+...++.+.+|+.+||+.||.+|||+.++++|-+
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~ 317 (360)
T 3e3p_A 259 LNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPY 317 (360)
T ss_dssp HCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGG
T ss_pred cccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCcc
Confidence 0 000011122335789999999999999999999999999843
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-43 Score=369.56 Aligned_cols=251 Identities=20% Similarity=0.263 Sum_probs=205.4
Q ss_pred CcccccccCCCCCCceEEEEEeC----CCcEEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLE----NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 131 (484)
.+|++.+.||+|+||+||+|... .+..||||.++..... ..+.|.+|+.++++++||||+++++++. .+..++|
T Consensus 390 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~lv 468 (656)
T 2j0j_A 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWII 468 (656)
T ss_dssp GGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEE
T ss_pred ccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEEE
Confidence 46778888999999999999853 2467999998764433 2467999999999999999999999985 4678999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCC-
Q 011519 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR- 210 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~- 210 (484)
|||+++|+|.+++.. ....+++..++.++.||+.||.|||+. ||+||||||+|||++.++.+||+|||+++......
T Consensus 469 ~E~~~~g~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~-givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~ 546 (656)
T 2j0j_A 469 MELCTLGELRSFLQV-RKFSLDLASLILYAYQLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 546 (656)
T ss_dssp EECCTTCBHHHHHHH-TTTTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC---
T ss_pred EEcCCCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhC-CccccccchHhEEEeCCCCEEEEecCCCeecCCCcc
Confidence 999999999999964 344699999999999999999999999 99999999999999999999999999998765432
Q ss_pred ----cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHHH
Q 011519 211 ----SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 285 (484)
Q Consensus 211 ----~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 285 (484)
...+|+.|+|||++.+..++.++|||||||++|||++ |..||.............. ......+..+++.+
T Consensus 547 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~-----~~~~~~~~~~~~~l 621 (656)
T 2j0j_A 547 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN-----GERLPMPPNCPPTL 621 (656)
T ss_dssp -------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHH-----TCCCCCCTTCCHHH
T ss_pred eeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHc-----CCCCCCCccccHHH
Confidence 2345678999999998889999999999999999997 8877765432222111111 11122445667899
Q ss_pred HHHHHHHhccCCCCCCChHHHHHHHHhhhc
Q 011519 286 VRLASRCLQYEPRERPNPRSLVTALVTLQK 315 (484)
Q Consensus 286 ~~li~~cl~~dp~~Rps~~~il~~l~~~~~ 315 (484)
.+|+.+||..||.+|||+.++++.|..+..
T Consensus 622 ~~li~~~l~~dP~~RPs~~el~~~L~~il~ 651 (656)
T 2j0j_A 622 YSLMTKCWAYDPSRRPRFTELKAQLSTILE 651 (656)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 999999999999999999999999988754
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-43 Score=340.35 Aligned_cols=248 Identities=18% Similarity=0.233 Sum_probs=199.8
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCc--cHHHHHHHHHHHhcCC--CCceeeeeeeeeeCCceEEEE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLR--NRRLANLLGCCCEGDERLLVA 132 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~--hpniv~l~~~~~~~~~~~lv~ 132 (484)
..|.+++.||+|+||.||++...+++.||||++...... ..+.+.+|+.++.+++ ||||+++++++...+..++||
T Consensus 28 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 107 (313)
T 3cek_A 28 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 107 (313)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEE
T ss_pred ceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEE
Confidence 468889999999999999999878999999999754322 3567899999999997 599999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC---
Q 011519 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--- 209 (484)
Q Consensus 133 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~--- 209 (484)
| +.+++|.+++.. ...+++..++.++.||+.||.|||+. |++||||||+|||++ ++.+||+|||++......
T Consensus 108 e-~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~~~~~~~~ 182 (313)
T 3cek_A 108 E-CGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQH-GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS 182 (313)
T ss_dssp C-CCSEEHHHHHHH--CSSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEEE-TTEEEECCCSSSCC-------
T ss_pred e-cCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CceecCCCcccEEEE-CCeEEEeeccccccccCcccc
Confidence 9 558899999974 45789999999999999999999999 999999999999996 489999999999865432
Q ss_pred ---CcccCCCCCCCcccccC-----------CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccC
Q 011519 210 ---RSYSTNLAFTPPEYLRT-----------GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEG 275 (484)
Q Consensus 210 ---~~~~~t~~y~aPE~~~~-----------~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 275 (484)
....||+.|+|||++.+ ..++.++||||||+++|+|++|..||......... ...........
T Consensus 183 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~---~~~~~~~~~~~ 259 (313)
T 3cek_A 183 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK---LHAIIDPNHEI 259 (313)
T ss_dssp -------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHH---HHHHHCTTSCC
T ss_pred ccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHH---HHHHHhccccc
Confidence 23468999999999875 46788999999999999999999988643211111 11111222222
Q ss_pred CCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHh
Q 011519 276 QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVT 312 (484)
Q Consensus 276 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~ 312 (484)
.++...+..+.+|+.+||+.||.+|||+.+++++.+-
T Consensus 260 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~ 296 (313)
T 3cek_A 260 EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV 296 (313)
T ss_dssp CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHH
T ss_pred CCcccchHHHHHHHHHHccCCcccCcCHHHHhcCccc
Confidence 3344456789999999999999999999999998654
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-43 Score=335.51 Aligned_cols=249 Identities=18% Similarity=0.176 Sum_probs=202.8
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCC--CccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEe
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 133 (484)
.+|++++.||+|+||+||+|.. .+++.||||++.... ....+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 22 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 101 (287)
T 2wei_A 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE 101 (287)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEE
Confidence 4688899999999999999995 478999999986543 2346789999999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCC---CCceeeccCCccccCCC-
Q 011519 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD---VNPRLSCFGLMKNSRDG- 209 (484)
Q Consensus 134 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~---~~~kl~DfG~a~~~~~~- 209 (484)
|+++++|.+++.. ...+++..++.++.||+.||.|||+. |++|+||||+||+++.+ +.+||+|||++......
T Consensus 102 ~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~-~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~ 178 (287)
T 2wei_A 102 LYTGGELFDEIIK--RKRFSEHDAARIIKQVFSGITYMHKH-NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT 178 (287)
T ss_dssp CCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCS
T ss_pred ccCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeccCCChhhEEEecCCCcccEEEeccCcceeecCCC
Confidence 9999999998863 34699999999999999999999999 99999999999999754 46999999998865543
Q ss_pred --CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHH
Q 011519 210 --RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287 (484)
Q Consensus 210 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (484)
....+|+.|+|||.+.+ .++.++||||||+++|+|++|..||................... ........+..+.+
T Consensus 179 ~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 255 (287)
T 2wei_A 179 KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAF--DLPQWRTISDDAKD 255 (287)
T ss_dssp SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC--CSGGGTTSCHHHHH
T ss_pred ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC--CchhhhhcCHHHHH
Confidence 23457889999999875 58999999999999999999999887543222211111110000 00011234678999
Q ss_pred HHHHHhccCCCCCCChHHHHHHHH
Q 011519 288 LASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 288 li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
|+.+||..||.+|||+.+++++-+
T Consensus 256 li~~~l~~dp~~Rps~~ell~hp~ 279 (287)
T 2wei_A 256 LIRKMLTFHPSLRITATQCLEHPW 279 (287)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHSHH
T ss_pred HHHHHcccChhhCcCHHHHhcCHH
Confidence 999999999999999999999743
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-43 Score=349.86 Aligned_cols=252 Identities=14% Similarity=0.203 Sum_probs=184.0
Q ss_pred cccccc-cCCCCCCceEEEEEeC---CCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeee--CCceEEE
Q 011519 58 MENIVS-EHGEKAPNVVYKGKLE---NQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE--GDERLLV 131 (484)
Q Consensus 58 ~~~~~~-~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~--~~~~~lv 131 (484)
.|++.+ +||+|+||+||+|... +++.||||++.... ....+.+|+.+|+.++||||+++++++.. ....+||
T Consensus 21 ~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv 98 (405)
T 3rgf_A 21 LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLL 98 (405)
T ss_dssp HEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEE
T ss_pred hhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEE
Confidence 355544 6999999999999954 57889999997543 34578899999999999999999999954 6789999
Q ss_pred EecCCCCCHHhhhccC-------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceee----cCCCCceeecc
Q 011519 132 AEYMPNDTLAKHLFHW-------ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF----DDDVNPRLSCF 200 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~-------~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill----~~~~~~kl~Df 200 (484)
|||+.+ +|.+++... ....+++..++.|+.||+.||.|||+. ||+||||||+|||+ +.++.+||+||
T Consensus 99 ~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~-~ivH~Dlkp~NIll~~~~~~~~~~kl~Df 176 (405)
T 3rgf_A 99 FDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN-WVLHRDLKPANILVMGEGPERGRVKIADM 176 (405)
T ss_dssp EECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECCSSTTTTCEEECCT
T ss_pred EeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC-CEeCCCcCHHHeEEecCCCCCCcEEEEEC
Confidence 999965 888887521 223599999999999999999999999 99999999999999 67789999999
Q ss_pred CCccccCCC-------CcccCCCCCCCcccccCC-CCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhh---------c
Q 011519 201 GLMKNSRDG-------RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD---------R 263 (484)
Q Consensus 201 G~a~~~~~~-------~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~---------~ 263 (484)
|+++..... ....||+.|+|||++.+. .++.++|||||||++|+|+||..||.....+.... .
T Consensus 177 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~ 256 (405)
T 3rgf_A 177 GFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDR 256 (405)
T ss_dssp TCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHH
T ss_pred CCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHH
Confidence 999865432 345789999999999874 48999999999999999999999886432110000 0
Q ss_pred c-----------cccc-------------ccccccC--------CCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 264 N-----------IQTL-------------TDSCLEG--------QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 264 ~-----------~~~~-------------~~~~~~~--------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
. ...+ ....... ......+..+.+||.+||..||.+|||+.++++|-+
T Consensus 257 i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~ 336 (405)
T 3rgf_A 257 IFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPY 336 (405)
T ss_dssp HHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred HHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChh
Confidence 0 0000 0000000 000111567899999999999999999999999965
Q ss_pred hh
Q 011519 312 TL 313 (484)
Q Consensus 312 ~~ 313 (484)
-.
T Consensus 337 f~ 338 (405)
T 3rgf_A 337 FL 338 (405)
T ss_dssp GT
T ss_pred hc
Confidence 43
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-42 Score=341.66 Aligned_cols=249 Identities=16% Similarity=0.201 Sum_probs=197.9
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCcc--HHHHHHHHHHHhcCCCCceeeeeeeeeeCCc------
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLGCCCEGDE------ 127 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~------ 127 (484)
..|.+.+.||+|+||+||+|.. .+|+.||||++....... .+.+.+|+.+++.++||||+++++++...+.
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 4678888899999999999995 578999999997643322 4678999999999999999999999987654
Q ss_pred eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccC
Q 011519 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 207 (484)
Q Consensus 128 ~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~ 207 (484)
.++||||+. |+|.+++. ..+++..+..++.||+.||.|||+. |++||||||+|||++.++.+||+|||+++...
T Consensus 104 ~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~al~~LH~~-~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 177 (353)
T 3coi_A 104 FYLVMPFMQ-TDLQKIMG----LKFSEEKIQYLVYQMLKGLKYIHSA-GVVHRDLKPGNLAVNEDCELKILDFGLARHAD 177 (353)
T ss_dssp CEEEEECCS-EEGGGTTT----SCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSSCCGGGEEECTTCCEEECSTTCTTC--
T ss_pred EEEEecccc-CCHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEeECCCCcEEEeecccccCCC
Confidence 499999997 58988873 3499999999999999999999999 99999999999999999999999999998754
Q ss_pred CC-CcccCCCCCCCcccccC-CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccc--------------------
Q 011519 208 DG-RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI-------------------- 265 (484)
Q Consensus 208 ~~-~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~-------------------- 265 (484)
.. ....+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.............
T Consensus 178 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 257 (353)
T 3coi_A 178 AEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAK 257 (353)
T ss_dssp ------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHH
T ss_pred CCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHH
Confidence 43 34578999999999887 568999999999999999999999886532211100000
Q ss_pred ---cccccc--cccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 266 ---QTLTDS--CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 266 ---~~~~~~--~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
..+... ..........++.+.+|+.+||..||++|||+.++++|-+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~ 308 (353)
T 3coi_A 258 SYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPF 308 (353)
T ss_dssp HHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGG
T ss_pred HHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcc
Confidence 000000 0001223456789999999999999999999999998844
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-42 Score=345.80 Aligned_cols=254 Identities=17% Similarity=0.158 Sum_probs=201.5
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCccHHHHHHHHHHHhcCC-CC-----ceeeeeeeeeeCCce
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NR-----RLANLLGCCCEGDER 128 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-hp-----niv~l~~~~~~~~~~ 128 (484)
..+|++++.||+|+||+||+|.. .+++.||||+++... .....+..|+.++..++ |+ +|+++++++...+..
T Consensus 53 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 131 (382)
T 2vx3_A 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHL 131 (382)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEE
T ss_pred eeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCce
Confidence 35788889999999999999994 578899999997432 23456788999988885 55 499999999999999
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhc-CCCcccccccccceeec--CCCCceeeccCCccc
Q 011519 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTS-KERALYHDLNAYRIVFD--DDVNPRLSCFGLMKN 205 (484)
Q Consensus 129 ~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~-~~~ivH~Dlkp~Nill~--~~~~~kl~DfG~a~~ 205 (484)
+|||||++ |+|.+++.......+++..+..++.||+.||.|||+ ..|||||||||+|||++ .++.+||+|||+++.
T Consensus 132 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~ 210 (382)
T 2vx3_A 132 CLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQ 210 (382)
T ss_dssp EEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTTCEE
T ss_pred EEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccCcee
Confidence 99999996 599999976555679999999999999999999995 23999999999999995 478899999999987
Q ss_pred cCCC-CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccc-------------------
Q 011519 206 SRDG-RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI------------------- 265 (484)
Q Consensus 206 ~~~~-~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~------------------- 265 (484)
.... ....||+.|+|||++.+..++.++|||||||++|||+||+.||.............
T Consensus 211 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 290 (382)
T 2vx3_A 211 LGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARK 290 (382)
T ss_dssp TTCCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTCTTHHH
T ss_pred cccccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhHHHHH
Confidence 6543 45678999999999999899999999999999999999999987542211110000
Q ss_pred --cccccccc-------------------------------------cCCCChHHHHHHHHHHHHHhccCCCCCCChHHH
Q 011519 266 --QTLTDSCL-------------------------------------EGQFSSDEGTELVRLASRCLQYEPRERPNPRSL 306 (484)
Q Consensus 266 --~~~~~~~~-------------------------------------~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i 306 (484)
..+.+... .........+.+.+||.+||+.||++|||+.++
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta~e~ 370 (382)
T 2vx3_A 291 FFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYA 370 (382)
T ss_dssp HEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCHHHH
T ss_pred HHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChhhCCCHHHH
Confidence 00000000 000112234689999999999999999999999
Q ss_pred HHHHH
Q 011519 307 VTALV 311 (484)
Q Consensus 307 l~~l~ 311 (484)
++|-+
T Consensus 371 L~hp~ 375 (382)
T 2vx3_A 371 LQHSF 375 (382)
T ss_dssp TTSGG
T ss_pred hcCcc
Confidence 98843
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-43 Score=348.57 Aligned_cols=253 Identities=15% Similarity=0.208 Sum_probs=203.2
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCccHHHHHHHHHHHhcCC-----------CCceeeeeeeeee
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-----------NRRLANLLGCCCE 124 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------hpniv~l~~~~~~ 124 (484)
.+|.+++.||+|+||+||+|.. .+++.||||++.... ...+.+.+|+.++.+++ ||||+++++++..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~ 97 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH 97 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence 5788999999999999999994 678999999997532 23466889999999886 8999999999986
Q ss_pred CC----ceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeec------CCCC
Q 011519 125 GD----ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD------DDVN 194 (484)
Q Consensus 125 ~~----~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~------~~~~ 194 (484)
.+ ..++||||+ +++|.+++.......+++..+..++.||+.||.|||++.||+||||||+|||++ ..+.
T Consensus 98 ~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~ 176 (373)
T 1q8y_A 98 KGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQ 176 (373)
T ss_dssp EETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEE
T ss_pred cCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcce
Confidence 54 789999999 889999998666667999999999999999999999954899999999999994 4457
Q ss_pred ceeeccCCccccCCC-CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhh------hcc---
Q 011519 195 PRLSCFGLMKNSRDG-RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIR------DRN--- 264 (484)
Q Consensus 195 ~kl~DfG~a~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~------~~~--- 264 (484)
+||+|||++...... ....||+.|+|||++.+..++.++|||||||++|||+||..||......... ...
T Consensus 177 ~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 256 (373)
T 1q8y_A 177 IKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIEL 256 (373)
T ss_dssp EEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHH
T ss_pred EEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHh
Confidence 999999999876543 4567899999999999988999999999999999999999988643211000 000
Q ss_pred ------------------------cccccc-------c--cccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 265 ------------------------IQTLTD-------S--CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 265 ------------------------~~~~~~-------~--~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
...+.. . .....++...+..+.+||.+||+.||.+|||+.++++|-+
T Consensus 257 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 336 (373)
T 1q8y_A 257 LGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPW 336 (373)
T ss_dssp HCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGG
T ss_pred cCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhChh
Confidence 000000 0 0012355678899999999999999999999999999854
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-42 Score=340.38 Aligned_cols=252 Identities=15% Similarity=0.139 Sum_probs=202.6
Q ss_pred CcccccccCCCCCCceEEEEEe-CCC-cEEEEEEecCCCCccHHHHHHHHHHHhcCCCCc------eeeeeeeeeeCCce
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQ-FRIAVKRFNRSAWPDARQFLEEARAVGQLRNRR------LANLLGCCCEGDER 128 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpn------iv~l~~~~~~~~~~ 128 (484)
.+|++++.||+|+||+||+|.. .++ +.||||+++... ...+.+.+|+.+++.++|++ ++.+++++...+..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 97 (355)
T 2eu9_A 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHM 97 (355)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEE
T ss_pred ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeE
Confidence 5788999999999999999995 344 789999997532 33567889999999997765 99999999999999
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceee-------------------
Q 011519 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF------------------- 189 (484)
Q Consensus 129 ~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill------------------- 189 (484)
++||||+ +++|.+++.......+++..++.++.||+.||.|||+. ||+||||||+|||+
T Consensus 98 ~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~-~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~ 175 (355)
T 2eu9_A 98 CIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHEN-QLTHTDLKPENILFVNSEFETLYNEHKSCEEKS 175 (355)
T ss_dssp EEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCCGGGEEESCCCEEEEECCC-CCCEEE
T ss_pred EEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC-CcccCCCCHHHEEEecccccccccccccccccc
Confidence 9999999 66788888665556799999999999999999999999 99999999999999
Q ss_pred cCCCCceeeccCCccccCCC-CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhc---cc
Q 011519 190 DDDVNPRLSCFGLMKNSRDG-RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR---NI 265 (484)
Q Consensus 190 ~~~~~~kl~DfG~a~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~---~~ 265 (484)
+.++.+||+|||+++..... ....||+.|+|||++.+..++.++|||||||++|||+||..||........... ..
T Consensus 176 ~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 255 (355)
T 2eu9_A 176 VKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKIL 255 (355)
T ss_dssp ESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH
T ss_pred cCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHc
Confidence 56789999999999875443 456789999999999988999999999999999999999999875422111000 00
Q ss_pred ccccc----------------------------------c-cccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHH
Q 011519 266 QTLTD----------------------------------S-CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 266 ~~~~~----------------------------------~-~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 310 (484)
...+. . ..........+..+.+|+.+||+.||.+|||+.++++|-
T Consensus 256 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp 335 (355)
T 2eu9_A 256 GPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHP 335 (355)
T ss_dssp CCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSG
T ss_pred CCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcCh
Confidence 00000 0 000012234567899999999999999999999999884
Q ss_pred H
Q 011519 311 V 311 (484)
Q Consensus 311 ~ 311 (484)
+
T Consensus 336 ~ 336 (355)
T 2eu9_A 336 F 336 (355)
T ss_dssp G
T ss_pred h
Confidence 3
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-43 Score=340.48 Aligned_cols=240 Identities=20% Similarity=0.287 Sum_probs=196.1
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCc------cHHHHHHHHHHHhcC----CCCceeeeeeeeeeC
Q 011519 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP------DARQFLEEARAVGQL----RNRRLANLLGCCCEG 125 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l----~hpniv~l~~~~~~~ 125 (484)
.+|++++.||+|+||.||+|. ..+++.||||++...... ....+.+|+.++.++ +||||+++++++...
T Consensus 31 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~ 110 (312)
T 2iwi_A 31 AEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQ 110 (312)
T ss_dssp --CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC---
T ss_pred hceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecC
Confidence 467888899999999999999 467899999999765432 123466799999988 899999999999999
Q ss_pred CceEEEEec-CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeec-CCCCceeeccCCc
Q 011519 126 DERLLVAEY-MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD-DDVNPRLSCFGLM 203 (484)
Q Consensus 126 ~~~~lv~Ey-~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~-~~~~~kl~DfG~a 203 (484)
+..++|||| +.+++|.+++.. .+.+++..++.++.||+.||.|||+. |++||||||+||+++ .++.+||+|||++
T Consensus 111 ~~~~~v~e~~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~~kl~dfg~~ 187 (312)
T 2iwi_A 111 EGFMLVLERPLPAQDLFDYITE--KGPLGEGPSRCFFGQVVAAIQHCHSR-GVVHRDIKDENILIDLRRGCAKLIDFGSG 187 (312)
T ss_dssp --CEEEEECCSSEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHH-TEECCCCSGGGEEEETTTTEEEECCCSSC
T ss_pred CeEEEEEEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecCCChhhEEEeCCCCeEEEEEcchh
Confidence 999999999 789999999973 45699999999999999999999999 999999999999999 8899999999999
Q ss_pred cccCCC--CcccCCCCCCCcccccCCCC-CCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChH
Q 011519 204 KNSRDG--RSYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD 280 (484)
Q Consensus 204 ~~~~~~--~~~~~t~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (484)
...... ....||+.|+|||++.+..+ +.++||||||+++|+|++|+.||..... .... ...++..
T Consensus 188 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~----------~~~~~~~ 255 (312)
T 2iwi_A 188 ALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE--ILEA----------ELHFPAH 255 (312)
T ss_dssp EECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH--HHHT----------CCCCCTT
T ss_pred hhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH--Hhhh----------ccCCccc
Confidence 876543 34568999999999887665 4589999999999999999988765321 1111 1123455
Q ss_pred HHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 281 EGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 281 ~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
.+..+.+|+.+||+.||++|||+.+++++.+
T Consensus 256 ~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~ 286 (312)
T 2iwi_A 256 VSPDCCALIRRCLAPKPSSRPSLEEILLDPW 286 (312)
T ss_dssp SCHHHHHHHHHHTCSSTTTSCCHHHHHHSTT
T ss_pred CCHHHHHHHHHHccCChhhCcCHHHHhcChh
Confidence 6688999999999999999999999999854
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-43 Score=341.26 Aligned_cols=242 Identities=18% Similarity=0.254 Sum_probs=202.7
Q ss_pred CCCcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCc------cHHHHHHHHHHHhcCC--CCceeeeeeeeeeC
Q 011519 55 GFAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP------DARQFLEEARAVGQLR--NRRLANLLGCCCEG 125 (484)
Q Consensus 55 ~f~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~--hpniv~l~~~~~~~ 125 (484)
-..+|.+++.||+|+||+||+|. ..+++.||||++...... ....+.+|+.++++++ ||||+++++++...
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~ 120 (320)
T 3a99_A 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 120 (320)
T ss_dssp CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence 34578899999999999999999 567899999999654322 1245778999999996 59999999999999
Q ss_pred CceEEEEecCCC-CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeec-CCCCceeeccCCc
Q 011519 126 DERLLVAEYMPN-DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD-DDVNPRLSCFGLM 203 (484)
Q Consensus 126 ~~~~lv~Ey~~~-gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~-~~~~~kl~DfG~a 203 (484)
+..++||||+.+ ++|.+++.. .+.+++..++.++.||+.||.|||+. ||+||||||+|||++ +++.+||+|||++
T Consensus 121 ~~~~lv~e~~~~~~~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~~LH~~-~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~ 197 (320)
T 3a99_A 121 DSFVLILERPEPVQDLFDFITE--RGALQEELARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG 197 (320)
T ss_dssp SEEEEEEECCSSEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEETTTTEEEECCCTTC
T ss_pred CcEEEEEEcCCCCccHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHC-CcEeCCCCHHHEEEeCCCCCEEEeeCccc
Confidence 999999999976 899999973 45799999999999999999999999 999999999999999 7899999999999
Q ss_pred cccCCC--CcccCCCCCCCcccccCCCC-CCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChH
Q 011519 204 KNSRDG--RSYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD 280 (484)
Q Consensus 204 ~~~~~~--~~~~~t~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (484)
...... ....||+.|+|||++.+..+ +.++||||||+++|||+||+.||..... ..... ..++..
T Consensus 198 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~--~~~~~----------~~~~~~ 265 (320)
T 3a99_A 198 ALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE--IIRGQ----------VFFRQR 265 (320)
T ss_dssp EECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH--HHHCC----------CCCSSC
T ss_pred cccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh--hhccc----------cccccc
Confidence 876543 34578999999999987665 6789999999999999999988865421 11110 012334
Q ss_pred HHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 281 EGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 281 ~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
.++.+.+|+.+||+.||.+|||+.+++++.+
T Consensus 266 ~~~~~~~li~~~l~~dp~~Rps~~~ll~hp~ 296 (320)
T 3a99_A 266 VSSECQHLIRWCLALRPSDRPTFEEIQNHPW 296 (320)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHTSGG
T ss_pred CCHHHHHHHHHHccCChhhCcCHHHHhcCHh
Confidence 5678999999999999999999999998743
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-42 Score=360.22 Aligned_cols=252 Identities=18% Similarity=0.194 Sum_probs=198.4
Q ss_pred CCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCceeeeeeeeee------CC
Q 011519 55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCE------GD 126 (484)
Q Consensus 55 ~f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~------~~ 126 (484)
.+.+|++++.||.|+||+||+|.. .+|+.||||+++..... ..+.+.+|+.++++++||||+++++++.. .+
T Consensus 12 ~~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~ 91 (676)
T 3qa8_A 12 TCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPND 91 (676)
T ss_dssp -----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTS
T ss_pred CCCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCC
Confidence 356789999999999999999994 57899999999765322 35679999999999999999999998765 66
Q ss_pred ceEEEEecCCCCCHHhhhccCC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCC---ceeeccCC
Q 011519 127 ERLLVAEYMPNDTLAKHLFHWE-TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN---PRLSCFGL 202 (484)
Q Consensus 127 ~~~lv~Ey~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~---~kl~DfG~ 202 (484)
..++||||++||+|.+++.... ...+++..++.++.||+.||.|||+. ||+||||||+|||++.++. +||+|||+
T Consensus 92 ~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~-gIVHrDLKP~NILl~~~g~~~~vKL~DFG~ 170 (676)
T 3qa8_A 92 LPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN-RIIHRDLKPENIVLQPGPQRLIHKIIDLGY 170 (676)
T ss_dssp SCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT-TBCCCCCCSTTEEEECCSSSCEEEECSCCC
T ss_pred eEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC-CCccCCCCHHHeEeecCCCceeEEEccccc
Confidence 7899999999999999997532 23689999999999999999999998 9999999999999997765 89999999
Q ss_pred ccccCCC---CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhh--------------ccc
Q 011519 203 MKNSRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRD--------------RNI 265 (484)
Q Consensus 203 a~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~--------------~~~ 265 (484)
+...... ....||+.|+|||++.+..++.++||||||+++|+|+||..||.......... ...
T Consensus 171 a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l 250 (676)
T 3qa8_A 171 AKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDL 250 (676)
T ss_dssp CCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCC
T ss_pred ccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhh
Confidence 9876543 34578999999999998899999999999999999999999886432111000 000
Q ss_pred cccc----cccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHH
Q 011519 266 QTLT----DSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLV 307 (484)
Q Consensus 266 ~~~~----~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il 307 (484)
.... ........+...++.+.+|+..||..||.+|||+.+++
T Consensus 251 ~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL 296 (676)
T 3qa8_A 251 TGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNP 296 (676)
T ss_dssp SSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCC
T ss_pred ccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHh
Confidence 0000 00011234566889999999999999999999998744
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-42 Score=326.36 Aligned_cols=232 Identities=13% Similarity=0.106 Sum_probs=185.7
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCcc---HHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPD---ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 132 (484)
..|++++.||+|+||.||+|.. .+++.||||++....... .+.|.+|+.++.+++||||+++++++...+..|+||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 4688889999999999999995 458999999998654332 467999999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCCcc
Q 011519 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY 212 (484)
Q Consensus 133 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 212 (484)
||++|++|.+++.. + ....++..|+.||+.||.|||+. ||+||||||+|||++.++.+||+++|
T Consensus 111 e~~~g~~L~~~l~~---~-~~~~~~~~i~~ql~~aL~~lH~~-givH~Dikp~NIll~~~g~~kl~~~~----------- 174 (286)
T 3uqc_A 111 EWIRGGSLQEVADT---S-PSPVGAIRAMQSLAAAADAAHRA-GVALSIDHPSRVRVSIDGDVVLAYPA----------- 174 (286)
T ss_dssp ECCCEEEHHHHHTT---C-CCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSGGGEEEETTSCEEECSCC-----------
T ss_pred EecCCCCHHHHHhc---C-CChHHHHHHHHHHHHHHHHHHHC-CCccCCCCcccEEEcCCCCEEEEecc-----------
Confidence 99999999999942 2 35667899999999999999999 99999999999999999999998553
Q ss_pred cCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcccccccccc-ccCCCChHHHHHHHHHHHH
Q 011519 213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSC-LEGQFSSDEGTELVRLASR 291 (484)
Q Consensus 213 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~ 291 (484)
|++ .++.++|||||||++|+|+||+.||.................... ........+++.+.+|+.+
T Consensus 175 -----~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 242 (286)
T 3uqc_A 175 -----TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAAR 242 (286)
T ss_dssp -----CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHHHHHH
T ss_pred -----ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHHHHHHHH
Confidence 333 368899999999999999999998875422110000000000000 0001223456889999999
Q ss_pred HhccCCCCCCChHHHHHHHHhhhcCC
Q 011519 292 CLQYEPRERPNPRSLVTALVTLQKDT 317 (484)
Q Consensus 292 cl~~dp~~Rps~~~il~~l~~~~~~~ 317 (484)
||+.||++| |+.++++.|+.+....
T Consensus 243 ~l~~dP~~R-s~~el~~~L~~~~~~~ 267 (286)
T 3uqc_A 243 SVQGDGGIR-SASTLLNLMQQATAVA 267 (286)
T ss_dssp HHCTTSSCC-CHHHHHHHHHHHHC--
T ss_pred HcccCCccC-CHHHHHHHHHHHhccC
Confidence 999999999 9999999999987653
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-42 Score=332.40 Aligned_cols=251 Identities=18% Similarity=0.241 Sum_probs=183.5
Q ss_pred CCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCcc-HHH-HHHHHHHHhcCCCCceeeeeeeeeeCCceEEE
Q 011519 55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPD-ARQ-FLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (484)
Q Consensus 55 ~f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~~~-~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 131 (484)
.+.+|++++.||+|+||+||+|.. .+++.||||++....... ..+ +..+..+++.++||||+++++++...+..++|
T Consensus 23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv 102 (318)
T 2dyl_A 23 EINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIA 102 (318)
T ss_dssp CGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEE
Confidence 356788899999999999999995 578999999997654332 223 44555578888999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC--
Q 011519 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 209 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~-- 209 (484)
|||+ ++.+..+... ....+++..++.++.||+.||.|||++.|++|+||||+|||++.++.+||+|||++......
T Consensus 103 ~e~~-~~~~~~l~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~ 180 (318)
T 2dyl_A 103 MELM-GTCAEKLKKR-MQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKA 180 (318)
T ss_dssp ECCC-SEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred Eecc-CCcHHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCcc
Confidence 9999 5566655532 34679999999999999999999998338999999999999999999999999998765432
Q ss_pred -CcccCCCCCCCccccc-----CCCCCCCCceeehHHHHHHHhhCCCCCCchhhHH-hhhccccccccccccCCCChHHH
Q 011519 210 -RSYSTNLAFTPPEYLR-----TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDL-IRDRNIQTLTDSCLEGQFSSDEG 282 (484)
Q Consensus 210 -~~~~~t~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 282 (484)
....+|+.|+|||++. +..++.++||||||+++|+|++|+.||....... .......... ... ......+
T Consensus 181 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~ 257 (318)
T 2dyl_A 181 KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEP-PLL--PGHMGFS 257 (318)
T ss_dssp ------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCC-CCC--CSSSCCC
T ss_pred ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCC-CCC--CccCCCC
Confidence 3456899999999995 4568899999999999999999998886421111 1111111100 000 1112356
Q ss_pred HHHHHHHHHHhccCCCCCCChHHHHHHH
Q 011519 283 TELVRLASRCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 283 ~~l~~li~~cl~~dp~~Rps~~~il~~l 310 (484)
+.+.+|+.+||+.||.+|||+.+++++-
T Consensus 258 ~~l~~li~~~l~~dp~~Rps~~~ll~h~ 285 (318)
T 2dyl_A 258 GDFQSFVKDCLTKDHRKRPKYNKLLEHS 285 (318)
T ss_dssp HHHHHHHHHHTCSCTTTSCCHHHHTTSH
T ss_pred HHHHHHHHHHccCChhHCcCHHHHhhCH
Confidence 7899999999999999999999999874
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-42 Score=346.00 Aligned_cols=243 Identities=18% Similarity=0.135 Sum_probs=186.4
Q ss_pred ccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhcC-CCCceeeeeeeeeeCCceEEEEecCCCCC
Q 011519 61 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMPNDT 139 (484)
Q Consensus 61 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~Ey~~~gs 139 (484)
+.+.||+|+||+||.+...+|+.||||++... ..+.+.+|+.++.++ +|||||++++++.+.+..+|||||+. |+
T Consensus 19 ~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gs 94 (434)
T 2rio_A 19 SEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LN 94 (434)
T ss_dssp EEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EE
T ss_pred ccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CC
Confidence 34668999999998777778999999998643 345688999999876 89999999999999999999999995 69
Q ss_pred HHhhhccCCCCC-----CCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCC-------------CCceeeccC
Q 011519 140 LAKHLFHWETQP-----MKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD-------------VNPRLSCFG 201 (484)
Q Consensus 140 L~~~l~~~~~~~-----l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~-------------~~~kl~DfG 201 (484)
|.+++....... .++..++.++.||+.||.|||+. ||+||||||+|||++.+ +.+||+|||
T Consensus 95 L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG 173 (434)
T 2rio_A 95 LQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL-KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 173 (434)
T ss_dssp HHHHHHTC------------CCHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCT
T ss_pred HHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC-CccccCCChHhEEEecCcccccccccCCCceEEEEcccc
Confidence 999997432211 13334678999999999999999 99999999999999754 479999999
Q ss_pred CccccCCC--------CcccCCCCCCCcccccC-------CCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccc
Q 011519 202 LMKNSRDG--------RSYSTNLAFTPPEYLRT-------GRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNI 265 (484)
Q Consensus 202 ~a~~~~~~--------~~~~~t~~y~aPE~~~~-------~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~ 265 (484)
+++..... ....||+.|+|||++.+ ..++.++|||||||++|||+| |..||......... ..
T Consensus 174 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~--i~ 251 (434)
T 2rio_A 174 LCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESN--II 251 (434)
T ss_dssp TCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHHH--HH
T ss_pred cceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHHH--Hh
Confidence 99876543 23468999999999975 568999999999999999999 88777543221110 00
Q ss_pred ccccc-ccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHH
Q 011519 266 QTLTD-SCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 266 ~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 310 (484)
..... .......+...++++.+|+.+||+.||.+|||+.++++|.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp 297 (434)
T 2rio_A 252 RGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHP 297 (434)
T ss_dssp HTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSG
T ss_pred cCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhCC
Confidence 00000 1111122456788999999999999999999999999874
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-41 Score=343.55 Aligned_cols=243 Identities=14% Similarity=0.117 Sum_probs=187.8
Q ss_pred cccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhcC-CCCceeeeeeeeeeCCceEEEEecCC
Q 011519 58 MENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLVAEYMP 136 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv~Ey~~ 136 (484)
.|.+.+.||+|+||+||.....+++.||||++...... .+.+|+.+|+.+ +|||||++++++.+....+|||||+.
T Consensus 25 ~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~---~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~ 101 (432)
T 3p23_A 25 SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS---FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA 101 (432)
T ss_dssp EEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEE---ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred EEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHH---HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC
Confidence 46677788999999977655668899999999764432 356899999999 79999999999999999999999996
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecC-----CCCceeeccCCccccCCC--
Q 011519 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-----DVNPRLSCFGLMKNSRDG-- 209 (484)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~-----~~~~kl~DfG~a~~~~~~-- 209 (484)
|+|.+++... ...+++..++.++.||+.||.|||+. ||+||||||+|||++. ...+||+|||+++.....
T Consensus 102 -g~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~ 178 (432)
T 3p23_A 102 -ATLQEYVEQK-DFAHLGLEPITLLQQTTSGLAHLHSL-NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRH 178 (432)
T ss_dssp -EEHHHHHHSS-SCCCCSSCHHHHHHHHHHHHHHHHHT-TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-----
T ss_pred -CCHHHHHHhc-CCCccchhHHHHHHHHHHHHHHHHHC-cCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCc
Confidence 5999999743 33455666789999999999999999 9999999999999953 235789999999875432
Q ss_pred -----CcccCCCCCCCcccccC---CCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChH
Q 011519 210 -----RSYSTNLAFTPPEYLRT---GRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD 280 (484)
Q Consensus 210 -----~~~~~t~~y~aPE~~~~---~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (484)
....||+.|+|||++.+ ..++.++|||||||++|||+| |..||........... ....... .......
T Consensus 179 ~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~-~~~~~~~--~~~~~~~ 255 (432)
T 3p23_A 179 SFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANIL-LGACSLD--CLHPEKH 255 (432)
T ss_dssp -------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHH-TTCCCCT--TSCTTCH
T ss_pred ceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHH-hccCCcc--ccCcccc
Confidence 34568999999999984 557889999999999999999 7766643322211110 1000000 0112344
Q ss_pred HHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 281 EGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 281 ~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
.+..+.+||.+||+.||.+|||+.++++|
T Consensus 256 ~~~~~~~li~~~L~~dP~~Rps~~evl~h 284 (432)
T 3p23_A 256 EDVIARELIEKMIAMDPQKRPSAKHVLKH 284 (432)
T ss_dssp HHHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ccHHHHHHHHHHHhCCHhhCCCHHHHHhC
Confidence 56778999999999999999999999977
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-41 Score=322.85 Aligned_cols=230 Identities=16% Similarity=0.139 Sum_probs=184.8
Q ss_pred Cccccc-ccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCccHHHHHHHHHHH-hcCCCCceeeeeeeeee----CCceE
Q 011519 57 AMENIV-SEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAV-GQLRNRRLANLLGCCCE----GDERL 129 (484)
Q Consensus 57 ~~~~~~-~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~hpniv~l~~~~~~----~~~~~ 129 (484)
..|.++ +.||+|+||.||+|.. .+++.||||+++. ...+.+|+.++ +.++||||+++++++.. ....+
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 91 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 91 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence 456777 5689999999999994 6789999999963 34678899988 55689999999999877 67789
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecC---CCCceeeccCCcccc
Q 011519 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD---DVNPRLSCFGLMKNS 206 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~---~~~~kl~DfG~a~~~ 206 (484)
+||||+++|+|.+++.......+++..++.++.||+.||.|||+. |++||||||+|||++. ++.+||+|||++...
T Consensus 92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 170 (299)
T 3m2w_A 92 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI-NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET 170 (299)
T ss_dssp EEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred EEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCCCHHHEEEecCCCCCcEEEecccccccc
Confidence 999999999999999865566799999999999999999999999 9999999999999997 788999999998643
Q ss_pred CCCCcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCC----hHHH
Q 011519 207 RDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFS----SDEG 282 (484)
Q Consensus 207 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 282 (484)
. +..++.++|||||||++|+|+||..||...............+.... ..++ ...+
T Consensus 171 ~------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 230 (299)
T 3m2w_A 171 T------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ--YEFPNPEWSEVS 230 (299)
T ss_dssp T------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTC--CSSCHHHHTTSC
T ss_pred c------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhcc--ccCCchhcccCC
Confidence 3 24578899999999999999999998865432222111111111110 1122 2357
Q ss_pred HHHHHHHHHHhccCCCCCCChHHHHHHHHh
Q 011519 283 TELVRLASRCLQYEPRERPNPRSLVTALVT 312 (484)
Q Consensus 283 ~~l~~li~~cl~~dp~~Rps~~~il~~l~~ 312 (484)
+++.+|+.+||+.||.+|||+.++++|.+-
T Consensus 231 ~~~~~li~~~l~~dP~~Rps~~e~l~hp~~ 260 (299)
T 3m2w_A 231 EEVKMLIRNLLKTEPTQRMTITEFMNHPWI 260 (299)
T ss_dssp HHHHHHHHHHTCSSTTTSCCHHHHHTSHHH
T ss_pred HHHHHHHHHHcccChhhCCCHHHHhcChhh
Confidence 889999999999999999999999998654
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-41 Score=331.83 Aligned_cols=242 Identities=12% Similarity=0.069 Sum_probs=186.9
Q ss_pred CCcccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCC--------ccHHHHHHHHHHHhcCC---------CCceeee
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAW--------PDARQFLEEARAVGQLR---------NRRLANL 118 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~---------hpniv~l 118 (484)
..+|.+++.||+|+||+||+|+. +|+.||||++..... ...+.+.+|+.+++.++ |||||++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 35688889999999999999998 779999999975432 22477899999998886 5555555
Q ss_pred ee-----------------eeee-------------CCceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHH
Q 011519 119 LG-----------------CCCE-------------GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEAL 168 (484)
Q Consensus 119 ~~-----------------~~~~-------------~~~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L 168 (484)
.+ ++.+ .+..+|||||+++|++.+.+. .+.+++..+..++.||+.||
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~---~~~~~~~~~~~i~~qi~~aL 174 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMR---TKLSSLATAKSILHQLTASL 174 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGT---TTCCCHHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHH---hcCCCHHHHHHHHHHHHHHH
Confidence 54 4443 678999999999998777773 35689999999999999999
Q ss_pred HHhh-cCCCcccccccccceeecCCC--------------------CceeeccCCccccCCCCcccCCCCCCCcccccCC
Q 011519 169 EYCT-SKERALYHDLNAYRIVFDDDV--------------------NPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTG 227 (484)
Q Consensus 169 ~~lH-~~~~ivH~Dlkp~Nill~~~~--------------------~~kl~DfG~a~~~~~~~~~~~t~~y~aPE~~~~~ 227 (484)
.||| +. ||+||||||+|||++.++ .+||+|||+++..... ...||+.|+|||++.+.
T Consensus 175 ~~lH~~~-~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-~~~gt~~y~aPE~~~g~ 252 (336)
T 2vuw_A 175 AVAEASL-RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-IVVFCDVSMDEDLFTGD 252 (336)
T ss_dssp HHHHHHH-CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-EEECCCCTTCSGGGCCC
T ss_pred HHHHHhC-CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-cEEEeecccChhhhcCC
Confidence 9999 88 999999999999999887 8999999999876543 45799999999999876
Q ss_pred CCCCCCceeehHHH-HHHHhhCCCCCCchhh-HHhhhccccc-cccccccCCCChHHHHHHHHHHHHHhccCCCCCCChH
Q 011519 228 RVTPESVMYSFGTL-LLDLLSGKHIPPSHAL-DLIRDRNIQT-LTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPR 304 (484)
Q Consensus 228 ~~~~~~Dv~slG~~-l~el~tg~~p~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ 304 (484)
. +.++||||||++ .+++++|..||..... .......... ..........+...++++.+||.+||+.| |+.
T Consensus 253 ~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d-----sa~ 326 (336)
T 2vuw_A 253 G-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS-----SAT 326 (336)
T ss_dssp S-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----SHH
T ss_pred C-ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC-----CHH
Confidence 6 889999998777 7788999887654211 0011111100 00111111123467899999999999977 999
Q ss_pred HHH-HH
Q 011519 305 SLV-TA 309 (484)
Q Consensus 305 ~il-~~ 309 (484)
+++ +|
T Consensus 327 e~l~~H 332 (336)
T 2vuw_A 327 DLLCQH 332 (336)
T ss_dssp HHHHHC
T ss_pred HHHhcC
Confidence 999 76
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-40 Score=332.57 Aligned_cols=238 Identities=16% Similarity=0.093 Sum_probs=181.9
Q ss_pred ccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCc---cHHHHHHHHHHHhcCCC-Cceeeee--------------
Q 011519 59 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP---DARQFLEEARAVGQLRN-RRLANLL-------------- 119 (484)
Q Consensus 59 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h-pniv~l~-------------- 119 (484)
+.+.+.||+|+||+||+|+ ..+|+.||||+++..... ..+.|.+|+.++..++| +|...+.
T Consensus 80 ~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 159 (413)
T 3dzo_A 80 LVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKD 159 (413)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEEC
T ss_pred EEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhccc
Confidence 4556778999999999999 567999999999743322 26779999999999987 3221111
Q ss_pred -------eeeee-----CCceEEEEecCCCCCHHhhhc-----cCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccc
Q 011519 120 -------GCCCE-----GDERLLVAEYMPNDTLAKHLF-----HWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDL 182 (484)
Q Consensus 120 -------~~~~~-----~~~~~lv~Ey~~~gsL~~~l~-----~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dl 182 (484)
.++.. ....+++|+++ +++|.+++. ......+++..++.++.||+.||.|||+. |||||||
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~iiHrDi 237 (413)
T 3dzo_A 160 PQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY-GLVHTYL 237 (413)
T ss_dssp CC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT-TEECSCC
T ss_pred CCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCCc
Confidence 11111 22457778776 679999984 22345688899999999999999999999 9999999
Q ss_pred cccceeecCCCCceeeccCCccccCCC-CcccCCCCCCCcccc----------cCCCCCCCCceeehHHHHHHHhhCCCC
Q 011519 183 NAYRIVFDDDVNPRLSCFGLMKNSRDG-RSYSTNLAFTPPEYL----------RTGRVTPESVMYSFGTLLLDLLSGKHI 251 (484)
Q Consensus 183 kp~Nill~~~~~~kl~DfG~a~~~~~~-~~~~~t~~y~aPE~~----------~~~~~~~~~Dv~slG~~l~el~tg~~p 251 (484)
||+|||++.++.+||+|||+++..... ....| +.|+|||++ .+..++.++|||||||++|||+||+.|
T Consensus 238 Kp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~P 316 (413)
T 3dzo_A 238 RPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLP 316 (413)
T ss_dssp CGGGEEECTTCCEEECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCC
T ss_pred ccceEEEecCCeEEEEeccceeecCCccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCC
Confidence 999999999999999999998875543 34566 999999999 555688899999999999999999998
Q ss_pred CCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 252 PPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
|........ ...+... ...+++.+.+|+.+||+.||++|||+.+++++
T Consensus 317 f~~~~~~~~----~~~~~~~------~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~ 364 (413)
T 3dzo_A 317 NTDDAALGG----SEWIFRS------CKNIPQPVRALLEGFLRYPKEDRLLPLQAMET 364 (413)
T ss_dssp CCTTGGGSC----SGGGGSS------CCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CCCcchhhh----HHHHHhh------cccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 865432111 1111111 12345789999999999999999998888765
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-34 Score=298.30 Aligned_cols=180 Identities=12% Similarity=0.066 Sum_probs=130.7
Q ss_pred cCCCCCCceEEEEE-eCCCcEEEEEEecCCCC----------ccHHHHHHHHHHHhcC-CCCceeeeeeeeeeCCceEEE
Q 011519 64 EHGEKAPNVVYKGK-LENQFRIAVKRFNRSAW----------PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERLLV 131 (484)
Q Consensus 64 ~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~----------~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~lv 131 (484)
..+.|++|.+..++ .-.|+.|+||++..... ...++|.+|+++|+++ .|+||+++++++.+.+..|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 45777777777766 44688899999975421 1245699999999999 699999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC--
Q 011519 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 209 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~-- 209 (484)
|||++|++|.++|. .+++++.. .|+.||+.||.|+|++ |||||||||+|||++.+|.+||+|||+++.....
T Consensus 321 MEyv~G~~L~d~i~--~~~~l~~~---~I~~QIl~AL~ylH~~-GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~ 394 (569)
T 4azs_A 321 MEKLPGRLLSDMLA--AGEEIDRE---KILGSLLRSLAALEKQ-GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCS 394 (569)
T ss_dssp EECCCSEEHHHHHH--TTCCCCHH---HHHHHHHHHHHHHHHT-TCEESCCCGGGEEECTTSCEEECCCTTEESCC---C
T ss_pred EecCCCCcHHHHHH--hCCCCCHH---HHHHHHHHHHHHHHHC-CceeccCchHhEEECCCCCEEEeecccCeeCCCCCc
Confidence 99999999999997 45677764 4889999999999999 9999999999999999999999999999876543
Q ss_pred --CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCC
Q 011519 210 --RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKH 250 (484)
Q Consensus 210 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~ 250 (484)
.+.+||+.|||||++.+ .+..++|+||+|++++++.++..
T Consensus 395 ~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~ 436 (569)
T 4azs_A 395 WPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWS 436 (569)
T ss_dssp CSHHHHHHHHHHHHHHC------------------CCCCTTHH
T ss_pred cccCceechhhccHHHhCC-CCCCcccccccccchhhhccccc
Confidence 34568999999999975 56778999999999988876653
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=4.2e-29 Score=257.79 Aligned_cols=175 Identities=14% Similarity=0.141 Sum_probs=143.9
Q ss_pred ccCCCCCCceEEEEEeCCCcEEEEEEecCCCCcc--------HHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEec
Q 011519 63 SEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPD--------ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (484)
Q Consensus 63 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--------~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey 134 (484)
+.||+|+||+||+|.. .++.+++|+........ .+++.+|++++++++||||+++..++...+..+|||||
T Consensus 342 ~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE~ 420 (540)
T 3en9_A 342 HLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMSY 420 (540)
T ss_dssp ------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEEC
T ss_pred CEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEEC
Confidence 4579999999999954 56789999875433221 34589999999999999999777777778888999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-----
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----- 209 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~----- 209 (484)
++|++|.+++.. +..++.||+.||.|||++ ||+||||||+|||++. .+||+|||+++.....
T Consensus 421 ~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~-gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~~ 487 (540)
T 3en9_A 421 INGKLAKDVIED----------NLDIAYKIGEIVGKLHKN-DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKAV 487 (540)
T ss_dssp CCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHT-TEECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHHH
T ss_pred CCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHC-cCccCCCCHHHEEECC--eEEEEECccCEECCCcccccc
Confidence 999999999953 568999999999999999 9999999999999998 9999999999987653
Q ss_pred ------CcccCCCCCCCcccccC--CCCCCCCceeehHHHHHHHhhCCCC
Q 011519 210 ------RSYSTNLAFTPPEYLRT--GRVTPESVMYSFGTLLLDLLSGKHI 251 (484)
Q Consensus 210 ------~~~~~t~~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~tg~~p 251 (484)
....||+.|||||++.. ..|+..+|+||..+-.++-+.++.+
T Consensus 488 ~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~r 537 (540)
T 3en9_A 488 DLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRAR 537 (540)
T ss_dssp HHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSC
T ss_pred chhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccc
Confidence 24578999999999986 4578889999999988888777644
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.4e-26 Score=219.46 Aligned_cols=158 Identities=16% Similarity=0.064 Sum_probs=126.0
Q ss_pred cCHHHHHHHhcCCCcccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCc------------------cHHHHHHHHH
Q 011519 44 YSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP------------------DARQFLEEAR 105 (484)
Q Consensus 44 ~~~~~~~~~~~~f~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~------------------~~~~~~~E~~ 105 (484)
+++..+....+.-..|.+.+.||+|+||.||+|...+|+.||||+++..... ....+.+|+.
T Consensus 77 ~~~~~l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~ 156 (282)
T 1zar_A 77 LSLYSLHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFR 156 (282)
T ss_dssp HHHHHHHHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHH
Confidence 3344455555555667777899999999999999977999999999643211 2346899999
Q ss_pred HHhcCCCCceeeeeeeeeeCCceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCccccccccc
Q 011519 106 AVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAY 185 (484)
Q Consensus 106 ~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~ 185 (484)
+|++++ | +++.+++.. +..++||||++||+|.+ +.. .....++.||+.||.|||+. ||+||||||+
T Consensus 157 ~l~~l~--~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~--------~~~~~i~~qi~~~l~~lH~~-giiHrDlkp~ 222 (282)
T 1zar_A 157 ALQKLQ--G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV--------ENPDEVLDMILEEVAKFYHR-GIVHGDLSQY 222 (282)
T ss_dssp HHHHTT--T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC--------SCHHHHHHHHHHHHHHHHHT-TEECSCCSTT
T ss_pred HHHhcc--C-CCcCeEEec-cceEEEEEecCCCcHHH-cch--------hhHHHHHHHHHHHHHHHHHC-CCEeCCCCHH
Confidence 999999 5 667765544 56799999999999998 521 12457999999999999998 9999999999
Q ss_pred ceeecCCCCceeeccCCccccCCCCcccCCCCCCCccccc
Q 011519 186 RIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLR 225 (484)
Q Consensus 186 Nill~~~~~~kl~DfG~a~~~~~~~~~~~t~~y~aPE~~~ 225 (484)
|||++ ++.+||+|||+++. +..++|||++.
T Consensus 223 NILl~-~~~vkl~DFG~a~~---------~~~~~a~e~l~ 252 (282)
T 1zar_A 223 NVLVS-EEGIWIIDFPQSVE---------VGEEGWREILE 252 (282)
T ss_dssp SEEEE-TTEEEECCCTTCEE---------TTSTTHHHHHH
T ss_pred HEEEE-CCcEEEEECCCCeE---------CCCCCHHHHHH
Confidence 99999 99999999999864 34578899875
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=3.4e-22 Score=187.00 Aligned_cols=151 Identities=14% Similarity=0.078 Sum_probs=114.9
Q ss_pred CHHHHHHHhcCCCcccccccCCCCCCceEEEEEe-CCCcE--EEEEEecCCCCcc------------------------H
Q 011519 45 SIETLRTATSGFAMENIVSEHGEKAPNVVYKGKL-ENQFR--IAVKRFNRSAWPD------------------------A 97 (484)
Q Consensus 45 ~~~~~~~~~~~f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~~------------------------~ 97 (484)
+...+....+.-..|.+.+.||+|+||.||+|.. .+|+. ||||+++...... .
T Consensus 35 ~~~~l~~~~~~~~~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (258)
T 1zth_A 35 TLKTLYKLSAKGYITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVF 114 (258)
T ss_dssp HHHHHHHHHHTTSEEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHH
T ss_pred HHHHHHHHHhCCCchhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHH
Confidence 3444445555555677888999999999999996 78888 9999976432110 1
Q ss_pred HHHHHHHHHHhcCCCCce--eeeeeeeeeCCceEEEEecCCC-C----CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHH
Q 011519 98 RQFLEEARAVGQLRNRRL--ANLLGCCCEGDERLLVAEYMPN-D----TLAKHLFHWETQPMKWAMRLRVALHIAEALEY 170 (484)
Q Consensus 98 ~~~~~E~~~l~~l~hpni--v~l~~~~~~~~~~~lv~Ey~~~-g----sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~ 170 (484)
..+.+|+.+|.++.|+++ +.+++. +..+|||||+.+ | +|.++... .++..+..++.||+.||.|
T Consensus 115 ~~~~~E~~~l~~l~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~ 185 (258)
T 1zth_A 115 IWTEKEFRNLERAKEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKR 185 (258)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHH
Confidence 257899999999988764 333332 356999999942 3 67766531 2355678999999999999
Q ss_pred hh-cCCCcccccccccceeecCCCCceeeccCCccccC
Q 011519 171 CT-SKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 207 (484)
Q Consensus 171 lH-~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~ 207 (484)
|| +. |||||||||+|||++. .++|+|||++....
T Consensus 186 lH~~~-givHrDlkp~NILl~~--~~~liDFG~a~~~~ 220 (258)
T 1zth_A 186 LYQEA-ELVHADLSEYNIMYID--KVYFIDMGQAVTLR 220 (258)
T ss_dssp HHHTS-CEECSSCSTTSEEESS--SEEECCCTTCEETT
T ss_pred HHHHC-CEEeCCCCHHHEEEcC--cEEEEECcccccCC
Confidence 99 87 9999999999999998 99999999987643
|
| >4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.84 E-value=2e-20 Score=154.83 Aligned_cols=107 Identities=18% Similarity=0.231 Sum_probs=103.6
Q ss_pred hHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHH
Q 011519 374 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQ 453 (484)
Q Consensus 374 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 453 (484)
++..+..++++|+.++++|+|++|+..|++||+++|. ++.+|+++|.+|..+|++++|+.++++||+++|+++.+|+++
T Consensus 9 nP~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~l 87 (126)
T 4gco_A 9 NPELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPE-NAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRK 87 (126)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHHH
Confidence 4677889999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 454 AAALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 454 g~~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
|.+|..+|++++|+..|++|++++|++.
T Consensus 88 g~~~~~~~~~~~A~~~~~~al~l~P~~~ 115 (126)
T 4gco_A 88 AACLVAMREWSKAQRAYEDALQVDPSNE 115 (126)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHCcCCH
Confidence 9999999999999999999999999764
|
| >2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8 | Back alignment and structure |
|---|
Probab=99.81 E-value=2.4e-19 Score=151.54 Aligned_cols=107 Identities=13% Similarity=0.090 Sum_probs=100.6
Q ss_pred HHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCC------CH-----HHHHHHHHHHHhcCCHHHHHHHHHHHHhc-
Q 011519 375 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMV------SP-----TAFARRSLSYLMSDMPQEALNDASQAQVI- 442 (484)
Q Consensus 375 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~------~~-----~~~~~~a~~~~~~~~~~~A~~~~~~al~~- 442 (484)
...+..+...|+.+++.|+|++|+..|++||+++|+. +. .+|+|+|.++.++|+|++|+.+|++||++
T Consensus 8 ~~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~ 87 (159)
T 2hr2_A 8 VVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYF 87 (159)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhh
Confidence 5678889999999999999999999999999999982 22 39999999999999999999999999999
Q ss_pred ------CCCChHHH----HHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 443 ------SPVWHMAA----YLQAAALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 443 ------~p~~~~a~----~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
+|+++++| |++|.++..+|++++|+.+|++|++++|.+.
T Consensus 88 n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~ 136 (159)
T 2hr2_A 88 NRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERK 136 (159)
T ss_dssp HHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred hccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcH
Confidence 99999999 9999999999999999999999999998765
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=99.79 E-value=3.7e-20 Score=179.95 Aligned_cols=154 Identities=10% Similarity=0.051 Sum_probs=109.0
Q ss_pred ccCHHHHHHHhcCCCcccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCc--------------cHHHH--------
Q 011519 43 EYSIETLRTATSGFAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP--------------DARQF-------- 100 (484)
Q Consensus 43 ~~~~~~~~~~~~~f~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------------~~~~~-------- 100 (484)
-+++-.|....+.=.-|.+.+.||.|+||.||+|...+|+.||||+++..... .....
T Consensus 81 gyD~LAL~~L~~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A 160 (397)
T 4gyi_A 81 GLDYLALHTHAARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAA 160 (397)
T ss_dssp HHHHHHHHHHHHTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHH
Confidence 34555666666665678999999999999999999889999999998642110 01122
Q ss_pred HHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccc
Q 011519 101 LEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180 (484)
Q Consensus 101 ~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~ 180 (484)
.+|...|.++.+.++....-+.. ...+|||||++|++|..+.. . .....++.||+.+|.+||+. |||||
T Consensus 161 ~kE~~nL~rL~~~gv~vp~p~~~--~~~~LVME~i~G~~L~~l~~------~--~~~~~l~~qll~~l~~lH~~-gIVHr 229 (397)
T 4gyi_A 161 IKEFAFMKALYEEGFPVPEPIAQ--SRHTIVMSLVDALPMRQVSS------V--PDPASLYADLIALILRLAKH-GLIHG 229 (397)
T ss_dssp HHHHHHHHHHHHTTCSCCCEEEE--ETTEEEEECCSCEEGGGCCC------C--SCHHHHHHHHHHHHHHHHHT-TEECS
T ss_pred HHHHHHHHHHHhcCCCCCeeeec--cCceEEEEecCCccHhhhcc------c--HHHHHHHHHHHHHHHHHHHC-CCcCC
Confidence 23555555554333221111111 22379999999998876542 1 13456889999999999998 99999
Q ss_pred cccccceeecCCCC----------ceeeccCCccccC
Q 011519 181 DLNAYRIVFDDDVN----------PRLSCFGLMKNSR 207 (484)
Q Consensus 181 Dlkp~Nill~~~~~----------~kl~DfG~a~~~~ 207 (484)
||||.|||+++++. +.|+||+.+....
T Consensus 230 DLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 230 DFNEFNILIREEKDAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp CCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCEETT
T ss_pred CCCHHHEEEeCCCCcccccccccceEEEEeCCcccCC
Confidence 99999999987763 8899999876543
|
| >3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A | Back alignment and structure |
|---|
Probab=99.78 E-value=2.3e-18 Score=146.87 Aligned_cols=111 Identities=6% Similarity=-0.069 Sum_probs=105.1
Q ss_pred hhhhhhHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChH
Q 011519 369 EMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHM 448 (484)
Q Consensus 369 e~~~~~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~ 448 (484)
+...-++.++..+...|..+++.|+|++|+..|+++++++|. ++.+|+++|.+|..+|+|++|+..|++|++++|+++.
T Consensus 27 ~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~-~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~ 105 (151)
T 3gyz_A 27 DINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFY-NVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYT 105 (151)
T ss_dssp GGCCSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCCH
T ss_pred HHhCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCcH
Confidence 334445788899999999999999999999999999999999 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhccccc
Q 011519 449 AAYLQAAALFALGKENEAQAALREASILENKK 480 (484)
Q Consensus 449 a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 480 (484)
+|+++|.+|..+|++++|+..|++|++++|+.
T Consensus 106 ~~~~lg~~~~~lg~~~eA~~~~~~al~l~~~~ 137 (151)
T 3gyz_A 106 PVFHTGQCQLRLKAPLKAKECFELVIQHSNDE 137 (151)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCH
Confidence 99999999999999999999999999998754
|
| >4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.76 E-value=4.6e-18 Score=140.73 Aligned_cols=105 Identities=14% Similarity=0.132 Sum_probs=98.8
Q ss_pred hHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCC-------
Q 011519 374 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVW------- 446 (484)
Q Consensus 374 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~------- 446 (484)
..+.+..+++.|+.++++|+|++|+..|++||+++|+ ++.+|+|+|.+|..+|+|++|+.++++||+++|++
T Consensus 4 ~~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~-~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~ 82 (127)
T 4gcn_A 4 MTDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPS-NITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLI 82 (127)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHH
T ss_pred cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHH
Confidence 4567888999999999999999999999999999999 99999999999999999999999999999999876
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccc
Q 011519 447 HMAAYLQAAALFALGKENEAQAALREASILENK 479 (484)
Q Consensus 447 ~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 479 (484)
+.+|+++|.++..+|++++|++.|++|++++|+
T Consensus 83 a~~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~ 115 (127)
T 4gcn_A 83 AKAMSRAGNAFQKQNDLSLAVQWFHRSLSEFRD 115 (127)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcC
Confidence 468999999999999999999999999998764
|
| >3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.74 E-value=9.8e-18 Score=144.81 Aligned_cols=107 Identities=21% Similarity=0.211 Sum_probs=101.3
Q ss_pred hHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhc------------------CCCCCHHHHHHHHHHHHhcCCHHHHHHH
Q 011519 374 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDV------------------GTMVSPTAFARRSLSYLMSDMPQEALND 435 (484)
Q Consensus 374 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~------------------~p~~~~~~~~~~a~~~~~~~~~~~A~~~ 435 (484)
....+..+...|+.+++.|+|++|+..|++||++ +|. +..+|+|+|.||+++|+|++|+.+
T Consensus 7 ~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~nla~~~~~~~~~~~A~~~ 85 (162)
T 3rkv_A 7 KLKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRK-NIPLYANMSQCYLNIGDLHEAEET 85 (162)
T ss_dssp -CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHT-HHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHH-HHHHHHHHHHHHHhcCcHHHHHHH
Confidence 4567889999999999999999999999999999 666 778999999999999999999999
Q ss_pred HHHHHhcCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 436 ASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 436 ~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
|++||+++|+++.+|+++|.+|..+|++++|+.+|++|++++|.+.
T Consensus 86 ~~~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~ 131 (162)
T 3rkv_A 86 SSEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAA 131 (162)
T ss_dssp HHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGH
T ss_pred HHHHHhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCH
Confidence 9999999999999999999999999999999999999999999764
|
| >3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.72 E-value=5.2e-17 Score=133.78 Aligned_cols=101 Identities=19% Similarity=0.236 Sum_probs=98.6
Q ss_pred HHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHH
Q 011519 376 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAA 455 (484)
Q Consensus 376 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 455 (484)
..+..+...|..+++.|+|++|+..|+++++++|. ++.+|+++|.++..+|++++|+.+++++++++|+++.+|+++|.
T Consensus 2 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~ 80 (126)
T 3upv_A 2 MKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPE-DARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKAT 80 (126)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 45778999999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHhcc
Q 011519 456 ALFALGKENEAQAALREASILE 477 (484)
Q Consensus 456 ~~~~~~~~~~A~~~~~~al~l~ 477 (484)
++..+|++++|+..|+++++++
T Consensus 81 ~~~~~~~~~~A~~~~~~al~~~ 102 (126)
T 3upv_A 81 AQIAVKEYASALETLDAARTKD 102 (126)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHhCHHHHHHHHHHHHHhC
Confidence 9999999999999999999999
|
| >2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=1.7e-16 Score=134.96 Aligned_cols=106 Identities=11% Similarity=0.040 Sum_probs=102.2
Q ss_pred hHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHH
Q 011519 374 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQ 453 (484)
Q Consensus 374 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 453 (484)
.+.+...+...|..+++.|+|++|+..|+++++++|. ++.+|+++|.++..+|++++|+..|+++++++|+++.+|+++
T Consensus 17 ~p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~l 95 (148)
T 2vgx_A 17 SSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHY-DSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEPRFPFHA 95 (148)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHH
T ss_pred CHhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHH
Confidence 4677888999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHhccccc
Q 011519 454 AAALFALGKENEAQAALREASILENKK 480 (484)
Q Consensus 454 g~~~~~~~~~~~A~~~~~~al~l~~~~ 480 (484)
|.+|..+|++++|+..|++|++++|++
T Consensus 96 g~~~~~~g~~~~A~~~~~~al~~~p~~ 122 (148)
T 2vgx_A 96 AECLLQXGELAEAESGLFLAQELIANX 122 (148)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHCcCC
Confidence 999999999999999999999998764
|
| >3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus} | Back alignment and structure |
|---|
Probab=99.69 E-value=2.5e-16 Score=136.16 Aligned_cols=106 Identities=24% Similarity=0.334 Sum_probs=102.3
Q ss_pred HHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHH
Q 011519 375 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQA 454 (484)
Q Consensus 375 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 454 (484)
...+..+...|..+++.|+|++|+..|+++++++|. ++.+|+++|.+|..+|++++|+.+++++++++|+++.+|+++|
T Consensus 8 ~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg 86 (164)
T 3sz7_A 8 TPESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPA-NPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLG 86 (164)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCc-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 467788999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 455 AALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 455 ~~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
.+|..+|++++|+..|+++++++|++.
T Consensus 87 ~~~~~~g~~~~A~~~~~~al~~~p~~~ 113 (164)
T 3sz7_A 87 LARFDMADYKGAKEAYEKGIEAEGNGG 113 (164)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHSSSC
T ss_pred HHHHHccCHHHHHHHHHHHHHhCCCch
Confidence 999999999999999999999998764
|
| >2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A | Back alignment and structure |
|---|
Probab=99.68 E-value=3.5e-16 Score=131.89 Aligned_cols=107 Identities=10% Similarity=0.071 Sum_probs=102.3
Q ss_pred hHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHH
Q 011519 374 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQ 453 (484)
Q Consensus 374 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 453 (484)
.+.....+...|..+++.|+|++|+..|+++++.+|. ++.+|+++|.++..+|++++|+..++++++++|+++.+|+++
T Consensus 14 ~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 92 (142)
T 2xcb_A 14 SEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHY-DARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFHA 92 (142)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHH
Confidence 4667788899999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 454 AAALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 454 g~~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
|.+|..+|++++|+..|+++++++|++.
T Consensus 93 g~~~~~~g~~~~A~~~~~~al~~~p~~~ 120 (142)
T 2xcb_A 93 AECHLQLGDLDGAESGFYSARALAAAQP 120 (142)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHTCG
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCc
Confidence 9999999999999999999999988543
|
| >4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=2.6e-16 Score=134.19 Aligned_cols=109 Identities=13% Similarity=0.130 Sum_probs=102.4
Q ss_pred hhhHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHH
Q 011519 372 TGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAY 451 (484)
Q Consensus 372 ~~~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~ 451 (484)
...+..+..+...|..+++.|+|++|+..|+++|+++|+ ++.+|+++|.+|..+|++++|+..++++++++|+++.+|+
T Consensus 25 ~~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~ 103 (150)
T 4ga2_A 25 PSPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQER-DPKAHRFLGLLYELEENTDKAVECYRRSVELNPTQKDLVL 103 (150)
T ss_dssp CSHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred ccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCCHHHHH
Confidence 345677888899999999999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHH-HHHHHhcccccc
Q 011519 452 LQAAALFALGKENEAQAA-LREASILENKKS 481 (484)
Q Consensus 452 ~~g~~~~~~~~~~~A~~~-~~~al~l~~~~~ 481 (484)
++|.+|..+|++++|.+. +++|++++|++.
T Consensus 104 ~la~~~~~~~~~~~aa~~~~~~al~l~P~~~ 134 (150)
T 4ga2_A 104 KIAELLCKNDVTDGRAKYWVERAAKLFPGSP 134 (150)
T ss_dssp HHHHHHHHHCSSSSHHHHHHHHHHHHSTTCH
T ss_pred HHHHHHHHcCChHHHHHHHHHHHHHhCcCCH
Confidence 999999999999988876 599999999764
|
| >1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.66 E-value=4.7e-16 Score=127.37 Aligned_cols=103 Identities=13% Similarity=0.067 Sum_probs=94.3
Q ss_pred hhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 011519 378 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAAL 457 (484)
Q Consensus 378 a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 457 (484)
...+...|..+++.|++++|+..|+++++.+|+ ++.+|+++|.++..+|++++|+..+++|++++|+++.+++.+|.+|
T Consensus 17 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~ 95 (121)
T 1hxi_A 17 HENPMEEGLSMLKLANLAEAALAFEAVCQKEPE-REEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSH 95 (121)
T ss_dssp CSCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 445788999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHHhcccccc
Q 011519 458 FALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 458 ~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
..+|++++|+..|+++++++|+..
T Consensus 96 ~~~g~~~~A~~~~~~al~~~P~~~ 119 (121)
T 1hxi_A 96 TNEHNANAALASLRAWLLSQPQYE 119 (121)
T ss_dssp HHHHHHHHHHHHHHHHHC------
T ss_pred HHcCCHHHHHHHHHHHHHhCcCCC
Confidence 999999999999999999998753
|
| >3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B* | Back alignment and structure |
|---|
Probab=99.61 E-value=4.5e-15 Score=123.60 Aligned_cols=103 Identities=21% Similarity=0.351 Sum_probs=99.9
Q ss_pred HHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHH
Q 011519 376 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAA 455 (484)
Q Consensus 376 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 455 (484)
..+..+...|..++..|+|++|+..|+++++++|. ++.+|+++|.++..+|++++|+..++++++++|+++.+++.+|.
T Consensus 7 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~ 85 (137)
T 3q49_B 7 PSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQ 85 (137)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcC-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHHH
Confidence 45678899999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHhcccc
Q 011519 456 ALFALGKENEAQAALREASILENK 479 (484)
Q Consensus 456 ~~~~~~~~~~A~~~~~~al~l~~~ 479 (484)
++..+|++++|+..|+++++++|+
T Consensus 86 ~~~~~~~~~~A~~~~~~a~~~~p~ 109 (137)
T 3q49_B 86 CQLEMESYDEAIANLQRAYSLAKE 109 (137)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhHHHHHHHHHHHHHHChh
Confidence 999999999999999999999987
|
| >1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.59 E-value=1.6e-15 Score=127.85 Aligned_cols=92 Identities=15% Similarity=0.045 Sum_probs=86.4
Q ss_pred HHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCH----------HHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 011519 388 AFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMP----------QEALNDASQAQVISPVWHMAAYLQAAAL 457 (484)
Q Consensus 388 ~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~----------~~A~~~~~~al~~~p~~~~a~~~~g~~~ 457 (484)
.-+.+.|++|+..|++|++++|+ ++.+|.|+|.++..++++ ++|+..|++||+++|+++.+||++|.+|
T Consensus 12 ~~r~~~feeA~~~~~~Ai~l~P~-~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay 90 (158)
T 1zu2_A 12 FDRILLFEQIRQDAENTYKSNPL-DADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAY 90 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHH
Confidence 44668899999999999999999 999999999999999875 5999999999999999999999999999
Q ss_pred HHcC-----------CHHHHHHHHHHHHhccccc
Q 011519 458 FALG-----------KENEAQAALREASILENKK 480 (484)
Q Consensus 458 ~~~~-----------~~~~A~~~~~~al~l~~~~ 480 (484)
..+| ++++|++.|++|++++|++
T Consensus 91 ~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~ 124 (158)
T 1zu2_A 91 TSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDN 124 (158)
T ss_dssp HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred HHhcccCcchhhhhccHHHHHHHHHHHHHhCCCC
Confidence 9885 8999999999999999975
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=99.59 E-value=5.9e-15 Score=156.80 Aligned_cols=131 Identities=16% Similarity=0.090 Sum_probs=111.2
Q ss_pred HHHHHHHHhCCcCch-hhHhhhhhhhHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCC
Q 011519 350 AIHEILEKLGYKDDE-GAATEMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDM 428 (484)
Q Consensus 350 ~~~e~l~~~~y~~~~-~~a~e~~~~~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~ 428 (484)
.+-..+...|-.++. ........-.++.+..+.+.|..+.++|++++|+..|++||+++|+ ++.+|+|+|.+|..+|+
T Consensus 14 nLG~~~~~~G~~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~-~~~a~~nLg~~l~~~g~ 92 (723)
T 4gyw_A 14 NLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPT-FADAYSNMGNTLKEMQD 92 (723)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCC
Confidence 444445555533333 3333333445677888999999999999999999999999999999 99999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 429 PQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 429 ~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
+++|++.|++|++++|+++.+|+++|.+|..+|++++|++.|++|++++|+..
T Consensus 93 ~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~ 145 (723)
T 4gyw_A 93 VQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFP 145 (723)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCh
Confidence 99999999999999999999999999999999999999999999999998753
|
| >3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.58 E-value=5.8e-15 Score=133.03 Aligned_cols=102 Identities=14% Similarity=0.033 Sum_probs=77.1
Q ss_pred hhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHH----------------HHHHHHhcCCHHHHHHHHHHHHh
Q 011519 378 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFAR----------------RSLSYLMSDMPQEALNDASQAQV 441 (484)
Q Consensus 378 a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~----------------~a~~~~~~~~~~~A~~~~~~al~ 441 (484)
+..+..+|..+++.|+|++|+..|+++++++|+ ++.+|++ +|.+|..+|++++|+..++++++
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 82 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIALNID-RTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQ 82 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHH-HHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-ChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 445666777777777777777777777777777 7777777 77777777777777777777777
Q ss_pred cCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhccccc
Q 011519 442 ISPVWHMAAYLQAAALFALGKENEAQAALREASILENKK 480 (484)
Q Consensus 442 ~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 480 (484)
++|+++.+|+++|.+|..+|++++|+..|+++++++|++
T Consensus 83 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~ 121 (208)
T 3urz_A 83 KAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADN 121 (208)
T ss_dssp HCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC
T ss_pred HCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC
Confidence 777777777777777777777777777777777777764
|
| >1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A | Back alignment and structure |
|---|
Probab=99.58 E-value=8.5e-15 Score=148.35 Aligned_cols=108 Identities=15% Similarity=0.215 Sum_probs=100.5
Q ss_pred hhHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCC---------------HHHHHHHHHHHHhcCCHHHHHHHHH
Q 011519 373 GQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVS---------------PTAFARRSLSYLMSDMPQEALNDAS 437 (484)
Q Consensus 373 ~~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~~ 437 (484)
..+..+..++.+|+.++++|+|++|+..|++||+++|. + ..+|+|+|.||+++|+|++|+.+|+
T Consensus 263 ~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~ 341 (457)
T 1kt0_A 263 EKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEM-EYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCD 341 (457)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTT-CCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcc-cccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 35678889999999999999999999999999999999 7 6899999999999999999999999
Q ss_pred HHHhcCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 438 QAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 438 ~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
+|++++|+++++|+++|.+|+.+|++++|+.+|++|++++|++.
T Consensus 342 ~al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~ 385 (457)
T 1kt0_A 342 KALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNK 385 (457)
T ss_dssp HHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----
T ss_pred HHHhcCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCH
Confidence 99999999999999999999999999999999999999998764
|
| >1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A | Back alignment and structure |
|---|
Probab=99.58 E-value=1.2e-14 Score=141.16 Aligned_cols=108 Identities=12% Similarity=0.154 Sum_probs=103.1
Q ss_pred hhHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCC---------------HHHHHHHHHHHHhcCCHHHHHHHHH
Q 011519 373 GQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVS---------------PTAFARRSLSYLMSDMPQEALNDAS 437 (484)
Q Consensus 373 ~~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~~ 437 (484)
..+..+..+...|+.+++.|+|++|+..|++|++++|. + ..+|+|+|.+|.++|+|++|+..|+
T Consensus 142 ~~p~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~ 220 (336)
T 1p5q_A 142 EKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEY-ESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCN 220 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTT-CCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhc-cccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 35678889999999999999999999999999999999 7 6899999999999999999999999
Q ss_pred HHHhcCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 438 QAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 438 ~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
+|++++|+++.+|+++|.+|..+|++++|+..|++|++++|++.
T Consensus 221 ~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~ 264 (336)
T 1p5q_A 221 KALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNK 264 (336)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCH
T ss_pred HHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCH
Confidence 99999999999999999999999999999999999999998753
|
| >2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.58 E-value=2e-14 Score=128.21 Aligned_cols=107 Identities=20% Similarity=0.214 Sum_probs=101.9
Q ss_pred hHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCH----------------HHHHHHHHHHHhcCCHHHHHHHHH
Q 011519 374 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSP----------------TAFARRSLSYLMSDMPQEALNDAS 437 (484)
Q Consensus 374 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~----------------~~~~~~a~~~~~~~~~~~A~~~~~ 437 (484)
....+..+...|..+++.|+|++|+..|++++++.|. ++ .+|+++|.++..+|+|++|+.+++
T Consensus 34 ~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~ 112 (198)
T 2fbn_A 34 KVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIH-TEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHAS 112 (198)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTT-CTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhc-ccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 5677888999999999999999999999999999998 66 899999999999999999999999
Q ss_pred HHHhcCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 438 QAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 438 ~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
++++++|+++.+++++|.+|..+|++++|+..|++|++++|++.
T Consensus 113 ~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~ 156 (198)
T 2fbn_A 113 KVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNL 156 (198)
T ss_dssp HHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcH
Confidence 99999999999999999999999999999999999999998653
|
| >4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A* | Back alignment and structure |
|---|
Probab=99.58 E-value=1e-14 Score=154.96 Aligned_cols=107 Identities=14% Similarity=0.061 Sum_probs=103.1
Q ss_pred hHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHH
Q 011519 374 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQ 453 (484)
Q Consensus 374 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 453 (484)
.++.+..+.+.|+.+.++|++++|+..|++||+++|+ ++.+|+|+|.+|.++|++++|+..|++|++++|+++.+|+++
T Consensus 5 ~P~~a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~-~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nL 83 (723)
T 4gyw_A 5 CPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE-FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNM 83 (723)
T ss_dssp -CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 3678899999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 454 AAALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 454 g~~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
|.+|..+|++++|++.|++|++++|+..
T Consensus 84 g~~l~~~g~~~~A~~~~~kAl~l~P~~~ 111 (723)
T 4gyw_A 84 GNTLKEMQDVQGALQCYTRAIQINPAFA 111 (723)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 9999999999999999999999998754
|
| >2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ... | Back alignment and structure |
|---|
Probab=99.57 E-value=7.9e-15 Score=144.59 Aligned_cols=105 Identities=6% Similarity=-0.083 Sum_probs=61.0
Q ss_pred HHHhhhhhHhHHHHHhccC-HHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHH
Q 011519 375 MQETLNSKKKGDVAFRHKD-FRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQ 453 (484)
Q Consensus 375 ~~~a~~~~~~g~~~~~~~~-~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 453 (484)
+.....|..+|..+.+.|+ +++|+..|++||+++|+ ++.+|+++|.++..+|++++|+..|++||+++|++..+|+++
T Consensus 128 P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~-~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~l 206 (382)
T 2h6f_A 128 AANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPK-NYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHR 206 (382)
T ss_dssp TTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccCHHHHHHH
Confidence 4445555555555555554 55555555555555555 555555555555555555555555555555555555555555
Q ss_pred HHHHHHcCCHHHHHHHHHHHHhccccc
Q 011519 454 AAALFALGKENEAQAALREASILENKK 480 (484)
Q Consensus 454 g~~~~~~~~~~~A~~~~~~al~l~~~~ 480 (484)
|.++..+|++++|++.|++|++++|++
T Consensus 207 g~~~~~~g~~~eAl~~~~~al~l~P~~ 233 (382)
T 2h6f_A 207 QWVIQEFKLWDNELQYVDQLLKEDVRN 233 (382)
T ss_dssp HHHHHHHTCCTTHHHHHHHHHHHCTTC
T ss_pred HHHHHHcCChHHHHHHHHHHHHhCCCC
Confidence 555555555555555555555555543
|
| >1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.56 E-value=4.2e-14 Score=113.66 Aligned_cols=104 Identities=23% Similarity=0.332 Sum_probs=99.6
Q ss_pred HhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHH
Q 011519 377 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAA 456 (484)
Q Consensus 377 ~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 456 (484)
.+..+...|..++..|++++|+..|+++++.+|. ++.++.++|.++..+|++++|+..++++++++|+++.+++.+|.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~ 81 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPH-NHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAA 81 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHH
Confidence 4667889999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHHhcccccc
Q 011519 457 LFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 457 ~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
+..+|++++|+..|+++++++|.+.
T Consensus 82 ~~~~~~~~~A~~~~~~~~~~~~~~~ 106 (118)
T 1elw_A 82 LEFLNRFEEAKRTYEEGLKHEANNP 106 (118)
T ss_dssp HHHTTCHHHHHHHHHHHHTTCTTCH
T ss_pred HHHHhhHHHHHHHHHHHHHcCCCCH
Confidence 9999999999999999999988653
|
| >2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2 | Back alignment and structure |
|---|
Probab=99.56 E-value=1.7e-14 Score=136.43 Aligned_cols=103 Identities=21% Similarity=0.356 Sum_probs=99.6
Q ss_pred HhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHH
Q 011519 377 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAA 456 (484)
Q Consensus 377 ~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 456 (484)
.+..+...|..+++.|+|++|+..|++|++++|. ++.+|+++|.+|..+|++++|+.++++|++++|+++.+|+++|.+
T Consensus 3 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~ 81 (281)
T 2c2l_A 3 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQC 81 (281)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 4567889999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHHhccccc
Q 011519 457 LFALGKENEAQAALREASILENKK 480 (484)
Q Consensus 457 ~~~~~~~~~A~~~~~~al~l~~~~ 480 (484)
|..+|++++|+..|++|++++|++
T Consensus 82 ~~~~g~~~~A~~~~~~al~l~p~~ 105 (281)
T 2c2l_A 82 QLEMESYDEAIANLQRAYSLAKEQ 105 (281)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHcCCHHHHHHHHHHHHHhCccc
Confidence 999999999999999999999865
|
| >2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ... | Back alignment and structure |
|---|
Probab=99.56 E-value=1.1e-14 Score=143.49 Aligned_cols=104 Identities=10% Similarity=-0.055 Sum_probs=60.3
Q ss_pred HHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCC-HHHHHHHHHHHHhcCCCChHHHHHHH
Q 011519 376 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDM-PQEALNDASQAQVISPVWHMAAYLQA 454 (484)
Q Consensus 376 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~-~~~A~~~~~~al~~~p~~~~a~~~~g 454 (484)
..+..+...|..+.+.|++++|+..|+++|+++|+ +..+|++||.++..+|+ +++|+.++++||+++|+++.+|+++|
T Consensus 95 ~~~~a~~~lg~~~~~~g~~~~Al~~~~~al~l~P~-~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g 173 (382)
T 2h6f_A 95 KFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAA-NYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRR 173 (382)
T ss_dssp HHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHCCChHHHHHHHHHHHHhCcc-CHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHHH
Confidence 44445555555555555555555555555555555 55555555555555554 55555555555555555555555555
Q ss_pred HHHHHcCCHHHHHHHHHHHHhccccc
Q 011519 455 AALFALGKENEAQAALREASILENKK 480 (484)
Q Consensus 455 ~~~~~~~~~~~A~~~~~~al~l~~~~ 480 (484)
.++..+|++++|+..|++|++++|++
T Consensus 174 ~~~~~~g~~~eAl~~~~kal~ldP~~ 199 (382)
T 2h6f_A 174 VLVEWLRDPSQELEFIADILNQDAKN 199 (382)
T ss_dssp HHHHHHTCCTTHHHHHHHHHHHCTTC
T ss_pred HHHHHccCHHHHHHHHHHHHHhCccC
Confidence 55555555555555555555555543
|
| >3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A | Back alignment and structure |
|---|
Probab=99.56 E-value=2.8e-14 Score=125.35 Aligned_cols=107 Identities=20% Similarity=0.167 Sum_probs=101.4
Q ss_pred hHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHH
Q 011519 374 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQ 453 (484)
Q Consensus 374 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 453 (484)
.+.....+...|..+...++++.|+..+.++++++|. +..++..+|.+|..+|++++|+..++++++++|+++.+|+++
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~-~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~l 147 (184)
T 3vtx_A 69 DTTSAEAYYILGSANFMIDEKQAAIDALQRAIALNTV-YADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSI 147 (184)
T ss_dssp CCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CchhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-chHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHH
Confidence 3455667888999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 454 AAALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 454 g~~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
|.+|..+|++++|+..|++|++++|++.
T Consensus 148 g~~~~~~g~~~~A~~~~~~al~~~p~~a 175 (184)
T 3vtx_A 148 GLAYEGKGLRDEAVKYFKKALEKEEKKA 175 (184)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHTTHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHhCCccCH
Confidence 9999999999999999999999999763
|
| >3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.56 E-value=3.1e-14 Score=128.28 Aligned_cols=111 Identities=6% Similarity=0.006 Sum_probs=98.6
Q ss_pred hhhhhhHHHhhhhhH----------------hHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHH
Q 011519 369 EMWTGQMQETLNSKK----------------KGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEA 432 (484)
Q Consensus 369 e~~~~~~~~a~~~~~----------------~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A 432 (484)
......+.++..+.. .|..+.+.|++++|+..|+++++++|+ ++.+|+++|.++..+|++++|
T Consensus 29 ~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A 107 (208)
T 3urz_A 29 QTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQKAPN-NVDCLEACAEMQVCRGQEKDA 107 (208)
T ss_dssp HHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHcCCHHHH
Confidence 333445666667777 999999999999999999999999999 999999999999999999999
Q ss_pred HHHHHHHHhcCCCChHHHHHHHHHHHHc-----------------------------------CCHHHHHHHHHHHHhcc
Q 011519 433 LNDASQAQVISPVWHMAAYLQAAALFAL-----------------------------------GKENEAQAALREASILE 477 (484)
Q Consensus 433 ~~~~~~al~~~p~~~~a~~~~g~~~~~~-----------------------------------~~~~~A~~~~~~al~l~ 477 (484)
+..++++++++|+++.+|+++|.+|+.+ |+|++|+..|++|++++
T Consensus 108 ~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~ 187 (208)
T 3urz_A 108 LRMYEKILQLEADNLAANIFLGNYYYLTAEQEKKKLETDYKKLSSPTKMQYARYRDGLSKLFTTRYEKARNSLQKVILRF 187 (208)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTS
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Confidence 9999999999999999999888876443 46899999999999999
Q ss_pred ccc
Q 011519 478 NKK 480 (484)
Q Consensus 478 ~~~ 480 (484)
|+.
T Consensus 188 P~~ 190 (208)
T 3urz_A 188 PST 190 (208)
T ss_dssp CCH
T ss_pred CCH
Confidence 864
|
| >2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.55 E-value=5.5e-14 Score=115.79 Aligned_cols=106 Identities=23% Similarity=0.257 Sum_probs=100.7
Q ss_pred HHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHH
Q 011519 375 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQA 454 (484)
Q Consensus 375 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 454 (484)
......+...|..+++.|++++|+..|+++++.+|. +..+++++|.++..+|++++|+..++++++++|+++.+++.+|
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la 91 (133)
T 2lni_A 13 PDLALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPK-DAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKA 91 (133)
T ss_dssp SCHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTT-CHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHH
Confidence 355677888999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 455 AALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 455 ~~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
.++..+|++++|+..|+++++++|.+.
T Consensus 92 ~~~~~~~~~~~A~~~~~~~~~~~p~~~ 118 (133)
T 2lni_A 92 AALEAMKDYTKAMDVYQKALDLDSSCK 118 (133)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCGGGT
T ss_pred HHHHHHhhHHHHHHHHHHHHHhCCCch
Confidence 999999999999999999999998653
|
| >2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.55 E-value=2.1e-14 Score=130.33 Aligned_cols=106 Identities=15% Similarity=0.198 Sum_probs=100.3
Q ss_pred HHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHH
Q 011519 375 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQA 454 (484)
Q Consensus 375 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 454 (484)
+.++..+...|..+++.|++++|+..|+++|+++|+ ++.+++++|.++..+|++++|+..++++++++|+++.+++.+|
T Consensus 2 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg 80 (217)
T 2pl2_A 2 QTAEQNPLRLGVQLYALGRYDAALTLFERALKENPQ-DPEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLS 80 (217)
T ss_dssp --CCHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSS-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHH
Confidence 345667889999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHc-----------CCHHHHHHHHHHHHhcccccc
Q 011519 455 AALFAL-----------GKENEAQAALREASILENKKS 481 (484)
Q Consensus 455 ~~~~~~-----------~~~~~A~~~~~~al~l~~~~~ 481 (484)
.++..+ |++++|+..|++|++++|++.
T Consensus 81 ~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~ 118 (217)
T 2pl2_A 81 EAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYA 118 (217)
T ss_dssp HHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccH
Confidence 999999 999999999999999998753
|
| >4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=3.8e-15 Score=126.85 Aligned_cols=97 Identities=9% Similarity=-0.095 Sum_probs=90.3
Q ss_pred hHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHcCCH
Q 011519 384 KGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKE 463 (484)
Q Consensus 384 ~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~ 463 (484)
.|..+..+|++++|++.|.+++..+|. ++..++++|.+|+++|+|++|+..++++++++|+++.+|+++|.+|..+|++
T Consensus 3 LG~~~~~~~~~e~ai~~~~~a~~~~p~-~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~ 81 (150)
T 4ga2_A 3 LGSMRRSKADVERYIASVQGSTPSPRQ-KSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEENT 81 (150)
T ss_dssp ----CCCHHHHHHHHHHHHHHSCSHHH-HHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred hHHHHHHcChHHHHHHHHHHhcccCcc-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCch
Confidence 477788899999999999999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccc
Q 011519 464 NEAQAALREASILENKKS 481 (484)
Q Consensus 464 ~~A~~~~~~al~l~~~~~ 481 (484)
++|+..|++|++++|++.
T Consensus 82 ~~A~~~~~~al~~~p~~~ 99 (150)
T 4ga2_A 82 DKAVECYRRSVELNPTQK 99 (150)
T ss_dssp HHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHhCCCCH
Confidence 999999999999999764
|
| >2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.53 E-value=5.4e-14 Score=118.31 Aligned_cols=104 Identities=23% Similarity=0.252 Sum_probs=99.0
Q ss_pred HHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCC---HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHH
Q 011519 376 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVS---PTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYL 452 (484)
Q Consensus 376 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~ 452 (484)
..+..+...|..++..|+|++|+..|+++++.+|+ + ..++.++|.++..+|++++|+..++++++++|+++.+++.
T Consensus 26 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~ 104 (148)
T 2dba_A 26 SSVEQLRKEGNELFKCGDYGGALAAYTQALGLDAT-PQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYR 104 (148)
T ss_dssp CCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCC-HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHccc-chHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHH
Confidence 45667888999999999999999999999999998 7 8899999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHhccccc
Q 011519 453 QAAALFALGKENEAQAALREASILENKK 480 (484)
Q Consensus 453 ~g~~~~~~~~~~~A~~~~~~al~l~~~~ 480 (484)
+|.++..+|++++|+..|+++++++|++
T Consensus 105 ~a~~~~~~~~~~~A~~~~~~al~~~p~~ 132 (148)
T 2dba_A 105 RSQALEKLGRLDQAVLDLQRCVSLEPKN 132 (148)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHCSSC
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHcCCCc
Confidence 9999999999999999999999999865
|
| >2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=99.53 E-value=6.1e-14 Score=111.64 Aligned_cols=104 Identities=16% Similarity=0.131 Sum_probs=99.0
Q ss_pred HHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCC--ChHHHHHH
Q 011519 376 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPV--WHMAAYLQ 453 (484)
Q Consensus 376 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~--~~~a~~~~ 453 (484)
..+..+...|..++..|++++|+..|+++++++|. +..++.++|.++..+|++++|+..++++++++|+ +..+++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l 82 (112)
T 2kck_A 4 QNPEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPE-ESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAK 82 (112)
T ss_dssp SSTTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHHH
T ss_pred CcHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHHH
Confidence 34566788999999999999999999999999999 9999999999999999999999999999999999 99999999
Q ss_pred HHHHHHc-CCHHHHHHHHHHHHhccccc
Q 011519 454 AAALFAL-GKENEAQAALREASILENKK 480 (484)
Q Consensus 454 g~~~~~~-~~~~~A~~~~~~al~l~~~~ 480 (484)
|.++..+ |++++|++.|+++++.+|..
T Consensus 83 ~~~~~~~~~~~~~A~~~~~~~~~~~p~~ 110 (112)
T 2kck_A 83 ADALRYIEGKEVEAEIAEARAKLEHHHH 110 (112)
T ss_dssp HHHHTTCSSCSHHHHHHHHHHGGGCCCC
T ss_pred HHHHHHHhCCHHHHHHHHHHHhhcccCC
Confidence 9999999 99999999999999998864
|
| >1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A | Back alignment and structure |
|---|
Probab=99.53 E-value=3.6e-14 Score=139.50 Aligned_cols=107 Identities=19% Similarity=0.222 Sum_probs=101.2
Q ss_pred hHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHh----------------cCCCCCHHHHHHHHHHHHhcCCHHHHHHHHH
Q 011519 374 QMQETLNSKKKGDVAFRHKDFRASIECYTQFID----------------VGTMVSPTAFARRSLSYLMSDMPQEALNDAS 437 (484)
Q Consensus 374 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~----------------~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~ 437 (484)
....+..+...|+.++++|+|++|+..|++||+ ++|. +..+|+|+|.+|+++|+|++|+.+++
T Consensus 219 ~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~-~~~~~~nla~~~~~~g~~~~A~~~~~ 297 (370)
T 1ihg_A 219 ILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPV-ALSCVLNIGACKLKMSDWQGAVDSCL 297 (370)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHH-HHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHH-HHHHHHHHHHHHHhccCHHHHHHHHH
Confidence 456778899999999999999999999999999 7787 88999999999999999999999999
Q ss_pred HHHhcCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 438 QAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 438 ~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
+|++++|+++++|+++|.+|..+|++++|+..|++|++++|++.
T Consensus 298 ~al~~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~ 341 (370)
T 1ihg_A 298 EALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDK 341 (370)
T ss_dssp HHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHhCchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCH
Confidence 99999999999999999999999999999999999999998653
|
| >1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A | Back alignment and structure |
|---|
Probab=99.53 E-value=1.5e-13 Score=117.96 Aligned_cols=106 Identities=25% Similarity=0.352 Sum_probs=99.8
Q ss_pred HHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHH
Q 011519 375 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQA 454 (484)
Q Consensus 375 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 454 (484)
...+..+...|..++..|+|++|+..|+++++.+|. +..+++++|.++..+|++++|+..++++++++|+++.+++.+|
T Consensus 10 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a 88 (166)
T 1a17_A 10 LKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRA 88 (166)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHH
Confidence 567788999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 455 AALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 455 ~~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
.++..+|++++|+..|+++++++|.+.
T Consensus 89 ~~~~~~~~~~~A~~~~~~a~~~~p~~~ 115 (166)
T 1a17_A 89 ASNMALGKFRAALRDYETVVKVKPHDK 115 (166)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHHhccHHHHHHHHHHHHHhCCCCH
Confidence 999999999999999999999988653
|
| >2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=99.53 E-value=1e-13 Score=114.02 Aligned_cols=101 Identities=14% Similarity=0.085 Sum_probs=95.8
Q ss_pred hhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCH---HHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCC---hHHHHH
Q 011519 379 LNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSP---TAFARRSLSYLMSDMPQEALNDASQAQVISPVW---HMAAYL 452 (484)
Q Consensus 379 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~---~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~---~~a~~~ 452 (484)
..+...|..+++.|+|++|+..|+++++.+|+ ++ .+++++|.++..+|++++|+..++++++.+|++ +.+++.
T Consensus 3 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~ 81 (129)
T 2xev_A 3 RTAYNVAFDALKNGKYDDASQLFLSFLELYPN-GVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLK 81 (129)
T ss_dssp CCHHHHHHHHHHTTCHHHHHHHHHHHHHHCSS-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHCCC-CcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHH
Confidence 35678899999999999999999999999999 77 799999999999999999999999999999999 899999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHhccccc
Q 011519 453 QAAALFALGKENEAQAALREASILENKK 480 (484)
Q Consensus 453 ~g~~~~~~~~~~~A~~~~~~al~l~~~~ 480 (484)
+|.+|..+|++++|+..|+++++.+|+.
T Consensus 82 la~~~~~~g~~~~A~~~~~~~~~~~p~~ 109 (129)
T 2xev_A 82 LGLSQYGEGKNTEAQQTLQQVATQYPGS 109 (129)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSTTS
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHCCCC
Confidence 9999999999999999999999998864
|
| >2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.52 E-value=4.1e-14 Score=128.36 Aligned_cols=102 Identities=14% Similarity=0.030 Sum_probs=53.7
Q ss_pred HHhhhhhHhHHHHHhc-----------cCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCC
Q 011519 376 QETLNSKKKGDVAFRH-----------KDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISP 444 (484)
Q Consensus 376 ~~a~~~~~~g~~~~~~-----------~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p 444 (484)
..+..+...|..+.+. |++++|+..|+++++++|+ ++.+|+++|.++..+|++++|+..++++++++
T Consensus 71 ~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~- 148 (217)
T 2pl2_A 71 RYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPR-YAPLHLQRGLVYALLGERDKAEASLKQALALE- 148 (217)
T ss_dssp TCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-
T ss_pred CcHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc-
Confidence 3344445555555555 5555555555555555555 55555555555555555555555555555555
Q ss_pred CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccc
Q 011519 445 VWHMAAYLQAAALFALGKENEAQAALREASILENK 479 (484)
Q Consensus 445 ~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 479 (484)
+++.+++++|.+|..+|++++|+..|+++++++|+
T Consensus 149 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~ 183 (217)
T 2pl2_A 149 DTPEIRSALAELYLSMGRLDEALAQYAKALEQAPK 183 (217)
T ss_dssp CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT
T ss_pred cchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Confidence 55555555555555555555555555555555543
|
| >2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.52 E-value=2.2e-14 Score=139.40 Aligned_cols=108 Identities=13% Similarity=0.122 Sum_probs=97.5
Q ss_pred hhHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCH-----------------HHHHHHHHHHHhcCCHHHHHHH
Q 011519 373 GQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSP-----------------TAFARRSLSYLMSDMPQEALND 435 (484)
Q Consensus 373 ~~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~-----------------~~~~~~a~~~~~~~~~~~A~~~ 435 (484)
..+..+..++..|+.+++.|+|++|+..|++|++++|. +. .+|+|+|.||+++|+|++|+.+
T Consensus 174 ~~~~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~-~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~ 252 (338)
T 2if4_A 174 ERIGAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGD-DFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGH 252 (338)
T ss_dssp HHHHHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCH-HHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhcc-chhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 35677888999999999999999999999999999998 66 3899999999999999999999
Q ss_pred HHHHHhcCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 436 ASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 436 ~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
|++|++++|+++++|+++|.+|..+|++++|+.+|++|++++|.+.
T Consensus 253 ~~~al~~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~ 298 (338)
T 2if4_A 253 CNIVLTEEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDK 298 (338)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC------
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCH
Confidence 9999999999999999999999999999999999999999998654
|
| >2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1 | Back alignment and structure |
|---|
Probab=99.52 E-value=2.3e-13 Score=111.34 Aligned_cols=106 Identities=24% Similarity=0.301 Sum_probs=101.7
Q ss_pred hHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHH
Q 011519 374 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQ 453 (484)
Q Consensus 374 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 453 (484)
....+..+...|..++..|++++|+..|+++++.+|. ++.++.++|.++..+|++++|+..++++++++|+++.+++.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~ 86 (131)
T 2vyi_A 8 DSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPA-NAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRM 86 (131)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred chhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHH
Confidence 4567888999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHhccccc
Q 011519 454 AAALFALGKENEAQAALREASILENKK 480 (484)
Q Consensus 454 g~~~~~~~~~~~A~~~~~~al~l~~~~ 480 (484)
|.++..+|++++|+..|+++++++|++
T Consensus 87 ~~~~~~~~~~~~A~~~~~~~~~~~p~~ 113 (131)
T 2vyi_A 87 GLALSSLNKHVEAVAYYKKALELDPDN 113 (131)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHhCCHHHHHHHHHHHHhcCccc
Confidence 999999999999999999999998864
|
| >4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.51 E-value=1.4e-13 Score=125.38 Aligned_cols=104 Identities=15% Similarity=0.086 Sum_probs=99.3
Q ss_pred HhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCC-CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHH
Q 011519 377 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGT-MVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAA 455 (484)
Q Consensus 377 ~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p-~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 455 (484)
++..+...|..++..|+|++|+..|+++++++| . +..+++++|.++..+|++++|+..++++++++|+++.+|+.+|.
T Consensus 6 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~-~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~ 84 (228)
T 4i17_A 6 DPNQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQ-DSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSA 84 (228)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHccCHHHHHHHHHHHHhccCCC-CcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHH
Confidence 346789999999999999999999999999999 7 88999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 456 ALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 456 ~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
+|..+|++++|+..|+++++++|++.
T Consensus 85 ~~~~~~~~~~A~~~~~~al~~~p~~~ 110 (228)
T 4i17_A 85 AYRDMKNNQEYIATLTEGIKAVPGNA 110 (228)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHcccHHHHHHHHHHHHHHCCCcH
Confidence 99999999999999999999998753
|
| >3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.50 E-value=2e-14 Score=116.66 Aligned_cols=90 Identities=11% Similarity=0.047 Sum_probs=81.9
Q ss_pred hccCHHHHHHHHHHHHhc---CCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHcCCHHHH
Q 011519 390 RHKDFRASIECYTQFIDV---GTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEA 466 (484)
Q Consensus 390 ~~~~~~~A~~~~~~ai~~---~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A 466 (484)
..|++++|+..|++++++ +|. ++.+++++|.+|..+|+|++|+..++++++++|+++.+++++|.++..+|++++|
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A 80 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKD-LAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQG 80 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCcc-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHH
Confidence 468999999999999999 688 8899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccccc
Q 011519 467 QAALREASILENKK 480 (484)
Q Consensus 467 ~~~~~~al~l~~~~ 480 (484)
+..|+++++++|++
T Consensus 81 ~~~~~~al~~~p~~ 94 (117)
T 3k9i_A 81 VELLLKIIAETSDD 94 (117)
T ss_dssp HHHHHHHHHHHCCC
T ss_pred HHHHHHHHHhCCCc
Confidence 99999999998765
|
| >1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A | Back alignment and structure |
|---|
Probab=99.47 E-value=3.1e-13 Score=110.70 Aligned_cols=103 Identities=15% Similarity=0.160 Sum_probs=97.8
Q ss_pred HHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCC-------hH
Q 011519 376 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVW-------HM 448 (484)
Q Consensus 376 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~-------~~ 448 (484)
..+..+...|..++..|++++|+..|+++++.+|. ++.+++++|.++..+|++++|+..++++++++|++ +.
T Consensus 2 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~ 80 (131)
T 1elr_A 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELDPT-NMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAK 80 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCc-cHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHH
Confidence 34667889999999999999999999999999999 99999999999999999999999999999999988 99
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcccc
Q 011519 449 AAYLQAAALFALGKENEAQAALREASILENK 479 (484)
Q Consensus 449 a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 479 (484)
+++.+|.++..+|++++|+..|+++++++|+
T Consensus 81 ~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~ 111 (131)
T 1elr_A 81 AYARIGNSYFKEEKYKDAIHFYNKSLAEHRT 111 (131)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999999873
|
| >2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.47 E-value=3.8e-13 Score=117.42 Aligned_cols=112 Identities=13% Similarity=0.116 Sum_probs=103.3
Q ss_pred hhhhhhHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHH-HHhcCCH--HHHHHHHHHHHhcCCC
Q 011519 369 EMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLS-YLMSDMP--QEALNDASQAQVISPV 445 (484)
Q Consensus 369 e~~~~~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~-~~~~~~~--~~A~~~~~~al~~~p~ 445 (484)
......+.....+...|..++..|++++|+..|+++++++|. ++.++.++|.+ +...|++ ++|+..++++++++|+
T Consensus 35 ~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~ 113 (177)
T 2e2e_A 35 DKIRANPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGE-NAELYAALATVLYYQASQHMTAQTRAMIDKALALDSN 113 (177)
T ss_dssp HHHHHCCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCS-CHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTT
T ss_pred HHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCC
Confidence 333334556778899999999999999999999999999999 99999999999 8899999 9999999999999999
Q ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 446 WHMAAYLQAAALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 446 ~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
++.+++.+|.+|..+|++++|+..|+++++++|.+.
T Consensus 114 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~ 149 (177)
T 2e2e_A 114 EITALMLLASDAFMQANYAQAIELWQKVMDLNSPRI 149 (177)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTS
T ss_pred cHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCCc
Confidence 999999999999999999999999999999998753
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=99.46 E-value=1.2e-13 Score=129.22 Aligned_cols=139 Identities=14% Similarity=-0.021 Sum_probs=109.2
Q ss_pred cccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCC-CCceeeeeeeeeeCCceEEEEecCC
Q 011519 58 MENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVAEYMP 136 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~lv~Ey~~ 136 (484)
.|.+...+|.|+++.||++... ++.+++|+...........+.+|+.+++.+. +..+.++++++...+..|+||||++
T Consensus 15 ~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~ 93 (263)
T 3tm0_A 15 KYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEAD 93 (263)
T ss_dssp TSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCS
T ss_pred cceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecC
Confidence 4566667788888999999854 5789999987532122345889999999884 6788899999988889999999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcC------------------------------------------
Q 011519 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK------------------------------------------ 174 (484)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~------------------------------------------ 174 (484)
|.+|.+.+. +......++.+++.+|..||+.
T Consensus 94 G~~l~~~~~-------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (263)
T 3tm0_A 94 GVLCSEEYE-------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKD 166 (263)
T ss_dssp SEEHHHHCC-------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSS
T ss_pred CeehhhccC-------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCC
Confidence 999988642 1122347888999999999981
Q ss_pred ----------------CCcccccccccceeecCCCCceeeccCCcc
Q 011519 175 ----------------ERALYHDLNAYRIVFDDDVNPRLSCFGLMK 204 (484)
Q Consensus 175 ----------------~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~ 204 (484)
..++|+|++|.|||+++++.+.|+||+.+.
T Consensus 167 ~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 167 PRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp HHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 258999999999999876556799998753
|
| >4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.45 E-value=4.2e-13 Score=122.24 Aligned_cols=103 Identities=15% Similarity=0.153 Sum_probs=98.4
Q ss_pred HHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCh-------H
Q 011519 376 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWH-------M 448 (484)
Q Consensus 376 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~-------~ 448 (484)
.+...+...|..++..|++++|+..|+++++.+|. +..+|.++|.+|..+|++++|+..++++++++|+++ .
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~ 118 (228)
T 4i17_A 40 QDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYN-LANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAI 118 (228)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCS-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcc-hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHH
Confidence 44567778999999999999999999999999999 999999999999999999999999999999999999 7
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcccc
Q 011519 449 AAYLQAAALFALGKENEAQAALREASILENK 479 (484)
Q Consensus 449 a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 479 (484)
+|+.+|.++..+|++++|+..|++|++++|+
T Consensus 119 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~ 149 (228)
T 4i17_A 119 YYLKEGQKFQQAGNIEKAEENYKHATDVTSK 149 (228)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHTTSSCH
T ss_pred HHHHHhHHHHHhccHHHHHHHHHHHHhcCCC
Confidence 7999999999999999999999999999987
|
| >3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A | Back alignment and structure |
|---|
Probab=99.45 E-value=8e-13 Score=115.97 Aligned_cols=113 Identities=17% Similarity=0.159 Sum_probs=96.1
Q ss_pred hhhhhhhHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCh
Q 011519 368 TEMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWH 447 (484)
Q Consensus 368 ~e~~~~~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~ 447 (484)
.+....++..+..+...|..+.+.|++++|+..+.+++..+|. ++.++.++|.++...++++.|+..+.++++++|++.
T Consensus 29 ~~al~~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~~ 107 (184)
T 3vtx_A 29 KKVLKADPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTT-SAEAYYILGSANFMIDEKQAAIDALQRAIALNTVYA 107 (184)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCch-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccch
Confidence 3344445667778888888888888888888888888888888 888888888888888888888888888999999999
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 448 MAAYLQAAALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 448 ~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
.+++.+|.+|..+|++++|++.|+++++++|.+.
T Consensus 108 ~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~ 141 (184)
T 3vtx_A 108 DAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFI 141 (184)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhh
Confidence 9999999999999999999999999999988653
|
| >2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.45 E-value=4.8e-14 Score=112.56 Aligned_cols=95 Identities=17% Similarity=0.293 Sum_probs=89.9
Q ss_pred HhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCC------hHHH
Q 011519 377 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVW------HMAA 450 (484)
Q Consensus 377 ~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~------~~a~ 450 (484)
++..+...|..++..|+|++|+..|+++++++|. ++.+|+++|.++..+|++++|+..++++++++|++ ..++
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~ 81 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQ-NPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQ 81 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHH
Confidence 4667889999999999999999999999999999 99999999999999999999999999999999999 9999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHH
Q 011519 451 YLQAAALFALGKENEAQAALRE 472 (484)
Q Consensus 451 ~~~g~~~~~~~~~~~A~~~~~~ 472 (484)
+++|.++..+|++++|+..|++
T Consensus 82 ~~~~~~~~~~~~~~~a~~~~~~ 103 (111)
T 2l6j_A 82 YRLELAQGAVGSVQIPVVEVDE 103 (111)
T ss_dssp HHHHHHHHHHHCCCCCSSSSSS
T ss_pred HHHHHHHHHHHhHhhhHhHHHH
Confidence 9999999999999998877664
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=99.45 E-value=2e-13 Score=138.90 Aligned_cols=106 Identities=25% Similarity=0.352 Sum_probs=101.4
Q ss_pred HHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHH
Q 011519 375 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQA 454 (484)
Q Consensus 375 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 454 (484)
...+..+...|..++++|+|++|+..|++|++++|+ ++.+|+++|.+|.++|+|++|+.++++|++++|+++.+|+++|
T Consensus 3 ~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg 81 (477)
T 1wao_1 3 LKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRA 81 (477)
T ss_dssp HHHHTTSSSSSSSTTTTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 456778899999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 455 AALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 455 ~~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
.+|..+|++++|++.|++|++++|++.
T Consensus 82 ~~~~~~g~~~eA~~~~~~al~~~p~~~ 108 (477)
T 1wao_1 82 ASNMALGKFRAALRDYETVVKVKPHDK 108 (477)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHSTTCT
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 999999999999999999999998654
|
| >1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B* | Back alignment and structure |
|---|
Probab=99.43 E-value=1.3e-12 Score=117.39 Aligned_cols=103 Identities=15% Similarity=0.098 Sum_probs=98.0
Q ss_pred HhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCh---------
Q 011519 377 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWH--------- 447 (484)
Q Consensus 377 ~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~--------- 447 (484)
.+..+...|..+++.|++++|+..|+++++++|. ++.+|+++|.+|..+|++++|+..+++++++.|++.
T Consensus 36 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 114 (213)
T 1hh8_A 36 HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKH-LAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGL 114 (213)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTB
T ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-chHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhcc
Confidence 4567889999999999999999999999999999 999999999999999999999999999999888877
Q ss_pred -------HHHHHHHHHHHHcCCHHHHHHHHHHHHhccccc
Q 011519 448 -------MAAYLQAAALFALGKENEAQAALREASILENKK 480 (484)
Q Consensus 448 -------~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 480 (484)
.+++++|.+|..+|++++|+..|+++++++|+.
T Consensus 115 ~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~ 154 (213)
T 1hh8_A 115 QFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEP 154 (213)
T ss_dssp CCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSG
T ss_pred ccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCccc
Confidence 999999999999999999999999999999854
|
| >1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A | Back alignment and structure |
|---|
Probab=99.43 E-value=2.3e-12 Score=104.34 Aligned_cols=103 Identities=18% Similarity=0.232 Sum_probs=98.3
Q ss_pred hhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 011519 378 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAAL 457 (484)
Q Consensus 378 a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 457 (484)
+..+...|..+...|++++|+..|+++++.+|. +..++.++|.++...|++++|+..++++++++|+++.+++.+|.++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~ 87 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN-NAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAY 87 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcC-cHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHH
Confidence 566788999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHHHHhcccccc
Q 011519 458 FALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 458 ~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
..+|++++|+..|+++++++|++.
T Consensus 88 ~~~~~~~~A~~~~~~~~~~~~~~~ 111 (125)
T 1na0_A 88 YKQGDYDEAIEYYQKALELDPNNA 111 (125)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHhcCHHHHHHHHHHHHHhCCCcH
Confidence 999999999999999999988653
|
| >3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A | Back alignment and structure |
|---|
Probab=99.39 E-value=2e-13 Score=116.09 Aligned_cols=87 Identities=9% Similarity=-0.186 Sum_probs=81.2
Q ss_pred HHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 011519 394 FRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREA 473 (484)
Q Consensus 394 ~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~a 473 (484)
+..+-..|+++++++|+ ++.+++++|.++..+|+|++|+..|+++++++|+++.+|+++|.+|..+|++++|+..|++|
T Consensus 18 ~~~~~~~l~~al~l~p~-~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~a 96 (151)
T 3gyz_A 18 AINSGATLKDINAIPDD-MMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVA 96 (151)
T ss_dssp HHHTSCCTGGGCCSCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHCCCCHHHHhCCCHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHH
Confidence 33344667899999999 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred Hhcccccc
Q 011519 474 SILENKKS 481 (484)
Q Consensus 474 l~l~~~~~ 481 (484)
++++|++.
T Consensus 97 l~l~P~~~ 104 (151)
T 3gyz_A 97 FALGKNDY 104 (151)
T ss_dssp HHHSSSCC
T ss_pred HhhCCCCc
Confidence 99999764
|
| >2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis} | Back alignment and structure |
|---|
Probab=99.39 E-value=1.3e-12 Score=105.36 Aligned_cols=85 Identities=16% Similarity=0.108 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 011519 395 RASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREAS 474 (484)
Q Consensus 395 ~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al 474 (484)
++|+..|+++++.+|. ++.+++++|.+|..+|++++|+..++++++++|+++.+|+.+|.+|..+|++++|+..|++++
T Consensus 2 ~~a~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al 80 (115)
T 2kat_A 2 QAITERLEAMLAQGTD-NMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESGL 80 (115)
T ss_dssp CCHHHHHHHHHTTTCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 4689999999999999 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccccc
Q 011519 475 ILENKK 480 (484)
Q Consensus 475 ~l~~~~ 480 (484)
+++|..
T Consensus 81 ~~~~~~ 86 (115)
T 2kat_A 81 AAAQSR 86 (115)
T ss_dssp HHHHHH
T ss_pred Hhcccc
Confidence 998754
|
| >4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.38 E-value=1.6e-12 Score=106.98 Aligned_cols=89 Identities=10% Similarity=0.074 Sum_probs=82.0
Q ss_pred hhhhhhhHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCh
Q 011519 368 TEMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWH 447 (484)
Q Consensus 368 ~e~~~~~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~ 447 (484)
.+.....+..+..+...|..+++.|++++|+..|++||+++|+ ++.+|+++|.+|..+|++++|+.+++++++++|++.
T Consensus 37 ~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~~~~~~A~~~~~~al~l~P~~~ 115 (126)
T 4gco_A 37 NEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSK-FIKGYIRKAACLVAMREWSKAQRAYEDALQVDPSNE 115 (126)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhh-hhHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCcCCH
Confidence 3333445677889999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH
Q 011519 448 MAAYLQAAAL 457 (484)
Q Consensus 448 ~a~~~~g~~~ 457 (484)
.++..++.++
T Consensus 116 ~a~~~l~~~l 125 (126)
T 4gco_A 116 EAREGVRNCL 125 (126)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHhc
Confidence 9999998874
|
| >1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.38 E-value=4.7e-12 Score=118.04 Aligned_cols=106 Identities=12% Similarity=0.062 Sum_probs=101.4
Q ss_pred HHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHH
Q 011519 375 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQA 454 (484)
Q Consensus 375 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 454 (484)
+..+..+...|..++..|++++|+..|+++++++|. ++.+|.++|.++..+|++++|+..++++++++|+++.+++.+|
T Consensus 40 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la 118 (275)
T 1xnf_A 40 DERAQLLYERGVLYDSLGLRALARNDFSQALAIRPD-MPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRG 118 (275)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHH
T ss_pred chhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCC-cHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCccccHHHHHHH
Confidence 467788999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 455 AALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 455 ~~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
.+|..+|++++|+..|+++++++|++.
T Consensus 119 ~~~~~~g~~~~A~~~~~~a~~~~~~~~ 145 (275)
T 1xnf_A 119 IALYYGGRDKLAQDDLLAFYQDDPNDP 145 (275)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHhccHHHHHHHHHHHHHhCCCCh
Confidence 999999999999999999999988653
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.38 E-value=4.1e-13 Score=142.87 Aligned_cols=112 Identities=12% Similarity=-0.054 Sum_probs=104.5
Q ss_pred hhhhhhhHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCh
Q 011519 368 TEMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWH 447 (484)
Q Consensus 368 ~e~~~~~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~ 447 (484)
.......+.++..+...|..+++.|+|++|+..|++|++++|+ ++.+|+++|.++..+|++++ +..|++|++++|+++
T Consensus 457 ~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~-~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~~ 534 (681)
T 2pzi_A 457 DDLAERVGWRWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPG-ELAPKLALAATAELAGNTDE-HKFYQTVWSTNDGVI 534 (681)
T ss_dssp HHHHHHHCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT-CSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTCH
T ss_pred HHHhccCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCchH
Confidence 3344445677889999999999999999999999999999999 99999999999999999999 999999999999999
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 448 MAAYLQAAALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 448 ~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
.+|+++|.+|..+|++++|++.|++|++++|...
T Consensus 535 ~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~ 568 (681)
T 2pzi_A 535 SAAFGLARARSAEGDRVGAVRTLDEVPPTSRHFT 568 (681)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHTSCTTSTTHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHhhcccCcccH
Confidence 9999999999999999999999999999998653
|
| >3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.37 E-value=4.2e-12 Score=116.97 Aligned_cols=104 Identities=18% Similarity=0.222 Sum_probs=100.4
Q ss_pred hhHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHH
Q 011519 373 GQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYL 452 (484)
Q Consensus 373 ~~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~ 452 (484)
..+..+..+...|..++..|++++|+..|+++++.+|. ++.+++++|.++..+|++++|+..++++++++|+++.+|+.
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~ 212 (258)
T 3uq3_A 134 VNPEKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPE-DARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIR 212 (258)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred cCcchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcc-cHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 34667788999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHhcc
Q 011519 453 QAAALFALGKENEAQAALREASILE 477 (484)
Q Consensus 453 ~g~~~~~~~~~~~A~~~~~~al~l~ 477 (484)
+|.++..+|++++|+..|+++++++
T Consensus 213 l~~~~~~~g~~~~A~~~~~~a~~~~ 237 (258)
T 3uq3_A 213 KATAQIAVKEYASALETLDAARTKD 237 (258)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999
|
| >1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B* | Back alignment and structure |
|---|
Probab=99.37 E-value=4.8e-12 Score=113.62 Aligned_cols=101 Identities=15% Similarity=0.144 Sum_probs=94.4
Q ss_pred HHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHH
Q 011519 376 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAA 455 (484)
Q Consensus 376 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 455 (484)
.++..+...|..++..|+|++|+..|++++ +| ++.+|+++|.+|..+|++++|+..++++++++|+++.+|+++|.
T Consensus 4 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~--~~--~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~ 79 (213)
T 1hh8_A 4 VEAISLWNEGVLAADKKDWKGALDAFSAVQ--DP--HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGM 79 (213)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHTSS--SC--CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHc--CC--ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHH
Confidence 456778899999999999999999999996 43 57899999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHhccccc
Q 011519 456 ALFALGKENEAQAALREASILENKK 480 (484)
Q Consensus 456 ~~~~~~~~~~A~~~~~~al~l~~~~ 480 (484)
+|..+|++++|+..|++++++.|++
T Consensus 80 ~~~~~~~~~~A~~~~~~al~~~~~~ 104 (213)
T 1hh8_A 80 LYYQTEKYDLAIKDLKEALIQLRGN 104 (213)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTTTTC
T ss_pred HHHHcccHHHHHHHHHHHHHhCCCc
Confidence 9999999999999999999988754
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=99.34 E-value=1.6e-12 Score=121.14 Aligned_cols=127 Identities=14% Similarity=0.080 Sum_probs=97.3
Q ss_pred CCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCc--eeeeeeeeeeCCceEEEEecCCCCCHHhh
Q 011519 66 GEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRR--LANLLGCCCEGDERLLVAEYMPNDTLAKH 143 (484)
Q Consensus 66 G~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpn--iv~l~~~~~~~~~~~lv~Ey~~~gsL~~~ 143 (484)
+.|..+.||++...+|..++||+..... ...+.+|+.+++.+.+.+ +.+++++....+..++||||++|.+|.
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~~---~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~-- 103 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSGA---LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL-- 103 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSCT---TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCccc---chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--
Confidence 4566799999987778889999986542 245778999999885434 566888888878899999999998884
Q ss_pred hccCCCCCCCHHHHHHHHHHHHHHHHHhhcCC------------------------------------------------
Q 011519 144 LFHWETQPMKWAMRLRVALHIAEALEYCTSKE------------------------------------------------ 175 (484)
Q Consensus 144 l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------------------------------------------------ 175 (484)
.. . .+ ...++.+++..|..||+..
T Consensus 104 ~~---~--~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 175 (264)
T 1nd4_A 104 SS---H--LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLK 175 (264)
T ss_dssp TS---C--CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHH
T ss_pred cC---c--CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHH
Confidence 21 1 12 2356778888888888741
Q ss_pred ---------CcccccccccceeecCCCCceeeccCCccc
Q 011519 176 ---------RALYHDLNAYRIVFDDDVNPRLSCFGLMKN 205 (484)
Q Consensus 176 ---------~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 205 (484)
+++|+|++|.|||+++++.+.|+|||.+..
T Consensus 176 ~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 176 ARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp HTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 289999999999998776677999998643
|
| >2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A | Back alignment and structure |
|---|
Probab=99.33 E-value=1.5e-11 Score=100.78 Aligned_cols=103 Identities=19% Similarity=0.244 Sum_probs=97.5
Q ss_pred HHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHH
Q 011519 376 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAA 455 (484)
Q Consensus 376 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 455 (484)
.....+...|..+...|++++|+..|+++++.+|. +..++.++|.++...|++++|+..++++++.+|.+..+++.+|.
T Consensus 33 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~ 111 (136)
T 2fo7_A 33 RSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPR-SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGN 111 (136)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCC-chHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHH
Confidence 44566778899999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHhcccc
Q 011519 456 ALFALGKENEAQAALREASILENK 479 (484)
Q Consensus 456 ~~~~~~~~~~A~~~~~~al~l~~~ 479 (484)
++..+|++++|+..|+++++++|.
T Consensus 112 ~~~~~~~~~~A~~~~~~~~~~~~~ 135 (136)
T 2fo7_A 112 AYYKQGDYDEAIEYYQKALELDPR 135 (136)
T ss_dssp HHHTTTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHccHHHHHHHHHHHHccCCC
Confidence 999999999999999999999875
|
| >3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus} | Back alignment and structure |
|---|
Probab=99.33 E-value=6.3e-12 Score=117.01 Aligned_cols=105 Identities=11% Similarity=0.066 Sum_probs=98.2
Q ss_pred HHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCC---HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCC---ChH
Q 011519 375 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVS---PTAFARRSLSYLMSDMPQEALNDASQAQVISPV---WHM 448 (484)
Q Consensus 375 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~---~~~ 448 (484)
...+..++..|..+++.|+|++|+..|+++++.+|. + +.+++++|.+|..+|+|++|+..++++++++|+ .+.
T Consensus 12 ~~~~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~ 90 (261)
T 3qky_A 12 HSSPQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRT-HEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQ 90 (261)
T ss_dssp CSSHHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSC-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHH
T ss_pred CCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHH
Confidence 345678899999999999999999999999999999 7 889999999999999999999999999999885 468
Q ss_pred HHHHHHHHHHH--------cCCHHHHHHHHHHHHhccccc
Q 011519 449 AAYLQAAALFA--------LGKENEAQAALREASILENKK 480 (484)
Q Consensus 449 a~~~~g~~~~~--------~~~~~~A~~~~~~al~l~~~~ 480 (484)
+++.+|.++.. +|++++|+..|+++++++|+.
T Consensus 91 a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~ 130 (261)
T 3qky_A 91 AEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNH 130 (261)
T ss_dssp HHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCc
Confidence 99999999999 999999999999999999865
|
| >2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1 | Back alignment and structure |
|---|
Probab=99.33 E-value=1.2e-11 Score=112.88 Aligned_cols=104 Identities=14% Similarity=0.169 Sum_probs=70.3
Q ss_pred HHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHH
Q 011519 375 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQA 454 (484)
Q Consensus 375 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 454 (484)
+.....+...|..+...|++++|+..|+++++.+|. +..++.++|.++..+|++++|+..++++++++|++..+++.+|
T Consensus 54 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a 132 (243)
T 2q7f_A 54 KEDAIPYINFANLLSSVNELERALAFYDKALELDSS-AATAYYGAGNVYVVKEMYKEAKDMFEKALRAGMENGDLFYMLG 132 (243)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCSHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCc-chHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 344555666666666667777777777777766666 6666666666666667777777666666666666666666666
Q ss_pred HHHHHcCCHHHHHHHHHHHHhcccc
Q 011519 455 AALFALGKENEAQAALREASILENK 479 (484)
Q Consensus 455 ~~~~~~~~~~~A~~~~~~al~l~~~ 479 (484)
.++..+|++++|+..|+++++++|+
T Consensus 133 ~~~~~~~~~~~A~~~~~~~~~~~~~ 157 (243)
T 2q7f_A 133 TVLVKLEQPKLALPYLQRAVELNEN 157 (243)
T ss_dssp HHHHHTSCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHhccHHHHHHHHHHHHHhCCc
Confidence 6666666777766666666666554
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=7.8e-12 Score=130.23 Aligned_cols=106 Identities=11% Similarity=-0.024 Sum_probs=75.5
Q ss_pred hHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHH
Q 011519 374 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQ 453 (484)
Q Consensus 374 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 453 (484)
.+..+..+...|..+.+.|++++|+..|+++++++|+ ++.+++++|.+|..+|++++|+..++++++++|+++.+++++
T Consensus 53 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 131 (568)
T 2vsy_A 53 HPGHPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPE-HPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEEPYITAQL 131 (568)
T ss_dssp STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 3445566667777777777777777777777777777 677777777777777777777777777777777777777777
Q ss_pred HHHHHHc---CCHHHHHHHHHHHHhccccc
Q 011519 454 AAALFAL---GKENEAQAALREASILENKK 480 (484)
Q Consensus 454 g~~~~~~---~~~~~A~~~~~~al~l~~~~ 480 (484)
|.++..+ |++++|++.|+++++++|..
T Consensus 132 ~~~~~~~~~~g~~~~A~~~~~~al~~~p~~ 161 (568)
T 2vsy_A 132 LNWRRRLCDWRALDVLSAQVRAAVAQGVGA 161 (568)
T ss_dssp HHHHHHTTCCTTHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHhhccccHHHHHHHHHHHHhcCCcc
Confidence 7777777 77777777777777776654
|
| >4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.31 E-value=1.2e-11 Score=120.83 Aligned_cols=105 Identities=13% Similarity=0.053 Sum_probs=100.2
Q ss_pred HHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHH
Q 011519 376 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAA 455 (484)
Q Consensus 376 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 455 (484)
..+..+...|..+++.|++++|+..|+++++.+|. ++.+|+++|.++..+|++++|+..++++++++|+++.+|+.+|.
T Consensus 63 ~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~ 141 (365)
T 4eqf_A 63 KDWPGAFEEGLKRLKEGDLPVTILFMEAAILQDPG-DAEAWQFLGITQAENENEQAAIVALQRCLELQPNNLKALMALAV 141 (365)
T ss_dssp TTCTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 45667899999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 456 ALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 456 ~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
+|..+|++++|+..|+++++++|+..
T Consensus 142 ~~~~~g~~~~A~~~~~~al~~~p~~~ 167 (365)
T 4eqf_A 142 SYTNTSHQQDACEALKNWIKQNPKYK 167 (365)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCHHHH
T ss_pred HHHccccHHHHHHHHHHHHHhCccch
Confidence 99999999999999999999988643
|
| >3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A | Back alignment and structure |
|---|
Probab=99.30 E-value=2.1e-11 Score=106.00 Aligned_cols=106 Identities=12% Similarity=0.068 Sum_probs=100.4
Q ss_pred HHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHH
Q 011519 375 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQA 454 (484)
Q Consensus 375 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 454 (484)
+.....+...|..+...|++++|+..|+++++.+|. +..++.++|.++..+|++++|+..++++++.+|+++.+++.+|
T Consensus 73 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la 151 (186)
T 3as5_A 73 PDNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPI-NFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNEGKVHRAIA 151 (186)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcH-hHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccchHHHHHHH
Confidence 455677888999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 455 AALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 455 ~~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
.++..+|++++|+..|+++++++|++.
T Consensus 152 ~~~~~~~~~~~A~~~~~~~~~~~~~~~ 178 (186)
T 3as5_A 152 FSYEQMGRHEEALPHFKKANELDEGAS 178 (186)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHcCCHHHHHHHHHHHHHcCCCch
Confidence 999999999999999999999988654
|
| >2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.30 E-value=3.8e-12 Score=99.40 Aligned_cols=92 Identities=12% Similarity=0.049 Sum_probs=85.9
Q ss_pred hhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHH-HHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHH
Q 011519 381 SKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPT-AFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFA 459 (484)
Q Consensus 381 ~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~-~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~ 459 (484)
..+.|..+++.|+|++|+..|+++++.+|. ++. +|+++|.+|..+|++++|+..++++++++|++..++++
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~------- 74 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPV-GKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQAR------- 74 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSS-THHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH-------
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH-------
Confidence 467899999999999999999999999999 999 99999999999999999999999999999999999866
Q ss_pred cCCHHHHHHHHHHHHhcccccc
Q 011519 460 LGKENEAQAALREASILENKKS 481 (484)
Q Consensus 460 ~~~~~~A~~~~~~al~l~~~~~ 481 (484)
+.+.+|+..|+++++++|+..
T Consensus 75 -~~~~~a~~~~~~~~~~~p~~~ 95 (99)
T 2kc7_A 75 -KMVMDILNFYNKDMYNQLEHH 95 (99)
T ss_dssp -HHHHHHHHHHCCTTHHHHCCS
T ss_pred -HHHHHHHHHHHHHhccCcccc
Confidence 778899999999999988765
|
| >4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.30 E-value=9e-12 Score=121.70 Aligned_cols=103 Identities=18% Similarity=0.207 Sum_probs=99.4
Q ss_pred HhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHH
Q 011519 377 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAA 456 (484)
Q Consensus 377 ~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 456 (484)
.+..+...|..+...|++++|+..|+++++++|. ++.+|+++|.++..+|++++|+..++++++++|+++.+|+.+|.+
T Consensus 212 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~ 290 (365)
T 4eqf_A 212 DPDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPE-DYSLWNRLGATLANGDRSEEAVEAYTRALEIQPGFIRSRYNLGIS 290 (365)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHH
Confidence 5667889999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHHhccccc
Q 011519 457 LFALGKENEAQAALREASILENKK 480 (484)
Q Consensus 457 ~~~~~~~~~A~~~~~~al~l~~~~ 480 (484)
|..+|++++|+..|++|++++|+.
T Consensus 291 ~~~~g~~~~A~~~~~~al~~~~~~ 314 (365)
T 4eqf_A 291 CINLGAYREAVSNFLTALSLQRKS 314 (365)
T ss_dssp HHHHTCCHHHHHHHHHHHHHHHCC
T ss_pred HHHCCCHHHHHHHHHHHHHhCccc
Confidence 999999999999999999999864
|
| >2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A | Back alignment and structure |
|---|
Probab=99.29 E-value=3.6e-11 Score=98.39 Aligned_cols=101 Identities=20% Similarity=0.242 Sum_probs=95.8
Q ss_pred hhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHH
Q 011519 379 LNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALF 458 (484)
Q Consensus 379 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~ 458 (484)
..+...|..+...|++++|+..|+++++.+|. +..++.++|.++...|++++|+..++++++.+|++..+++.+|.++.
T Consensus 2 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~ 80 (136)
T 2fo7_A 2 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPR-SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYY 80 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHcCcHHHHHHHHHHHHHcCCc-chhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHH
Confidence 34677899999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHHHHhccccc
Q 011519 459 ALGKENEAQAALREASILENKK 480 (484)
Q Consensus 459 ~~~~~~~A~~~~~~al~l~~~~ 480 (484)
.+|++++|+..|+++++++|.+
T Consensus 81 ~~~~~~~A~~~~~~~~~~~~~~ 102 (136)
T 2fo7_A 81 KQGDYDEAIEYYQKALELDPRS 102 (136)
T ss_dssp TTTCHHHHHHHHHHHHHHCTTC
T ss_pred HhcCHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999988754
|
| >2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A | Back alignment and structure |
|---|
Probab=99.29 E-value=1.4e-11 Score=112.10 Aligned_cols=103 Identities=8% Similarity=0.010 Sum_probs=94.7
Q ss_pred hhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCC---HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChH---HHH
Q 011519 378 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVS---PTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHM---AAY 451 (484)
Q Consensus 378 a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~---a~~ 451 (484)
+..+...|..+++.|+|++|+..|+++++..|. + ..+++++|.+|..+|+|++|+..++++++.+|++.. ++|
T Consensus 4 ~~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~-~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~ 82 (225)
T 2yhc_A 4 PNEIYATAQQKLQDGNWRQAITQLEALDNRYPF-GPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMY 82 (225)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHH
Confidence 456888999999999999999999999999997 5 368999999999999999999999999999999875 899
Q ss_pred HHHHHHHH------------------cCCHHHHHHHHHHHHhcccccc
Q 011519 452 LQAAALFA------------------LGKENEAQAALREASILENKKS 481 (484)
Q Consensus 452 ~~g~~~~~------------------~~~~~~A~~~~~~al~l~~~~~ 481 (484)
.+|.++.. +|++++|+..|+++++.+|+..
T Consensus 83 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~ 130 (225)
T 2yhc_A 83 MRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQ 130 (225)
T ss_dssp HHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCT
T ss_pred HHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCCh
Confidence 99999986 6799999999999999998653
|
| >2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.29 E-value=1.2e-11 Score=107.87 Aligned_cols=113 Identities=12% Similarity=-0.012 Sum_probs=86.4
Q ss_pred hhHhhhhhhhHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHH-HHhcCCHHHHHHHHHHHHhcC
Q 011519 365 GAATEMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLS-YLMSDMPQEALNDASQAQVIS 443 (484)
Q Consensus 365 ~~a~e~~~~~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~-~~~~~~~~~A~~~~~~al~~~ 443 (484)
..........+.....+...|..+.+.|++++|+..|+++++.+| ++..+..++.+ +...++..+|+..++++++++
T Consensus 27 ~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p--~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~ 104 (176)
T 2r5s_A 27 NVIQTLSDELQSRGDVKLAKADCLLETKQFELAQELLATIPLEYQ--DNSYKSLIAKLELHQQAAESPELKRLEQELAAN 104 (176)
T ss_dssp HHHHTSCHHHHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC--CHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC--ChHHHHHHHHHHHHhhcccchHHHHHHHHHHhC
Confidence 333444455677888899999999999999999999988888887 34454444433 223334445788888888888
Q ss_pred CCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccc
Q 011519 444 PVWHMAAYLQAAALFALGKENEAQAALREASILENK 479 (484)
Q Consensus 444 p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 479 (484)
|+++.+++.+|.++..+|++++|+..|+++++++|+
T Consensus 105 P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~ 140 (176)
T 2r5s_A 105 PDNFELACELAVQYNQVGRDEEALELLWNILKVNLG 140 (176)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTT
T ss_pred CCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcc
Confidence 888899999999999999999999999999888875
|
| >4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.29 E-value=6.5e-12 Score=127.80 Aligned_cols=103 Identities=14% Similarity=0.063 Sum_probs=98.5
Q ss_pred hhhhhHhHHHHHhc---------cCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhc--------CCHHHHHHHHHHHH
Q 011519 378 TLNSKKKGDVAFRH---------KDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMS--------DMPQEALNDASQAQ 440 (484)
Q Consensus 378 a~~~~~~g~~~~~~---------~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~--------~~~~~A~~~~~~al 440 (484)
...+...|..+... |++++|+..|++|++++|+ ++.+|+++|.+|..+ |++++|+..+++|+
T Consensus 170 ~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al 248 (474)
T 4abn_A 170 KVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVL-DGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAE 248 (474)
T ss_dssp HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHH
Confidence 57888999999999 9999999999999999999 999999999999999 99999999999999
Q ss_pred hcCC---CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 441 VISP---VWHMAAYLQAAALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 441 ~~~p---~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
+++| +++.+|+++|.+|..+|++++|++.|++|++++|++.
T Consensus 249 ~~~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~ 292 (474)
T 4abn_A 249 KVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAWP 292 (474)
T ss_dssp HHCGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HhCCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 9999 9999999999999999999999999999999998754
|
| >3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A | Back alignment and structure |
|---|
Probab=99.28 E-value=2.9e-11 Score=105.07 Aligned_cols=105 Identities=13% Similarity=0.048 Sum_probs=99.7
Q ss_pred HHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHH
Q 011519 375 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQA 454 (484)
Q Consensus 375 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 454 (484)
+.....+...|..+...|++++|+..|+++++.+|. +..++.++|.++...|++++|+..++++++.+|+++.+++.+|
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a 117 (186)
T 3as5_A 39 AFDVDVALHLGIAYVKTGAVDRGTELLERSLADAPD-NVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLG 117 (186)
T ss_dssp SCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred ccChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHH
Confidence 445677889999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHhccccc
Q 011519 455 AALFALGKENEAQAALREASILENKK 480 (484)
Q Consensus 455 ~~~~~~~~~~~A~~~~~~al~l~~~~ 480 (484)
.++..+|++++|+..|+++++++|.+
T Consensus 118 ~~~~~~~~~~~A~~~~~~~~~~~~~~ 143 (186)
T 3as5_A 118 VALDNLGRFDEAIDSFKIALGLRPNE 143 (186)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHcCcHHHHHHHHHHHHhcCccc
Confidence 99999999999999999999998754
|
| >3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A | Back alignment and structure |
|---|
Probab=99.28 E-value=1.3e-11 Score=96.84 Aligned_cols=73 Identities=12% Similarity=0.045 Sum_probs=64.8
Q ss_pred cCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhccccc
Q 011519 407 VGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKK 480 (484)
Q Consensus 407 ~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 480 (484)
.+|+ ++.+++++|.+|..+|++++|+..++++++++|+++.+|+.+|.+|..+|++++|++.|++|+++.++.
T Consensus 2 ~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~ 74 (100)
T 3ma5_A 2 EDPE-DPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREE 74 (100)
T ss_dssp ---C-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred CCcc-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcC
Confidence 4688 899999999999999999999999999999999999999999999999999999999999999987643
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.27 E-value=2.8e-11 Score=117.02 Aligned_cols=101 Identities=15% Similarity=0.193 Sum_probs=98.2
Q ss_pred HhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHH
Q 011519 377 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAA 456 (484)
Q Consensus 377 ~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 456 (484)
++..+...|..++..|+|++|+..|+++++.+|. ++.+++++|.++..+|++++|+..++++++++|++..+++.+|.+
T Consensus 2 ~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~ 80 (359)
T 3ieg_A 2 DVEKHLELGKKLLAAGQLADALSQFHAAVDGDPD-NYIAYYRRATVFLAMGKSKAALPDLTKVIALKMDFTAARLQRGHL 80 (359)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcc-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcchHHHHHHHH
Confidence 4567889999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHHhccc
Q 011519 457 LFALGKENEAQAALREASILEN 478 (484)
Q Consensus 457 ~~~~~~~~~A~~~~~~al~l~~ 478 (484)
+..+|++++|+..|+++++++|
T Consensus 81 ~~~~~~~~~A~~~~~~~~~~~~ 102 (359)
T 3ieg_A 81 LLKQGKLDEAEDDFKKVLKSNP 102 (359)
T ss_dssp HHHHTCHHHHHHHHHHHHTSCC
T ss_pred HHHcCChHHHHHHHHHHHhcCC
Confidence 9999999999999999999988
|
| >3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A* | Back alignment and structure |
|---|
Probab=99.27 E-value=2.9e-11 Score=114.46 Aligned_cols=103 Identities=11% Similarity=0.005 Sum_probs=88.7
Q ss_pred HhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHH---------------------
Q 011519 377 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALND--------------------- 435 (484)
Q Consensus 377 ~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~--------------------- 435 (484)
....+...|..+.+.|++++|+..|+++++.+|+ ++.+++++|.++..+|++++|+..
T Consensus 116 ~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~ 194 (287)
T 3qou_A 116 EEELXAQQAMQLMQESNYTDALPLLXDAWQLSNQ-NGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVAQIE 194 (287)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTS-CHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHHHHH
T ss_pred chhhHHHHHHHHHhCCCHHHHHHHHHHHHHhCCc-chhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHHHHH
Confidence 4456677888888888888888888888888888 888888888888888888877644
Q ss_pred -------------HHHHHhcCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhccccc
Q 011519 436 -------------ASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKK 480 (484)
Q Consensus 436 -------------~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 480 (484)
++++++++|+++.+++++|.+|..+|++++|+..|+++++++|..
T Consensus 195 l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~ 252 (287)
T 3qou_A 195 LLXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTA 252 (287)
T ss_dssp HHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTG
T ss_pred HHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhccccc
Confidence 455577899999999999999999999999999999999999865
|
| >2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A | Back alignment and structure |
|---|
Probab=99.27 E-value=5.1e-11 Score=109.68 Aligned_cols=106 Identities=9% Similarity=-0.006 Sum_probs=92.0
Q ss_pred hHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHh--cCCCChHHHH
Q 011519 374 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQV--ISPVWHMAAY 451 (484)
Q Consensus 374 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~--~~p~~~~a~~ 451 (484)
.+.....+...|..+...|++++|+..|+++++.+|. +..++.++|.++..+|++++|+..++++++ .+|.++.+++
T Consensus 67 ~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~ 145 (252)
T 2ho1_A 67 DPSSADAHAALAVVFQTEMEPKLADEEYRKALASDSR-NARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFE 145 (252)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHH
T ss_pred CCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcC-cHHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcccHHHHH
Confidence 3455677888888899999999999999999999988 888899999999999999999999999988 8888888999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhccccc
Q 011519 452 LQAAALFALGKENEAQAALREASILENKK 480 (484)
Q Consensus 452 ~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 480 (484)
.+|.++..+|++++|+..|+++++++|.+
T Consensus 146 ~la~~~~~~g~~~~A~~~~~~~~~~~~~~ 174 (252)
T 2ho1_A 146 NLGLVSLQMKKPAQAKEYFEKSLRLNRNQ 174 (252)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCSCC
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhcCccc
Confidence 99999999999999999999998887654
|
| >3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus} | Back alignment and structure |
|---|
Probab=99.27 E-value=1.5e-11 Score=114.40 Aligned_cols=103 Identities=13% Similarity=0.080 Sum_probs=95.8
Q ss_pred hhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCC--CCHHHHHHHHHHHHh--------cCCHHHHHHHHHHHHhcCCCCh
Q 011519 378 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTM--VSPTAFARRSLSYLM--------SDMPQEALNDASQAQVISPVWH 447 (484)
Q Consensus 378 a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~--~~~~~~~~~a~~~~~--------~~~~~~A~~~~~~al~~~p~~~ 447 (484)
...+...|..+++.|+|++|+..|+++++..|+ ..+.+++++|.++.. +|++++|+..++++++.+|++.
T Consensus 52 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~ 131 (261)
T 3qky_A 52 ADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHE 131 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCT
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCch
Confidence 778999999999999999999999999999885 135689999999999 9999999999999999999987
Q ss_pred HHH-----------------HHHHHHHHHcCCHHHHHHHHHHHHhccccc
Q 011519 448 MAA-----------------YLQAAALFALGKENEAQAALREASILENKK 480 (484)
Q Consensus 448 ~a~-----------------~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 480 (484)
.++ +.+|.+|..+|++++|+..|+++++.+|+.
T Consensus 132 ~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~ 181 (261)
T 3qky_A 132 LVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDT 181 (261)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCC
Confidence 777 899999999999999999999999998864
|
| >2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A* | Back alignment and structure |
|---|
Probab=99.27 E-value=4.4e-12 Score=107.44 Aligned_cols=84 Identities=8% Similarity=-0.040 Sum_probs=79.6
Q ss_pred HHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Q 011519 397 SIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASIL 476 (484)
Q Consensus 397 A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l 476 (484)
+-..|+++++++|. +..+++++|.++...|+|++|+..+.++++++|+++.+|+.+|.+|..+|++++|+..|++|+++
T Consensus 6 ~~~~~~~al~~~p~-~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l 84 (148)
T 2vgx_A 6 GGGTIAMLNEISSD-TLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVM 84 (148)
T ss_dssp CCCSHHHHTTCCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHcCCHh-hHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 34568999999999 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccc
Q 011519 477 ENKKS 481 (484)
Q Consensus 477 ~~~~~ 481 (484)
+|++.
T Consensus 85 ~p~~~ 89 (148)
T 2vgx_A 85 DIXEP 89 (148)
T ss_dssp STTCT
T ss_pred CCCCc
Confidence 98764
|
| >1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A | Back alignment and structure |
|---|
Probab=99.26 E-value=5.1e-11 Score=90.98 Aligned_cols=85 Identities=16% Similarity=0.179 Sum_probs=80.2
Q ss_pred HHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHH
Q 011519 376 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAA 455 (484)
Q Consensus 376 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 455 (484)
..+..+...|..++..|++++|+..|+++++.+|. ++.+++++|.++..+|++++|+..++++++++|+++.+++++|.
T Consensus 7 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~ 85 (91)
T 1na3_A 7 NSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN-NAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGN 85 (91)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 45667888999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcC
Q 011519 456 ALFALG 461 (484)
Q Consensus 456 ~~~~~~ 461 (484)
++..+|
T Consensus 86 ~~~~~g 91 (91)
T 1na3_A 86 AKQKQG 91 (91)
T ss_dssp HHHHHC
T ss_pred HHHhcC
Confidence 998765
|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.26 E-value=3.9e-11 Score=122.37 Aligned_cols=104 Identities=21% Similarity=0.264 Sum_probs=99.2
Q ss_pred HHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHH
Q 011519 375 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQA 454 (484)
Q Consensus 375 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 454 (484)
...+..+...|..+++.|+|++|+..|+++++.+|+ +.+|.++|.++..+|++++|+..++++++++|+++.+|+.+|
T Consensus 3 ~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~--~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~ 80 (514)
T 2gw1_A 3 DKYALALKDKGNQFFRNKKYDDAIKYYNWALELKED--PVFYSNLSACYVSVGDLKKVVEMSTKALELKPDYSKVLLRRA 80 (514)
T ss_dssp HHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCCC--HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSCCHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcc--HHHHHhHHHHHHHHhhHHHHHHHHHHHhccChHHHHHHHHHH
Confidence 467888999999999999999999999999999986 889999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHhccccc
Q 011519 455 AALFALGKENEAQAALREASILENKK 480 (484)
Q Consensus 455 ~~~~~~~~~~~A~~~~~~al~l~~~~ 480 (484)
.+|..+|++++|+..|+++++++|.+
T Consensus 81 ~~~~~~g~~~~A~~~~~~~~~~~~~~ 106 (514)
T 2gw1_A 81 SANEGLGKFADAMFDLSVLSLNGDFN 106 (514)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHSSSCC
T ss_pred HHHHHHhhHHHHHHHHHHHHhcCCCc
Confidence 99999999999999999999998743
|
| >1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A | Back alignment and structure |
|---|
Probab=99.25 E-value=2.9e-11 Score=117.85 Aligned_cols=103 Identities=16% Similarity=0.200 Sum_probs=99.6
Q ss_pred HhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHH
Q 011519 377 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAA 456 (484)
Q Consensus 377 ~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 456 (484)
.+..+...|..+.+.|++++|+..|+++++++|. ++.+|+++|.++..+|++++|+..++++++++|+++.+++.+|.+
T Consensus 216 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~ 294 (368)
T 1fch_A 216 DPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPN-DYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGIS 294 (368)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 5677889999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHHhccccc
Q 011519 457 LFALGKENEAQAALREASILENKK 480 (484)
Q Consensus 457 ~~~~~~~~~A~~~~~~al~l~~~~ 480 (484)
|..+|++++|+..|+++++++|+.
T Consensus 295 ~~~~g~~~~A~~~~~~al~~~~~~ 318 (368)
T 1fch_A 295 CINLGAHREAVEHFLEALNMQRKS 318 (368)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHHTC
T ss_pred HHHCCCHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999998865
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=99.25 E-value=2.6e-11 Score=118.66 Aligned_cols=145 Identities=14% Similarity=0.139 Sum_probs=108.8
Q ss_pred CCcccccccCCCCCCceEEEEEeCCCcEEEEEEec--CCCC-ccHHHHHHHHHHHhcCC--CCceeeeeeeeeeC---Cc
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFN--RSAW-PDARQFLEEARAVGQLR--NRRLANLLGCCCEG---DE 127 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~--~~~~-~~~~~~~~E~~~l~~l~--hpniv~l~~~~~~~---~~ 127 (484)
+.....++.++.|.++.||+....+ ..+++|+.. .... .....+.+|+.+++.+. +..+++++.++.+. +.
T Consensus 37 ~~~~~~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~ 115 (359)
T 3dxp_A 37 FAGPLSVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGR 115 (359)
T ss_dssp CCCCCEEEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSS
T ss_pred CCCCceEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCC
Confidence 3334456778999999999998755 578889876 3321 22346788999999986 45688888888766 45
Q ss_pred eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcC---------------------------------
Q 011519 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK--------------------------------- 174 (484)
Q Consensus 128 ~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~--------------------------------- 174 (484)
.|+||||++|.++.+.. -..++..+...++.+++..|..||+.
T Consensus 116 ~~~vme~v~G~~l~~~~----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (359)
T 3dxp_A 116 AFYIMEFVSGRVLWDQS----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSET 191 (359)
T ss_dssp CEEEEECCCCBCCCCTT----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCC
T ss_pred eEEEEEecCCeecCCCc----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCC
Confidence 89999999998775422 12478888999999999999999972
Q ss_pred ------------------------CCcccccccccceeecCCCC--ceeeccCCccc
Q 011519 175 ------------------------ERALYHDLNAYRIVFDDDVN--PRLSCFGLMKN 205 (484)
Q Consensus 175 ------------------------~~ivH~Dlkp~Nill~~~~~--~kl~DfG~a~~ 205 (484)
..++|+|++|.|||++.++. +.|+||+.+..
T Consensus 192 ~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 192 ESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp SCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred cCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 36899999999999997653 68999998754
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A | Back alignment and structure |
|---|
Probab=99.25 E-value=4.3e-11 Score=120.12 Aligned_cols=107 Identities=15% Similarity=0.192 Sum_probs=101.6
Q ss_pred hhHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHH
Q 011519 373 GQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYL 452 (484)
Q Consensus 373 ~~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~ 452 (484)
..+.++..+...|..+++.|+|++|+..|+++++.+|. ++.+|+++|.++..+|++++|+..++++++++|+++.+++.
T Consensus 21 ~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~ 99 (450)
T 2y4t_A 21 QSMADVEKHLELGKKLLAAGQLADALSQFHAAVDGDPD-NYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQ 99 (450)
T ss_dssp --CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHH
Confidence 34677888999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHhccccc
Q 011519 453 QAAALFALGKENEAQAALREASILENKK 480 (484)
Q Consensus 453 ~g~~~~~~~~~~~A~~~~~~al~l~~~~ 480 (484)
+|.+|..+|++++|+..|+++++++|++
T Consensus 100 l~~~~~~~g~~~~A~~~~~~~~~~~~~~ 127 (450)
T 2y4t_A 100 RGHLLLKQGKLDEAEDDFKKVLKSNPSE 127 (450)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTSCCCH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHhcCCCC
Confidence 9999999999999999999999998864
|
| >2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1 | Back alignment and structure |
|---|
Probab=99.25 E-value=3.2e-11 Score=110.06 Aligned_cols=106 Identities=13% Similarity=0.066 Sum_probs=100.1
Q ss_pred HHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHH
Q 011519 375 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQA 454 (484)
Q Consensus 375 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 454 (484)
+.....+...|..+.+.|++++|+..|+++++.+|. +..++.++|.++...|++++|+..++++++.+|+++.+++.+|
T Consensus 122 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la 200 (243)
T 2q7f_A 122 MENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNEN-DTEARFQFGMCLANEGMLDEALSQFAAVTEQDPGHADAFYNAG 200 (243)
T ss_dssp CCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHH
Confidence 345667888999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 455 AALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 455 ~~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
.+|..+|++++|+..|+++++++|++.
T Consensus 201 ~~~~~~~~~~~A~~~~~~~~~~~p~~~ 227 (243)
T 2q7f_A 201 VTYAYKENREKALEMLDKAIDIQPDHM 227 (243)
T ss_dssp HHHHHTTCTTHHHHHHHHHHHHCTTCH
T ss_pred HHHHHccCHHHHHHHHHHHHccCcchH
Confidence 999999999999999999999998653
|
| >1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A | Back alignment and structure |
|---|
Probab=99.24 E-value=3.2e-11 Score=116.89 Aligned_cols=98 Identities=12% Similarity=0.067 Sum_probs=93.0
Q ss_pred hhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 011519 378 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAAL 457 (484)
Q Consensus 378 a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 457 (484)
+..+.+.|..+++.|+|++|+..|++||+++|+ ++.+|+++|.+|..+|++++|+.++++|++++|++..+++.+|.++
T Consensus 196 ~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~ 274 (336)
T 1p5q_A 196 LASHLNLAMCHLKLQAFSAAIESCNKALELDSN-NEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQ 274 (336)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
Confidence 678899999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHH-HHHHHHHHhc
Q 011519 458 FALGKENEA-QAALREASIL 476 (484)
Q Consensus 458 ~~~~~~~~A-~~~~~~al~l 476 (484)
..+|++++| ...|++++..
T Consensus 275 ~~~~~~~~a~~~~~~~~~~~ 294 (336)
T 1p5q_A 275 QRIRRQLAREKKLYANMFER 294 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 999999999 4567777654
|
| >4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.24 E-value=1.8e-11 Score=124.56 Aligned_cols=105 Identities=11% Similarity=-0.015 Sum_probs=100.3
Q ss_pred HHHhhhhhHhHHHHHhccCH-HHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHH
Q 011519 375 MQETLNSKKKGDVAFRHKDF-RASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQ 453 (484)
Q Consensus 375 ~~~a~~~~~~g~~~~~~~~~-~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 453 (484)
...+..+...|..++..|+| ++|+..|++|++++|. ++.+|+++|.+|..+|++++|+..+++|++++|+ ..+++++
T Consensus 99 ~~~a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~l 176 (474)
T 4abn_A 99 QVEAQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPE-LVEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKN-KVSLQNL 176 (474)
T ss_dssp CCCHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCCC-HHHHHHH
T ss_pred chhHHHHHHHHHHHHhccccHHHHHHHHHHHHhhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-HHHHHHH
Confidence 45677899999999999999 9999999999999999 9999999999999999999999999999999999 7999999
Q ss_pred HHHHHHc---------CCHHHHHHHHHHHHhcccccc
Q 011519 454 AAALFAL---------GKENEAQAALREASILENKKS 481 (484)
Q Consensus 454 g~~~~~~---------~~~~~A~~~~~~al~l~~~~~ 481 (484)
|.+|..+ |++++|++.|++|++++|++.
T Consensus 177 g~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~ 213 (474)
T 4abn_A 177 SMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLDG 213 (474)
T ss_dssp HHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCCH
Confidence 9999999 999999999999999998753
|
| >1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.24 E-value=3.7e-11 Score=118.39 Aligned_cols=106 Identities=15% Similarity=0.070 Sum_probs=92.5
Q ss_pred hHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHH
Q 011519 374 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQ 453 (484)
Q Consensus 374 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 453 (484)
.+..+..+...|..+.+.|++++|+..|+++++++|+ +..+|.++|.++...|++++|+..+.++++++|++..++..+
T Consensus 63 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 141 (388)
T 1w3b_A 63 NPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPD-FIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDL 141 (388)
T ss_dssp CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHSCSSHHHHHHHHHHHHCTTCTHHHHHH
T ss_pred CCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCcc-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHH
Confidence 4556677888888888899999999999999999988 888888999999999999999999999999999999899999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHhccccc
Q 011519 454 AAALFALGKENEAQAALREASILENKK 480 (484)
Q Consensus 454 g~~~~~~~~~~~A~~~~~~al~l~~~~ 480 (484)
|.++..+|++++|++.|+++++++|..
T Consensus 142 ~~~~~~~g~~~~A~~~~~~al~~~p~~ 168 (388)
T 1w3b_A 142 GNLLKALGRLEEAKACYLKAIETQPNF 168 (388)
T ss_dssp HHHHHTTSCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHccCHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999998888764
|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
Probab=99.24 E-value=4.6e-11 Score=124.34 Aligned_cols=107 Identities=21% Similarity=0.069 Sum_probs=101.0
Q ss_pred hHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHH
Q 011519 374 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQ 453 (484)
Q Consensus 374 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 453 (484)
.+..+..+...|..+++.|++++|+..|+++++++|+ ++.+++++|.+|..+|++++|+..++++++++|+++.+|+++
T Consensus 19 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 97 (568)
T 2vsy_A 19 RPQDFVAWLMLADAELGMGDTTAGEMAVQRGLALHPG-HPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIALWL 97 (568)
T ss_dssp --CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 4556778999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 454 AAALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 454 g~~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
|.+|..+|++++|++.|+++++++|++.
T Consensus 98 a~~~~~~g~~~~A~~~~~~al~~~p~~~ 125 (568)
T 2vsy_A 98 GHALEDAGQAEAAAAAYTRAHQLLPEEP 125 (568)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 9999999999999999999999998653
|
| >1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A | Back alignment and structure |
|---|
Probab=99.24 E-value=5.9e-11 Score=115.63 Aligned_cols=104 Identities=10% Similarity=0.044 Sum_probs=99.2
Q ss_pred HhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHH
Q 011519 377 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAA 456 (484)
Q Consensus 377 ~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 456 (484)
.+..+...|..+++.|++++|+..|+++++.+|. +..+++++|.++..+|++++|+..++++++++|+++.+++.+|.+
T Consensus 63 ~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~ 141 (368)
T 1fch_A 63 DHPQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPK-HMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVS 141 (368)
T ss_dssp TCSSHHHHHHHHHHTTCHHHHHHHHHHHHHSCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHCcCHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence 3566788999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHHhcccccc
Q 011519 457 LFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 457 ~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
|..+|++++|+..|+++++++|+..
T Consensus 142 ~~~~g~~~~A~~~~~~~~~~~~~~~ 166 (368)
T 1fch_A 142 FTNESLQRQACEILRDWLRYTPAYA 166 (368)
T ss_dssp HHHTTCHHHHHHHHHHHHHTSTTTG
T ss_pred HHHcCCHHHHHHHHHHHHHhCcCcH
Confidence 9999999999999999999988654
|
| >3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.23 E-value=4.4e-11 Score=110.01 Aligned_cols=101 Identities=13% Similarity=0.114 Sum_probs=96.2
Q ss_pred HHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCC-------hH
Q 011519 376 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVW-------HM 448 (484)
Q Consensus 376 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~-------~~ 448 (484)
..+..+...|..++..|+|++|+..|+++++.+ . ++.++.++|.++..+|++++|+..++++++++|++ +.
T Consensus 3 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~-~-~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~ 80 (258)
T 3uq3_A 3 SMADKEKAEGNKFYKARQFDEAIEHYNKAWELH-K-DITYLNNRAAAEYEKGEYETAISTLNDAVEQGREMRADYKVISK 80 (258)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-C-CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred hHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhh-c-cHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccccchHHHHH
Confidence 567889999999999999999999999999999 7 89999999999999999999999999999999987 79
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhccc
Q 011519 449 AAYLQAAALFALGKENEAQAALREASILEN 478 (484)
Q Consensus 449 a~~~~g~~~~~~~~~~~A~~~~~~al~l~~ 478 (484)
+|+.+|.++..+|++++|+..|+++++++|
T Consensus 81 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~ 110 (258)
T 3uq3_A 81 SFARIGNAYHKLGDLKKTIEYYQKSLTEHR 110 (258)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHhcCc
Confidence 999999999999999999999999999765
|
| >1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.23 E-value=3.6e-11 Score=118.50 Aligned_cols=105 Identities=14% Similarity=0.047 Sum_probs=94.9
Q ss_pred HHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHH
Q 011519 375 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQA 454 (484)
Q Consensus 375 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 454 (484)
+.....+...|..+.+.|++++|+..|+++++++|. ++.++.++|.++...|++++|+..++++++++|+++.+++.+|
T Consensus 268 p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~ 346 (388)
T 1w3b_A 268 PHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT-HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLA 346 (388)
T ss_dssp SSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSCTTCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcc-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 445567888899999999999999999999999999 8999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHhccccc
Q 011519 455 AALFALGKENEAQAALREASILENKK 480 (484)
Q Consensus 455 ~~~~~~~~~~~A~~~~~~al~l~~~~ 480 (484)
.+|..+|++++|+..|+++++++|+.
T Consensus 347 ~~~~~~g~~~~A~~~~~~a~~~~p~~ 372 (388)
T 1w3b_A 347 SVLQQQGKLQEALMHYKEAIRISPTF 372 (388)
T ss_dssp HHHHTTTCCHHHHHHHHHHHTTCTTC
T ss_pred HHHHHcCCHHHHHHHHHHHHhhCCCC
Confidence 99999999999999999999998864
|
| >3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.23 E-value=6.7e-11 Score=112.16 Aligned_cols=92 Identities=9% Similarity=-0.036 Sum_probs=86.3
Q ss_pred HhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHcCCHHH-HH
Q 011519 389 FRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENE-AQ 467 (484)
Q Consensus 389 ~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~-A~ 467 (484)
...|++++|+..|+++++.+|. ++.+|+++|.++..+|++++|+..++++++++|+++.+++++|.++..+|++++ |.
T Consensus 177 ~~~~~~~eA~~~~~~~l~~~p~-~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~~eaa~ 255 (291)
T 3mkr_A 177 AGGEKLQDAYYIFQEMADKCSP-TLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGKPPEVTN 255 (291)
T ss_dssp HCTTHHHHHHHHHHHHHHHSCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHH
T ss_pred hCchHHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCHHHHH
Confidence 3558999999999999999999 999999999999999999999999999999999999999999999999999987 46
Q ss_pred HHHHHHHhcccccc
Q 011519 468 AALREASILENKKS 481 (484)
Q Consensus 468 ~~~~~al~l~~~~~ 481 (484)
+.++++++++|++.
T Consensus 256 ~~~~~~~~~~P~~~ 269 (291)
T 3mkr_A 256 RYLSQLKDAHRSHP 269 (291)
T ss_dssp HHHHHHHHHCTTCH
T ss_pred HHHHHHHHhCCCCh
Confidence 78899999998753
|
| >3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A | Back alignment and structure |
|---|
Probab=99.23 E-value=3.2e-11 Score=123.94 Aligned_cols=104 Identities=21% Similarity=0.268 Sum_probs=95.0
Q ss_pred HHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHH
Q 011519 375 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQA 454 (484)
Q Consensus 375 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 454 (484)
...+..+...|..+++.|+|++|+..|+++++.+|+ ++.+|+++|.+|..+|++++|+..++++++++|+++.+++.+|
T Consensus 22 ~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la 100 (537)
T 3fp2_A 22 QAYAVQLKNRGNHFFTAKNFNEAIKYYQYAIELDPN-EPVFYSNISACYISTGDLEKVIEFTTKALEIKPDHSKALLRRA 100 (537)
T ss_dssp HHHHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhCCC-CcHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCchHHHHHHHH
Confidence 457889999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHhccccc
Q 011519 455 AALFALGKENEAQAALREASILENKK 480 (484)
Q Consensus 455 ~~~~~~~~~~~A~~~~~~al~l~~~~ 480 (484)
.++..+|++++|+..|+ ++.++|+.
T Consensus 101 ~~~~~~g~~~~A~~~~~-~~~~~~~~ 125 (537)
T 3fp2_A 101 SANESLGNFTDAMFDLS-VLSLNGDF 125 (537)
T ss_dssp HHHHHHTCHHHHHHHHH-HHC-----
T ss_pred HHHHHcCCHHHHHHHHH-HHhcCCCC
Confidence 99999999999999996 88887754
|
| >3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.23 E-value=1.6e-10 Score=110.40 Aligned_cols=105 Identities=13% Similarity=-0.010 Sum_probs=96.4
Q ss_pred hHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHH
Q 011519 374 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQ 453 (484)
Q Consensus 374 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 453 (484)
.+.....+...|..+...|++++|+..|+++++..|. +..++.++|.++..+|++++|+..++++++++|+++.+++.+
T Consensus 121 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l 199 (330)
T 3hym_B 121 EKTYGPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKG-CHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEV 199 (330)
T ss_dssp CTTCTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTT-CSHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhccc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCChHHHHHH
Confidence 4556777889999999999999999999999999999 888999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHhcccc
Q 011519 454 AAALFALGKENEAQAALREASILENK 479 (484)
Q Consensus 454 g~~~~~~~~~~~A~~~~~~al~l~~~ 479 (484)
|.++..+|++++|+..|++++++.++
T Consensus 200 ~~~~~~~~~~~~A~~~~~~a~~~~~~ 225 (330)
T 3hym_B 200 GVVAFQNGEWKTAEKWFLDALEKIKA 225 (330)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHcccHHHHHHHHHHHHHHhhh
Confidence 99999999999999999999998754
|
| >2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.22 E-value=1.1e-10 Score=95.67 Aligned_cols=90 Identities=9% Similarity=0.042 Sum_probs=84.0
Q ss_pred hhhHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHH
Q 011519 372 TGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAY 451 (484)
Q Consensus 372 ~~~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~ 451 (484)
...+.....+...|..++..|++++|+..|+++++.+|. ++.+++++|.++..+|++++|+..++++++++|++..+++
T Consensus 44 ~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~ 122 (133)
T 2lni_A 44 KRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPT-FIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAAD 122 (133)
T ss_dssp TTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGTHHHH
T ss_pred HcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-chHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCchHHHH
Confidence 334556778999999999999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCC
Q 011519 452 LQAAALFALGK 462 (484)
Q Consensus 452 ~~g~~~~~~~~ 462 (484)
.+|.++..+|+
T Consensus 123 ~l~~~~~~~~~ 133 (133)
T 2lni_A 123 GYQRCMMAQYN 133 (133)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHhcC
Confidence 99999998774
|
| >2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.22 E-value=3.7e-12 Score=111.00 Aligned_cols=101 Identities=12% Similarity=0.069 Sum_probs=88.8
Q ss_pred hhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHH-HH
Q 011519 380 NSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAA-LF 458 (484)
Q Consensus 380 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~-~~ 458 (484)
.+...+..+...|++++|+..|+++++.+|. ++.+|+++|.+|...|++++|+..++++++++|+++.+++.+|.+ +.
T Consensus 12 ~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~ 90 (177)
T 2e2e_A 12 RQRDPLHQFASQQNPEAQLQALQDKIRANPQ-NSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYY 90 (177)
T ss_dssp CSSTTTCCCC-----CCCCHHHHHHHHHCCS-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHH
T ss_pred HHhhhhhhhhhccCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH
Confidence 3445556677889999999999999999999 999999999999999999999999999999999999999999999 88
Q ss_pred HcCCH--HHHHHHHHHHHhcccccc
Q 011519 459 ALGKE--NEAQAALREASILENKKS 481 (484)
Q Consensus 459 ~~~~~--~~A~~~~~~al~l~~~~~ 481 (484)
..|++ ++|+..|+++++++|.+.
T Consensus 91 ~~~~~~~~~A~~~~~~al~~~p~~~ 115 (177)
T 2e2e_A 91 QASQHMTAQTRAMIDKALALDSNEI 115 (177)
T ss_dssp HTTTCCCHHHHHHHHHHHHHCTTCH
T ss_pred hcCCcchHHHHHHHHHHHHhCCCcH
Confidence 99999 999999999999998653
|
| >1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A | Back alignment and structure |
|---|
Probab=99.22 E-value=7.1e-11 Score=101.00 Aligned_cols=103 Identities=13% Similarity=0.051 Sum_probs=94.1
Q ss_pred hHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHH
Q 011519 374 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQ 453 (484)
Q Consensus 374 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 453 (484)
.+.....+...|..+...|+|++|+..|+++++++|. ++.+++++|.++..+|++++|+..++++++++|++..++..+
T Consensus 43 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~ 121 (166)
T 1a17_A 43 NPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKK-YIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKY 121 (166)
T ss_dssp STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 3456778899999999999999999999999999999 999999999999999999999999999999999999999555
Q ss_pred HHH--HHHcCCHHHHHHHHHHHHhcc
Q 011519 454 AAA--LFALGKENEAQAALREASILE 477 (484)
Q Consensus 454 g~~--~~~~~~~~~A~~~~~~al~l~ 477 (484)
+.+ +..+|++++|++.+.++..+-
T Consensus 122 ~~~~~~~~~~~~~~A~~~~~~~~~~~ 147 (166)
T 1a17_A 122 QECNKIVKQKAFERAIAGDEHKRSVV 147 (166)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcccchHHHh
Confidence 554 889999999999999988764
|
| >3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.21 E-value=7.6e-11 Score=109.74 Aligned_cols=98 Identities=10% Similarity=0.037 Sum_probs=48.5
Q ss_pred hhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHc
Q 011519 381 SKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFAL 460 (484)
Q Consensus 381 ~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~ 460 (484)
+...|..+...|++++|+..|+++++++|. ++.++.++|.++..+|++++|+..++++++++|+++.+++.+|...+..
T Consensus 77 ~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~ 155 (272)
T 3u4t_A 77 FEYYGKILMKKGQDSLAIQQYQAAVDRDTT-RLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDPKVFYELGQAYYYN 155 (272)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHhcCcc-cHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHH
Confidence 344455555555555555555555555555 4445555555555555555555555555555555555555555222233
Q ss_pred CCHHHHHHHHHHHHhcccc
Q 011519 461 GKENEAQAALREASILENK 479 (484)
Q Consensus 461 ~~~~~A~~~~~~al~l~~~ 479 (484)
+++++|++.|+++++++|+
T Consensus 156 ~~~~~A~~~~~~a~~~~p~ 174 (272)
T 3u4t_A 156 KEYVKADSSFVKVLELKPN 174 (272)
T ss_dssp TCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHHHHHhCcc
Confidence 3555555555555554443
|
| >3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.21 E-value=2.2e-11 Score=113.42 Aligned_cols=107 Identities=5% Similarity=-0.035 Sum_probs=95.9
Q ss_pred hhHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCC---CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHH
Q 011519 373 GQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTM---VSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMA 449 (484)
Q Consensus 373 ~~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~---~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a 449 (484)
..+.....+...|..++..|++++|+..|+++++ .|. ....+|.++|.++..+|++++|+..++++++++|+++.+
T Consensus 32 ~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~-~~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~~ 110 (272)
T 3u4t_A 32 KKYNSPYIYNRRAVCYYELAKYDLAQKDIETYFS-KVNATKAKSADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRLDM 110 (272)
T ss_dssp TTCCCSTTHHHHHHHHHHTTCHHHHHHHHHHHHT-TSCTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHH
T ss_pred hCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHh-ccCchhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcccHHH
Confidence 3445666889999999999999999999999999 443 224569999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhccccc
Q 011519 450 AYLQAAALFALGKENEAQAALREASILENKK 480 (484)
Q Consensus 450 ~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 480 (484)
++.+|.+|..+|++++|+..|+++++++|.+
T Consensus 111 ~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~ 141 (272)
T 3u4t_A 111 YGQIGSYFYNKGNFPLAIQYMEKQIRPTTTD 141 (272)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHGGGCCSSCCC
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHhhcCCCc
Confidence 9999999999999999999999999998764
|
| >2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis} | Back alignment and structure |
|---|
Probab=99.20 E-value=1.4e-10 Score=104.23 Aligned_cols=106 Identities=13% Similarity=0.035 Sum_probs=96.1
Q ss_pred hHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhc-CCHHHHHHHHHHHHh--cCCCChHHH
Q 011519 374 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMS-DMPQEALNDASQAQV--ISPVWHMAA 450 (484)
Q Consensus 374 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~-~~~~~A~~~~~~al~--~~p~~~~a~ 450 (484)
.+.....+...|..+...|++++|+..|+++++.+|. +..++.++|.++... |++++|+..++++++ .+|.+..++
T Consensus 38 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~ 116 (225)
T 2vq2_A 38 DPKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPD-SAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIAN 116 (225)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHH
T ss_pred CccchHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHH
Confidence 3455678888999999999999999999999999999 899999999999999 999999999999999 777788999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhccccc
Q 011519 451 YLQAAALFALGKENEAQAALREASILENKK 480 (484)
Q Consensus 451 ~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 480 (484)
+.+|.++..+|++++|+..|+++++++|.+
T Consensus 117 ~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~ 146 (225)
T 2vq2_A 117 LNKGICSAKQGQFGLAEAYLKRSLAAQPQF 146 (225)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999999988764
|
| >3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans} | Back alignment and structure |
|---|
Probab=99.20 E-value=2.3e-10 Score=108.49 Aligned_cols=128 Identities=8% Similarity=-0.032 Sum_probs=110.2
Q ss_pred HHHHHhCCcCchhhHhh-hhhhhHHHhhhhhHhHHHHHhcc--CHHHHHHHHHHHHhcCCCCCHHHHHHHHHHH----Hh
Q 011519 353 EILEKLGYKDDEGAATE-MWTGQMQETLNSKKKGDVAFRHK--DFRASIECYTQFIDVGTMVSPTAFARRSLSY----LM 425 (484)
Q Consensus 353 e~l~~~~y~~~~~~a~e-~~~~~~~~a~~~~~~g~~~~~~~--~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~----~~ 425 (484)
..++...+.++.....+ ...-++.....|..+|..+...+ ++++|+..++++|..+|+ +..+|++|+.++ ..
T Consensus 41 a~~~~~e~s~~aL~~t~~~L~~nP~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk-~y~aW~~R~~iL~~~~~~ 119 (306)
T 3dra_A 41 ALMKAEEYSERALHITELGINELASHYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEK-NYQIWNYRQLIIGQIMEL 119 (306)
T ss_dssp HHHHTTCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTT-CCHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCCCHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcc-cHHHHHHHHHHHHHHHHh
Confidence 33444445444333332 33446788889999999999999 999999999999999999 999999999999 77
Q ss_pred c---CCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHcCCHH--HHHHHHHHHHhcccccc
Q 011519 426 S---DMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKEN--EAQAALREASILENKKS 481 (484)
Q Consensus 426 ~---~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~--~A~~~~~~al~l~~~~~ 481 (484)
+ +++++++..++++++.+|.+..+|++|+.++..+++++ ++++.+.+++++||++.
T Consensus 120 l~~~~~~~~EL~~~~~~l~~~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~ 180 (306)
T 3dra_A 120 NNNDFDPYREFDILEAMLSSDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNN 180 (306)
T ss_dssp TTTCCCTHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCH
T ss_pred ccccCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCH
Confidence 7 89999999999999999999999999999999999999 99999999999998764
|
| >2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis} | Back alignment and structure |
|---|
Probab=99.19 E-value=1.4e-10 Score=104.18 Aligned_cols=105 Identities=9% Similarity=-0.045 Sum_probs=96.6
Q ss_pred HHHhhhhhHhHHHHHhc-cCHHHHHHHHHHHHh--cCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHH
Q 011519 375 MQETLNSKKKGDVAFRH-KDFRASIECYTQFID--VGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAY 451 (484)
Q Consensus 375 ~~~a~~~~~~g~~~~~~-~~~~~A~~~~~~ai~--~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~ 451 (484)
+.....+...|..+... |++++|+..|+++++ ..|. +..++.++|.++..+|++++|+..++++++.+|+++.+++
T Consensus 73 ~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 151 (225)
T 2vq2_A 73 PDSAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPT-PYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFK 151 (225)
T ss_dssp TTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSC-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHH
T ss_pred CCChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcc-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHH
Confidence 44566788899999999 999999999999999 5666 6889999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhccc-cc
Q 011519 452 LQAAALFALGKENEAQAALREASILEN-KK 480 (484)
Q Consensus 452 ~~g~~~~~~~~~~~A~~~~~~al~l~~-~~ 480 (484)
.+|.++..+|++++|+..|+++++++| ..
T Consensus 152 ~la~~~~~~~~~~~A~~~~~~~~~~~~~~~ 181 (225)
T 2vq2_A 152 ELARTKMLAGQLGDADYYFKKYQSRVEVLQ 181 (225)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHCSCC
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCC
Confidence 999999999999999999999999988 43
|
| >3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A | Back alignment and structure |
|---|
Probab=99.18 E-value=1.2e-10 Score=111.04 Aligned_cols=104 Identities=13% Similarity=0.143 Sum_probs=99.6
Q ss_pred HHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHH
Q 011519 375 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQA 454 (484)
Q Consensus 375 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 454 (484)
+.....+...|..+.+.|++++|+..|+++++.+|. ++.++.++|.++..+|++++|+..++++++++|+++.+++.+|
T Consensus 169 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~ 247 (327)
T 3cv0_A 169 PNDAQLHASLGVLYNLSNNYDSAAANLRRAVELRPD-DAQLWNKLGATLANGNRPQEALDAYNRALDINPGYVRVMYNMA 247 (327)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHH
Confidence 345677889999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHhcccc
Q 011519 455 AALFALGKENEAQAALREASILENK 479 (484)
Q Consensus 455 ~~~~~~~~~~~A~~~~~~al~l~~~ 479 (484)
.++..+|++++|++.|+++++++|+
T Consensus 248 ~~~~~~g~~~~A~~~~~~a~~~~~~ 272 (327)
T 3cv0_A 248 VSYSNMSQYDLAAKQLVRAIYMQVG 272 (327)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHhccHHHHHHHHHHHHHhCCc
Confidence 9999999999999999999999887
|
| >1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.18 E-value=6.9e-11 Score=112.10 Aligned_cols=103 Identities=14% Similarity=0.038 Sum_probs=90.9
Q ss_pred HhhhhhHhHHHHHhc-cCHHHHHHHHHHHHhcCCCCC------HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChH-
Q 011519 377 ETLNSKKKGDVAFRH-KDFRASIECYTQFIDVGTMVS------PTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHM- 448 (484)
Q Consensus 377 ~a~~~~~~g~~~~~~-~~~~~A~~~~~~ai~~~p~~~------~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~- 448 (484)
.+..+...|..+... |++++|+..|++|+++.|. . ..++.++|.++..+|+|++|+..++++++++|++..
T Consensus 116 ~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~-~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 194 (292)
T 1qqe_A 116 GANFKFELGEILENDLHDYAKAIDCYELAGEWYAQ-DQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLS 194 (292)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTT
T ss_pred HHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHh-CCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcc
Confidence 466788999999996 9999999999999999875 3 467999999999999999999999999999998754
Q ss_pred ------HHHHHHHHHHHcCCHHHHHHHHHHHHhccccc
Q 011519 449 ------AAYLQAAALFALGKENEAQAALREASILENKK 480 (484)
Q Consensus 449 ------a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 480 (484)
+|+++|.++..+|++++|+..|+++++++|+.
T Consensus 195 ~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~ 232 (292)
T 1qqe_A 195 QWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNF 232 (292)
T ss_dssp GGGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC----
T ss_pred cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Confidence 68999999999999999999999999999863
|
| >3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A | Back alignment and structure |
|---|
Probab=99.18 E-value=1.8e-10 Score=109.93 Aligned_cols=105 Identities=12% Similarity=0.064 Sum_probs=100.1
Q ss_pred HHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHH
Q 011519 376 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAA 455 (484)
Q Consensus 376 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 455 (484)
.....+...|..++..|++++|+..|+++++.+|. +..++..+|.++...|++++|+..++++++++|+++.+++.+|.
T Consensus 19 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~ 97 (327)
T 3cv0_A 19 MYHENPMEEGLSMLKLANLAEAALAFEAVCQAAPE-REEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAV 97 (327)
T ss_dssp GGSSCHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcCCHHHHHHHHH
Confidence 45667889999999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 456 ALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 456 ~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
++..+|++++|+..|+++++++|+..
T Consensus 98 ~~~~~~~~~~A~~~~~~~~~~~~~~~ 123 (327)
T 3cv0_A 98 SHTNEHNANAALASLRAWLLSQPQYE 123 (327)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTSTTTT
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCccH
Confidence 99999999999999999999987654
|
| >1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.18 E-value=1.7e-10 Score=107.35 Aligned_cols=106 Identities=13% Similarity=0.085 Sum_probs=91.6
Q ss_pred hHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCh------
Q 011519 374 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWH------ 447 (484)
Q Consensus 374 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~------ 447 (484)
.+.....+...|..+...|++++|+..|+++++++|. ++.++.++|.+|..+|++++|+..++++++++|++.
T Consensus 73 ~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~ 151 (275)
T 1xnf_A 73 RPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPT-YNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWL 151 (275)
T ss_dssp CCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCcc-ccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCChHHHHHH
Confidence 3445677889999999999999999999999999999 899999999999999999999999999999999875
Q ss_pred ----------------------------------------------------------------HHHHHHHHHHHHcCCH
Q 011519 448 ----------------------------------------------------------------MAAYLQAAALFALGKE 463 (484)
Q Consensus 448 ----------------------------------------------------------------~a~~~~g~~~~~~~~~ 463 (484)
.+|+.+|.+|..+|++
T Consensus 152 ~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~ 231 (275)
T 1xnf_A 152 YLAEQKLDEKQAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQTLMERLKADATDNTSLAEHLSETNFYLGKYYLSLGDL 231 (275)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHSCCCSTHHHHHHHHTTSSCHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHhcCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHhcCHHHHHHHHHHHhcccccccccccHHHHHHHHHHHHcCCH
Confidence 5667777777777777
Q ss_pred HHHHHHHHHHHhccccc
Q 011519 464 NEAQAALREASILENKK 480 (484)
Q Consensus 464 ~~A~~~~~~al~l~~~~ 480 (484)
++|+..|+++++++|++
T Consensus 232 ~~A~~~~~~al~~~p~~ 248 (275)
T 1xnf_A 232 DSATALFKLAVANNVHN 248 (275)
T ss_dssp HHHHHHHHHHHTTCCTT
T ss_pred HHHHHHHHHHHhCCchh
Confidence 77777777777777654
|
| >4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.17 E-value=9e-11 Score=96.47 Aligned_cols=70 Identities=14% Similarity=-0.047 Sum_probs=66.3
Q ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 412 SPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 412 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
.+.++.++|.++++.|+|++|+..|++||+++|+++.+|+++|.+|..+|++++|+++|++|++++|+..
T Consensus 7 ~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~ 76 (127)
T 4gcn_A 7 AAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETR 76 (127)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccc
Confidence 4568999999999999999999999999999999999999999999999999999999999999998653
|
| >2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A | Back alignment and structure |
|---|
Probab=99.17 E-value=2.7e-10 Score=104.79 Aligned_cols=107 Identities=8% Similarity=-0.099 Sum_probs=100.6
Q ss_pred hHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHH
Q 011519 374 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQ 453 (484)
Q Consensus 374 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 453 (484)
.+.....+...|..+++.|++++|+..|+++++.+|. +..++..+|.++..+|++++|+..++++++.+|++..+++.+
T Consensus 137 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~ 215 (252)
T 2ho1_A 137 YPERSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRN-QPSVALEMADLLYKEREYVPARQYYDLFAQGGGQNARSLLLG 215 (252)
T ss_dssp CTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSCCCHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcc-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHHH
Confidence 3456778889999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 454 AAALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 454 g~~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
+.++..+|++++|+..|+++++++|++.
T Consensus 216 ~~~~~~~g~~~~A~~~~~~~~~~~p~~~ 243 (252)
T 2ho1_A 216 IRLAKVFEDRDTAASYGLQLKRLYPGSL 243 (252)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTSH
T ss_pred HHHHHHccCHHHHHHHHHHHHHHCCCCH
Confidence 9999999999999999999999988653
|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.17 E-value=2.7e-10 Score=109.99 Aligned_cols=100 Identities=14% Similarity=0.099 Sum_probs=93.5
Q ss_pred hhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHH----HHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHH
Q 011519 381 SKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPT----AFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAA 456 (484)
Q Consensus 381 ~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~----~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 456 (484)
....|..+++.|++++|+..|+++++.+|. ++. ++.++|.++..+|++++|+..++++++++|+++.+++.+|.+
T Consensus 237 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~ 315 (359)
T 3ieg_A 237 LIESAEELIRDGRYTDATSKYESVMKTEPS-VAEYTVRSKERICHCFSKDEKPVEAIRICSEVLQMEPDNVNALKDRAEA 315 (359)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-SHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCCC-chHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccHHHHHHHHHH
Confidence 446699999999999999999999999999 774 477899999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHHhcccccc
Q 011519 457 LFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 457 ~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
+..+|++++|+..|++|++++|++.
T Consensus 316 ~~~~g~~~~A~~~~~~a~~~~p~~~ 340 (359)
T 3ieg_A 316 YLIEEMYDEAIQDYEAAQEHNENDQ 340 (359)
T ss_dssp HHHTTCHHHHHHHHHHHHTTCTTCH
T ss_pred HHHcCCHHHHHHHHHHHHhcCCCCh
Confidence 9999999999999999999998753
|
| >3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.16 E-value=2e-10 Score=109.76 Aligned_cols=101 Identities=8% Similarity=-0.017 Sum_probs=55.0
Q ss_pred hhhhhHhHHHHHhcc-CHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHH
Q 011519 378 TLNSKKKGDVAFRHK-DFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAA 456 (484)
Q Consensus 378 a~~~~~~g~~~~~~~-~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 456 (484)
...+...|..+...| ++++|+..|+++++++|. +..+|.++|.++..+|++++|+..++++++++|++..+++.+|.+
T Consensus 90 ~~~~~~l~~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~ 168 (330)
T 3hym_B 90 PVSWFAVGCYYLMVGHKNEHARRYLSKATTLEKT-YGPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKGCHLPMLYIGLE 168 (330)
T ss_dssp THHHHHHHHHHHHSCSCHHHHHHHHHHHHTTCTT-CTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhccccHHHHHHHHHH
Confidence 344455555555555 555555555555555555 555555555555555555555555555555555555555555555
Q ss_pred HHHcCCHHHHHHHHHHHHhcccc
Q 011519 457 LFALGKENEAQAALREASILENK 479 (484)
Q Consensus 457 ~~~~~~~~~A~~~~~~al~l~~~ 479 (484)
|..+|++++|+..|+++++++|+
T Consensus 169 ~~~~~~~~~A~~~~~~al~~~~~ 191 (330)
T 3hym_B 169 YGLTNNSKLAERFFSQALSIAPE 191 (330)
T ss_dssp HHHTTCHHHHHHHHHHHHTTCTT
T ss_pred HHHHhhHHHHHHHHHHHHHhCCC
Confidence 55555555555555555555543
|
| >2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A | Back alignment and structure |
|---|
Probab=99.16 E-value=4e-11 Score=100.58 Aligned_cols=82 Identities=6% Similarity=-0.059 Sum_probs=75.6
Q ss_pred HHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhccc
Q 011519 399 ECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILEN 478 (484)
Q Consensus 399 ~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~ 478 (484)
..|.++++++|. +...++++|.+++..|++++|+..++++++++|+++.+|+.+|.+|..+|++++|+..|++|++++|
T Consensus 5 ~~l~~al~~~p~-~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p 83 (142)
T 2xcb_A 5 GTLAMLRGLSED-TLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDI 83 (142)
T ss_dssp ----CCTTCCHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred hhHHHHHcCCHH-HHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCC
Confidence 567889999999 9999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccc
Q 011519 479 KKS 481 (484)
Q Consensus 479 ~~~ 481 (484)
++.
T Consensus 84 ~~~ 86 (142)
T 2xcb_A 84 NEP 86 (142)
T ss_dssp TCT
T ss_pred CCc
Confidence 764
|
| >2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A | Back alignment and structure |
|---|
Probab=99.16 E-value=1.4e-10 Score=105.50 Aligned_cols=102 Identities=13% Similarity=0.067 Sum_probs=92.8
Q ss_pred hhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHH---HHHHHHHHHHh------------------cCCHHHHHHHH
Q 011519 378 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPT---AFARRSLSYLM------------------SDMPQEALNDA 436 (484)
Q Consensus 378 a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~---~~~~~a~~~~~------------------~~~~~~A~~~~ 436 (484)
...+...|..+++.|+|++|+..|+++++.+|+ ++. +++++|.++.. +|++++|+..+
T Consensus 41 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~-~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~ 119 (225)
T 2yhc_A 41 QQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPT-HPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDF 119 (225)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcC-CCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHH
Confidence 467889999999999999999999999999998 653 78999999886 57999999999
Q ss_pred HHHHhcCCCChHHH-----------------HHHHHHHHHcCCHHHHHHHHHHHHhccccc
Q 011519 437 SQAQVISPVWHMAA-----------------YLQAAALFALGKENEAQAALREASILENKK 480 (484)
Q Consensus 437 ~~al~~~p~~~~a~-----------------~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 480 (484)
+++++.+|+...++ +.+|.+|+..|++++|+..|+++++..|+.
T Consensus 120 ~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~ 180 (225)
T 2yhc_A 120 SKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDT 180 (225)
T ss_dssp HHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTS
T ss_pred HHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCC
Confidence 99999999998665 678999999999999999999999998764
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=99.15 E-value=1.6e-11 Score=124.92 Aligned_cols=105 Identities=14% Similarity=0.096 Sum_probs=93.7
Q ss_pred hHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHH
Q 011519 374 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQ 453 (484)
Q Consensus 374 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 453 (484)
.+..+..+...|..+++.|+|++|+..|++|++++|. ++.+|+++|.+|..+|++++|+..+++|++++|++..+++.+
T Consensus 36 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~-~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l 114 (477)
T 1wao_1 36 NPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKK-YIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKY 114 (477)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCTTHHHHH
T ss_pred CCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 4556788999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHH--HHHcCCHHHHHHHHH-----------HHHhcccc
Q 011519 454 AAA--LFALGKENEAQAALR-----------EASILENK 479 (484)
Q Consensus 454 g~~--~~~~~~~~~A~~~~~-----------~al~l~~~ 479 (484)
|.+ +..+|++++|++.|+ ++++++|+
T Consensus 115 ~~~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~al~~~~~ 153 (477)
T 1wao_1 115 QECNKIVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDE 153 (477)
T ss_dssp HHHHHHHHHHHHCCC------CCSTTTCCTTSSCCCCTT
T ss_pred HHHHHHHHHHHHHHHhccccccchhHhhhhhhhcccccc
Confidence 999 889999999999999 77777654
|
| >1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.14 E-value=1.4e-10 Score=110.02 Aligned_cols=106 Identities=8% Similarity=-0.198 Sum_probs=94.9
Q ss_pred HHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCC-C----HHHHHHHHHHHHhc-CCHHHHHHHHHHHHhcCCCC--
Q 011519 375 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMV-S----PTAFARRSLSYLMS-DMPQEALNDASQAQVISPVW-- 446 (484)
Q Consensus 375 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~-~----~~~~~~~a~~~~~~-~~~~~A~~~~~~al~~~p~~-- 446 (484)
...+..+.+.|..+.+.|++++|+..|++|+++.|.. + ..++.++|.+|... |++++|+..+++|+++.|+.
T Consensus 74 ~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~ 153 (292)
T 1qqe_A 74 DEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQS 153 (292)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCC
Confidence 3457788999999999999999999999999997751 1 45899999999995 99999999999999998865
Q ss_pred ----hHHHHHHHHHHHHcCCHHHHHHHHHHHHhccccc
Q 011519 447 ----HMAAYLQAAALFALGKENEAQAALREASILENKK 480 (484)
Q Consensus 447 ----~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 480 (484)
+.++.++|.+|..+|+|++|+..|+++++++|+.
T Consensus 154 ~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~ 191 (292)
T 1qqe_A 154 VALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGN 191 (292)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSC
T ss_pred hHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcC
Confidence 5789999999999999999999999999998754
|
| >2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.14 E-value=3.9e-10 Score=98.15 Aligned_cols=85 Identities=13% Similarity=-0.000 Sum_probs=78.8
Q ss_pred hccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCC--hHHHHHHHHHHHHcCCHHHHH
Q 011519 390 RHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVW--HMAAYLQAAALFALGKENEAQ 467 (484)
Q Consensus 390 ~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~--~~a~~~~g~~~~~~~~~~~A~ 467 (484)
..++..+|+..|+++++.+|+ ++.+++++|.++..+|++++|+..++++++++|++ +.+++++|.++..+|+.++|+
T Consensus 86 ~~~~~~~a~~~~~~al~~~P~-~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A~ 164 (176)
T 2r5s_A 86 QQAAESPELKRLEQELAANPD-NFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNAIA 164 (176)
T ss_dssp HHHTSCHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHHH
T ss_pred hhcccchHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCcHH
Confidence 334555689999999999999 99999999999999999999999999999999986 569999999999999999999
Q ss_pred HHHHHHHh
Q 011519 468 AALREASI 475 (484)
Q Consensus 468 ~~~~~al~ 475 (484)
..|++++.
T Consensus 165 ~~y~~al~ 172 (176)
T 2r5s_A 165 SKYRRQLY 172 (176)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999985
|
| >3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus} | Back alignment and structure |
|---|
Probab=99.13 E-value=2.7e-10 Score=97.86 Aligned_cols=89 Identities=8% Similarity=-0.108 Sum_probs=81.6
Q ss_pred hhhhhHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHH
Q 011519 370 MWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMA 449 (484)
Q Consensus 370 ~~~~~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a 449 (484)
.....+..+..+...|..+++.|+|++|+..|+++++++|+ ++.+|+++|.+|..+|++++|+..++++++++|++..+
T Consensus 37 al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~ 115 (164)
T 3sz7_A 37 ALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPK-YSKAWSRLGLARFDMADYKGAKEAYEKGIEAEGNGGSD 115 (164)
T ss_dssp HHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHSSSCCH
T ss_pred HHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHH
Confidence 33445567888999999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH
Q 011519 450 AYLQAAALFA 459 (484)
Q Consensus 450 ~~~~g~~~~~ 459 (484)
|+.+|.+...
T Consensus 116 ~~~~~l~~~~ 125 (164)
T 3sz7_A 116 AMKRGLETTK 125 (164)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999877554
|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A | Back alignment and structure |
|---|
Probab=99.12 E-value=5.2e-10 Score=112.19 Aligned_cols=100 Identities=14% Similarity=0.099 Sum_probs=93.9
Q ss_pred hhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCH----HHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHH
Q 011519 381 SKKKGDVAFRHKDFRASIECYTQFIDVGTMVSP----TAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAA 456 (484)
Q Consensus 381 ~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~----~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 456 (484)
+...|..+.+.|++++|+..|+++++++|. ++ .+|.++|.++.++|++++|+..++++++++|+++.+|+.+|.+
T Consensus 260 ~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~ 338 (450)
T 2y4t_A 260 LIESAEELIRDGRYTDATSKYESVMKTEPS-IAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALKDRAEA 338 (450)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCCS-SHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhcCCc-chHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccHHHHHHHHHH
Confidence 345599999999999999999999999999 75 4799999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHHhcccccc
Q 011519 457 LFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 457 ~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
+..+|++++|+..|+++++++|++.
T Consensus 339 ~~~~~~~~~A~~~~~~al~~~p~~~ 363 (450)
T 2y4t_A 339 YLIEEMYDEAIQDYETAQEHNENDQ 363 (450)
T ss_dssp HHHTTCHHHHHHHHHHHHTTSSSCH
T ss_pred HHHhcCHHHHHHHHHHHHHhCcchH
Confidence 9999999999999999999998753
|
| >3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.12 E-value=4.4e-10 Score=106.51 Aligned_cols=106 Identities=11% Similarity=-0.042 Sum_probs=92.5
Q ss_pred HHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHH--HHHHhcCCHHHHHHHHHHHHhcCCCChHHHHH
Q 011519 375 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRS--LSYLMSDMPQEALNDASQAQVISPVWHMAAYL 452 (484)
Q Consensus 375 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a--~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~ 452 (484)
+.....+...|..+.+.|++++|+..|+++++.+|+ +.......+ ..+...|++++|+..++++++.+|+++.+|+.
T Consensus 127 ~~~~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~-~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p~~~~~~~~ 205 (291)
T 3mkr_A 127 GDSLECMAMTVQILLKLDRLDLARKELKKMQDQDED-ATLTQLATAWVSLAAGGEKLQDAYYIFQEMADKCSPTLLLLNG 205 (291)
T ss_dssp CCSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCCCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcC-cHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHhCCCcHHHHHH
Confidence 355667888999999999999999999999999999 764433333 23334589999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 453 QAAALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 453 ~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
+|.++..+|++++|++.|++|++++|++.
T Consensus 206 la~~~~~~g~~~eA~~~l~~al~~~p~~~ 234 (291)
T 3mkr_A 206 QAACHMAQGRWEAAEGVLQEALDKDSGHP 234 (291)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 99999999999999999999999998764
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=99.11 E-value=1.5e-11 Score=117.38 Aligned_cols=183 Identities=13% Similarity=0.094 Sum_probs=123.1
Q ss_pred cccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCC-CCc--eeeeeeeeeeCC---ceEEEEecC
Q 011519 62 VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRR--LANLLGCCCEGD---ERLLVAEYM 135 (484)
Q Consensus 62 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-hpn--iv~l~~~~~~~~---~~~lv~Ey~ 135 (484)
++.++.|.++.||++. ..+++|+.... .....+.+|+.+|+.+. +.. +.+++......+ ..|+|||++
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 4557899999999864 46889986532 23567889999998873 332 444554443332 358999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcC-----------------------------------------
Q 011519 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK----------------------------------------- 174 (484)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~----------------------------------------- 174 (484)
+|.+|.+... ..++..++..++.+++..|..||+.
T Consensus 99 ~G~~l~~~~~----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 174 (304)
T 3sg8_A 99 KGVPLTPLLL----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVD 174 (304)
T ss_dssp CCEECCHHHH----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHH
T ss_pred CCeECCcccc----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHH
Confidence 9988875432 2467778888888888888888851
Q ss_pred ----------------CCcccccccccceeecC--CCCceeeccCCccccCCCCcccCCCCC---CCcccccC-----CC
Q 011519 175 ----------------ERALYHDLNAYRIVFDD--DVNPRLSCFGLMKNSRDGRSYSTNLAF---TPPEYLRT-----GR 228 (484)
Q Consensus 175 ----------------~~ivH~Dlkp~Nill~~--~~~~kl~DfG~a~~~~~~~~~~~t~~y---~aPE~~~~-----~~ 228 (484)
..++|+|++|.||++++ .+.+.|+||+.+..............+ ..|+.... +.
T Consensus 175 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~ 254 (304)
T 3sg8_A 175 DFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKH 254 (304)
T ss_dssp HHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTC
T ss_pred HHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCC
Confidence 14699999999999997 456789999998764433222211111 23332211 00
Q ss_pred ---------CCCCCceeehHHHHHHHhhCCCCCCc
Q 011519 229 ---------VTPESVMYSFGTLLLDLLSGKHIPPS 254 (484)
Q Consensus 229 ---------~~~~~Dv~slG~~l~el~tg~~p~~~ 254 (484)
.....+.|++|.+++.+.+|..++..
T Consensus 255 ~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~~~ 289 (304)
T 3sg8_A 255 KDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDWYE 289 (304)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 11125899999999999999865433
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.11 E-value=4.3e-10 Score=116.40 Aligned_cols=111 Identities=7% Similarity=-0.111 Sum_probs=104.0
Q ss_pred hhhhhHHHhhhhhHhHHHHHhccC----------HHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcC--CHHHHHHHHH
Q 011519 370 MWTGQMQETLNSKKKGDVAFRHKD----------FRASIECYTQFIDVGTMVSPTAFARRSLSYLMSD--MPQEALNDAS 437 (484)
Q Consensus 370 ~~~~~~~~a~~~~~~g~~~~~~~~----------~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~--~~~~A~~~~~ 437 (484)
....++.....|..++..+.+.++ +++|++.++++|+.+|+ ++.+|++|+.++.+++ ++++|++.++
T Consensus 55 ~l~~nP~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK-~y~aW~hR~w~l~~l~~~~~~~el~~~~ 133 (567)
T 1dce_A 55 ILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPK-SYGTWHHRCWLLSRLPEPNWARELELCA 133 (567)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTCSSCCHHHHHHHHH
T ss_pred HHHHCchhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcccccHHHHHHHHH
Confidence 334567888899999999999888 99999999999999999 9999999999999999 7799999999
Q ss_pred HHHhcCCCChHHHHHHHHHHHHcC-CHHHHHHHHHHHHhcccccc
Q 011519 438 QAQVISPVWHMAAYLQAAALFALG-KENEAQAALREASILENKKS 481 (484)
Q Consensus 438 ~al~~~p~~~~a~~~~g~~~~~~~-~~~~A~~~~~~al~l~~~~~ 481 (484)
+++++||.+..||++||.++..+| .+++|++.+.++++++|.+.
T Consensus 134 k~l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n~ 178 (567)
T 1dce_A 134 RFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNY 178 (567)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCH
T ss_pred HHHhhccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCCc
Confidence 999999999999999999999999 99999999999999998764
|
| >1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A | Back alignment and structure |
|---|
Probab=99.10 E-value=2.2e-10 Score=115.89 Aligned_cols=91 Identities=12% Similarity=0.152 Sum_probs=84.2
Q ss_pred hhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 011519 378 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAAL 457 (484)
Q Consensus 378 a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 457 (484)
+..+.+.|..+++.|+|++|+..|++||+++|+ ++.+|+++|.+|..+|+|++|+.+|++|++++|++..+++.+|.++
T Consensus 317 ~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~ 395 (457)
T 1kt0_A 317 LAAFLNLAMCYLKLREYTKAVECCDKALGLDSA-NEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQ 395 (457)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCc-cHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 678889999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHH
Q 011519 458 FALGKENEAQAA 469 (484)
Q Consensus 458 ~~~~~~~~A~~~ 469 (484)
..++++++|.+.
T Consensus 396 ~~~~~~~~a~~~ 407 (457)
T 1kt0_A 396 KKAKEHNERDRR 407 (457)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999998865
|
| >3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.09 E-value=5.7e-10 Score=90.02 Aligned_cols=88 Identities=7% Similarity=-0.114 Sum_probs=78.1
Q ss_pred hHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHH
Q 011519 374 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQ 453 (484)
Q Consensus 374 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 453 (484)
.+.....+...|..++..|+|++|+..|+++++++|+ ++.+++++|.++..+|++++|+..+.++++.+|+++......
T Consensus 23 ~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~ 101 (117)
T 3k9i_A 23 GKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPN-HQALRVFYAMVLYNLGRYEQGVELLLKIIAETSDDETIQSYK 101 (117)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHTH
T ss_pred CccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-chHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHH
Confidence 4677888999999999999999999999999999999 999999999999999999999999999999999998876544
Q ss_pred HHHHHHcCC
Q 011519 454 AAALFALGK 462 (484)
Q Consensus 454 g~~~~~~~~ 462 (484)
..+....+.
T Consensus 102 ~ai~~~~~~ 110 (117)
T 3k9i_A 102 QAILFYADK 110 (117)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHHHHH
Confidence 444444333
|
| >3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=99.08 E-value=2.7e-10 Score=97.66 Aligned_cols=91 Identities=11% Similarity=0.007 Sum_probs=81.4
Q ss_pred hHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCh-HHHHH
Q 011519 374 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWH-MAAYL 452 (484)
Q Consensus 374 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~-~a~~~ 452 (484)
.+..+..+.+.|..+++.|+|++|+..+++||+++|. ++.+|+++|.+|..+|++++|+.++.++++++|++. .....
T Consensus 59 ~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~-~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~ 137 (162)
T 3rkv_A 59 DRKNIPLYANMSQCYLNIGDLHEAEETSSEVLKREET-NEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVARE 137 (162)
T ss_dssp HHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcCCc-chHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 4456678999999999999999999999999999999 999999999999999999999999999999999999 66777
Q ss_pred HHHHHHHcCCHHH
Q 011519 453 QAAALFALGKENE 465 (484)
Q Consensus 453 ~g~~~~~~~~~~~ 465 (484)
++.+...++++++
T Consensus 138 l~~~~~~~~~~~~ 150 (162)
T 3rkv_A 138 MKIVTERRAEKKA 150 (162)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHH
Confidence 7777766655544
|
| >3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.08 E-value=5.3e-10 Score=91.26 Aligned_cols=88 Identities=11% Similarity=0.035 Sum_probs=81.4
Q ss_pred hhhHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcC------CC
Q 011519 372 TGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVIS------PV 445 (484)
Q Consensus 372 ~~~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~------p~ 445 (484)
...+..+..+...|..+++.|+|++|+..|+++++++|+ ++.+|+++|.++..+|++++|+..++++++++ |+
T Consensus 32 ~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~p~ 110 (126)
T 3upv_A 32 KRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPN-FVRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSS 110 (126)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTT
T ss_pred HhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHHhCHHHHHHHHHHHHHhCcccCCchh
Confidence 334566788999999999999999999999999999999 99999999999999999999999999999999 99
Q ss_pred ChHHHHHHHHHHHHc
Q 011519 446 WHMAAYLQAAALFAL 460 (484)
Q Consensus 446 ~~~a~~~~g~~~~~~ 460 (484)
+..++..++.+...+
T Consensus 111 ~~~~~~~l~~~~~~l 125 (126)
T 3upv_A 111 AREIDQLYYKASQQR 125 (126)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999998887654
|
| >2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=99.08 E-value=1.3e-10 Score=112.72 Aligned_cols=102 Identities=12% Similarity=-0.000 Sum_probs=60.1
Q ss_pred hhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHH-H
Q 011519 379 LNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAA-L 457 (484)
Q Consensus 379 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~-~ 457 (484)
..+.+.|..+++.|+|++|+..|+++|+++|+ +..+|+++|.+|..+|++++|+.+++++++++|++..++..++.+ .
T Consensus 231 ~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~ 309 (338)
T 2if4_A 231 PCHLNIAACLIKLKRYDEAIGHCNIVLTEEEK-NPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAE 309 (338)
T ss_dssp HHHHHHHHHHHTTTCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHTTC-----------------
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Confidence 36788999999999999999999999999999 999999999999999999999999999999999999999999998 5
Q ss_pred HHcCCHHHHHHHHHHHHhcccccc
Q 011519 458 FALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 458 ~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
...+..++|.+.|++++.++|.+.
T Consensus 310 ~~~~~~~~a~~~~~~~l~~~p~~~ 333 (338)
T 2if4_A 310 QEKALYQKQKEMYKGIFKGKDEGG 333 (338)
T ss_dssp ------------------------
T ss_pred HHHHHHHHHHHHHHHhhCCCCCCC
Confidence 567888999999999999988664
|
| >2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1 | Back alignment and structure |
|---|
Probab=99.07 E-value=5.5e-10 Score=90.83 Aligned_cols=89 Identities=11% Similarity=0.058 Sum_probs=84.2
Q ss_pred hHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHH
Q 011519 374 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQ 453 (484)
Q Consensus 374 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 453 (484)
.+.....+...|..+...|++++|+..|+++++.+|. ++.+++++|.++..+|++++|+..++++++++|++..+++.+
T Consensus 42 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~l 120 (131)
T 2vyi_A 42 NPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPA-YSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNL 120 (131)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCcc-CHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCccchHHHHHH
Confidence 3455678889999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCH
Q 011519 454 AAALFALGKE 463 (484)
Q Consensus 454 g~~~~~~~~~ 463 (484)
|.++..+|++
T Consensus 121 ~~~~~~~~~~ 130 (131)
T 2vyi_A 121 KIAELKLREA 130 (131)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHhcC
Confidence 9999999886
|
| >3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A | Back alignment and structure |
|---|
Probab=99.07 E-value=6e-10 Score=114.36 Aligned_cols=107 Identities=12% Similarity=0.074 Sum_probs=100.5
Q ss_pred hHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHH
Q 011519 374 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQ 453 (484)
Q Consensus 374 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 453 (484)
.+.....+...|..+...|++++|+..|+++++.+|. +..++.++|.++..+|++++|+..++++++++|+++.+++.+
T Consensus 306 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l 384 (537)
T 3fp2_A 306 NPEYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPE-NVYPYIQLACLLYKQGKFTESEAFFNETKLKFPTLPEVPTFF 384 (537)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHH
Confidence 3456678899999999999999999999999999999 899999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 454 AAALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 454 g~~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
|.++..+|++++|+..|+++++++|+..
T Consensus 385 ~~~~~~~g~~~~A~~~~~~a~~~~~~~~ 412 (537)
T 3fp2_A 385 AEILTDRGDFDTAIKQYDIAKRLEEVQE 412 (537)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHCS
T ss_pred HHHHHHhCCHHHHHHHHHHHHHcCCcch
Confidence 9999999999999999999999987653
|
| >1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.07 E-value=1.6e-10 Score=97.20 Aligned_cols=82 Identities=15% Similarity=0.041 Sum_probs=72.3
Q ss_pred hhHhhhhhhhHHHhhhhhHhHHHHHhccCH----------HHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcC-------
Q 011519 365 GAATEMWTGQMQETLNSKKKGDVAFRHKDF----------RASIECYTQFIDVGTMVSPTAFARRSLSYLMSD------- 427 (484)
Q Consensus 365 ~~a~e~~~~~~~~a~~~~~~g~~~~~~~~~----------~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~------- 427 (484)
..+......++.++..+.+.|.++.+.+++ ++|+..|++||+++|+ ++.+|+++|.+|..+|
T Consensus 23 ~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~-~~~A~~~LG~ay~~lg~l~P~~~ 101 (158)
T 1zu2_A 23 QDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPK-KDEAVWCIGNAYTSFAFLTPDET 101 (158)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHCCCHH
T ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcC-cHHHHHHHHHHHHHhcccCcchh
Confidence 334444455678899999999999988875 5999999999999999 9999999999999985
Q ss_pred ----CHHHHHHHHHHHHhcCCCCh
Q 011519 428 ----MPQEALNDASQAQVISPVWH 447 (484)
Q Consensus 428 ----~~~~A~~~~~~al~~~p~~~ 447 (484)
++++|+..|++|++++|++.
T Consensus 102 ~a~g~~~eA~~~~~kAl~l~P~~~ 125 (158)
T 1zu2_A 102 EAKHNFDLATQFFQQAVDEQPDNT 125 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCH
T ss_pred hhhccHHHHHHHHHHHHHhCCCCH
Confidence 89999999999999999985
|
| >2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=99.06 E-value=3.8e-10 Score=100.20 Aligned_cols=98 Identities=9% Similarity=0.053 Sum_probs=84.4
Q ss_pred hhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 011519 378 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAAL 457 (484)
Q Consensus 378 a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 457 (484)
...+...|..+++.|+|++|+..|+++++++|. +..+++++|.+|..+|++++|+..+.++++++|++..++..++.++
T Consensus 88 ~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 166 (198)
T 2fbn_A 88 ISCNLNLATCYNKNKDYPKAIDHASKVLKIDKN-NVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCV 166 (198)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHH
Confidence 367889999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHH-HHHHHHHhc
Q 011519 458 FALGKENEAQ-AALREASIL 476 (484)
Q Consensus 458 ~~~~~~~~A~-~~~~~al~l 476 (484)
..+++++++. ..|.+.+..
T Consensus 167 ~~~~~~~~~~~~~~~~~f~~ 186 (198)
T 2fbn_A 167 NKLKEARKKDKLTFGGMFDK 186 (198)
T ss_dssp HHHHHHHC------------
T ss_pred HHHHHHHHHHHHHHHHHhcc
Confidence 9999999998 556666554
|
| >3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A* | Back alignment and structure |
|---|
Probab=99.05 E-value=1.3e-09 Score=104.42 Aligned_cols=131 Identities=8% Similarity=-0.064 Sum_probs=111.9
Q ss_pred HHHHHHHHhCCcCchhhHhh-hhhhhHHHhhhhhHhHHHHHhcc-CHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhc-
Q 011519 350 AIHEILEKLGYKDDEGAATE-MWTGQMQETLNSKKKGDVAFRHK-DFRASIECYTQFIDVGTMVSPTAFARRSLSYLMS- 426 (484)
Q Consensus 350 ~~~e~l~~~~y~~~~~~a~e-~~~~~~~~a~~~~~~g~~~~~~~-~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~- 426 (484)
.+...+....+.++.....+ ....++.....|..++..+...+ .+++++..++++|..+|+ +..+|++|+.++..+
T Consensus 59 ~~r~~~~~~e~se~AL~lt~~~L~~nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPK-ny~aW~hR~wlL~~l~ 137 (349)
T 3q7a_A 59 YFRAIAAKEEKSERALELTEIIVRMNPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLK-SYQVWHHRLLLLDRIS 137 (349)
T ss_dssp HHHHHHHTTCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCC-CHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHhCchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHhc
Confidence 34444555555544433323 33456778889999999999998 599999999999999999 999999999999998
Q ss_pred C-CHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHcCCHH--------HHHHHHHHHHhcccccc
Q 011519 427 D-MPQEALNDASQAQVISPVWHMAAYLQAAALFALGKEN--------EAQAALREASILENKKS 481 (484)
Q Consensus 427 ~-~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~--------~A~~~~~~al~l~~~~~ 481 (484)
+ +++++++.++++++++|.+..||+.|+.++..+++++ ++++.+.++++++|.+.
T Consensus 138 ~~~~~~EL~~~~k~L~~dpkNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N~ 201 (349)
T 3q7a_A 138 PQDPVSEIEYIHGSLLPDPKNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRNN 201 (349)
T ss_dssp CSCCHHHHHHHHHHTSSCTTCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTCH
T ss_pred CCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCCCH
Confidence 8 9999999999999999999999999999999999988 99999999999998764
|
| >1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A | Back alignment and structure |
|---|
Probab=99.05 E-value=8.8e-10 Score=108.11 Aligned_cols=95 Identities=15% Similarity=0.156 Sum_probs=90.3
Q ss_pred hHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHH
Q 011519 374 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQ 453 (484)
Q Consensus 374 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 453 (484)
....+..+.+.|..+++.|+|++|+..|++||+++|+ ++.+|+++|.+|..+|++++|+.++++|++++|++..++..+
T Consensus 269 ~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l 347 (370)
T 1ihg_A 269 QPVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPS-NTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAEL 347 (370)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhCch-hHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 4566788999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHH
Q 011519 454 AAALFALGKENEAQAA 469 (484)
Q Consensus 454 g~~~~~~~~~~~A~~~ 469 (484)
+.++..++++++|.+.
T Consensus 348 ~~~~~~~~~~~~a~k~ 363 (370)
T 1ihg_A 348 LKVKQKIKAQKDKEKA 363 (370)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999988765
|
| >2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.04 E-value=8.7e-10 Score=114.88 Aligned_cols=106 Identities=16% Similarity=0.145 Sum_probs=94.1
Q ss_pred HHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhc------CCCCC-HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCh
Q 011519 375 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDV------GTMVS-PTAFARRSLSYLMSDMPQEALNDASQAQVISPVWH 447 (484)
Q Consensus 375 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~------~p~~~-~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~ 447 (484)
+.+...+...|..+.+.|++++|+..|+++++. +|. + ..+|.++|.++.+.|++++|+..++++++++|+++
T Consensus 472 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~-~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~ 550 (597)
T 2xpi_A 472 QYDPLLLNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEK-PWAATWANLGHAYRKLKMYDAAIDALNQGLLLSTNDA 550 (597)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSG-GGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSCCH
T ss_pred CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccchh-hHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCh
Confidence 345667888899999999999999999999988 555 4 67899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 448 MAAYLQAAALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 448 ~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
.+|+.+|.+|..+|++++|++.|+++++++|++.
T Consensus 551 ~~~~~l~~~~~~~g~~~~A~~~~~~~l~~~p~~~ 584 (597)
T 2xpi_A 551 NVHTAIALVYLHKKIPGLAITHLHESLAISPNEI 584 (597)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCCh
Confidence 9999999999999999999999999999998753
|
| >3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A* | Back alignment and structure |
|---|
Probab=99.04 E-value=7.4e-10 Score=104.71 Aligned_cols=100 Identities=11% Similarity=-0.034 Sum_probs=92.9
Q ss_pred HHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCC--hHHHHH
Q 011519 375 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVW--HMAAYL 452 (484)
Q Consensus 375 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~--~~a~~~ 452 (484)
+.........+..+.+.++.++|+..|+++++.+|+ ++.+++++|.+|..+|++++|+..+.++++.+|++ ..++.+
T Consensus 182 p~~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~-~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~ 260 (287)
T 3qou_A 182 QDTRYQGLVAQIELLXQAADTPEIQQLQQQVAENPE-DAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXT 260 (287)
T ss_dssp CSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHH
T ss_pred cchHHHHHHHHHHHHhhcccCccHHHHHHHHhcCCc-cHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHH
Confidence 344555666777788999999999999999999999 99999999999999999999999999999999999 999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHh
Q 011519 453 QAAALFALGKENEAQAALREASI 475 (484)
Q Consensus 453 ~g~~~~~~~~~~~A~~~~~~al~ 475 (484)
+|.++..+|+.++|+..|++++.
T Consensus 261 l~~~~~~~g~~~~a~~~~r~al~ 283 (287)
T 3qou_A 261 FQEILAALGTGDALASXYRRQLY 283 (287)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCcHHHHHHHHHH
Confidence 99999999999999999999986
|
| >2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.03 E-value=1e-09 Score=86.89 Aligned_cols=69 Identities=16% Similarity=0.076 Sum_probs=66.4
Q ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhccccc
Q 011519 412 SPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKK 480 (484)
Q Consensus 412 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 480 (484)
++..+.++|.++...|+|++|+..++++++++|+++.+|+++|.+|..+|++++|++.|+++++++|++
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 71 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTA 71 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSST
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc
Confidence 467899999999999999999999999999999999999999999999999999999999999999875
|
| >2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.03 E-value=3.2e-09 Score=110.53 Aligned_cols=103 Identities=9% Similarity=-0.097 Sum_probs=89.3
Q ss_pred HHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHH
Q 011519 375 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQA 454 (484)
Q Consensus 375 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 454 (484)
+.....+...|..+.+.|++++|++.|+++++.+|. +..+|++++.+|.+.|++++|+..++++++++|+++.+|+.+|
T Consensus 404 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~ 482 (597)
T 2xpi_A 404 PQFGPAWIGFAHSFAIEGEHDQAISAYTTAARLFQG-THLPYLFLGMQHMQLGNILLANEYLQSSYALFQYDPLLLNELG 482 (597)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTT-CSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-chHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHH
Confidence 445667888888888889999999999999888888 8888888999899999999999999999988888888888899
Q ss_pred HHHHHcCCHHHHHHHHHHHHhccc
Q 011519 455 AALFALGKENEAQAALREASILEN 478 (484)
Q Consensus 455 ~~~~~~~~~~~A~~~~~~al~l~~ 478 (484)
.+|...|++++|++.|++++++.|
T Consensus 483 ~~~~~~g~~~~A~~~~~~~~~~~~ 506 (597)
T 2xpi_A 483 VVAFNKSDMQTAINHFQNALLLVK 506 (597)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCHHHHHHHHHHHHHhhh
Confidence 999999999999999998888854
|
| >4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.02 E-value=1.4e-09 Score=109.94 Aligned_cols=102 Identities=15% Similarity=-0.009 Sum_probs=65.5
Q ss_pred hhhhhHhHHHHHhccCHHHHHHHHHHHHhcCC--------CCCHHHHHHHHHHHHhcC--CHHHHHHHHHHHHhcCCCCh
Q 011519 378 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGT--------MVSPTAFARRSLSYLMSD--MPQEALNDASQAQVISPVWH 447 (484)
Q Consensus 378 a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p--------~~~~~~~~~~a~~~~~~~--~~~~A~~~~~~al~~~p~~~ 447 (484)
+..+.+.|.+++..|+|++|+..|++++++.+ . .+.++.++|.++...| +|++|+..|++|++++|+++
T Consensus 94 ~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~ 172 (472)
T 4g1t_A 94 LVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPYRIE-SPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNP 172 (472)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSSCCC-CHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhcccccchh-hHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCH
Confidence 44556666777777777777777777765422 2 4556666666665543 46677777777777777777
Q ss_pred HHHHHHHHHHHH---cCCHHHHHHHHHHHHhccccc
Q 011519 448 MAAYLQAAALFA---LGKENEAQAALREASILENKK 480 (484)
Q Consensus 448 ~a~~~~g~~~~~---~~~~~~A~~~~~~al~l~~~~ 480 (484)
.+++.+|.+++. .+++++|++.|++|++++|++
T Consensus 173 ~~~~~~~~~~~~l~~~~~~~~al~~~~~al~l~p~~ 208 (472)
T 4g1t_A 173 EFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDN 208 (472)
T ss_dssp HHHHHHHHHHHHHHHSCCCCCTHHHHHHHHHHCSSC
T ss_pred HHHHHHHHHHHHhcCchHHHHHHHHHHHHhhcCCcc
Confidence 777776666433 455666777777777776654
|
| >2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7 | Back alignment and structure |
|---|
Probab=99.02 E-value=1.7e-09 Score=103.18 Aligned_cols=83 Identities=5% Similarity=-0.147 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHh-cCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChH-HHHHHHHHHHHcCCHHHHHHHHHH
Q 011519 395 RASIECYTQFID-VGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHM-AAYLQAAALFALGKENEAQAALRE 472 (484)
Q Consensus 395 ~~A~~~~~~ai~-~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~-a~~~~g~~~~~~~~~~~A~~~~~~ 472 (484)
++|+..|++||+ ++|+ +..+|.++|..+..+|++++|...|+++++++|+++. +|..+|.++..+|++++|++.|++
T Consensus 81 ~~A~~~~~rAl~~~~p~-~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~ 159 (308)
T 2ond_A 81 DEAANIYERAISTLLKK-NMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKK 159 (308)
T ss_dssp HHHHHHHHHHHTTTTTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHhcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 556666666665 4555 5556666666666666666666666666666665554 566666665556666666666666
Q ss_pred HHhccc
Q 011519 473 ASILEN 478 (484)
Q Consensus 473 al~l~~ 478 (484)
|++++|
T Consensus 160 a~~~~p 165 (308)
T 2ond_A 160 AREDAR 165 (308)
T ss_dssp HHTSTT
T ss_pred HHhcCC
Confidence 655544
|
| >2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8 | Back alignment and structure |
|---|
Probab=99.02 E-value=3.8e-10 Score=95.15 Aligned_cols=80 Identities=6% Similarity=-0.018 Sum_probs=72.0
Q ss_pred HHhhhhhHhHHHHHhccCHHHHHHHHHHHHhc-------CCCCCHHHH----HHHHHHHHhcCCHHHHHHHHHHHHhcCC
Q 011519 376 QETLNSKKKGDVAFRHKDFRASIECYTQFIDV-------GTMVSPTAF----ARRSLSYLMSDMPQEALNDASQAQVISP 444 (484)
Q Consensus 376 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~-------~p~~~~~~~----~~~a~~~~~~~~~~~A~~~~~~al~~~p 444 (484)
..+..|.++|.++.+.|+|++|+.+|++||++ +|+ ++.+| +|+|.++..+|++++|+.+|++|++++|
T Consensus 55 ~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~~e~~pd-~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p 133 (159)
T 2hr2_A 55 FDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRRGELNQD-EGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIE 133 (159)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCTTST-HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccccCCCc-hHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCC
Confidence 34568999999999999999999999999999 999 99999 9999999999999999999999999999
Q ss_pred CChHHHHHHHHH
Q 011519 445 VWHMAAYLQAAA 456 (484)
Q Consensus 445 ~~~~a~~~~g~~ 456 (484)
++...+-.+..+
T Consensus 134 ~d~~~~~~~~~~ 145 (159)
T 2hr2_A 134 ERKGETPGKERM 145 (159)
T ss_dssp HCCSCCTTHHHH
T ss_pred CcHHHHHHHHHH
Confidence 987655444433
|
| >3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A | Back alignment and structure |
|---|
Probab=99.01 E-value=7.5e-10 Score=102.98 Aligned_cols=104 Identities=10% Similarity=0.029 Sum_probs=96.4
Q ss_pred HHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhc--------CCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc----
Q 011519 375 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDV--------GTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVI---- 442 (484)
Q Consensus 375 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~--------~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~---- 442 (484)
...+..+...|..+...|++++|+..|++++++ +|. ...++.++|.++..+|++++|+..+++++++
T Consensus 82 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 160 (283)
T 3edt_B 82 PAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPD-VAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATR 160 (283)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHH-HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Confidence 566778999999999999999999999999988 455 6789999999999999999999999999999
Q ss_pred ----CCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccc
Q 011519 443 ----SPVWHMAAYLQAAALFALGKENEAQAALREASILENK 479 (484)
Q Consensus 443 ----~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 479 (484)
+|....+++.+|.+|..+|++++|+..|++++++.+.
T Consensus 161 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~~~ 201 (283)
T 3edt_B 161 LGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTRAHE 201 (283)
T ss_dssp SCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 8888999999999999999999999999999998543
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.01 E-value=7.4e-10 Score=114.66 Aligned_cols=111 Identities=9% Similarity=-0.001 Sum_probs=102.6
Q ss_pred hhhhhHHHhhhhhHhHHHHHhcc--CHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcC-CHHHHHHHHHHHHhcCCCC
Q 011519 370 MWTGQMQETLNSKKKGDVAFRHK--DFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSD-MPQEALNDASQAQVISPVW 446 (484)
Q Consensus 370 ~~~~~~~~a~~~~~~g~~~~~~~--~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~-~~~~A~~~~~~al~~~p~~ 446 (484)
....+++....|..++..+.+.+ ++++|++.++++|+++|. +..+|++|+.++..+| .+++|+++++++|+.+|.+
T Consensus 99 ~l~~~pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~-N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n 177 (567)
T 1dce_A 99 CLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADER-NFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSN 177 (567)
T ss_dssp HHHHCTTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCC
T ss_pred HHHhCCCCHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhccc-cccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCC
Confidence 33446778889999999999999 779999999999999999 9999999999999999 8999999999999999999
Q ss_pred hHHHHHHHHHHHHc--------------CCHHHHHHHHHHHHhcccccc
Q 011519 447 HMAAYLQAAALFAL--------------GKENEAQAALREASILENKKS 481 (484)
Q Consensus 447 ~~a~~~~g~~~~~~--------------~~~~~A~~~~~~al~l~~~~~ 481 (484)
..||++||.++..+ +.+++|++.+.+|++++|++.
T Consensus 178 ~saW~~r~~ll~~l~~~~~~~~~~~~~~~~~~eel~~~~~ai~~~P~~~ 226 (567)
T 1dce_A 178 YSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQ 226 (567)
T ss_dssp HHHHHHHHHHHHHHSCCCCSSSCCSSCHHHHHHHHHHHHHHHHHCSSCS
T ss_pred ccHHHHHHHHHHhhcccccccccccccHHHHHHHHHHHHHHHhhCCCCc
Confidence 99999999999886 668999999999999999764
|
| >3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A | Back alignment and structure |
|---|
Probab=99.00 E-value=7.7e-10 Score=104.77 Aligned_cols=101 Identities=15% Similarity=0.141 Sum_probs=88.1
Q ss_pred HhhhhhHhHHHHHhccCHHHHHHHHHHHHhc------CCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCC----
Q 011519 377 ETLNSKKKGDVAFRHKDFRASIECYTQFIDV------GTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVW---- 446 (484)
Q Consensus 377 ~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~------~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~---- 446 (484)
.+..+...|..+...|+|++|+..|++|++. ++.....+++|+|.+|.++|+|++|+..+++|+++.+..
T Consensus 154 ~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~ 233 (293)
T 3u3w_A 154 NLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMA 233 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCT
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHH
Confidence 3556889999999999999999999999953 111134589999999999999999999999999987554
Q ss_pred --hHHHHHHHHHHHHcC-CHHHHHHHHHHHHhcc
Q 011519 447 --HMAAYLQAAALFALG-KENEAQAALREASILE 477 (484)
Q Consensus 447 --~~a~~~~g~~~~~~~-~~~~A~~~~~~al~l~ 477 (484)
+.+|+++|.+|..+| ++++|+..|++|+++.
T Consensus 234 ~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~ 267 (293)
T 3u3w_A 234 LIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp THHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHH
Confidence 899999999999999 5799999999999875
|
| >1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A | Back alignment and structure |
|---|
Probab=99.00 E-value=1.4e-09 Score=82.80 Aligned_cols=74 Identities=20% Similarity=0.144 Sum_probs=67.3
Q ss_pred CCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 408 GTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 408 ~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
+|..++.+++++|.++...|++++|+..++++++++|+++.+++.+|.++..+|++++|+..|+++++++|.+.
T Consensus 4 ~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~ 77 (91)
T 1na3_A 4 DPGNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNA 77 (91)
T ss_dssp --CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred cccccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCH
Confidence 44325678999999999999999999999999999999999999999999999999999999999999998653
|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.99 E-value=2.4e-09 Score=109.06 Aligned_cols=130 Identities=11% Similarity=0.008 Sum_probs=109.8
Q ss_pred HHHHHHHhC-CcCchhhHhhhhhhhHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCH
Q 011519 351 IHEILEKLG-YKDDEGAATEMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMP 429 (484)
Q Consensus 351 ~~e~l~~~~-y~~~~~~a~e~~~~~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~ 429 (484)
+...+...+ +.+............+.....+...|..+...|++++|+..|+++++.+|. +..++.++|.++..+|++
T Consensus 276 l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~ 354 (514)
T 2gw1_A 276 MALIMADRNDSTEYYNYFDKALKLDSNNSSVYYHRGQMNFILQNYDQAGKDFDKAKELDPE-NIFPYIQLACLAYRENKF 354 (514)
T ss_dssp HHHHHHTSSCCTTGGGHHHHHHTTCTTCTHHHHHHHHHHHHTTCTTHHHHHHHHHHHTCSS-CSHHHHHHHHHTTTTTCH
T ss_pred HHHHHHHCCCHHHHHHHHHHHhhcCcCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhChh-hHHHHHHHHHHHHHcCCH
Confidence 333344444 333333333333334556778899999999999999999999999999999 999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 430 QEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 430 ~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
++|+..++++++.+|+++.+++.+|.++..+|++++|+..|+++++++|+..
T Consensus 355 ~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~ 406 (514)
T 2gw1_A 355 DDCETLFSEAKRKFPEAPEVPNFFAEILTDKNDFDKALKQYDLAIELENKLD 406 (514)
T ss_dssp HHHHHHHHHHHHHSTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHHHHcccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccc
Confidence 9999999999999999999999999999999999999999999999987653
|
| >3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A | Back alignment and structure |
|---|
Probab=98.98 E-value=1.3e-09 Score=101.29 Aligned_cols=101 Identities=13% Similarity=0.008 Sum_probs=93.9
Q ss_pred HHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcC--------CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc----
Q 011519 375 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVG--------TMVSPTAFARRSLSYLMSDMPQEALNDASQAQVI---- 442 (484)
Q Consensus 375 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~--------p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~---- 442 (484)
+..+..+...|..++..|++++|+..|++++++. |. ...++.++|.++..+|++++|+..+.+++++
T Consensus 40 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 118 (283)
T 3edt_B 40 PDVATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPA-VAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKV 118 (283)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHH-HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchH-HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 5667788999999999999999999999999873 44 5678999999999999999999999999998
Q ss_pred ----CCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Q 011519 443 ----SPVWHMAAYLQAAALFALGKENEAQAALREASIL 476 (484)
Q Consensus 443 ----~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l 476 (484)
+|....+++++|.+|..+|++++|+..|++++++
T Consensus 119 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 156 (283)
T 3edt_B 119 LGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEI 156 (283)
T ss_dssp HCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred cCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 6888999999999999999999999999999998
|
| >3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A | Back alignment and structure |
|---|
Probab=98.97 E-value=1.6e-09 Score=84.71 Aligned_cols=84 Identities=7% Similarity=0.076 Sum_probs=71.6
Q ss_pred HHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHH--HHH
Q 011519 375 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMA--AYL 452 (484)
Q Consensus 375 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a--~~~ 452 (484)
+.++..+...|..+++.|+|++|+..|+++++++|+ ++.+|+++|.+|..+|++++|+..+++++++.|..... ...
T Consensus 4 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~ 82 (100)
T 3ma5_A 4 PEDPFTRYALAQEHLKHDNASRALALFEELVETDPD-YVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQKDLSE 82 (100)
T ss_dssp -CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCHHHHHH
T ss_pred ccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCchhHHHH
Confidence 456778899999999999999999999999999999 99999999999999999999999999999998755433 333
Q ss_pred HHHHHHH
Q 011519 453 QAAALFA 459 (484)
Q Consensus 453 ~g~~~~~ 459 (484)
+..++..
T Consensus 83 l~~~l~~ 89 (100)
T 3ma5_A 83 LQDAKLK 89 (100)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4444433
|
| >2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646} | Back alignment and structure |
|---|
Probab=98.97 E-value=2.4e-09 Score=101.35 Aligned_cols=100 Identities=14% Similarity=0.124 Sum_probs=88.7
Q ss_pred HhhhhhHhHHHHHhccCHHHHHHHHHHHH---hcCCCCCH----HHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCC----
Q 011519 377 ETLNSKKKGDVAFRHKDFRASIECYTQFI---DVGTMVSP----TAFARRSLSYLMSDMPQEALNDASQAQVISPV---- 445 (484)
Q Consensus 377 ~a~~~~~~g~~~~~~~~~~~A~~~~~~ai---~~~p~~~~----~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~---- 445 (484)
.+..+...|..+...|+|++|+..|++|+ +..|. +. .+++|+|.+|..+|+|++|+..+++|+++.++
T Consensus 154 ~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~-~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~ 232 (293)
T 2qfc_A 154 NLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHD-NEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSM 232 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCC-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBC
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCc-cccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcH
Confidence 46688899999999999999999999999 44555 33 58999999999999999999999999988643
Q ss_pred --ChHHHHHHHHHHHHcCCHHHH-HHHHHHHHhcc
Q 011519 446 --WHMAAYLQAAALFALGKENEA-QAALREASILE 477 (484)
Q Consensus 446 --~~~a~~~~g~~~~~~~~~~~A-~~~~~~al~l~ 477 (484)
.+.+|+++|.+|..+|++++| ...|++|+++.
T Consensus 233 ~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~ 267 (293)
T 2qfc_A 233 ALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp SSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHH
Confidence 378999999999999999999 77799999875
|
| >2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2 | Back alignment and structure |
|---|
Probab=98.96 E-value=4.9e-10 Score=105.59 Aligned_cols=110 Identities=8% Similarity=-0.008 Sum_probs=90.9
Q ss_pred hhhhhHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChH-
Q 011519 370 MWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHM- 448 (484)
Q Consensus 370 ~~~~~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~- 448 (484)
.....+..+..+...|..+++.|+|++|+..|++|++++|+ +..+++++|.+|..+|++++|+..+.++++++|++..
T Consensus 30 al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~ 108 (281)
T 2c2l_A 30 AITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQ-SVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLN 108 (281)
T ss_dssp HHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchhh
Confidence 33344567788999999999999999999999999999999 9999999999999999999999999999999997621
Q ss_pred ----H--HHHHH----------------------HHHHHcCCHHHHHHHHHHHHhccccc
Q 011519 449 ----A--AYLQA----------------------AALFALGKENEAQAALREASILENKK 480 (484)
Q Consensus 449 ----a--~~~~g----------------------~~~~~~~~~~~A~~~~~~al~l~~~~ 480 (484)
. ...++ ...+..|++++|++.|++|++++|++
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l~~~~~~~A~~~~~~al~~~p~~ 168 (281)
T 2c2l_A 109 FGDDIPSALRIAKKKRWNSIEERRIHQESELHSYLTRLIAAERERELEECQRNHEGHEDD 168 (281)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHHHHTTTSGGGTTTSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccccch
Confidence 1 11111 01124689999999999999998864
|
| >3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.96 E-value=1.8e-09 Score=102.07 Aligned_cols=104 Identities=11% Similarity=-0.004 Sum_probs=95.0
Q ss_pred HHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhc--------CCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc----
Q 011519 375 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDV--------GTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVI---- 442 (484)
Q Consensus 375 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~--------~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~---- 442 (484)
...+..+...|..+...|++++|+..|++++++ .|. ...++.++|.+|..+|++++|+..+++++++
T Consensus 150 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~ 228 (311)
T 3nf1_A 150 PDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPN-VAKTKNNLASCYLKQGKFKQAETLYKEILTRAHER 228 (311)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHH-HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Confidence 556778899999999999999999999999998 666 6778999999999999999999999999974
Q ss_pred ---------------------------------------------CCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcc
Q 011519 443 ---------------------------------------------SPVWHMAAYLQAAALFALGKENEAQAALREASILE 477 (484)
Q Consensus 443 ---------------------------------------------~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~ 477 (484)
+|..+.+++.+|.+|..+|++++|++.|++|+++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~l~ 308 (311)
T 3nf1_A 229 EFGSVDDENKPIWMHAEEREECKGKQKDGTSFGEYGGWYKACKVDSPTVTTTLKNLGALYRRQGKFEAAETLEEAAMRSR 308 (311)
T ss_dssp HHC------CCHHHHHHHHHHC-------CCSCCCC---------CHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred cCCCCCcchHHHHHHHHHHHHhcCchhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHh
Confidence 57788999999999999999999999999999998
Q ss_pred cc
Q 011519 478 NK 479 (484)
Q Consensus 478 ~~ 479 (484)
|+
T Consensus 309 ~~ 310 (311)
T 3nf1_A 309 KQ 310 (311)
T ss_dssp C-
T ss_pred hc
Confidence 75
|
| >3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A* | Back alignment and structure |
|---|
Probab=98.95 E-value=8.2e-09 Score=98.51 Aligned_cols=109 Identities=7% Similarity=-0.122 Sum_probs=99.9
Q ss_pred hhhHHHhhhhhHhHHHHHhccC----------HHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCC--HHHHHHHHHHH
Q 011519 372 TGQMQETLNSKKKGDVAFRHKD----------FRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDM--PQEALNDASQA 439 (484)
Q Consensus 372 ~~~~~~a~~~~~~g~~~~~~~~----------~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~--~~~A~~~~~~a 439 (484)
..++.....|..++..+...+. +++++..++++|..+|. ++.+|++|+.++..+++ +++++..++++
T Consensus 58 ~~nP~~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~PK-ny~aW~hR~wlL~~l~~~~~~~EL~~~~k~ 136 (331)
T 3dss_A 58 GANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPK-SYGTWHHRCWLLSRLPEPNWARELELCARF 136 (331)
T ss_dssp TTCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHCSSCCHHHHHHHHHHH
T ss_pred HHCchhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHhccCcccHHHHHHHHHHH
Confidence 4466778888888888877665 79999999999999999 99999999999999995 99999999999
Q ss_pred HhcCCCChHHHHHHHHHHHHcCC-HHHHHHHHHHHHhcccccc
Q 011519 440 QVISPVWHMAAYLQAAALFALGK-ENEAQAALREASILENKKS 481 (484)
Q Consensus 440 l~~~p~~~~a~~~~g~~~~~~~~-~~~A~~~~~~al~l~~~~~ 481 (484)
+++||.|..||++|+.++..+|+ ++++++.+.++++.+|.+.
T Consensus 137 l~~dprNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~ 179 (331)
T 3dss_A 137 LEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNY 179 (331)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCH
T ss_pred HHhCCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCH
Confidence 99999999999999999999999 6999999999999998764
|
| >2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7 | Back alignment and structure |
|---|
Probab=98.95 E-value=3.8e-09 Score=100.78 Aligned_cols=96 Identities=8% Similarity=-0.057 Sum_probs=83.8
Q ss_pred hhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHh-cCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHH
Q 011519 380 NSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLM-SDMPQEALNDASQAQVISPVWHMAAYLQAAALF 458 (484)
Q Consensus 380 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~ 458 (484)
.+...|..+.+.|++++|+..|++|++.+|. ...+|...+..... +|++++|+..|+++++++|+++.+|..+|.++.
T Consensus 136 ~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~-~~~~~~~~a~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~ 214 (308)
T 2ond_A 136 VYIQYMKFARRAEGIKSGRMIFKKAREDART-RHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLS 214 (308)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHTSTTC-CTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 7888888888899999999999999999888 77788766665443 799999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHHHHhc
Q 011519 459 ALGKENEAQAALREASIL 476 (484)
Q Consensus 459 ~~~~~~~A~~~~~~al~l 476 (484)
.+|++++|+..|++|++.
T Consensus 215 ~~g~~~~A~~~~~~al~~ 232 (308)
T 2ond_A 215 HLNEDNNTRVLFERVLTS 232 (308)
T ss_dssp TTCCHHHHHHHHHHHHHS
T ss_pred HCCCHHHHHHHHHHHHhc
Confidence 999999999999999985
|
| >2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio} | Back alignment and structure |
|---|
Probab=98.95 E-value=1.8e-09 Score=103.01 Aligned_cols=103 Identities=13% Similarity=0.039 Sum_probs=90.5
Q ss_pred HHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCC-----CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCC----
Q 011519 376 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMV-----SPTAFARRSLSYLMSDMPQEALNDASQAQVISPVW---- 446 (484)
Q Consensus 376 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~-----~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~---- 446 (484)
..+..+...|..+.. |++++|+..|++|+++.|.. ...++.++|.+|..+|+|++|+..+++++++.|++
T Consensus 114 ~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 192 (307)
T 2ifu_A 114 TAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYP 192 (307)
T ss_dssp HHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChh
Confidence 446778889999988 99999999999999987751 15689999999999999999999999999987754
Q ss_pred --hHHHHHHHHHHHHcCCHHHHHHHHHHHHhccccc
Q 011519 447 --HMAAYLQAAALFALGKENEAQAALREASILENKK 480 (484)
Q Consensus 447 --~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 480 (484)
..+++.+|.++..+|++++|+..|++++ ++|..
T Consensus 193 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~ 227 (307)
T 2ifu_A 193 TCYKKCIAQVLVQLHRADYVAAQKCVRESY-SIPGF 227 (307)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTS
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCC
Confidence 3588899999999999999999999999 88753
|
| >3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.94 E-value=2.5e-09 Score=90.33 Aligned_cols=100 Identities=13% Similarity=0.140 Sum_probs=74.0
Q ss_pred hhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCC-C----HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCC------h
Q 011519 379 LNSKKKGDVAFRHKDFRASIECYTQFIDVGTMV-S----PTAFARRSLSYLMSDMPQEALNDASQAQVISPVW------H 447 (484)
Q Consensus 379 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~-~----~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~------~ 447 (484)
..+...|..+...|++++|+..|++++++.+.. + ..++.++|.++..+|++++|+..+++++++.+.. +
T Consensus 50 ~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~ 129 (164)
T 3ro3_A 50 IAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEG 129 (164)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHH
Confidence 356677777778888888888888887765430 1 4467777888888888888888888888877766 4
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhccc
Q 011519 448 MAAYLQAAALFALGKENEAQAALREASILEN 478 (484)
Q Consensus 448 ~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~ 478 (484)
.+++.+|.++..+|++++|+..|++++++..
T Consensus 130 ~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~ 160 (164)
T 3ro3_A 130 RACWSLGNAYTALGNHDQAMHFAEKHLEISR 160 (164)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHHH
Confidence 5677778888888888888888888877654
|
| >1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1 | Back alignment and structure |
|---|
Probab=98.94 E-value=8.4e-09 Score=96.20 Aligned_cols=99 Identities=14% Similarity=0.134 Sum_probs=88.8
Q ss_pred HHHhhhhhHhHHHHHh----ccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHh----cCCHHHHHHHHHHHHhcCCCC
Q 011519 375 MQETLNSKKKGDVAFR----HKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLM----SDMPQEALNDASQAQVISPVW 446 (484)
Q Consensus 375 ~~~a~~~~~~g~~~~~----~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~~~p~~ 446 (484)
...+..+...|..+.. .+++++|+..|+++++.+ ++.+++++|.+|.. .+++++|+..+++|++.+ +
T Consensus 35 ~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~---~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~ 109 (273)
T 1ouv_A 35 LKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN---YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK--Y 109 (273)
T ss_dssp TTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--C
T ss_pred CCCHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcC--C
Confidence 4556778889999999 999999999999999884 67899999999999 999999999999999884 8
Q ss_pred hHHHHHHHHHHHH----cCCHHHHHHHHHHHHhccc
Q 011519 447 HMAAYLQAAALFA----LGKENEAQAALREASILEN 478 (484)
Q Consensus 447 ~~a~~~~g~~~~~----~~~~~~A~~~~~~al~l~~ 478 (484)
+.+++++|.+|.. .+++++|+..|++|+++++
T Consensus 110 ~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~~ 145 (273)
T 1ouv_A 110 AEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLND 145 (273)
T ss_dssp HHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTTC
T ss_pred ccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcCc
Confidence 9999999999999 9999999999999998874
|
| >4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=98.94 E-value=2e-09 Score=99.94 Aligned_cols=106 Identities=14% Similarity=-0.017 Sum_probs=92.9
Q ss_pred hhHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcC-CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcC--CC-ChH
Q 011519 373 GQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVG-TMVSPTAFARRSLSYLMSDMPQEALNDASQAQVIS--PV-WHM 448 (484)
Q Consensus 373 ~~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~-p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~--p~-~~~ 448 (484)
..+... ..+..|..+++.++|++|+..|++++... |.....+++++|.++..+|++++|+..+++++.-. |. .+.
T Consensus 131 ~~p~~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~d 209 (282)
T 4f3v_A 131 AGSEHL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAANLALFTEAERRLTEANDSPAGEACARA 209 (282)
T ss_dssp TTCHHH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHH
T ss_pred cCCchH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccccHH
Confidence 345556 88999999999999999999999888763 22114589999999999999999999999998655 66 778
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcccc
Q 011519 449 AAYLQAAALFALGKENEAQAALREASILENK 479 (484)
Q Consensus 449 a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 479 (484)
+++++|.++..+|+.++|...|+++++.+|+
T Consensus 210 a~~~~glaL~~lGr~deA~~~l~~a~a~~P~ 240 (282)
T 4f3v_A 210 IAWYLAMARRSQGNESAAVALLEWLQTTHPE 240 (282)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc
Confidence 9999999999999999999999999999986
|
| >3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans} | Back alignment and structure |
|---|
Probab=98.93 E-value=3.1e-09 Score=100.77 Aligned_cols=109 Identities=7% Similarity=-0.050 Sum_probs=100.1
Q ss_pred hhhHHHhhhhhHhHHHH----Hhc---cCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHH--HHHHHHHHHHhc
Q 011519 372 TGQMQETLNSKKKGDVA----FRH---KDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQ--EALNDASQAQVI 442 (484)
Q Consensus 372 ~~~~~~a~~~~~~g~~~----~~~---~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~--~A~~~~~~al~~ 442 (484)
..+++....|..++..+ ... +++++++..++++++.+|. +..+|++|+.++..+|+++ ++++.++++|+.
T Consensus 97 ~~nPk~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pk-ny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~ 175 (306)
T 3dra_A 97 LDNEKNYQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPK-NHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDT 175 (306)
T ss_dssp HHCTTCCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHH
T ss_pred HHCcccHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhcccChHHHHHHHHHHHHh
Confidence 34567777888888888 655 7899999999999999999 9999999999999999999 999999999999
Q ss_pred CCCChHHHHHHHHHHHHcCC------HHHHHHHHHHHHhcccccc
Q 011519 443 SPVWHMAAYLQAAALFALGK------ENEAQAALREASILENKKS 481 (484)
Q Consensus 443 ~p~~~~a~~~~g~~~~~~~~------~~~A~~~~~~al~l~~~~~ 481 (484)
||.|..||.+|+.++..+++ ++++++.++++++++|.+.
T Consensus 176 d~~N~sAW~~R~~ll~~l~~~~~~~~~~eEl~~~~~aI~~~p~n~ 220 (306)
T 3dra_A 176 DLKNNSAWSHRFFLLFSKKHLATDNTIDEELNYVKDKIVKCPQNP 220 (306)
T ss_dssp CTTCHHHHHHHHHHHHSSGGGCCHHHHHHHHHHHHHHHHHCSSCH
T ss_pred CCCCHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHHhCCCCc
Confidence 99999999999999999998 9999999999999998764
|
| >1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=98.93 E-value=1.3e-09 Score=88.64 Aligned_cols=80 Identities=9% Similarity=-0.015 Sum_probs=67.8
Q ss_pred hhhhhhhHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCh
Q 011519 368 TEMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWH 447 (484)
Q Consensus 368 ~e~~~~~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~ 447 (484)
.......+..+..+...|..+...|++++|+..|++|++++|+ ++.+++++|.+|..+|++++|+..++++++++|++.
T Consensus 41 ~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~~ 119 (121)
T 1hxi_A 41 EAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPK-DIAVHAALAVSHTNEHNANAALASLRAWLLSQPQYE 119 (121)
T ss_dssp HHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHC------
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCC
Confidence 3344456778889999999999999999999999999999999 999999999999999999999999999999999876
Q ss_pred H
Q 011519 448 M 448 (484)
Q Consensus 448 ~ 448 (484)
.
T Consensus 120 ~ 120 (121)
T 1hxi_A 120 Q 120 (121)
T ss_dssp -
T ss_pred C
Confidence 4
|
| >2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646} | Back alignment and structure |
|---|
Probab=98.93 E-value=1.1e-08 Score=96.87 Aligned_cols=99 Identities=10% Similarity=-0.007 Sum_probs=86.7
Q ss_pred hhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCC------HHHHHHHHHHHHhcCCHHHHHHHHHHHH---hcCCCCh--
Q 011519 379 LNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVS------PTAFARRSLSYLMSDMPQEALNDASQAQ---VISPVWH-- 447 (484)
Q Consensus 379 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~------~~~~~~~a~~~~~~~~~~~A~~~~~~al---~~~p~~~-- 447 (484)
..+...|..+...|++++|+..|++|++..+. . ..+|+++|.+|..+|+|++|+..+++|+ +..|++.
T Consensus 116 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~ 194 (293)
T 2qfc_A 116 QWQYYVAAYVLKKVDYEYCILELKKLLNQQLT-GIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEF 194 (293)
T ss_dssp HHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCC-SSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHH
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhc-CCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccc
Confidence 34556788888999999999999999987654 2 5589999999999999999999999999 5566643
Q ss_pred --HHHHHHHHHHHHcCCHHHHHHHHHHHHhccc
Q 011519 448 --MAAYLQAAALFALGKENEAQAALREASILEN 478 (484)
Q Consensus 448 --~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~ 478 (484)
.+++++|.+|..+|+|++|+..|++|+++.+
T Consensus 195 ~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~ 227 (293)
T 2qfc_A 195 DVKVRYNHAKALYLDSRYEESLYQVNKAIEISC 227 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred hHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 7999999999999999999999999999864
|
| >1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A | Back alignment and structure |
|---|
Probab=98.92 E-value=6.9e-09 Score=83.38 Aligned_cols=86 Identities=16% Similarity=0.170 Sum_probs=80.4
Q ss_pred HHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHH
Q 011519 375 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQA 454 (484)
Q Consensus 375 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 454 (484)
+.....+...|..+.+.|++++|+..|+++++.+|. +..++.++|.++..+|++++|+..++++++++|++..+++.+|
T Consensus 40 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~ 118 (125)
T 1na0_A 40 PNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPN-NAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLG 118 (125)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred cCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHH
Confidence 345667888999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHcC
Q 011519 455 AALFALG 461 (484)
Q Consensus 455 ~~~~~~~ 461 (484)
.++..+|
T Consensus 119 ~~~~~~g 125 (125)
T 1na0_A 119 NAKQKQG 125 (125)
T ss_dssp HHHHHHC
T ss_pred HHHHhcc
Confidence 9988765
|
| >3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.92 E-value=3.4e-09 Score=104.21 Aligned_cols=105 Identities=11% Similarity=0.075 Sum_probs=94.2
Q ss_pred hHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCC-----CHHHHHHHHHHHHhcCCHHHHHHHHHHHHh-----cC
Q 011519 374 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMV-----SPTAFARRSLSYLMSDMPQEALNDASQAQV-----IS 443 (484)
Q Consensus 374 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~-----~~~~~~~~a~~~~~~~~~~~A~~~~~~al~-----~~ 443 (484)
....+..+...|..+...|+|++|+..|++|+++.+.. ...+++++|.+|..+|++++|+..+++|++ .+
T Consensus 180 ~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~ 259 (383)
T 3ulq_A 180 NIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNI 259 (383)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhcc
Confidence 34567788999999999999999999999999886541 124899999999999999999999999999 57
Q ss_pred -CCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhccc
Q 011519 444 -PVWHMAAYLQAAALFALGKENEAQAALREASILEN 478 (484)
Q Consensus 444 -p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~ 478 (484)
|..+.+++++|.+|..+|++++|+..|++|+++.+
T Consensus 260 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 295 (383)
T 3ulq_A 260 LPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQ 295 (383)
T ss_dssp GGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999854
|
| >4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=98.92 E-value=4.6e-09 Score=103.93 Aligned_cols=102 Identities=15% Similarity=0.128 Sum_probs=95.7
Q ss_pred HHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCH----HHHHHHHHHHHhcCCHHHHHHHHHHHHhc------CC
Q 011519 375 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSP----TAFARRSLSYLMSDMPQEALNDASQAQVI------SP 444 (484)
Q Consensus 375 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~----~~~~~~a~~~~~~~~~~~A~~~~~~al~~------~p 444 (484)
...+..+...|..++..|+|++|+..|+++++++|. ++ .+|+++|.+|..+|++++|+..+++++++ +|
T Consensus 45 ~~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 123 (411)
T 4a1s_A 45 SSMCLELALEGERLCNAGDCRAGVAFFQAAIQAGTE-DLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRL 123 (411)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred hHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhccc-ChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCch
Confidence 466777889999999999999999999999999999 76 58999999999999999999999999998 78
Q ss_pred CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcc
Q 011519 445 VWHMAAYLQAAALFALGKENEAQAALREASILE 477 (484)
Q Consensus 445 ~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~ 477 (484)
..+.+++.+|.+|..+|++++|+..|++++++.
T Consensus 124 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 156 (411)
T 4a1s_A 124 GEAKSSGNLGNTLKVMGRFDEAAICCERHLTLA 156 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 889999999999999999999999999999984
|
| >2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio} | Back alignment and structure |
|---|
Probab=98.91 E-value=2.3e-09 Score=102.31 Aligned_cols=103 Identities=12% Similarity=-0.035 Sum_probs=91.3
Q ss_pred HHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCC-----CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCC----
Q 011519 376 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMV-----SPTAFARRSLSYLMSDMPQEALNDASQAQVISPVW---- 446 (484)
Q Consensus 376 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~-----~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~---- 446 (484)
..+..+.+.|..+.+.|+|++|+..|++|+++.+.. ...++.++|.+|.. |++++|+..+++|+++.|..
T Consensus 74 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~ 152 (307)
T 2ifu_A 74 HAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLR 152 (307)
T ss_dssp HHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChh
Confidence 456788899999999999999999999999885430 24589999999999 99999999999999998754
Q ss_pred --hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccc
Q 011519 447 --HMAAYLQAAALFALGKENEAQAALREASILENK 479 (484)
Q Consensus 447 --~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 479 (484)
..+++++|.+|..+|+|++|+..|++++++.++
T Consensus 153 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~ 187 (307)
T 2ifu_A 153 QAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKE 187 (307)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 688999999999999999999999999998754
|
| >3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.91 E-value=5.6e-09 Score=99.38 Aligned_cols=102 Identities=17% Similarity=0.162 Sum_probs=93.8
Q ss_pred HhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCC----HHHHHHHHHHHHhcCCHHHHHHHHHHHHhc------CCCC
Q 011519 377 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVS----PTAFARRSLSYLMSDMPQEALNDASQAQVI------SPVW 446 (484)
Q Consensus 377 ~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~----~~~~~~~a~~~~~~~~~~~A~~~~~~al~~------~p~~ 446 (484)
....+...|..++..|++++|+..|+++++.+|. + ..++.++|.++...|++++|+..+++++++ .|..
T Consensus 4 ~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 82 (338)
T 3ro2_A 4 SCLELALEGERLCKSGDCRAGVSFFEAAVQVGTE-DLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGE 82 (338)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHhhCcc-cHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHH
Confidence 3557788999999999999999999999999999 7 468999999999999999999999999988 6677
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccc
Q 011519 447 HMAAYLQAAALFALGKENEAQAALREASILENK 479 (484)
Q Consensus 447 ~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 479 (484)
+.+++.+|.++..+|++++|+..|++++++.++
T Consensus 83 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 115 (338)
T 3ro2_A 83 AKASGNLGNTLKVLGNFDEAIVCCQRHLDISRE 115 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999998654
|
| >1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=98.90 E-value=8.5e-09 Score=82.00 Aligned_cols=83 Identities=7% Similarity=-0.024 Sum_probs=77.8
Q ss_pred hHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHH
Q 011519 374 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQ 453 (484)
Q Consensus 374 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 453 (484)
.+.....+...|..++..|++++|+..|+++++.+|. +..++.++|.++..+|++++|+..++++++++|++..++..+
T Consensus 34 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l 112 (118)
T 1elw_A 34 DPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPD-WGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGL 112 (118)
T ss_dssp CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCCCHHHHHHH
Confidence 3455778899999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHH
Q 011519 454 AAAL 457 (484)
Q Consensus 454 g~~~ 457 (484)
+.+.
T Consensus 113 ~~~~ 116 (118)
T 1elw_A 113 QNME 116 (118)
T ss_dssp HHHH
T ss_pred HHhh
Confidence 8875
|
| >2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=98.90 E-value=2.8e-09 Score=84.07 Aligned_cols=72 Identities=13% Similarity=0.083 Sum_probs=69.1
Q ss_pred cCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccc
Q 011519 407 VGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENK 479 (484)
Q Consensus 407 ~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 479 (484)
++|+ ++.+++++|.++...|++++|+..++++++++|+++.+++.+|.++..+|++++|+..|+++++++|+
T Consensus 1 l~p~-~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~ 72 (112)
T 2kck_A 1 MVDQ-NPEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIED 72 (112)
T ss_dssp CCCS-STTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCC
T ss_pred CCCC-cHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcc
Confidence 4677 88899999999999999999999999999999999999999999999999999999999999999887
|
| >2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.90 E-value=1.5e-08 Score=84.48 Aligned_cols=81 Identities=11% Similarity=0.051 Sum_probs=76.5
Q ss_pred hhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 011519 378 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAAL 457 (484)
Q Consensus 378 a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 457 (484)
...+...|..++..|+|++|+..|+++++++|. ++.+++++|.++..+|++++|+..++++++++|++..++..++.+.
T Consensus 65 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~ 143 (148)
T 2dba_A 65 AVLHRNRAACHLKLEDYDKAETEASKAIEKDGG-DVKALYRRSQALEKLGRLDQAVLDLQRCVSLEPKNKVFQEALRNIS 143 (148)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSC-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHhhCcc-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 778899999999999999999999999999999 9999999999999999999999999999999999999998888775
Q ss_pred HH
Q 011519 458 FA 459 (484)
Q Consensus 458 ~~ 459 (484)
..
T Consensus 144 ~~ 145 (148)
T 2dba_A 144 GP 145 (148)
T ss_dssp CS
T ss_pred hh
Confidence 43
|
| >3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A* | Back alignment and structure |
|---|
Probab=98.90 E-value=8.1e-09 Score=98.53 Aligned_cols=109 Identities=9% Similarity=0.011 Sum_probs=101.1
Q ss_pred hhhHHHhhhhhHhHHHHHhcc--CHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCC-HHHHHHHHHHHHhcCCCChH
Q 011519 372 TGQMQETLNSKKKGDVAFRHK--DFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDM-PQEALNDASQAQVISPVWHM 448 (484)
Q Consensus 372 ~~~~~~a~~~~~~g~~~~~~~--~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~-~~~A~~~~~~al~~~p~~~~ 448 (484)
..++.....|..++..+.+.+ .+++++..++++++.+|. |..+|++|+.++..+|. ++++++.++++|+.+|.|..
T Consensus 102 ~~~PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dpr-Ny~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~N~S 180 (331)
T 3dss_A 102 RVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADER-NFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYS 180 (331)
T ss_dssp HHCTTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSCCHH
T ss_pred HhCCCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCCCHH
Confidence 445678889999999998888 499999999999999999 99999999999999999 69999999999999999999
Q ss_pred HHHHHHHHHHHc--------------CCHHHHHHHHHHHHhcccccc
Q 011519 449 AAYLQAAALFAL--------------GKENEAQAALREASILENKKS 481 (484)
Q Consensus 449 a~~~~g~~~~~~--------------~~~~~A~~~~~~al~l~~~~~ 481 (484)
||++++.++..+ +.++++++.+.+|+.++|.+.
T Consensus 181 AW~~R~~ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~~P~d~ 227 (331)
T 3dss_A 181 SWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQ 227 (331)
T ss_dssp HHHHHHHHHHHHSCCC------CCCHHHHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHhCCCCH
Confidence 999999999888 569999999999999999764
|
| >4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.89 E-value=3.7e-09 Score=106.78 Aligned_cols=105 Identities=10% Similarity=-0.006 Sum_probs=92.5
Q ss_pred hHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhc-------------------CCHHHHHH
Q 011519 374 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMS-------------------DMPQEALN 434 (484)
Q Consensus 374 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~-------------------~~~~~A~~ 434 (484)
.+.....+...|..+...|++++|+..|++|++.+|+ ++.+|+++|.+|... +.+++|+.
T Consensus 243 ~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~ 321 (472)
T 4g1t_A 243 APGVTDVLRSAAKFYRRKDEPDKAIELLKKALEYIPN-NAYLHCQIGCCYRAKVFQVMNLRENGMYGKRKLLELIGHAVA 321 (472)
T ss_dssp CSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCC-hHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhHHHHHH
Confidence 4556677889999999999999999999999999999 999999999888653 34678999
Q ss_pred HHHHHHhcCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccc
Q 011519 435 DASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENK 479 (484)
Q Consensus 435 ~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 479 (484)
.+.++++++|.++.+++.+|.+|..+|++++|+..|++|++++++
T Consensus 322 ~~~~a~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~kaL~~~~~ 366 (472)
T 4g1t_A 322 HLKKADEANDNLFRVCSILASLHALADQYEEAEYYFQKEFSKELT 366 (472)
T ss_dssp HHHHHHHHCTTTCCCHHHHHHHHHHTTCHHHHHHHHHHHHHSCCC
T ss_pred HHHHHhhcCCchhhhhhhHHHHHHHhccHHHHHHHHHHHHhcCCC
Confidence 999999999999999999999999999999999999999988754
|
| >2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=98.89 E-value=4.8e-09 Score=81.45 Aligned_cols=66 Identities=20% Similarity=0.117 Sum_probs=62.7
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChH-HHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 416 FARRSLSYLMSDMPQEALNDASQAQVISPVWHM-AAYLQAAALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 416 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~-a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
.+++|.++...|++++|+..++++++++|+++. +|+.+|.+|..+|++++|++.|+++++++|++.
T Consensus 3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~ 69 (99)
T 2kc7_A 3 QLKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSP 69 (99)
T ss_dssp THHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTST
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcH
Confidence 367899999999999999999999999999999 999999999999999999999999999998754
|
| >3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B* | Back alignment and structure |
|---|
Probab=98.89 E-value=8e-09 Score=85.17 Aligned_cols=75 Identities=15% Similarity=0.102 Sum_probs=69.1
Q ss_pred hcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 406 DVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 406 ~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
..+|. ++..++++|.+++..|+|++|+..+.++++++|+++.+|+++|.++..+|++++|+..|+++++++|++.
T Consensus 3 ~~~~~-~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~ 77 (137)
T 3q49_B 3 HMKSP-SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSV 77 (137)
T ss_dssp ---CC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred CCccc-cHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhH
Confidence 35667 8899999999999999999999999999999999999999999999999999999999999999998753
|
| >3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=98.88 E-value=4.9e-09 Score=92.70 Aligned_cols=105 Identities=12% Similarity=-0.055 Sum_probs=84.8
Q ss_pred hHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhc---CCC---CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCC-
Q 011519 374 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDV---GTM---VSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVW- 446 (484)
Q Consensus 374 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~---~p~---~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~- 446 (484)
....+..+...|..+...|++++|+..|++++++ .++ ....++.++|.++..+|++++|+..+++++++.+..
T Consensus 62 ~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~ 141 (203)
T 3gw4_A 62 HTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQAD 141 (203)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcc
Confidence 4556778888899999999999999999999887 332 134578889999999999999999999999985432
Q ss_pred -----hHHHHHHHHHHHHcCCHHHHHHHHHHHHhccc
Q 011519 447 -----HMAAYLQAAALFALGKENEAQAALREASILEN 478 (484)
Q Consensus 447 -----~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~ 478 (484)
+.++..+|.++..+|++++|+..|++|+++..
T Consensus 142 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 178 (203)
T 3gw4_A 142 DQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFA 178 (203)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHH
Confidence 34568889999999999999999999988764
|
| >3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.88 E-value=6.3e-09 Score=87.76 Aligned_cols=104 Identities=10% Similarity=0.062 Sum_probs=91.7
Q ss_pred HHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCC-CC----HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCC---
Q 011519 375 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTM-VS----PTAFARRSLSYLMSDMPQEALNDASQAQVISPVW--- 446 (484)
Q Consensus 375 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~-~~----~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~--- 446 (484)
...+..+...|..++..|++++|+..|++++++.+. .+ ..++.++|.++..+|++++|+..+++++++.+..
T Consensus 6 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~ 85 (164)
T 3ro3_A 6 AAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDR 85 (164)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCc
Confidence 456778899999999999999999999999987542 12 3489999999999999999999999999887653
Q ss_pred ---hHHHHHHHHHHHHcCCHHHHHHHHHHHHhccc
Q 011519 447 ---HMAAYLQAAALFALGKENEAQAALREASILEN 478 (484)
Q Consensus 447 ---~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~ 478 (484)
+.+++++|.++..+|++++|+..|++++++.+
T Consensus 86 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~ 120 (164)
T 3ro3_A 86 AVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQ 120 (164)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 77999999999999999999999999998743
|
| >3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.88 E-value=6.9e-09 Score=102.04 Aligned_cols=102 Identities=17% Similarity=0.154 Sum_probs=93.9
Q ss_pred HhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCH----HHHHHHHHHHHhcCCHHHHHHHHHHHHhc------CCCC
Q 011519 377 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSP----TAFARRSLSYLMSDMPQEALNDASQAQVI------SPVW 446 (484)
Q Consensus 377 ~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~----~~~~~~a~~~~~~~~~~~A~~~~~~al~~------~p~~ 446 (484)
.+..+...|..++..|++++|+..|+++++++|. ++ .++.++|.++...|++++|+..+++++++ .|..
T Consensus 8 ~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 86 (406)
T 3sf4_A 8 SCLELALEGERLCKSGDCRAGVSFFEAAVQVGTE-DLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGE 86 (406)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCS-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCcc-cHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccccHHH
Confidence 4556788999999999999999999999999998 74 58999999999999999999999999988 5677
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccc
Q 011519 447 HMAAYLQAAALFALGKENEAQAALREASILENK 479 (484)
Q Consensus 447 ~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 479 (484)
+.+++.+|.+|..+|++++|+..|++|+++.++
T Consensus 87 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 119 (406)
T 3sf4_A 87 AKASGNLGNTLKVLGNFDEAIVCCQRHLDISRE 119 (406)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh
Confidence 899999999999999999999999999998764
|
| >3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A* | Back alignment and structure |
|---|
Probab=98.87 E-value=5.3e-09 Score=100.27 Aligned_cols=111 Identities=8% Similarity=-0.132 Sum_probs=102.8
Q ss_pred hhhhhHHHhhhhhHhHHHHHhc-c-CHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHH--------HHHHHHHHH
Q 011519 370 MWTGQMQETLNSKKKGDVAFRH-K-DFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQ--------EALNDASQA 439 (484)
Q Consensus 370 ~~~~~~~~a~~~~~~g~~~~~~-~-~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~--------~A~~~~~~a 439 (484)
+...+++....|..++..+.+. + +++++++.++++|+.+|. +..+|++|+.++..+|+++ ++++.++++
T Consensus 115 ~L~~nPKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpk-Ny~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~ 193 (349)
T 3q7a_A 115 FAVQNLKSYQVWHHRLLLLDRISPQDPVSEIEYIHGSLLPDPK-NYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEM 193 (349)
T ss_dssp HHHTTCCCHHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTT-CHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHH
T ss_pred HHHhCCCcHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHH
Confidence 3345677888999999999887 7 999999999999999999 9999999999999999988 999999999
Q ss_pred HhcCCCChHHHHHHHHHHHHcCC-------HHHHHHHHHHHHhcccccc
Q 011519 440 QVISPVWHMAAYLQAAALFALGK-------ENEAQAALREASILENKKS 481 (484)
Q Consensus 440 l~~~p~~~~a~~~~g~~~~~~~~-------~~~A~~~~~~al~l~~~~~ 481 (484)
|+.+|.|..||++|+.++..+++ ++++++.++++++++|.+.
T Consensus 194 I~~dp~N~SAW~~R~~lL~~l~~~~~~~~~~~eELe~~~~aI~~~P~n~ 242 (349)
T 3q7a_A 194 LRVDGRNNSAWGWRWYLRVSRPGAETSSRSLQDELIYILKSIHLIPHNV 242 (349)
T ss_dssp HHHCTTCHHHHHHHHHHHTTSTTCCCCHHHHHHHHHHHHHHHHHCTTCH
T ss_pred HHhCCCCHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHhCCCCH
Confidence 99999999999999999999997 7999999999999999764
|
| >3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A | Back alignment and structure |
|---|
Probab=98.87 E-value=5.6e-09 Score=98.78 Aligned_cols=100 Identities=10% Similarity=-0.003 Sum_probs=85.6
Q ss_pred hhhHhHHHHHhccCHHHHHHHHHHHHhcCCCC-C----HHHHHHHHHHHHhcCCHHHHHHHHHHHHh-------cCCCCh
Q 011519 380 NSKKKGDVAFRHKDFRASIECYTQFIDVGTMV-S----PTAFARRSLSYLMSDMPQEALNDASQAQV-------ISPVWH 447 (484)
Q Consensus 380 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~-~----~~~~~~~a~~~~~~~~~~~A~~~~~~al~-------~~p~~~ 447 (484)
.+...|..+...+++++|+..|++|+++.+.. + ..+++++|.+|..+|+|++|+..+++|++ ..+..+
T Consensus 117 ~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 196 (293)
T 3u3w_A 117 WQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDV 196 (293)
T ss_dssp HHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHH
T ss_pred HHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHH
Confidence 34457888889999999999999999975441 2 33799999999999999999999999994 334556
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcccc
Q 011519 448 MAAYLQAAALFALGKENEAQAALREASILENK 479 (484)
Q Consensus 448 ~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 479 (484)
.+|+++|.+|..+|+|++|+..|++|+++.++
T Consensus 197 ~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~ 228 (293)
T 3u3w_A 197 KVRYNHAKALYLDSRYEESLYQVNKAIEISCR 228 (293)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 79999999999999999999999999998754
|
| >3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.86 E-value=8.9e-09 Score=97.25 Aligned_cols=102 Identities=12% Similarity=-0.008 Sum_probs=92.9
Q ss_pred hHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhc--------CCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcC--
Q 011519 374 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDV--------GTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVIS-- 443 (484)
Q Consensus 374 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~--------~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~-- 443 (484)
....+..+...|..+...|++++|+..|++++++ .|. ...++.++|.++..+|++++|+..+++++++.
T Consensus 65 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 143 (311)
T 3nf1_A 65 HPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPA-VAATLNNLAVLYGKRGKYKEAEPLCKRALEIREK 143 (311)
T ss_dssp SHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHH-HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChH-HHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH
Confidence 4566778899999999999999999999999987 344 56789999999999999999999999999884
Q ss_pred ------CCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Q 011519 444 ------PVWHMAAYLQAAALFALGKENEAQAALREASIL 476 (484)
Q Consensus 444 ------p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l 476 (484)
|....+++.+|.++..+|++++|+..|++++++
T Consensus 144 ~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~ 182 (311)
T 3nf1_A 144 VLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEI 182 (311)
T ss_dssp HHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred hcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 778899999999999999999999999999998
|
| >3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.85 E-value=1.5e-08 Score=77.90 Aligned_cols=71 Identities=17% Similarity=0.027 Sum_probs=64.7
Q ss_pred CCCCCHHHHHHHHHHHHhcCC---HHHHHHHHHHHHhcCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccc
Q 011519 408 GTMVSPTAFARRSLSYLMSDM---PQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENK 479 (484)
Q Consensus 408 ~p~~~~~~~~~~a~~~~~~~~---~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 479 (484)
+|+ ++.++..+|.+++..++ .++|...+++|+++||+++.+++.+|.+++..|+|++|+..|+++++.+|.
T Consensus 2 ~p~-~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~ 75 (93)
T 3bee_A 2 NAV-TATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDP 75 (93)
T ss_dssp CCC-CHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCT
T ss_pred CCC-CHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Confidence 577 89999999999977666 799999999999999999999999999999999999999999999999876
|
| >3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.85 E-value=8.4e-09 Score=101.30 Aligned_cols=104 Identities=11% Similarity=0.018 Sum_probs=93.9
Q ss_pred HHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCC-----CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHh-----cCC
Q 011519 375 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTM-----VSPTAFARRSLSYLMSDMPQEALNDASQAQV-----ISP 444 (484)
Q Consensus 375 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~-----~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~-----~~p 444 (484)
...+..+...|..+...|+|++|+..|++|+++.+. ....++.++|.+|..+|++++|+..+++|++ .+|
T Consensus 179 ~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~ 258 (378)
T 3q15_A 179 IRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPD 258 (378)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGG
T ss_pred hhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCCh
Confidence 356778889999999999999999999999987432 1245899999999999999999999999999 889
Q ss_pred CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhccc
Q 011519 445 VWHMAAYLQAAALFALGKENEAQAALREASILEN 478 (484)
Q Consensus 445 ~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~ 478 (484)
..+.+++++|.+|..+|++++|+..|++|+++.+
T Consensus 259 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 292 (378)
T 3q15_A 259 LLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHIT 292 (378)
T ss_dssp GHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC
T ss_pred hHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999854
|
| >3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.83 E-value=8.3e-09 Score=101.44 Aligned_cols=102 Identities=10% Similarity=-0.012 Sum_probs=54.2
Q ss_pred HhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCC------CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCh---
Q 011519 377 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMV------SPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWH--- 447 (484)
Q Consensus 377 ~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~------~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~--- 447 (484)
.+..+...|..++..|++++|+..|++|+++.+.. ...+++++|.+|..+|++++|+..+++|+++.|...
T Consensus 142 ~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~ 221 (383)
T 3ulq_A 142 KAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQ 221 (383)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChH
Confidence 44455555555555555555555555555543320 123455555555555555555555555555543222
Q ss_pred ---HHHHHHHHHHHHcCCHHHHHHHHHHHHhccc
Q 011519 448 ---MAAYLQAAALFALGKENEAQAALREASILEN 478 (484)
Q Consensus 448 ---~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~ 478 (484)
.+++++|.+|..+|++++|+..|++|+++..
T Consensus 222 ~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~ 255 (383)
T 3ulq_A 222 LMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFE 255 (383)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 3555555555555555555555555555433
|
| >2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis} | Back alignment and structure |
|---|
Probab=98.83 E-value=1.2e-08 Score=81.63 Aligned_cols=84 Identities=11% Similarity=-0.012 Sum_probs=72.0
Q ss_pred HHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCh--HHHHH
Q 011519 375 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWH--MAAYL 452 (484)
Q Consensus 375 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~--~a~~~ 452 (484)
+..+..+...|..++..|++++|+..|+++++++|. +..+|+++|.+|..+|++++|+..++++++++|+.. .++..
T Consensus 16 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~ 94 (115)
T 2kat_A 16 TDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPT-YSVAWKWLGKTLQGQGDRAGARQAWESGLAAAQSRGDQQVVKE 94 (115)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred CCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccccccHHHHHH
Confidence 455678889999999999999999999999999999 999999999999999999999999999999998644 44444
Q ss_pred HHHHHHH
Q 011519 453 QAAALFA 459 (484)
Q Consensus 453 ~g~~~~~ 459 (484)
+...+..
T Consensus 95 l~~~l~~ 101 (115)
T 2kat_A 95 LQVFLRR 101 (115)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4444333
|
| >1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1 | Back alignment and structure |
|---|
Probab=98.82 E-value=2.8e-08 Score=92.60 Aligned_cols=99 Identities=16% Similarity=0.154 Sum_probs=88.2
Q ss_pred HhhhhhHhHHHHHh----ccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHh----cCCHHHHHHHHHHHHhcCCCChH
Q 011519 377 ETLNSKKKGDVAFR----HKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLM----SDMPQEALNDASQAQVISPVWHM 448 (484)
Q Consensus 377 ~a~~~~~~g~~~~~----~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~~~p~~~~ 448 (484)
....+...|..+.. .+++++|+..|+++++. . ++.+++++|.+|.. .+++++|+..++++++.+| +.
T Consensus 145 ~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~--~-~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~~--~~ 219 (273)
T 1ouv_A 145 DGDGCTILGSLYDAGRGTPKDLKKALASYDKACDL--K-DSPGCFNAGNMYHHGEGATKNFKEALARYSKACELEN--GG 219 (273)
T ss_dssp CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHTTC--HH
T ss_pred cHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--C-CHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHhCCC--HH
Confidence 45567788888888 89999999999999987 3 57789999999999 9999999999999999876 88
Q ss_pred HHHHHHHHHHH----cCCHHHHHHHHHHHHhccccc
Q 011519 449 AAYLQAAALFA----LGKENEAQAALREASILENKK 480 (484)
Q Consensus 449 a~~~~g~~~~~----~~~~~~A~~~~~~al~l~~~~ 480 (484)
+++++|.+|.. .+++++|+..|++|++++|++
T Consensus 220 a~~~l~~~~~~g~~~~~~~~~A~~~~~~a~~~~~~~ 255 (273)
T 1ouv_A 220 GCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKG 255 (273)
T ss_dssp HHHHHHHHHHTTSSSSCCSTTHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHcCCCcccCHHHHHHHHHHHHHcCCHH
Confidence 99999999999 999999999999999998765
|
| >2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=98.81 E-value=2.5e-08 Score=81.14 Aligned_cols=83 Identities=12% Similarity=0.009 Sum_probs=74.9
Q ss_pred hhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCC---HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHH
Q 011519 379 LNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVS---PTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAA 455 (484)
Q Consensus 379 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 455 (484)
..+...|..+++.|+|++|+..|+++++.+|+ + +.+++++|.++..+|++++|+..++++++.+|++..+...+..
T Consensus 40 ~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~-~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~ 118 (129)
T 2xev_A 40 NALYWLGESYYATRNFQLAEAQFRDLVSRYPT-HDKAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQYPGSDAARVAQER 118 (129)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-STTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHCCC-CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCChHHHHHHHH
Confidence 67889999999999999999999999999999 8 8899999999999999999999999999999999988877776
Q ss_pred HHHHcCC
Q 011519 456 ALFALGK 462 (484)
Q Consensus 456 ~~~~~~~ 462 (484)
+....++
T Consensus 119 l~~l~~~ 125 (129)
T 2xev_A 119 LQSIRLG 125 (129)
T ss_dssp HHHHC--
T ss_pred HHHHHhh
Confidence 6655544
|
| >1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=98.79 E-value=2e-08 Score=83.51 Aligned_cols=89 Identities=10% Similarity=0.008 Sum_probs=73.8
Q ss_pred cCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcC---CHHHHHHHHHHHHhcC-C-CChHHHHHHHHHHHHcCCHHHH
Q 011519 392 KDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSD---MPQEALNDASQAQVIS-P-VWHMAAYLQAAALFALGKENEA 466 (484)
Q Consensus 392 ~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~---~~~~A~~~~~~al~~~-p-~~~~a~~~~g~~~~~~~~~~~A 466 (484)
.....+.+.|.++++.++. +..+.++.|.++.+.+ ++++++..++..++.+ | +..+++|++|.+|+.+|+|++|
T Consensus 12 ~~l~~~~~~y~~e~~~~~~-~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A 90 (152)
T 1pc2_A 12 EDLLKFEKKFQSEKAAGSV-SKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKA 90 (152)
T ss_dssp HHHHHHHHHHHHHHHTTCC-CHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHH
T ss_pred HHHHHHHHHHHHHHccCCC-cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHH
Confidence 4456677788888887787 8888888888888887 6668888888888888 7 6688888888888889999999
Q ss_pred HHHHHHHHhcccccc
Q 011519 467 QAALREASILENKKS 481 (484)
Q Consensus 467 ~~~~~~al~l~~~~~ 481 (484)
.+.++++|+++|++.
T Consensus 91 ~~y~~~lL~ieP~n~ 105 (152)
T 1pc2_A 91 LKYVRGLLQTEPQNN 105 (152)
T ss_dssp HHHHHHHHHHCTTCH
T ss_pred HHHHHHHHhcCCCCH
Confidence 999998888888764
|
| >3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.77 E-value=4.8e-08 Score=87.66 Aligned_cols=104 Identities=11% Similarity=-0.033 Sum_probs=91.9
Q ss_pred HHHhhhhhHhHHHHHh----ccCHHHHHHHHHHHHhcCCC-CCHHHHHHHHHHHHh----cCCHHHHHHHHHHHHhcCCC
Q 011519 375 MQETLNSKKKGDVAFR----HKDFRASIECYTQFIDVGTM-VSPTAFARRSLSYLM----SDMPQEALNDASQAQVISPV 445 (484)
Q Consensus 375 ~~~a~~~~~~g~~~~~----~~~~~~A~~~~~~ai~~~p~-~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~~~p~ 445 (484)
...+..+...|..+.. .+++++|+..|++|++..+. ..+.+++++|.+|.. .+++++|+..+++|+++ |+
T Consensus 82 ~g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~ 160 (212)
T 3rjv_A 82 AGSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL-SR 160 (212)
T ss_dssp TTCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SC
T ss_pred CCCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CC
Confidence 3556778888999987 89999999999999999883 048899999999999 89999999999999999 78
Q ss_pred ChHHHHHHHHHHHHc-C-----CHHHHHHHHHHHHhcccc
Q 011519 446 WHMAAYLQAAALFAL-G-----KENEAQAALREASILENK 479 (484)
Q Consensus 446 ~~~a~~~~g~~~~~~-~-----~~~~A~~~~~~al~l~~~ 479 (484)
++.+++++|.+|..- | ++++|+..|++|++....
T Consensus 161 ~~~a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A~~~g~~ 200 (212)
T 3rjv_A 161 TGYAEYWAGMMFQQGEKGFIEPNKQKALHWLNVSCLEGFD 200 (212)
T ss_dssp TTHHHHHHHHHHHHCBTTTBCCCHHHHHHHHHHHHHHTCH
T ss_pred CHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHcCCH
Confidence 899999999999764 3 999999999999998653
|
| >3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.77 E-value=1.8e-08 Score=101.88 Aligned_cols=101 Identities=12% Similarity=-0.001 Sum_probs=85.9
Q ss_pred HHhhhhhHhHHHHHhccCHHHHHHHHHHHHhc-----CCCCC---HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcC----
Q 011519 376 QETLNSKKKGDVAFRHKDFRASIECYTQFIDV-----GTMVS---PTAFARRSLSYLMSDMPQEALNDASQAQVIS---- 443 (484)
Q Consensus 376 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~-----~p~~~---~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~---- 443 (484)
..+....+.+..+..+|+|++|+..|++++++ .|+ . ...++|+|.+|..+|+|++|+..+.+++++.
T Consensus 307 ~~a~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~-Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~l 385 (490)
T 3n71_A 307 QFSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADT-NLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLY 385 (490)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTT-SHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCC-CHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHc
Confidence 34445556677788999999999999999975 333 3 3579999999999999999999999999664
Q ss_pred ----CCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcc
Q 011519 444 ----PVWHMAAYLQAAALFALGKENEAQAALREASILE 477 (484)
Q Consensus 444 ----p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~ 477 (484)
|+-+..++++|.+|..+|+|++|+..|++|+++-
T Consensus 386 G~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~ 423 (490)
T 3n71_A 386 HHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAIL 423 (490)
T ss_dssp CTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 4557899999999999999999999999999863
|
| >3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.77 E-value=1.4e-08 Score=99.80 Aligned_cols=103 Identities=10% Similarity=0.062 Sum_probs=80.4
Q ss_pred HHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCH------HHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCC--
Q 011519 375 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSP------TAFARRSLSYLMSDMPQEALNDASQAQVISPVW-- 446 (484)
Q Consensus 375 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~------~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~-- 446 (484)
...+..+...|..+...|++++|+..|++++++.+. .. .++.++|.++..+|++++|+..+++++++.|..
T Consensus 184 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~ 262 (406)
T 3sf4_A 184 AAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKE-FGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKD 262 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHh-cCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCcC
Confidence 445567777888888888888888888888877554 22 278888888888888888888888888877765
Q ss_pred ----hHHHHHHHHHHHHcCCHHHHHHHHHHHHhccc
Q 011519 447 ----HMAAYLQAAALFALGKENEAQAALREASILEN 478 (484)
Q Consensus 447 ----~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~ 478 (484)
+.+++.+|.+|..+|++++|+..|++|+++.+
T Consensus 263 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~ 298 (406)
T 3sf4_A 263 RAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQ 298 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 67888888888888888888888888887754
|
| >3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=98.75 E-value=2.8e-08 Score=87.74 Aligned_cols=101 Identities=13% Similarity=0.052 Sum_probs=92.8
Q ss_pred HHhhhhhHhHHHHHhccCHHHHHHHHHHHHh------cCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc---CC--
Q 011519 376 QETLNSKKKGDVAFRHKDFRASIECYTQFID------VGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVI---SP-- 444 (484)
Q Consensus 376 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~------~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~---~p-- 444 (484)
..+..+...|..+...|++++|+..|+++++ ..+. ...++.++|.++..+|++++|+..+.+++++ .+
T Consensus 24 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 102 (203)
T 3gw4_A 24 TASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTA-EHRALHQVGMVERMAGNWDAARRCFLEERELLASLPED 102 (203)
T ss_dssp THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHH-HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCcc
Confidence 4567788899999999999999999999999 8988 8899999999999999999999999999998 33
Q ss_pred --CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcc
Q 011519 445 --VWHMAAYLQAAALFALGKENEAQAALREASILE 477 (484)
Q Consensus 445 --~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~ 477 (484)
..+.+++++|.++..+|++++|+..|++++++.
T Consensus 103 ~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 137 (203)
T 3gw4_A 103 PLAASANAYEVATVALHFGDLAGARQEYEKSLVYA 137 (203)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 446789999999999999999999999999874
|
| >3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A | Back alignment and structure |
|---|
Probab=98.74 E-value=9.6e-08 Score=91.44 Aligned_cols=74 Identities=14% Similarity=0.048 Sum_probs=66.9
Q ss_pred HhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhccccc
Q 011519 405 IDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKK 480 (484)
Q Consensus 405 i~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 480 (484)
+..+|. ++.+|..++.+++..|++++|+..+++|+.++|+ +.+|..+|.++...|++++|++.|++|++++|..
T Consensus 270 ~~~~~~-~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~ 343 (372)
T 3ly7_A 270 LPELNN-LSIIYQIKAVSALVKGKTDESYQAINTGIDLEMS-WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGA 343 (372)
T ss_dssp CGGGTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSH
T ss_pred cccCCc-CHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCc
Confidence 356677 7888888888888899999999999999999985 7899999999999999999999999999999864
|
| >4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=98.74 E-value=1.5e-08 Score=100.10 Aligned_cols=103 Identities=13% Similarity=0.059 Sum_probs=80.7
Q ss_pred HHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCH------HHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCC--
Q 011519 375 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSP------TAFARRSLSYLMSDMPQEALNDASQAQVISPVW-- 446 (484)
Q Consensus 375 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~------~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~-- 446 (484)
...+..+...|..++..|++++|+..|++++++.+. .. .++.++|.+|..+|++++|+..+++++++.|..
T Consensus 220 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~ 298 (411)
T 4a1s_A 220 GAQGRACGNLGNTYYLLGDFQAAIEHHQERLRIARE-FGDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELGE 298 (411)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-HTCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHh-cCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCC
Confidence 345567777888888888888888888888887664 22 277888888888888888888888888887754
Q ss_pred ----hHHHHHHHHHHHHcCCHHHHHHHHHHHHhccc
Q 011519 447 ----HMAAYLQAAALFALGKENEAQAALREASILEN 478 (484)
Q Consensus 447 ----~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~ 478 (484)
+.+++.+|.+|..+|++++|+..|++++++.+
T Consensus 299 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 334 (411)
T 4a1s_A 299 REVEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQ 334 (411)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 67888888888888888888888888887754
|
| >3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.72 E-value=2.6e-08 Score=94.69 Aligned_cols=104 Identities=10% Similarity=0.073 Sum_probs=73.0
Q ss_pred HHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCC-----CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCC---
Q 011519 375 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMV-----SPTAFARRSLSYLMSDMPQEALNDASQAQVISPVW--- 446 (484)
Q Consensus 375 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~-----~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~--- 446 (484)
...+..+...|..++..|++++|+..|++++++.+.. ...++.++|.++..+|++++|+..+++++++.|..
T Consensus 180 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~ 259 (338)
T 3ro2_A 180 AAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDR 259 (338)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhcch
Confidence 3445566777777777777777777777777664430 12267777777777777777777777777776655
Q ss_pred ---hHHHHHHHHHHHHcCCHHHHHHHHHHHHhccc
Q 011519 447 ---HMAAYLQAAALFALGKENEAQAALREASILEN 478 (484)
Q Consensus 447 ---~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~ 478 (484)
..+++.+|.++..+|++++|+..|++++++.+
T Consensus 260 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~ 294 (338)
T 3ro2_A 260 AVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQ 294 (338)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 66777777777777777777777777777653
|
| >3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* | Back alignment and structure |
|---|
Probab=98.72 E-value=4.1e-08 Score=97.72 Aligned_cols=92 Identities=12% Similarity=-0.088 Sum_probs=79.0
Q ss_pred HHHHHhccCHHHHHHHHHHHHhc-----CCCCCH---HHHHHHHHHHHhcCCHHHHHHHHHHHHhc--------CCCChH
Q 011519 385 GDVAFRHKDFRASIECYTQFIDV-----GTMVSP---TAFARRSLSYLMSDMPQEALNDASQAQVI--------SPVWHM 448 (484)
Q Consensus 385 g~~~~~~~~~~~A~~~~~~ai~~-----~p~~~~---~~~~~~a~~~~~~~~~~~A~~~~~~al~~--------~p~~~~ 448 (484)
+......|+|++|+..|++++++ .|+ ++ ..++|+|.+|..+|+|++|+..+++++++ .|+-+.
T Consensus 305 ~~~~~~~g~~~eA~~~~~~~L~i~~~~lg~~-Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~ 383 (433)
T 3qww_A 305 FRRAKHYKSPSELLEICELSQEKMSSVFEDS-NVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVAS 383 (433)
T ss_dssp HHHHTTTSCHHHHHHHHHHHHHHHTTTBCTT-SHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHH
T ss_pred HHHhhhccCHHHHHHHHHHHHHHhhCccChh-chHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHH
Confidence 33344678999999999999974 444 43 47999999999999999999999999966 356678
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhcc
Q 011519 449 AAYLQAAALFALGKENEAQAALREASILE 477 (484)
Q Consensus 449 a~~~~g~~~~~~~~~~~A~~~~~~al~l~ 477 (484)
.++++|.+|..+|+|++|+..|++|+++-
T Consensus 384 ~l~nLa~~~~~qg~~~eA~~~~~~Al~i~ 412 (433)
T 3qww_A 384 MWLKLGRLYMGLENKAAGEKALKKAIAIM 412 (433)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999873
|
| >3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.69 E-value=5.3e-08 Score=87.40 Aligned_cols=98 Identities=11% Similarity=-0.012 Sum_probs=77.8
Q ss_pred HHHhhhhhHhHHHHHhcc----CHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHh----cCCHHHHHHHHHHHHhcCC--
Q 011519 375 MQETLNSKKKGDVAFRHK----DFRASIECYTQFIDVGTMVSPTAFARRSLSYLM----SDMPQEALNDASQAQVISP-- 444 (484)
Q Consensus 375 ~~~a~~~~~~g~~~~~~~----~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~~~p-- 444 (484)
...+..+...|..+.. + ++++|+..|++|++ +. ++.+++++|.+|.. .+++++|+..+.+|++..|
T Consensus 47 ~g~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~--~g-~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~ 122 (212)
T 3rjv_A 47 QGDGDALALLAQLKIR-NPQQADYPQARQLAEKAVE--AG-SKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESD 122 (212)
T ss_dssp TTCHHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHH--TT-CHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSH
T ss_pred cCCHHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHH--CC-CHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCc
Confidence 3456677777777776 6 78888888888855 35 67788888888887 7888888888888888887
Q ss_pred CChHHHHHHHHHHHH----cCCHHHHHHHHHHHHhc
Q 011519 445 VWHMAAYLQAAALFA----LGKENEAQAALREASIL 476 (484)
Q Consensus 445 ~~~~a~~~~g~~~~~----~~~~~~A~~~~~~al~l 476 (484)
+++.+++++|.+|.. .+++++|+..|++|+++
T Consensus 123 ~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~ 158 (212)
T 3rjv_A 123 AAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL 158 (212)
T ss_dssp HHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT
T ss_pred chHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc
Confidence 458888888888888 88888888888888876
|
| >3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A* | Back alignment and structure |
|---|
Probab=98.67 E-value=6.5e-08 Score=92.14 Aligned_cols=134 Identities=13% Similarity=0.044 Sum_probs=93.7
Q ss_pred cccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCC---ceeeeeeeee-eCCceEEEEecCCC
Q 011519 62 VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNR---RLANLLGCCC-EGDERLLVAEYMPN 137 (484)
Q Consensus 62 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hp---niv~l~~~~~-~~~~~~lv~Ey~~~ 137 (484)
+..++.|....||+. +..++||+... ......+.+|+.+|+.+.+. .|.+++.++. ..+..++||||++|
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 345688888899988 46788998532 12346788999999999642 3556666653 34567899999999
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcC-------------------------------------------
Q 011519 138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK------------------------------------------- 174 (484)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~------------------------------------------- 174 (484)
.+|.+... ..++..+...++.+++..|..||+.
T Consensus 98 ~~l~~~~~----~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~ 173 (306)
T 3tdw_A 98 QILGEDGM----AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLT 173 (306)
T ss_dssp EECHHHHH----TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHH
T ss_pred eECchhhh----hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHH
Confidence 88876321 1245555555666666666555542
Q ss_pred ----------------CCcccccccccceeecC---CCCc-eeeccCCccc
Q 011519 175 ----------------ERALYHDLNAYRIVFDD---DVNP-RLSCFGLMKN 205 (484)
Q Consensus 175 ----------------~~ivH~Dlkp~Nill~~---~~~~-kl~DfG~a~~ 205 (484)
..++|+|++|.|||++. ++.+ .|+||+.+..
T Consensus 174 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 174 LRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 13589999999999987 4564 7999997654
|
| >1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1 | Back alignment and structure |
|---|
Probab=98.66 E-value=1.8e-07 Score=77.67 Aligned_cols=91 Identities=12% Similarity=0.004 Sum_probs=84.4
Q ss_pred hHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHh----cCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHH
Q 011519 384 KGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLM----SDMPQEALNDASQAQVISPVWHMAAYLQAAALFA 459 (484)
Q Consensus 384 ~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~ 459 (484)
.|..+...+.+++|+..|++|.+. . ++.+++++|.+|.. .+++++|+..+++|.+. +++.+++++|.+|..
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~--g-~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~ 105 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACEL--N-SGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYA 105 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcC--C-CHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC--CCHHHHHHHHHHHHC
Confidence 788888888999999999999998 4 78899999999999 89999999999999987 789999999999999
Q ss_pred ----cCCHHHHHHHHHHHHhcccc
Q 011519 460 ----LGKENEAQAALREASILENK 479 (484)
Q Consensus 460 ----~~~~~~A~~~~~~al~l~~~ 479 (484)
.+++++|+..|++|.+++..
T Consensus 106 G~g~~~d~~~A~~~~~~Aa~~g~~ 129 (138)
T 1klx_A 106 GKGVVKNEKQAVKTFEKACRLGSE 129 (138)
T ss_dssp TSSSCCCHHHHHHHHHHHHHTTCH
T ss_pred CCCCCcCHHHHHHHHHHHHHCCCH
Confidence 99999999999999998643
|
| >2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A | Back alignment and structure |
|---|
Probab=98.65 E-value=1.7e-07 Score=73.70 Aligned_cols=78 Identities=13% Similarity=-0.006 Sum_probs=69.9
Q ss_pred hhhhhHhHHHHHhccCHHHHHHHHHHHHhcC-------CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHH
Q 011519 378 TLNSKKKGDVAFRHKDFRASIECYTQFIDVG-------TMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAA 450 (484)
Q Consensus 378 a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~-------p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~ 450 (484)
+......|..+++.++|..|+..|++|++.. +. ...++.++|.|+.++|++++|+..+++|++++|++..+.
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~-~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~ 83 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTID-KVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRAN 83 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSC-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCccc-HHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHH
Confidence 4567789999999999999999999999863 23 577999999999999999999999999999999999998
Q ss_pred HHHHHH
Q 011519 451 YLQAAA 456 (484)
Q Consensus 451 ~~~g~~ 456 (484)
.+++..
T Consensus 84 ~n~~~~ 89 (104)
T 2v5f_A 84 GNLKYF 89 (104)
T ss_dssp HHHHHH
T ss_pred hhHHHH
Confidence 888743
|
| >1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A | Back alignment and structure |
|---|
Probab=98.64 E-value=4.5e-08 Score=79.28 Aligned_cols=86 Identities=17% Similarity=0.128 Sum_probs=77.3
Q ss_pred HHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCC-------HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCh
Q 011519 375 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVS-------PTAFARRSLSYLMSDMPQEALNDASQAQVISPVWH 447 (484)
Q Consensus 375 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~-------~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~ 447 (484)
+.....+...|..++..|++++|+..|+++++.+|. + ..+++++|.++..+|++++|+..++++++++| +.
T Consensus 35 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~-~~ 112 (131)
T 1elr_A 35 PTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRE-NREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHR-TP 112 (131)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH-STTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC-CH
T ss_pred CccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccc-cchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC-CH
Confidence 445677889999999999999999999999999887 6 88999999999999999999999999999999 68
Q ss_pred HHHHHHHHHHHHcCC
Q 011519 448 MAAYLQAAALFALGK 462 (484)
Q Consensus 448 ~a~~~~g~~~~~~~~ 462 (484)
..+..++.++..+++
T Consensus 113 ~~~~~l~~~~~~~~~ 127 (131)
T 1elr_A 113 DVLKKCQQAEKILKE 127 (131)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 888888888766543
|
| >3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.63 E-value=6.8e-08 Score=94.76 Aligned_cols=105 Identities=12% Similarity=0.037 Sum_probs=79.2
Q ss_pred hHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCC------CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCC---
Q 011519 374 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMV------SPTAFARRSLSYLMSDMPQEALNDASQAQVISP--- 444 (484)
Q Consensus 374 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~------~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p--- 444 (484)
....+..+...|..++..|++++|+..|++|+++.+.. ...+++++|.+|..+|++++|+..+.+|+++.+
T Consensus 137 ~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~ 216 (378)
T 3q15_A 137 DIEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQ 216 (378)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcC
Confidence 34566777888888888888888888888888764430 234677888888888888888888888888854
Q ss_pred ---CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhccc
Q 011519 445 ---VWHMAAYLQAAALFALGKENEAQAALREASILEN 478 (484)
Q Consensus 445 ---~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~ 478 (484)
..+.+++++|.+|..+|++++|+..|++|+++..
T Consensus 217 ~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~ 253 (378)
T 3q15_A 217 NDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSR 253 (378)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 2346788888888888888888888888887654
|
| >4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A* | Back alignment and structure |
|---|
Probab=98.58 E-value=1.9e-07 Score=87.14 Aligned_cols=126 Identities=16% Similarity=0.047 Sum_probs=90.6
Q ss_pred ceEEEEEe-CCCcEEEEEEecCCCCccHHHHHHHHHHHhcCC-CCceeeeeeeeeeCCceEEEEecCCCCCHHhhhccCC
Q 011519 71 NVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWE 148 (484)
Q Consensus 71 g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~ 148 (484)
+.||+... .++..++||+-... ....+.+|...|+.+. +--|.++++++.+.+..|+|||+++|.++.+....
T Consensus 39 ~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~~~~~-- 113 (272)
T 4gkh_A 39 ATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQVLEE-- 113 (272)
T ss_dssp CEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHHHHHH--
T ss_pred CeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccccccccC--
Confidence 46999884 45678999986532 3556888999998884 43477888888888999999999999888775431
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhhcC------------------------------------------------------
Q 011519 149 TQPMKWAMRLRVALHIAEALEYCTSK------------------------------------------------------ 174 (484)
Q Consensus 149 ~~~l~~~~~~~i~~qi~~~L~~lH~~------------------------------------------------------ 174 (484)
.......+..+++..|.-||+.
T Consensus 114 ----~~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 189 (272)
T 4gkh_A 114 ----YPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHKLLPF 189 (272)
T ss_dssp ----CGGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHHHTTCCC
T ss_pred ----CHHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHHHhcccc
Confidence 1122234455555555555531
Q ss_pred ---CCcccccccccceeecCCCCceeeccCCccc
Q 011519 175 ---ERALYHDLNAYRIVFDDDVNPRLSCFGLMKN 205 (484)
Q Consensus 175 ---~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 205 (484)
..++|+|+.+.|||+++++.+-|+||+.+..
T Consensus 190 ~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 190 SPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp CCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred cCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 1268999999999999877777999987643
|
| >3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* | Back alignment and structure |
|---|
Probab=98.58 E-value=1.4e-07 Score=93.93 Aligned_cols=98 Identities=15% Similarity=0.048 Sum_probs=83.1
Q ss_pred hhhhhHhHHHHHhccCHHHHHHHHHHHHhc-----CCCCCH---HHHHHHHHHHHhcCCHHHHHHHHHHHHhcC------
Q 011519 378 TLNSKKKGDVAFRHKDFRASIECYTQFIDV-----GTMVSP---TAFARRSLSYLMSDMPQEALNDASQAQVIS------ 443 (484)
Q Consensus 378 a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~-----~p~~~~---~~~~~~a~~~~~~~~~~~A~~~~~~al~~~------ 443 (484)
+.........+.++|+|++|+..|++++++ .|+ ++ ..+.|+|.+|..+|+|++|+..+.+++++.
T Consensus 287 ~~~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~-h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~ 365 (429)
T 3qwp_A 287 VQESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPDI-NIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPG 365 (429)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTT-SHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCS
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCcc-chHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCC
Confidence 334445566677889999999999999975 333 33 479999999999999999999999999653
Q ss_pred --CCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Q 011519 444 --PVWHMAAYLQAAALFALGKENEAQAALREASIL 476 (484)
Q Consensus 444 --p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l 476 (484)
|+-+..++++|.+|..+|++++|+..|++|+++
T Consensus 366 ~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i 400 (429)
T 3qwp_A 366 SHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDI 400 (429)
T ss_dssp SCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 455788999999999999999999999999986
|
| >2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7 | Back alignment and structure |
|---|
Probab=98.54 E-value=3.2e-07 Score=94.28 Aligned_cols=104 Identities=5% Similarity=-0.143 Sum_probs=78.0
Q ss_pred hHHHhhhhhHhHHHHHh-------ccCHH-------HHHHHHHHHHh-cCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHH
Q 011519 374 QMQETLNSKKKGDVAFR-------HKDFR-------ASIECYTQFID-VGTMVSPTAFARRSLSYLMSDMPQEALNDASQ 438 (484)
Q Consensus 374 ~~~~a~~~~~~g~~~~~-------~~~~~-------~A~~~~~~ai~-~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~ 438 (484)
.+.....|...|..+.+ .|+++ +|+..|++|++ ++|+ +..+|.++|..+...|++++|...|++
T Consensus 268 ~p~~~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~-~~~l~~~~~~~~~~~g~~~~A~~~~~~ 346 (530)
T 2ooe_A 268 LGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKK-NMLLYFAYADYEESRMKYEKVHSIYNR 346 (530)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSS-CHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 34556667777776664 57776 78888888886 6787 788888888888888888888888888
Q ss_pred HHhcCCCCh-HHHHHHHHHHHHcCCHHHHHHHHHHHHhccc
Q 011519 439 AQVISPVWH-MAAYLQAAALFALGKENEAQAALREASILEN 478 (484)
Q Consensus 439 al~~~p~~~-~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~ 478 (484)
+++++|.++ .+|...|.++..+|++++|++.|++|++..|
T Consensus 347 al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~ 387 (530)
T 2ooe_A 347 LLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDAR 387 (530)
T ss_dssp HHHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTT
T ss_pred HhCccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccC
Confidence 888888774 5777777777777777777777777776654
|
| >4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=98.51 E-value=1.8e-07 Score=86.78 Aligned_cols=94 Identities=13% Similarity=0.049 Sum_probs=83.6
Q ss_pred hHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcC-CCC-hHHHHHHHHHHHH
Q 011519 382 KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVIS-PVW-HMAAYLQAAALFA 459 (484)
Q Consensus 382 ~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~-p~~-~~a~~~~g~~~~~ 459 (484)
...+..+...|+|++|.+.|+.++..+|. +. +++.+|.++++.++|++|+..++++++.. |.+ ..+++++|.++..
T Consensus 106 LayA~~L~~~g~y~eA~~~l~~~~~~~p~-~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~ 183 (282)
T 4f3v_A 106 MGFAACEAAQGNYADAMEALEAAPVAGSE-HL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAAN 183 (282)
T ss_dssp HHHHHHHHHHTCHHHHHHHHTSSCCTTCH-HH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHhcCCc-hH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHH
Confidence 34578888999999999999999999998 77 99999999999999999999999998864 332 4699999999999
Q ss_pred cCCHHHHHHHHHHHHhcc
Q 011519 460 LGKENEAQAALREASILE 477 (484)
Q Consensus 460 ~~~~~~A~~~~~~al~l~ 477 (484)
+|++++|+..|++++.-.
T Consensus 184 LG~~~eAl~~l~~a~~g~ 201 (282)
T 4f3v_A 184 LALFTEAERRLTEANDSP 201 (282)
T ss_dssp TTCHHHHHHHHHHHHTST
T ss_pred CCCHHHHHHHHHHHhcCC
Confidence 999999999999998543
|
| >3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A* | Back alignment and structure |
|---|
Probab=98.51 E-value=1e-07 Score=92.90 Aligned_cols=81 Identities=5% Similarity=-0.050 Sum_probs=56.1
Q ss_pred cccC-CCCCCceEEEEEeC-------CCcEEEEEEecCCC---CccHHHHHHHHHHHhcCC-C--CceeeeeeeeeeC--
Q 011519 62 VSEH-GEKAPNVVYKGKLE-------NQFRIAVKRFNRSA---WPDARQFLEEARAVGQLR-N--RRLANLLGCCCEG-- 125 (484)
Q Consensus 62 ~~~l-G~G~~g~Vy~~~~~-------~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h--pniv~l~~~~~~~-- 125 (484)
++.| +.|..+.+|+.... +++.+++|+..... ......+.+|+.+++.+. + -.+.+++.++.+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 4566 78888999998754 26678999865422 111245678888888874 3 3567777776554
Q ss_pred -CceEEEEecCCCCCHHh
Q 011519 126 -DERLLVAEYMPNDTLAK 142 (484)
Q Consensus 126 -~~~~lv~Ey~~~gsL~~ 142 (484)
+..|+||||++|.++.+
T Consensus 105 ~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp TSSCEEEEECCCCBCCCB
T ss_pred cCCceEEEEecCCCChhh
Confidence 35789999999877654
|
| >2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7 | Back alignment and structure |
|---|
Probab=98.46 E-value=6e-07 Score=92.26 Aligned_cols=100 Identities=10% Similarity=-0.016 Sum_probs=76.8
Q ss_pred hhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHH-HHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 011519 379 LNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLS-YLMSDMPQEALNDASQAQVISPVWHMAAYLQAAAL 457 (484)
Q Consensus 379 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~-~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 457 (484)
..|...|....+.|++++|+..|++|++..|. ....|...+.. +...|++++|...|+++++.+|+++.+|...|..+
T Consensus 357 ~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~-~~~~~~~~a~~~~~~~~~~~~A~~~~e~al~~~p~~~~~~~~~~~~~ 435 (530)
T 2ooe_A 357 LVYIQYMKFARRAEGIKSGRMIFKKAREDART-RHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYL 435 (530)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTC-CTHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhccCC-chHHHHHHHHHHHHHcCChhHHHHHHHHHHHHCCCCHHHHHHHHHHH
Confidence 46677777777777888888888888887776 66666655544 34578888888888888888888888888888888
Q ss_pred HHcCCHHHHHHHHHHHHhcccc
Q 011519 458 FALGKENEAQAALREASILENK 479 (484)
Q Consensus 458 ~~~~~~~~A~~~~~~al~l~~~ 479 (484)
..+|++++|...|++|++..|.
T Consensus 436 ~~~g~~~~Ar~~~~~al~~~~~ 457 (530)
T 2ooe_A 436 SHLNEDNNTRVLFERVLTSGSL 457 (530)
T ss_dssp TTTTCHHHHHHHHHHHHHSCCS
T ss_pred HhCCCHhhHHHHHHHHHhccCC
Confidence 8888888888888888887543
|
| >1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2 | Back alignment and structure |
|---|
Probab=98.45 E-value=8.1e-07 Score=86.61 Aligned_cols=100 Identities=12% Similarity=0.031 Sum_probs=88.2
Q ss_pred HhhhhhHhHHHHHhccCHHHHHHHHHHHHhcC--------CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCC---
Q 011519 377 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVG--------TMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPV--- 445 (484)
Q Consensus 377 ~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~--------p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~--- 445 (484)
.+..+...|..+...|++++|+..|++++++. |. ...++.++|.++...|++++|+..+++++++.|.
T Consensus 92 ~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~ 170 (373)
T 1hz4_A 92 ALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPM-HEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQP 170 (373)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTH-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCG
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcH-HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCc
Confidence 34557789999999999999999999999875 22 3457889999999999999999999999999875
Q ss_pred --ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcc
Q 011519 446 --WHMAAYLQAAALFALGKENEAQAALREASILE 477 (484)
Q Consensus 446 --~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~ 477 (484)
...+++.+|.++...|++++|+..|++++++.
T Consensus 171 ~~~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~ 204 (373)
T 1hz4_A 171 QQQLQCLAMLIQCSLARGDLDNARSQLNRLENLL 204 (373)
T ss_dssp GGGHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 35789999999999999999999999999874
|
| >1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2 | Back alignment and structure |
|---|
Probab=98.45 E-value=3.8e-07 Score=88.98 Aligned_cols=102 Identities=16% Similarity=0.159 Sum_probs=88.2
Q ss_pred hhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCC-CH----HHHHHHHHHHHhcCCHHHHHHHHHHHHhcC--------C
Q 011519 378 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMV-SP----TAFARRSLSYLMSDMPQEALNDASQAQVIS--------P 444 (484)
Q Consensus 378 a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~-~~----~~~~~~a~~~~~~~~~~~A~~~~~~al~~~--------p 444 (484)
+..+...|..+...|++++|+..|++++++.|.. +. .++.++|.++..+|++++|+..+++++++. |
T Consensus 53 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~ 132 (373)
T 1hz4_A 53 IVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLP 132 (373)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTST
T ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCc
Confidence 4467788999999999999999999999886541 22 347899999999999999999999999875 4
Q ss_pred CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccc
Q 011519 445 VWHMAAYLQAAALFALGKENEAQAALREASILENK 479 (484)
Q Consensus 445 ~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 479 (484)
....++.++|.++..+|++++|+..|++++++.+.
T Consensus 133 ~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 167 (373)
T 1hz4_A 133 MHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSS 167 (373)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhc
Confidence 56778899999999999999999999999988653
|
| >3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.35 E-value=1.8e-06 Score=66.05 Aligned_cols=72 Identities=10% Similarity=-0.087 Sum_probs=64.1
Q ss_pred HHhhhhhHhHHHHHhccC---HHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChH
Q 011519 376 QETLNSKKKGDVAFRHKD---FRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHM 448 (484)
Q Consensus 376 ~~a~~~~~~g~~~~~~~~---~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~ 448 (484)
.++..+...|..++..++ .++|...+++|++++|+ ++.+++.+|..+++.|+|++|+..++++++.+|..+.
T Consensus 4 ~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~-~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~~~ 78 (93)
T 3bee_A 4 VTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPY-NEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPNLD 78 (93)
T ss_dssp CCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTTCC
T ss_pred CCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCcc
Confidence 456677888888875554 79999999999999999 9999999999999999999999999999999998433
|
| >2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A* | Back alignment and structure |
|---|
Probab=98.34 E-value=1.7e-06 Score=85.55 Aligned_cols=75 Identities=13% Similarity=0.047 Sum_probs=50.3
Q ss_pred cccCCCCCCceEEEEEeC-CCcEEEEEEecCCCC-------ccHHHHHHHHHHHhcCCC--C-ceeeeeeeeeeCCceEE
Q 011519 62 VSEHGEKAPNVVYKGKLE-NQFRIAVKRFNRSAW-------PDARQFLEEARAVGQLRN--R-RLANLLGCCCEGDERLL 130 (484)
Q Consensus 62 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~h--p-niv~l~~~~~~~~~~~l 130 (484)
++.+|.|.++.||+++.. +++.|+||....... ....++..|.++|+.+.. | .+.+++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 567899999999999843 567899998653211 123457789999887732 3 34455543 3456789
Q ss_pred EEecCCCC
Q 011519 131 VAEYMPND 138 (484)
Q Consensus 131 v~Ey~~~g 138 (484)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999774
|
| >2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A | Back alignment and structure |
|---|
Probab=98.34 E-value=2.4e-06 Score=66.97 Aligned_cols=70 Identities=9% Similarity=-0.144 Sum_probs=63.2
Q ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcC-------CCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 412 SPTAFARRSLSYLMSDMPQEALNDASQAQVIS-------PVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 412 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~-------p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
++.-.+.+|..++..|+|..|+..+++|++.. +..+..+..+|.+++.+|++++|+..+++|++++|.+.
T Consensus 4 sa~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~ 80 (104)
T 2v5f_A 4 TAEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQ 80 (104)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred CHHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCH
Confidence 45677899999999999999999999999863 45688999999999999999999999999999998753
|
| >3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.33 E-value=8.1e-07 Score=89.83 Aligned_cols=103 Identities=9% Similarity=-0.023 Sum_probs=88.6
Q ss_pred hHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhc-----CCC--CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcC---
Q 011519 374 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDV-----GTM--VSPTAFARRSLSYLMSDMPQEALNDASQAQVIS--- 443 (484)
Q Consensus 374 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~-----~p~--~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~--- 443 (484)
.+..+..+.+.|.++..+|+|++|+..|+++|++ .|+ .-...++|+|.+|..+|+|++|+..+.+|+++.
T Consensus 347 Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~ 426 (490)
T 3n71_A 347 NLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVT 426 (490)
T ss_dssp SHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Confidence 4677888999999999999999999999999965 344 033579999999999999999999999999653
Q ss_pred --CCC---hHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Q 011519 444 --PVW---HMAAYLQAAALFALGKENEAQAALREASIL 476 (484)
Q Consensus 444 --p~~---~~a~~~~g~~~~~~~~~~~A~~~~~~al~l 476 (484)
|++ .+.+.+++.++..++.|++|...|++|.+-
T Consensus 427 lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~~ 464 (490)
T 3n71_A 427 HGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMREA 464 (490)
T ss_dssp TCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444 577788999999999999999999998763
|
| >3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A* | Back alignment and structure |
|---|
Probab=98.32 E-value=1.9e-06 Score=79.22 Aligned_cols=89 Identities=12% Similarity=0.039 Sum_probs=80.0
Q ss_pred cCHHHHHHHHHHHHhcCCC-CCHHHHHHHHHHHHhc-----CCHHHHHHHHHHHHhcCCCC-hHHHHHHHHHHHH-cCCH
Q 011519 392 KDFRASIECYTQFIDVGTM-VSPTAFARRSLSYLMS-----DMPQEALNDASQAQVISPVW-HMAAYLQAAALFA-LGKE 463 (484)
Q Consensus 392 ~~~~~A~~~~~~ai~~~p~-~~~~~~~~~a~~~~~~-----~~~~~A~~~~~~al~~~p~~-~~a~~~~g~~~~~-~~~~ 463 (484)
+....|...+++||++||+ .+..+|.-+|..|... |+.++|...|++|++++|+. ..+++..|..++. +|++
T Consensus 177 ~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd~ 256 (301)
T 3u64_A 177 DTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNNR 256 (301)
T ss_dssp HHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTCH
T ss_pred HhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCCH
Confidence 4567899999999999999 2344899999999996 99999999999999999975 9999999999988 5999
Q ss_pred HHHHHHHHHHHhccccc
Q 011519 464 NEAQAALREASILENKK 480 (484)
Q Consensus 464 ~~A~~~~~~al~l~~~~ 480 (484)
++|.+.+++|++.+|..
T Consensus 257 ~~a~~~L~kAL~a~p~~ 273 (301)
T 3u64_A 257 AGFDEALDRALAIDPES 273 (301)
T ss_dssp HHHHHHHHHHHHCCGGG
T ss_pred HHHHHHHHHHHcCCCCC
Confidence 99999999999998763
|
| >1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=98.32 E-value=1.4e-06 Score=72.26 Aligned_cols=82 Identities=13% Similarity=0.002 Sum_probs=71.9
Q ss_pred HHhhhhhHhHHHHHhcc---CHHHHHHHHHHHHhcC-CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHH
Q 011519 376 QETLNSKKKGDVAFRHK---DFRASIECYTQFIDVG-TMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAY 451 (484)
Q Consensus 376 ~~a~~~~~~g~~~~~~~---~~~~A~~~~~~ai~~~-p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~ 451 (484)
.+....++.|..+.+.+ +++++|..+++.++.+ |....+++|++|..++++|+|++|+..++++|+++|++.+|..
T Consensus 30 ~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n~QA~~ 109 (152)
T 1pc2_A 30 VSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKE 109 (152)
T ss_dssp CCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred CcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHH
Confidence 35667788899999877 8889999999999999 7326889999999999999999999999999999999999987
Q ss_pred HHHHHH
Q 011519 452 LQAAAL 457 (484)
Q Consensus 452 ~~g~~~ 457 (484)
-+-.+-
T Consensus 110 Lk~~ie 115 (152)
T 1pc2_A 110 LERLID 115 (152)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 765544
|
| >2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.30 E-value=5.1e-06 Score=84.37 Aligned_cols=98 Identities=14% Similarity=0.024 Sum_probs=86.8
Q ss_pred HHhhhhhHhHHHHHhcc---CHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHh----cCCHHHHHHHHHHHHhcCCCChH
Q 011519 376 QETLNSKKKGDVAFRHK---DFRASIECYTQFIDVGTMVSPTAFARRSLSYLM----SDMPQEALNDASQAQVISPVWHM 448 (484)
Q Consensus 376 ~~a~~~~~~g~~~~~~~---~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~~~p~~~~ 448 (484)
.....+...|..+...| ++++|+..|++|++. . ++.+++++|.+|.. .+++++|+..+++|++. +++.
T Consensus 326 ~~~~a~~~lg~~y~~~g~~~~~~~A~~~~~~a~~~--~-~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~--~~~~ 400 (490)
T 2xm6_A 326 GDATAQANLGAIYFRLGSEEEHKKAVEWFRKAAAK--G-EKAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQ--GLSA 400 (490)
T ss_dssp TCHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHH
T ss_pred CCHHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHC--C-CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhC--CCHH
Confidence 34556778888887755 899999999999987 4 78899999999999 89999999999999986 4799
Q ss_pred HHHHHHHHHHH----cCCHHHHHHHHHHHHhccc
Q 011519 449 AAYLQAAALFA----LGKENEAQAALREASILEN 478 (484)
Q Consensus 449 a~~~~g~~~~~----~~~~~~A~~~~~~al~l~~ 478 (484)
+++++|.+|.. .+++++|+..|++|++++|
T Consensus 401 a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~ 434 (490)
T 2xm6_A 401 AQVQLGEIYYYGLGVERDYVQAWAWFDTASTNDM 434 (490)
T ss_dssp HHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCC
Confidence 99999999998 9999999999999999983
|
| >3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens} | Back alignment and structure |
|---|
Probab=98.30 E-value=3.6e-06 Score=84.71 Aligned_cols=97 Identities=9% Similarity=-0.007 Sum_probs=85.0
Q ss_pred HhhhhhHhHHHHHhcc---CHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhc----CCHHHHHHHHHHHHhcCCCChHH
Q 011519 377 ETLNSKKKGDVAFRHK---DFRASIECYTQFIDVGTMVSPTAFARRSLSYLMS----DMPQEALNDASQAQVISPVWHMA 449 (484)
Q Consensus 377 ~a~~~~~~g~~~~~~~---~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~----~~~~~A~~~~~~al~~~p~~~~a 449 (484)
+...+...|..+...| ++++|+..|+++++..|. .+..++++|.+|... +++++|+..++++. |+++.+
T Consensus 175 ~~~a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~-~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g~~~a 250 (452)
T 3e4b_A 175 TDICYVELATVYQKKQQPEQQAELLKQMEAGVSRGTV-TAQRVDSVARVLGDATLGTPDEKTAQALLEKIA---PGYPAS 250 (452)
T ss_dssp CTTHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCS-CHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG---GGSTHH
T ss_pred CHHHHHHHHHHHHHcCCcccHHHHHHHHHHHHHCCCH-HHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc---CCCHHH
Confidence 3447788899998888 999999999999999998 888889999998776 78999999999988 899999
Q ss_pred HHHHHHH-H--HHcCCHHHHHHHHHHHHhcc
Q 011519 450 AYLQAAA-L--FALGKENEAQAALREASILE 477 (484)
Q Consensus 450 ~~~~g~~-~--~~~~~~~~A~~~~~~al~l~ 477 (484)
++++|.+ + ...+++++|+..|++|++.+
T Consensus 251 ~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~g 281 (452)
T 3e4b_A 251 WVSLAQLLYDFPELGDVEQMMKYLDNGRAAD 281 (452)
T ss_dssp HHHHHHHHHHSGGGCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCCCCCHHHHHHHHHHHHHCC
Confidence 9999998 4 57899999999999998765
|
| >2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.29 E-value=3.9e-06 Score=80.91 Aligned_cols=138 Identities=10% Similarity=0.108 Sum_probs=78.9
Q ss_pred cccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCC--CCceeeeee------eeeeCCceEEEEe
Q 011519 62 VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR--NRRLANLLG------CCCEGDERLLVAE 133 (484)
Q Consensus 62 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--hpniv~l~~------~~~~~~~~~lv~E 133 (484)
+..++.|..+.||++...+| .+++|+.... ...+..|+.++..|. .-.+++++. +....+..++||+
T Consensus 37 ~~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~ 111 (346)
T 2q83_A 37 IDVIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYD 111 (346)
T ss_dssp EEECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEE
T ss_pred eeeccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEE
Confidence 34566678899999987665 5899998752 233445555555543 112333332 1234567899999
Q ss_pred cCCCCCHH-----------h---hhcc--CC---C-------CCCCHHHH------------------------------
Q 011519 134 YMPNDTLA-----------K---HLFH--WE---T-------QPMKWAMR------------------------------ 157 (484)
Q Consensus 134 y~~~gsL~-----------~---~l~~--~~---~-------~~l~~~~~------------------------------ 157 (484)
|++|.++. . .++. .. . ....|...
T Consensus 112 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 191 (346)
T 2q83_A 112 WIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQE 191 (346)
T ss_dssp CCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred eecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHH
Confidence 99986542 1 1111 00 0 01123211
Q ss_pred -HHHHHHHHHHHHHhhc------------CCCcccccccccceeecCCCCceeeccCCcc
Q 011519 158 -LRVALHIAEALEYCTS------------KERALYHDLNAYRIVFDDDVNPRLSCFGLMK 204 (484)
Q Consensus 158 -~~i~~qi~~~L~~lH~------------~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~ 204 (484)
..+..++..++.+|+. ...++|+|+++.|||++.++.+.|+||+.+.
T Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 192 IDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 0111123345556642 2479999999999999888899999998754
|
| >2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.20 E-value=1.7e-05 Score=80.40 Aligned_cols=95 Identities=8% Similarity=-0.096 Sum_probs=55.4
Q ss_pred HhhhhhHhHHHHHh----ccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHh----cCCHHHHHHHHHHHHhcCCCChH
Q 011519 377 ETLNSKKKGDVAFR----HKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLM----SDMPQEALNDASQAQVISPVWHM 448 (484)
Q Consensus 377 ~a~~~~~~g~~~~~----~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~~~p~~~~ 448 (484)
.+......|..+.. .+++++|+..|++|++. . ++.+++++|.+|.. .+++++|+..++++++. +++.
T Consensus 110 ~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~-~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~a~~~--~~~~ 184 (490)
T 2xm6_A 110 LPQAQQNLGVMYHEGNGVKVDKAESVKWFRLAAEQ--G-RDSGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQ--GNVW 184 (490)
T ss_dssp CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHH
T ss_pred CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--C-CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCHH
Confidence 34445555555555 55666666666666554 2 45566666666665 55666666666666554 3556
Q ss_pred HHHHHHHHHHH----cCCHHHHHHHHHHHHhc
Q 011519 449 AAYLQAAALFA----LGKENEAQAALREASIL 476 (484)
Q Consensus 449 a~~~~g~~~~~----~~~~~~A~~~~~~al~l 476 (484)
+++++|.+|.. .+++++|+..|++|++.
T Consensus 185 a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~ 216 (490)
T 2xm6_A 185 SCNQLGYMYSRGLGVERNDAISAQWYRKSATS 216 (490)
T ss_dssp HHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHC
Confidence 66666666655 56666666666665554
|
| >1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1 | Back alignment and structure |
|---|
Probab=98.15 E-value=8.6e-06 Score=67.38 Aligned_cols=80 Identities=16% Similarity=0.040 Sum_probs=72.3
Q ss_pred ccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHH----cCCHHHH
Q 011519 391 HKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFA----LGKENEA 466 (484)
Q Consensus 391 ~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~----~~~~~~A 466 (484)
.+++++|+..|++|.+.... .. . +|.+|...+.+++|+..+++|.+. +++.+++++|.+|.. .+++++|
T Consensus 8 ~~d~~~A~~~~~~aa~~g~~-~a--~--lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A 80 (138)
T 1klx_A 8 KKDLKKAIQYYVKACELNEM-FG--C--LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKA 80 (138)
T ss_dssp HHHHHHHHHHHHHHHHTTCT-TH--H--HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHH
T ss_pred ccCHHHHHHHHHHHHcCCCH-hh--h--HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHHH
Confidence 36789999999999998755 44 3 999999999999999999999987 789999999999999 9999999
Q ss_pred HHHHHHHHhcc
Q 011519 467 QAALREASILE 477 (484)
Q Consensus 467 ~~~~~~al~l~ 477 (484)
+..|++|.+.+
T Consensus 81 ~~~~~~Aa~~g 91 (138)
T 1klx_A 81 AQYYSKACGLN 91 (138)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHcCC
Confidence 99999999875
|
| >1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A | Back alignment and structure |
|---|
Probab=98.07 E-value=2e-05 Score=63.02 Aligned_cols=89 Identities=9% Similarity=0.022 Sum_probs=63.6
Q ss_pred cCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHH---HHHHHHHHHhcC-C-CChHHHHHHHHHHHHcCCHHHH
Q 011519 392 KDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQE---ALNDASQAQVIS-P-VWHMAAYLQAAALFALGKENEA 466 (484)
Q Consensus 392 ~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~---A~~~~~~al~~~-p-~~~~a~~~~g~~~~~~~~~~~A 466 (484)
.....+...|.+++..++. +..+-++.|.++.+..+..+ +|..++..++.+ | ..-+.+|.+|.+++.+|+|++|
T Consensus 15 ~~l~~~~~~y~~e~~~~~~-s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A 93 (126)
T 1nzn_A 15 EDLLKFEKKFQSEKAAGSV-SKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKA 93 (126)
T ss_dssp HHHHHHHHHHHHHHHHSCC-CHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHhccCCC-cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHH
Confidence 3445566667777666665 67777777777777766555 777777777766 4 5667777777778888888888
Q ss_pred HHHHHHHHhcccccc
Q 011519 467 QAALREASILENKKS 481 (484)
Q Consensus 467 ~~~~~~al~l~~~~~ 481 (484)
...++..|+++|.+.
T Consensus 94 ~~~~~~lL~~eP~n~ 108 (126)
T 1nzn_A 94 LKYVRGLLQTEPQNN 108 (126)
T ss_dssp HHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHhCCCCH
Confidence 877777777777653
|
| >3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX} | Back alignment and structure |
|---|
Probab=98.06 E-value=6e-06 Score=77.66 Aligned_cols=75 Identities=21% Similarity=0.240 Sum_probs=55.5
Q ss_pred ccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCC---ceeeeeeeeeeCCceEEEEecCCC
Q 011519 61 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNR---RLANLLGCCCEGDERLLVAEYMPN 137 (484)
Q Consensus 61 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hp---niv~l~~~~~~~~~~~lv~Ey~~~ 137 (484)
-+..+|.|..+.||+.+..+|+.|+||+...........|..|+..|+.|.-. -+++++++. ..++||||+++
T Consensus 19 ~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~l~~ 94 (288)
T 3f7w_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred EEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEeecc
Confidence 35678999999999999999999999987655434445688999998887421 344555442 34899999987
Q ss_pred CC
Q 011519 138 DT 139 (484)
Q Consensus 138 gs 139 (484)
+.
T Consensus 95 ~~ 96 (288)
T 3f7w_A 95 RP 96 (288)
T ss_dssp CC
T ss_pred cC
Confidence 64
|
| >3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens} | Back alignment and structure |
|---|
Probab=98.02 E-value=2.3e-05 Score=78.68 Aligned_cols=95 Identities=12% Similarity=-0.092 Sum_probs=64.2
Q ss_pred HHhhhhhHhHHH-H--HhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcC-----CHHHHHHHHHHHHhcCCCCh
Q 011519 376 QETLNSKKKGDV-A--FRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSD-----MPQEALNDASQAQVISPVWH 447 (484)
Q Consensus 376 ~~a~~~~~~g~~-~--~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~-----~~~~A~~~~~~al~~~p~~~ 447 (484)
..+..+...|.. + ...+++++|+..|++|++.+ ++.+++++|.+|. .| ++++|+..+.+|. |+++
T Consensus 246 g~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~g---~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa---~g~~ 318 (452)
T 3e4b_A 246 GYPASWVSLAQLLYDFPELGDVEQMMKYLDNGRAAD---QPRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV---GREV 318 (452)
T ss_dssp GSTHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT---TTCH
T ss_pred CCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh---CCCH
Confidence 445556666666 3 35677777777777777543 5667777777776 44 7777777777777 7777
Q ss_pred HHHHHHHHHHHH----cCCHHHHHHHHHHHHhcc
Q 011519 448 MAAYLQAAALFA----LGKENEAQAALREASILE 477 (484)
Q Consensus 448 ~a~~~~g~~~~~----~~~~~~A~~~~~~al~l~ 477 (484)
.+++++|.+|.. ..++++|+..|++|.+.+
T Consensus 319 ~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g 352 (452)
T 3e4b_A 319 AADYYLGQIYRRGYLGKVYPQKALDHLLTAARNG 352 (452)
T ss_dssp HHHHHHHHHHHTTTTSSCCHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHhhC
Confidence 777777776665 337777777777777654
|
| >3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT} | Back alignment and structure |
|---|
Probab=97.95 E-value=4e-05 Score=72.68 Aligned_cols=135 Identities=16% Similarity=0.108 Sum_probs=90.6
Q ss_pred cccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCC---CCceeeeeeeeeeCCceEEEEecCCCC
Q 011519 62 VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR---NRRLANLLGCCCEGDERLLVAEYMPND 138 (484)
Q Consensus 62 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---hpniv~l~~~~~~~~~~~lv~Ey~~~g 138 (484)
++.++.|.++.+|+... ++..++||+.... ....+..|+..|+.|. ...+++++.++...+..++||||++|.
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~ 116 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKS 116 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCC
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCC
Confidence 45679999999999986 4567889987532 3567889999988884 356888888887778899999999987
Q ss_pred CHH--------h---hhccCCC-C-------------------CCCHHHHH---HHH----------------HHHHHHH
Q 011519 139 TLA--------K---HLFHWET-Q-------------------PMKWAMRL---RVA----------------LHIAEAL 168 (484)
Q Consensus 139 sL~--------~---~l~~~~~-~-------------------~l~~~~~~---~i~----------------~qi~~~L 168 (484)
++. . .|+.... . .-+|.... ++. ..++..+
T Consensus 117 ~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l 196 (312)
T 3jr1_A 117 KNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIV 196 (312)
T ss_dssp CCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 642 1 1222111 0 01454322 111 1122222
Q ss_pred -HHhh--c-CCCcccccccccceeecCCCCceeeccC
Q 011519 169 -EYCT--S-KERALYHDLNAYRIVFDDDVNPRLSCFG 201 (484)
Q Consensus 169 -~~lH--~-~~~ivH~Dlkp~Nill~~~~~~kl~DfG 201 (484)
..|. . ...+||+|+.+.|++++.++ +.|.||.
T Consensus 197 ~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 197 ADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 2332 1 24789999999999999887 8899974
|
| >1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A | Back alignment and structure |
|---|
Probab=97.91 E-value=5.3e-05 Score=83.59 Aligned_cols=63 Identities=17% Similarity=0.082 Sum_probs=59.0
Q ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccc
Q 011519 412 SPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENK 479 (484)
Q Consensus 412 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 479 (484)
++.+|+++|.++...|++++|+..|.+| +++.+|++.|.++..+|+|++|++.|.+|.+.++.
T Consensus 1104 ~p~vWsqLAKAql~~G~~kEAIdsYiKA-----dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e 1166 (1630)
T 1xi4_A 1104 EPAVWSQLAKAQLQKGMVKEAIDSYIKA-----DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARE 1166 (1630)
T ss_pred CHHHHHHHHHHHHhCCCHHHHHHHHHhc-----CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhccc
Confidence 6789999999999999999999999886 89999999999999999999999999999988743
|
| >2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.91 E-value=5.4e-05 Score=75.22 Aligned_cols=74 Identities=16% Similarity=0.249 Sum_probs=45.3
Q ss_pred ccccCCCCCCceEEEEEeCCCcEEEEEEecC-----C-CCc---cHHHHHHHHHHHhc-CCCCceeeeeeeeeeCCceEE
Q 011519 61 IVSEHGEKAPNVVYKGKLENQFRIAVKRFNR-----S-AWP---DARQFLEEARAVGQ-LRNRRLANLLGCCCEGDERLL 130 (484)
Q Consensus 61 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~-----~-~~~---~~~~~~~E~~~l~~-l~hpniv~l~~~~~~~~~~~l 130 (484)
-++.+|.|..+.||++.. +++.++||.... . ... ....+..|+..+.. .....+++++.+. .+..++
T Consensus 38 ~i~~l~~G~~n~vyrv~~-~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~l 114 (420)
T 2pyw_A 38 VIKEVGDGNLNFVFIVVG-SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALI 114 (420)
T ss_dssp EEEECCCSSSCEEEEEEC-SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEE
T ss_pred EEEEccCCCcEEEEEEEc-CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEE
Confidence 356789999999999975 466899994221 0 101 22234444433321 1234566677665 567799
Q ss_pred EEecC-CC
Q 011519 131 VAEYM-PN 137 (484)
Q Consensus 131 v~Ey~-~~ 137 (484)
||||+ +|
T Consensus 115 v~e~l~~g 122 (420)
T 2pyw_A 115 GMRYLEPP 122 (420)
T ss_dssp EECCCCTT
T ss_pred EEeecCCc
Confidence 99999 77
|
| >2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=97.86 E-value=9.5e-05 Score=70.49 Aligned_cols=161 Identities=11% Similarity=0.117 Sum_probs=89.6
Q ss_pred ccccCHHHHHHHhcCCCccc--ccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCc--ee
Q 011519 41 FCEYSIETLRTATSGFAMEN--IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRR--LA 116 (484)
Q Consensus 41 ~~~~~~~~~~~~~~~f~~~~--~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpn--iv 116 (484)
+..++.+++......|.... -++.++.|....+|+....+| .+++|+..... ....+..|+.++..+...+ +.
T Consensus 4 ~~~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP 80 (322)
T 2ppq_A 4 YTDITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCP 80 (322)
T ss_dssp -CCCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCC
T ss_pred cccCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCC
Confidence 44567777777766564322 245677888899999987666 68899987531 2234556777776663211 33
Q ss_pred eeeee------eeeCCceEEEEecCCCCCHHh--------------hhccC----CCC---CC---CHHHHHH-------
Q 011519 117 NLLGC------CCEGDERLLVAEYMPNDTLAK--------------HLFHW----ETQ---PM---KWAMRLR------- 159 (484)
Q Consensus 117 ~l~~~------~~~~~~~~lv~Ey~~~gsL~~--------------~l~~~----~~~---~l---~~~~~~~------- 159 (484)
+++.. ....+..+++|+|++|.++.. .++.. ... .. .|...+.
T Consensus 81 ~~~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 160 (322)
T 2ppq_A 81 LPLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERAD 160 (322)
T ss_dssp CBCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGG
T ss_pred cccCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHH
Confidence 33321 123456789999999865321 01110 000 01 1222110
Q ss_pred -----HHHHHHHHHHHhhc------CCCcccccccccceeecCCCCceeeccCCcc
Q 011519 160 -----VALHIAEALEYCTS------KERALYHDLNAYRIVFDDDVNPRLSCFGLMK 204 (484)
Q Consensus 160 -----i~~qi~~~L~~lH~------~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~ 204 (484)
+...+...+..++. ..+++|+|+.+.|||+++++.+.|+||+.+.
T Consensus 161 ~~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 161 EVEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp GTSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 00113334444432 1368999999999999977666899998754
|
| >1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A | Back alignment and structure |
|---|
Probab=97.86 E-value=6.4e-05 Score=82.94 Aligned_cols=93 Identities=9% Similarity=0.014 Sum_probs=74.3
Q ss_pred HHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCC---------
Q 011519 375 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPV--------- 445 (484)
Q Consensus 375 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~--------- 445 (484)
......|.+.|.++.+.|++++|+.+|.+| + ++..|.+.|.++.++|+|++|++.+..|++.+++
T Consensus 1102 vn~p~vWsqLAKAql~~G~~kEAIdsYiKA-----d-D~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e~~Idt~Laf 1175 (1630)
T 1xi4_A 1102 CNEPAVWSQLAKAQLQKGMVKEAIDSYIKA-----D-DPSSYMEVVQAANTSGNWEELVKYLQMARKKARESYVETELIF 1175 (1630)
T ss_pred cCCHHHHHHHHHHHHhCCCHHHHHHHHHhc-----C-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcccccccHHHHH
Confidence 455678889999999999999999999887 5 7889999999999999999999999888866633
Q ss_pred ------------------ChHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 011519 446 ------------------WHMAAYLQAAALFALGKENEAQAALREA 473 (484)
Q Consensus 446 ------------------~~~a~~~~g~~~~~~~~~~~A~~~~~~a 473 (484)
+...++..|..+...|+|++|...|.+|
T Consensus 1176 aYAKl~rleele~fI~~~n~ad~~~iGd~le~eg~YeeA~~~Y~kA 1221 (1630)
T 1xi4_A 1176 ALAKTNRLAELEEFINGPNNAHIQQVGDRCYDEKMYDAAKLLYNNV 1221 (1630)
T ss_pred HHHhhcCHHHHHHHHhCCCHHHHHHHHHHHHhcCCHHHHHHHHHhh
Confidence 1234556666666666666666666654
|
| >3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.84 E-value=7.7e-05 Score=62.27 Aligned_cols=97 Identities=10% Similarity=-0.026 Sum_probs=76.8
Q ss_pred HHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCC---C-----CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcC---C
Q 011519 376 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTM---V-----SPTAFARRSLSYLMSDMPQEALNDASQAQVIS---P 444 (484)
Q Consensus 376 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~---~-----~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~---p 444 (484)
.....++.....++..+.|+.|+...+.++.+..+ . .+.++..+|.+++..++|..|...|.+||+.. +
T Consensus 18 ~~~~~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~ 97 (167)
T 3ffl_A 18 GSHMNVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALS 97 (167)
T ss_dssp ---CCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC-
T ss_pred ccHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHh
Confidence 45667888899999999999999999998766432 0 12378889999999999999999999986442 1
Q ss_pred ----------------------CChHHHHHHHHHHHHcCCHHHHHHHHHH
Q 011519 445 ----------------------VWHMAAYLQAAALFALGKENEAQAALRE 472 (484)
Q Consensus 445 ----------------------~~~~a~~~~g~~~~~~~~~~~A~~~~~~ 472 (484)
.+.+.-|..+.||..++++++|+..++.
T Consensus 98 k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~ 147 (167)
T 3ffl_A 98 KTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDG 147 (167)
T ss_dssp -------------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHT
T ss_pred cCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 1236789999999999999999998874
|
| >4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.83 E-value=2.3e-05 Score=77.66 Aligned_cols=98 Identities=6% Similarity=0.027 Sum_probs=73.0
Q ss_pred hhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCH-----------------HHHHHHHHHHHhcCCHHHHHHHHHHHHhc
Q 011519 380 NSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSP-----------------TAFARRSLSYLMSDMPQEALNDASQAQVI 442 (484)
Q Consensus 380 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~-----------------~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 442 (484)
....+|..+.+.|+|++|++.|.++++.+|. .. .++.++|.+|...|++++|++.+.+++++
T Consensus 6 ~~l~~a~~l~~~~~y~eA~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~ 84 (434)
T 4b4t_Q 6 SKLEEARRLVNEKQYNEAEQVYLSLLDKDSS-QSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEY 84 (434)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHSCCC-SSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhhCcc-cchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 3456777888888888888888888888776 22 25778888888888888888888888877
Q ss_pred CCCChHH------HHHHHHHHHHcCCHHHHHHHHHHHHhccc
Q 011519 443 SPVWHMA------AYLQAAALFALGKENEAQAALREASILEN 478 (484)
Q Consensus 443 ~p~~~~a------~~~~g~~~~~~~~~~~A~~~~~~al~l~~ 478 (484)
.+...++ +..+|.++...|++++|+..+++++....
T Consensus 85 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~ 126 (434)
T 4b4t_Q 85 MMQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAK 126 (434)
T ss_dssp HHTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 6655443 33456667777777788777777776643
|
| >1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=97.79 E-value=0.00035 Score=66.69 Aligned_cols=161 Identities=19% Similarity=0.144 Sum_probs=91.4
Q ss_pred ccccCHHHHHHHhcCCCcc--cccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCC--cee
Q 011519 41 FCEYSIETLRTATSGFAME--NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNR--RLA 116 (484)
Q Consensus 41 ~~~~~~~~~~~~~~~f~~~--~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hp--niv 116 (484)
+...+.+.+......+.-. .-+..++ |....||+....+|+.+++|+...... ....+..|+.++..+... .++
T Consensus 8 ~~~l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~-~~~~~~~E~~~~~~L~~~g~~vp 85 (328)
T 1zyl_A 8 FQTLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPERW-TADQILEEHQFALQLVNDEVPVA 85 (328)
T ss_dssp CCCCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTTS-CHHHHHHHHHHHHHHHHTTCSBC
T ss_pred CCCCCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCCC-CHHHHHHHHHHHHHHHHcCCeec
Confidence 4455666666554444221 1233456 788899998877777899999874322 345677788888777421 244
Q ss_pred eeeee-----eeeCCceEEEEecCCCCCHHh-----------h---hcc----CC---CCCCCHHHH-------------
Q 011519 117 NLLGC-----CCEGDERLLVAEYMPNDTLAK-----------H---LFH----WE---TQPMKWAMR------------- 157 (484)
Q Consensus 117 ~l~~~-----~~~~~~~~lv~Ey~~~gsL~~-----------~---l~~----~~---~~~l~~~~~------------- 157 (484)
+++.. ....+..++||++++|.++.. . ++. .. ....++...
T Consensus 86 ~~~~~~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 165 (328)
T 1zyl_A 86 APVAFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATL 165 (328)
T ss_dssp CCCCBTTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSS
T ss_pred ceeecCCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCc
Confidence 44443 123456688999998854321 1 110 00 011222111
Q ss_pred ---------HHHHHHHHHHHHHhh---cCCCcccccccccceeecCCCCceeeccCCccc
Q 011519 158 ---------LRVALHIAEALEYCT---SKERALYHDLNAYRIVFDDDVNPRLSCFGLMKN 205 (484)
Q Consensus 158 ---------~~i~~qi~~~L~~lH---~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 205 (484)
...+..++..+.-+. ....++|+|+++.|||++ + .+.|+||+.+..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 166 IPSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp SCTTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 111122222222221 112689999999999999 4 899999987644
|
| >2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A | Back alignment and structure |
|---|
Probab=97.78 E-value=7.9e-05 Score=65.42 Aligned_cols=141 Identities=12% Similarity=0.011 Sum_probs=92.7
Q ss_pred CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCCcccCCCC
Q 011519 138 DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLA 217 (484)
Q Consensus 138 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~t~~ 217 (484)
-||.++|.. .+.++++.++|.++.|.+.+|.-+-....-..+=+-|..|++..+|.|-..+ +.+ ......
T Consensus 33 vSL~eIL~~-~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s--------~~~~~~ 102 (229)
T 2yle_A 33 LSLEEILRL-YNQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLAP-AAD--------DAGEPP 102 (229)
T ss_dssp EEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEECC-C----------------
T ss_pred ccHHHHHHH-cCCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceeccc-ccc--------cccccC
Confidence 479998864 5678999999999999999997762210112223447889999999888774 111 112335
Q ss_pred CCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHHhcc--
Q 011519 218 FTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQY-- 295 (484)
Q Consensus 218 y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~-- 295 (484)
+.+||... ...+.+.=|||||+++|.-+--..|.. -+...++.|.+||..|...
T Consensus 103 ~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e~-----------------------eE~eLS~~LE~LL~~Mt~~~~ 158 (229)
T 2yle_A 103 PVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKEN-----------------------EERELSPPLEQLIDHMANTVE 158 (229)
T ss_dssp ----CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCTT-----------------------EEECCCHHHHHHHHHHTTCCC
T ss_pred CCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCcc-----------------------cchhhCHHHHHHHHHHHhccc
Confidence 77888764 345667789999999999987654321 1223456788888888766
Q ss_pred -----------------------CCCCCCChHHHHHHHHh
Q 011519 296 -----------------------EPRERPNPRSLVTALVT 312 (484)
Q Consensus 296 -----------------------dp~~Rps~~~il~~l~~ 312 (484)
.+..|+++++|++.-..
T Consensus 159 d~~~~DeG~~~~~eg~~d~~~~~~~~~~~sl~~Vi~~C~~ 198 (229)
T 2yle_A 159 ADGSNDEGYEAAEEGLGDEDEKRKISAIRSYRDVMKLCAA 198 (229)
T ss_dssp --------------------CCSCCCCCCSHHHHHHHHHT
T ss_pred ccccccccccccccccccccccccccCcCCHHHHHHHHHh
Confidence 34678899998877554
|
| >4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.77 E-value=7.3e-05 Score=74.04 Aligned_cols=100 Identities=10% Similarity=0.020 Sum_probs=84.4
Q ss_pred hhhhHhHHHHHhccCHHHHHHHHHHHHhcCCC-----CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhc------CCCCh
Q 011519 379 LNSKKKGDVAFRHKDFRASIECYTQFIDVGTM-----VSPTAFARRSLSYLMSDMPQEALNDASQAQVI------SPVWH 447 (484)
Q Consensus 379 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~-----~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~------~p~~~ 447 (484)
......|..+...|++++|+..+++++...+. ....++.++|.+|..+|+|++|+..+.+++.. .|..+
T Consensus 96 ~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~ 175 (434)
T 4b4t_Q 96 VLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLV 175 (434)
T ss_dssp HHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHH
T ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHH
Confidence 34445566777889999999999999976332 13668999999999999999999999999866 45567
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhccc
Q 011519 448 MAAYLQAAALFALGKENEAQAALREASILEN 478 (484)
Q Consensus 448 ~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~ 478 (484)
.++...|.+|..+|++++|...|++|+.+.+
T Consensus 176 ~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~ 206 (434)
T 4b4t_Q 176 DVHLLESKVYHKLRNLAKSKASLTAARTAAN 206 (434)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHHHhh
Confidence 8999999999999999999999999998764
|
| >3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP} | Back alignment and structure |
|---|
Probab=97.73 E-value=0.00014 Score=69.77 Aligned_cols=139 Identities=8% Similarity=-0.035 Sum_probs=71.5
Q ss_pred cccCCCCCCce-EEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCC-C-CceeeeeeeeeeCCceEEEEecCCCC
Q 011519 62 VSEHGEKAPNV-VYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-N-RRLANLLGCCCEGDERLLVAEYMPND 138 (484)
Q Consensus 62 ~~~lG~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h-pniv~l~~~~~~~~~~~lv~Ey~~~g 138 (484)
+..++.|+... +|+....+++.+++|....... ..+..|+.++..+. + -.+.+++.+... ..++|||++.+.
T Consensus 23 ~~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~--~g~ll~e~l~~~ 97 (333)
T 3csv_A 23 RTPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHA--RGLLLIEDLGDA 97 (333)
T ss_dssp ECC--------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETT--TTEEEECCCCSC
T ss_pred eeECCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCC--CCEEEEeeCCCc
Confidence 34555554444 6777764466787876543321 22345566665553 2 235556655332 338999999876
Q ss_pred CHHhhhccC---------------------CC---CCCCHHHHH-------HHH-------------HHHHHHHHHh---
Q 011519 139 TLAKHLFHW---------------------ET---QPMKWAMRL-------RVA-------------LHIAEALEYC--- 171 (484)
Q Consensus 139 sL~~~l~~~---------------------~~---~~l~~~~~~-------~i~-------------~qi~~~L~~l--- 171 (484)
++.+++... .. ..++..... .+. ..+...+..+
T Consensus 98 ~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~ 177 (333)
T 3csv_A 98 LFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSA 177 (333)
T ss_dssp BHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred chHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHh
Confidence 765443210 00 112221100 000 0111112222
Q ss_pred ---hcCCCcccccccccceeecCC----CCceeeccCCcccc
Q 011519 172 ---TSKERALYHDLNAYRIVFDDD----VNPRLSCFGLMKNS 206 (484)
Q Consensus 172 ---H~~~~ivH~Dlkp~Nill~~~----~~~kl~DfG~a~~~ 206 (484)
+. ..++|+|+.+.|||++.+ +.+.|+||+.+...
T Consensus 178 ~~~~~-~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 178 QLEGD-MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp HCCSC-CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred cccCC-CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 22 378999999999999874 67899999987653
|
| >3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B | Back alignment and structure |
|---|
Probab=97.73 E-value=0.00018 Score=67.54 Aligned_cols=101 Identities=8% Similarity=-0.072 Sum_probs=66.1
Q ss_pred HHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCC-----CCCHHHHHHHHHHHHhcC--CHHHHHHHHHHHHhcCCC--C
Q 011519 376 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGT-----MVSPTAFARRSLSYLMSD--MPQEALNDASQAQVISPV--W 446 (484)
Q Consensus 376 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p-----~~~~~~~~~~a~~~~~~~--~~~~A~~~~~~al~~~p~--~ 446 (484)
.........+..+.+.|+.+.|...+++..+.+| +....+...-|.+.+..| ++++|+..|+++.+..|+ .
T Consensus 134 ~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~~~p~~~~ 213 (310)
T 3mv2_B 134 GTTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNEMILNLAESYIKFATNKETATSNFYYYEELSQTFPTWKT 213 (310)
T ss_dssp THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHTTSCSHHH
T ss_pred CcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccccccchHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhCCCccc
Confidence 4555556666777777778888777777777777 202223333343355555 777788878877777776 3
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccc
Q 011519 447 HMAAYLQAAALFALGKENEAQAALREASILENK 479 (484)
Q Consensus 447 ~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 479 (484)
...+++ ++.++|++++|.+.+++++++.|+
T Consensus 214 ~~lLln---~~~~~g~~~eAe~~L~~l~~~~p~ 243 (310)
T 3mv2_B 214 QLGLLN---LHLQQRNIAEAQGIVELLLSDYYS 243 (310)
T ss_dssp HHHHHH---HHHHHTCHHHHHHHHHHHHSHHHH
T ss_pred HHHHHH---HHHHcCCHHHHHHHHHHHHHhccc
Confidence 344444 778888888888888877777654
|
| >1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3 | Back alignment and structure |
|---|
Probab=97.67 E-value=0.0001 Score=72.51 Aligned_cols=93 Identities=12% Similarity=-0.018 Sum_probs=72.3
Q ss_pred HHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHH
Q 011519 376 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAA 455 (484)
Q Consensus 376 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 455 (484)
..+..+...|..+.+.|+|++|++.|.+| . ++..|...+.+...+|+++.|...... |..+|++ ...+..
T Consensus 146 ~~a~n~~~LA~~L~~Lg~yq~AVea~~KA-----~-~~~~Wk~v~~aCv~~~ef~lA~~~~l~-L~~~ad~---l~~lv~ 215 (449)
T 1b89_A 146 NNVSNFGRLASTLVHLGEYQAAVDGARKA-----N-STRTWKEVCFACVDGKEFRLAQMCGLH-IVVHADE---LEELIN 215 (449)
T ss_dssp HHTTCHHHHHHHHHTTTCHHHHHHHHHHH-----T-CHHHHHHHHHHHHHTTCHHHHHHTTTT-TTTCHHH---HHHHHH
T ss_pred HHhhhHHHHHHHHHHhccHHHHHHHHHHc-----C-CchhHHHHHHHHHHcCcHHHHHHHHHH-HHhCHhh---HHHHHH
Confidence 45568888999999999999999999999 4 577888888888888888888654443 4455544 335677
Q ss_pred HHHHcCCHHHHHHHHHHHHhccc
Q 011519 456 ALFALGKENEAQAALREASILEN 478 (484)
Q Consensus 456 ~~~~~~~~~~A~~~~~~al~l~~ 478 (484)
.|...|++++|+..|++++.+|+
T Consensus 216 ~Yek~G~~eEai~lLe~aL~le~ 238 (449)
T 1b89_A 216 YYQDRGYFEELITMLEAALGLER 238 (449)
T ss_dssp HHHHTTCHHHHHHHHHHHTTSTT
T ss_pred HHHHCCCHHHHHHHHHHHhCCcH
Confidence 78888888888888888888874
|
| >3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B | Back alignment and structure |
|---|
Probab=97.61 E-value=0.00022 Score=66.96 Aligned_cols=101 Identities=11% Similarity=-0.118 Sum_probs=85.6
Q ss_pred hhhhhHhHHHHHhccCHHHHHHHHHHHHhcCC--CCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCC----ChHHHH
Q 011519 378 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGT--MVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPV----WHMAAY 451 (484)
Q Consensus 378 a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p--~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~----~~~a~~ 451 (484)
...+...|..+...|++++|++.+.+.|..+| . +..++...+.+++++|+.+.|.+.+.+..+.+|+ +-....
T Consensus 100 ~~~~~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~-~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~ 178 (310)
T 3mv2_B 100 PYELYLLATAQAILGDLDKSLETCVEGIDNDEAEG-TTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNEMIL 178 (310)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHTSSCSTT-HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCcC-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccccccchHHHH
Confidence 34456889999999999999999999999997 9 8999999999999999999999999999999993 233334
Q ss_pred HH--HHHHHHcC--CHHHHHHHHHHHHhcccc
Q 011519 452 LQ--AAALFALG--KENEAQAALREASILENK 479 (484)
Q Consensus 452 ~~--g~~~~~~~--~~~~A~~~~~~al~l~~~ 479 (484)
.+ |.+.+..| ++.+|...|+++.+..|+
T Consensus 179 ~Laea~v~l~~g~~~~q~A~~~f~El~~~~p~ 210 (310)
T 3mv2_B 179 NLAESYIKFATNKETATSNFYYYEELSQTFPT 210 (310)
T ss_dssp HHHHHHHHHHHTCSTTTHHHHHHHHHHTTSCS
T ss_pred HHHHHHHHHHhCCccHHHHHHHHHHHHHhCCC
Confidence 44 54466667 999999999998877664
|
| >3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00012 Score=69.20 Aligned_cols=71 Identities=14% Similarity=0.132 Sum_probs=44.2
Q ss_pred cccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCce-eeeeeeeeeCCceEEEEecC-CCCC
Q 011519 62 VSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRL-ANLLGCCCEGDERLLVAEYM-PNDT 139 (484)
Q Consensus 62 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpni-v~l~~~~~~~~~~~lv~Ey~-~~gs 139 (484)
+..|+.|..+.+|+. ..+++|+....... .....+|+.+++.+...++ .+++++. .+..++|+||+ +|.+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~~g~~ 94 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIAGAQT 94 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCTTCEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecCCCcc
Confidence 566788999999999 46889988653211 1123467777777642222 4555543 33458999999 6654
Q ss_pred H
Q 011519 140 L 140 (484)
Q Consensus 140 L 140 (484)
|
T Consensus 95 l 95 (301)
T 3dxq_A 95 M 95 (301)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A* | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00042 Score=63.71 Aligned_cols=79 Identities=11% Similarity=0.035 Sum_probs=62.9
Q ss_pred HHHHH-hcCCCCCHHHHHHHHHHHHh---c--------CCHHHHHHHHHHHHhcCCC--ChHHHHHHHHHHHHc-----C
Q 011519 401 YTQFI-DVGTMVSPTAFARRSLSYLM---S--------DMPQEALNDASQAQVISPV--WHMAAYLQAAALFAL-----G 461 (484)
Q Consensus 401 ~~~ai-~~~p~~~~~~~~~~a~~~~~---~--------~~~~~A~~~~~~al~~~p~--~~~a~~~~g~~~~~~-----~ 461 (484)
+.+++ +.+|+ +..+++..|.+... + +...+|...+++|+++||+ +..+|..+|..|.+. |
T Consensus 140 ~~~~l~~~~~~-dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gG 218 (301)
T 3u64_A 140 LHKVLSRCTRV-DVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGG 218 (301)
T ss_dssp HHHHHTTCCGG-GHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTC
T ss_pred HHHHHHHcCcc-ccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCC
Confidence 44555 45666 77777767665543 2 2356799999999999999 566999999999996 9
Q ss_pred CHHHHHHHHHHHHhccccc
Q 011519 462 KENEAQAALREASILENKK 480 (484)
Q Consensus 462 ~~~~A~~~~~~al~l~~~~ 480 (484)
+.++|.+.|++|++++|..
T Consensus 219 d~ekA~~~ferAL~LnP~~ 237 (301)
T 3u64_A 219 GMEKAHTAFEHLTRYCSAH 237 (301)
T ss_dssp CHHHHHHHHHHHHHHCCTT
T ss_pred CHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999853
|
| >1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8 | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00029 Score=70.02 Aligned_cols=73 Identities=15% Similarity=0.255 Sum_probs=50.2
Q ss_pred cccCCCCCCceEEEEEeCC--------CcEEEEEEecCCCCccHHHHHHHHHHHhcCC-CCceeeeeeeeeeCCceEEEE
Q 011519 62 VSEHGEKAPNVVYKGKLEN--------QFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVA 132 (484)
Q Consensus 62 ~~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~lv~ 132 (484)
+..|+.|....||++...+ +..+++|+..... ....+..|..++..+. +.-.+++++.+.. .+|+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~--~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~ 151 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE--TESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE 151 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC--CHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC--cHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEE
Confidence 4567888889999998653 5789999984321 2245668999988884 3333566666542 4899
Q ss_pred ecCCCCCH
Q 011519 133 EYMPNDTL 140 (484)
Q Consensus 133 Ey~~~gsL 140 (484)
||++|.+|
T Consensus 152 e~l~G~~l 159 (429)
T 1nw1_A 152 EYIPSRPL 159 (429)
T ss_dssp CCCCEEEC
T ss_pred EEeCCccc
Confidence 99987444
|
| >3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00021 Score=68.43 Aligned_cols=75 Identities=17% Similarity=0.074 Sum_probs=65.2
Q ss_pred HHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHH
Q 011519 375 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYL 452 (484)
Q Consensus 375 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~ 452 (484)
...+..+...+..++-.|++++|+..+++|+.++|+ ..+|..+|.++...|++++|++.+++|+.++|...- |+.
T Consensus 274 ~~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s--~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~t-~~~ 348 (372)
T 3ly7_A 274 NNLSIIYQIKAVSALVKGKTDESYQAINTGIDLEMS--WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGANT-LYW 348 (372)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC--HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHHH-HHH
T ss_pred CcCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCC--HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcCh-HHH
Confidence 455666777777888889999999999999999976 678899999999999999999999999999998864 443
|
| >3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A* | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00026 Score=68.96 Aligned_cols=138 Identities=14% Similarity=0.154 Sum_probs=83.1
Q ss_pred cccCCCCCCceEEEEEeC--------CCcEEEEEEecCCCCccHHHHHHHHHHHhcCC-CCceeeeeeeeeeCCceEEEE
Q 011519 62 VSEHGEKAPNVVYKGKLE--------NQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVA 132 (484)
Q Consensus 62 ~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~lv~ 132 (484)
+..+..|-...+|++... +++.+++|+.... ......+.+|..+++.|. +.-..++++.+.. .+||
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~ 129 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLE 129 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEE
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEE
Confidence 345677888999999864 2478999986432 223456678999998884 3334666666543 3999
Q ss_pred ecCCCCCHHhh--------------h---ccCC---CCCCC--HHHHHHHHHHHHH-------------------HHHHh
Q 011519 133 EYMPNDTLAKH--------------L---FHWE---TQPMK--WAMRLRVALHIAE-------------------ALEYC 171 (484)
Q Consensus 133 Ey~~~gsL~~~--------------l---~~~~---~~~l~--~~~~~~i~~qi~~-------------------~L~~l 171 (484)
||++|.+|..- | +... ++... +.++.++..++-. .+..|
T Consensus 130 e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L 209 (379)
T 3feg_A 130 QYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNL 209 (379)
T ss_dssp ECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHH
T ss_pred EEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHH
Confidence 99998665321 1 1100 11222 4566666654422 12222
Q ss_pred ----hc---CCCcccccccccceeecCC----CCceeeccCCcc
Q 011519 172 ----TS---KERALYHDLNAYRIVFDDD----VNPRLSCFGLMK 204 (484)
Q Consensus 172 ----H~---~~~ivH~Dlkp~Nill~~~----~~~kl~DfG~a~ 204 (484)
.. ...++|+|+.+.|||++.+ +.+.|+||..+.
T Consensus 210 ~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 210 RKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 21 1358999999999999876 789999997654
|
| >3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00017 Score=71.55 Aligned_cols=70 Identities=9% Similarity=0.042 Sum_probs=60.6
Q ss_pred hHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhc-----CCC--CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcC
Q 011519 374 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDV-----GTM--VSPTAFARRSLSYLMSDMPQEALNDASQAQVIS 443 (484)
Q Consensus 374 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~-----~p~--~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~ 443 (484)
.+..+..+.+.|.++..+|+|++|+..|+++|++ .|+ .-...++|+|.+|..+|+|++|+..+++|+++.
T Consensus 336 Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~ 412 (433)
T 3qww_A 336 NVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLYMGLENKAAGEKALKKAIAIM 412 (433)
T ss_dssp SHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHH
Confidence 4677888999999999999999999999999964 333 033479999999999999999999999999764
|
| >1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00047 Score=55.01 Aligned_cols=81 Identities=10% Similarity=-0.062 Sum_probs=67.0
Q ss_pred HhhhhhHhHHHHHhccCHHH---HHHHHHHHHhcC-CCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHH
Q 011519 377 ETLNSKKKGDVAFRHKDFRA---SIECYTQFIDVG-TMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYL 452 (484)
Q Consensus 377 ~a~~~~~~g~~~~~~~~~~~---A~~~~~~ai~~~-p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~ 452 (484)
.....++.|..+.+.++-.+ +|..++..++.+ |...-+..+.+|..++++|+|++|+..++..|+++|+|.+|.--
T Consensus 34 s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA~~L 113 (126)
T 1nzn_A 34 SKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKEL 113 (126)
T ss_dssp CHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 34556677888877776666 999999999987 52266789999999999999999999999999999999999776
Q ss_pred HHHHH
Q 011519 453 QAAAL 457 (484)
Q Consensus 453 ~g~~~ 457 (484)
+..+-
T Consensus 114 k~~i~ 118 (126)
T 1nzn_A 114 ERLID 118 (126)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65543
|
| >3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00017 Score=71.70 Aligned_cols=86 Identities=10% Similarity=-0.035 Sum_probs=69.4
Q ss_pred hHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhc-----CCCCCH---HHHHHHHHHHHhcCCHHHHHHHHHHHHhcC--
Q 011519 374 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDV-----GTMVSP---TAFARRSLSYLMSDMPQEALNDASQAQVIS-- 443 (484)
Q Consensus 374 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~-----~p~~~~---~~~~~~a~~~~~~~~~~~A~~~~~~al~~~-- 443 (484)
.+..+..+.+.|.++..+|+|++|+..|.++|++ .|. .+ ..++|+|.+|..+|+|++|+..+.+|+++-
T Consensus 325 h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~-Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~ 403 (429)
T 3qwp_A 325 NIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGS-HPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRV 403 (429)
T ss_dssp SHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSS-CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCC-ChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence 4677888999999999999999999999999964 333 33 479999999999999999999999999653
Q ss_pred ---CCC---hHHHHHHHHHHHHc
Q 011519 444 ---PVW---HMAAYLQAAALFAL 460 (484)
Q Consensus 444 ---p~~---~~a~~~~g~~~~~~ 460 (484)
|++ .+.+.+++.++..+
T Consensus 404 ~lG~~Hp~~~~~~~~l~~~~~e~ 426 (429)
T 3qwp_A 404 THGREHSLIEDLILLLEECDANI 426 (429)
T ss_dssp HTCTTSHHHHHHHHHHHHHHHHH
T ss_pred hcCCCChHHHHHHHHHHHHHHHH
Confidence 554 45556666666543
|
| >1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3 | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00015 Score=71.20 Aligned_cols=87 Identities=16% Similarity=0.083 Sum_probs=63.1
Q ss_pred hhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHH
Q 011519 379 LNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALF 458 (484)
Q Consensus 379 ~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~ 458 (484)
..+...|..++..|+|++|+..|+++ ..|.++|.|+.++|+|++|++.+.+| ++++.|...+.++.
T Consensus 123 ~a~~~IGd~~~~~g~yeeA~~~Y~~a---------~n~~~LA~~L~~Lg~yq~AVea~~KA-----~~~~~Wk~v~~aCv 188 (449)
T 1b89_A 123 AHIQQVGDRCYDEKMYDAAKLLYNNV---------SNFGRLASTLVHLGEYQAAVDGARKA-----NSTRTWKEVCFACV 188 (449)
T ss_dssp --------------CTTTHHHHHHHT---------TCHHHHHHHHHTTTCHHHHHHHHHHH-----TCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHh---------hhHHHHHHHHHHhccHHHHHHHHHHc-----CCchhHHHHHHHHH
Confidence 48999999999999999999999987 26889999999999999999999999 57899999999999
Q ss_pred HcCCHHHHHHHHHHHHhccccc
Q 011519 459 ALGKENEAQAALREASILENKK 480 (484)
Q Consensus 459 ~~~~~~~A~~~~~~al~l~~~~ 480 (484)
.+|+++.|...... +.+.|++
T Consensus 189 ~~~ef~lA~~~~l~-L~~~ad~ 209 (449)
T 1b89_A 189 DGKEFRLAQMCGLH-IVVHADE 209 (449)
T ss_dssp HTTCHHHHHHTTTT-TTTCHHH
T ss_pred HcCcHHHHHHHHHH-HHhCHhh
Confidence 99999999766553 3344443
|
| >3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A | Back alignment and structure |
|---|
Probab=97.28 E-value=0.0015 Score=52.27 Aligned_cols=80 Identities=6% Similarity=-0.123 Sum_probs=60.5
Q ss_pred hhhhhHhHHHHHhcc---CHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHH
Q 011519 378 TLNSKKKGDVAFRHK---DFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQA 454 (484)
Q Consensus 378 a~~~~~~g~~~~~~~---~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 454 (484)
....++.|..+.+.+ +..++|..++..++.+|...-+.++.+|..+.++|+|++|...++..++++|+|.+|.--+.
T Consensus 40 ~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk~ 119 (134)
T 3o48_A 40 IQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKS 119 (134)
T ss_dssp HHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHHH
T ss_pred hhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHHH
Confidence 445566666666554 45578888888888887525678888888889999999999999988999998888876665
Q ss_pred HHH
Q 011519 455 AAL 457 (484)
Q Consensus 455 ~~~ 457 (484)
.+-
T Consensus 120 ~Ie 122 (134)
T 3o48_A 120 MVE 122 (134)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
|
| >3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A* | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00056 Score=66.55 Aligned_cols=74 Identities=14% Similarity=0.213 Sum_probs=44.6
Q ss_pred cccCCCCCCceEEEEEeCC---------CcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCc-eeeeeeeeeeCCceEEE
Q 011519 62 VSEHGEKAPNVVYKGKLEN---------QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRR-LANLLGCCCEGDERLLV 131 (484)
Q Consensus 62 ~~~lG~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpn-iv~l~~~~~~~~~~~lv 131 (484)
+..++.|....+|++...+ +..+++|+..... ........|..+++.+...+ +.++++.. . .++|
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~-~~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v 112 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHV-DELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRI 112 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTG-GGTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEE
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCc-cceecHHHHHHHHHHHHhcCCCCceEEec--C--CcEE
Confidence 4567888889999998654 2678888875432 11112357788887774223 44666544 2 3789
Q ss_pred EecCCCCCH
Q 011519 132 AEYMPNDTL 140 (484)
Q Consensus 132 ~Ey~~~gsL 140 (484)
|||++|.++
T Consensus 113 ~e~i~G~~l 121 (369)
T 3c5i_A 113 EEWLYGDPL 121 (369)
T ss_dssp EECCCSEEC
T ss_pred EEEecCCcC
Confidence 999988543
|
| >3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A* | Back alignment and structure |
|---|
Probab=97.22 E-value=0.0029 Score=60.63 Aligned_cols=68 Identities=7% Similarity=-0.000 Sum_probs=43.6
Q ss_pred CCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCC---CCceeeeeee------eeeCCceEEEEecCC
Q 011519 66 GEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR---NRRLANLLGC------CCEGDERLLVAEYMP 136 (484)
Q Consensus 66 G~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---hpniv~l~~~------~~~~~~~~lv~Ey~~ 136 (484)
|.|....||+....+| .+++|+...... ..|+.++..|. -|++++.+.. ....+..++||+|++
T Consensus 32 G~g~~N~vy~v~~~~g-~~vLK~~~~~~~------~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~ 104 (339)
T 3i1a_A 32 GADTNAFAYQADSESK-SYFIKLKYGYHD------EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIH 104 (339)
T ss_dssp TSCSSCEEEEEECSSC-EEEEEEEECSSC------CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCC
T ss_pred cCccccceEEEEeCCC-CEEEEEecCccc------hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccC
Confidence 4555789999997777 899998765432 24455554442 1224444432 233567899999999
Q ss_pred CCCH
Q 011519 137 NDTL 140 (484)
Q Consensus 137 ~gsL 140 (484)
|..+
T Consensus 105 G~~~ 108 (339)
T 3i1a_A 105 APNG 108 (339)
T ss_dssp CCBT
T ss_pred CCcC
Confidence 8765
|
| >2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax} | Back alignment and structure |
|---|
Probab=97.12 E-value=0.0013 Score=65.69 Aligned_cols=73 Identities=14% Similarity=0.101 Sum_probs=46.9
Q ss_pred ccCCCCCCceEEEEEeCC-CcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCce-eeeeeeeeeCCceEEEEecCCCCCH
Q 011519 63 SEHGEKAPNVVYKGKLEN-QFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRL-ANLLGCCCEGDERLLVAEYMPNDTL 140 (484)
Q Consensus 63 ~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpni-v~l~~~~~~~~~~~lv~Ey~~~gsL 140 (484)
..|+.|-...+|++...+ +..+++|+...... ..-...+|..++..|...++ .++++.+. + .+||||++|.+|
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~-~~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~l 188 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTD-EIINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYAL 188 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CC-SCSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEEC
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChh-hhcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCccC
Confidence 456778889999999765 57888998754321 11112578888888864433 56777663 2 369999988554
|
| >1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1 | Back alignment and structure |
|---|
Probab=97.07 E-value=0.0046 Score=50.13 Aligned_cols=80 Identities=5% Similarity=-0.114 Sum_probs=0.0
Q ss_pred HhhhhhHhHHHHHhccCHH---HHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHH
Q 011519 377 ETLNSKKKGDVAFRHKDFR---ASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQ 453 (484)
Q Consensus 377 ~a~~~~~~g~~~~~~~~~~---~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 453 (484)
.....++.+..+.+..+-. ++|..++..++..|...-+..+.+|..++++|+|++|...++..|+++|+|.+|.--+
T Consensus 38 s~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk 117 (144)
T 1y8m_A 38 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALK 117 (144)
T ss_dssp CHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHHH
T ss_pred cHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHHH
Q ss_pred HHH
Q 011519 454 AAA 456 (484)
Q Consensus 454 g~~ 456 (484)
..+
T Consensus 118 ~~I 120 (144)
T 1y8m_A 118 SMV 120 (144)
T ss_dssp HHH
T ss_pred HHH
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 484 | ||||
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 6e-42 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 3e-41 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 2e-40 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 5e-39 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 8e-39 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 3e-38 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 3e-38 | |
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 3e-37 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 6e-36 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 1e-35 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 2e-35 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 7e-35 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 7e-35 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 2e-34 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 2e-34 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 3e-34 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 1e-33 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 4e-33 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 6e-33 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 9e-33 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 6e-32 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 7e-32 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 9e-32 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 1e-31 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 5e-31 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 5e-31 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 1e-30 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 1e-30 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 3e-30 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 3e-30 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 5e-29 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 2e-28 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 4e-28 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 1e-27 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 2e-27 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 1e-26 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 4e-26 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 4e-26 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 2e-25 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 2e-25 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 2e-25 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 7e-25 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 9e-24 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 2e-23 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 3e-23 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 7e-23 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 9e-23 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 1e-22 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 4e-22 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 7e-22 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 5e-21 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 8e-21 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 2e-20 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 2e-19 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 3e-19 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 3e-18 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 7e-18 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 4e-16 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 5e-15 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 4e-14 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 5e-14 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 9e-14 | |
| d1zara2 | 191 | d.144.1.9 (A:91-281) Rio2 serine protein kinase C- | 1e-06 | |
| d2c2la1 | 201 | a.118.8.1 (A:24-224) STIP1 homology and U box-cont | 5e-06 | |
| d1w3ba_ | 388 | a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, | 7e-04 | |
| d1elra_ | 128 | a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9 | 0.002 |
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 147 bits (373), Expect = 6e-42
Identities = 56/245 (22%), Positives = 106/245 (43%), Gaps = 12/245 (4%)
Query: 72 VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
VV GK Q+ +A+K + + +F+EEA+ + L + +L L G C + ++
Sbjct: 19 VVKYGKWRGQYDVAIKMIKEGSMSE-DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFII 77
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
EYM N L +L + L + + EA+EY SK + L+ DL A + +D
Sbjct: 78 TEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLESK-QFLHRDLAARNCLVND 135
Query: 192 DVNPRLSCFGLMKNSRDGRSYSTN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLL 246
++S FGL + D S+ + ++PPE L + + +S +++FG L+ ++
Sbjct: 136 QGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIY 195
Query: 247 SGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSL 306
S +P + L ++ + C + ERP + L
Sbjct: 196 SLGKMPYER----FTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKIL 251
Query: 307 VTALV 311
++ ++
Sbjct: 252 LSNIL 256
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 146 bits (369), Expect = 3e-41
Identities = 52/249 (20%), Positives = 105/249 (42%), Gaps = 12/249 (4%)
Query: 72 VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
+V+ G N+ ++A+K A + F+EEA + +L + +L L G C E LV
Sbjct: 20 LVHLGYWLNKDKVAIKTIREGAMSE-EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLV 78
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
E+M + L+ + + L + L + E + Y ++ DL A + +
Sbjct: 79 FEFMEHGCLSDY-LRTQRGLFAAETLLGMCLDVCEGMAYLEEA-CVIHRDLAARNCLVGE 136
Query: 192 DVNPRLSCFGLMKNSRDGRSYSTN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLL 246
+ ++S FG+ + D + S+ + + PE R + +S ++SFG L+ ++
Sbjct: 137 NQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVF 196
Query: 247 SGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSL 306
S IP + + +I + T + ++ + C + P +RP L
Sbjct: 197 SEGKIPYENRSNSEVVEDIS----TGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRL 252
Query: 307 VTALVTLQK 315
+ L + +
Sbjct: 253 LRQLAEIAE 261
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 143 bits (363), Expect = 2e-40
Identities = 62/251 (24%), Positives = 101/251 (40%), Gaps = 20/251 (7%)
Query: 72 VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERL-L 130
V G ++AVK A A+ FL EA + QLR+ L LLG E L +
Sbjct: 22 DVMLGDYRGN-KVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 78
Query: 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD 190
V EYM +L +L + L+ +L + EA+EY ++ DL A ++
Sbjct: 79 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN-NFVHRDLAARNVLVS 137
Query: 191 DDVNPRLSCFGLMKN-SRDGRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGK 249
+D ++S FGL K S + + +T PE LR + + +S ++SFG LL ++ S
Sbjct: 138 EDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFG 197
Query: 250 HIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPR 304
+P + + D C + + C + RP+
Sbjct: 198 RVPYPRIPLKDVVPRVEKGYKMDAPDGCPP---------AVYEVMKNCWHLDAAMRPSFL 248
Query: 305 SLVTALVTLQK 315
L L ++
Sbjct: 249 QLREQLEHIKT 259
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 140 bits (354), Expect = 5e-39
Identities = 59/249 (23%), Positives = 105/249 (42%), Gaps = 22/249 (8%)
Query: 72 VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
V+ G ++AVK + + FL EA + QL+++RL L + + ++
Sbjct: 28 EVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 85
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
EYM N +L L + L +A IAE + + + ++ DL A I+ D
Sbjct: 86 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY-IHRDLRAANILVSD 144
Query: 192 DVNPRLSCFGLMKNSRDGRSYSTN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLL 246
++ +++ FGL + D + + +T PE + G T +S ++SFG LL +++
Sbjct: 145 TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 204
Query: 247 SGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 301
+ IP + + D+C E EL +L C + P +RP
Sbjct: 205 THGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE---------ELYQLMRLCWKERPEDRP 255
Query: 302 NPRSLVTAL 310
L + L
Sbjct: 256 TFDYLRSVL 264
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 140 bits (354), Expect = 8e-39
Identities = 55/258 (21%), Positives = 111/258 (43%), Gaps = 12/258 (4%)
Query: 72 VVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130
VY+G + +AVK + +FL+EA + ++++ L LLG C +
Sbjct: 32 EVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 90
Query: 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD 190
+ E+M L +L Q + + L +A I+ A+EY K ++ DL A +
Sbjct: 91 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF-IHRDLAARNCLVG 149
Query: 191 DDVNPRLSCFGLMKNSRDGRSYST-----NLAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
++ +++ FGL + + + +T PE L + + +S +++FG LL ++
Sbjct: 150 ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 209
Query: 246 LSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRS 305
+ P +DL + L + + ++ L C Q+ P +RP+
Sbjct: 210 ATYGM-SPYPGIDL---SQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAE 265
Query: 306 LVTALVTLQKDTEVPSHV 323
+ A T+ +++ + V
Sbjct: 266 IHQAFETMFQESSISDEV 283
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 138 bits (349), Expect = 3e-38
Identities = 57/244 (23%), Positives = 101/244 (41%), Gaps = 12/244 (4%)
Query: 72 VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
V+ G R+A+K FL+EA+ + +LR+ +L L E + +V
Sbjct: 32 EVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 89
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
EYM +L L + ++ + +A IA + Y ++ DL A I+ +
Sbjct: 90 TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM-NYVHRDLRAANILVGE 148
Query: 192 DVNPRLSCFGLMKNSRDGRSYSTN-----LAFTPPEYLRTGRVTPESVMYSFGTLLLDLL 246
++ +++ FGL + D + + +T PE GR T +S ++SFG LL +L
Sbjct: 149 NLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 208
Query: 247 SGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSL 306
+ +P + +R + + + L L +C + EP ERP L
Sbjct: 209 TKGRVPYPG----MVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYL 264
Query: 307 VTAL 310
L
Sbjct: 265 QAFL 268
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 139 bits (350), Expect = 3e-38
Identities = 57/293 (19%), Positives = 113/293 (38%), Gaps = 26/293 (8%)
Query: 44 YSIETLRTATSGFAMENIVSEH------GEKAPNVVYKGKL----ENQFRIAVKRFNRSA 93
++ E A FA E +S G V G L + + +A+K
Sbjct: 7 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 66
Query: 94 WPDA-RQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPM 152
R FL EA +GQ + + +L G + +++ E+M N +L
Sbjct: 67 TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSL-DSFLRQNDGQF 125
Query: 153 KWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY 212
+ + IA ++Y ++ DL A I+ + ++ ++S FGL + D S
Sbjct: 126 TVIQLVGMLRGIAAGMKYLADM-NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSD 184
Query: 213 STN---------LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR 263
T + +T PE ++ + T S ++S+G ++ +++S P + ++
Sbjct: 185 PTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWD----MTNQ 240
Query: 264 NIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316
++ + D + L +L C Q + RP +V L + ++
Sbjct: 241 DVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRN 293
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 135 bits (342), Expect = 3e-37
Identities = 50/257 (19%), Positives = 105/257 (40%), Gaps = 20/257 (7%)
Query: 72 VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131
VYKGK + + + F E + + R+ + +G + +V
Sbjct: 23 TVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG-YSTAPQLAIV 81
Query: 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD 191
++ +L HL ET + + +A A+ ++Y +K ++ DL + I +
Sbjct: 82 TQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGMDYLHAK-SIIHRDLKSNNIFLHE 139
Query: 192 DVNPRLSCFGL--MKNSRDGRSYSTNLAFTP----PEYLRT---GRVTPESVMYSFGTLL 242
D+ ++ FGL +K+ G L+ + PE +R + +S +Y+FG +L
Sbjct: 140 DLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVL 199
Query: 243 LDLLSGK----HIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPR 298
+L++G+ +I + + R + S + + RL + CL+ +
Sbjct: 200 YELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPK----AMKRLMAECLKKKRD 255
Query: 299 ERPNPRSLVTALVTLQK 315
ERP ++ ++ L +
Sbjct: 256 ERPLFPQILASIELLAR 272
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 132 bits (332), Expect = 6e-36
Identities = 55/260 (21%), Positives = 100/260 (38%), Gaps = 17/260 (6%)
Query: 56 FAMEN--IVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDA---RQFLEEARAVGQ 109
+A+E+ I G+ VY + +++F +A+K ++ A Q E
Sbjct: 3 WALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 62
Query: 110 LRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALE 169
LR+ + L G + L+ EY P T+ + L +A AL
Sbjct: 63 LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALS 120
Query: 170 YCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN--LAFTPPEYLRTG 227
YC SK R ++ D+ ++ +++ FG ++ R + L + PPE +
Sbjct: 121 YCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGR 179
Query: 228 RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287
+ ++S G L + L GK ++ R + +E F
Sbjct: 180 MHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR------VEFTFPDFVTEGARD 233
Query: 288 LASRCLQYEPRERPNPRSLV 307
L SR L++ P +RP R ++
Sbjct: 234 LISRLLKHNPSQRPMLREVL 253
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 132 bits (333), Expect = 1e-35
Identities = 57/265 (21%), Positives = 110/265 (41%), Gaps = 36/265 (13%)
Query: 72 VVYKGKL------ENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLLGCCCE 124
+VY+G E + R+A+K N +A R +FL EA + + + LLG +
Sbjct: 35 MVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ 94
Query: 125 GDERLLVAEYMPNDTLAKHLFHW--------ETQPMKWAMRLRVALHIAEALEYCTSKER 176
G L++ E M L +L P + +++A IA+ + Y + +
Sbjct: 95 GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN-K 153
Query: 177 ALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVT 230
++ DL A + +D ++ FG+ ++ + Y + + PE L+ G T
Sbjct: 154 FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFT 213
Query: 231 PESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 285
S ++SFG +L ++ + P L + + + D+C + L
Sbjct: 214 TYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPD---------ML 264
Query: 286 VRLASRCLQYEPRERPNPRSLVTAL 310
L C QY P+ RP+ +++++
Sbjct: 265 FELMRMCWQYNPKMRPSFLEIISSI 289
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 132 bits (332), Expect = 2e-35
Identities = 49/277 (17%), Positives = 98/277 (35%), Gaps = 44/277 (15%)
Query: 72 VVYKGK-LENQFRIAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLLGCCCEGDERL 129
VV+K + +A K + P R Q + E + + + + + G E
Sbjct: 21 VVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEIS 80
Query: 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF 189
+ E+M +L + L + + + +V++ + + L Y K + ++ D+ I+
Sbjct: 81 ICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV 138
Query: 190 DDDVNPRLSCFGLMKNSRDGRSYST--NLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS 247
+ +L FG+ D + S ++ PE L+ + +S ++S G L+++
Sbjct: 139 NSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAV 198
Query: 248 GKH-IPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT----------------------- 283
G++ IPP A +L Q D+ G
Sbjct: 199 GRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIV 258
Query: 284 --------------ELVRLASRCLQYEPRERPNPRSL 306
E ++CL P ER + + L
Sbjct: 259 NEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQL 295
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 129 bits (325), Expect = 7e-35
Identities = 53/256 (20%), Positives = 97/256 (37%), Gaps = 30/256 (11%)
Query: 72 VVYKGKLENQ---FRIAVKRFNRSAWPDA--RQFLEEARAVGQLRNRRLANLLGCCCEGD 126
V KG + + +AVK A A + L EA + QL N + ++G C E +
Sbjct: 22 TVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAE 80
Query: 127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR 186
+LV E L K+L + + +K + + ++ ++Y ++ DL A
Sbjct: 81 SWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEES-NFVHRDLAARN 137
Query: 187 IVFDDDVNPRLSCFGLMKNSRDGRSYSTN-------LAFTPPEYLRTGRVTPESVMYSFG 239
++ ++S FGL K R +Y + + PE + + + +S ++SFG
Sbjct: 138 VLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFG 197
Query: 240 TLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQ 294
L+ + S P S ++ C E+ L + C
Sbjct: 198 VLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPR---------EMYDLMNLCWT 248
Query: 295 YEPRERPNPRSLVTAL 310
Y+ RP ++ L
Sbjct: 249 YDVENRPGFAAVELRL 264
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 129 bits (326), Expect = 7e-35
Identities = 55/271 (20%), Positives = 101/271 (37%), Gaps = 32/271 (11%)
Query: 72 VVYKGKL---ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDE 127
V +G + Q +A+K + D + + EA+ + QL N + L+G C + +
Sbjct: 24 SVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEA 82
Query: 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRI 187
+LV E L K L + + + + ++ ++Y K ++ DL A +
Sbjct: 83 LMLVMEMAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEEK-NFVHRDLAARNV 140
Query: 188 VFDDDVNPRLSCFGLMKNSRDGRSYSTN-------LAFTPPEYLRTGRVTPESVMYSFGT 240
+ + ++S FGL K SY T L + PE + + + S ++S+G
Sbjct: 141 LLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGV 200
Query: 241 LLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQY 295
+ + LS P + I C EL L S C Y
Sbjct: 201 TMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPP---------ELYALMSDCWIY 251
Query: 296 EPRERPNPRSLVTAL----VTLQKDTEVPSH 322
+ +RP+ ++ + +L E H
Sbjct: 252 KWEDRPDFLTVEQRMRACYYSLASKVEGHHH 282
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 129 bits (325), Expect = 2e-34
Identities = 60/262 (22%), Positives = 109/262 (41%), Gaps = 26/262 (9%)
Query: 72 VVYKGKLEN----QFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGD 126
VY G L + + AVK NR + QFL E + + + +LLG C +
Sbjct: 42 CVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSE 101
Query: 127 ER-LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAY 185
L+V YM + L ++ ET + L +A+ +++ SK + ++ DL A
Sbjct: 102 GSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK-KFVHRDLAAR 159
Query: 186 RIVFDDDVNPRLSCFGLMKNSRDGRSYSTN--------LAFTPPEYLRTGRVTPESVMYS 237
+ D+ +++ FGL ++ D S + + + E L+T + T +S ++S
Sbjct: 160 NCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 219
Query: 238 FGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQ---FSSDEGTELVRLASRCLQ 294
FG LL +L++ P D N +T L+G+ L + +C
Sbjct: 220 FGVLLWELMTRGAPPYP-------DVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWH 272
Query: 295 YEPRERPNPRSLVTALVTLQKD 316
+ RP+ LV+ + +
Sbjct: 273 PKAEMRPSFSELVSRISAIFST 294
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 128 bits (324), Expect = 2e-34
Identities = 46/243 (18%), Positives = 84/243 (34%), Gaps = 14/243 (5%)
Query: 72 VVYKGK-LENQFRIAVKRFNRSAWPD---ARQFLEEARAVGQLRNRRLANLLGCCCEGDE 127
VY + + N +A+K+ + S + ++E R + +LR+ GC
Sbjct: 30 AVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHT 89
Query: 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRI 187
LV EY H +P++ V + L Y S ++ D+ A I
Sbjct: 90 AWLVMEYCLGSASDLLEVH--KKPLQEVEIAAVTHGALQGLAYLHSH-NMIHRDVKAGNI 146
Query: 188 VFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRT---GRVTPESVMYSFGTLLLD 244
+ + +L FG S+ + PE + G+ + ++S G ++
Sbjct: 147 LLSEPGLVKLGDFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE 206
Query: 245 LLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPR 304
L K + Q + + G +S CLQ P++RP
Sbjct: 207 LAERKPPLFNMNAMSALYHIAQNESPALQSGHWSE----YFRNFVDSCLQKIPQDRPTSE 262
Query: 305 SLV 307
L+
Sbjct: 263 VLL 265
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 128 bits (322), Expect = 3e-34
Identities = 59/279 (21%), Positives = 105/279 (37%), Gaps = 50/279 (17%)
Query: 72 VVYKGKLENQFR------IAVKRFNRSAWPDAR-QFLEEARAVGQLRNRRLANLLGCCCE 124
V++ + +AVK A D + F EA + + N + LLG C
Sbjct: 28 RVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV 87
Query: 125 GDERLLVAEYMPNDTLAKHLFHW----------------------ETQPMKWAMRLRVAL 162
G L+ EYM L + L P+ A +L +A
Sbjct: 88 GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIAR 147
Query: 163 HIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------L 216
+A + Y + + + ++ DL + +++ +++ FGL +N Y + +
Sbjct: 148 QVAAGMAYLSER-KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPI 206
Query: 217 AFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIP-----PSHALDLIRDRNIQTLTDS 271
+ PPE + R T ES ++++G +L ++ S P + +RD NI ++
Sbjct: 207 RWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPEN 266
Query: 272 CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
C EL L C P +RP+ S+ L
Sbjct: 267 CPL---------ELYNLMRLCWSKLPADRPSFCSIHRIL 296
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 125 bits (316), Expect = 1e-33
Identities = 46/255 (18%), Positives = 87/255 (34%), Gaps = 28/255 (10%)
Query: 72 VVYKGK-LENQFRIAVKRFNRSAWPDA--RQFLEEARAVGQLRNRRLANLLGCCCEGDER 128
K + + + K + + +A + + E + +L++ + +
Sbjct: 19 RCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNT 78
Query: 129 LL--VAEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKERALYH---- 180
L V EY LA + E Q + LRV + AL+ C + +
Sbjct: 79 TLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHR 138
Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMY 236
DL + D N +L FGL + S++ TP PE + +S ++
Sbjct: 139 DLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIW 198
Query: 237 SFGTLLLDLLSGKH----IPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRC 292
S G LL +L + IR+ + + + EL + +R
Sbjct: 199 SLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSD---------ELNEIITRM 249
Query: 293 LQYEPRERPNPRSLV 307
L + RP+ ++
Sbjct: 250 LNLKDYHRPSVEEIL 264
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 125 bits (315), Expect = 4e-33
Identities = 54/270 (20%), Positives = 104/270 (38%), Gaps = 33/270 (12%)
Query: 72 VVYKGKLEN---QFRIAVKRFNRSAWPDA-RQFLEEARAVGQLRNRR-LANLLGCCCEGD 126
V K +++ + A+KR A D R F E + +L + + NLLG C
Sbjct: 25 QVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG 84
Query: 127 ERLLVAEYMPNDTLAKHL--------------FHWETQPMKWAMRLRVALHIAEALEYCT 172
L EY P+ L L + + L A +A ++Y +
Sbjct: 85 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS 144
Query: 173 SKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN---LAFTPPEYLRTGRV 229
K + ++ DL A I+ ++ +++ FGL + + + + E L
Sbjct: 145 QK-QFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVY 203
Query: 230 TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEG---QFSSDEGTELV 286
T S ++S+G LL +++S P L + +G + + E+
Sbjct: 204 TTNSDVWSYGVLLWEIVSLGGTPY-------CGMTCAELYEKLPQGYRLEKPLNCDDEVY 256
Query: 287 RLASRCLQYEPRERPNPRSLVTALVTLQKD 316
L +C + +P ERP+ ++ +L + ++
Sbjct: 257 DLMRQCWREKPYERPSFAQILVSLNRMLEE 286
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 125 bits (314), Expect = 6e-33
Identities = 48/259 (18%), Positives = 101/259 (38%), Gaps = 19/259 (7%)
Query: 72 VVYKGKL-----ENQFRIAVKRFNRSAWPDA-RQFLEEARAVGQLRNRRLANLLGCCCEG 125
VYKG + + +A+K + P A ++ L+EA + + N + LLG C
Sbjct: 24 TVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS 83
Query: 126 DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAY 185
+L+ + MP L + + L + IA+ + Y + R ++ DL A
Sbjct: 84 TVQLIT-QLMPFGCLLDY-VREHKDNIGSQYLLNWCVQIAKGMNYLEDR-RLVHRDLAAR 140
Query: 186 RIVFDDDVNPRLSCFGLMK--NSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFG 239
++ + +++ FGL K + + ++ E + T +S ++S+G
Sbjct: 141 NVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYG 200
Query: 240 TLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRE 299
+ +L++ P D I I ++ + ++ + +C +
Sbjct: 201 VTVWELMTFGSKPY----DGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADS 256
Query: 300 RPNPRSLVTALVTLQKDTE 318
RP R L+ + +D +
Sbjct: 257 RPKFRELIIEFSKMARDPQ 275
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 123 bits (311), Expect = 9e-33
Identities = 44/256 (17%), Positives = 90/256 (35%), Gaps = 15/256 (5%)
Query: 61 IVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 119
I+ E G+ A VYK + E A K + + + ++ E + + + LL
Sbjct: 16 IIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLL 75
Query: 120 GCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALY 179
+ ++ E+ + + E +P+ + V +AL Y + ++
Sbjct: 76 DAFYYENNLWILIEFCAGGAVDAVMLELE-RPLTESQIQVVCKQTLDALNYLHDN-KIIH 133
Query: 180 HDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST----NLAFTPPEYLRT-----GRVT 230
DL A I+F D + +L+ FG+ + + PE +
Sbjct: 134 RDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYD 193
Query: 231 PESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290
++ ++S G L+++ + PP H L+ +R + S +
Sbjct: 194 YKADVWSLGITLIEMAEIE--PPHHELNPMRVLL-KIAKSEPPTLAQPSRWSSNFKDFLK 250
Query: 291 RCLQYEPRERPNPRSL 306
+CL+ R L
Sbjct: 251 KCLEKNVDARWTTSQL 266
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 122 bits (307), Expect = 6e-32
Identities = 54/274 (19%), Positives = 99/274 (36%), Gaps = 39/274 (14%)
Query: 72 VVYKG------KLENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRN-RRLANLLGCCC 123
V K ++AVK A R+ + E + + QL + + NLLG C
Sbjct: 52 KVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACT 111
Query: 124 EGDERLLVAEYMPNDTLAKHLF---------------------HWETQPMKWAMRLRVAL 162
L+ EY L +L + + + L A
Sbjct: 112 LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAY 171
Query: 163 HIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------L 216
+A+ +E+ K ++ DL A ++ ++ FGL ++ +Y +
Sbjct: 172 QVAKGMEFLEFK-SCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPV 230
Query: 217 AFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQ 276
+ PE L G T +S ++S+G LL ++ S P + D N L + +
Sbjct: 231 KWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYP---GIPVDANFYKLIQNGFKMD 287
Query: 277 FSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310
E+ + C ++ R+RP+ +L + L
Sbjct: 288 QPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFL 321
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 121 bits (305), Expect = 7e-32
Identities = 49/244 (20%), Positives = 92/244 (37%), Gaps = 20/244 (8%)
Query: 72 VVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130
VY + +A+++ N P + E + + +N + N L GDE +
Sbjct: 35 TVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWV 94
Query: 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD 190
V EY+ +L + M V +ALE+ S + ++ D+ + I+
Sbjct: 95 VMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSN-QVIHRDIKSDNILLG 150
Query: 191 DDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGTLLLDLL 246
D + +L+ FG +S + + TP PE + P+ ++S G + ++++
Sbjct: 151 MDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMI 210
Query: 247 SGKH----IPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPN 302
G+ P AL LI L Q +RCL + +R +
Sbjct: 211 EGEPPYLNENPLRALYLIATNGTPEL-------QNPEKLSAIFRDFLNRCLDMDVEKRGS 263
Query: 303 PRSL 306
+ L
Sbjct: 264 AKEL 267
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 121 bits (303), Expect = 9e-32
Identities = 53/278 (19%), Positives = 107/278 (38%), Gaps = 22/278 (7%)
Query: 54 SGFAMENIVSEHGEKAPNVVYKGKLEN-----QFRIAVKRFNRSAWPDAR-QFLEEARAV 107
S + ++ G VYKG L+ + +A+K R FL EA +
Sbjct: 7 SCVTRQKVI---GAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIM 63
Query: 108 GQLRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEA 167
GQ + + L G + +++ EYM N + + + IA
Sbjct: 64 GQFSHHNIIRLEGVISKYKPMMIITEYMENGA-LDKFLREKDGEFSVLQLVGMLRGIAAG 122
Query: 168 LEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN-------LAFTP 220
++Y + ++ DL A I+ + ++ ++S FGL + D + + +T
Sbjct: 123 MKYLANM-NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTA 181
Query: 221 PEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD 280
PE + + T S ++SFG ++ ++++ P + + + + D
Sbjct: 182 PEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWE----LSNHEVMKAINDGFRLPTPMD 237
Query: 281 EGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDTE 318
+ + +L +C Q E RP +V+ L L + +
Sbjct: 238 CPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPD 275
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 121 bits (304), Expect = 1e-31
Identities = 51/269 (18%), Positives = 94/269 (34%), Gaps = 34/269 (12%)
Query: 72 VVYKGKLENQFR------IAVKRFNRSAWPDARQ-FLEEARAVGQLRN-RRLANLLGCCC 123
V + + +AVK SA R+ + E + + L N + NLLG C
Sbjct: 38 KVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT 97
Query: 124 EGDERLLVAEYMPNDTLAKHLFHW----------------ETQPMKWAMRLRVALHIAEA 167
G L++ EY L L + + L + +A+
Sbjct: 98 IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKG 157
Query: 168 LEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPP 221
+ + SK ++ DL A I+ ++ FGL ++ ++ +Y + + P
Sbjct: 158 MAFLASK-NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAP 216
Query: 222 EYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 281
E + T ES ++S+G L +L S P + D +
Sbjct: 217 ESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPG---MPVDSKFYKMIKEGFRMLSPEHA 273
Query: 282 GTELVRLASRCLQYEPRERPNPRSLVTAL 310
E+ + C +P +RP + +V +
Sbjct: 274 PAEMYDIMKTCWDADPLKRPTFKQIVQLI 302
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 120 bits (302), Expect = 5e-31
Identities = 45/241 (18%), Positives = 77/241 (31%), Gaps = 10/241 (4%)
Query: 72 VVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130
VV++ A K D +E + + LR+ L NL + +E ++
Sbjct: 41 VVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVM 100
Query: 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD 190
+ E+M L + + E M + + + L + ++ DL I+F
Sbjct: 101 IYEFMSGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHEN-NYVHLDLKPENIMFT 158
Query: 191 DDVNPR--LSCFGLMKNSRDGRSYST---NLAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
+ L FGL + +S F PE V + M+S G L L
Sbjct: 159 TKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYIL 218
Query: 246 LSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRS 305
LSG P + D ++ S + + L +P R
Sbjct: 219 LSGL--SPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQ 276
Query: 306 L 306
Sbjct: 277 A 277
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 119 bits (299), Expect = 5e-31
Identities = 42/288 (14%), Positives = 91/288 (31%), Gaps = 50/288 (17%)
Query: 72 VVYKGKLENQFRIAVKRFNRSAWPDARQFLEEA--RAVGQLRNRRLANLLGCCCEGD--- 126
V++GK + +AVK F+ + R + EA LR+ + + + +
Sbjct: 18 EVWRGKWRGE-EVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW 73
Query: 127 -ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYC-------TSKERAL 178
+ LV++Y + +L +L + +++AL A L + K
Sbjct: 74 TQLWLVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIA 130
Query: 179 YHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSY----STNLAFTP----PEYLRT---- 226
+ DL + I+ + ++ GL + T PE L
Sbjct: 131 HRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINM 190
Query: 227 --GRVTPESVMYSFGTLLLDLLSGKHIPPSH---------------ALDLIRDRNIQTLT 269
+ +Y+ G + ++ I H +++ +R +
Sbjct: 191 KHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKL 250
Query: 270 DSCLEGQFSSDEGT-ELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316
+ ++ S E + ++ C R + L L +
Sbjct: 251 RPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 117 bits (295), Expect = 1e-30
Identities = 40/240 (16%), Positives = 73/240 (30%), Gaps = 15/240 (6%)
Query: 72 VVYKGK-LENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDERL 129
V + +AVK + D + +E L + + G EG+ +
Sbjct: 20 EVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQY 79
Query: 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF 189
L EY L + M R + + Y + D+ ++
Sbjct: 80 LFLEYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLHGI-GITHRDIKPENLLL 136
Query: 190 DDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPEYLRTGRVTPESV-MYSFGTLL 242
D+ N ++S FGL R L + PE L+ E V ++S G +L
Sbjct: 137 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 196
Query: 243 LDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPN 302
+L+G+ + + + + L+ + L P R
Sbjct: 197 TAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLH---KILVENPSARIT 253
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 117 bits (294), Expect = 1e-30
Identities = 51/263 (19%), Positives = 98/263 (37%), Gaps = 27/263 (10%)
Query: 72 VVYKGKL----ENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGD 126
V++G +A+K R+ FL+EA + Q + + L+G E +
Sbjct: 22 DVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-N 80
Query: 127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR 186
++ E L + + A + A ++ AL Y SK R ++ D+ A
Sbjct: 81 PVWIIMELCTLGEL-RSFLQVRKYSLDLASLILYAYQLSTALAYLESK-RFVHRDIAARN 138
Query: 187 IVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEY-----LRTGRVTPESVMYSFGTL 241
++ + +L FGL + D Y + P ++ + R T S ++ FG
Sbjct: 139 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVC 198
Query: 242 LLDLLSGKHIP-----PSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYE 296
+ ++L P + + I + + +C L L ++C Y+
Sbjct: 199 MWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPP---------TLYSLMTKCWAYD 249
Query: 297 PRERPNPRSLVTALVTLQKDTEV 319
P RP L L T+ ++ +
Sbjct: 250 PSRRPRFTELKAQLSTILEEEKA 272
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 116 bits (292), Expect = 3e-30
Identities = 45/247 (18%), Positives = 90/247 (36%), Gaps = 17/247 (6%)
Query: 72 VVYKGKL-ENQFRIAVKRFNRSAWPDA--RQFLEEARAVGQLRNRRLANLLGCCCEGDER 128
VYKG E +A + ++F EEA + L++ + +
Sbjct: 24 TVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKG 83
Query: 129 ----LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH-DLN 183
+LV E M + TL +L + MK + I + L++ ++ + H DL
Sbjct: 84 KKCIVLVTELMTSGTLKTYLK--RFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLK 141
Query: 184 AYRIVFDD-DVNPRLSCFGLMKNSRDGRSYST--NLAFTPPEYLRTGRVTPESVMYSFGT 240
I + ++ GL R + + F PE + +Y+FG
Sbjct: 142 CDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGM 200
Query: 241 LLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRER 300
+L++ + ++ P S + + + +T F E+ + C++ ER
Sbjct: 201 CMLEMATSEY-PYSECQN--AAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDER 257
Query: 301 PNPRSLV 307
+ + L+
Sbjct: 258 YSIKDLL 264
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 116 bits (291), Expect = 3e-30
Identities = 51/257 (19%), Positives = 91/257 (35%), Gaps = 20/257 (7%)
Query: 72 VVYKGKLE----NQFRIAVKRFNRSAWPDA---RQFLEEARAVGQLRNRRLANLLGCCCE 124
VV +G+ + +AVK F+ E A+ L +R L L G
Sbjct: 23 VVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT 82
Query: 125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 184
+ +V E P +L R A+ +AE + Y SK ++ DL A
Sbjct: 83 PPMK-MVTELAPLGSLLDR-LRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF-IHRDLAA 139
Query: 185 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN-------LAFTPPEYLRTGRVTPESVMYS 237
++ ++ FGLM+ + A+ PE L+T + S +
Sbjct: 140 RNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWM 199
Query: 238 FGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEP 297
FG L ++ + P L + + + D ++ + +C ++P
Sbjct: 200 FGVTLWEMFTYGQEPWI---GLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKP 256
Query: 298 RERPNPRSLVTALVTLQ 314
+RP +L L+ Q
Sbjct: 257 EDRPTFVALRDFLLEAQ 273
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 115 bits (288), Expect = 5e-29
Identities = 49/244 (20%), Positives = 83/244 (34%), Gaps = 16/244 (6%)
Query: 72 VVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130
VV++ K N D E + QL + +L NL + E +L
Sbjct: 44 VVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVL 103
Query: 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD 190
+ E++ L + E M A + E L++ ++ D+ I+ +
Sbjct: 104 ILEFLSGGELFDRI-AAEDYKMSEAEVINYMRQACEGLKHMHEH-SIVHLDIKPENIMCE 161
Query: 191 DDVNPR--LSCFGLMKNSRDGRS---YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDL 245
+ FGL + F PE + V + M++ G L L
Sbjct: 162 TKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVL 221
Query: 246 LSGKH-IPPSHALDLIRDRNIQTLTDSCLEGQFS--SDEGTELVRLASRCLQYEPRERPN 302
LSG L+ + +N++ E FS S E + ++ LQ EPR+R
Sbjct: 222 LSGLSPFAGEDDLETL--QNVKRCDWEFDEDAFSSVSPEAKDFIK---NLLQKEPRKRLT 276
Query: 303 PRSL 306
Sbjct: 277 VHDA 280
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 112 bits (280), Expect = 2e-28
Identities = 40/255 (15%), Positives = 80/255 (31%), Gaps = 23/255 (9%)
Query: 72 VVYKGK-LENQFRIAVKRFNRSAWPDA---RQFLEEARAVGQLRNRRLANLLGCCCEGDE 127
V + L A+K + E + +L + L + ++
Sbjct: 23 TVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEK 82
Query: 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRI 187
Y N L K++ I ALEY K ++ DL I
Sbjct: 83 LYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHGK-GIIHRDLKPENI 139
Query: 188 VFDDDVNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTL 241
+ ++D++ +++ FG K S+ + PE L S +++ G +
Sbjct: 140 LLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCI 199
Query: 242 LLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT--ELVRLASRCLQYEPRE 299
+ L++G PP R N + ++ ++ E + L + L + +
Sbjct: 200 IYQLVAGL--PP------FRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATK 251
Query: 300 RPNPRSLVTALVTLQ 314
R +
Sbjct: 252 RLGCEEMEGYGPLKA 266
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 111 bits (279), Expect = 4e-28
Identities = 38/242 (15%), Positives = 73/242 (30%), Gaps = 11/242 (4%)
Query: 72 VVYKGK-LENQFRIAVKRFNRSAWPDARQ-FLEEARAVGQLRNRRLANLLGCCCEGDERL 129
V + Q +A+K + A E + ++++ + L G
Sbjct: 24 EVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLY 83
Query: 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERA--LYHDLNAYRI 187
L+ + + L + E R+ + +A++Y N
Sbjct: 84 LIMQLVSGGELFDRIV--EKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYY 141
Query: 188 VFDDDVNPRLSCFGLMKNSRDGRSYST---NLAFTPPEYLRTGRVTPESVMYSFGTLLLD 244
D+D +S FGL K G ST + PE L + +S G +
Sbjct: 142 SLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYI 201
Query: 245 LLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPR 304
LL G PP + + + + + + D ++ +P +R
Sbjct: 202 LLCGY--PPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCE 259
Query: 305 SL 306
Sbjct: 260 QA 261
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 109 bits (274), Expect = 1e-27
Identities = 45/245 (18%), Positives = 79/245 (32%), Gaps = 20/245 (8%)
Query: 72 VVYKGK-LENQFRIAVKRFNRSAWPDA---RQFLEEARAVGQLRNRRLANLLGCCCE--- 124
V+ + L +AVK D +F EA+ L + + +
Sbjct: 22 EVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETP 81
Query: 125 -GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLN 183
G +V EY+ TL + PM + V +AL + ++ D+
Sbjct: 82 AGPLPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQN-GIIHRDVK 138
Query: 184 AYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNL-------AFTPPEYLRTGRVTPESVMY 236
I+ ++ FG+ + D + T + PE R V S +Y
Sbjct: 139 PANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVY 198
Query: 237 SFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYE 296
S G +L ++L+G+ PP + D +L + + L
Sbjct: 199 SLGCVLYEVLTGE--PPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKN 256
Query: 297 PRERP 301
P R
Sbjct: 257 PENRY 261
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 109 bits (274), Expect = 2e-27
Identities = 40/258 (15%), Positives = 92/258 (35%), Gaps = 23/258 (8%)
Query: 61 IVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLL 119
I + G +V++ ++ K D +E + R+R + +L
Sbjct: 9 IAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLH 67
Query: 120 GCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALY 179
+E +++ E++ + + + + + + + EAL++ S +
Sbjct: 68 ESFESMEELVMIFEFISGLDIFERI-NTSAFELNEREIVSYVHQVCEALQFLHSH-NIGH 125
Query: 180 HDLNAYRIVFDDDVNPR--LSCFGLMKNSRDGRSYSTN---LAFTPPEYLRTGRVTPESV 234
D+ I++ + + FG + + G ++ + PE + V+ +
Sbjct: 126 FDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATD 185
Query: 235 MYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT------ELVRL 288
M+S GTL+ LLSG + Q + ++ + +++ DE E +
Sbjct: 186 MWSLGTLVYVLLSGIN--------PFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDF 237
Query: 289 ASRCLQYEPRERPNPRSL 306
R L E + R
Sbjct: 238 VDRLLVKERKSRMTASEA 255
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 107 bits (267), Expect = 1e-26
Identities = 48/271 (17%), Positives = 92/271 (33%), Gaps = 33/271 (12%)
Query: 72 VVYKG------KLENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCC- 123
V + K +AVK A + R + E + + + + L C
Sbjct: 28 QVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACT 87
Query: 124 -EGDERLLVAEYMPNDTLAKHLFH--------------WETQPMKWAMRLRVALHIAEAL 168
G +++ E+ L+ +L + + + +A+ +
Sbjct: 88 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGM 147
Query: 169 EYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPPE 222
E+ S+ + ++ DL A I+ + ++ FGL ++ Y L + PE
Sbjct: 148 EFLASR-KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 206
Query: 223 YLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG 282
+ T +S ++SFG LL ++ S P + + D +
Sbjct: 207 TIFDRVYTIQSDVWSFGVLLWEIFSLGA-SPYPGVKI--DEEFCRRLKEGTRMRAPDYTT 263
Query: 283 TELVRLASRCLQYEPRERPNPRSLVTALVTL 313
E+ + C EP +RP LV L L
Sbjct: 264 PEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 294
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 105 bits (263), Expect = 4e-26
Identities = 52/269 (19%), Positives = 98/269 (36%), Gaps = 35/269 (13%)
Query: 72 VVYKGKL--------ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQL-RNRRLANLLGC 121
V + ++AVK A D + E + + +++ + NLLG
Sbjct: 28 QVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGA 87
Query: 122 CCEGDERLLVAEYMPNDTLAKHLFHW--------------ETQPMKWAMRLRVALHIAEA 167
C + ++ EY L ++L + + + A +A
Sbjct: 88 CTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARG 147
Query: 168 LEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN------LAFTPP 221
+EY SK + ++ DL A ++ +D +++ FGL ++ Y + + P
Sbjct: 148 MEYLASK-KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP 206
Query: 222 EYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 281
E L T +S ++SFG LL ++ + P + + + L S+
Sbjct: 207 EALFDRIYTHQSDVWSFGVLLWEIFTLGG-SPYPGVPV---EELFKLLKEGHRMDKPSNC 262
Query: 282 GTELVRLASRCLQYEPRERPNPRSLVTAL 310
EL + C P +RP + LV L
Sbjct: 263 TNELYMMMRDCWHAVPSQRPTFKQLVEDL 291
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 105 bits (264), Expect = 4e-26
Identities = 44/258 (17%), Positives = 94/258 (36%), Gaps = 20/258 (7%)
Query: 56 FAMEN--IVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQ---FLEEARAVGQ 109
+++++ I+ G + V+ + N A+K + +Q +E +
Sbjct: 1 YSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSI 60
Query: 110 LRNRRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALE 169
+ + + + G + + ++ +Y+ L ++Q + A + ALE
Sbjct: 61 VTHPFIIRMWGTFQDAQQIFMIMDYIEGGEL--FSLLRKSQRFPNPVAKFYAAEVCLALE 118
Query: 170 YCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD-GRSYSTNLAFTPPEYLRTGR 228
Y SK +Y DL I+ D + + +++ FG K D + + PE + T
Sbjct: 119 YLHSK-DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKP 177
Query: 229 VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT--ELV 286
+SFG L+ ++L+G D N + L + ++
Sbjct: 178 YNKSIDWWSFGILIYEMLAGYTPFY--------DSNTMKTYEKILNAELRFPPFFNEDVK 229
Query: 287 RLASRCLQYEPRERPNPR 304
L SR + + +R
Sbjct: 230 DLLSRLITRDLSQRLGNL 247
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 103 bits (258), Expect = 2e-25
Identities = 44/253 (17%), Positives = 82/253 (32%), Gaps = 27/253 (10%)
Query: 72 VVYKGK-LENQFRIAVKRFNRSAWPDARQ------FLEEARAVGQLRNRRLANLLGCCCE 124
VV K + + A K + +R+ E + ++++ + L
Sbjct: 25 VVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN 84
Query: 125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 184
+ +L+ E + L E + + I + Y S + A + DL
Sbjct: 85 KTDVILILELVAGGELFDF--LAEKESLTEEEATEFLKQILNGVYYLHSLQIA-HFDLKP 141
Query: 185 YRIVFDDDVNPR----LSCFGLMKNSRDGRSYSTNL---AFTPPEYLRTGRVTPESVMYS 237
I+ D P+ + FGL G + F PE + + E+ M+S
Sbjct: 142 ENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWS 201
Query: 238 FGTLLLDLLSGKHIPPSH----ALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCL 293
G + LLSG L + N + E ++ S+ R L
Sbjct: 202 IGVITYILLSGASPFLGDTKQETLANVSAVNYE------FEDEYFSNTSALAKDFIRRLL 255
Query: 294 QYEPRERPNPRSL 306
+P++R +
Sbjct: 256 VKDPKKRMTIQDS 268
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 104 bits (260), Expect = 2e-25
Identities = 45/242 (18%), Positives = 81/242 (33%), Gaps = 22/242 (9%)
Query: 72 VVYKGK-LENQFRIAVKRFNRSAW---PDARQFLEEARAVG-QLRNRRLANLLGCCCEGD 126
V+ + + A+K + D + E R + + L ++ +
Sbjct: 17 KVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKE 76
Query: 127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYR 186
V EY+ L H+ + A I L++ SK +Y DL
Sbjct: 77 NLFFVMEYLNGGDLMYHIQ--SCHKFDLSRATFYAAEIILGLQFLHSK-GIVYRDLKLDN 133
Query: 187 IVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFT----PPEYLRTGRVTPESVMYSFGTLL 242
I+ D D + +++ FG+ K + G + + T PE L + +SFG LL
Sbjct: 134 ILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLL 193
Query: 243 LDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG--TELVRLASRCLQYEPRER 300
++L G+ ++ + L S E L + EP +R
Sbjct: 194 YEMLIGQSPFH--------GQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFVREPEKR 245
Query: 301 PN 302
Sbjct: 246 LG 247
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 105 bits (262), Expect = 2e-25
Identities = 45/240 (18%), Positives = 79/240 (32%), Gaps = 16/240 (6%)
Query: 72 VVYKGK-LENQFRIAVKRFNRSAWPDA---RQFLEEARAVGQLRNRRLAN---LLGCCCE 124
VY + + A+K ++ L E + + +
Sbjct: 19 EVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT 78
Query: 125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNA 184
D+ + + M L HL A A I LE+ ++ +Y DL
Sbjct: 79 PDKLSFILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILGLEHMHNR-FVVYRDLKP 135
Query: 185 YRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN--LAFTPPEYLRTGR-VTPESVMYSFGTL 241
I+ D+ + R+S GL + + +++ + PE L+ G + +S G +
Sbjct: 136 ANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCM 195
Query: 242 LLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERP 301
L LL G H + + TLT + S E L+ LQ + R
Sbjct: 196 LFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLE---GLLQRDVNRRL 252
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 101 bits (253), Expect = 7e-25
Identities = 44/255 (17%), Positives = 79/255 (30%), Gaps = 25/255 (9%)
Query: 72 VVYKGK-LENQFRIAVKRFNRSAWPDA---------RQFLEEARAVGQLRN-RRLANLLG 120
VV + AVK + + L+E + ++ + L
Sbjct: 18 VVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKD 77
Query: 121 CCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYH 180
LV + M L +L E + ++ + E + ++
Sbjct: 78 TYETNTFFFLVFDLMKKGELFDYLT--EKVTLSEKETRKIMRALLEVICALHKL-NIVHR 134
Query: 181 DLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST---NLAFTPPEYLRTGRV------TP 231
DL I+ DDD+N +L+ FG G ++ PE +
Sbjct: 135 DLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGK 194
Query: 232 ESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291
E M+S G ++ LL+G PP + + + D + L SR
Sbjct: 195 EVDMWSTGVIMYTLLAGS--PPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSR 252
Query: 292 CLQYEPRERPNPRSL 306
L +P++R
Sbjct: 253 FLVVQPQKRYTAEEA 267
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 98.2 bits (244), Expect = 9e-24
Identities = 48/248 (19%), Positives = 90/248 (36%), Gaps = 27/248 (10%)
Query: 72 VVYKGK-LENQFRIAVKRFNRS------AWPDARQFLEEARAVGQLRN--RRLANLLGCC 122
VY G + + +A+K + P+ + E + ++ + + LL
Sbjct: 19 SVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWF 78
Query: 123 CEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDL 182
D +L+ E E ++ + + EA+ +C + L+ D+
Sbjct: 79 ERPDSFVLILERPEPVQDLFDFIT-ERGALQEELARSFFWQVLEAVRHCHNCGV-LHRDI 136
Query: 183 NAYRIVFD-DDVNPRLSCFGLMKNSRDGRSYSTN--LAFTPPEYLRTGRVTPESV-MYSF 238
I+ D + +L FG +D + ++PPE++R R S ++S
Sbjct: 137 KDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 196
Query: 239 GTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPR 298
G LL D++ G P H ++IR + F +E L CL P
Sbjct: 197 GILLYDMVCGDI-PFEHDEEIIRGQVF-----------FRQRVSSECQHLIRWCLALRPS 244
Query: 299 ERPNPRSL 306
+RP +
Sbjct: 245 DRPTFEEI 252
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 98.0 bits (243), Expect = 2e-23
Identities = 38/257 (14%), Positives = 76/257 (29%), Gaps = 23/257 (8%)
Query: 72 VVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCC-EGDERL 129
+Y G + +A+K Q E++ ++ + C EGD +
Sbjct: 22 DIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNV 79
Query: 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVF 189
+V E + LF++ ++ L +A + +EY SK ++ D+ +
Sbjct: 80 MVMELLGPSLE--DLFNFCSRKFSLKTVLLLADQMISRIEYIHSK-NFIHRDVKPDNFLM 136
Query: 190 ---DDDVNPRLSCFGLMKNSRDGRSYSTN-----------LAFTPPEYLRTGRVTPESVM 235
+ FGL K RD R++ + + +
Sbjct: 137 GLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDL 196
Query: 236 YSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTD--SCLEGQFSSDEGTELVRLASRCL 293
S G +L+ G R + + S +E + C
Sbjct: 197 ESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCR 256
Query: 294 QYEPRERPNPRSLVTAL 310
++P+ L
Sbjct: 257 SLRFDDKPDYSYLRQLF 273
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 97.6 bits (242), Expect = 3e-23
Identities = 47/268 (17%), Positives = 82/268 (30%), Gaps = 36/268 (13%)
Query: 72 VVYKGK-LENQFRIAVKRFNRSAWPDA-----RQFLEEARAVGQLRNRRLANLLGCCCEG 125
VYK + +A+K+ +A R L E + + +L + + LL
Sbjct: 13 TVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHK 72
Query: 126 DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAY 185
LV ++M D + + + + L + LEY + DL
Sbjct: 73 SNISLVFDFMETDLE--VIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWIL-HRDLKPN 129
Query: 186 RIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFT-----PPEYLRTGRVTPESVMYSFGT 240
++ D++ +L+ FGL K+ T+ T P M++ G
Sbjct: 130 NLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGC 189
Query: 241 LLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLE----------------------GQFS 278
+L +LL P + R +TL E
Sbjct: 190 ILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIF 249
Query: 279 SDEGTELVRLASRCLQYEPRERPNPRSL 306
S G +L+ L + P R
Sbjct: 250 SAAGDDLLDLIQGLFLFNPCARITATQA 277
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 96.4 bits (239), Expect = 7e-23
Identities = 42/284 (14%), Positives = 83/284 (29%), Gaps = 32/284 (11%)
Query: 60 NIVSEH-------GEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR 111
N+V H GE + V+++G L N ++A+K R + DA Q +E R L
Sbjct: 1 NVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLA 58
Query: 112 NRR-LANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEY 170
+ N+ EG +LV + + L + A + ++
Sbjct: 59 GCTGIPNVYYFGQEGLHNVLVIDLLGPSLE--DLLDLCGRKFSVKTVAMAAKQMLARVQS 116
Query: 171 CTSKERALYHDLNAYRIVFDDDVNPRLSC-----FGLMKNSRDGRSYSTN---------- 215
K +Y D+ + + + FG++K RD +
Sbjct: 117 IHEK-SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSG 175
Query: 216 -LAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPP--SHALDLIRDRNIQTLTDSC 272
+ + + + G + + L G A + + I S
Sbjct: 176 TARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQST 235
Query: 273 LEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316
+ + E + P+ L + +
Sbjct: 236 PLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLER 279
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 95.7 bits (237), Expect = 9e-23
Identities = 42/281 (14%), Positives = 95/281 (33%), Gaps = 35/281 (12%)
Query: 58 MEN--IVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDA--RQFLEEARAVGQLRNR 113
ME + + GE VVYK + A+K+ + + E + +L++
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHS 60
Query: 114 RLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTS 173
+ L +LV E++ D L ++ L + + YC
Sbjct: 61 NIVKLYDVIHTKKRLVLVFEHLDQDLK--KLLDVCEGGLESVTAKSFLLQLLNGIAYCHD 118
Query: 174 KERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP-----PEYLRTGR 228
+ R L+ DL ++ + + +++ FGL + T+ T + + +
Sbjct: 119 R-RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKK 177
Query: 229 VTPESVMYSFGTLLLDLLSGKHIPPS-----------------------HALDLIRDRNI 265
+ ++S G + ++++G + P + +L +
Sbjct: 178 YSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPN 237
Query: 266 QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSL 306
T+ + F + L S+ L+ +P +R +
Sbjct: 238 FTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQA 278
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 96.4 bits (239), Expect = 1e-22
Identities = 50/271 (18%), Positives = 85/271 (31%), Gaps = 41/271 (15%)
Query: 72 VVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDER-- 128
VVY+ KL ++ +A+K+ + D R E + + +L + + L E+
Sbjct: 35 VVYQAKLCDSGELVAIKKVLQ----DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKD 90
Query: 129 ----LLVAEYMPNDTLAKHLFHWET-QPMKWAMRLRVALHIAEALEYCTSKERALYHDLN 183
LV +Y+P + Q + + +L Y S + D+
Sbjct: 91 EVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF-GICHRDIK 149
Query: 184 AYRIVFDDD-VNPRLSCFGLMKNSRDGRSYSTNLAFT----PPEYLRTGRVTPESVMYSF 238
++ D D +L FG K G + + P T ++S
Sbjct: 150 PQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSA 209
Query: 239 GTLLLDLLSGKHI----PPSHALDLI-------------------RDRNIQTLTDSCLEG 275
G +L +LL G+ I L I + +
Sbjct: 210 GCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTK 269
Query: 276 QFSSDEGTELVRLASRCLQYEPRERPNPRSL 306
F E + L SR L+Y P R P
Sbjct: 270 VFRPRTPPEAIALCSRLLEYTPTARLTPLEA 300
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 94.2 bits (233), Expect = 4e-22
Identities = 51/282 (18%), Positives = 103/282 (36%), Gaps = 35/282 (12%)
Query: 58 MEN--IVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRN 112
MEN V + GE VVYK + +A+K+ + + E + +L +
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 113 RRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCT 172
+ LL ++ LV E++ D L K + + + + + L +C
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 173 SKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFT-----PPEYLRTG 227
S R L+ DL ++ + + +L+ FGL + T+ T P L
Sbjct: 120 SH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 228 RVTPESVMYSFGTLLLDLLSGKHI-PPSHALDLIRD--RNIQTLTDSCLEGQFSSDE--- 281
+ ++S G + ++++ + + P +D + R + T + G S +
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238
Query: 282 -----------------GTELVRLASRCLQYEPRERPNPRSL 306
+ L S+ L Y+P +R + ++
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 280
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 94.5 bits (234), Expect = 7e-22
Identities = 39/271 (14%), Positives = 93/271 (34%), Gaps = 37/271 (13%)
Query: 72 VVYKGK-LENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129
+V N+ R+A+K+ + ++ L E + + + R+ + +
Sbjct: 23 MVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ 82
Query: 130 LVAEYMPNDTLAKHLFHW-ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIV 188
+ Y+ + L+ +TQ + I L+Y S L+ DL ++
Sbjct: 83 MKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLL 141
Query: 189 FDDDVNPRLSCFGLMKNSRDGRSYST-------NLAFTPPEYLRTGRVTPESV-MYSFGT 240
+ + ++ FGL + + ++ + PE + + +S+ ++S G
Sbjct: 142 LNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC 201
Query: 241 LLLDLLSGKHI-------------------PPSHALDLIRDRNIQTLTDSCLEG------ 275
+L ++LS + I P L+ I + + S
Sbjct: 202 ILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWN 261
Query: 276 QFSSDEGTELVRLASRCLQYEPRERPNPRSL 306
+ + ++ + L + L + P +R
Sbjct: 262 RLFPNADSKALDLLDKMLTFNPHKRIEVEQA 292
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 91.8 bits (227), Expect = 5e-21
Identities = 45/242 (18%), Positives = 82/242 (33%), Gaps = 17/242 (7%)
Query: 72 VVYKGK-LENQFRIAVKRFNRS---AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDE 127
V + A+K + A + + E+R + R+ L L D
Sbjct: 20 KVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDR 79
Query: 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRI 187
V EY L HL + A I ALEY S+ +Y D+ +
Sbjct: 80 LCFVMEYANGGELFFHLSRERVFTEERARFY--GAEIVSALEYLHSR-DVVYRDIKLENL 136
Query: 188 VFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTP----PEYLRTGRVTPESVMYSFGTLLL 243
+ D D + +++ FGL K + TP PE L + G ++
Sbjct: 137 MLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMY 196
Query: 244 DLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNP 303
+++ G+ + + + + + E +F E L + L+ +P++R
Sbjct: 197 EMMCGRLPFYNQDHERLFELILME------EIRFPRTLSPEAKSLLAGLLKKDPKQRLGG 250
Query: 304 RS 305
Sbjct: 251 GP 252
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 90.9 bits (225), Expect = 8e-21
Identities = 42/249 (16%), Positives = 77/249 (30%), Gaps = 20/249 (8%)
Query: 72 VVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCC----CEG 125
V + Q + A+K D + E + + + ++
Sbjct: 27 KVLQIFNKRTQEKFALKMLQ-----DCPKARREVELHWRASQCPHIVRIVDVYENLYAGR 81
Query: 126 DERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAY 185
L+V E + L + Q + I EA++Y S + D+
Sbjct: 82 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI-NIAHRDVKPE 140
Query: 186 RIVFDDDVNP---RLSCFGLMKNSRDGRSYSTN---LAFTPPEYLRTGRVTPESVMYSFG 239
+++ +L+ FG K + S +T + PE L + M+S G
Sbjct: 141 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLG 200
Query: 240 TLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLE--GQFSSDEGTELVRLASRCLQYEP 297
++ LL G S+ I + E S+ E+ L L+ EP
Sbjct: 201 VIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEP 260
Query: 298 RERPNPRSL 306
+R
Sbjct: 261 TQRMTITEF 269
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 90.3 bits (223), Expect = 2e-20
Identities = 37/271 (13%), Positives = 88/271 (32%), Gaps = 41/271 (15%)
Query: 72 VVYKGK-LENQFRIAVKRFNRS--AWPDARQFLEEARAVGQLRNRRLANLLGCCCEGD-- 126
V ++A+K+ R + A++ E R + +R+ + LL +
Sbjct: 33 AVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETL 92
Query: 127 ----ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDL 182
+ LV +M D + + + + + + L Y + ++ DL
Sbjct: 93 DDFTDFYLVMPFMGTD----LGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAA-GIIHRDL 147
Query: 183 NAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAF--TPPEYLRTGRVTPESVMYSFGT 240
+ ++D ++ FGL + + + + P L R T ++S G
Sbjct: 148 KPGNLAVNEDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGC 207
Query: 241 LLLDLLSGKHI-------------------PPSHALDLIRDRNIQTLTDSCLE------G 275
++ ++++GK + PP+ + ++ + E
Sbjct: 208 IMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFA 267
Query: 276 QFSSDEGTELVRLASRCLQYEPRERPNPRSL 306
++ V L + L + +R
Sbjct: 268 SILTNASPLAVNLLEKMLVLDAEQRVTAGEA 298
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 86.9 bits (214), Expect = 2e-19
Identities = 41/281 (14%), Positives = 85/281 (30%), Gaps = 36/281 (12%)
Query: 61 IVSEHGEKAPNVVYKGK--LENQFRIAVKRFNRSAWPD-----ARQFLEEARAVGQLRNR 113
V+E GE A V+K + +A+KR + + + R + +
Sbjct: 11 CVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHP 70
Query: 114 RLANLLGCCCEGDERLLVAEYMPNDTLA----KHLFHWETQPMKWAMRLRVALHIAEALE 169
+ L C + + + +L + + + L+
Sbjct: 71 NVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLD 130
Query: 170 YCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN---LAFTPPEYLRT 226
+ S R ++ DL I+ +L+ FGL + + ++ L + PE L
Sbjct: 131 FLHSH-RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQ 189
Query: 227 GRVTPESVMYSFGTLLLDLLSGKHI---------------------PPSHALDLIRDRNI 265
++S G + ++ K + D+ R
Sbjct: 190 SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQA 249
Query: 266 QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSL 306
+ +F +D L +CL + P +R + S
Sbjct: 250 FHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSA 290
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 85.4 bits (210), Expect = 3e-19
Identities = 40/283 (14%), Positives = 80/283 (28%), Gaps = 37/283 (13%)
Query: 58 MEN--IVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDA--RQFLEEARAVGQLRN 112
M+ + + GE V+K K E +A+KR + L E + +L++
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH 60
Query: 113 RRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCT 172
+ + L + LV E+ D F + + + + L +C
Sbjct: 61 KNIVRLHDVLHSDKKLTLVFEFCDQDLK--KYFDSCNGDLDPEIVKSFLFQLLKGLGFCH 118
Query: 173 SKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFT-----PPEYLRTG 227
S+ L+ DL ++ + + +L+ FGL + + T P
Sbjct: 119 SR-NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAK 177
Query: 228 RVTPESVMYSFGTLLLDLLSGKHIP------------------------PSHALDLIRDR 263
+ M+S G + +L + L +
Sbjct: 178 LYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYK 237
Query: 264 NIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSL 306
+ L L+ P +R +
Sbjct: 238 PYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEA 280
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 83.7 bits (206), Expect = 3e-18
Identities = 45/236 (19%), Positives = 76/236 (32%), Gaps = 14/236 (5%)
Query: 72 VVYKGK-LENQFRIAVKRFNRSAWPDARQ---FLEEARAVGQLRNRRLANLLGCCCEGDE 127
V K E+ A+K ++ +Q L E R + + L L +
Sbjct: 56 RVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSN 115
Query: 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRI 187
+V EY+ + HL A I EY S +Y DL +
Sbjct: 116 LYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSL-DLIYRDLKPENL 172
Query: 188 VFDDDVNPRLSCFGLMKNSRD-GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLL 246
+ D +++ FG K + + PE + + ++ G L+ ++
Sbjct: 173 LIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 247 SGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPN 302
+G PP A I+ FSS +L L LQ + +R
Sbjct: 233 AGY--PPFFADQPIQIYEKIVSGKVRFPSHFSS----DLKDLLRNLLQVDLTKRFG 282
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 82.2 bits (202), Expect = 7e-18
Identities = 45/292 (15%), Positives = 95/292 (32%), Gaps = 49/292 (16%)
Query: 61 IVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDA--RQFLEEARAVGQLRNRRLAN 117
+++ G+ V+K + + ++A+K+ + L E + + L++ + N
Sbjct: 14 KLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVN 73
Query: 118 LLGCCCEGDER--------LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALE 169
L+ C LV ++ +D L + RV + L
Sbjct: 74 LIEICRTKASPYNRCKGSIYLVFDFCEHDLA--GLLSNVLVKFTLSEIKRVMQMLLNGLY 131
Query: 170 YCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN--------LAFTPP 221
Y + L+ D+ A ++ D +L+ FGL + ++ N L + PP
Sbjct: 132 YIHRN-KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPP 190
Query: 222 EYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPS----HALDLIRD-------------- 262
E L R P ++ G ++ ++ + I H L LI
Sbjct: 191 ELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVD 250
Query: 263 --------RNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSL 306
++ + + + L + L +P +R +
Sbjct: 251 NYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDA 302
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 77.2 bits (189), Expect = 4e-16
Identities = 46/262 (17%), Positives = 84/262 (32%), Gaps = 23/262 (8%)
Query: 58 MEN--IVSEHGEKAPNVVYKGKL----ENQFRIAVKRFNRSAWPD----ARQFLEEARAV 107
+EN ++ G A V+ + + A+K ++ E + +
Sbjct: 23 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVL 82
Query: 108 GQLRNRRLANLLGCCCEGDERLLVA-EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAE 166
+R L + + +L + +Y+ L HL E I
Sbjct: 83 EHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQI--YVGEIVL 140
Query: 167 ALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTNLAFTPPEY--- 223
ALE+ +Y D+ I+ D + + L+ FGL K + EY
Sbjct: 141 ALEHLHKL-GIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAP 199
Query: 224 --LRTGR--VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSS 279
+R G +S G L+ +LL+G P + + E +
Sbjct: 200 DIVRGGDSGHDKAVDWWSLGVLMYELLTGA--SPFTVDGEKNSQAEISRRILKSEPPYPQ 257
Query: 280 DEGTELVRLASRCLQYEPRERP 301
+ L R L +P++R
Sbjct: 258 EMSALAKDLIQRLLMKDPKKRL 279
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 73.8 bits (180), Expect = 5e-15
Identities = 42/278 (15%), Positives = 84/278 (30%), Gaps = 33/278 (11%)
Query: 61 IVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRS--AWPDARQFLEEARAVGQLRNRRLAN 117
+S G A V + R+AVK+ +R + A++ E R + +++ +
Sbjct: 22 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG 81
Query: 118 LLGCCCEGDERLLVAEYMPNDTLAKHLFH--WETQPMKWAMRLRVALHIAEALEYCTSKE 175
LL + L + + Q + + I L+Y S
Sbjct: 82 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 140
Query: 176 RALYHDLNAYRIVFDDDVNPRLSCFGL--MKNSRDGRSYSTNLAFTPPEYLRTGRVTPES 233
++ DL + ++D ++ FGL + +T P L
Sbjct: 141 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTV 200
Query: 234 VMYSFGTLLLDLLSGKH-------------------IPPSHALDLIRDRNIQTLTDSCLE 274
++S G ++ +LL+G+ P + L I + + S +
Sbjct: 201 DIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQ 260
Query: 275 ------GQFSSDEGTELVRLASRCLQYEPRERPNPRSL 306
V L + L + +R
Sbjct: 261 MPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQA 298
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 71.0 bits (173), Expect = 4e-14
Identities = 42/276 (15%), Positives = 87/276 (31%), Gaps = 50/276 (18%)
Query: 72 VVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERL 129
V++ + N ++ VK ++ E + + LR + L + R
Sbjct: 50 EVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRT 106
Query: 130 --LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRI 187
LV E++ N + Q + I +AL+YC S ++ D+ + +
Sbjct: 107 PALVFEHVNNTDFKQLY-----QTLTDYDIRFYMYEILKALDYCHSM-GIMHRDVKPHNV 160
Query: 188 VFD-DDVNPRLSCFGLMKNSRDGRSYS----TNLAFTPPEYLRTGRVTPESVMYSFGTLL 242
+ D + RL +GL + G+ Y+ + P + M+S G +L
Sbjct: 161 MIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML 220
Query: 243 LDLLSGKH--------------------------------IPPSHALDLIRDRNIQTLTD 270
++ K I + I R+ + +
Sbjct: 221 ASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWE 280
Query: 271 SCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSL 306
+ + E + + L+Y+ + R R
Sbjct: 281 RFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA 316
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 70.8 bits (172), Expect = 5e-14
Identities = 42/299 (14%), Positives = 91/299 (30%), Gaps = 65/299 (21%)
Query: 72 VVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130
V+ K + N +A+K +E + + ++ + +LL
Sbjct: 28 TVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLL 86
Query: 131 VAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKER 176
+ +E + + +++ + L+Y +
Sbjct: 87 DHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG 146
Query: 177 ALYHDLNAYRIVFDDD------VNPRLSCFGLMKNSRDGRSYS-TNLAFTPPEYLRTGRV 229
++ D+ ++ + + +++ G + + S + PE L
Sbjct: 147 IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPW 206
Query: 230 TPESVMYSFGTLLLDLLSGKHI-------------------------PPSHALDLIRD-- 262
+ ++S L+ +L++G + PS+ L +
Sbjct: 207 GCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTR 266
Query: 263 ---------RNIQTLTDSCLEG------QFSSDEGTELVRLASRCLQYEPRERPNPRSL 306
RNI L LE +FS DE E+ S LQ +PR+R + L
Sbjct: 267 TFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGL 325
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 70.4 bits (171), Expect = 9e-14
Identities = 39/294 (13%), Positives = 90/294 (30%), Gaps = 54/294 (18%)
Query: 61 IVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA--WPDARQFLEEARAVGQLRNRRLAN 117
+ G A +V +A+K+ +R A++ E + + ++ + +
Sbjct: 21 NLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIS 80
Query: 118 LLGCCC------EGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYC 171
LL E + LV E M + + + + +++
Sbjct: 81 LLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD-----HERMSYLLYQMLCGIKHL 135
Query: 172 TSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYSTN---LAFTPPEYLRTGR 228
S ++ DL IV D ++ FGL + + + + PE +
Sbjct: 136 HSAGI-IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 194
Query: 229 VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLE-------------- 274
++S G ++ +++ K + P ++ I+ L C E
Sbjct: 195 YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVE 254
Query: 275 ----------------------GQFSSDEGTELVRLASRCLQYEPRERPNPRSL 306
+ + + ++ L S+ L +P +R +
Sbjct: 255 NRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 308
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Score = 46.3 bits (109), Expect = 1e-06
Identities = 20/147 (13%), Positives = 35/147 (23%), Gaps = 25/147 (17%)
Query: 72 VVYKGKLENQFRIAVKRFNRSA----------WPDARQFLEEARAVGQLRNRRLANLLGC 121
V+ E VK F A + R L L G
Sbjct: 15 AVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGL 74
Query: 122 CC----EGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERA 177
+ ++ E + E ++ V I E + +
Sbjct: 75 AVPKVYAWEGNAVLMELI---------DAKELYRVRVENPDEVLDMILEEVAKFYHR-GI 124
Query: 178 LYHDLNAYRIVFDDDVNPRLSCFGLMK 204
++ DL+ Y V + + F
Sbjct: 125 VHGDLSQY-NVLVSEEGIWIIDFPQSV 150
|
| >d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 201 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: STIP1 homology and U box-containing protein 1, STUB1 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 45.0 bits (105), Expect = 5e-06
Identities = 21/92 (22%), Positives = 39/92 (42%), Gaps = 1/92 (1%)
Query: 382 KKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQV 441
K++G+ F + + + CY + I + + R+L YL P++AL D +A
Sbjct: 8 KEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALE 66
Query: 442 ISPVWHMAAYLQAAALFALGKENEAQAALREA 473
+ A + + +EA A L+ A
Sbjct: 67 LDGQSVKAHFFLGQCQLEMESYDEAIANLQRA 98
|
| >d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} Length = 388 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: O-GlcNAc transferase p110 subunit, OGT species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.7 bits (91), Expect = 7e-04
Identities = 17/114 (14%), Positives = 34/114 (29%), Gaps = 1/114 (0%)
Query: 360 YKDDEGAATEMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARR 419
+ A + + V + +I+ Y + I++ P A+
Sbjct: 219 FDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPH-FPDAYCNL 277
Query: 420 SLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREA 473
+ + EA + + A + P + A G EA R+A
Sbjct: 278 ANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKA 331
|
| >d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} Length = 128 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Score = 36.0 bits (82), Expect = 0.002
Identities = 15/98 (15%), Positives = 37/98 (37%), Gaps = 1/98 (1%)
Query: 376 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALND 435
++ L K+ G+ A++ KDF +++ Y + ++ + T ++ Y +
Sbjct: 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELDPT-NMTYITNQAAVYFEKGDYNKCREL 60
Query: 436 ASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREA 473
+A + A A +G + ++A
Sbjct: 61 CEKAIEVGRENREDYRQIAKAYARIGNSYFKEEKYKDA 98
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 484 | |||
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 100.0 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 100.0 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 100.0 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 100.0 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 100.0 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 100.0 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 100.0 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 100.0 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.91 | |
| d1elwa_ | 117 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 99.81 | |
| d2c2la1 | 201 | STIP1 homology and U box-containing protein 1, STU | 99.79 | |
| d1a17a_ | 159 | Protein phosphatase 5 {Human (Homo sapiens) [TaxId | 99.78 | |
| d2fbna1 | 153 | Putative 70 kda peptidylprolyl isomerase PFL2275c | 99.74 | |
| d1p5qa1 | 170 | FKBP52 (FKBP4), C-terminal domain {Human (Homo sap | 99.72 | |
| d1kt1a1 | 168 | FKBP51, C-terminal domain {Monkey (Saimiri bolivie | 99.7 | |
| d1elra_ | 128 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 99.69 | |
| d1ihga1 | 169 | Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | 99.69 | |
| d1hxia_ | 112 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.66 | |
| d1xnfa_ | 259 | Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | 99.63 | |
| d1hh8a_ | 192 | Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {H | 99.61 | |
| d1nzna_ | 122 | Mitochondria fission protein Fis1 {Human (Homo sap | 99.56 | |
| d1hh8a_ | 192 | Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {H | 99.56 | |
| d2hr2a1 | 156 | Hypothetical protein CT2138 {Chlorobium tepidum [T | 99.55 | |
| d1zu2a1 | 145 | Mitochondrial import receptor subunit tom20-3 {Tha | 99.5 | |
| d2h6fa1 | 315 | Protein farnesyltransferase alpha-subunit {Human ( | 99.5 | |
| d1fcha_ | 323 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.48 | |
| d2h6fa1 | 315 | Protein farnesyltransferase alpha-subunit {Human ( | 99.46 | |
| d1fcha_ | 323 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.39 | |
| d1tjca_ | 95 | Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human | 99.36 | |
| d1w3ba_ | 388 | O-GlcNAc transferase p110 subunit, OGT {Human (Hom | 99.34 | |
| d1w3ba_ | 388 | O-GlcNAc transferase p110 subunit, OGT {Human (Hom | 99.33 | |
| d1elwa_ | 117 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 99.33 | |
| d1ihga1 | 169 | Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | 99.26 | |
| d1xnfa_ | 259 | Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | 99.26 | |
| d1a17a_ | 159 | Protein phosphatase 5 {Human (Homo sapiens) [TaxId | 99.25 | |
| d2ff4a2 | 179 | Probable regulatory protein EmbR, middle domain {M | 99.22 | |
| d1p5qa1 | 170 | FKBP52 (FKBP4), C-terminal domain {Human (Homo sap | 99.22 | |
| d1kt1a1 | 168 | FKBP51, C-terminal domain {Monkey (Saimiri bolivie | 99.2 | |
| d2fbna1 | 153 | Putative 70 kda peptidylprolyl isomerase PFL2275c | 99.16 | |
| d1zu2a1 | 145 | Mitochondrial import receptor subunit tom20-3 {Tha | 99.1 | |
| d2c2la1 | 201 | STIP1 homology and U box-containing protein 1, STU | 99.05 | |
| d1elra_ | 128 | Hop {Human (Homo sapiens) [TaxId: 9606]} | 99.02 | |
| d1hxia_ | 112 | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1 | 99.02 | |
| d1nzna_ | 122 | Mitochondria fission protein Fis1 {Human (Homo sap | 99.0 | |
| d1tjca_ | 95 | Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human | 99.0 | |
| d1ya0a1 | 497 | SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | 98.81 | |
| d1qqea_ | 290 | Vesicular transport protein sec17 {Baker's yeast ( | 98.76 | |
| d1dcea1 | 334 | Rab geranylgeranyltransferase alpha-subunit, N-ter | 98.75 | |
| d1zbpa1 | 264 | Hypothetical protein VPA1032 {Vibrio parahaemolyti | 98.68 | |
| d1dcea1 | 334 | Rab geranylgeranyltransferase alpha-subunit, N-ter | 98.64 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 98.62 | |
| d1qqea_ | 290 | Vesicular transport protein sec17 {Baker's yeast ( | 98.62 | |
| d1hz4a_ | 366 | Transcription factor MalT domain III {Escherichia | 98.54 | |
| d1ya0a1 | 497 | SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | 98.43 | |
| d1hz4a_ | 366 | Transcription factor MalT domain III {Escherichia | 98.42 | |
| d2hr2a1 | 156 | Hypothetical protein CT2138 {Chlorobium tepidum [T | 98.39 | |
| d1zbpa1 | 264 | Hypothetical protein VPA1032 {Vibrio parahaemolyti | 98.36 | |
| d2pqrb1 | 124 | Mitochondria fission protein Fis1 {Baker's yeast ( | 98.26 | |
| d2pqrb1 | 124 | Mitochondria fission protein Fis1 {Baker's yeast ( | 98.25 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 98.17 | |
| d2onda1 | 308 | Cleavage stimulation factor 77 kDa subunit CSTF3 { | 98.09 | |
| d2onda1 | 308 | Cleavage stimulation factor 77 kDa subunit CSTF3 { | 97.93 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 97.93 | |
| d2ff4a2 | 179 | Probable regulatory protein EmbR, middle domain {M | 97.89 | |
| d1klxa_ | 133 | Cysteine rich protein B (HcpB) {Helicobacter pylor | 97.88 | |
| d1ouva_ | 265 | Cysteine rich protein C (HcpC) {Helicobacter pylor | 97.82 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 97.61 | |
| d1ouva_ | 265 | Cysteine rich protein C (HcpC) {Helicobacter pylor | 97.45 | |
| d1klxa_ | 133 | Cysteine rich protein B (HcpB) {Helicobacter pylor | 97.19 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 97.05 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 96.96 | |
| d2crba1 | 83 | Nuclear receptor binding factor 2, NRBF2, N-termin | 90.83 | |
| d1qsaa1 | 450 | 70 KDa soluble lytic transglycosylase (SLT70), sup | 82.95 | |
| d1wfda_ | 93 | Hypothetical protein 1500032H18Rik {Mouse (Mus mus | 82.51 |
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.2e-57 Score=429.17 Aligned_cols=246 Identities=17% Similarity=0.243 Sum_probs=211.4
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCC
Q 011519 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~ 136 (484)
+|+++++||+|+||+||+|. ..+|+.||||+++.......+.+.+|+.+|++++|||||++++++.+.+..|||||||+
T Consensus 21 ~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~~ 100 (293)
T d1yhwa1 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLA 100 (293)
T ss_dssp TBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred ccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEecC
Confidence 68999999999999999999 56799999999976655567789999999999999999999999999999999999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----Ccc
Q 011519 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----RSY 212 (484)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~----~~~ 212 (484)
||+|.+++.+ +.+++.++..++.||+.||.|||++ |||||||||+|||++.++.+||+|||+++..... ...
T Consensus 101 gg~L~~~~~~---~~l~~~~~~~i~~qi~~aL~yLH~~-~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~ 176 (293)
T d1yhwa1 101 GGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSN-QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM 176 (293)
T ss_dssp TCBHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCCC
T ss_pred CCcHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHC-CCcccCCcHHHeEECCCCcEeeccchhheeecccccccccc
Confidence 9999998853 4699999999999999999999999 9999999999999999999999999999875432 355
Q ss_pred cCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHH
Q 011519 213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRC 292 (484)
Q Consensus 213 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 292 (484)
.||+.|+|||++.+..++.++|||||||++|+|+||+.||............... .......+..+++++.+||.+|
T Consensus 177 ~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~---~~~~~~~~~~~s~~~~~li~~~ 253 (293)
T d1yhwa1 177 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN---GTPELQNPEKLSAIFRDFLNRC 253 (293)
T ss_dssp CSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHH---CSCCCSSGGGSCHHHHHHHHHH
T ss_pred ccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHhC---CCCCCCCcccCCHHHHHHHHHH
Confidence 7999999999999999999999999999999999999998654322111111111 1111233456778999999999
Q ss_pred hccCCCCCCChHHHHHHH
Q 011519 293 LQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 293 l~~dp~~Rps~~~il~~l 310 (484)
|+.||.+|||+.|+++|-
T Consensus 254 L~~dP~~R~s~~eil~Hp 271 (293)
T d1yhwa1 254 LDMDVEKRGSAKELLQHQ 271 (293)
T ss_dssp TCSSTTTSCCHHHHTTCG
T ss_pred ccCChhHCcCHHHHhcCH
Confidence 999999999999999874
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.5e-57 Score=423.92 Aligned_cols=251 Identities=22% Similarity=0.328 Sum_probs=205.3
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCC
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~ 136 (484)
++|++++.||+|+||+||+|.+.+++.||||+++... ...++|.+|+.++++++|||||+++|++...+..+|||||++
T Consensus 5 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~ 83 (263)
T d1sm2a_ 5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME 83 (263)
T ss_dssp SCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred HHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCCc-CcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecC
Confidence 5678889999999999999998888899999997654 345789999999999999999999999999999999999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-----Cc
Q 011519 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----RS 211 (484)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~-----~~ 211 (484)
+|+|.+++.. ....+++..++.|+.||+.||.|||+. +|+||||||+|||++.++.+||+|||+++..... ..
T Consensus 84 ~g~L~~~l~~-~~~~~~~~~~~~i~~qia~gl~~lH~~-~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~ 161 (263)
T d1sm2a_ 84 HGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEA-CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTG 161 (263)
T ss_dssp TCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHT-TCCCTTCSGGGEEECGGGCEEECSCC---------------
T ss_pred CCcHHHHhhc-cccCCCHHHHHHHHHHHHHHHHhhhcc-ceeecccchhheeecCCCCeEecccchheeccCCCceeecc
Confidence 9999999864 345689999999999999999999999 9999999999999999999999999999865432 23
Q ss_pred ccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCch-hhHHhhhccccccccccccCCCChHHHHHHHHHHH
Q 011519 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSH-ALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (484)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (484)
..||+.|+|||++.+..++.++|||||||++|||+|++.||... ........ +....+...|..+++++.+|+.
T Consensus 162 ~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~-----i~~~~~~~~p~~~~~~l~~li~ 236 (263)
T d1sm2a_ 162 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED-----ISTGFRLYKPRLASTHVYQIMN 236 (263)
T ss_dssp ---CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHH-----HHHTCCCCCCTTSCHHHHHHHH
T ss_pred eecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHH-----HHhcCCCCCccccCHHHHHHHH
Confidence 56789999999999999999999999999999999965554432 21111111 1111222345556789999999
Q ss_pred HHhccCCCCCCChHHHHHHHHhhhc
Q 011519 291 RCLQYEPRERPNPRSLVTALVTLQK 315 (484)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~l~~~~~ 315 (484)
+||+.||++|||+++|+++|+.+.+
T Consensus 237 ~cl~~~p~~Rps~~~il~~L~~i~e 261 (263)
T d1sm2a_ 237 HCWKERPEDRPAFSRLLRQLAEIAE 261 (263)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHccCCHhHCcCHHHHHHHHHHHHh
Confidence 9999999999999999999998764
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=3e-57 Score=429.19 Aligned_cols=254 Identities=21% Similarity=0.331 Sum_probs=216.6
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEec
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey 134 (484)
++++++.+.||+|+||+||+|++ .+++.||||+++... ...++|.+|+.+|++++|||||++++++.+++..+|||||
T Consensus 16 ~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~-~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~ 94 (287)
T d1opja_ 16 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 94 (287)
T ss_dssp GGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred HHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCcc-chHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEeec
Confidence 35678889999999999999995 468899999997654 3467899999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCC----
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGR---- 210 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~---- 210 (484)
|++|+|.+++.......+++..+..|+.||+.||.|||++ |||||||||+|||++.++++||+|||+++......
T Consensus 95 ~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~-~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~~ 173 (287)
T d1opja_ 95 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK-NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 173 (287)
T ss_dssp CTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSSEEE
T ss_pred ccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHC-CcccCccccCeEEECCCCcEEEccccceeecCCCCceee
Confidence 9999999999766667899999999999999999999999 99999999999999999999999999998765432
Q ss_pred -cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchh-hHHhhhccccccccccccCCCChHHHHHHHHH
Q 011519 211 -SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHA-LDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288 (484)
Q Consensus 211 -~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 288 (484)
...||+.|+|||++.+..++.++|||||||++|||+||+.||.... ..... ...........+..+++++.+|
T Consensus 174 ~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~-----~~i~~~~~~~~~~~~~~~l~~l 248 (287)
T d1opja_ 174 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-----ELLEKDYRMERPEGCPEKVYEL 248 (287)
T ss_dssp TTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHH-----HHHHTTCCCCCCTTCCHHHHHH
T ss_pred ccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHH-----HHHhcCCCCCCCccchHHHHHH
Confidence 2346889999999999999999999999999999999877664321 11111 1111222334556677899999
Q ss_pred HHHHhccCCCCCCChHHHHHHHHhhhcC
Q 011519 289 ASRCLQYEPRERPNPRSLVTALVTLQKD 316 (484)
Q Consensus 289 i~~cl~~dp~~Rps~~~il~~l~~~~~~ 316 (484)
+.+||+.||++|||+.+|++.|+.+...
T Consensus 249 i~~cl~~dP~~Rps~~ei~~~L~~~~~~ 276 (287)
T d1opja_ 249 MRACWQWNPSDRPSFAEIHQAFETMFQE 276 (287)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHTTSS
T ss_pred HHHHcCCCHhHCcCHHHHHHHHHHHHHh
Confidence 9999999999999999999999887654
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-57 Score=424.63 Aligned_cols=246 Identities=21% Similarity=0.282 Sum_probs=212.1
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCC---CccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 132 (484)
++|++++.||+|+||+||+|+. .+++.||||++.... ....+.+.+|+.++++++|||||++++++.+.+..+|||
T Consensus 6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivm 85 (263)
T d2j4za1 6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL 85 (263)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEE
Confidence 4688999999999999999995 578999999986432 223567899999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC--C
Q 011519 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--R 210 (484)
Q Consensus 133 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~--~ 210 (484)
|||++|+|.+++. ..+.+++..+..++.||+.||.|||++ |||||||||+|||++.++.+||+|||+++..... .
T Consensus 86 Ey~~~g~L~~~l~--~~~~l~e~~~~~i~~qi~~al~~lH~~-~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~~~~ 162 (263)
T d2j4za1 86 EYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCHSK-RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT 162 (263)
T ss_dssp ECCTTCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCCCCE
T ss_pred eecCCCcHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHHC-CeeeeeeccccceecCCCCEeecccceeeecCCCccc
Confidence 9999999999997 345799999999999999999999999 9999999999999999999999999999876543 3
Q ss_pred cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHH
Q 011519 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (484)
Q Consensus 211 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (484)
...||+.|+|||++.+..++.++|||||||++|||+||+.||.............. ....+|...++++.+|+.
T Consensus 163 ~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~------~~~~~p~~~s~~~~~li~ 236 (263)
T d2j4za1 163 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR------VEFTFPDFVTEGARDLIS 236 (263)
T ss_dssp ETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHT------TCCCCCTTSCHHHHHHHH
T ss_pred ccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHHc------CCCCCCccCCHHHHHHHH
Confidence 56789999999999999999999999999999999999999876543322221111 112345567789999999
Q ss_pred HHhccCCCCCCChHHHHHHHH
Q 011519 291 RCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~l~ 311 (484)
+||+.||++|||++++++|-+
T Consensus 237 ~~L~~dp~~R~t~~eil~hp~ 257 (263)
T d2j4za1 237 RLLKHNPSQRPMLREVLEHPW 257 (263)
T ss_dssp HHTCSSGGGSCCHHHHHTCHH
T ss_pred HHccCCHhHCcCHHHHHcCcC
Confidence 999999999999999998744
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.5e-57 Score=424.71 Aligned_cols=255 Identities=20% Similarity=0.290 Sum_probs=205.9
Q ss_pred CCcccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCC--ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEe
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 133 (484)
+++|.+++.||+|+||+||+|++.+ .||||+++.... ...+.|.+|+.+|++++|||||++++++.+ +..+||||
T Consensus 7 ~~~~~~~~~lG~G~fg~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~-~~~~lv~E 83 (276)
T d1uwha_ 7 DGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLAIVTQ 83 (276)
T ss_dssp TTCCCCCSEEEECSSCEEEEEESSS--EEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred cccEEEEEEEeeCCCcEEEEEEECC--EEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEec-cEEEEEEe
Confidence 4577888999999999999998643 599999975432 346789999999999999999999998754 56899999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----
Q 011519 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 209 (484)
Q Consensus 134 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~---- 209 (484)
||+||+|.+++.. .+..+++..+..|+.||+.||.|||++ +||||||||+|||++.++.+||+|||+++.....
T Consensus 84 y~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~gl~yLH~~-~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~~ 161 (276)
T d1uwha_ 84 WCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGMDYLHAK-SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSH 161 (276)
T ss_dssp CCCEEEHHHHHHT-SCCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEEETTSSEEECCCCCSCC--------
T ss_pred cCCCCCHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHhcC-CEeccccCHHHEEEcCCCCEEEccccceeeccccCCcc
Confidence 9999999999964 345699999999999999999999999 9999999999999999999999999999765432
Q ss_pred --CcccCCCCCCCcccccCC---CCCCCCceeehHHHHHHHhhCCCCCCchhhH-HhhhccccccccccccCCCChHHHH
Q 011519 210 --RSYSTNLAFTPPEYLRTG---RVTPESVMYSFGTLLLDLLSGKHIPPSHALD-LIRDRNIQTLTDSCLEGQFSSDEGT 283 (484)
Q Consensus 210 --~~~~~t~~y~aPE~~~~~---~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (484)
....||+.|||||++.+. .++.++|||||||++|||+||+.||...... ............+. ....+..+++
T Consensus 162 ~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~ 240 (276)
T d1uwha_ 162 QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPD-LSKVRSNCPK 240 (276)
T ss_dssp ----CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCC-GGGSCTTCCH
T ss_pred cccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCc-chhccccchH
Confidence 345789999999999753 4789999999999999999999998653211 11111111111111 1123455678
Q ss_pred HHHHHHHHHhccCCCCCCChHHHHHHHHhhhcC
Q 011519 284 ELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316 (484)
Q Consensus 284 ~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 316 (484)
++.+|+.+||+.||++|||+.+|+++|+.+.+.
T Consensus 241 ~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~~ 273 (276)
T d1uwha_ 241 AMKRLMAECLKKKRDERPLFPQILASIELLARS 273 (276)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHc
Confidence 999999999999999999999999999998764
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=3.5e-57 Score=431.28 Aligned_cols=266 Identities=20% Similarity=0.288 Sum_probs=210.2
Q ss_pred cCHHHHHHHhcCC------CcccccccCCCCCCceEEEEEeC-CC---cEEEEEEecCCCCc-cHHHHHHHHHHHhcCCC
Q 011519 44 YSIETLRTATSGF------AMENIVSEHGEKAPNVVYKGKLE-NQ---FRIAVKRFNRSAWP-DARQFLEEARAVGQLRN 112 (484)
Q Consensus 44 ~~~~~~~~~~~~f------~~~~~~~~lG~G~~g~Vy~~~~~-~~---~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h 112 (484)
++++++..++.+| +.+++.+.||+|+||+||+|.+. ++ ..||||.+...... ..+.|.+|+.+|++++|
T Consensus 7 ~t~~d~~~a~~~f~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H 86 (299)
T d1jpaa_ 7 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDH 86 (299)
T ss_dssp GGSSSHHHHHHHHSCBCCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCC
T ss_pred CCHHHHHHHHhhhchhhChhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCC
Confidence 4556666666555 45667788999999999999953 33 35899998765433 35679999999999999
Q ss_pred CceeeeeeeeeeCCceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCC
Q 011519 113 RRLANLLGCCCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 192 (484)
Q Consensus 113 pniv~l~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~ 192 (484)
||||+++|++.+.+..+||||||++|+|.+++.. ..+.+++.+++.|+.||+.||.|||++ +||||||||+||||+.+
T Consensus 87 pnIv~l~g~~~~~~~~~iv~Ey~~~g~L~~~~~~-~~~~l~~~~~~~i~~qia~gl~yLH~~-~iiHrDlKp~NILl~~~ 164 (299)
T d1jpaa_ 87 PNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQ-NDGQFTVIQLVGMLRGIAAGMKYLADM-NYVHRDLAARNILVNSN 164 (299)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTT
T ss_pred CCCccEEEEEeeCCEEEEEEEecCCCcceeeecc-ccCCCCHHHHHHHHHHHHHHHHHHhhC-CCccCccccceEEECCC
Confidence 9999999999999999999999999999998864 345799999999999999999999998 99999999999999999
Q ss_pred CCceeeccCCccccCCCC---------cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhh
Q 011519 193 VNPRLSCFGLMKNSRDGR---------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRD 262 (484)
Q Consensus 193 ~~~kl~DfG~a~~~~~~~---------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~ 262 (484)
+++||+|||+++...... ...+|+.|+|||.+.++.++.++|||||||++|||+| |+.||.......+..
T Consensus 165 ~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~ 244 (299)
T d1jpaa_ 165 LVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVIN 244 (299)
T ss_dssp CCEEECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH
T ss_pred CcEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 999999999998754321 2346889999999999999999999999999999998 787776543322221
Q ss_pred ccccccccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhcC
Q 011519 263 RNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316 (484)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 316 (484)
... ...+...+..++..+.+|+.+||+.||++|||+.+|++.|+.+.++
T Consensus 245 ~i~-----~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~~ 293 (299)
T d1jpaa_ 245 AIE-----QDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRN 293 (299)
T ss_dssp HHH-----TTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred HHH-----cCCCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcC
Confidence 111 1112234556778999999999999999999999999999987664
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.9e-57 Score=424.90 Aligned_cols=248 Identities=17% Similarity=0.127 Sum_probs=204.6
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEec
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey 134 (484)
++|++++.||+|+||+||+|+. .+|+.||||+++..... ..+.+.+|+.+|++++|||||++++++.+.+..||||||
T Consensus 5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy 84 (271)
T d1nvra_ 5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 84 (271)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEec
Confidence 4688999999999999999995 57999999999765432 345689999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC------
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD------ 208 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~------ 208 (484)
|+||+|.++|. ..+.+++.++..++.||+.||.|||++ ||+||||||+|||+++++.+||+|||+++....
T Consensus 85 ~~gg~L~~~l~--~~~~l~e~~~~~i~~qi~~al~ylH~~-~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~~ 161 (271)
T d1nvra_ 85 CSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGI-GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 161 (271)
T ss_dssp CTTEEGGGGSB--TTTBCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECTTCCEEECCCTTCEECEETTEECC
T ss_pred cCCCcHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHc-CCccCcccHHHEEECCCCCEEEccchhheeeccCCcccc
Confidence 99999999996 456799999999999999999999999 999999999999999999999999999986532
Q ss_pred CCcccCCCCCCCcccccCCCC-CCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHH
Q 011519 209 GRSYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287 (484)
Q Consensus 209 ~~~~~~t~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (484)
.....||+.|||||++.+..+ +.++|||||||++|||+||+.||............ ..............++++.+
T Consensus 162 ~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~---~~~~~~~~~~~~~~s~~~~~ 238 (271)
T d1nvra_ 162 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD---WKEKKTYLNPWKKIDSAPLA 238 (271)
T ss_dssp BCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHH---HHTTCTTSTTGGGSCHHHHH
T ss_pred ccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHH---HhcCCCCCCccccCCHHHHH
Confidence 235679999999999988776 57899999999999999999988643211110000 00111111122455788999
Q ss_pred HHHHHhccCCCCCCChHHHHHHH
Q 011519 288 LASRCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 288 li~~cl~~dp~~Rps~~~il~~l 310 (484)
|+.+||+.||++|||++++++|-
T Consensus 239 li~~~L~~dP~~R~t~~eil~hp 261 (271)
T d1nvra_ 239 LLHKILVENPSARITIPDIKKDR 261 (271)
T ss_dssp HHHHHSCSSTTTSCCHHHHTTCT
T ss_pred HHHHHcCCChhHCcCHHHHhcCH
Confidence 99999999999999999998874
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.7e-57 Score=426.46 Aligned_cols=248 Identities=16% Similarity=0.195 Sum_probs=209.6
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCC
Q 011519 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~ 136 (484)
.|++++.||+|+||+||+|.. .+++.||||+++.......+.|.+|+++|++++|||||++++++.+.+..+||||||+
T Consensus 13 ~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~~ 92 (288)
T d2jfla1 13 FWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCA 92 (288)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred CeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecCC
Confidence 478899999999999999994 5789999999987666667789999999999999999999999999999999999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC----CCcc
Q 011519 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD----GRSY 212 (484)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~----~~~~ 212 (484)
||+|.+++.+ ..+++++.++..++.||+.||.|||++ |||||||||+|||++.++++||+|||+++.... ....
T Consensus 93 ~g~L~~~~~~-~~~~l~e~~~~~i~~qi~~gL~ylH~~-~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~~~~~~ 170 (288)
T d2jfla1 93 GGAVDAVMLE-LERPLTESQIQVVCKQTLDALNYLHDN-KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSF 170 (288)
T ss_dssp TEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECHHHHHHHTCC
T ss_pred CCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CEEEeecChhheeECCCCCEEEEechhhhccCCCccccccc
Confidence 9999999864 345699999999999999999999999 999999999999999999999999999876533 2457
Q ss_pred cCCCCCCCccccc-----CCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHH
Q 011519 213 STNLAFTPPEYLR-----TGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287 (484)
Q Consensus 213 ~~t~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (484)
.||+.|+|||++. +..++.++|||||||++|||+||+.||................ ......+...++++.+
T Consensus 171 ~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~~~---~~~~~~~~~~s~~~~~ 247 (288)
T d2jfla1 171 IGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSE---PPTLAQPSRWSSNFKD 247 (288)
T ss_dssp CSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHHSC---CCCCSSGGGSCHHHHH
T ss_pred ccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCC---CCCCCccccCCHHHHH
Confidence 8999999999984 3458899999999999999999999886542221111111110 1111234566789999
Q ss_pred HHHHHhccCCCCCCChHHHHHHH
Q 011519 288 LASRCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 288 li~~cl~~dp~~Rps~~~il~~l 310 (484)
||.+||+.||++|||+.|+++|-
T Consensus 248 li~~~L~~dp~~R~t~~ell~hp 270 (288)
T d2jfla1 248 FLKKCLEKNVDARWTTSQLLQHP 270 (288)
T ss_dssp HHHHHSCSSTTTSCCHHHHTTSG
T ss_pred HHHHHccCChhHCcCHHHHhcCc
Confidence 99999999999999999998873
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.8e-57 Score=423.47 Aligned_cols=251 Identities=23% Similarity=0.336 Sum_probs=210.6
Q ss_pred CCcccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecC
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~ 135 (484)
+++|++++.||+|+||+||+|.+.+++.||||+++... ...+.|.+|+.+|++++|||||+++|++.+ +..+|||||+
T Consensus 12 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-~~~~iv~Ey~ 89 (272)
T d1qpca_ 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYM 89 (272)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECC
T ss_pred HHHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCc-CCHHHHHHHHHHHHhCCCCCEeEEEeeecc-CCeEEEEEeC
Confidence 35778889999999999999998888899999997654 345789999999999999999999998754 5679999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-----C
Q 011519 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----R 210 (484)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~-----~ 210 (484)
++|+|.+++....+..+++..++.|+.||+.||.|||+. +|+||||||+||||++++.+||+|||+++..... .
T Consensus 90 ~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~-~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~~~~ 168 (272)
T d1qpca_ 90 ENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER-NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE 168 (272)
T ss_dssp TTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCT
T ss_pred CCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-CcccCccchhheeeecccceeeccccceEEccCCcccccc
Confidence 999999988654445699999999999999999999998 9999999999999999999999999999876543 3
Q ss_pred cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchh-hHHhhhccccccccccccCCCChHHHHHHHHHH
Q 011519 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHA-LDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289 (484)
Q Consensus 211 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 289 (484)
...||+.|+|||++.++.++.++|||||||++|||+||+.|+.... ....... +....+...+..+++++.+|+
T Consensus 169 ~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~-----i~~~~~~~~p~~~~~~l~~li 243 (272)
T d1qpca_ 169 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN-----LERGYRMVRPDNCPEELYQLM 243 (272)
T ss_dssp TCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHH-----HHTTCCCCCCTTCCHHHHHHH
T ss_pred ccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHH-----HHhcCCCCCcccChHHHHHHH
Confidence 4567899999999998899999999999999999999766654322 1111111 111122234556678899999
Q ss_pred HHHhccCCCCCCChHHHHHHHHhhh
Q 011519 290 SRCLQYEPRERPNPRSLVTALVTLQ 314 (484)
Q Consensus 290 ~~cl~~dp~~Rps~~~il~~l~~~~ 314 (484)
.+||+.||++|||+.+|++.|+.+-
T Consensus 244 ~~cl~~~P~~Rpt~~ei~~~L~~~f 268 (272)
T d1qpca_ 244 RLCWKERPEDRPTFDYLRSVLEDFF 268 (272)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHcCCCHhHCcCHHHHHHHhhhhh
Confidence 9999999999999999999988653
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.4e-57 Score=421.47 Aligned_cols=248 Identities=17% Similarity=0.223 Sum_probs=199.2
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCcc--HHHHHHHHHHHhcCCCCceeeeeeeeee--CCceEEE
Q 011519 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD--ARQFLEEARAVGQLRNRRLANLLGCCCE--GDERLLV 131 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~hpniv~l~~~~~~--~~~~~lv 131 (484)
++|++++.||+|+||+||+|+ ..+|+.||||+++...... .+.+.+|+.+|++++|||||++++++.+ .+.+|||
T Consensus 4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~iv 83 (269)
T d2java1 4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV 83 (269)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEE
T ss_pred hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEE
Confidence 578899999999999999999 4678999999997664332 4568999999999999999999999864 4568999
Q ss_pred EecCCCCCHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhcCC----CcccccccccceeecCCCCceeeccCCccc
Q 011519 132 AEYMPNDTLAKHLFHW--ETQPMKWAMRLRVALHIAEALEYCTSKE----RALYHDLNAYRIVFDDDVNPRLSCFGLMKN 205 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~--~~~~l~~~~~~~i~~qi~~~L~~lH~~~----~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~ 205 (484)
||||+||+|.+++.+. .+..+++..++.++.||+.||.|||++. +||||||||+|||++.++.+||+|||+++.
T Consensus 84 mEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~ 163 (269)
T d2java1 84 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI 163 (269)
T ss_dssp EECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHH
T ss_pred EecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceee
Confidence 9999999999998632 3467999999999999999999999861 399999999999999999999999999987
Q ss_pred cCCC----CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHH
Q 011519 206 SRDG----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 281 (484)
Q Consensus 206 ~~~~----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (484)
.... ....||+.|+|||++.+..++.++|||||||++|||+||+.||............... ....++..+
T Consensus 164 ~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~~-----~~~~~~~~~ 238 (269)
T d2java1 164 LNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREG-----KFRRIPYRY 238 (269)
T ss_dssp C-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHT-----CCCCCCTTS
T ss_pred cccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHHcC-----CCCCCCccc
Confidence 6443 3567899999999999999999999999999999999999998765433322211111 112345566
Q ss_pred HHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 282 GTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 282 ~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
++++.+|+.+||+.||.+|||+.++++|
T Consensus 239 s~~l~~li~~~L~~dp~~Rps~~ell~h 266 (269)
T d2java1 239 SDELNEIITRMLNLKDYHRPSVEEILEN 266 (269)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 7899999999999999999999999886
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=6.3e-56 Score=423.74 Aligned_cols=246 Identities=19% Similarity=0.209 Sum_probs=209.5
Q ss_pred ccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCcc---HHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEec
Q 011519 59 ENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD---ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (484)
Q Consensus 59 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey 134 (484)
|+++++||+|+||+||+|+ ..+++.||||+++...... .+.+.+|+.+|++++|||||++++++.+.+..+|||||
T Consensus 17 y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~E~ 96 (309)
T d1u5ra_ 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY 96 (309)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEEEe
Confidence 7889999999999999999 5678999999997654332 45689999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCCCcccC
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDGRSYST 214 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 214 (484)
|++|+|..++. .++++++.+++.++.||+.||.|||++ |||||||||+|||++.++.+||+|||+++.........|
T Consensus 97 ~~~g~l~~~~~--~~~~l~e~~~~~i~~qi~~aL~yLH~~-~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~G 173 (309)
T d1u5ra_ 97 CLGSASDLLEV--HKKPLQEVEIAAVTHGALQGLAYLHSH-NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVG 173 (309)
T ss_dssp CSEEHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCCS
T ss_pred cCCCchHHHHH--hCCCCCHHHHHHHHHHHHHHHHHHHhC-CEeccCCCcceEEECCCCCEEEeecccccccCCCCcccc
Confidence 99999987765 346799999999999999999999999 999999999999999999999999999998888888899
Q ss_pred CCCCCCcccccC---CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHH
Q 011519 215 NLAFTPPEYLRT---GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291 (484)
Q Consensus 215 t~~y~aPE~~~~---~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 291 (484)
|+.|+|||++.+ +.++.++|||||||++|||++|..||............... ......+...++.+.+||.+
T Consensus 174 T~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~~----~~~~~~~~~~s~~~~~li~~ 249 (309)
T d1u5ra_ 174 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN----ESPALQSGHWSEYFRNFVDS 249 (309)
T ss_dssp CGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS----CCCCCSCTTSCHHHHHHHHH
T ss_pred CccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhC----CCCCCCCCCCCHHHHHHHHH
Confidence 999999999864 45899999999999999999999988654322211111111 11111234457889999999
Q ss_pred HhccCCCCCCChHHHHHHHH
Q 011519 292 CLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 292 cl~~dp~~Rps~~~il~~l~ 311 (484)
||+.||.+|||+.++++|-+
T Consensus 250 ~L~~dP~~Rpt~~ell~Hp~ 269 (309)
T d1u5ra_ 250 CLQKIPQDRPTSEVLLKHRF 269 (309)
T ss_dssp HTCSSGGGSCCHHHHTTCHH
T ss_pred HCcCChhHCcCHHHHHhCHH
Confidence 99999999999999998754
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.8e-56 Score=430.08 Aligned_cols=252 Identities=18% Similarity=0.234 Sum_probs=205.7
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEec
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey 134 (484)
++|++++.||+|+||+||+|+. .+|+.||||+++..... ...++.+|+.+|++++|||||+++++|.+.++.+|||||
T Consensus 6 d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmEy 85 (322)
T d1s9ja_ 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 85 (322)
T ss_dssp GGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred cCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 3678899999999999999994 67899999999765333 356799999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC--CCcc
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD--GRSY 212 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~--~~~~ 212 (484)
++||+|.+++.+ .+.+++..+..++.||+.||.|||++.||+||||||+|||++.+|++||+|||+|+.... ..+.
T Consensus 86 ~~gg~L~~~l~~--~~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~~ 163 (322)
T d1s9ja_ 86 MDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 163 (322)
T ss_dssp CTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHTC---
T ss_pred CCCCcHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeECCCCCEEEeeCCCccccCCCccccc
Confidence 999999999973 456999999999999999999999743899999999999999999999999999986533 3567
Q ss_pred cCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccc-------------------------
Q 011519 213 STNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQT------------------------- 267 (484)
Q Consensus 213 ~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~------------------------- 267 (484)
.||+.|+|||++.+..++.++|||||||++|||+||+.||...............
T Consensus 164 ~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (322)
T d1s9ja_ 164 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMD 243 (322)
T ss_dssp CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC----------------------------
T ss_pred cCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCcccccccccccccccc
Confidence 8999999999999999999999999999999999999998653211110000000
Q ss_pred ---------cccc---cccCCCC-hHHHHHHHHHHHHHhccCCCCCCChHHHHHHH
Q 011519 268 ---------LTDS---CLEGQFS-SDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 268 ---------~~~~---~~~~~~~-~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 310 (484)
.... ......+ ...+.++.+|+.+||..||.+|||++++++|-
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~Hp 299 (322)
T d1s9ja_ 244 SRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHA 299 (322)
T ss_dssp --CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred cccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCH
Confidence 0000 0000111 22467899999999999999999999999983
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.2e-55 Score=408.49 Aligned_cols=248 Identities=23% Similarity=0.353 Sum_probs=212.7
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCC
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMP 136 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~ 136 (484)
+++++++.||+|+||+||+|++++++.||||+++.... ..+.|.+|+.++++++|||||+++|++.+.+.+++||||++
T Consensus 4 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~-~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~ 82 (258)
T d1k2pa_ 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMA 82 (258)
T ss_dssp CCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSSS-CHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCT
T ss_pred HHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCcC-CHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccC
Confidence 56688899999999999999998888999999986543 45689999999999999999999999999999999999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-----Cc
Q 011519 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----RS 211 (484)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~-----~~ 211 (484)
+|+|..++.. ....+++..+++++.||++||.|||+. ||+||||||+|||+++++.+||+|||+++..... ..
T Consensus 83 ~g~l~~~~~~-~~~~~~~~~~~~i~~qi~~gl~~LH~~-~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~ 160 (258)
T d1k2pa_ 83 NGCLLNYLRE-MRHRFQTQQLLEMCKDVCEAMEYLESK-QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 160 (258)
T ss_dssp TEEHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHHHHT-TBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCCCCCC
T ss_pred CCcHHHhhhc-cccCCcHHHHHHHHHHHHHHHHHHhhc-CcccccccceeEEEcCCCcEEECcchhheeccCCCceeecc
Confidence 9999999754 345689999999999999999999999 9999999999999999999999999999865432 23
Q ss_pred ccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHH
Q 011519 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (484)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (484)
..+|+.|+|||.+.+..++.++|||||||++|||+| |+.||.......+..... ...+...|...++.+.+|+.
T Consensus 161 ~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~-----~~~~~~~p~~~~~~l~~li~ 235 (258)
T d1k2pa_ 161 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA-----QGLRLYRPHLASEKVYTIMY 235 (258)
T ss_dssp SCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHH-----TTCCCCCCTTCCHHHHHHHH
T ss_pred cCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHH-----hCCCCCCcccccHHHHHHHH
Confidence 567889999999999999999999999999999998 787776544333322111 11222345566789999999
Q ss_pred HHhccCCCCCCChHHHHHHHHh
Q 011519 291 RCLQYEPRERPNPRSLVTALVT 312 (484)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~l~~ 312 (484)
+||+.||++|||+++|+++|..
T Consensus 236 ~cl~~dP~~RPt~~eil~~L~d 257 (258)
T d1k2pa_ 236 SCWHEKADERPTFKILLSNILD 257 (258)
T ss_dssp HTTCSSGGGSCCHHHHHHHHHC
T ss_pred HHccCCHhHCcCHHHHHHHhhC
Confidence 9999999999999999999864
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.4e-55 Score=421.31 Aligned_cols=248 Identities=15% Similarity=0.169 Sum_probs=195.5
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecC
Q 011519 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~ 135 (484)
.|++++.||+|+||+||+|+. .+++.||||++...... ....+.+|+.+|++++|||||++++++.+++..|||||||
T Consensus 10 ~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE~~ 89 (307)
T d1a06a_ 10 IYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLV 89 (307)
T ss_dssp TEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred ceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEecc
Confidence 478899999999999999995 57899999999765433 2456889999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeec---CCCCceeeccCCccccCCC---
Q 011519 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD---DDVNPRLSCFGLMKNSRDG--- 209 (484)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~---~~~~~kl~DfG~a~~~~~~--- 209 (484)
+||+|.++|. ..+.+++.++..++.||+.||.|||++ |||||||||+|||++ .++.+||+|||+++.....
T Consensus 90 ~gg~L~~~l~--~~~~l~e~~~~~~~~qi~~al~ylH~~-~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~~~ 166 (307)
T d1a06a_ 90 SGGELFDRIV--EKGFYTERDASRLIFQVLDAVKYLHDL-GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVL 166 (307)
T ss_dssp CSCBHHHHHH--TCSCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEESSSSTTCCEEECCC------------
T ss_pred CCCcHHHhhh--cccCCCHHHHHHHHHHHHHHHHhhhhc-eeeeEEecccceeecccCCCceEEEeccceeEEccCCCee
Confidence 9999999997 456799999999999999999999999 999999999999995 5789999999999876543
Q ss_pred CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHH
Q 011519 210 RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289 (484)
Q Consensus 210 ~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 289 (484)
....||+.|+|||++.+..++.++|||||||++|||+||..||................. ......+..+++++.+|+
T Consensus 167 ~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~s~~~~~li 244 (307)
T d1a06a_ 167 STACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEY--EFDSPYWDDISDSAKDFI 244 (307)
T ss_dssp ------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCC--CCCTTTTTTSCHHHHHHH
T ss_pred eeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhccCC--CCCCccccCCCHHHHHHH
Confidence 356799999999999999999999999999999999999999876543333222211111 111223455678999999
Q ss_pred HHHhccCCCCCCChHHHHHHH
Q 011519 290 SRCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 290 ~~cl~~dp~~Rps~~~il~~l 310 (484)
.+||+.||++|||+.|+++|-
T Consensus 245 ~~~L~~dP~~R~s~~eil~hp 265 (307)
T d1a06a_ 245 RHLMEKDPEKRFTCEQALQHP 265 (307)
T ss_dssp HHHSCSSGGGSCCHHHHHHST
T ss_pred HHHccCCHhHCcCHHHHhcCH
Confidence 999999999999999999873
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-55 Score=412.89 Aligned_cols=244 Identities=18% Similarity=0.243 Sum_probs=199.8
Q ss_pred ccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCC--ccHHHHHHHHHHHhcCCCCceeeeeeeeee----CCceEEE
Q 011519 59 ENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCE----GDERLLV 131 (484)
Q Consensus 59 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~----~~~~~lv 131 (484)
+++..+||+|+||+||+|+. .+++.||||++..... ...+.|.+|+++|++++|||||++++++.. ...++||
T Consensus 11 ~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~iv 90 (270)
T d1t4ha_ 11 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 90 (270)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEE
Confidence 45566799999999999995 5788999999875432 235679999999999999999999999865 3458999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC--cccccccccceeec-CCCCceeeccCCccccCC
Q 011519 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKER--ALYHDLNAYRIVFD-DDVNPRLSCFGLMKNSRD 208 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~--ivH~Dlkp~Nill~-~~~~~kl~DfG~a~~~~~ 208 (484)
|||+++|+|.+++. ....+++..+..++.||+.||.|||++ + ||||||||+|||++ .++.+||+|||+++....
T Consensus 91 mE~~~~g~L~~~l~--~~~~~~~~~~~~~~~qi~~gl~yLH~~-~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~ 167 (270)
T d1t4ha_ 91 TELMTSGTLKTYLK--RFKVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 167 (270)
T ss_dssp EECCCSCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred EeCCCCCcHHHHHh--ccccccHHHHHHHHHHHHHHHHHHHHC-CCCEEeCCcChhhceeeCCCCCEEEeecCcceeccC
Confidence 99999999999997 345799999999999999999999998 7 99999999999997 578999999999987554
Q ss_pred C--CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhh-HHhhhccccccccccccCCCChHHHHHH
Q 011519 209 G--RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHAL-DLIRDRNIQTLTDSCLEGQFSSDEGTEL 285 (484)
Q Consensus 209 ~--~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l 285 (484)
. ....||+.|+|||++.+ .++.++|||||||++|||+||+.||..... ..+......... ...++...++++
T Consensus 168 ~~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~~~----~~~~~~~~~~~~ 242 (270)
T d1t4ha_ 168 SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVK----PASFDKVAIPEV 242 (270)
T ss_dssp TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCC----CGGGGGCCCHHH
T ss_pred CccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcCCC----CcccCccCCHHH
Confidence 3 35689999999999875 599999999999999999999999864321 111111111111 112233456789
Q ss_pred HHHHHHHhccCCCCCCChHHHHHHH
Q 011519 286 VRLASRCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 286 ~~li~~cl~~dp~~Rps~~~il~~l 310 (484)
.+|+.+||+.||++|||+.|+++|-
T Consensus 243 ~~li~~~l~~dp~~R~s~~ell~Hp 267 (270)
T d1t4ha_ 243 KEIIEGCIRQNKDERYSIKDLLNHA 267 (270)
T ss_dssp HHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred HHHHHHHccCCHhHCcCHHHHhCCc
Confidence 9999999999999999999999873
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.7e-56 Score=420.37 Aligned_cols=246 Identities=17% Similarity=0.163 Sum_probs=209.6
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCC---CccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 132 (484)
++|++++.||+|+||+||+|.. .+|+.||||+++... ....+.+.+|+++|++++|||||++++++.+.+..||||
T Consensus 8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm 87 (288)
T d1uu3a_ 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 87 (288)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEE
T ss_pred CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEE
Confidence 5789999999999999999995 579999999996432 223567999999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC---
Q 011519 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG--- 209 (484)
Q Consensus 133 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~--- 209 (484)
|||+||+|.+++. ..+.+++..+..++.||+.||.|||+. |||||||||+|||+++++.+||+|||+++.....
T Consensus 88 Ey~~gg~L~~~~~--~~~~l~e~~~~~~~~qi~~al~ylH~~-~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~ 164 (288)
T d1uu3a_ 88 SYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLHGK-GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 164 (288)
T ss_dssp CCCTTEEHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred EccCCCCHHHhhh--ccCCCCHHHHHHHHHHHHHHHHhhccc-cEEcCcCCccccccCCCceEEecccccceecccCCcc
Confidence 9999999999986 446799999999999999999999999 9999999999999999999999999999876432
Q ss_pred ---CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHH
Q 011519 210 ---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 286 (484)
Q Consensus 210 ---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 286 (484)
....||+.|+|||++.+..++.++|||||||++|||+||..||............... ...++..+++++.
T Consensus 165 ~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~ 238 (288)
T d1uu3a_ 165 ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL------EYDFPEKFFPKAR 238 (288)
T ss_dssp -----CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTT------CCCCCTTCCHHHH
T ss_pred cccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHHHcC------CCCCCccCCHHHH
Confidence 3457999999999999999999999999999999999999998765333222221111 1134566778999
Q ss_pred HHHHHHhccCCCCCCChHHHHHHHH
Q 011519 287 RLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 287 ~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
+||.+||+.||.+|||++|++.+.+
T Consensus 239 ~li~~~L~~dP~~R~t~~e~~~~~~ 263 (288)
T d1uu3a_ 239 DLVEKLLVLDATKRLGCEEMEGYGP 263 (288)
T ss_dssp HHHHTTSCSSGGGSTTSGGGTCHHH
T ss_pred HHHHHHccCCHhHCcCHHHHcCCHH
Confidence 9999999999999999999866543
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=5.4e-55 Score=424.62 Aligned_cols=251 Identities=19% Similarity=0.154 Sum_probs=213.5
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEec
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey 134 (484)
|+.|++++.||+|+||+||+|+. .+|+.||||+++.....+.+.+.+|+.+|++++|||||++++++.+.+.+||||||
T Consensus 28 ~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~ 107 (352)
T d1koba_ 28 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 107 (352)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 45789999999999999999994 67999999999876555566789999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeec--CCCCceeeccCCccccCCCC--
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD--DDVNPRLSCFGLMKNSRDGR-- 210 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~--~~~~~kl~DfG~a~~~~~~~-- 210 (484)
|+||+|.+++.. .+.++++.+++.|+.||+.||.|||+. |||||||||+|||++ .++.+||+|||+++......
T Consensus 108 ~~gg~L~~~~~~-~~~~l~e~~~~~i~~qi~~aL~ylH~~-~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~~~ 185 (352)
T d1koba_ 108 LSGGELFDRIAA-EDYKMSEAEVINYMRQACEGLKHMHEH-SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIV 185 (352)
T ss_dssp CCCCBHHHHTTC-TTCCBCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCE
T ss_pred CCCChHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHC-CeeecccccccccccccCCCeEEEeecccceecCCCCce
Confidence 999999998753 345699999999999999999999998 999999999999998 67899999999998876543
Q ss_pred -cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHH
Q 011519 211 -SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289 (484)
Q Consensus 211 -~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 289 (484)
...||+.|+|||++.+..++.++|||||||++|+|+||+.||.+............... .........+++++.+||
T Consensus 186 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~s~~~~~li 263 (352)
T d1koba_ 186 KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDW--EFDEDAFSSVSPEAKDFI 263 (352)
T ss_dssp EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCC--CCCSSTTTTSCHHHHHHH
T ss_pred eeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC--CCCcccccCCCHHHHHHH
Confidence 45789999999999999999999999999999999999999876533322211111111 111223345678999999
Q ss_pred HHHhccCCCCCCChHHHHHHH
Q 011519 290 SRCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 290 ~~cl~~dp~~Rps~~~il~~l 310 (484)
.+||+.||.+|||+.++++|-
T Consensus 264 ~~~L~~dp~~R~s~~eil~Hp 284 (352)
T d1koba_ 264 KNLLQKEPRKRLTVHDALEHP 284 (352)
T ss_dssp HTTSCSSGGGSCCHHHHHTST
T ss_pred HHHccCChhHCcCHHHHhcCH
Confidence 999999999999999999873
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.6e-55 Score=411.82 Aligned_cols=253 Identities=23% Similarity=0.336 Sum_probs=208.9
Q ss_pred CCcccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecC
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~ 135 (484)
++++++.+.||+|+||+||+|++.+++.||||+++... ...+.|.+|+.++++++|||||+++|++. .+..++||||+
T Consensus 16 ~~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~-~~~~~~~~E~~~l~~l~h~nIv~~~g~~~-~~~~~lv~Ey~ 93 (285)
T d1fmka3 16 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYM 93 (285)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEECCC
T ss_pred HHHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECccc-CCHHHHHHHHHHHHhcccCCEeEEEEEEe-cCCeEEEEEec
Confidence 45788999999999999999998888889999997554 34578999999999999999999999985 45689999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-----C
Q 011519 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-----R 210 (484)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~-----~ 210 (484)
++|+|..++.......++|.+++.++.||+.||.|||+. +|+||||||+||||+.++++||+|||+++..... .
T Consensus 94 ~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~-~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~ 172 (285)
T d1fmka3 94 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM-NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 172 (285)
T ss_dssp TTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECGGGCEEECCCCTTC-----------
T ss_pred CCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhh-heecccccceEEEECCCCcEEEcccchhhhccCCCceeec
Confidence 999999998754556799999999999999999999999 9999999999999999999999999999865432 2
Q ss_pred cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHH-hhhccccccccccccCCCChHHHHHHHHHH
Q 011519 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDL-IRDRNIQTLTDSCLEGQFSSDEGTELVRLA 289 (484)
Q Consensus 211 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 289 (484)
...||+.|+|||++.++.++.++|||||||++|||+||+.|+....... .... +........+..+++++.+|+
T Consensus 173 ~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~-----i~~~~~~~~~~~~~~~l~~li 247 (285)
T d1fmka3 173 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ-----VERGYRMPCPPECPESLHDLM 247 (285)
T ss_dssp ---CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHH-----HHTTCCCCCCTTSCHHHHHHH
T ss_pred cccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHH-----HHhcCCCCCCcccCHHHHHHH
Confidence 3567899999999999999999999999999999999876665432211 1111 111122234566778999999
Q ss_pred HHHhccCCCCCCChHHHHHHHHhhhcC
Q 011519 290 SRCLQYEPRERPNPRSLVTALVTLQKD 316 (484)
Q Consensus 290 ~~cl~~dp~~Rps~~~il~~l~~~~~~ 316 (484)
.+||+.||++|||+++|++.|+.....
T Consensus 248 ~~cl~~dP~~Rps~~~i~~~L~~~~~~ 274 (285)
T d1fmka3 248 CQCWRKEPEERPTFEYLQAFLEDYFTS 274 (285)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred HHHcccCHhHCcCHHHHHHHHhhhhcC
Confidence 999999999999999999998876543
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-54 Score=410.55 Aligned_cols=253 Identities=21% Similarity=0.290 Sum_probs=204.1
Q ss_pred cccccccCCCCCCceEEEEEeCC-C----cEEEEEEecCCCCcc-HHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEE
Q 011519 58 MENIVSEHGEKAPNVVYKGKLEN-Q----FRIAVKRFNRSAWPD-ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~~~-~----~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 131 (484)
.+++.+.||+|+||+||+|.+.+ + ..||||+++...... ..+|.+|+.+|++++|||||+++|++.+.+..++|
T Consensus 8 ~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~v 87 (283)
T d1mqba_ 8 CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMII 87 (283)
T ss_dssp TEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEE
T ss_pred HeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEEE
Confidence 45566677999999999998543 2 479999997654333 45799999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC--
Q 011519 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 209 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~-- 209 (484)
|||+.+|+|.+++.. ....+++.++..++.||+.||.|||+. +|+||||||+||||+.++.+||+|||+++.....
T Consensus 88 ~e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~~i~~gl~~lH~~-~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~ 165 (283)
T d1mqba_ 88 TEYMENGALDKFLRE-KDGEFSVLQLVGMLRGIAAGMKYLANM-NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE 165 (283)
T ss_dssp EECCTTEEHHHHHHH-TTTCSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTCCEEECCCCC---------
T ss_pred EEecccCcchhhhhc-ccccccHHHHHHHHHHHHHhhhhcccc-ccccCccccceEEECCCCeEEEcccchhhcccCCCc
Confidence 999999999998864 445799999999999999999999998 9999999999999999999999999999875432
Q ss_pred -----CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHH
Q 011519 210 -----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTE 284 (484)
Q Consensus 210 -----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (484)
....||+.|+|||++.++.++.++|||||||++|||+||+.|+........ ....+....+...+..++..
T Consensus 166 ~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~~~~ 241 (283)
T d1mqba_ 166 ATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHE----VMKAINDGFRLPTPMDCPSA 241 (283)
T ss_dssp --------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH----HHHHHHTTCCCCCCTTCBHH
T ss_pred cceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHHH----HHHHHhccCCCCCchhhHHH
Confidence 234578899999999999999999999999999999997766654321110 11111112233445667789
Q ss_pred HHHHHHHHhccCCCCCCChHHHHHHHHhhhcC
Q 011519 285 LVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316 (484)
Q Consensus 285 l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 316 (484)
+.+|+.+||+.||++|||+.+|++.|+.+.+.
T Consensus 242 l~~li~~cl~~~p~~RPt~~eil~~L~~l~~~ 273 (283)
T d1mqba_ 242 IYQLMMQCWQQERARRPKFADIVSILDKLIRA 273 (283)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHCcCCHhHCcCHHHHHHHHHHHhhC
Confidence 99999999999999999999999999988764
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=9e-55 Score=422.70 Aligned_cols=250 Identities=19% Similarity=0.144 Sum_probs=211.8
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecC
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~ 135 (484)
++|++++.||+|+||+||+|+. .+|+.||||++........+.+.+|+.+|++++|||||++++++.+.+..+||||||
T Consensus 26 ~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~ 105 (350)
T d1koaa2 26 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM 105 (350)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence 4688999999999999999994 679999999998766556678999999999999999999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeec--CCCCceeeccCCccccCCCC---
Q 011519 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD--DDVNPRLSCFGLMKNSRDGR--- 210 (484)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~--~~~~~kl~DfG~a~~~~~~~--- 210 (484)
+||+|.+++.+ ..+.+++..+..|+.||+.||.|||++ |||||||||+|||++ .++.+||+|||+++......
T Consensus 106 ~gg~L~~~l~~-~~~~l~e~~~~~i~~qi~~aL~ylH~~-~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~ 183 (350)
T d1koaa2 106 SGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHEN-NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK 183 (350)
T ss_dssp CSCBHHHHHTC-TTSCBCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTSCEE
T ss_pred CCCCHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHhc-CCeeeeechhHeeeccCCCCeEEEeecchheecccccccc
Confidence 99999999954 345699999999999999999999999 999999999999996 46889999999998765543
Q ss_pred cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHH
Q 011519 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (484)
Q Consensus 211 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (484)
...||+.|||||++.+..++.++|||||||++|+|+||+.||.+............... .........+++++.+||.
T Consensus 184 ~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~s~~~~~li~ 261 (350)
T d1koaa2 184 VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDW--NMDDSAFSGISEDGKDFIR 261 (350)
T ss_dssp EECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC--CSCCGGGGGCCHHHHHHHH
T ss_pred eecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC--CCCcccccCCCHHHHHHHH
Confidence 46789999999999999999999999999999999999999876533222211111100 0111122445788999999
Q ss_pred HHhccCCCCCCChHHHHHHH
Q 011519 291 RCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~l 310 (484)
+||..||++|||+.++++|-
T Consensus 262 ~~L~~dP~~R~t~~eil~hp 281 (350)
T d1koaa2 262 KLLLADPNTRMTIHQALEHP 281 (350)
T ss_dssp HHCCSSGGGSCCHHHHHHST
T ss_pred HHccCChhHCcCHHHHhcCc
Confidence 99999999999999999983
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-54 Score=408.76 Aligned_cols=247 Identities=20% Similarity=0.276 Sum_probs=204.8
Q ss_pred cccc-cCCCCCCceEEEEEeC---CCcEEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEec
Q 011519 60 NIVS-EHGEKAPNVVYKGKLE---NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (484)
Q Consensus 60 ~~~~-~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey 134 (484)
.+.. +||+|+||+||+|++. ++..||||+++..... ..++|.+|+++|++++|||||+++|++.. +..+|||||
T Consensus 11 ~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~lvmE~ 89 (285)
T d1u59a_ 11 LIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEM 89 (285)
T ss_dssp EEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEEC
T ss_pred EECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEEEEEe
Confidence 3334 4899999999999853 3567999999765433 35679999999999999999999999864 568999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-----
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----- 209 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~----- 209 (484)
|++|+|.+++.. .+..+++..+..++.||+.||.|||++ +||||||||+|||++.++.+||+|||+++.....
T Consensus 90 ~~~g~L~~~l~~-~~~~l~~~~~~~i~~qi~~gL~ylH~~-~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~ 167 (285)
T d1u59a_ 90 AGGGPLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEK-NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYT 167 (285)
T ss_dssp CTTEEHHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEEC
T ss_pred CCCCcHHHHhhc-cccCCCHHHHHHHHHHHHHHHHHHHhC-CeecCcCchhheeeccCCceeeccchhhhcccccccccc
Confidence 999999999853 345799999999999999999999999 9999999999999999999999999999875432
Q ss_pred --CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHHHH
Q 011519 210 --RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELV 286 (484)
Q Consensus 210 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 286 (484)
....||+.|+|||++.++.++.++|||||||++|||+| |+.||.......+... +....+...|..+++++.
T Consensus 168 ~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~-----i~~~~~~~~p~~~~~~l~ 242 (285)
T d1u59a_ 168 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAF-----IEQGKRMECPPECPPELY 242 (285)
T ss_dssp CCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHH-----HHTTCCCCCCTTCCHHHH
T ss_pred cccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHHHHHH-----HHcCCCCCCCCcCCHHHH
Confidence 23467889999999998999999999999999999998 8888765432222111 111122345667788999
Q ss_pred HHHHHHhccCCCCCCChHHHHHHHHhhh
Q 011519 287 RLASRCLQYEPRERPNPRSLVTALVTLQ 314 (484)
Q Consensus 287 ~li~~cl~~dp~~Rps~~~il~~l~~~~ 314 (484)
+|+.+||+.||++|||+.+|++.|+...
T Consensus 243 ~li~~cl~~~p~~RPs~~~i~~~L~~~~ 270 (285)
T d1u59a_ 243 ALMSDCWIYKWEDRPDFLTVEQRMRACY 270 (285)
T ss_dssp HHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence 9999999999999999999999887654
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.1e-55 Score=420.38 Aligned_cols=250 Identities=21% Similarity=0.280 Sum_probs=205.2
Q ss_pred CcccccccCCCCCCceEEEEEeC-CC-----cEEEEEEecCCCC-ccHHHHHHHHHHHhcC-CCCceeeeeeeeeeCCce
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLE-NQ-----FRIAVKRFNRSAW-PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDER 128 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~-~~-----~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~ 128 (484)
+++++++.||+|+||+||+|+.. .+ ..||||.+..... .....|.+|+.+|.++ +|||||++++++.+.+..
T Consensus 37 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~ 116 (325)
T d1rjba_ 37 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPI 116 (325)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCeE
Confidence 56788899999999999999843 22 3699999865432 3356799999999998 899999999999999999
Q ss_pred EEEEecCCCCCHHhhhccCCC---------------------CCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccce
Q 011519 129 LLVAEYMPNDTLAKHLFHWET---------------------QPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRI 187 (484)
Q Consensus 129 ~lv~Ey~~~gsL~~~l~~~~~---------------------~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Ni 187 (484)
+||||||+||+|.++|..... ..+++..++.|+.||+.||.|||++ +||||||||+||
T Consensus 117 ~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~-~IiHRDlKp~Ni 195 (325)
T d1rjba_ 117 YLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK-SCVHRDLAARNV 195 (325)
T ss_dssp EEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT-TEEETTCSGGGE
T ss_pred EEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeccCchhcc
Confidence 999999999999999975321 3589999999999999999999999 999999999999
Q ss_pred eecCCCCceeeccCCccccCCCC------cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHh
Q 011519 188 VFDDDVNPRLSCFGLMKNSRDGR------SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLI 260 (484)
Q Consensus 188 ll~~~~~~kl~DfG~a~~~~~~~------~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~ 260 (484)
|++.++.+||+|||+++...... ...||+.|||||++.++.++.++|||||||++|||+| |..||.+......
T Consensus 196 ll~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~~ 275 (325)
T d1rjba_ 196 LVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDAN 275 (325)
T ss_dssp EEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH
T ss_pred ccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCHHHH
Confidence 99999999999999998654332 3456899999999999999999999999999999998 7888765322111
Q ss_pred hhccccccccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 261 RDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
. ..+.....+...|..+++++.+||.+||+.||++|||+++|+++|.
T Consensus 276 ~----~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~ 322 (325)
T d1rjba_ 276 F----YKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG 322 (325)
T ss_dssp H----HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred H----HHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHh
Confidence 1 1111122223455667789999999999999999999999999985
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.3e-54 Score=416.21 Aligned_cols=246 Identities=17% Similarity=0.222 Sum_probs=212.8
Q ss_pred CCcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCC---CccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEE
Q 011519 56 FAMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 131 (484)
.++|++++.||+|+||+||+|+ ..+|+.||||++++.. ....+.+.+|+.+|++++|||||++++++.+.+.+|+|
T Consensus 4 l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv 83 (337)
T d1o6la_ 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccc
Confidence 4578899999999999999999 4679999999997532 22357789999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC--
Q 011519 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 209 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~-- 209 (484)
||||+||+|.+++. ..+.+++..++.++.||+.||.|||++ |||||||||+|||++.+|.+||+|||+++.....
T Consensus 84 ~ey~~gg~L~~~~~--~~~~~~e~~~~~~~~qil~al~ylH~~-~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~~ 160 (337)
T d1o6la_ 84 MEYANGGELFFHLS--RERVFTEERARFYGAEIVSALEYLHSR-DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA 160 (337)
T ss_dssp EECCTTCBHHHHHH--HHSCCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTC
T ss_pred eeccCCCchhhhhh--cccCCcHHHHHHHHHHHhhhhhhhhhc-CccccccCHHHeEecCCCCEEEeecccccccccCCc
Confidence 99999999999997 456799999999999999999999999 9999999999999999999999999999865432
Q ss_pred --CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHH
Q 011519 210 --RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287 (484)
Q Consensus 210 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (484)
...+||+.|+|||++.+..++.++|||||||++|||+||+.||.......+....... ...+|..+++++.+
T Consensus 161 ~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~d 234 (337)
T d1o6la_ 161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME------EIRFPRTLSPEAKS 234 (337)
T ss_dssp CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHHH
T ss_pred ccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHhcC------CCCCCccCCHHHHH
Confidence 3567899999999999999999999999999999999999998876443332222111 12356667889999
Q ss_pred HHHHHhccCCCCCCC-----hHHHHHHH
Q 011519 288 LASRCLQYEPRERPN-----PRSLVTAL 310 (484)
Q Consensus 288 li~~cl~~dp~~Rps-----~~~il~~l 310 (484)
||.+||+.||.+||+ ++++++|-
T Consensus 235 li~~~L~~dP~~R~~~~~~~~~eil~Hp 262 (337)
T d1o6la_ 235 LLAGLLKKDPKQRLGGGPSDAKEVMEHR 262 (337)
T ss_dssp HHHHHTCSSTTTSTTCSTTTHHHHHTSG
T ss_pred HHHhhccCCchhhcccccccHHHHHcCc
Confidence 999999999999995 88999873
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.9e-54 Score=406.52 Aligned_cols=241 Identities=21% Similarity=0.261 Sum_probs=198.1
Q ss_pred cCCCCCCceEEEEEeC---CCcEEEEEEecCCCCc--cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEecCCCC
Q 011519 64 EHGEKAPNVVYKGKLE---NQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEYMPND 138 (484)
Q Consensus 64 ~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey~~~g 138 (484)
+||+|+||+||+|.+. .++.||||+++..... ..++|.+|+.+|++++|||||+++|++.. +..+|||||+++|
T Consensus 14 ~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~~~g 92 (277)
T d1xbba_ 14 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELG 92 (277)
T ss_dssp EEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECCTTE
T ss_pred CcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEcCCCC
Confidence 5899999999999853 3568999999754322 25679999999999999999999999854 5679999999999
Q ss_pred CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-------Cc
Q 011519 139 TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-------RS 211 (484)
Q Consensus 139 sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~-------~~ 211 (484)
+|.+++. ....+++..++.|+.||+.||.|||+. +||||||||+|||++.++.+||+|||+++..... ..
T Consensus 93 ~L~~~l~--~~~~l~~~~~~~i~~qi~~gl~ylH~~-~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~ 169 (277)
T d1xbba_ 93 PLNKYLQ--QNRHVKDKNIIELVHQVSMGMKYLEES-NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 169 (277)
T ss_dssp EHHHHHH--HCTTCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC---
T ss_pred cHHHHHh--hccCCCHHHHHHHHHHHHHHHhhHHhC-CcccCCCcchhhcccccCcccccchhhhhhccccccccccccc
Confidence 9999997 445799999999999999999999998 9999999999999999999999999999875432 23
Q ss_pred ccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHH
Q 011519 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (484)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (484)
..||+.|+|||++.+..++.++|||||||++|||+| |+.||.......+... +....+...|..+++++.+|+.
T Consensus 170 ~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~-----i~~~~~~~~p~~~~~~~~~li~ 244 (277)
T d1xbba_ 170 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM-----LEKGERMGCPAGCPREMYDLMN 244 (277)
T ss_dssp -CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHH-----HHTTCCCCCCTTCCHHHHHHHH
T ss_pred cCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHH-----HHcCCCCCCCcccCHHHHHHHH
Confidence 467899999999998999999999999999999998 7888765432222111 1111223455667789999999
Q ss_pred HHhccCCCCCCChHHHHHHHHhh
Q 011519 291 RCLQYEPRERPNPRSLVTALVTL 313 (484)
Q Consensus 291 ~cl~~dp~~Rps~~~il~~l~~~ 313 (484)
+||+.||++|||+.+|+..|+..
T Consensus 245 ~cl~~dp~~RPs~~~i~~~L~~~ 267 (277)
T d1xbba_ 245 LCWTYDVENRPGFAAVELRLRNY 267 (277)
T ss_dssp HHTCSSTTTSCCHHHHHHHHHHH
T ss_pred HHcCCCHhHCcCHHHHHHHhhCH
Confidence 99999999999999998887654
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=4.5e-54 Score=412.47 Aligned_cols=245 Identities=18% Similarity=0.207 Sum_probs=212.1
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCC---CccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVA 132 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 132 (484)
++|++++.||+|+||+||+|+. .+|+.||||+++... ....+.+.+|+.+|++++|||||++++++.+.+..|+||
T Consensus 4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm 83 (316)
T d1fota_ 4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 83 (316)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEe
Confidence 5689999999999999999995 679999999996432 223667999999999999999999999999999999999
Q ss_pred ecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-Cc
Q 011519 133 EYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-RS 211 (484)
Q Consensus 133 Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~-~~ 211 (484)
|||+||+|..++. ....+++..+..++.||+.||.|||++ |||||||||+|||++.+|.+||+|||+++..... ..
T Consensus 84 E~~~gg~l~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~-~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~~~~ 160 (316)
T d1fota_ 84 DYIEGGELFSLLR--KSQRFPNPVAKFYAAEVCLALEYLHSK-DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYT 160 (316)
T ss_dssp CCCCSCBHHHHHH--HTSSCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCC
T ss_pred eecCCcccccccc--ccccccccHHHHHHHHHHHhhhhhccC-cEEccccCchheeEcCCCCEEEecCccceEecccccc
Confidence 9999999999987 455689999999999999999999999 9999999999999999999999999999886554 46
Q ss_pred ccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHH
Q 011519 212 YSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASR 291 (484)
Q Consensus 212 ~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 291 (484)
..||+.|+|||++.+..++.++|||||||++|||+||+.||............... ...++...++++.+++.+
T Consensus 161 ~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~~li~~ 234 (316)
T d1fota_ 161 LCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNA------ELRFPPFFNEDVKDLLSR 234 (316)
T ss_dssp CCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHC------CCCCCTTSCHHHHHHHHH
T ss_pred ccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHHHcC------CCCCCCCCCHHHHHHHHH
Confidence 78999999999999999999999999999999999999998765433322221111 123455667889999999
Q ss_pred HhccCCCCCC-----ChHHHHHHH
Q 011519 292 CLQYEPRERP-----NPRSLVTAL 310 (484)
Q Consensus 292 cl~~dp~~Rp-----s~~~il~~l 310 (484)
||..||.+|+ |++++++|-
T Consensus 235 ~L~~dp~~R~~~~r~t~~~il~Hp 258 (316)
T d1fota_ 235 LITRDLSQRLGNLQNGTEDVKNHP 258 (316)
T ss_dssp HTCSCTTTCTTSSTTTTHHHHTSG
T ss_pred HhhhCHHhccccchhhHHHHHcCc
Confidence 9999999996 899999883
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-54 Score=405.35 Aligned_cols=251 Identities=25% Similarity=0.354 Sum_probs=203.0
Q ss_pred CCcccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeee-CCceEEEEec
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCE-GDERLLVAEY 134 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~~~~~lv~Ey 134 (484)
.+++++++.||+|+||.||+|.. .|+.||||+++... ..+.|.+|++++++++|||||+++|++.+ .+.++|||||
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~i~~~~--~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey 82 (262)
T d1byga_ 6 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 82 (262)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred HHHeEEeEEEecCCCeEEEEEEE-CCeEEEEEEECcHH--HHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEec
Confidence 45678889999999999999998 46789999997543 45779999999999999999999999865 4568999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-Cccc
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-RSYS 213 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~-~~~~ 213 (484)
+++|+|.++|.......+++..++.|+.||+.||.|||+. +||||||||+|||++.++.+||+|||+++..... ....
T Consensus 83 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~-~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~~~~~~ 161 (262)
T d1byga_ 83 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN-NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK 161 (262)
T ss_dssp CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECTTSCEEECCCCC------------
T ss_pred cCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccC-ceeccccchHhheecCCCCEeecccccceecCCCCcccc
Confidence 9999999999654444689999999999999999999999 9999999999999999999999999999875443 4556
Q ss_pred CCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHHHH
Q 011519 214 TNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLASRC 292 (484)
Q Consensus 214 ~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 292 (484)
+|+.|+|||++.++.++.++|||||||++|||+| |+.|+.......+... +....+..++...++++.+|+.+|
T Consensus 162 ~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~-----i~~~~~~~~~~~~~~~~~~li~~c 236 (262)
T d1byga_ 162 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPR-----VEKGYKMDAPDGCPPAVYEVMKNC 236 (262)
T ss_dssp CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHH-----HTTTCCCCCCTTCCHHHHHHHHHH
T ss_pred ccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHH-----HHcCCCCCCCccCCHHHHHHHHHH
Confidence 7899999999999999999999999999999999 5655544322222111 111223345666778999999999
Q ss_pred hccCCCCCCChHHHHHHHHhhhc
Q 011519 293 LQYEPRERPNPRSLVTALVTLQK 315 (484)
Q Consensus 293 l~~dp~~Rps~~~il~~l~~~~~ 315 (484)
|+.||.+|||+.+++++|+.++.
T Consensus 237 l~~dP~~Rps~~~l~~~L~~i~~ 259 (262)
T d1byga_ 237 WHLDAAMRPSFLQLREQLEHIKT 259 (262)
T ss_dssp TCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cccCHhHCcCHHHHHHHHHHHHh
Confidence 99999999999999999998864
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.7e-54 Score=409.97 Aligned_cols=248 Identities=17% Similarity=0.165 Sum_probs=207.8
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCc------cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEE
Q 011519 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP------DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 130 (484)
.|++++.||+|+||+||+|+. .+|+.||||+++..... ..+.|.+|+.+|++++|||||++++++.+.+..+|
T Consensus 11 ~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~i 90 (293)
T d1jksa_ 11 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVIL 90 (293)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 589999999999999999995 67999999999654321 25679999999999999999999999999999999
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCC----CceeeccCCcccc
Q 011519 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV----NPRLSCFGLMKNS 206 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~----~~kl~DfG~a~~~ 206 (484)
|||||+||+|.++|.. .+.+++..+..++.||+.||.|||+. +||||||||+|||++.++ .+||+|||++...
T Consensus 91 v~E~~~gg~L~~~i~~--~~~l~~~~~~~~~~qi~~al~yLH~~-~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~ 167 (293)
T d1jksa_ 91 ILELVAGGELFDFLAE--KESLTEEEATEFLKQILNGVYYLHSL-QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 167 (293)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEESCSSSSSCCEEECCCTTCEEC
T ss_pred EEEcCCCccccchhcc--ccccchhHHHHHHHHHHHHHHhhhhc-ceeecccccceEEEecCCCcccceEecchhhhhhc
Confidence 9999999999999973 45799999999999999999999999 999999999999998776 4999999999876
Q ss_pred CCC---CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHH
Q 011519 207 RDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283 (484)
Q Consensus 207 ~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (484)
... ....||+.|+|||++.+..++.++|||||||++|||+||+.||.+................ .....+...++
T Consensus 168 ~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~s~ 245 (293)
T d1jksa_ 168 DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE--FEDEYFSNTSA 245 (293)
T ss_dssp TTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCC--CCHHHHTTSCH
T ss_pred CCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCC--CCchhcCCCCH
Confidence 543 3567899999999999989999999999999999999999998765433222111111000 00011234567
Q ss_pred HHHHHHHHHhccCCCCCCChHHHHHHH
Q 011519 284 ELVRLASRCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 284 ~l~~li~~cl~~dp~~Rps~~~il~~l 310 (484)
.+.+||.+||+.||.+|||+.++++|-
T Consensus 246 ~~~~li~~~L~~dP~~R~s~~eil~hp 272 (293)
T d1jksa_ 246 LAKDFIRRLLVKDPKKRMTIQDSLQHP 272 (293)
T ss_dssp HHHHHHHTTSCSSGGGSCCHHHHHHST
T ss_pred HHHHHHHHHccCChhHCcCHHHHhcCc
Confidence 899999999999999999999999873
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=3.7e-53 Score=400.06 Aligned_cols=253 Identities=17% Similarity=0.203 Sum_probs=205.4
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCcc---HHHHHHHHHHHhcCCCCceeeeeeeeeeCCc----e
Q 011519 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD---ARQFLEEARAVGQLRNRRLANLLGCCCEGDE----R 128 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~----~ 128 (484)
++|++++.||+|+||+||+|+ ..+|+.||||+++.....+ ...|.+|+.+|+.++|||||++++++...+. .
T Consensus 7 drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~ 86 (277)
T d1o6ya_ 7 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 86 (277)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred ceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceE
Confidence 468999999999999999999 4679999999997654433 4568999999999999999999999876543 7
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC
Q 011519 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 208 (484)
Q Consensus 129 ~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~ 208 (484)
||||||++||+|.+++. ..+.+++.++..++.||+.||.|||+. |||||||||+|||++.++.++|+|||.+.....
T Consensus 87 ~lvmE~~~g~~L~~~~~--~~~~l~~~~~~~i~~qi~~al~~lH~~-~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~ 163 (277)
T d1o6ya_ 87 YIVMEYVDGVTLRDIVH--TEGPMTPKRAIEVIADACQALNFSHQN-GIIHRDVKPANIMISATNAVKVMDFGIARAIAD 163 (277)
T ss_dssp EEEEECCCEEEHHHHHH--HHCSCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEETTSCEEECCCTTCEECC-
T ss_pred EEEEECCCCCEehhhhc--ccCCCCHHHHHHHHHHHHHHHHHHHhC-CccCccccCcccccCccccceeehhhhhhhhcc
Confidence 99999999999999986 445799999999999999999999998 999999999999999999999999999875432
Q ss_pred -------CCcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHH
Q 011519 209 -------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDE 281 (484)
Q Consensus 209 -------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (484)
.....||+.|+|||++.+..++.++|||||||++|||+||+.||...............-.. ........+
T Consensus 164 ~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 241 (277)
T d1o6ya_ 164 SGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPI--PPSARHEGL 241 (277)
T ss_dssp ---------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCC--CGGGTSSSC
T ss_pred ccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhcCCC--CCchhccCC
Confidence 23457899999999999989999999999999999999999998765333222111111110 111123445
Q ss_pred HHHHHHHHHHHhccCCCCCC-ChHHHHHHHHhhh
Q 011519 282 GTELVRLASRCLQYEPRERP-NPRSLVTALVTLQ 314 (484)
Q Consensus 282 ~~~l~~li~~cl~~dp~~Rp-s~~~il~~l~~~~ 314 (484)
++++.+||.+||+.||.+|| |++++++.|.+++
T Consensus 242 s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~~ 275 (277)
T d1o6ya_ 242 SADLDAVVLKALAKNPENRYQTAAEMRADLVRVH 275 (277)
T ss_dssp CHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHccCCHhHCHhHHHHHHHHHHHHh
Confidence 68899999999999999999 8999999998775
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=2.1e-53 Score=413.42 Aligned_cols=246 Identities=17% Similarity=0.172 Sum_probs=212.1
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCC---CccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEE
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 131 (484)
+++|++++.||+|+||+||+|+. .+|+.||||++.... ....+.+.+|+.+|+.++|||||++++++......++|
T Consensus 40 ld~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v 119 (350)
T d1rdqe_ 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeecccccccccccccc
Confidence 46789999999999999999995 579999999986432 22356799999999999999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-C
Q 011519 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-R 210 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~-~ 210 (484)
|||+.||+|.+++. ..+.+++..+..++.||+.||.|||+. |||||||||+|||++.+|.+||+|||+++..... .
T Consensus 120 ~e~~~~g~l~~~l~--~~~~l~e~~~~~i~~qi~~aL~yLH~~-~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~~~ 196 (350)
T d1rdqe_ 120 MEYVAGGEMFSHLR--RIGRFSEPHARFYAAQIVLTFEYLHSL-DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196 (350)
T ss_dssp EECCTTCBHHHHHH--HHCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTSCEEECCCTTCEECSSCBC
T ss_pred cccccccchhhhHh--hcCCCCHHHHHHHHHHHHHHHHHHHhC-CEecCcCCHHHcccCCCCCEEeeeceeeeecccccc
Confidence 99999999999997 345799999999999999999999999 9999999999999999999999999999887643 4
Q ss_pred cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHHHH
Q 011519 211 SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRLAS 290 (484)
Q Consensus 211 ~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 290 (484)
...||+.|||||++.+..++.++|||||||++|||+||..||............... ...++..+++++.+||.
T Consensus 197 ~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~------~~~~p~~~s~~~~~li~ 270 (350)
T d1rdqe_ 197 TLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG------KVRFPSHFSSDLKDLLR 270 (350)
T ss_dssp CCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTCCHHHHHHHH
T ss_pred cccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHhcC------CCCCCccCCHHHHHHHH
Confidence 577999999999999999999999999999999999999998765333222221111 11245566789999999
Q ss_pred HHhccCCCCCC-----ChHHHHHHH
Q 011519 291 RCLQYEPRERP-----NPRSLVTAL 310 (484)
Q Consensus 291 ~cl~~dp~~Rp-----s~~~il~~l 310 (484)
+||..||.+|+ |++++++|-
T Consensus 271 ~~L~~dP~kR~~~~r~t~~ell~Hp 295 (350)
T d1rdqe_ 271 NLLQVDLTKRFGNLKNGVNDIKNHK 295 (350)
T ss_dssp HHSCSCTTTCTTSSTTTTHHHHTSG
T ss_pred HHhhhCHHhccccccccHHHHHcCc
Confidence 99999999994 899999873
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=3.7e-53 Score=398.40 Aligned_cols=249 Identities=18% Similarity=0.163 Sum_probs=209.7
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCcc---------HHHHHHHHHHHhcCC-CCceeeeeeeeee
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPD---------ARQFLEEARAVGQLR-NRRLANLLGCCCE 124 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---------~~~~~~E~~~l~~l~-hpniv~l~~~~~~ 124 (484)
|.+|++++.||+|+||+||+|+. .+|+.||||+++...... .+.+.+|+.+|++++ |||||++++++.+
T Consensus 2 ~~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 81 (277)
T d1phka_ 2 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 81 (277)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred cccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeccc
Confidence 56889999999999999999994 679999999997654321 235889999999997 9999999999999
Q ss_pred CCceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCcc
Q 011519 125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK 204 (484)
Q Consensus 125 ~~~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~ 204 (484)
++..|||||||+||+|.++|. ..+++++.++..++.||+.||+|||++ ||+||||||+|||++.++.+||+|||+++
T Consensus 82 ~~~~~ivmE~~~~g~L~~~l~--~~~~l~e~~~~~~~~qi~~al~~lH~~-~ivHrDlkp~Nill~~~~~~kl~DFG~a~ 158 (277)
T d1phka_ 82 NTFFFLVFDLMKKGELFDYLT--EKVTLSEKETRKIMRALLEVICALHKL-NIVHRDLKPENILLDDDMNIKLTDFGFSC 158 (277)
T ss_dssp SSEEEEEEECCTTCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred CcceEEEEEcCCCchHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHc-CCcccccccceEEEcCCCCeEEccchhee
Confidence 999999999999999999997 345799999999999999999999998 99999999999999999999999999998
Q ss_pred ccCCC---CcccCCCCCCCcccccC------CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccC
Q 011519 205 NSRDG---RSYSTNLAFTPPEYLRT------GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEG 275 (484)
Q Consensus 205 ~~~~~---~~~~~t~~y~aPE~~~~------~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 275 (484)
..... ....||+.|+|||.+.+ ..++.++||||+||++|+|+||+.||...............-. ....
T Consensus 159 ~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~~~~--~~~~ 236 (277)
T d1phka_ 159 QLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNY--QFGS 236 (277)
T ss_dssp ECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC--CCCT
T ss_pred EccCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHhCCC--CCCC
Confidence 76543 45678999999999863 3478899999999999999999999876543332222111111 1112
Q ss_pred CCChHHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 276 QFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 276 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
.....+++++.+|+.+||+.||.+|||+.++++|
T Consensus 237 ~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h 270 (277)
T d1phka_ 237 PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH 270 (277)
T ss_dssp TTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred cccccCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 2334677899999999999999999999999887
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.4e-53 Score=399.29 Aligned_cols=251 Identities=20% Similarity=0.272 Sum_probs=199.8
Q ss_pred CcccccccCCCCCCceEEEEEeCC----CcEEEEEEecCCCCcc-HHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLEN----QFRIAVKRFNRSAWPD-ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLV 131 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 131 (484)
++|++.+.||+|+||+||+|++.. +..||||.++...... .+.|.+|+.+|++++|||||++++++. .+..++|
T Consensus 7 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~iv 85 (273)
T d1mp8a_ 7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWII 85 (273)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred HHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeEEEE
Confidence 578889999999999999998532 4568999987654333 567999999999999999999999985 4678999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC--
Q 011519 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 209 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~-- 209 (484)
|||+++|+|.+++.. ....+++..++.++.||+.||.|||+. ++|||||||+||+++.++.+||+|||+++.....
T Consensus 86 ~E~~~~g~l~~~~~~-~~~~l~~~~~~~~~~qi~~gl~ylH~~-~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~~ 163 (273)
T d1mp8a_ 86 MELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYLESK-RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 163 (273)
T ss_dssp EECCTTEEHHHHHHH-TTTTSCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEEETTEEEECC------------
T ss_pred EEeccCCcHHhhhhc-cCCCCCHHHHHHHHHHHHHHhhhhccc-CeeccccchhheeecCCCcEEEccchhheeccCCcc
Confidence 999999999998764 445799999999999999999999999 9999999999999999999999999999875432
Q ss_pred ---CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHHHH
Q 011519 210 ---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 285 (484)
Q Consensus 210 ---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 285 (484)
....||+.|+|||++.+..++.++|||||||++|||+| |..|+............. .......+..+++.+
T Consensus 164 ~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~-----~~~~~~~~~~~~~~~ 238 (273)
T d1mp8a_ 164 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE-----NGERLPMPPNCPPTL 238 (273)
T ss_dssp -------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH-----TTCCCCCCTTCCHHH
T ss_pred eeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHH-----cCCCCCCCCCCCHHH
Confidence 34567899999999999999999999999999999998 676665432222111111 111223456677899
Q ss_pred HHHHHHHhccCCCCCCChHHHHHHHHhhhc
Q 011519 286 VRLASRCLQYEPRERPNPRSLVTALVTLQK 315 (484)
Q Consensus 286 ~~li~~cl~~dp~~Rps~~~il~~l~~~~~ 315 (484)
.+||.+||+.||++|||+.+|+++|+.+.+
T Consensus 239 ~~li~~cl~~dp~~Rps~~ei~~~L~~i~~ 268 (273)
T d1mp8a_ 239 YSLMTKCWAYDPSRRPRFTELKAQLSTILE 268 (273)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 999999999999999999999999988754
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=4.8e-53 Score=403.85 Aligned_cols=252 Identities=23% Similarity=0.308 Sum_probs=208.7
Q ss_pred CcccccccCCCCCCceEEEEEeC------CCcEEEEEEecCCCCcc-HHHHHHHHHHHhcCCCCceeeeeeeeeeCCceE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWPD-ARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 129 (484)
+++++++.||+|+||+||+|+.. +++.||||+++...... .++|.+|+.+|++++||||+++++++...+..+
T Consensus 13 ~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~ 92 (301)
T d1lufa_ 13 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMC 92 (301)
T ss_dssp GGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCE
T ss_pred HHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeeccCCceE
Confidence 35788899999999999999853 45789999997654433 567999999999999999999999999999999
Q ss_pred EEEecCCCCCHHhhhccCC----------------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccce
Q 011519 130 LVAEYMPNDTLAKHLFHWE----------------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRI 187 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Ni 187 (484)
+||||+++|+|.++|.... ...+++..++.|+.||+.||+|||+. ++|||||||+||
T Consensus 93 ~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~-~ivHrDlKp~NI 171 (301)
T d1lufa_ 93 LLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER-KFVHRDLATRNC 171 (301)
T ss_dssp EEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGE
T ss_pred EEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccC-CeEeeEEcccce
Confidence 9999999999999996321 23489999999999999999999999 999999999999
Q ss_pred eecCCCCceeeccCCccccCCC------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCC-CCchhhHHh
Q 011519 188 VFDDDVNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHI-PPSHALDLI 260 (484)
Q Consensus 188 ll~~~~~~kl~DfG~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p-~~~~~~~~~ 260 (484)
|++.++++||+|||+++..... ....+|+.|+|||.+.+..++.++|||||||++|||++|..| |........
T Consensus 172 Lld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e~ 251 (301)
T d1lufa_ 172 LVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEV 251 (301)
T ss_dssp EECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH
T ss_pred EECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCCCHHHH
Confidence 9999999999999998754322 345678899999999999999999999999999999999754 443322222
Q ss_pred hhccccccccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhh
Q 011519 261 RDRNIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQ 314 (484)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~ 314 (484)
..... . ......+..+++++.+|+.+||+.||++|||+.+|++.|+++.
T Consensus 252 ~~~v~----~-~~~~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~ 300 (301)
T d1lufa_ 252 IYYVR----D-GNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC 300 (301)
T ss_dssp HHHHH----T-TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred HHHHH----c-CCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence 11111 1 1122345567789999999999999999999999999999874
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.7e-53 Score=406.15 Aligned_cols=252 Identities=18% Similarity=0.275 Sum_probs=204.6
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCc----EEEEEEecCCCC-ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQF----RIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLL 130 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 130 (484)
++|++++.||+|+||+||+|.+ .+|+ .||||.++.... ...+.|.+|+.+|++++|||||+++|+|.++ ..++
T Consensus 9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~~ 87 (317)
T d1xkka_ 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 87 (317)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEE
T ss_pred HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CeeE
Confidence 4688999999999999999984 3443 689999875432 3467899999999999999999999999764 5788
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-
Q 011519 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG- 209 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~- 209 (484)
++||+.+|+|.+++.. ....+++..++.|+.||+.||.|||++ +||||||||+|||++.++.+||+|||+++.....
T Consensus 88 v~e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~qi~~gl~yLH~~-~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~ 165 (317)
T d1xkka_ 88 ITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDR-RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 165 (317)
T ss_dssp EEECCTTCBHHHHHHH-TSSSCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTC
T ss_pred EEEeccCCcccccccc-cccCCCHHHHHHHHHHHHHHHHHHHHc-CcccCcchhhcceeCCCCCeEeeccccceeccccc
Confidence 8999999999998865 456799999999999999999999998 9999999999999999999999999999875432
Q ss_pred -----CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChHHHH
Q 011519 210 -----RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGT 283 (484)
Q Consensus 210 -----~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (484)
....||+.|+|||++.++.++.++|||||||++|||+| |..||.......+. ..+....+...+..+++
T Consensus 166 ~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~-----~~i~~~~~~~~p~~~~~ 240 (317)
T d1xkka_ 166 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-----SILEKGERLPQPPICTI 240 (317)
T ss_dssp C--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHH-----HHHHHTCCCCCCTTBCH
T ss_pred ccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHH-----HHHHcCCCCCCCcccCH
Confidence 23457899999999999999999999999999999999 56665443222111 11111122234566778
Q ss_pred HHHHHHHHHhccCCCCCCChHHHHHHHHhhhcC
Q 011519 284 ELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316 (484)
Q Consensus 284 ~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 316 (484)
.+.+|+.+||+.||.+|||+.+|+.+|..+...
T Consensus 241 ~~~~li~~cl~~dP~~RPs~~eil~~l~~~~~~ 273 (317)
T d1xkka_ 241 DVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 273 (317)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHhCCCChhhCcCHHHHHHHHHHHHhC
Confidence 999999999999999999999999999887654
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.3e-53 Score=406.15 Aligned_cols=252 Identities=15% Similarity=0.163 Sum_probs=210.8
Q ss_pred CCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEe
Q 011519 55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (484)
Q Consensus 55 ~f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 133 (484)
-|++|.+++.||+|+||+||+|.. .+++.||||+++... .+...+.+|+.+|++++|||||++++++.+.+.+|||||
T Consensus 3 ~~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~-~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE 81 (321)
T d1tkia_ 3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFE 81 (321)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEEC
T ss_pred CccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc-ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEe
Confidence 378899999999999999999995 578999999997654 334568899999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecC--CCCceeeccCCccccCCCC-
Q 011519 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD--DVNPRLSCFGLMKNSRDGR- 210 (484)
Q Consensus 134 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~--~~~~kl~DfG~a~~~~~~~- 210 (484)
||+||+|.++|.. .+..+++.++..|+.||+.||.|||+. ||+||||||+|||++. .+.+||+|||+++......
T Consensus 82 ~~~gg~L~~~i~~-~~~~l~e~~~~~i~~qi~~al~yLH~~-~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~~ 159 (321)
T d1tkia_ 82 FISGLDIFERINT-SAFELNEREIVSYVHQVCEALQFLHSH-NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN 159 (321)
T ss_dssp CCCCCBHHHHHTS-SSCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCE
T ss_pred cCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHc-CCCcccccccceeecCCCceEEEEcccchhhccccCCc
Confidence 9999999999964 334699999999999999999999999 9999999999999984 4579999999998765542
Q ss_pred --cccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHH
Q 011519 211 --SYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288 (484)
Q Consensus 211 --~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 288 (484)
...+|+.|+|||.+.+..++.++|||||||++|+|++|..||................... .......+++++.+|
T Consensus 160 ~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~~~--~~~~~~~~s~~~~~l 237 (321)
T d1tkia_ 160 FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTF--DEEAFKEISIEAMDF 237 (321)
T ss_dssp EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCC--CHHHHTTSCHHHHHH
T ss_pred ccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC--ChhhccCCCHHHHHH
Confidence 4568899999999999999999999999999999999999987654333222211111000 000112356789999
Q ss_pred HHHHhccCCCCCCChHHHHHHHH
Q 011519 289 ASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 289 i~~cl~~dp~~Rps~~~il~~l~ 311 (484)
+.+||..||.+|||+.|+++|-+
T Consensus 238 i~~~L~~dp~~R~s~~eil~hp~ 260 (321)
T d1tkia_ 238 VDRLLVKERKSRMTASEALQHPW 260 (321)
T ss_dssp HHTTSCSSGGGSCCHHHHHHSHH
T ss_pred HHHHccCChhHCcCHHHHhcCHh
Confidence 99999999999999999999844
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.6e-53 Score=404.74 Aligned_cols=257 Identities=21% Similarity=0.283 Sum_probs=209.5
Q ss_pred CCCcccccccCCCCCCceEEEEEe-CCCc--EEEEEEecCCCC-ccHHHHHHHHHHHhcC-CCCceeeeeeeeeeCCceE
Q 011519 55 GFAMENIVSEHGEKAPNVVYKGKL-ENQF--RIAVKRFNRSAW-PDARQFLEEARAVGQL-RNRRLANLLGCCCEGDERL 129 (484)
Q Consensus 55 ~f~~~~~~~~lG~G~~g~Vy~~~~-~~~~--~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~~ 129 (484)
+|+++++.+.||+|+||+||+|++ .++. .||||.++.... ...+.|.+|+.+|+++ +|||||++++++.+.+..+
T Consensus 8 ~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~ 87 (309)
T d1fvra_ 8 DWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 87 (309)
T ss_dssp CGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEE
T ss_pred CHHHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeE
Confidence 467788888999999999999995 4454 578888864432 2456799999999999 7999999999999999999
Q ss_pred EEEecCCCCCHHhhhccC--------------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCc
Q 011519 130 LVAEYMPNDTLAKHLFHW--------------ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNP 195 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~~--------------~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~ 195 (484)
|||||++||+|.++|... ....+++..++.++.||+.||.|||+. +||||||||+|||++.++.+
T Consensus 88 iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~-~iiHrDlkp~NIL~~~~~~~ 166 (309)
T d1fvra_ 88 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK-QFIHRDLAARNILVGENYVA 166 (309)
T ss_dssp EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEECGGGCE
T ss_pred EEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcC-CccccccccceEEEcCCCce
Confidence 999999999999999643 235799999999999999999999999 99999999999999999999
Q ss_pred eeeccCCccccCCC---CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCC-CCchhhHHhhhccccccccc
Q 011519 196 RLSCFGLMKNSRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHI-PPSHALDLIRDRNIQTLTDS 271 (484)
Q Consensus 196 kl~DfG~a~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p-~~~~~~~~~~~~~~~~~~~~ 271 (484)
||+|||+++..... ....||+.|+|||.+.++.++.++|||||||++|||++|..| +.......+..... .
T Consensus 167 kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~-----~ 241 (309)
T d1fvra_ 167 KIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP-----Q 241 (309)
T ss_dssp EECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGG-----G
T ss_pred EEccccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHHH-----h
Confidence 99999999765432 345688999999999999999999999999999999998765 43322222211111 1
Q ss_pred cccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhcCC
Q 011519 272 CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (484)
Q Consensus 272 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 317 (484)
..+...+..+++++.+||.+||+.||++|||+.+|+++|+.+.+..
T Consensus 242 ~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~~~ 287 (309)
T d1fvra_ 242 GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER 287 (309)
T ss_dssp TCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred cCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcC
Confidence 1223455667889999999999999999999999999999987654
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-52 Score=405.38 Aligned_cols=249 Identities=16% Similarity=0.136 Sum_probs=201.9
Q ss_pred Cccccccc-CCCCCCceEEEEE-eCCCcEEEEEEecCCCCccHHHHHHHHHHHhcC-CCCceeeeeeeeee----CCceE
Q 011519 57 AMENIVSE-HGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQL-RNRRLANLLGCCCE----GDERL 129 (484)
Q Consensus 57 ~~~~~~~~-lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~l~~~~~~----~~~~~ 129 (484)
++|+++++ ||+|+||+||+|+ ..+++.||||+++. ...+.+|+.++.++ +|||||+++++|.+ ...+|
T Consensus 11 ~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~-----~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~ 85 (335)
T d2ozaa1 11 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 85 (335)
T ss_dssp GTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECC-----cHHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEE
Confidence 46788865 9999999999999 46799999999863 35678999987654 89999999999865 45689
Q ss_pred EEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecC---CCCceeeccCCcccc
Q 011519 130 LVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD---DVNPRLSCFGLMKNS 206 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~---~~~~kl~DfG~a~~~ 206 (484)
||||||+||+|.++|.......+++.++..|+.||+.||.|||+. ||+||||||+|||++. ++.+||+|||+++..
T Consensus 86 ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~-~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~ 164 (335)
T d2ozaa1 86 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI-NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET 164 (335)
T ss_dssp EEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred EEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHc-CCccccccccccccccccccccccccccceeeec
Confidence 999999999999999765556799999999999999999999999 9999999999999985 567999999999875
Q ss_pred CCC---CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccc--cCCCChHH
Q 011519 207 RDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCL--EGQFSSDE 281 (484)
Q Consensus 207 ~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 281 (484)
... ....||+.|+|||++.+..++.++|||||||++|+|+||+.||.+.............+..... .......+
T Consensus 165 ~~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 244 (335)
T d2ozaa1 165 TSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEV 244 (335)
T ss_dssp CCCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCSSSCCTTHHHHS
T ss_pred cCCCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCcccccC
Confidence 443 4567999999999999889999999999999999999999998754322111111111111111 01111346
Q ss_pred HHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 282 GTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 282 ~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
++++.+||.+||+.||++|||+.++++|-+
T Consensus 245 s~~~~~li~~~L~~dP~~R~s~~eil~hp~ 274 (335)
T d2ozaa1 245 SEEVKMLIRNLLKTEPTQRMTITEFMNHPW 274 (335)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCHHHHHHSHH
T ss_pred CHHHHHHHHHHccCChhHCcCHHHHHcCHH
Confidence 788999999999999999999999999844
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.8e-53 Score=398.01 Aligned_cols=251 Identities=21% Similarity=0.284 Sum_probs=199.0
Q ss_pred CCcccccccCCCCCCceEEEEEe--CCC--cEEEEEEecCCCC---ccHHHHHHHHHHHhcCCCCceeeeeeeeeeCCce
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKL--ENQ--FRIAVKRFNRSAW---PDARQFLEEARAVGQLRNRRLANLLGCCCEGDER 128 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~--~~~--~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~ 128 (484)
..+|+++++||+|+||+||+|+. .++ ..||||+++.... ...++|.+|+.+|++++|||||+++|++.+ +..
T Consensus 7 ~~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~ 85 (273)
T d1u46a_ 7 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPM 85 (273)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSC
T ss_pred hHHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cch
Confidence 45789999999999999999984 222 4789999976432 235679999999999999999999999965 567
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC
Q 011519 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 208 (484)
Q Consensus 129 ~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~ 208 (484)
++||||+++|+|.+++.. ..+.+++..++.++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 86 ~lv~e~~~~~~l~~~~~~-~~~~l~~~~~~~~~~qi~~gl~ylH~~-~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~ 163 (273)
T d1u46a_ 86 KMVTELAPLGSLLDRLRK-HQGHFLLGTLSRYAVQVAEGMGYLESK-RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 163 (273)
T ss_dssp EEEEECCTTCBHHHHHHH-HGGGSCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred heeeeeecCcchhhhhhc-ccCCCCHHHHHHHHHHHHHHHHHhhhC-CEeeeeecHHHhccccccceeeccchhhhhccc
Confidence 899999999999998864 345699999999999999999999998 999999999999999999999999999987644
Q ss_pred C-------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccccccccccccCCCChH
Q 011519 209 G-------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSD 280 (484)
Q Consensus 209 ~-------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (484)
. ....|++.|+|||++.+..++.++|||||||++|||+| |..||............ .....+...+..
T Consensus 164 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i----~~~~~~~~~~~~ 239 (273)
T d1u46a_ 164 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI----DKEGERLPRPED 239 (273)
T ss_dssp -CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHH----HTSCCCCCCCTT
T ss_pred CCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHH----HhCCCCCCCccc
Confidence 3 23456789999999999999999999999999999998 78887654333322111 111222234556
Q ss_pred HHHHHHHHHHHHhccCCCCCCChHHHHHHHHhh
Q 011519 281 EGTELVRLASRCLQYEPRERPNPRSLVTALVTL 313 (484)
Q Consensus 281 ~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~ 313 (484)
+++.+.+|+.+||+.||++|||+.+|++.|+..
T Consensus 240 ~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~~ 272 (273)
T d1u46a_ 240 CPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA 272 (273)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 678999999999999999999999999998765
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=8.3e-53 Score=411.32 Aligned_cols=249 Identities=17% Similarity=0.139 Sum_probs=203.6
Q ss_pred CCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCc---cHHHHHH---HHHHHhcCCCCceeeeeeeeeeCCce
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP---DARQFLE---EARAVGQLRNRRLANLLGCCCEGDER 128 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~---E~~~l~~l~hpniv~l~~~~~~~~~~ 128 (484)
.++|++++.||+|+||+||+|+. .+|+.||||++...... ....+.+ ++.+++.++|||||++++++.+.+..
T Consensus 3 lddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~ 82 (364)
T d1omwa3 3 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 82 (364)
T ss_dssp STTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred HHhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEE
Confidence 35788999999999999999994 57999999998643211 1223444 47778888999999999999999999
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC
Q 011519 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 208 (484)
Q Consensus 129 ~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~ 208 (484)
|||||||+||+|.++|. ....+++..++.++.||+.||.|||+. |||||||||+|||++.+|.+||+|||+++....
T Consensus 83 ~ivmE~~~gg~L~~~l~--~~~~~~e~~~~~~~~qi~~aL~ylH~~-~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~ 159 (364)
T d1omwa3 83 SFILDLMNGGDLHYHLS--QHGVFSEADMRFYAAEIILGLEHMHNR-FVVYRDLKPANILLDEHGHVRISDLGLACDFSK 159 (364)
T ss_dssp EEEECCCCSCBHHHHHH--HHCSCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECSSSCEEECCCTTCEECSS
T ss_pred EEEEEecCCCcHHHHHH--hcccccHHHHHHHHHHHHHHHHHHHHC-CccceeeccceeEEcCCCcEEEeeeceeeecCC
Confidence 99999999999999997 345789999999999999999999999 999999999999999999999999999987654
Q ss_pred C--CcccCCCCCCCcccccC-CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHH
Q 011519 209 G--RSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTEL 285 (484)
Q Consensus 209 ~--~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 285 (484)
. ....||+.|+|||++.. ..++.++|||||||++|||+||+.||.......... ...... .....++..+++++
T Consensus 160 ~~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~-~~~~~~--~~~~~~~~~~s~~~ 236 (364)
T d1omwa3 160 KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE-IDRMTL--TMAVELPDSFSPEL 236 (364)
T ss_dssp SCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHH-HHHHSS--SCCCCCCSSSCHHH
T ss_pred CcccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHhcc--cCCCCCCCCCCHHH
Confidence 3 45679999999999975 468999999999999999999999986532211100 000000 01123455677899
Q ss_pred HHHHHHHhccCCCCCCC-----hHHHHHHH
Q 011519 286 VRLASRCLQYEPRERPN-----PRSLVTAL 310 (484)
Q Consensus 286 ~~li~~cl~~dp~~Rps-----~~~il~~l 310 (484)
.+||.+||+.||.+||| ++++++|-
T Consensus 237 ~~li~~~L~~dP~~R~t~~~~~a~eil~Hp 266 (364)
T d1omwa3 237 RSLLEGLLQRDVNRRLGCLGRGAQEVKESP 266 (364)
T ss_dssp HHHHHHHTCSSTTTSTTTSSSTHHHHHTSG
T ss_pred HHHHHHHcccCHHHhCCCcccCHHHHHcCc
Confidence 99999999999999999 69999883
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.1e-53 Score=402.00 Aligned_cols=255 Identities=20% Similarity=0.247 Sum_probs=197.9
Q ss_pred CCcccccccCCCCCCceEEEEEeC------CCcEEEEEEecCCCCc-cHHHHHHHHHHHhcC-CCCceeeeeeeeeeC-C
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWP-DARQFLEEARAVGQL-RNRRLANLLGCCCEG-D 126 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~-~ 126 (484)
.++|++++.||+|+||+||+|... +++.||||+++..... ..+.+.+|...+.++ +|+|||.+++++... .
T Consensus 12 ~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~ 91 (299)
T d1ywna1 12 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 91 (299)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTS
T ss_pred HHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCC
Confidence 357889999999999999999842 3468999999765433 356788888888887 689999999998765 4
Q ss_pred ceEEEEecCCCCCHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCC
Q 011519 127 ERLLVAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 192 (484)
Q Consensus 127 ~~~lv~Ey~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~ 192 (484)
..++|||||++|+|.++|.... ...+++.+++.++.||+.||.|||++ +||||||||+||||+++
T Consensus 92 ~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~-~ivHrDlKp~NILl~~~ 170 (299)
T d1ywna1 92 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR-KCIHRDLAARNILLSEK 170 (299)
T ss_dssp CCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECGG
T ss_pred eEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhC-CCcCCcCCccceeECCC
Confidence 6899999999999999996432 23589999999999999999999999 99999999999999999
Q ss_pred CCceeeccCCccccCCC------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCC-CCCchhhHHhhhccc
Q 011519 193 VNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKH-IPPSHALDLIRDRNI 265 (484)
Q Consensus 193 ~~~kl~DfG~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~-p~~~~~~~~~~~~~~ 265 (484)
+++||+|||+++..... ....||+.|+|||++.++.++.++|||||||++|||+||.. ||.........
T Consensus 171 ~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~---- 246 (299)
T d1ywna1 171 NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF---- 246 (299)
T ss_dssp GCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHH----
T ss_pred CcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHHHH----
Confidence 99999999999865432 24568999999999999999999999999999999999865 44332111110
Q ss_pred cccccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhc
Q 011519 266 QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 315 (484)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~ 315 (484)
............+...++++.+|+.+||+.||++|||+.+|+++|+.+.+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~ilq 296 (299)
T d1ywna1 247 CRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 296 (299)
T ss_dssp HHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHhcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 01111111223455667899999999999999999999999999998753
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-52 Score=403.49 Aligned_cols=244 Identities=18% Similarity=0.232 Sum_probs=207.0
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCC---CccHHHHHHHHHHHh-cCCCCceeeeeeeeeeCCceEEE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSA---WPDARQFLEEARAVG-QLRNRRLANLLGCCCEGDERLLV 131 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~-~l~hpniv~l~~~~~~~~~~~lv 131 (484)
++|++++.||+|+||+||+|+. .+++.||||+++... ....+.+..|..++. .++|||||++++++.+++..|||
T Consensus 2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv 81 (320)
T d1xjda_ 2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV 81 (320)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence 4688999999999999999994 579999999996432 223556777877765 68999999999999999999999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC--
Q 011519 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG-- 209 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~-- 209 (484)
|||++||+|.+++. ..+.+++.++..++.||+.||.|||++ ||+||||||+|||+++++.+||+|||+++.....
T Consensus 82 mEy~~~g~L~~~i~--~~~~~~e~~~~~~~~qi~~al~ylH~~-~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~~ 158 (320)
T d1xjda_ 82 MEYLNGGDLMYHIQ--SCHKFDLSRATFYAAEIILGLQFLHSK-GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA 158 (320)
T ss_dssp EECCTTCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC
T ss_pred EeecCCCcHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeccCcccceeecCCCceeccccchhhhcccccc
Confidence 99999999999997 445689999999999999999999999 9999999999999999999999999999865432
Q ss_pred --CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHH
Q 011519 210 --RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVR 287 (484)
Q Consensus 210 --~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 287 (484)
....||+.|+|||++.+..++.++|||||||++|||+||+.||.+............. ...+|..+++++.+
T Consensus 159 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~------~~~~p~~~s~~~~d 232 (320)
T d1xjda_ 159 KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMD------NPFYPRWLEKEAKD 232 (320)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC------CCCCCTTSCHHHHH
T ss_pred cccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHcC------CCCCCccCCHHHHH
Confidence 3467899999999999999999999999999999999999999765433322221111 12345567789999
Q ss_pred HHHHHhccCCCCCCChH-HHHHH
Q 011519 288 LASRCLQYEPRERPNPR-SLVTA 309 (484)
Q Consensus 288 li~~cl~~dp~~Rps~~-~il~~ 309 (484)
||.+||..||.+|||+. ++++|
T Consensus 233 li~~~L~~dP~~R~s~~~~l~~h 255 (320)
T d1xjda_ 233 LLVKLFVREPEKRLGVRGDIRQH 255 (320)
T ss_dssp HHHHHSCSSGGGSBTTBSCGGGS
T ss_pred HHHHhcccCCCCCcCHHHHHHhC
Confidence 99999999999999996 78776
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-51 Score=395.14 Aligned_cols=249 Identities=22% Similarity=0.310 Sum_probs=203.6
Q ss_pred ccCCCCCCceEEEEEeCC----CcEEEEEEecCCCC-ccHHHHHHHHHHHhcCCCCceeeeeeeeee-CCceEEEEecCC
Q 011519 63 SEHGEKAPNVVYKGKLEN----QFRIAVKRFNRSAW-PDARQFLEEARAVGQLRNRRLANLLGCCCE-GDERLLVAEYMP 136 (484)
Q Consensus 63 ~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~~~~~lv~Ey~~ 136 (484)
+.||+|+||+||+|++.+ ...||||+++.... ...++|.+|+++|++++|||||+++|++.. ++..++|||||+
T Consensus 33 ~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~~ 112 (311)
T d1r0pa_ 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMK 112 (311)
T ss_dssp EEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECCT
T ss_pred eEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEee
Confidence 457999999999999533 23689999975432 345789999999999999999999999876 457899999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC-------
Q 011519 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG------- 209 (484)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~------- 209 (484)
+|+|.+++.. ....+++..++.++.|++.||.|||+. +|+||||||+|||+++++.+||+|||+++.....
T Consensus 113 ~g~l~~~~~~-~~~~~~~~~~~~i~~qia~gL~~lH~~-~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~~~~ 190 (311)
T d1r0pa_ 113 HGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKFLASK-KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHN 190 (311)
T ss_dssp TCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCCTTC
T ss_pred cCchhhhhcc-ccccchHHHHHHHHHHHHHhhhhhccc-CcccCCccHHhEeECCCCCEEEecccchhhcccccccccee
Confidence 9999999864 445688999999999999999999999 9999999999999999999999999999865432
Q ss_pred -CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHHHHHHHH
Q 011519 210 -RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEGTELVRL 288 (484)
Q Consensus 210 -~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 288 (484)
....||+.|+|||.+.++.++.++||||||+++|||+||+.||........ .........+...|..+++.+.+|
T Consensus 191 ~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~----~~~~i~~g~~~~~p~~~~~~l~~l 266 (311)
T d1r0pa_ 191 KTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD----ITVYLLQGRRLLQPEYCPDPLYEV 266 (311)
T ss_dssp TTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC----------CHHHHHTTCCCCCCTTCCHHHHHH
T ss_pred cccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHH----HHHHHHcCCCCCCcccCcHHHHHH
Confidence 234578999999999999999999999999999999998888765422110 111111111223445567889999
Q ss_pred HHHHhccCCCCCCChHHHHHHHHhhhcCC
Q 011519 289 ASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (484)
Q Consensus 289 i~~cl~~dp~~Rps~~~il~~l~~~~~~~ 317 (484)
+.+||+.||++|||+.||+++|+.+....
T Consensus 267 i~~cl~~dP~~RPs~~ei~~~L~~i~~~~ 295 (311)
T d1r0pa_ 267 MLKCWHPKAEMRPSFSELVSRISAIFSTF 295 (311)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHHHTC
T ss_pred HHHHcCCCHhHCcCHHHHHHHHHHHHHhh
Confidence 99999999999999999999999997653
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.4e-52 Score=397.20 Aligned_cols=248 Identities=19% Similarity=0.195 Sum_probs=196.6
Q ss_pred ccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCcc-----HHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEec
Q 011519 61 IVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPD-----ARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (484)
Q Consensus 61 ~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~-----~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey 134 (484)
.|+.||+|+||+||+|+ ..+|+.||||+++...... .+.+.+|+.+|++++|||||++++++...+..+|||||
T Consensus 2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~ 81 (299)
T d1ua2a_ 2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDF 81 (299)
T ss_dssp EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEEC
T ss_pred cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhh
Confidence 45678999999999999 4679999999997543222 34689999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----C
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----R 210 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~----~ 210 (484)
+.++++..++. .+..+++..+..++.||+.||+|||++ ||+||||||+|||++.++.+||+|||+++..... .
T Consensus 82 ~~~~~~~~~~~--~~~~l~~~~~~~~~~qil~aL~~lH~~-~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~~~~ 158 (299)
T d1ua2a_ 82 METDLEVIIKD--NSLVLTPSHIKAYMLMTLQGLEYLHQH-WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYT 158 (299)
T ss_dssp CSEEHHHHHTT--CCSSCCSSHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCCC
T ss_pred hcchHHhhhhh--cccCCCHHHHHHHHHHHHHHHHHhhcc-ceecccCCcceEEecCCCccccccCccccccCCCccccc
Confidence 99887776664 456799999999999999999999998 9999999999999999999999999999875442 3
Q ss_pred cccCCCCCCCcccccCC-CCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcccc--------ccc------cccccC
Q 011519 211 SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQ--------TLT------DSCLEG 275 (484)
Q Consensus 211 ~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~--------~~~------~~~~~~ 275 (484)
...||+.|+|||++.+. .++.++|||||||++|||+||..||.............. ... ......
T Consensus 159 ~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (299)
T d1ua2a_ 159 HQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFK 238 (299)
T ss_dssp CSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCC
T ss_pred ceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhhhc
Confidence 45789999999998755 579999999999999999999988875432211110000 000 000000
Q ss_pred ---C-----CChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 276 ---Q-----FSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 276 ---~-----~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
. .....++++.+|+.+||+.||++|||++|+++|-+
T Consensus 239 ~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~Hp~ 282 (299)
T d1ua2a_ 239 SFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKY 282 (299)
T ss_dssp CCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGG
T ss_pred cCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCCHh
Confidence 0 01234678999999999999999999999998743
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.9e-52 Score=394.13 Aligned_cols=253 Identities=21% Similarity=0.302 Sum_probs=206.5
Q ss_pred CcccccccCCCCCCceEEEEEe-CC-------CcEEEEEEecCCCCcc-HHHHHHHHHHHhcC-CCCceeeeeeeeeeCC
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-EN-------QFRIAVKRFNRSAWPD-ARQFLEEARAVGQL-RNRRLANLLGCCCEGD 126 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~-------~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~ 126 (484)
++|++++.||+|+||.||+|+. .. +..||||+++...... ...+.+|+..+.++ +|||||+++++|.+.+
T Consensus 13 ~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~~ 92 (299)
T d1fgka_ 13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 92 (299)
T ss_dssp GGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccCC
Confidence 6788999999999999999984 22 3479999997655433 56789999999888 7999999999999999
Q ss_pred ceEEEEecCCCCCHHhhhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCC
Q 011519 127 ERLLVAEYMPNDTLAKHLFHWE--------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 192 (484)
Q Consensus 127 ~~~lv~Ey~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~ 192 (484)
..++||||+++|+|.++|.... ...+++.+++.++.||+.||+|||+. +||||||||+|||++.+
T Consensus 93 ~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~-~ivHrDiKp~NiLl~~~ 171 (299)
T d1fgka_ 93 PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK-KCIHRDLAARNVLVTED 171 (299)
T ss_dssp SCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEECTT
T ss_pred eEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhC-CEEeeeecccceeecCC
Confidence 9999999999999999996432 24589999999999999999999999 99999999999999999
Q ss_pred CCceeeccCCccccCCC------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhh-CCCCCCchhhHHhhhccc
Q 011519 193 VNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLS-GKHIPPSHALDLIRDRNI 265 (484)
Q Consensus 193 ~~~kl~DfG~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~~~ 265 (484)
+.+||+|||+++..... ....+|+.|+|||.+.++.++.++|||||||++|||+| |..||.....+....
T Consensus 172 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~~~~--- 248 (299)
T d1fgka_ 172 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK--- 248 (299)
T ss_dssp CCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHH---
T ss_pred CCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHHHHHH---
Confidence 99999999999865432 33567889999999999999999999999999999998 566665443322211
Q ss_pred cccccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhc
Q 011519 266 QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 315 (484)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~ 315 (484)
.+........+..+++++.+|+.+||+.||.+|||+.+|++.|+.+..
T Consensus 249 --~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~a 296 (299)
T d1fgka_ 249 --LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 296 (299)
T ss_dssp --HHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --HHHcCCCCCCCccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHhh
Confidence 111222334556677899999999999999999999999999988753
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.2e-51 Score=388.30 Aligned_cols=251 Identities=17% Similarity=0.233 Sum_probs=200.8
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCc--cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEe
Q 011519 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 133 (484)
++|++++.||+|+||+||+|+ ..+|+.||||+++..... ..+++.+|+.+|++++|||||++++++.+++..++|||
T Consensus 2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e 81 (298)
T d1gz8a_ 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 81 (298)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEe
Confidence 468899999999999999999 467999999999754322 25679999999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----
Q 011519 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 209 (484)
Q Consensus 134 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~---- 209 (484)
|+.+ ++.+++.......+++..+..++.||+.||.|||++ |||||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~~~~-~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~-~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~~~~ 159 (298)
T d1gz8a_ 82 FLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH-RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY 159 (298)
T ss_dssp CCSE-EHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCSBCT
T ss_pred ecCC-chhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcC-CEEccccCchheeecccCcceeccCCcceeccCCcccc
Confidence 9966 555555544566799999999999999999999998 9999999999999999999999999999765432
Q ss_pred CcccCCCCCCCcccccCCC-CCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccc-------cccccc-----cccCC
Q 011519 210 RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI-------QTLTDS-----CLEGQ 276 (484)
Q Consensus 210 ~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~-------~~~~~~-----~~~~~ 276 (484)
....||+.|+|||++.... ++.++|||||||++|+|++|+.||............. ...... .....
T Consensus 160 ~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 239 (298)
T d1gz8a_ 160 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 239 (298)
T ss_dssp TCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTT
T ss_pred eeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhccccccccccccc
Confidence 3457899999999987665 5789999999999999999999987542211100000 000000 00000
Q ss_pred -----------CChHHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 277 -----------FSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 277 -----------~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
.....++++.+|+.+||..||++|||++|+++|
T Consensus 240 ~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H 283 (298)
T d1gz8a_ 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 283 (298)
T ss_dssp SCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 012345789999999999999999999999998
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.6e-51 Score=391.72 Aligned_cols=253 Identities=21% Similarity=0.309 Sum_probs=208.3
Q ss_pred CcccccccCCCCCCceEEEEEeC------CCcEEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceE
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLE------NQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGDERL 129 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 129 (484)
+++++++.||+|+||+||+|.+. +++.||||+++..... ....|.+|+.++++++|||||++++++...+..+
T Consensus 20 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~ 99 (308)
T d1p4oa_ 20 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL 99 (308)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCE
T ss_pred HHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCcee
Confidence 56788899999999999999852 3578999999765432 2456899999999999999999999999999999
Q ss_pred EEEecCCCCCHHhhhccC--------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccC
Q 011519 130 LVAEYMPNDTLAKHLFHW--------ETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 201 (484)
Q Consensus 130 lv~Ey~~~gsL~~~l~~~--------~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG 201 (484)
+||||+++|+|.+++... ....+++..+..++.|++.||.|||++ +|+||||||+|||++.++++||+|||
T Consensus 100 lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~-~ivHrDlk~~NiLld~~~~~Kl~DFG 178 (308)
T d1p4oa_ 100 VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN-KFVHRDLAARNCMVAEDFTVKIGDFG 178 (308)
T ss_dssp EEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT-TCBCSCCSGGGEEECTTCCEEECCTT
T ss_pred EEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhC-CeeeceEcCCceeecCCceEEEeecc
Confidence 999999999999998632 123578999999999999999999999 99999999999999999999999999
Q ss_pred CccccCCC------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCC-CCchhhHHhhhcccccccccccc
Q 011519 202 LMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHI-PPSHALDLIRDRNIQTLTDSCLE 274 (484)
Q Consensus 202 ~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p-~~~~~~~~~~~~~~~~~~~~~~~ 274 (484)
+++..... ....+|+.|+|||.+.+..++.++||||||+++|||+||..| +............ .+ ...
T Consensus 179 la~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i----~~-~~~ 253 (308)
T d1p4oa_ 179 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV----ME-GGL 253 (308)
T ss_dssp CCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHH----HT-TCC
T ss_pred cceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHHHHHH----Hh-CCC
Confidence 99865432 234578999999999999999999999999999999999644 4333222211111 11 112
Q ss_pred CCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhc
Q 011519 275 GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 315 (484)
Q Consensus 275 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~ 315 (484)
...+..+++.+.+|+.+||+.||++|||+.+|+++|+...+
T Consensus 254 ~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~ 294 (308)
T d1p4oa_ 254 LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 294 (308)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred CCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 23445667899999999999999999999999999987643
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.8e-51 Score=393.19 Aligned_cols=254 Identities=20% Similarity=0.296 Sum_probs=209.3
Q ss_pred CcccccccCCCCCCceEEEEEe------CCCcEEEEEEecCCCCc-cHHHHHHHHHHHhcC-CCCceeeeeeeeeeCCce
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL------ENQFRIAVKRFNRSAWP-DARQFLEEARAVGQL-RNRRLANLLGCCCEGDER 128 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l-~hpniv~l~~~~~~~~~~ 128 (484)
+++++.+.||+|+||.||+|++ .+++.||||+++..... ....|.+|+.+++.+ +|||||++++++.+.+..
T Consensus 23 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~~ 102 (311)
T d1t46a_ 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPT 102 (311)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCEE
Confidence 4778888999999999999984 34678999999865433 355799999999999 699999999999999999
Q ss_pred EEEEecCCCCCHHhhhccCC----------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCC
Q 011519 129 LLVAEYMPNDTLAKHLFHWE----------------TQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDD 192 (484)
Q Consensus 129 ~lv~Ey~~~gsL~~~l~~~~----------------~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~ 192 (484)
+||||||++|+|.+++.... ...+++..+..++.||+.||.|||++ ++|||||||+|||++.+
T Consensus 103 ~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~-~ivHrDLKp~NIl~~~~ 181 (311)
T d1t46a_ 103 LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK-NCIHRDLAARNILLTHG 181 (311)
T ss_dssp EEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCSGGGEEEETT
T ss_pred EEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC-Ceeeccccccccccccc
Confidence 99999999999999996432 23589999999999999999999999 99999999999999999
Q ss_pred CCceeeccCCccccCCC------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCC-chhhHHhhhccc
Q 011519 193 VNPRLSCFGLMKNSRDG------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPP-SHALDLIRDRNI 265 (484)
Q Consensus 193 ~~~kl~DfG~a~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~-~~~~~~~~~~~~ 265 (484)
+.+||+|||+++..... ....||+.|+|||++.++.++.++|||||||++|||+|++.|+. ....... +
T Consensus 182 ~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~----~ 257 (311)
T d1t46a_ 182 RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK----F 257 (311)
T ss_dssp TEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH----H
T ss_pred CcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHH----H
Confidence 99999999999876543 23467899999999999999999999999999999999555543 2211111 1
Q ss_pred cccccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhc
Q 011519 266 QTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQK 315 (484)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~ 315 (484)
..+.....+...+...++.+.+||.+||+.||.+|||+.+|++.|+++..
T Consensus 258 ~~~i~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i~ 307 (311)
T d1t46a_ 258 YKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQIS 307 (311)
T ss_dssp HHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHhcCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhhc
Confidence 11111222233445567899999999999999999999999999987544
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=1.1e-50 Score=384.99 Aligned_cols=250 Identities=16% Similarity=0.211 Sum_probs=202.6
Q ss_pred CcccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCc--cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEec
Q 011519 57 AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAEY 134 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~Ey 134 (484)
++|+++++||+|+||+||+|+..+|+.||||+++..... ..+++.+|+.+|++++|||||++++++.+.+..+++|||
T Consensus 2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~ 81 (286)
T d1ob3a_ 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (286)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEe
Confidence 478899999999999999999889999999999765432 256899999999999999999999999999999999999
Q ss_pred CCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----C
Q 011519 135 MPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG----R 210 (484)
Q Consensus 135 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~----~ 210 (484)
+.++++..+.. ..+.+++..+..++.||+.||+|||+. +||||||||+|||++.++.+||+|||++...... .
T Consensus 82 ~~~~~~~~~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~-~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~ 158 (286)
T d1ob3a_ 82 LDQDLKKLLDV--CEGGLESVTAKSFLLQLLNGIAYCHDR-RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYT 158 (286)
T ss_dssp CSEEHHHHHHT--STTCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC------
T ss_pred ehhhhHHHHHh--hcCCcchhhhHHHHHHHHHHHHHhccC-cEEecCCCCceeeEcCCCCEEecccccceecccCccccc
Confidence 98876666654 456799999999999999999999998 9999999999999999999999999998775442 3
Q ss_pred cccCCCCCCCcccccCC-CCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccc--------------ccc-------
Q 011519 211 SYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI--------------QTL------- 268 (484)
Q Consensus 211 ~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~--------------~~~------- 268 (484)
...+++.|+|||.+.+. .++.++|||||||++|||++|+.||............. ...
T Consensus 159 ~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (286)
T d1ob3a_ 159 HEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNF 238 (286)
T ss_dssp ---CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTC
T ss_pred eecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhccccc
Confidence 45688999999998764 47899999999999999999999986532211110000 000
Q ss_pred --ccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 269 --TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 269 --~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
........+....++.+.+|+.+||+.||++|||++|+++|
T Consensus 239 ~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~H 281 (286)
T d1ob3a_ 239 TVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (286)
T ss_dssp CCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 00000011233456889999999999999999999999987
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-51 Score=388.56 Aligned_cols=239 Identities=19% Similarity=0.268 Sum_probs=200.7
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCc------cHHHHHHHHHHHhcCC--CCceeeeeeeeeeCCc
Q 011519 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP------DARQFLEEARAVGQLR--NRRLANLLGCCCEGDE 127 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~--hpniv~l~~~~~~~~~ 127 (484)
++|++.+.||+|+||+||+|+ ..+|+.||||+++..... ...++.+|+.+|++++ |||||++++++.+.+.
T Consensus 4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~ 83 (273)
T d1xwsa_ 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS 83 (273)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCe
Confidence 368888999999999999999 467999999999653221 1234778999999986 8999999999999999
Q ss_pred eEEEEecCCC-CCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecC-CCCceeeccCCccc
Q 011519 128 RLLVAEYMPN-DTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-DVNPRLSCFGLMKN 205 (484)
Q Consensus 128 ~~lv~Ey~~~-gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~-~~~~kl~DfG~a~~ 205 (484)
.++||||+.+ +++.+++. ....+++.++..++.||+.||.|||++ ||+||||||+|||++. ++.+||+|||+++.
T Consensus 84 ~~lv~e~~~~~~~l~~~~~--~~~~l~e~~~~~~~~qi~~al~~lH~~-~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~ 160 (273)
T d1xwsa_ 84 FVLILERPEPVQDLFDFIT--ERGALQEELARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSGAL 160 (273)
T ss_dssp EEEEEECCSSEEEHHHHHH--HHCSCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEEEEEeccCcchHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHC-CCccccCcccceEEecCCCeEEECcccccee
Confidence 9999999976 68888886 345799999999999999999999999 9999999999999985 57899999999987
Q ss_pred cCCC--CcccCCCCCCCcccccCCCC-CCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCChHHH
Q 011519 206 SRDG--RSYSTNLAFTPPEYLRTGRV-TPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSSDEG 282 (484)
Q Consensus 206 ~~~~--~~~~~t~~y~aPE~~~~~~~-~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (484)
.... ....||+.|+|||++.+..+ +.++|||||||++|||+||+.||..... +.... ..++...+
T Consensus 161 ~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~--i~~~~----------~~~~~~~s 228 (273)
T d1xwsa_ 161 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE--IIRGQ----------VFFRQRVS 228 (273)
T ss_dssp CCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH--HHHCC----------CCCSSCCC
T ss_pred cccccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCchH--Hhhcc----------cCCCCCCC
Confidence 5543 45689999999999987665 5678999999999999999998875421 11111 12344567
Q ss_pred HHHHHHHHHHhccCCCCCCChHHHHHHH
Q 011519 283 TELVRLASRCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 283 ~~l~~li~~cl~~dp~~Rps~~~il~~l 310 (484)
+++.+||.+||+.||++|||++|+++|-
T Consensus 229 ~~~~~li~~~L~~dp~~R~s~~eil~hp 256 (273)
T d1xwsa_ 229 SECQHLIRWCLALRPSDRPTFEEIQNHP 256 (273)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHTSG
T ss_pred HHHHHHHHHHccCCHhHCcCHHHHhcCH
Confidence 8899999999999999999999999873
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-50 Score=386.15 Aligned_cols=253 Identities=15% Similarity=0.206 Sum_probs=194.3
Q ss_pred cccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHH--HHHHhcCCCCceeeeeeeeeeCC----ceEEE
Q 011519 58 MENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEE--ARAVGQLRNRRLANLLGCCCEGD----ERLLV 131 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E--~~~l~~l~hpniv~l~~~~~~~~----~~~lv 131 (484)
++-+.++||+|+||+||+|++ +|+.||||+++.. ..+.+.+| +..+..++|||||++++++.+.+ .++||
T Consensus 4 ~~~l~~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~---~~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv 79 (303)
T d1vjya_ 4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 79 (303)
T ss_dssp GEEEEEEEECCSSSEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECcc---chhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEE
Confidence 345567789999999999997 5789999999643 23444444 44556789999999999998654 57999
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcC-------CCcccccccccceeecCCCCceeeccCCcc
Q 011519 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSK-------ERALYHDLNAYRIVFDDDVNPRLSCFGLMK 204 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~-------~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~ 204 (484)
|||+++|+|.++|++ ..++|..++.++.|++.||.|||+. .|||||||||+||||+.++.+||+|||+++
T Consensus 80 ~Ey~~~g~L~~~l~~---~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~ 156 (303)
T d1vjya_ 80 SDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 156 (303)
T ss_dssp EECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred EecccCCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCccc
Confidence 999999999999964 3699999999999999999999962 399999999999999999999999999988
Q ss_pred ccCCC--------CcccCCCCCCCcccccCCC------CCCCCceeehHHHHHHHhhCCCCCCchhhHHhh---------
Q 011519 205 NSRDG--------RSYSTNLAFTPPEYLRTGR------VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIR--------- 261 (484)
Q Consensus 205 ~~~~~--------~~~~~t~~y~aPE~~~~~~------~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~--------- 261 (484)
..... ....||+.|+|||++.+.. ++.++|||||||++|||+||..|+.........
T Consensus 157 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~ 236 (303)
T d1vjya_ 157 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 236 (303)
T ss_dssp EEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSC
T ss_pred cccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccc
Confidence 65332 2457899999999987542 577899999999999999998765321100000
Q ss_pred --hccccccccccccCCC-----ChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhcCC
Q 011519 262 --DRNIQTLTDSCLEGQF-----SSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKDT 317 (484)
Q Consensus 262 --~~~~~~~~~~~~~~~~-----~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~~ 317 (484)
............+..+ +......+.+|+.+||+.||++|||+.+|++.|..+..+.
T Consensus 237 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~~ 299 (303)
T d1vjya_ 237 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp CHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHhc
Confidence 0000011111111112 2235567999999999999999999999999999887653
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.5e-50 Score=385.42 Aligned_cols=251 Identities=18% Similarity=0.192 Sum_probs=198.2
Q ss_pred CcccccccCCCCCCceEEEEEe-CC-CcEEEEEEecCCCC--ccHHHHHHHHHHHhcC---CCCceeeeeeeeee-----
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-EN-QFRIAVKRFNRSAW--PDARQFLEEARAVGQL---RNRRLANLLGCCCE----- 124 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~-~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~hpniv~l~~~~~~----- 124 (484)
++|+++++||+|+||+||+|+. .+ ++.||||+++.... .....+.+|+.+|+.| +||||++++++|..
T Consensus 7 ~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~~ 86 (305)
T d1blxa_ 7 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 86 (305)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSS
T ss_pred CCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeeccccccc
Confidence 5789999999999999999995 44 66799999864322 1233566788777665 79999999999853
Q ss_pred CCceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCcc
Q 011519 125 GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMK 204 (484)
Q Consensus 125 ~~~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~ 204 (484)
....+++|||++++++..... .....+++..+..++.||+.||+|||++ +||||||||+|||++.++.+||+|||+++
T Consensus 87 ~~~~~~~~e~~~~~~~~~~~~-~~~~~~~~~~~~~~~~qi~~aL~yLH~~-~ivHrDiKp~NILi~~~~~~kl~dfg~~~ 164 (305)
T d1blxa_ 87 ETKLTLVFEHVDQDLTTYLDK-VPEPGVPTETIKDMMFQLLRGLDFLHSH-RVVHRDLKPQNILVTSSGQIKLADFGLAR 164 (305)
T ss_dssp EEEEEEEEECCSCBHHHHHHH-SCTTCSCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTCCEEECSCCSCC
T ss_pred CceEEEEEEeccCCchhhhhh-ccCCCCCHHHHHHHHHHHHHHHHHHHhC-CEEecCCCccEEEEcCCCCeeecchhhhh
Confidence 346899999998876654443 3556799999999999999999999999 99999999999999999999999999988
Q ss_pred ccCCC---CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccc--------c-----
Q 011519 205 NSRDG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQT--------L----- 268 (484)
Q Consensus 205 ~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~--------~----- 268 (484)
..... ....||+.|+|||++.+..++.++|||||||++|||+||+.||............... .
T Consensus 165 ~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 244 (305)
T d1blxa_ 165 IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVA 244 (305)
T ss_dssp CCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCS
T ss_pred hhcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhccccccc
Confidence 65432 4678899999999999999999999999999999999999998754322111100000 0
Q ss_pred --------ccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 269 --------TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 269 --------~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
........+....++.+.+|+.+||+.||++|||+.|+++|
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~H 293 (305)
T d1blxa_ 245 LPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 293 (305)
T ss_dssp SCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred chhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 00000011234457889999999999999999999999998
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.9e-49 Score=382.05 Aligned_cols=247 Identities=16% Similarity=0.237 Sum_probs=195.7
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCc--cHHHHHHHHHHHhcCCCCceeeeeeeeeeCC------c
Q 011519 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGD------E 127 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~------~ 127 (484)
..|++++.||+|+||+||+|+ ..+|+.||||+++..... ..+.+.+|+.+|+.++|||||+++++|...+ .
T Consensus 18 ~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~~ 97 (346)
T d1cm8a_ 18 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTD 97 (346)
T ss_dssp SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCC
T ss_pred CcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccce
Confidence 478899999999999999999 467999999999765432 2557899999999999999999999997654 4
Q ss_pred eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccC
Q 011519 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 207 (484)
Q Consensus 128 ~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~ 207 (484)
++|||||+ +++|..++. .+.+++..++.++.||+.||.|||++ |||||||||+|||++.++.+||+|||+++...
T Consensus 98 ~~lv~e~~-~~~l~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~-~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~ 172 (346)
T d1cm8a_ 98 FYLVMPFM-GTDLGKLMK---HEKLGEDRIQFLVYQMLKGLRYIHAA-GIIHRDLKPGNLAVNEDCELKILDFGLARQAD 172 (346)
T ss_dssp CEEEEECC-SEEHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEEecc-cccHHHHHH---hccccHHHHHHHHHHHHHHHHHHHhC-CCcccccCcchhhcccccccccccccceeccC
Confidence 79999999 668888774 35699999999999999999999999 99999999999999999999999999998865
Q ss_pred CC-CcccCCCCCCCcccccCC-CCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhc----------------------
Q 011519 208 DG-RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDR---------------------- 263 (484)
Q Consensus 208 ~~-~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~---------------------- 263 (484)
.. ....||+.|+|||++.+. .++.++|||||||++|+|++|+.||...........
T Consensus 173 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (346)
T d1cm8a_ 173 SEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAK 252 (346)
T ss_dssp SSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHH
T ss_pred CccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhh
Confidence 54 456789999999998764 478999999999999999999998865321111000
Q ss_pred ----cccccccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHH
Q 011519 264 ----NIQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA 309 (484)
Q Consensus 264 ----~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~ 309 (484)
.........+ .......++++.+||.+||..||.+|||+.++++|
T Consensus 253 ~~~~~~~~~~~~~~-~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~H 301 (346)
T d1cm8a_ 253 NYMKGLPELEKKDF-ASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 301 (346)
T ss_dssp HHHHHSCCCCCCCG-GGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred hhhccCCcccccch-HHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 0000000000 11223456789999999999999999999999998
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.8e-49 Score=381.17 Aligned_cols=249 Identities=17% Similarity=0.213 Sum_probs=194.5
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCc-cHHHHHHHHHHHhcCCCCceeeeeeeeeeCC----ceEEE
Q 011519 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP-DARQFLEEARAVGQLRNRRLANLLGCCCEGD----ERLLV 131 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~----~~~lv 131 (484)
+|++++.||+|+||+||+|+ ..+|+.||||+++..... ..+++++|+.+|++++||||+++++++.... ..+++
T Consensus 9 rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~l 88 (345)
T d1pmea_ 9 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYL 88 (345)
T ss_dssp TEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEE
T ss_pred CeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEEE
Confidence 58999999999999999999 568999999999764432 3567999999999999999999999987643 23455
Q ss_pred EecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC---
Q 011519 132 AEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD--- 208 (484)
Q Consensus 132 ~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~--- 208 (484)
++|+.+|+|.+++.. +.+++..+..++.||+.||+|||++ |||||||||+|||++.++.+||+|||+++....
T Consensus 89 ~~~~~~g~L~~~l~~---~~l~~~~i~~i~~qil~al~yLH~~-~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~~ 164 (345)
T d1pmea_ 89 VTHLMGADLYKLLKT---QHLSNDHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD 164 (345)
T ss_dssp EEECCCEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGC
T ss_pred EEeecCCchhhhhhc---CCCCHHHHHHHHHHHHHHHHHHHHC-CCcCCCCCcceEEECCCCCEEEcccCceeeccCCCc
Confidence 566779999999953 4699999999999999999999999 999999999999999999999999999976433
Q ss_pred ----CCcccCCCCCCCcccccC-CCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcccccc---------------
Q 011519 209 ----GRSYSTNLAFTPPEYLRT-GRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL--------------- 268 (484)
Q Consensus 209 ----~~~~~~t~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~--------------- 268 (484)
.....||+.|+|||++.. ..++.++||||+||++|+|++|+.||................
T Consensus 165 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (345)
T d1pmea_ 165 HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLK 244 (345)
T ss_dssp BCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHH
T ss_pred cceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhhh
Confidence 234568999999999855 457889999999999999999999986542211110000000
Q ss_pred -------cccccc---CCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHH
Q 011519 269 -------TDSCLE---GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 269 -------~~~~~~---~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 310 (484)
...... .......++++.+|+.+||..||.+|||+.++++|-
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~hp 296 (345)
T d1pmea_ 245 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 296 (345)
T ss_dssp HHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSG
T ss_pred hhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcCH
Confidence 000000 001123457899999999999999999999999883
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-48 Score=375.79 Aligned_cols=254 Identities=16% Similarity=0.162 Sum_probs=197.9
Q ss_pred CCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCC--ccHHHHHHHHHHHhcCCCCceeeeeeeeee-------
Q 011519 55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAW--PDARQFLEEARAVGQLRNRRLANLLGCCCE------- 124 (484)
Q Consensus 55 ~f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~------- 124 (484)
..++|+++++||+|+||+||+|+. .+|+.||||++..... ...+++.+|+.+|++++||||+++++++..
T Consensus 8 ~~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~ 87 (318)
T d3blha1 8 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNR 87 (318)
T ss_dssp BGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC-------
T ss_pred ccCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccc
Confidence 356889999999999999999994 6899999999865432 235679999999999999999999999855
Q ss_pred -CCceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCc
Q 011519 125 -GDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLM 203 (484)
Q Consensus 125 -~~~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a 203 (484)
.+..++||||+.++++..+.. ....+++..+..++.||+.||.|||+. ||+||||||+|||++.++.+||+|||++
T Consensus 88 ~~~~~~iv~e~~~~~~~~~~~~--~~~~~~~~~~~~i~~qil~~l~~lH~~-~ivHrDlKp~NILl~~~~~~kl~dfg~~ 164 (318)
T d3blha1 88 CKGSIYLVFDFCEHDLAGLLSN--VLVKFTLSEIKRVMQMLLNGLYYIHRN-KILHRDMKAANVLITRDGVLKLADFGLA 164 (318)
T ss_dssp ---CEEEEEECCCEEHHHHHTC--TTCCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCCGGGEEECTTSCEEECCCTTC
T ss_pred cCceEEEEEeccCCCccchhhh--cccccccHHHHHHHHHHHHHHHHhccC-CEEecCcCchheeecCCCcEEeeeccee
Confidence 346899999998876665543 456789999999999999999999999 9999999999999999999999999999
Q ss_pred cccCC--------CCcccCCCCCCCcccccCC-CCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcccccc---ccc
Q 011519 204 KNSRD--------GRSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTL---TDS 271 (484)
Q Consensus 204 ~~~~~--------~~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~---~~~ 271 (484)
+.... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||................ ...
T Consensus 165 ~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 244 (318)
T d3blha1 165 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 244 (318)
T ss_dssp EECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTT
T ss_pred eecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCChh
Confidence 76542 2345689999999999865 58999999999999999999999886532221111000000 000
Q ss_pred ----------------cccCCCC-------hHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 272 ----------------CLEGQFS-------SDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 272 ----------------~~~~~~~-------~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
......+ ...++.+.+|+.+||+.||++|||++|+++|-+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~Hpf 307 (318)
T d3blha1 245 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDF 307 (318)
T ss_dssp TSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGG
T ss_pred hccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcChh
Confidence 0000000 012467889999999999999999999999854
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.3e-48 Score=367.93 Aligned_cols=251 Identities=17% Similarity=0.186 Sum_probs=204.8
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCc--cHHHHHHHHHHHhcCCCCceeeeeeeeeeCCceEEEEe
Q 011519 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEGDERLLVAE 133 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 133 (484)
.+|+++++||+|+||+||+|+ ..+++.||||+++..... ...++.+|+.+|+.++||||+++++++.+....++|+|
T Consensus 2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~ 81 (292)
T d1unla_ 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEee
Confidence 478999999999999999999 467899999999654432 36789999999999999999999999999999999999
Q ss_pred cCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCCC----
Q 011519 134 YMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRDG---- 209 (484)
Q Consensus 134 y~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~---- 209 (484)
++.+++|..++. ..+.+++..+..++.|++.||+|||++ |||||||||+|||++.++.+||+|||.++.....
T Consensus 82 ~~~~~~l~~~~~--~~~~~~~~~~~~~~~q~~~aL~~lH~~-~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~~~ 158 (292)
T d1unla_ 82 FCDQDLKKYFDS--CNGDLDPEIVKSFLFQLLKGLGFCHSR-NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCY 158 (292)
T ss_dssp CCSEEHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEECTTCCEEECCCTTCEECCSCCSCC
T ss_pred eccccccccccc--cccccchhHHHHHHHHHHHHHHHhhcC-CEeeecccCcccccccCCceeeeecchhhcccCCCccc
Confidence 999999988876 556789999999999999999999998 9999999999999999999999999999876543
Q ss_pred CcccCCCCCCCcccccCCC-CCCCCceeehHHHHHHHhhCCCCCCchh-hHHhhhc-------c-------cccc-----
Q 011519 210 RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHA-LDLIRDR-------N-------IQTL----- 268 (484)
Q Consensus 210 ~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~tg~~p~~~~~-~~~~~~~-------~-------~~~~----- 268 (484)
....+++.|+|||.+.+.. ++.++|||||||++|||++|+.||.... ....... . ....
T Consensus 159 ~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (292)
T d1unla_ 159 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKP 238 (292)
T ss_dssp CSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCC
T ss_pred eeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcccccc
Confidence 2345678899999988665 6899999999999999999998864321 1100000 0 0000
Q ss_pred ----ccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHH
Q 011519 269 ----TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 269 ----~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 310 (484)
.............++.+.+|+.+||+.||.+|||++|+++|-
T Consensus 239 ~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~Hp 284 (292)
T d1unla_ 239 YPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHP 284 (292)
T ss_dssp CCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTSG
T ss_pred cccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcCh
Confidence 000011122345578899999999999999999999999883
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.2e-48 Score=379.45 Aligned_cols=252 Identities=20% Similarity=0.209 Sum_probs=195.4
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCceeeeeeeeeeC------CceEE
Q 011519 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRLANLLGCCCEG------DERLL 130 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~------~~~~l 130 (484)
+|+.++.||+|+||+||+|+. .+|+.||||++..... .+.+|+.+|++++|||||+++++|... .+++|
T Consensus 21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~----~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~l 96 (350)
T d1q5ka_ 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 96 (350)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS----SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEE
T ss_pred CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch----HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEE
Confidence 567778889999999999995 5799999999976432 234799999999999999999998643 34789
Q ss_pred EEecCCCCCHHhhhc-cCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCC-CceeeccCCccccCC
Q 011519 131 VAEYMPNDTLAKHLF-HWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV-NPRLSCFGLMKNSRD 208 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~-~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~-~~kl~DfG~a~~~~~ 208 (484)
|||||+++.+..+.. ......+++.++..|+.||+.||+|||+. ||+||||||+|||++.++ .+||+|||+++....
T Consensus 97 v~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~-~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~ 175 (350)
T d1q5ka_ 97 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF-GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 175 (350)
T ss_dssp EEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCCGGGEEECTTTCCEEECCCTTCEECCT
T ss_pred EEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhc-CCcccCCCcceEEEecCCCceeEecccchhhccC
Confidence 999998764333322 12456799999999999999999999998 999999999999999775 899999999987644
Q ss_pred C---CcccCCCCCCCcccccCC-CCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcc--------------------
Q 011519 209 G---RSYSTNLAFTPPEYLRTG-RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN-------------------- 264 (484)
Q Consensus 209 ~---~~~~~t~~y~aPE~~~~~-~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~-------------------- 264 (484)
. ....||+.|+|||.+.+. .++.++|||||||++|||++|+.||............
T Consensus 176 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~ 255 (350)
T d1q5ka_ 176 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYT 255 (350)
T ss_dssp TSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---
T ss_pred CcccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchh
Confidence 3 456789999999988754 5899999999999999999999988654221111000
Q ss_pred ---ccccccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHH--HHhhh
Q 011519 265 ---IQTLTDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTA--LVTLQ 314 (484)
Q Consensus 265 ---~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~--l~~~~ 314 (484)
.................++++.+|+.+||..||++|||+.|+++| |+.+.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~ 310 (350)
T d1q5ka_ 256 EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 310 (350)
T ss_dssp CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGG
T ss_pred hccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhcccc
Confidence 000000000111223457889999999999999999999999988 44443
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=100.00 E-value=6e-48 Score=373.49 Aligned_cols=247 Identities=18% Similarity=0.198 Sum_probs=199.3
Q ss_pred CCCcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCccHHHHHHHHHHHhcCC-CCceeeeeeeeeeC--CceEE
Q 011519 55 GFAMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCCEG--DERLL 130 (484)
Q Consensus 55 ~f~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~--~~~~l 130 (484)
+.++|++++.||+|+||+||+|+. .+|+.||||+++.. ..+++.+|+.+|+.++ ||||+++++++... ...++
T Consensus 33 ~~d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~---~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~ 109 (328)
T d3bqca1 33 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPAL 109 (328)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEE
T ss_pred CCcCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH---HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeE
Confidence 446799999999999999999994 67999999999753 3567899999999995 99999999998744 56899
Q ss_pred EEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCC-CceeeccCCccccCCC
Q 011519 131 VAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDV-NPRLSCFGLMKNSRDG 209 (484)
Q Consensus 131 v~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~-~~kl~DfG~a~~~~~~ 209 (484)
|||||++++|..+. +.+++..+..++.||+.||.|||+. |||||||||+|||++.++ .+||+|||+++.....
T Consensus 110 v~e~~~~~~L~~~~-----~~l~e~~i~~i~~qil~aL~~LH~~-gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~ 183 (328)
T d3bqca1 110 VFEHVNNTDFKQLY-----QTLTDYDIRFYMYEILKALDYCHSM-GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 183 (328)
T ss_dssp EEECCCSCBGGGTT-----TSCCHHHHHHHHHHHHHHHHHHHHT-TEECCCCSGGGEEEETTTTEEEECCGGGCEECCTT
T ss_pred EEeecCCCcHHHHh-----cCCCHHHHHHHHHHHHHHHHHHhhc-ccccccccccceEEcCCCCeeeecccccceeccCC
Confidence 99999999998764 3599999999999999999999999 999999999999998655 5999999999876543
Q ss_pred ---CcccCCCCCCCcccccCCC-CCCCCceeehHHHHHHHhhCCCCCCchhhHHh------------------hhccc--
Q 011519 210 ---RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLI------------------RDRNI-- 265 (484)
Q Consensus 210 ---~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~------------------~~~~~-- 265 (484)
....+|+.|+|||.+.+.. ++.++||||+||++++|++|+.||........ .....
T Consensus 184 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~ 263 (328)
T d3bqca1 184 QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIEL 263 (328)
T ss_dssp CCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCC
T ss_pred CcccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhccccc
Confidence 4567899999999988654 79999999999999999999998754311100 00000
Q ss_pred ----ccc--------ccccccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHH
Q 011519 266 ----QTL--------TDSCLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 266 ----~~~--------~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 310 (484)
... .............++++.+||.+||..||.+|||++|+++|-
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~Hp 320 (328)
T d3bqca1 264 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHP 320 (328)
T ss_dssp CGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred CcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcCc
Confidence 000 000011112234578899999999999999999999999873
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=5.3e-48 Score=368.94 Aligned_cols=252 Identities=15% Similarity=0.142 Sum_probs=196.5
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCc-eeeeeeeeeeCCceEEEEecC
Q 011519 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRR-LANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpn-iv~l~~~~~~~~~~~lv~Ey~ 135 (484)
+|++++.||+|+||+||+|+. .+|+.||||++..... ..++..|+++++.++|+| |+.+.+++.+.+..++||||+
T Consensus 8 rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~~ 85 (299)
T d1ckia_ 8 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL 85 (299)
T ss_dssp TEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTT--SCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred EEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhcc--CHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEEc
Confidence 588999999999999999994 6789999999876542 245789999999998766 555556667888899999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeec---CCCCceeeccCCccccCCC---
Q 011519 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFD---DDVNPRLSCFGLMKNSRDG--- 209 (484)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~---~~~~~kl~DfG~a~~~~~~--- 209 (484)
+++|.+.+.. ..+.+++..+..++.|++.||+|||++ |||||||||+|||++ .+..+||+|||+++.....
T Consensus 86 -~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~-~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~ 162 (299)
T d1ckia_ 86 -GPSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSK-NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH 162 (299)
T ss_dssp -CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHT-TEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTC
T ss_pred -CCchhhhhhh-ccCCCcHHHHHHHHHHHHHHHHHHHHC-CeeeccCCHhhccccccCCCceeeeeccCcceeccccccc
Confidence 5577776654 456799999999999999999999999 999999999999975 4567999999999875432
Q ss_pred --------CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhcc--ccccccccccCCCCh
Q 011519 210 --------RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRN--IQTLTDSCLEGQFSS 279 (484)
Q Consensus 210 --------~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 279 (484)
....||+.|+|||++.+..++.++|||||||++|||+||+.||............ ...............
T Consensus 163 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (299)
T d1ckia_ 163 QHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCK 242 (299)
T ss_dssp CBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSCHHHHTT
T ss_pred cceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCChhHhcc
Confidence 3457899999999999988999999999999999999999988653221111000 000000000001123
Q ss_pred HHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhh
Q 011519 280 DEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQ 314 (484)
Q Consensus 280 ~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~ 314 (484)
.+++++.+|+..||+.||++||++.++.+.|+.+.
T Consensus 243 ~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~ 277 (299)
T d1ckia_ 243 GYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF 277 (299)
T ss_dssp TSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHH
Confidence 45678999999999999999999999988877654
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.5e-49 Score=377.28 Aligned_cols=250 Identities=17% Similarity=0.209 Sum_probs=203.7
Q ss_pred CCcccccccCCCCCCceEEEEEe----CCCcEEEEEEecCCCC----ccHHHHHHHHHHHhcCCC-CceeeeeeeeeeCC
Q 011519 56 FAMENIVSEHGEKAPNVVYKGKL----ENQFRIAVKRFNRSAW----PDARQFLEEARAVGQLRN-RRLANLLGCCCEGD 126 (484)
Q Consensus 56 f~~~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~h-pniv~l~~~~~~~~ 126 (484)
.++|++++.||+|+||+||+|.. .+|+.||||+++.... ...+.+.+|+.+|++++| |||+++++++.+..
T Consensus 23 l~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~ 102 (322)
T d1vzoa_ 23 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 102 (322)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred hhceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCC
Confidence 46789999999999999999984 2478999999975422 224568899999999966 89999999999999
Q ss_pred ceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCcccc
Q 011519 127 ERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNS 206 (484)
Q Consensus 127 ~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~ 206 (484)
..++||||+.+|+|.+++. ..+.+++..+..++.||+.||.|||+. +||||||||+|||++.++.+||+|||+++..
T Consensus 103 ~~~~v~e~~~~~~L~~~i~--~~~~~~e~~~~~~~~Qi~~al~~lH~~-~ivHrDiKp~Nill~~~~~vkL~DFG~a~~~ 179 (322)
T d1vzoa_ 103 KLHLILDYINGGELFTHLS--QRERFTEHEVQIYVGEIVLALEHLHKL-GIIYRDIKLENILLDSNGHVVLTDFGLSKEF 179 (322)
T ss_dssp EEEEEECCCCSCBHHHHHH--HHSCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTSCEEESCSSEEEEC
T ss_pred ceeeeeecccccHHHHHHH--hcccccHHHHHHHHHHHHHHHHHhhcC-CEEeccCCccceeecCCCCEEEeeccchhhh
Confidence 9999999999999999997 445678999999999999999999999 9999999999999999999999999999765
Q ss_pred CC-----CCcccCCCCCCCcccccCC--CCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccccccccCCCCh
Q 011519 207 RD-----GRSYSTNLAFTPPEYLRTG--RVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLTDSCLEGQFSS 279 (484)
Q Consensus 207 ~~-----~~~~~~t~~y~aPE~~~~~--~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (484)
.. .....|++.|++||.+.+. .++.++|||||||+||+|+||+.||.................. ....++.
T Consensus 180 ~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~--~~~~~~~ 257 (322)
T d1vzoa_ 180 VADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILK--SEPPYPQ 257 (322)
T ss_dssp CGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHH--CCCCCCT
T ss_pred cccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhccc--CCCCCcc
Confidence 33 2346789999999999764 3688999999999999999999998654221111111111111 1123455
Q ss_pred HHHHHHHHHHHHHhccCCCCCCC-----hHHHHHHH
Q 011519 280 DEGTELVRLASRCLQYEPRERPN-----PRSLVTAL 310 (484)
Q Consensus 280 ~~~~~l~~li~~cl~~dp~~Rps-----~~~il~~l 310 (484)
..++++.+|+.+||++||++||| ++|+++|-
T Consensus 258 ~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~Hp 293 (322)
T d1vzoa_ 258 EMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 293 (322)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred cCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcCH
Confidence 67889999999999999999994 78998873
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=100.00 E-value=9.4e-48 Score=365.40 Aligned_cols=254 Identities=16% Similarity=0.145 Sum_probs=203.4
Q ss_pred cccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCC-CceeeeeeeeeeCCceEEEEecC
Q 011519 58 MENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRN-RRLANLLGCCCEGDERLLVAEYM 135 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-pniv~l~~~~~~~~~~~lv~Ey~ 135 (484)
.|++++.||+|+||+||+|+ ..+|+.||||++.... ....+.+|++.+..++| +||+.+++++......++||||+
T Consensus 6 ~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~~ 83 (293)
T d1csna_ 6 HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL 83 (293)
T ss_dssp TEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC
T ss_pred ceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEcccc--CcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEec
Confidence 57889999999999999999 4578999999986543 23457789999999965 89999999999999999999999
Q ss_pred CCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecC-----CCCceeeccCCccccCC--
Q 011519 136 PNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDD-----DVNPRLSCFGLMKNSRD-- 208 (484)
Q Consensus 136 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~-----~~~~kl~DfG~a~~~~~-- 208 (484)
+++|.+++.. .+..+++.++..++.|++.||.|||++ |||||||||+|||++. ++.+||+|||+++....
T Consensus 84 -~~~l~~~~~~-~~~~~~~~~~~~i~~q~~~~l~~lH~~-giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~ 160 (293)
T d1csna_ 84 -GPSLEDLLDL-CGRKFSVKTVAMAAKQMLARVQSIHEK-SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPV 160 (293)
T ss_dssp -CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHTT-TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTT
T ss_pred -CCCHHHHHHh-hccchhhHHHHHHHHHHHHHHHHHHHC-CceeccCCccceeecCcccccCCceEEcccceeEEcccCc
Confidence 7899999864 445799999999999999999999999 9999999999999974 57899999999986532
Q ss_pred ---------CCcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhh--hccccccccccccCCC
Q 011519 209 ---------GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIR--DRNIQTLTDSCLEGQF 277 (484)
Q Consensus 209 ---------~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~ 277 (484)
.....||+.|||||++.+..++.++|||||||++|||+||+.||......... ................
T Consensus 161 ~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l 240 (293)
T d1csna_ 161 TKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLREL 240 (293)
T ss_dssp TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHH
T ss_pred cccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCChHHh
Confidence 22457899999999999999999999999999999999999998643111000 0000000000000011
Q ss_pred ChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHHhhhcC
Q 011519 278 SSDEGTELVRLASRCLQYEPRERPNPRSLVTALVTLQKD 316 (484)
Q Consensus 278 ~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~~~~~~ 316 (484)
+..+++++.+++..|+..+|++||+++.+.+.|+.+...
T Consensus 241 ~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~~~~ 279 (293)
T d1csna_ 241 CAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLER 279 (293)
T ss_dssp TTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHHH
Confidence 233457899999999999999999999999888876543
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.2e-47 Score=371.86 Aligned_cols=248 Identities=16% Similarity=0.195 Sum_probs=190.8
Q ss_pred CcccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCc--cHHHHHHHHHHHhcCCCCceeeeeeeeeeC------Cc
Q 011519 57 AMENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEG------DE 127 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~------~~ 127 (484)
.+|++++.||+|+||+||+|+. .+|+.||||++...... ...++.+|+.+|++++|||||+++++|... ..
T Consensus 17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~ 96 (355)
T d2b1pa1 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD 96 (355)
T ss_dssp TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCce
Confidence 4689999999999999999994 57999999999765433 245689999999999999999999999643 67
Q ss_pred eEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccC
Q 011519 128 RLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSR 207 (484)
Q Consensus 128 ~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~ 207 (484)
+|+||||+.++ +.+.+. ..+++..++.++.||+.||.|||+. ||+||||||+|||++.++.+|++|||+++...
T Consensus 97 ~~iv~Ey~~~~-l~~~~~----~~~~~~~i~~~~~qil~gl~~LH~~-giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~ 170 (355)
T d2b1pa1 97 VYLVMELMDAN-LCQVIQ----MELDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 170 (355)
T ss_dssp EEEEEECCSEE-HHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHT-TCCCSCCCGGGEEECTTCCEEECCCCC-----
T ss_pred eEEEEeccchH-HHHhhh----cCCCHHHHHHHHHHHHHHHHHhhhc-ccccccCCccccccccccceeeechhhhhccc
Confidence 89999999765 555542 3589999999999999999999999 99999999999999999999999999987755
Q ss_pred CC---CcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccc-------------------
Q 011519 208 DG---RSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNI------------------- 265 (484)
Q Consensus 208 ~~---~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~------------------- 265 (484)
.. ....+|+.|+|||++.+..++.++||||+||++++|++|+.||.+...........
T Consensus 171 ~~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 250 (355)
T d2b1pa1 171 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 250 (355)
T ss_dssp ----------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHH
T ss_pred cccccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHH
Confidence 43 45678999999999999999999999999999999999999886432111100000
Q ss_pred --------------cccccccc-c--CCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHH
Q 011519 266 --------------QTLTDSCL-E--GQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 266 --------------~~~~~~~~-~--~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 310 (484)
........ . .......++++.+|+.+||..||++|||++|+++|-
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hp 312 (355)
T d2b1pa1 251 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 312 (355)
T ss_dssp HHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTST
T ss_pred HHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCc
Confidence 00000000 0 001234578899999999999999999999999984
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-47 Score=373.03 Aligned_cols=251 Identities=16% Similarity=0.202 Sum_probs=197.1
Q ss_pred CcccccccCCCCCCceEEEEE-eCCCcEEEEEEecCCCCc--cHHHHHHHHHHHhcCCCCceeeeeeeeeeC-----Cce
Q 011519 57 AMENIVSEHGEKAPNVVYKGK-LENQFRIAVKRFNRSAWP--DARQFLEEARAVGQLRNRRLANLLGCCCEG-----DER 128 (484)
Q Consensus 57 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-----~~~ 128 (484)
++|++++.||+|+||+||+|+ ..+|+.||||+++..... ..+++.+|+.+|++++|||||++++++... ...
T Consensus 18 ~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~~ 97 (348)
T d2gfsa1 18 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND 97 (348)
T ss_dssp TTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCCC
T ss_pred CCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCce
Confidence 468999999999999999999 567999999999765432 355789999999999999999999998643 334
Q ss_pred EEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccCCccccCC
Q 011519 129 LLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFGLMKNSRD 208 (484)
Q Consensus 129 ~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~ 208 (484)
++||+|+.||+|.+++. .+.+++.++..++.||+.||.|||++ ||+||||||+|||++.++.+|++|||++.....
T Consensus 98 ~~i~~~~~gg~L~~~~~---~~~l~e~~~~~i~~qil~aL~~LH~~-giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~~ 173 (348)
T d2gfsa1 98 VYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDCELKILDFGLARHTDD 173 (348)
T ss_dssp CEEEEECCSEEHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCGGGEEECTTCCEEECCC----CCTG
T ss_pred EEEEEeecCCchhhhcc---cccccHHHHHHHHHHHHHHHHHHHhC-CCcccccCCccccccccccccccccchhcccCc
Confidence 67778888999999994 35699999999999999999999999 999999999999999999999999999876544
Q ss_pred C-CcccCCCCCCCcccccCCC-CCCCCceeehHHHHHHHhhCCCCCCchhhHHhhhccccccc-----------------
Q 011519 209 G-RSYSTNLAFTPPEYLRTGR-VTPESVMYSFGTLLLDLLSGKHIPPSHALDLIRDRNIQTLT----------------- 269 (484)
Q Consensus 209 ~-~~~~~t~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~----------------- 269 (484)
. ....||+.|+|||.+.+.. ++.++|||||||++|+|++|+.||.+...............
T Consensus 174 ~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 253 (348)
T d2gfsa1 174 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN 253 (348)
T ss_dssp GGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHH
T ss_pred ccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhhhh
Confidence 3 4567889999999877654 68899999999999999999999875422111110000000
Q ss_pred --c---ccccCC---CChHHHHHHHHHHHHHhccCCCCCCChHHHHHHHH
Q 011519 270 --D---SCLEGQ---FSSDEGTELVRLASRCLQYEPRERPNPRSLVTALV 311 (484)
Q Consensus 270 --~---~~~~~~---~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l~ 311 (484)
. ...... .....++++.+||.+||..||.+|||+.|+++|-+
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~ 303 (348)
T d2gfsa1 254 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 303 (348)
T ss_dssp HHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred hhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHh
Confidence 0 000000 01234678999999999999999999999999843
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=2.3e-41 Score=331.90 Aligned_cols=252 Identities=15% Similarity=0.182 Sum_probs=192.4
Q ss_pred cccccccCCCCCCceEEEEEe-CCCcEEEEEEecCCCCccHHHHHHHHHHHhcCC-----------CCceeeeeeeeeeC
Q 011519 58 MENIVSEHGEKAPNVVYKGKL-ENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-----------NRRLANLLGCCCEG 125 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------hpniv~l~~~~~~~ 125 (484)
+|+++++||+|+||+||+|+. .+|+.||||+++... ...+.+.+|+.+++.++ |+||+++++++...
T Consensus 14 rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~-~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~ 92 (362)
T d1q8ya_ 14 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK 92 (362)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred cEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccc-cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeec
Confidence 589999999999999999994 679999999997543 22456788999888875 47899999988643
Q ss_pred --CceEEEEecCCCC-CHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCC------ce
Q 011519 126 --DERLLVAEYMPND-TLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVN------PR 196 (484)
Q Consensus 126 --~~~~lv~Ey~~~g-sL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~------~k 196 (484)
...+++|+++..+ +............+++..+..++.||+.||.|||+..||+||||||+|||++.++. ++
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~~~~~k 172 (362)
T d1q8ya_ 93 GPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIK 172 (362)
T ss_dssp ETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEE
T ss_pred cccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeeccCcccccceee
Confidence 4566677665444 33333444456678999999999999999999998439999999999999986553 99
Q ss_pred eeccCCccccCC-CCcccCCCCCCCcccccCCCCCCCCceeehHHHHHHHhhCCCCCCchhhHH-------h--------
Q 011519 197 LSCFGLMKNSRD-GRSYSTNLAFTPPEYLRTGRVTPESVMYSFGTLLLDLLSGKHIPPSHALDL-------I-------- 260 (484)
Q Consensus 197 l~DfG~a~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~-------~-------- 260 (484)
++|||.+..... .....||+.|+|||++.+..++.++||||+||++++|++|+.||....... .
T Consensus 173 l~dfg~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg 252 (362)
T d1q8ya_ 173 IADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLG 252 (362)
T ss_dssp ECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHC
T ss_pred EeecccccccccccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHHhC
Confidence 999999886544 345678999999999999999999999999999999999999875321100 0
Q ss_pred -------hhc-----------cccccccc---------cccCCCChHHHHHHHHHHHHHhccCCCCCCChHHHHHHH
Q 011519 261 -------RDR-----------NIQTLTDS---------CLEGQFSSDEGTELVRLASRCLQYEPRERPNPRSLVTAL 310 (484)
Q Consensus 261 -------~~~-----------~~~~~~~~---------~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~il~~l 310 (484)
... ....+... .....++...++++.+|+.+||..||.+|||++|+++|-
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~Hp 329 (362)
T d1q8ya_ 253 ELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHP 329 (362)
T ss_dssp SCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCG
T ss_pred CCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence 000 00000000 001234566789999999999999999999999999883
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.91 E-value=9.9e-26 Score=199.04 Aligned_cols=163 Identities=15% Similarity=0.093 Sum_probs=120.2
Q ss_pred cccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCc-------------c-----HHHHHHHHHHHhcCCCCceeeeeee
Q 011519 60 NIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWP-------------D-----ARQFLEEARAVGQLRNRRLANLLGC 121 (484)
Q Consensus 60 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-------------~-----~~~~~~E~~~l~~l~hpniv~l~~~ 121 (484)
.+-++||+|+||+||+|+..+|+.||||+++..... . .....+|...+.++.|++++..+++
T Consensus 3 ~vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~ 82 (191)
T d1zara2 3 AIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAW 82 (191)
T ss_dssp EEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEE
T ss_pred hhCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEe
Confidence 345678999999999999888999999987542110 0 1234568889999999999988766
Q ss_pred eeeCCceEEEEecCCCCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCcccccccccceeecCCCCceeeccC
Q 011519 122 CCEGDERLLVAEYMPNDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTSKERALYHDLNAYRIVFDDDVNPRLSCFG 201 (484)
Q Consensus 122 ~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~~ivH~Dlkp~Nill~~~~~~kl~DfG 201 (484)
.. .+++|||++++.+.+ ++......++.|++.+|.|||+. ||+||||||+|||++++ .++|+|||
T Consensus 83 ~~----~~lvme~~~~~~~~~---------l~~~~~~~i~~ql~~~l~~lH~~-giiHrDiKP~NILv~~~-~~~liDFG 147 (191)
T d1zara2 83 EG----NAVLMELIDAKELYR---------VRVENPDEVLDMILEEVAKFYHR-GIVHGDLSQYNVLVSEE-GIWIIDFP 147 (191)
T ss_dssp ET----TEEEEECCCCEEGGG---------CCCSCHHHHHHHHHHHHHHHHHT-TEECSCCSTTSEEEETT-EEEECCCT
T ss_pred cC----CEEEEEeeccccccc---------hhhHHHHHHHHHHHHHHHHHhhC-CEEEccCChhheeeeCC-CEEEEECC
Confidence 32 389999998865543 23344568999999999999999 99999999999999965 48999999
Q ss_pred CccccCCCCcccCCCCCCC------cccccCCCCCCCCceeehHHHH
Q 011519 202 LMKNSRDGRSYSTNLAFTP------PEYLRTGRVTPESVMYSFGTLL 242 (484)
Q Consensus 202 ~a~~~~~~~~~~~t~~y~a------PE~~~~~~~~~~~Dv~slG~~l 242 (484)
++......... .|.. .+.+ ...++.++|+||+.--+
T Consensus 148 ~a~~~~~~~~~----~~l~rd~~~~~~~f-~r~y~~~~d~~s~~~~~ 189 (191)
T d1zara2 148 QSVEVGEEGWR----EILERDVRNIITYF-SRTYRTEKDINSAIDRI 189 (191)
T ss_dssp TCEETTSTTHH----HHHHHHHHHHHHHH-HHHHCCCCCHHHHHHHH
T ss_pred CcccCCCCCcH----HHHHHHHHHHHHHH-cCCCCCcccHHHHHHHH
Confidence 98765433211 1111 0111 25678899999986544
|
| >d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.81 E-value=8.6e-20 Score=146.83 Aligned_cols=104 Identities=23% Similarity=0.332 Sum_probs=100.2
Q ss_pred HhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHH
Q 011519 377 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAA 456 (484)
Q Consensus 377 ~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 456 (484)
.+..++.+|+.+++.|+|++|+..|+++|+.+|. ++.+|+++|.+|.++|++++|+.+++++++++|+++.+|+++|.+
T Consensus 2 ~~~~l~~~g~~~~~~g~~~eAi~~~~~al~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~g~~ 80 (117)
T d1elwa_ 2 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPH-NHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAA 80 (117)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc-chhhhhcccccccccccccccchhhhhHHHhccchhhHHHHHHHH
Confidence 3566889999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHHhcccccc
Q 011519 457 LFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 457 ~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
+..+|++++|+..|++|++++|++.
T Consensus 81 ~~~~~~~~~A~~~~~~a~~~~p~~~ 105 (117)
T d1elwa_ 81 LEFLNRFEEAKRTYEEGLKHEANNP 105 (117)
T ss_dssp HHHTTCHHHHHHHHHHHHTTCTTCH
T ss_pred HHHccCHHHHHHHHHHHHHhCCCCH
Confidence 9999999999999999999998764
|
| >d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: STIP1 homology and U box-containing protein 1, STUB1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.79 E-value=4e-19 Score=157.00 Aligned_cols=104 Identities=21% Similarity=0.352 Sum_probs=100.2
Q ss_pred HhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHH
Q 011519 377 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAA 456 (484)
Q Consensus 377 ~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 456 (484)
++..+++.|+.+++.|+|++|+..|++||+++|. ++.+|+++|.||.++|+|++|+.+|++|++++|+++.+|+++|.+
T Consensus 3 ~a~~l~~~Gn~~~~~g~~~~Ai~~~~kal~~~p~-~~~~~~~lg~~y~~~~~~~~Ai~~~~~al~l~p~~~~a~~~lg~~ 81 (201)
T d2c2la1 3 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPL-VAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQC 81 (201)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHhHHHHHhhhhhhhhhhHHHHHHHHhCCCcHHHHHHHHHH
Confidence 4667899999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHHhcccccc
Q 011519 457 LFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 457 ~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
|..+|++++|+..|++|++++|+..
T Consensus 82 ~~~l~~~~~A~~~~~~al~l~p~~~ 106 (201)
T d2c2la1 82 QLEMESYDEAIANLQRAYSLAKEQR 106 (201)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHCCCHHHHHHHHHHHHHhCcccH
Confidence 9999999999999999999998643
|
| >d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Protein phosphatase 5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.78 E-value=1.2e-18 Score=148.19 Aligned_cols=107 Identities=24% Similarity=0.348 Sum_probs=103.2
Q ss_pred hHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHH
Q 011519 374 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQ 453 (484)
Q Consensus 374 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 453 (484)
....+..+..+|+.+++.|+|++|+..|++||+++|+ ++.+|+++|.+++.+|++++|+.+|++||+++|+++.+|+++
T Consensus 6 ~l~~a~~l~~~gn~~~~~~~y~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~~~~~~A~~~~~kal~~~p~~~~a~~~~ 84 (159)
T d1a17a_ 6 ALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPS-NAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRR 84 (159)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHhhhccccchh-hhhhhhhhHHHHHhccccchHHHHHHHHHHHcccchHHHHHH
Confidence 4677888999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 454 AAALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 454 g~~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
|.++..+|++++|+.+|+++++++|.+.
T Consensus 85 g~~~~~~g~~~eA~~~~~~a~~~~p~~~ 112 (159)
T d1a17a_ 85 AASNMALGKFRAALRDYETVVKVKPHDK 112 (159)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHSTTCH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHcCCCCH
Confidence 9999999999999999999999998653
|
| >d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Putative 70 kda peptidylprolyl isomerase PFL2275c species: Plasmodium falciparum [TaxId: 5833]
Probab=99.74 E-value=7.3e-18 Score=142.21 Aligned_cols=108 Identities=19% Similarity=0.202 Sum_probs=99.9
Q ss_pred hHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCC---------------HHHHHHHHHHHHhcCCHHHHHHHHHH
Q 011519 374 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVS---------------PTAFARRSLSYLMSDMPQEALNDASQ 438 (484)
Q Consensus 374 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~---------------~~~~~~~a~~~~~~~~~~~A~~~~~~ 438 (484)
....+..++..|+.+++.|+|.+|+..|++||+..+... ..+|+|+|.||+++|++++|+.+|++
T Consensus 13 ~~~~a~~~~~~G~~~f~~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~Nla~~~~~l~~~~~Al~~~~~ 92 (153)
T d2fbna1 13 KVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASK 92 (153)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcchhhhhhHHHHHhhhhHHHHHHhhHHHHHHHhcccchhhhhhhc
Confidence 567888999999999999999999999999998766411 24789999999999999999999999
Q ss_pred HHhcCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 439 AQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 439 al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
||+++|+++++||++|.+|..+|++++|+.+|++|++++|++.
T Consensus 93 al~~~p~~~ka~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~ 135 (153)
T d2fbna1 93 VLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNL 135 (153)
T ss_dssp HHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCH
T ss_pred cccccchhhhhhHHhHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 9999999999999999999999999999999999999999764
|
| >d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP52 (FKBP4), C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.72 E-value=2.9e-17 Score=141.05 Aligned_cols=108 Identities=13% Similarity=0.157 Sum_probs=100.0
Q ss_pred hHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCC--------------HHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 011519 374 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVS--------------PTAFARRSLSYLMSDMPQEALNDASQA 439 (484)
Q Consensus 374 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~--------------~~~~~~~a~~~~~~~~~~~A~~~~~~a 439 (484)
.+..+..+...|+.+++.|+|++|+..|++||+..|... ..+|.|+|.||+++|+|++|+.++++|
T Consensus 9 k~~~a~~l~~~G~~~~~~~~~~~Ai~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~y~k~~~~~~A~~~~~~a 88 (170)
T d1p5qa1 9 KLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKA 88 (170)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhccccchHHHhhhchhHHHHHHHHHHHHHhhhhcccccchhhhh
Confidence 467788999999999999999999999999999987611 247899999999999999999999999
Q ss_pred HhcCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 440 QVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 440 l~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
|+++|+++.+|+++|.+|..+|++++|+.+|++|++++|.+.
T Consensus 89 l~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~P~n~ 130 (170)
T d1p5qa1 89 LELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNK 130 (170)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCH
T ss_pred hhccccchhhhHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCH
Confidence 999999999999999999999999999999999999998653
|
| >d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP51, C-terminal domain species: Monkey (Saimiri boliviensis) [TaxId: 27679]
Probab=99.70 E-value=6.3e-17 Score=138.67 Aligned_cols=108 Identities=15% Similarity=0.204 Sum_probs=98.9
Q ss_pred hHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCC--------------CHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 011519 374 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMV--------------SPTAFARRSLSYLMSDMPQEALNDASQA 439 (484)
Q Consensus 374 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~--------------~~~~~~~~a~~~~~~~~~~~A~~~~~~a 439 (484)
.+..+..+...|+.+++.|+|.+|+..|++||...+.. ...+|.|+|.||.++|+|.+|+.+++++
T Consensus 11 ~~~~a~~~~e~G~~~~~~~~~~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~Nla~~~~~l~~~~~Ai~~~~~a 90 (168)
T d1kt1a1 11 KLEQAAIVKEKGTVYFKGGKYVQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKA 90 (168)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhccchhhhhhcchhHHHHHHhHHHHHHHhhhcccchhhhhhh
Confidence 46778899999999999999999999999999765441 1246899999999999999999999999
Q ss_pred HhcCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 440 QVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 440 l~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
++++|++.++|+++|.+|..+|+|++|+.+|++|++++|++.
T Consensus 91 l~l~p~~~~a~~~~~~~~~~l~~~~~A~~~~~~al~l~P~n~ 132 (168)
T d1kt1a1 91 LGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNK 132 (168)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCH
T ss_pred hhcccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 999999999999999999999999999999999999999764
|
| >d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.69 E-value=6.4e-17 Score=131.91 Aligned_cols=102 Identities=15% Similarity=0.166 Sum_probs=95.2
Q ss_pred HHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCCh-------H
Q 011519 376 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWH-------M 448 (484)
Q Consensus 376 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~-------~ 448 (484)
..|..+++.|+.+++.|+|++|+.+|+++|+++|+ ++.+++|+|.||..+|+|++|+.++++||+++|++. .
T Consensus 2 ~~a~~~k~~G~~~~~~~~y~~Ai~~y~~al~~~p~-~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~~~~~~~~~~~a~ 80 (128)
T d1elra_ 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELDPT-NMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAK 80 (128)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-cHHHHHhHHHHHHHcCchHHHHHHHHHHHHhCcccHHHHHHHHH
Confidence 35778899999999999999999999999999999 999999999999999999999999999999999875 4
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhccc
Q 011519 449 AAYLQAAALFALGKENEAQAALREASILEN 478 (484)
Q Consensus 449 a~~~~g~~~~~~~~~~~A~~~~~~al~l~~ 478 (484)
+|+++|.++..++++++|+..|++++.+++
T Consensus 81 ~~~~lg~~~~~~~~~~~A~~~~~kal~~~~ 110 (128)
T d1elra_ 81 AYARIGNSYFKEEKYKDAIHFYNKSLAEHR 110 (128)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhcCC
Confidence 777788899999999999999999998865
|
| >d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Cyclophilin 40 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.69 E-value=6.6e-17 Score=138.75 Aligned_cols=106 Identities=19% Similarity=0.221 Sum_probs=97.1
Q ss_pred HHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhc----------------CCCCCHHHHHHHHHHHHhcCCHHHHHHHHHH
Q 011519 375 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDV----------------GTMVSPTAFARRSLSYLMSDMPQEALNDASQ 438 (484)
Q Consensus 375 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~----------------~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~ 438 (484)
...+..+...|+.++..|+|.+|+..|++||++ +|. ...+|.|+|.|+.++|+|++|+.+|++
T Consensus 24 ~~~a~~~~~~~~~~~~~~~y~~Ai~~y~~al~~~~~~~~~~~~~~~~~~~~~-~~~~~~nla~~~~~~~~~~~Ai~~~~~ 102 (169)
T d1ihga1 24 LLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPV-ALSCVLNIGACKLKMSDWQGAVDSCLE 102 (169)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHH-HHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhhhhhhhhhHHHHHhChh-hHHHHHHHHHHHHhhcccchhhhhhhh
Confidence 445667788999999999999999999999864 445 566899999999999999999999999
Q ss_pred HHhcCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 439 AQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 439 al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
||+++|+++.+|+++|.+|..+|++++|+.+|++|++++|++.
T Consensus 103 al~~~p~~~~a~~~~g~~~~~l~~~~~A~~~~~~al~l~p~n~ 145 (169)
T d1ihga1 103 ALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDK 145 (169)
T ss_dssp HHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred hhhhhhhhhhHHHhHHHHHHHccCHHHHHHHHHHHHHhCCCCH
Confidence 9999999999999999999999999999999999999998764
|
| >d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.66 E-value=2.6e-16 Score=124.99 Aligned_cols=98 Identities=13% Similarity=0.054 Sum_probs=93.6
Q ss_pred HHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHH
Q 011519 376 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAA 455 (484)
Q Consensus 376 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 455 (484)
.........|..++++|++++|+..|+++|+.+|+ ++.+|.++|.++.++|++++|+.++++|++++|+++.+|+.+|.
T Consensus 14 ~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~la~ 92 (112)
T d1hxia_ 14 MYHENPMEEGLSMLKLANLAEAALAFEAVCQKEPE-REEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAV 92 (112)
T ss_dssp GGCSCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHhhhHHHHHHHhhhcccccc-cchhhhhhhhhhhhhhhHHHhhcccccccccccccccchHHHHH
Confidence 34455678899999999999999999999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHH
Q 011519 456 ALFALGKENEAQAALREAS 474 (484)
Q Consensus 456 ~~~~~~~~~~A~~~~~~al 474 (484)
+|..+|++++|++.|+++|
T Consensus 93 ~y~~~g~~~~A~~~l~~~l 111 (112)
T d1hxia_ 93 SHTNEHNANAALASLRAWL 111 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHHHHh
Confidence 9999999999999999986
|
| >d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Lipoprotein NlpI species: Escherichia coli [TaxId: 562]
Probab=99.63 E-value=1.1e-15 Score=139.88 Aligned_cols=107 Identities=12% Similarity=0.064 Sum_probs=102.4
Q ss_pred hHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHH
Q 011519 374 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQ 453 (484)
Q Consensus 374 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 453 (484)
+...+..++.+|..+++.|+|++|+..|++||+++|+ ++.+|+++|.+|..+|++++|+..|+++++++|+++.+|+++
T Consensus 33 ~~~~a~~~~~~G~~y~~~g~~~~A~~~~~~al~l~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~l 111 (259)
T d1xnfa_ 33 DDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPD-MPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNR 111 (259)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHhhccCCC-CHHHHhhhchHHHHHHHHHHhhhhhhHHHHHHhhhhhhHHHH
Confidence 3467888999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 454 AAALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 454 g~~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
|.+|..+|++++|+..|+++++++|.+.
T Consensus 112 g~~~~~~g~~~~A~~~~~~al~~~p~~~ 139 (259)
T d1xnfa_ 112 GIALYYGGRDKLAQDDLLAFYQDDPNDP 139 (259)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHhhHHHHHHHHHHHHhhccccH
Confidence 9999999999999999999999998653
|
| >d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Neutrophil cytosolic factor 2 (NCF-2, p67-phox) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.61 E-value=2.9e-15 Score=131.04 Aligned_cols=100 Identities=15% Similarity=0.137 Sum_probs=92.3
Q ss_pred HHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHH
Q 011519 376 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAA 455 (484)
Q Consensus 376 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 455 (484)
.++..+.++|..++.+|+|++|++.|+++ .|. ++.+|+|+|.+|..+|++++|+.+|++||++||+++.+|+++|.
T Consensus 3 ~~~~~l~~~g~~~~~~~d~~~Al~~~~~i---~~~-~~~~~~nlG~~~~~~g~~~~A~~~~~kAl~ldp~~~~a~~~~g~ 78 (192)
T d1hh8a_ 3 VEAISLWNEGVLAADKKDWKGALDAFSAV---QDP-HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGM 78 (192)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHTS---SSC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHhc---CCC-CHHHHHHHHHHHHHcCCchhHHHHHHHHHHHhhhhhhhHHHHHH
Confidence 45667888999999999999999999863 556 78899999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHhcccc
Q 011519 456 ALFALGKENEAQAALREASILENK 479 (484)
Q Consensus 456 ~~~~~~~~~~A~~~~~~al~l~~~ 479 (484)
+|..+|++++|+++|++|++..+.
T Consensus 79 ~~~~~g~~~~A~~~~~kAl~~~~~ 102 (192)
T d1hh8a_ 79 LYYQTEKYDLAIKDLKEALIQLRG 102 (192)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTTTT
T ss_pred HHHhhccHHHHHHHHHHHHHhCcc
Confidence 999999999999999999987543
|
| >d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondria fission protein Fis1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.56 E-value=3.3e-15 Score=119.98 Aligned_cols=98 Identities=8% Similarity=-0.031 Sum_probs=89.7
Q ss_pred HhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcC---CHHHHHHHHHHHHhcCCCC--hHHHHHHHHHH
Q 011519 383 KKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSD---MPQEALNDASQAQVISPVW--HMAAYLQAAAL 457 (484)
Q Consensus 383 ~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~---~~~~A~~~~~~al~~~p~~--~~a~~~~g~~~ 457 (484)
..++.+...+++++|.+.|+++|+++|. ++.+++|+|.++++.+ ++++|+..++++++.+|.+ +.+||++|.+|
T Consensus 4 ~l~n~~~~~~~l~~Ae~~Y~~aL~~~p~-~~~~~~n~a~~L~~s~~~~d~~~Ai~~l~~~l~~~~~~~~~~~~~~Lg~~y 82 (122)
T d1nzna_ 4 AVLNELVSVEDLLKFEKKFQSEKAAGSV-SKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGN 82 (122)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCC-CHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHhhCCC-CHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHH
Confidence 4677888999999999999999999999 9999999999998754 5567999999999999866 56999999999
Q ss_pred HHcCCHHHHHHHHHHHHhcccccc
Q 011519 458 FALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 458 ~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
..+|++++|++.|++|++++|++.
T Consensus 83 ~~~g~~~~A~~~~~~aL~~~P~~~ 106 (122)
T d1nzna_ 83 YRLKEYEKALKYVRGLLQTEPQNN 106 (122)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHhhhHHHHHHHHHHHHhCcCCH
Confidence 999999999999999999999764
|
| >d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Neutrophil cytosolic factor 2 (NCF-2, p67-phox) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.56 E-value=1.8e-14 Score=125.85 Aligned_cols=103 Identities=15% Similarity=0.090 Sum_probs=95.4
Q ss_pred HhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCC----------
Q 011519 377 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVW---------- 446 (484)
Q Consensus 377 ~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~---------- 446 (484)
.+..+++.|.+++..|+|++|++.|++||+++|+ ++.+|+++|.++.++|+|++|+.+|++|++..|.+
T Consensus 35 ~~~~~~nlG~~~~~~g~~~~A~~~~~kAl~ldp~-~~~a~~~~g~~~~~~g~~~~A~~~~~kAl~~~~~n~~~~~~~~~~ 113 (192)
T d1hh8a_ 35 HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKH-LAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGL 113 (192)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTB
T ss_pred CHHHHHHHHHHHHHcCCchhHHHHHHHHHHHhhh-hhhhHHHHHHHHHhhccHHHHHHHHHHHHHhCccCchHHHHHhhh
Confidence 3456889999999999999999999999999999 99999999999999999999999999999876643
Q ss_pred ------hHHHHHHHHHHHHcCCHHHHHHHHHHHHhccccc
Q 011519 447 ------HMAAYLQAAALFALGKENEAQAALREASILENKK 480 (484)
Q Consensus 447 ------~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 480 (484)
.++++++|.++..+|++++|++.|++|+++.|+.
T Consensus 114 ~~~~~~~e~~~n~a~~~~~~~~~~~A~~~l~~A~~~~~~~ 153 (192)
T d1hh8a_ 114 QFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEP 153 (192)
T ss_dssp CCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSG
T ss_pred hcccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCc
Confidence 4789999999999999999999999999987653
|
| >d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: CT2138-like domain: Hypothetical protein CT2138 species: Chlorobium tepidum [TaxId: 1097]
Probab=99.55 E-value=7.6e-15 Score=123.83 Aligned_cols=107 Identities=15% Similarity=0.161 Sum_probs=93.2
Q ss_pred HHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCC-----------HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcC
Q 011519 375 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVS-----------PTAFARRSLSYLMSDMPQEALNDASQAQVIS 443 (484)
Q Consensus 375 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~-----------~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~ 443 (484)
...+..+...|+.++..|+|++|+..|++||++.|... ..+|+|+|.+|..+|+|++|+.++++++++.
T Consensus 6 ~a~a~~~l~~g~~~~~~g~y~~Ai~~y~~Al~i~~~~~~~~~~~~~~~~a~~~~nlg~~~~~lg~~~~A~~~~~~al~~~ 85 (156)
T d2hr2a1 6 VVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYF 85 (156)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhChhhhhhhhcccchhHHHHHHHHHHHHHHcCccchhhHhhhhhhhcc
Confidence 34556666779999999999999999999999988621 3589999999999999999999999999876
Q ss_pred CC-----------ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 444 PV-----------WHMAAYLQAAALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 444 p~-----------~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
|. ...+|+++|.+|..+|++++|+.+|++|+++.|+..
T Consensus 86 ~~~~~~~~~~~~~~~~a~~~~g~~~~~lg~~eeA~~~~~~Al~l~~~~~ 134 (156)
T d2hr2a1 86 NRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERK 134 (156)
T ss_dssp HHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred cccccccccccchhHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhhHHhh
Confidence 52 456899999999999999999999999999987543
|
| >d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondrial import receptor subunit tom20-3 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.50 E-value=1e-14 Score=121.26 Aligned_cols=95 Identities=16% Similarity=0.052 Sum_probs=85.7
Q ss_pred HHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhc----------CCHHHHHHHHHHHHhcCCCChHHHHHHHH
Q 011519 386 DVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMS----------DMPQEALNDASQAQVISPVWHMAAYLQAA 455 (484)
Q Consensus 386 ~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~----------~~~~~A~~~~~~al~~~p~~~~a~~~~g~ 455 (484)
..+-+.+.|++|+..|++|++++|+ ++.+++++|.++..+ +.+++|+..+++|++++|+++.+|+++|.
T Consensus 5 ~~~~r~~~fe~A~~~~e~al~~~P~-~~~~~~~~g~~l~~~~~~~~~~e~~~~~~~Ai~~~~kAl~l~P~~~~a~~~lG~ 83 (145)
T d1zu2a1 5 TEFDRILLFEQIRQDAENTYKSNPL-DADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGN 83 (145)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHHccHHHHHHHHHHHHhhCCc-chHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHhcchhhHHHhhHHH
Confidence 3456778899999999999999999 999999999999865 45588999999999999999999999999
Q ss_pred HHHHcCC-----------HHHHHHHHHHHHhcccccc
Q 011519 456 ALFALGK-----------ENEAQAALREASILENKKS 481 (484)
Q Consensus 456 ~~~~~~~-----------~~~A~~~~~~al~l~~~~~ 481 (484)
+|..+|+ |++|++.|++|++++|.+.
T Consensus 84 ~y~~~g~~~~~~~~~~~~~~~A~~~~~kal~l~P~~~ 120 (145)
T d1zu2a1 84 AYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNT 120 (145)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHcccchhhHHHHHHhHHHhhhhhhcccccCCCHH
Confidence 9988764 7999999999999999653
|
| >d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase alpha-subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Protein prenylyltransferase family: Protein prenylyltransferase domain: Protein farnesyltransferase alpha-subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.50 E-value=7.6e-14 Score=131.86 Aligned_cols=127 Identities=6% Similarity=-0.050 Sum_probs=110.5
Q ss_pred HHHHhCCcCch-hhHhhhhhhhHHHhhhhhHhHHHHHhcc-CHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHH
Q 011519 354 ILEKLGYKDDE-GAATEMWTGQMQETLNSKKKGDVAFRHK-DFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQE 431 (484)
Q Consensus 354 ~l~~~~y~~~~-~~a~e~~~~~~~~a~~~~~~g~~~~~~~-~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~ 431 (484)
.+...+..++. ........-++.....|..+|..+...+ ++++|+..|+++|+++|+ +..+|++||.++..+|++++
T Consensus 52 ~~~~~e~~~~Al~~~~~ai~lnP~~~~a~~~r~~~l~~l~~~~~eal~~~~~al~~~p~-~~~a~~~~~~~~~~l~~~~e 130 (315)
T d2h6fa1 52 VLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPK-NYQVWHHRRVLVEWLRDPSQ 130 (315)
T ss_dssp HHHHTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCCTT
T ss_pred HHHhCCchHHHHHHHHHHHHHCCCChHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHh-hhhHHHHHhHHHHhhccHHH
Confidence 44444443333 2233344557888999999999998876 599999999999999999 99999999999999999999
Q ss_pred HHHHHHHHHhcCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 432 ALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 432 A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
|+.+++++++++|++..+|+++|.++..+|++++|+..|++|++++|.+.
T Consensus 131 Al~~~~kal~~dp~n~~a~~~~~~~~~~~~~~~~Al~~~~~al~~~p~n~ 180 (315)
T d2h6fa1 131 ELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNN 180 (315)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCH
T ss_pred HHHHHhhhhhhhhcchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHCCccH
Confidence 99999999999999999999999999999999999999999999998753
|
| >d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.48 E-value=1.1e-13 Score=130.72 Aligned_cols=104 Identities=15% Similarity=0.198 Sum_probs=98.8
Q ss_pred HhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHH
Q 011519 377 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAA 456 (484)
Q Consensus 377 ~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 456 (484)
.+..+...|..+...|++++|+..|++++..+|+ ++.+|+++|.+|..+|++++|+..++++++++|+++.+|+.+|.+
T Consensus 171 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~ 249 (323)
T d1fcha_ 171 DPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPN-DYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGIS 249 (323)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred ccccchhhHHHHHHHHHHhhhhcccccccccccc-cccchhhhhhcccccccchhHHHHHHHHHHHhhccHHHHHHHHHH
Confidence 3456778899999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHHhcccccc
Q 011519 457 LFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 457 ~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
|..+|++++|+..|++|++++|++.
T Consensus 250 ~~~~g~~~~A~~~~~~al~l~p~~~ 274 (323)
T d1fcha_ 250 CINLGAHREAVEHFLEALNMQRKSR 274 (323)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHHTC-
T ss_pred HHHCCCHHHHHHHHHHHHHhCCcCh
Confidence 9999999999999999999998764
|
| >d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase alpha-subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Protein prenylyltransferase family: Protein prenylyltransferase domain: Protein farnesyltransferase alpha-subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.46 E-value=1.1e-13 Score=130.66 Aligned_cols=106 Identities=9% Similarity=-0.070 Sum_probs=99.2
Q ss_pred HHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCC-HHHHHHHHHHHHhcCCCChHHHHHH
Q 011519 375 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDM-PQEALNDASQAQVISPVWHMAAYLQ 453 (484)
Q Consensus 375 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~-~~~A~~~~~~al~~~p~~~~a~~~~ 453 (484)
+.-+..+...|..+.+++.+++|+..|++||+++|. +..+|++||.++..+|+ +++|+.+++++++++|++..+|+++
T Consensus 40 p~~~~a~~~~~~~~~~~e~~~~Al~~~~~ai~lnP~-~~~a~~~r~~~l~~l~~~~~eal~~~~~al~~~p~~~~a~~~~ 118 (315)
T d2h6fa1 40 DKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAA-NYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHR 118 (315)
T ss_dssp HHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHCCC-ChHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhhhhHHHHH
Confidence 345566677799999999999999999999999999 99999999999999885 9999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 454 AAALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 454 g~~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
|.++..+|++++|+..|++|++++|++.
T Consensus 119 ~~~~~~l~~~~eAl~~~~kal~~dp~n~ 146 (315)
T d2h6fa1 119 RVLVEWLRDPSQELEFIADILNQDAKNY 146 (315)
T ss_dssp HHHHHHHTCCTTHHHHHHHHHHHCTTCH
T ss_pred hHHHHhhccHHHHHHHHhhhhhhhhcch
Confidence 9999999999999999999999999864
|
| >d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.39 E-value=9e-13 Score=124.31 Aligned_cols=103 Identities=10% Similarity=0.041 Sum_probs=98.0
Q ss_pred HhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHH
Q 011519 377 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAA 456 (484)
Q Consensus 377 ~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 456 (484)
+.....++|..+++.|+|++|+..|+++|+.+|+ ++.+|.++|.++..+|++++|+..+++|++++|++..+|+.+|.+
T Consensus 18 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~-~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~ 96 (323)
T d1fcha_ 18 DHPQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPK-HMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVS 96 (323)
T ss_dssp TCSSHHHHHHHHHHTTCHHHHHHHHHHHHHSCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCChHHHHHHHHhhhcccccccccccccccc
Confidence 4444578999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHHHHhccccc
Q 011519 457 LFALGKENEAQAALREASILENKK 480 (484)
Q Consensus 457 ~~~~~~~~~A~~~~~~al~l~~~~ 480 (484)
|..+|++++|++.|++++.++|+.
T Consensus 97 ~~~~~~~~~A~~~~~~~~~~~~~~ 120 (323)
T d1fcha_ 97 FTNESLQRQACEILRDWLRYTPAY 120 (323)
T ss_dssp HHHTTCHHHHHHHHHHHHHTSTTT
T ss_pred ccccccccccccchhhHHHhccch
Confidence 999999999999999999998764
|
| >d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.36 E-value=1.2e-12 Score=99.91 Aligned_cols=85 Identities=13% Similarity=0.015 Sum_probs=75.9
Q ss_pred HhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCC------CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHH
Q 011519 377 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMV------SPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAA 450 (484)
Q Consensus 377 ~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~------~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~ 450 (484)
++...++.|..++++|+|.+|+..|++|+++.|.. ...++.++|.++.++|++++|+..+++||+++|+++.++
T Consensus 4 saddc~~lG~~~~~~g~y~~A~~~~~~Al~~~~~~~~~~~~~~~~l~~Lg~~~~~~g~~~~A~~~y~~aL~l~P~~~~a~ 83 (95)
T d1tjca_ 4 TAEDSFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRAN 83 (95)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhhhhccCccHHHHHHHHhhHHHhcCChHHHHHHHHHHHHhCcCCHHHH
Confidence 35677899999999999999999999999886541 257899999999999999999999999999999999999
Q ss_pred HHHHHHHHHcC
Q 011519 451 YLQAAALFALG 461 (484)
Q Consensus 451 ~~~g~~~~~~~ 461 (484)
++++.+...++
T Consensus 84 ~Nl~~~~~~l~ 94 (95)
T d1tjca_ 84 GNLKYFEYIMA 94 (95)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhC
Confidence 99988776654
|
| >d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: O-GlcNAc transferase p110 subunit, OGT species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.34 E-value=2e-12 Score=123.91 Aligned_cols=107 Identities=15% Similarity=0.058 Sum_probs=101.2
Q ss_pred hHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHH
Q 011519 374 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQ 453 (484)
Q Consensus 374 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 453 (484)
.+..+..+...|..+...|++.+|+..|++++...|. +...+..++.++..+|++++|+..++++++++|+++.+|+++
T Consensus 267 ~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l 345 (388)
T d1w3ba_ 267 QPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPT-HADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNL 345 (388)
T ss_dssp CSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSCTTCHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHhhhccCCc-cchhhhHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 4456778889999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 454 AAALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 454 g~~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
|.+|..+|++++|+..|++|++++|+..
T Consensus 346 a~~~~~~g~~~~A~~~~~~al~l~P~~~ 373 (388)
T d1w3ba_ 346 ASVLQQQGKLQEALMHYKEAIRISPTFA 373 (388)
T ss_dssp HHHHHTTTCCHHHHHHHHHHHTTCTTCH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 9999999999999999999999999754
|
| >d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: O-GlcNAc transferase p110 subunit, OGT species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.33 E-value=3.2e-12 Score=122.37 Aligned_cols=99 Identities=14% Similarity=0.017 Sum_probs=94.7
Q ss_pred hhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHc
Q 011519 381 SKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFAL 460 (484)
Q Consensus 381 ~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~ 460 (484)
+.+.|+.+++.|+|++|+..|+++++.+|+ ++.++.++|.+|..+|++++|+..++++++++|+++.+|+.+|.+|..+
T Consensus 2 ll~la~~~~~~G~~~~A~~~~~~~l~~~p~-~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~l~~~~~~~ 80 (388)
T d1w3ba_ 2 PMELAHREYQAGDFEAAERHCMQLWRQEPD-NTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKER 80 (388)
T ss_dssp CCTHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHhhhh
Confidence 356799999999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhccccc
Q 011519 461 GKENEAQAALREASILENKK 480 (484)
Q Consensus 461 ~~~~~A~~~~~~al~l~~~~ 480 (484)
|++++|+..|.++++.++..
T Consensus 81 g~~~~A~~~~~~~~~~~~~~ 100 (388)
T d1w3ba_ 81 GQLQEAIEHYRHALRLKPDF 100 (388)
T ss_dssp TCHHHHHHHHHHHHHHCTTC
T ss_pred cccccccccccccccccccc
Confidence 99999999999999987643
|
| >d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.33 E-value=3.4e-12 Score=101.52 Aligned_cols=98 Identities=8% Similarity=-0.038 Sum_probs=86.1
Q ss_pred CcCchhhHhhhhhhhHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHH
Q 011519 360 YKDDEGAATEMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQA 439 (484)
Q Consensus 360 y~~~~~~a~e~~~~~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a 439 (484)
|++......+.....+..+..+...|.++.+.|++++|+..|+++|+++|. ++.+|+++|.++..+|++++|+..++++
T Consensus 19 ~~eAi~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~~g~~~~~~~~~~~A~~~~~~a 97 (117)
T d1elwa_ 19 IDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPD-WGKGYSRKAAALEFLNRFEEAKRTYEEG 97 (117)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCcchhhhhcccccccccccccccchhhhhHHHhccc-hhhHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 433333333444456778889999999999999999999999999999999 9999999999999999999999999999
Q ss_pred HhcCCCChHHHHHHHHHHH
Q 011519 440 QVISPVWHMAAYLQAAALF 458 (484)
Q Consensus 440 l~~~p~~~~a~~~~g~~~~ 458 (484)
++++|+++.++..++.+..
T Consensus 98 ~~~~p~~~~~~~~l~~l~~ 116 (117)
T d1elwa_ 98 LKHEANNPQLKEGLQNMEA 116 (117)
T ss_dssp HTTCTTCHHHHHHHHHHHH
T ss_pred HHhCCCCHHHHHHHHHHhC
Confidence 9999999999999988754
|
| >d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Cyclophilin 40 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.26 E-value=1.9e-11 Score=103.97 Aligned_cols=94 Identities=14% Similarity=0.149 Sum_probs=86.9
Q ss_pred hHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHH
Q 011519 374 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQ 453 (484)
Q Consensus 374 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 453 (484)
.+..+..+.++|..+++.|+|++|+..|++||+++|. ++.+|+++|.+|..+|++++|+.++.+|++++|++..++..+
T Consensus 73 ~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~-~~~a~~~~g~~~~~l~~~~~A~~~~~~al~l~p~n~~~~~~l 151 (169)
T d1ihga1 73 QPVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPS-NTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAEL 151 (169)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred ChhhHHHHHHHHHHHHhhcccchhhhhhhhhhhhhhh-hhhHHHhHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHH
Confidence 4566778889999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHH
Q 011519 454 AAALFALGKENEAQA 468 (484)
Q Consensus 454 g~~~~~~~~~~~A~~ 468 (484)
+.++..+..+.++.+
T Consensus 152 ~~~~~~l~~~~~~~k 166 (169)
T d1ihga1 152 LKVKQKIKAQKDKEK 166 (169)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999988877776643
|
| >d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Lipoprotein NlpI species: Escherichia coli [TaxId: 562]
Probab=99.26 E-value=7.1e-12 Score=114.00 Aligned_cols=109 Identities=13% Similarity=0.080 Sum_probs=97.0
Q ss_pred hhhHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCC-------
Q 011519 372 TGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISP------- 444 (484)
Q Consensus 372 ~~~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p------- 444 (484)
.-.++.+..+...|..+.+.|++++|+..|+++++++|+ ++.+|.++|.+|..+|++++|+..++++++++|
T Consensus 65 ~l~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~ 143 (259)
T d1xnfa_ 65 AIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPT-YNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSL 143 (259)
T ss_dssp HHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred ccCCCCHHHHhhhchHHHHHHHHHHhhhhhhHHHHHHhh-hhhhHHHHHHHHHHHhhHHHHHHHHHHHHhhccccHHHHH
Confidence 335667888999999999999999999999999999999 999999999999999999999999999986665
Q ss_pred ---------------------------------------------------------------CChHHHHHHHHHHHHcC
Q 011519 445 ---------------------------------------------------------------VWHMAAYLQAAALFALG 461 (484)
Q Consensus 445 ---------------------------------------------------------------~~~~a~~~~g~~~~~~~ 461 (484)
+...+|+++|.+|..+|
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g 223 (259)
T d1xnfa_ 144 WLYLAEQKLDEKQAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQTLMERLKADATDNTSLAEHLSETNFYLGKYYLSLG 223 (259)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHSCCCSTHHHHHHHHTTSSCHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhhhHHHHHHHHHHhhccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHCC
Confidence 23456778899999999
Q ss_pred CHHHHHHHHHHHHhcccccc
Q 011519 462 KENEAQAALREASILENKKS 481 (484)
Q Consensus 462 ~~~~A~~~~~~al~l~~~~~ 481 (484)
++++|+..|++|++++|++.
T Consensus 224 ~~~~A~~~~~~al~~~p~~~ 243 (259)
T d1xnfa_ 224 DLDSATALFKLAVANNVHNF 243 (259)
T ss_dssp CHHHHHHHHHHHHTTCCTTC
T ss_pred CHHHHHHHHHHHHHcCCCCH
Confidence 99999999999999988753
|
| >d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Protein phosphatase 5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.25 E-value=1.8e-11 Score=102.91 Aligned_cols=113 Identities=12% Similarity=0.034 Sum_probs=94.8
Q ss_pred CCcCchhhHhhhhhhhHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHH
Q 011519 359 GYKDDEGAATEMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQ 438 (484)
Q Consensus 359 ~y~~~~~~a~e~~~~~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~ 438 (484)
.|........+.....+..+..+...|..++..|++++|+..|++||+++|. +..+|.++|.++..+|++++|+.++++
T Consensus 25 ~y~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~kal~~~p~-~~~a~~~~g~~~~~~g~~~eA~~~~~~ 103 (159)
T d1a17a_ 25 DYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKK-YIKGYYRRAASNMALGKFRAALRDYET 103 (159)
T ss_dssp CHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CHHHHHHHhhhccccchhhhhhhhhhHHHHHhccccchHHHHHHHHHHHccc-chHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 3444333334444446778899999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHhcCCCChHHHHHHHHHH--HHcCCHHHHHHHHHH
Q 011519 439 AQVISPVWHMAAYLQAAAL--FALGKENEAQAALRE 472 (484)
Q Consensus 439 al~~~p~~~~a~~~~g~~~--~~~~~~~~A~~~~~~ 472 (484)
+++++|+++.++..++.+. ...+.+++|+.....
T Consensus 104 a~~~~p~~~~~~~~l~~~~~~~~~~~~~~a~~~~~~ 139 (159)
T d1a17a_ 104 VVKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDEH 139 (159)
T ss_dssp HHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHhCcHH
Confidence 9999999999999988775 445567777765443
|
| >d2ff4a2 a.118.8.3 (A:105-283) Probable regulatory protein EmbR, middle domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: BTAD-like domain: Probable regulatory protein EmbR, middle domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.22 E-value=6.8e-11 Score=101.13 Aligned_cols=101 Identities=10% Similarity=0.054 Sum_probs=92.7
Q ss_pred hHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCH----------------------HHHHHHHHHHHhcCCHHH
Q 011519 374 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSP----------------------TAFARRSLSYLMSDMPQE 431 (484)
Q Consensus 374 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~----------------------~~~~~~a~~~~~~~~~~~ 431 (484)
+......+...|..+...|++++|+..|++|+++.+. +. .++.+++.++..+|++++
T Consensus 7 D~~~f~~~~~~g~~~~~~g~~e~A~~~~~~AL~l~rG-~~l~~~~~~~w~~~~r~~l~~~~~~a~~~la~~~~~~g~~~~ 85 (179)
T d2ff4a2 7 DLGRFVAEKTAGVHAAAAGRFEQASRHLSAALREWRG-PVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASA 85 (179)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCS-STTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred cHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcc-cccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchH
Confidence 3566778889999999999999999999999999775 21 468899999999999999
Q ss_pred HHHHHHHHHhcCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 011519 432 ALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASI 475 (484)
Q Consensus 432 A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~ 475 (484)
|+.+++++++++|.+..+|..++.+|..+|++++|+..|+++.+
T Consensus 86 Al~~~~~al~~~P~~e~~~~~l~~al~~~Gr~~eAl~~y~~~~~ 129 (179)
T d2ff4a2 86 VIAELEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKT 129 (179)
T ss_dssp HHHHHHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999854
|
| >d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP52 (FKBP4), C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.22 E-value=3.7e-11 Score=102.16 Aligned_cols=91 Identities=13% Similarity=0.105 Sum_probs=83.9
Q ss_pred hhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 011519 378 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAAL 457 (484)
Q Consensus 378 a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 457 (484)
...+.+.|.++++.|+|++|+..+++||+++|+ ++.+|+++|.+|..+|+|++|+.+|++|++++|+++.+...++.++
T Consensus 62 ~~~~~nla~~y~k~~~~~~A~~~~~~al~~~p~-~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~P~n~~~~~~l~~~~ 140 (170)
T d1p5qa1 62 LASHLNLAMCHLKLQAFSAAIESCNKALELDSN-NEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQ 140 (170)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhcccccchhhhhhhcccc-chhhhHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 345667899999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHcCCHHHHHHH
Q 011519 458 FALGKENEAQAA 469 (484)
Q Consensus 458 ~~~~~~~~A~~~ 469 (484)
..+++..+..+.
T Consensus 141 ~~~~~~~~~e~~ 152 (170)
T d1p5qa1 141 QRIRRQLAREKK 152 (170)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 888877776543
|
| >d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: FKBP51, C-terminal domain species: Monkey (Saimiri boliviensis) [TaxId: 27679]
Probab=99.20 E-value=7.9e-11 Score=99.88 Aligned_cols=96 Identities=11% Similarity=0.128 Sum_probs=85.3
Q ss_pred HhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHH
Q 011519 377 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAA 456 (484)
Q Consensus 377 ~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 456 (484)
.+..+.+.|.++++.|+|++|+..++++|+++|+ +..+|+++|.+|..+|+|++|+.++.++++++|++..++..++.+
T Consensus 63 ~~~~~~Nla~~~~~l~~~~~Ai~~~~~al~l~p~-~~~a~~~~~~~~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~ 141 (168)
T d1kt1a1 63 LLAAFLNLAMCYLKLREYTKAVECCDKALGLDSA-NEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQIFMC 141 (168)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHH
T ss_pred HHHHHHhHHHHHHHhhhcccchhhhhhhhhcccc-hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 3455778999999999999999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHH-HHHHHHH
Q 011519 457 LFALGKENEA-QAALREA 473 (484)
Q Consensus 457 ~~~~~~~~~A-~~~~~~a 473 (484)
...++.+.+. .+.|.+.
T Consensus 142 ~~~~~~~~e~~kk~~~~~ 159 (168)
T d1kt1a1 142 QKKAKEHNERDRRTYANM 159 (168)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHHHHH
Confidence 8888777653 3334433
|
| >d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Putative 70 kda peptidylprolyl isomerase PFL2275c species: Plasmodium falciparum [TaxId: 5833]
Probab=99.16 E-value=1e-10 Score=97.45 Aligned_cols=85 Identities=12% Similarity=0.105 Sum_probs=78.7
Q ss_pred HhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHH
Q 011519 377 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAA 456 (484)
Q Consensus 377 ~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~ 456 (484)
....+.+.|..+++.|+|++|+..|++||+++|. +..+|+++|.+|..+|++++|+.++.++++++|++..+...++.+
T Consensus 66 ~~~~~~Nla~~~~~l~~~~~Al~~~~~al~~~p~-~~ka~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~~~~~~l~~~ 144 (153)
T d2fbna1 66 EISCNLNLATCYNKNKDYPKAIDHASKVLKIDKN-NVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELC 144 (153)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred HHHHHhhHHHHHHHhcccchhhhhhhccccccch-hhhhhHHhHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 3456778999999999999999999999999999 999999999999999999999999999999999999999999988
Q ss_pred HHHcCC
Q 011519 457 LFALGK 462 (484)
Q Consensus 457 ~~~~~~ 462 (484)
...+++
T Consensus 145 ~~kl~~ 150 (153)
T d2fbna1 145 VNKLKE 150 (153)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 776543
|
| >d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondrial import receptor subunit tom20-3 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.10 E-value=4.7e-11 Score=98.54 Aligned_cols=97 Identities=13% Similarity=-0.026 Sum_probs=83.7
Q ss_pred hhhhhHHHhhhhhHhHHHHHh----------ccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCC-----------
Q 011519 370 MWTGQMQETLNSKKKGDVAFR----------HKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDM----------- 428 (484)
Q Consensus 370 ~~~~~~~~a~~~~~~g~~~~~----------~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~----------- 428 (484)
....++.++..+...|.++.. .+.+++|+..|++||+++|+ ++.+|+++|.+|..+|+
T Consensus 23 al~~~P~~~~~~~~~g~~l~~~~~~~~~~e~~~~~~~Ai~~~~kAl~l~P~-~~~a~~~lG~~y~~~g~~~~~~~~~~~~ 101 (145)
T d1zu2a1 23 TYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPK-KDEAVWCIGNAYTSFAFLTPDETEAKHN 101 (145)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHCCCHHHHHHH
T ss_pred HHhhCCcchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHhcch-hhHHHhhHHHHHHHcccchhhHHHHHHh
Confidence 334567888999999999874 46678999999999999999 99999999999998764
Q ss_pred HHHHHHHHHHHHhcCCCChHHHHHHHHHHHHcCCHHHHH
Q 011519 429 PQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQ 467 (484)
Q Consensus 429 ~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~ 467 (484)
|++|+..|.+|++++|++..++..++.+....+.+.++.
T Consensus 102 ~~~A~~~~~kal~l~P~~~~~~~~L~~~~ka~~~~~e~~ 140 (145)
T d1zu2a1 102 FDLATQFFQQAVDEQPDNTHYLKSLEMTAKAPQLHAEAY 140 (145)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHTHHHHHHHHH
T ss_pred HHHhhhhhhcccccCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 799999999999999999999999999986666666653
|
| >d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: STIP1 homology and U box-containing protein 1, STUB1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.05 E-value=4.7e-11 Score=104.04 Aligned_cols=90 Identities=8% Similarity=-0.020 Sum_probs=77.0
Q ss_pred hhhhhhHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChH
Q 011519 369 EMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHM 448 (484)
Q Consensus 369 e~~~~~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~ 448 (484)
......+..+..+...|.++.+.|+|++|+..|++||+++|+ ++.+|+++|.+|..+|+|++|+..+.+|++++|++..
T Consensus 29 kal~~~p~~~~~~~~lg~~y~~~~~~~~Ai~~~~~al~l~p~-~~~a~~~lg~~~~~l~~~~~A~~~~~~al~l~p~~~~ 107 (201)
T d2c2la1 29 RAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQ-SVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRL 107 (201)
T ss_dssp HHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHhCCCCHHHHHhHHHHHhhhhhhhhhhHHHHHHHHhCCC-cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccHH
Confidence 333445678889999999999999999999999999999999 9999999999999999999999999999999987655
Q ss_pred HHHHHHHHHHH
Q 011519 449 AAYLQAAALFA 459 (484)
Q Consensus 449 a~~~~g~~~~~ 459 (484)
.+...+..+..
T Consensus 108 ~~~~~~~~~l~ 118 (201)
T d2c2la1 108 NFGDDIPSALR 118 (201)
T ss_dssp CCCSHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 44444443333
|
| >d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Hop species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.02 E-value=4.4e-10 Score=90.47 Aligned_cols=69 Identities=16% Similarity=0.061 Sum_probs=65.3
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 413 PTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 413 ~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
+..+-++|..++..|+|++|+..|+++|+++|+++.+|+++|.+|..+|+|++|+.+|++|++++|+..
T Consensus 4 a~~~k~~G~~~~~~~~y~~Ai~~y~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~~~~~ 72 (128)
T d1elra_ 4 ALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENR 72 (128)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHhHHHHHHHcCchHHHHHHHHHHHHhCcccH
Confidence 456788999999999999999999999999999999999999999999999999999999999998654
|
| >d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.02 E-value=4.1e-10 Score=88.33 Aligned_cols=68 Identities=21% Similarity=0.012 Sum_probs=64.7
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 414 TAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 414 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
..++++|.++.+.|++++|+..++++++++|+++.+|+.+|.++..+|++++|+..|++|++++|++.
T Consensus 17 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~ 84 (112)
T d1hxia_ 17 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDI 84 (112)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHhhhcccccccchhhhhhhhhhhhhhhHHHhhcccccccccccccc
Confidence 34678999999999999999999999999999999999999999999999999999999999999764
|
| >d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondria fission protein Fis1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.00 E-value=2e-10 Score=91.46 Aligned_cols=88 Identities=13% Similarity=0.009 Sum_probs=76.5
Q ss_pred hhhHHHhhhhhHhHHHHHhc---cCHHHHHHHHHHHHhcCCCCC--HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCC
Q 011519 372 TGQMQETLNSKKKGDVAFRH---KDFRASIECYTQFIDVGTMVS--PTAFARRSLSYLMSDMPQEALNDASQAQVISPVW 446 (484)
Q Consensus 372 ~~~~~~a~~~~~~g~~~~~~---~~~~~A~~~~~~ai~~~p~~~--~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~ 446 (484)
...+..+..+++.|..+++. +++.+|+..|+++++.+|. + ..+|+++|.+|.++|+|++|+..++++|+++|++
T Consensus 27 ~~~p~~~~~~~n~a~~L~~s~~~~d~~~Ai~~l~~~l~~~~~-~~~~~~~~~Lg~~y~~~g~~~~A~~~~~~aL~~~P~~ 105 (122)
T d1nzna_ 27 AAGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSK-EEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQN 105 (122)
T ss_dssp HHSCCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCH-HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred hhCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhccCC-chHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCcCC
Confidence 33456778889999999864 5667899999999999987 4 3589999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHc
Q 011519 447 HMAAYLQAAALFAL 460 (484)
Q Consensus 447 ~~a~~~~g~~~~~~ 460 (484)
.+|...++.+..++
T Consensus 106 ~~A~~l~~~I~~~~ 119 (122)
T d1nzna_ 106 NQAKELERLIDKAM 119 (122)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999998887654
|
| >d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.00 E-value=5.4e-10 Score=84.73 Aligned_cols=70 Identities=9% Similarity=-0.142 Sum_probs=63.9
Q ss_pred CHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCC-------hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 412 SPTAFARRSLSYLMSDMPQEALNDASQAQVISPVW-------HMAAYLQAAALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 412 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~-------~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
+++-.+++|.++++.|+|++|+..+++|+++.|.+ +.+|+++|.++..+|++++|+..|++||+++|+..
T Consensus 4 saddc~~lG~~~~~~g~y~~A~~~~~~Al~~~~~~~~~~~~~~~~l~~Lg~~~~~~g~~~~A~~~y~~aL~l~P~~~ 80 (95)
T d1tjca_ 4 TAEDSFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQ 80 (95)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhhhhccCccHHHHHHHHhhHHHhcCChHHHHHHHHHHHHhCcCCH
Confidence 45667899999999999999999999999987654 68999999999999999999999999999999764
|
| >d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: SMG-7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.81 E-value=1.8e-09 Score=107.95 Aligned_cols=102 Identities=8% Similarity=-0.065 Sum_probs=68.7
Q ss_pred hHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHH
Q 011519 374 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQ 453 (484)
Q Consensus 374 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 453 (484)
++..+..+...|..+.+.+++++|+..|.+++..+|. .++.++|.++...|+|++|+.+|.+|++++|+++.+|+++
T Consensus 116 ~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~---~~~~~LG~l~~~~~~~~~A~~~y~~A~~l~P~~~~~~~~L 192 (497)
T d1ya0a1 116 DLPCRVKSSQLGIISNKQTHTSAIVKPQSSSCSYICQ---HCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQL 192 (497)
T ss_dssp ---------------------------CCHHHHHHHH---HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHH
T ss_pred ChhhHHHHHHhHHHHHhCCCHHHHHHHHHHHhCCCHH---HHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCchHHHHHH
Confidence 4566777888999999999999999999999988754 5788899999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHhccc
Q 011519 454 AAALFALGKENEAQAALREASILEN 478 (484)
Q Consensus 454 g~~~~~~~~~~~A~~~~~~al~l~~ 478 (484)
|.++...|++.+|+..|.+|+.++|
T Consensus 193 g~~~~~~~~~~~A~~~y~ral~~~~ 217 (497)
T d1ya0a1 193 AILASSKGDHLTTIFYYCRSIAVKF 217 (497)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHSSSB
T ss_pred HHHHHHcCCHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999875
|
| >d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Vesicular transport protein sec17 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.76 E-value=7.7e-09 Score=95.52 Aligned_cols=103 Identities=9% Similarity=-0.015 Sum_probs=88.3
Q ss_pred HhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCC-----CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCC-----
Q 011519 377 ETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTM-----VSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVW----- 446 (484)
Q Consensus 377 ~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~-----~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~----- 446 (484)
.+..|.+.|+.+...++|++|++.|.+|+++... .....|.++|.||.++|++++|+..+++++++.+..
T Consensus 36 Aa~~y~~aa~~y~~~~~~~~A~~~y~kA~~~~~~~~~~~~~a~~~~~~g~~y~~~~~~~~A~~~~~~a~~~~~~~~~~~~ 115 (290)
T d1qqea_ 36 AADLCVQAATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRR 115 (290)
T ss_dssp HHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhCCcHHHHHHHHHhhHHhhhcccchh
Confidence 3556778899999999999999999999987321 134689999999999999999999999999998766
Q ss_pred -hHHHHHHHHHHHH-cCCHHHHHHHHHHHHhcccc
Q 011519 447 -HMAAYLQAAALFA-LGKENEAQAALREASILENK 479 (484)
Q Consensus 447 -~~a~~~~g~~~~~-~~~~~~A~~~~~~al~l~~~ 479 (484)
..++.++|.+|.. +|++++|+..|++|+++.+.
T Consensus 116 ~~~~~~~l~~~~~~~~~~~~~A~~~~~~A~~l~~~ 150 (290)
T d1qqea_ 116 GANFKFELGEILENDLHDYAKAIDCYELAGEWYAQ 150 (290)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHh
Confidence 6788899998865 79999999999999998643
|
| >d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase alpha-subunit, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Protein prenylyltransferase family: Protein prenylyltransferase domain: Rab geranylgeranyltransferase alpha-subunit, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.75 E-value=1.6e-08 Score=95.22 Aligned_cols=106 Identities=11% Similarity=0.016 Sum_probs=75.8
Q ss_pred hHHHhhhhhHhHHHHHhcc--CHHHHHHHHHHHHhcCCCCCHHHH-HHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHH
Q 011519 374 QMQETLNSKKKGDVAFRHK--DFRASIECYTQFIDVGTMVSPTAF-ARRSLSYLMSDMPQEALNDASQAQVISPVWHMAA 450 (484)
Q Consensus 374 ~~~~a~~~~~~g~~~~~~~--~~~~A~~~~~~ai~~~p~~~~~~~-~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~ 450 (484)
.+.....+...|..+...+ ++++|+..++++++.+|. +..++ ..++.++...+++++|+..++++++++|.+..+|
T Consensus 103 ~pk~~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~~~-~~~~~~~~~~~~~~~~~~~~~Al~~~~~~i~~~p~~~~a~ 181 (334)
T d1dcea1 103 NPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADER-NFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSW 181 (334)
T ss_dssp CTTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHH
T ss_pred CCCcHHHHHHhhHHHHHhccccHHHHHHHHHHHHhhCch-hhhhhhhHHHHHHHhccccHHHHHHHHHHHHcCCCCHHHH
Confidence 3455556666666665544 477777777777777777 66654 4566777777777777777777777777777777
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhccccc
Q 011519 451 YLQAAALFALGKENEAQAALREASILENKK 480 (484)
Q Consensus 451 ~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 480 (484)
+++|.++..+|++++|+..+++++++.|+.
T Consensus 182 ~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~ 211 (334)
T d1dcea1 182 HYRSCLLPQLHPQPDSGPQGRLPENVLLKE 211 (334)
T ss_dssp HHHHHHHHHHSCCCCSSSCCSSCHHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHhHHhHHHH
Confidence 777777777777777777777777776654
|
| >d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio parahaemolyticus [TaxId: 670]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: ImpE-like superfamily: ImpE-like family: ImpE-like domain: Hypothetical protein VPA1032 species: Vibrio parahaemolyticus [TaxId: 670]
Probab=98.68 E-value=2e-08 Score=91.00 Aligned_cols=95 Identities=8% Similarity=-0.006 Sum_probs=75.9
Q ss_pred hHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHH------------
Q 011519 384 KGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAY------------ 451 (484)
Q Consensus 384 ~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~------------ 451 (484)
++..+++.|++++|+..|+++|+.+|+ ++.++.+++.+|...|++++|+..++++++++|++..++.
T Consensus 2 q~~~aL~~G~l~eAl~~l~~al~~~P~-d~~ar~~La~lL~~~G~~e~A~~~l~~a~~l~P~~~~~~~~l~~ll~a~~~~ 80 (264)
T d1zbpa1 2 QWKNALSEGQLQQALELLIEAIKASPK-DASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQLRHLVKAAQAR 80 (264)
T ss_dssp CHHHHTTTTCHHHHHHHHHHHHHTCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHCCCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhcccc
Confidence 356678889999999999999999999 9999999999999999999999999999988876554444
Q ss_pred -----------------------HHHHHHHHcCCHHHHHHHHHHHHhcccc
Q 011519 452 -----------------------LQAAALFALGKENEAQAALREASILENK 479 (484)
Q Consensus 452 -----------------------~~g~~~~~~~~~~~A~~~~~~al~l~~~ 479 (484)
.++.++...|++++|.+.++++.++.|.
T Consensus 81 ~~a~~~~~~~~~~~~p~~~~~~l~~a~~~~~~gd~~~A~~~~~~a~e~~p~ 131 (264)
T d1zbpa1 81 KDFAQGAATAKVLGENEELTKSLVSFNLSMVSQDYEQVSELALQIEELRQE 131 (264)
T ss_dssp HHHTTSCCCEECCCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHhhhhhcccCchHHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCC
Confidence 4555566667778888888877777654
|
| >d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase alpha-subunit, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Protein prenylyltransferase family: Protein prenylyltransferase domain: Rab geranylgeranyltransferase alpha-subunit, N-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.64 E-value=8.1e-08 Score=90.20 Aligned_cols=108 Identities=10% Similarity=-0.098 Sum_probs=93.2
Q ss_pred hhHHHhhhhhHhHHHHHhcc----------CHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCC--HHHHHHHHHHHH
Q 011519 373 GQMQETLNSKKKGDVAFRHK----------DFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDM--PQEALNDASQAQ 440 (484)
Q Consensus 373 ~~~~~a~~~~~~g~~~~~~~----------~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~--~~~A~~~~~~al 440 (484)
.++.....|..++..+...+ ++++|+..|+++++.+|+ ++.+|+++|.++..+++ +++|+..+.+++
T Consensus 58 ~~P~~~~a~~~r~~~l~~l~~~~~~~~~~~~~~~al~~~~~~l~~~pk-~~~~~~~~~~~~~~~~~~~~~~a~~~~~~al 136 (334)
T d1dcea1 58 ANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPK-SYGTWHHRCWLLSRLPEPNWARELELCARFL 136 (334)
T ss_dssp HCTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHTCSSCCHHHHHHHHHHHH
T ss_pred HCCCcHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhCCC-cHHHHHHhhHHHHHhccccHHHHHHHHHHHH
Confidence 35566777777777766544 488999999999999999 99999999999988875 899999999999
Q ss_pred hcCCCChHHH-HHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 441 VISPVWHMAA-YLQAAALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 441 ~~~p~~~~a~-~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
+++|.+..++ +.+|.++...+++++|+..++++++++|.+.
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~Al~~~~~~i~~~p~~~ 178 (334)
T d1dcea1 137 EADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNY 178 (334)
T ss_dssp HHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCH
T ss_pred hhCchhhhhhhhHHHHHHHhccccHHHHHHHHHHHHcCCCCH
Confidence 9999999986 4678999999999999999999999998764
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=98.62 E-value=4.1e-08 Score=88.96 Aligned_cols=139 Identities=13% Similarity=-0.018 Sum_probs=91.9
Q ss_pred cccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCC-CCceeeeeeeeeeCCceEEEEecCC
Q 011519 58 MENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVAEYMP 136 (484)
Q Consensus 58 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~lv~Ey~~ 136 (484)
.+++++..+-++.+.||+... +++.++||+...........+.+|...+..+. +--+.+++.+...++..++||++++
T Consensus 15 ~~~~~~~~~G~s~~~v~rv~~-~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~~~l~ 93 (263)
T d1j7la_ 15 KYRCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEAD 93 (263)
T ss_dssp TSEEEECSCCCSSSEEEEEEC-SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCS
T ss_pred ceEEEEcCCCCCCCcEEEEEe-CCCeEEEEEcCCCcccchhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEEEecc
Confidence 345555444455678999875 44467888876544333445778888887774 4446777888888889999999999
Q ss_pred CCCHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhc-------------------------------------------
Q 011519 137 NDTLAKHLFHWETQPMKWAMRLRVALHIAEALEYCTS------------------------------------------- 173 (484)
Q Consensus 137 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~lH~------------------------------------------- 173 (484)
|.++.+..... .. ...++.+++..|..||+
T Consensus 94 G~~~~~~~~~~----~~---~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (263)
T d1j7la_ 94 GVLCSEEYEDE----QS---PEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKD 166 (263)
T ss_dssp SEEHHHHTTTC----SC---HHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGGSTTCSCSS
T ss_pred ccccccccccc----cc---HHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhhcccccccchH
Confidence 98886654210 11 12233334444444432
Q ss_pred ---------------CCCcccccccccceeecCCCCceeeccCCcc
Q 011519 174 ---------------KERALYHDLNAYRIVFDDDVNPRLSCFGLMK 204 (484)
Q Consensus 174 ---------------~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~ 204 (484)
...++|+|+.|.|||+++++.+-|+||+.+.
T Consensus 167 ~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T d1j7la_ 167 PRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp HHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEeechhcc
Confidence 0137899999999999977666799998754
|
| >d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Vesicular transport protein sec17 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.62 E-value=5.4e-08 Score=89.64 Aligned_cols=105 Identities=8% Similarity=-0.197 Sum_probs=90.2
Q ss_pred HHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCC------HHHHHHHHHHHHh-cCCHHHHHHHHHHHHhcCCC--
Q 011519 375 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVS------PTAFARRSLSYLM-SDMPQEALNDASQAQVISPV-- 445 (484)
Q Consensus 375 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~------~~~~~~~a~~~~~-~~~~~~A~~~~~~al~~~p~-- 445 (484)
...+..+.+.|..+.+.|++++|+..|++++++.+. . ..++.++|.+|.. +|++++|+..+.+|+++.+.
T Consensus 74 ~~~a~~~~~~g~~y~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~A~~l~~~~~ 152 (290)
T d1qqea_ 74 DEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTH-RGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQ 152 (290)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-TTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHhCCcHHHHHHHHHhhHHhhh-cccchhHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHhcC
Confidence 445778899999999999999999999999988655 3 4578888988855 79999999999999987542
Q ss_pred ----ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhccccc
Q 011519 446 ----WHMAAYLQAAALFALGKENEAQAALREASILENKK 480 (484)
Q Consensus 446 ----~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~ 480 (484)
...++.++|.++..+|+|++|+..|++++++.+..
T Consensus 153 ~~~~~~~~~~~la~~~~~~g~y~~A~~~~~~~~~~~~~~ 191 (290)
T d1qqea_ 153 SVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGN 191 (290)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSC
T ss_pred chhhhhhHHHHHHHHHHHcChHHHHHHHHHHHHHhCccc
Confidence 35678999999999999999999999999987643
|
| >d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Transcription factor MalT domain III domain: Transcription factor MalT domain III species: Escherichia coli [TaxId: 562]
Probab=98.54 E-value=2.2e-07 Score=86.66 Aligned_cols=103 Identities=14% Similarity=-0.045 Sum_probs=89.6
Q ss_pred HHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCC----HHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCC-----
Q 011519 376 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVS----PTAFARRSLSYLMSDMPQEALNDASQAQVISPVW----- 446 (484)
Q Consensus 376 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~----~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~----- 446 (484)
..+....-+|..++..|++++|+..|+++++..|..+ ..++.++|.++..+|++++|+..+.+++++.|..
T Consensus 10 ~~ae~~~lrA~~~~~~g~~~~A~~~~~~aL~~~~~~~~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~ 89 (366)
T d1hz4a_ 10 MHAEFNALRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHY 89 (366)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred hhHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcCCCcHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhcchHH
Confidence 3455566679999999999999999999999999822 2478899999999999999999999999876543
Q ss_pred -hHHHHHHHHHHHHcCCHHHHHHHHHHHHhccc
Q 011519 447 -HMAAYLQAAALFALGKENEAQAALREASILEN 478 (484)
Q Consensus 447 -~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~ 478 (484)
..+++.+|.++...|++..|+..+.+++++.+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~~ 122 (366)
T d1hz4a_ 90 ALWSLIQQSEILFAQGFLQTAWETQEKAFQLIN 122 (366)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 57788999999999999999999999998764
|
| >d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: SMG-7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.43 E-value=3.6e-07 Score=90.77 Aligned_cols=83 Identities=8% Similarity=-0.045 Sum_probs=78.4
Q ss_pred hhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 011519 378 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAAL 457 (484)
Q Consensus 378 a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 457 (484)
...+...|..+..+++|++|+..|.+|++++|+ +..+|+++|.++...|++.+|+.+|.+|+.++|.++.|+.+++.++
T Consensus 152 ~~~~~~LG~l~~~~~~~~~A~~~y~~A~~l~P~-~~~~~~~Lg~~~~~~~~~~~A~~~y~ral~~~~~~~~a~~nL~~~~ 230 (497)
T d1ya0a1 152 QHCLVHLGDIARYRNQTSQAESYYRHAAQLVPS-NGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKAL 230 (497)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-BSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCC-chHHHHHHHHHHHHcCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHH
Confidence 456788999999999999999999999999999 9999999999999999999999999999999999999999999988
Q ss_pred HHcC
Q 011519 458 FALG 461 (484)
Q Consensus 458 ~~~~ 461 (484)
....
T Consensus 231 ~~~~ 234 (497)
T d1ya0a1 231 SKAL 234 (497)
T ss_dssp HHHT
T ss_pred HHhh
Confidence 6644
|
| >d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Transcription factor MalT domain III domain: Transcription factor MalT domain III species: Escherichia coli [TaxId: 562]
Probab=98.42 E-value=3.6e-07 Score=85.10 Aligned_cols=105 Identities=11% Similarity=-0.031 Sum_probs=91.1
Q ss_pred HHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCC---CHHHHHHHHHHHHhcCCHHHHHHHHHHHH------hcCCC
Q 011519 375 MQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMV---SPTAFARRSLSYLMSDMPQEALNDASQAQ------VISPV 445 (484)
Q Consensus 375 ~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~---~~~~~~~~a~~~~~~~~~~~A~~~~~~al------~~~p~ 445 (484)
...+..+...|..+...+++++|+..+.++++..+.. ....+.++|.++..+|++++|+..+++++ ...|.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~ 289 (366)
T d1hz4a_ 210 DWISNANKVRVIYWQMTGDKAAAANWLRHTAKPEFANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARSLRLMSD 289 (366)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHSCCCCCTTCGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred chHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhcccChH
Confidence 3445567778889999999999999999999988762 23567889999999999999999999998 45577
Q ss_pred ChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccc
Q 011519 446 WHMAAYLQAAALFALGKENEAQAALREASILENK 479 (484)
Q Consensus 446 ~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 479 (484)
.+.+++.+|.+|..+|++++|++.|++|+++.+.
T Consensus 290 ~~~~~~~la~~~~~~g~~~~A~~~l~~Al~l~~~ 323 (366)
T d1hz4a_ 290 LNRNLLLLNQLYWQAGRKSDAQRVLLDALKLANR 323 (366)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhh
Confidence 8899999999999999999999999999998643
|
| >d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: CT2138-like domain: Hypothetical protein CT2138 species: Chlorobium tepidum [TaxId: 1097]
Probab=98.39 E-value=3.5e-07 Score=75.65 Aligned_cols=67 Identities=22% Similarity=0.118 Sum_probs=58.6
Q ss_pred HHHHHH--HHHHHhcCCHHHHHHHHHHHHhcCCCC------------hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccc
Q 011519 414 TAFARR--SLSYLMSDMPQEALNDASQAQVISPVW------------HMAAYLQAAALFALGKENEAQAALREASILENK 479 (484)
Q Consensus 414 ~~~~~~--a~~~~~~~~~~~A~~~~~~al~~~p~~------------~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~ 479 (484)
.+|.++ |..++..|+|++|+..|++||+++|+. +.+|.++|.+|..+|++++|+.++++++++.++
T Consensus 8 ~a~~~l~~g~~~~~~g~y~~Ai~~y~~Al~i~~~~~~~~~~~~~~~~a~~~~nlg~~~~~lg~~~~A~~~~~~al~~~~~ 87 (156)
T d2hr2a1 8 GAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNR 87 (156)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhChhhhhhhhcccchhHHHHHHHHHHHHHHcCccchhhHhhhhhhhcccc
Confidence 345544 788889999999999999999999875 368999999999999999999999999998765
Q ss_pred c
Q 011519 480 K 480 (484)
Q Consensus 480 ~ 480 (484)
.
T Consensus 88 ~ 88 (156)
T d2hr2a1 88 R 88 (156)
T ss_dssp H
T ss_pred c
Confidence 3
|
| >d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio parahaemolyticus [TaxId: 670]} | Back information, alignment and structure |
|---|
class: Multi-domain proteins (alpha and beta) fold: ImpE-like superfamily: ImpE-like family: ImpE-like domain: Hypothetical protein VPA1032 species: Vibrio parahaemolyticus [TaxId: 670]
Probab=98.36 E-value=6.7e-08 Score=87.37 Aligned_cols=85 Identities=12% Similarity=-0.095 Sum_probs=67.7
Q ss_pred hhHhhhhhhhHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHH------------------------------
Q 011519 365 GAATEMWTGQMQETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPT------------------------------ 414 (484)
Q Consensus 365 ~~a~e~~~~~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~------------------------------ 414 (484)
....+....++.++..+...|..+...|++++|+..|+++++++|+ ...
T Consensus 17 ~~l~~al~~~P~d~~ar~~La~lL~~~G~~e~A~~~l~~a~~l~P~-~~~~~~~l~~ll~a~~~~~~a~~~~~~~~~~~~ 95 (264)
T d1zbpa1 17 ELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPE-YLPGASQLRHLVKAAQARKDFAQGAATAKVLGE 95 (264)
T ss_dssp HHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGG-GHHHHHHHHHHHHHHHHHHHHTTSCCCEECCCS
T ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHhccccHHHHHHhhhhhcccC
Confidence 3334444556788999999999999999999999999999999887 433
Q ss_pred -----HHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHH
Q 011519 415 -----AFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAA 450 (484)
Q Consensus 415 -----~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~ 450 (484)
.+..++.++...|++++|++.++++.++.|+.+..+
T Consensus 96 p~~~~~~l~~a~~~~~~gd~~~A~~~~~~a~e~~p~~~~~~ 136 (264)
T d1zbpa1 96 NEELTKSLVSFNLSMVSQDYEQVSELALQIEELRQEKGFLA 136 (264)
T ss_dssp CHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCCEEE
T ss_pred chHHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCCCCccc
Confidence 355667777778888888888888888888776544
|
| >d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondria fission protein Fis1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.26 E-value=2e-06 Score=66.49 Aligned_cols=80 Identities=6% Similarity=-0.130 Sum_probs=64.9
Q ss_pred hhhhHhHHHHHhc---cCHHHHHHHHHHHHhcCCCCCH-HHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHH
Q 011519 379 LNSKKKGDVAFRH---KDFRASIECYTQFIDVGTMVSP-TAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQA 454 (484)
Q Consensus 379 ~~~~~~g~~~~~~---~~~~~A~~~~~~ai~~~p~~~~-~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g 454 (484)
..-++-|..+.+. .+..+||..++++++.+|. .. ++++++|.+|.++|+|++|...++++|+++|++.+|...+-
T Consensus 36 qt~F~YAw~Lv~S~~~~d~~~gI~lLe~~~~~~p~-~~rd~lY~Lav~yyklgdy~~A~~~~~~~L~ieP~n~qA~~L~~ 114 (124)
T d2pqrb1 36 QSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAES-RRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKS 114 (124)
T ss_dssp HHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGG-GHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred chHHHHHHHHHcCCcHHHHHHHHHHHHHHHhcCch-hHHHHHHHHHHHHHHHhhHHHHHHHHHHHHccCCCcHHHHHHHH
Confidence 3445666666644 5667899999999999987 54 79999999999999999999999999999999999987776
Q ss_pred HHHHH
Q 011519 455 AALFA 459 (484)
Q Consensus 455 ~~~~~ 459 (484)
.+...
T Consensus 115 ~Ie~~ 119 (124)
T d2pqrb1 115 MVEDK 119 (124)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65433
|
| >d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: Tetratricopeptide repeat (TPR) domain: Mitochondria fission protein Fis1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.25 E-value=3.2e-06 Score=65.35 Aligned_cols=73 Identities=8% Similarity=-0.002 Sum_probs=64.6
Q ss_pred CCCCHHHHHHHHHHHHhcCC---HHHHHHHHHHHHhcCCCC-hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcccccc
Q 011519 409 TMVSPTAFARRSLSYLMSDM---PQEALNDASQAQVISPVW-HMAAYLQAAALFALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 409 p~~~~~~~~~~a~~~~~~~~---~~~A~~~~~~al~~~p~~-~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
|.+.....++.|.++.+..+ .++||..++.+++.+|.. .+.+|.+|.+|+.+|+|++|.+.++++|+++|.+.
T Consensus 31 ~~~s~qt~F~YAw~Lv~S~~~~d~~~gI~lLe~~~~~~p~~~rd~lY~Lav~yyklgdy~~A~~~~~~~L~ieP~n~ 107 (124)
T d2pqrb1 31 PTATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNK 107 (124)
T ss_dssp GGSCHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCH
T ss_pred CCCCcchHHHHHHHHHcCCcHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHccCCCcH
Confidence 44457899999999997644 568999999999999976 48999999999999999999999999999999875
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=98.17 E-value=8.5e-06 Score=72.74 Aligned_cols=70 Identities=19% Similarity=0.184 Sum_probs=51.8
Q ss_pred CceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCC--CCceeeeeeeeeeCCceEEEEecCCCCCHHh
Q 011519 70 PNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLR--NRRLANLLGCCCEGDERLLVAEYMPNDTLAK 142 (484)
Q Consensus 70 ~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--hpniv~l~~~~~~~~~~~lv~Ey~~~gsL~~ 142 (484)
.+.||+....++..+++|.-..... ..+..|+..|+.+. .-.+.+++.+..+++..++||++++|.++.+
T Consensus 24 ~~~v~r~~~~~~~~~vlK~~~~~~~---~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~~~ 95 (255)
T d1nd4a_ 24 DAAVFRLSAQGRPVLFVKTDLSGAL---NELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLLS 95 (255)
T ss_dssp SCEEEEEECTTSCCEEEEEECSCTT---SCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETTT
T ss_pred CCeEEEEEeCCCCEEEEEeCCccCH---hHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeecccccc
Confidence 3679999988888899998765432 23567777777663 3346778888888888999999998866543
|
| >d2onda1 a.118.8.7 (A:242-549) Cleavage stimulation factor 77 kDa subunit CSTF3 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: HAT/Suf repeat domain: Cleavage stimulation factor 77 kDa subunit CSTF3 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.09 E-value=1.1e-05 Score=74.26 Aligned_cols=98 Identities=8% Similarity=-0.056 Sum_probs=75.2
Q ss_pred hhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHh-cCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHH
Q 011519 380 NSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLM-SDMPQEALNDASQAQVISPVWHMAAYLQAAALF 458 (484)
Q Consensus 380 ~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~-~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~ 458 (484)
.+...+....+.++++.|++.|.+|++..|. +...|...|..... .|+.+.|...++++++..|+++..|...+..+.
T Consensus 136 ~w~~~~~~~~~~~~~~~ar~i~~~al~~~~~-~~~~~~~~a~~e~~~~~~~~~a~~i~e~~l~~~p~~~~~w~~y~~~~~ 214 (308)
T d2onda1 136 VYIQYMKFARRAEGIKSGRMIFKKAREDART-RHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLS 214 (308)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHTSTTC-CTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHH
Confidence 3556666667778888888888888888887 77777777765443 577888888888888888888888888888888
Q ss_pred HcCCHHHHHHHHHHHHhccc
Q 011519 459 ALGKENEAQAALREASILEN 478 (484)
Q Consensus 459 ~~~~~~~A~~~~~~al~l~~ 478 (484)
..|+++.|...|++|++..|
T Consensus 215 ~~g~~~~aR~~fe~ai~~~~ 234 (308)
T d2onda1 215 HLNEDNNTRVLFERVLTSGS 234 (308)
T ss_dssp TTCCHHHHHHHHHHHHHSSS
T ss_pred HcCChHHHHHHHHHHHHhCC
Confidence 88888888888888887654
|
| >d2onda1 a.118.8.7 (A:242-549) Cleavage stimulation factor 77 kDa subunit CSTF3 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: HAT/Suf repeat domain: Cleavage stimulation factor 77 kDa subunit CSTF3 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.93 E-value=2.9e-05 Score=71.32 Aligned_cols=104 Identities=7% Similarity=-0.068 Sum_probs=91.3
Q ss_pred hhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHH
Q 011519 378 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAAL 457 (484)
Q Consensus 378 a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~ 457 (484)
...+...+....+.|+++.|...|+++|+..|.....+|...+......|++++|...+.++++..|.....|...|...
T Consensus 99 ~~l~~~ya~~~~~~~~~~~a~~i~~~~l~~~~~~~~~~w~~~~~~~~~~~~~~~ar~i~~~al~~~~~~~~~~~~~a~~e 178 (308)
T d2onda1 99 MLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALME 178 (308)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Confidence 34566677888899999999999999999999823457999999999999999999999999999999999999999875
Q ss_pred -HHcCCHHHHHHHHHHHHhcccccc
Q 011519 458 -FALGKENEAQAALREASILENKKS 481 (484)
Q Consensus 458 -~~~~~~~~A~~~~~~al~l~~~~~ 481 (484)
...|+.+.|...|+++++.+|++.
T Consensus 179 ~~~~~~~~~a~~i~e~~l~~~p~~~ 203 (308)
T d2onda1 179 YYCSKDKSVAFKIFELGLKKYGDIP 203 (308)
T ss_dssp HHTSCCHHHHHHHHHHHHHHHTTCH
T ss_pred HHhccCHHHHHHHHHHHHHhhhhhH
Confidence 457899999999999999987653
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=97.93 E-value=3.1e-05 Score=73.81 Aligned_cols=76 Identities=13% Similarity=0.135 Sum_probs=49.4
Q ss_pred cccCCCCCCceEEEEEeC-CCcEEEEEEecC------CCC-ccHHHHHHHHHHHhcCC-C--CceeeeeeeeeeCCceEE
Q 011519 62 VSEHGEKAPNVVYKGKLE-NQFRIAVKRFNR------SAW-PDARQFLEEARAVGQLR-N--RRLANLLGCCCEGDERLL 130 (484)
Q Consensus 62 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~------~~~-~~~~~~~~E~~~l~~l~-h--pniv~l~~~~~~~~~~~l 130 (484)
++.+|.|....||++... +++.|+||.-.. ..+ ....+...|...|..+. + ..+++++.+ +.+..++
T Consensus 31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--d~~~~~l 108 (392)
T d2pula1 31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 108 (392)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEE--cCCCCEE
Confidence 357899999999999954 467899996432 111 12345567888887662 3 345666654 4556789
Q ss_pred EEecCCCCC
Q 011519 131 VAEYMPNDT 139 (484)
Q Consensus 131 v~Ey~~~gs 139 (484)
|||++++..
T Consensus 109 vmE~L~~~~ 117 (392)
T d2pula1 109 VMEDLSHLK 117 (392)
T ss_dssp EECCCTTSE
T ss_pred EEeccCCcc
Confidence 999997754
|
| >d2ff4a2 a.118.8.3 (A:105-283) Probable regulatory protein EmbR, middle domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: TPR-like family: BTAD-like domain: Probable regulatory protein EmbR, middle domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.89 E-value=2.5e-05 Score=65.64 Aligned_cols=70 Identities=16% Similarity=0.123 Sum_probs=63.5
Q ss_pred HHhhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHH-------HhcCCCC
Q 011519 376 QETLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQA-------QVISPVW 446 (484)
Q Consensus 376 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a-------l~~~p~~ 446 (484)
.....+...+..+.+.|++++|+..++++++++|. +..+|.+++.+|..+|++.+|+..|+++ +.++|..
T Consensus 65 ~~~~a~~~la~~~~~~g~~~~Al~~~~~al~~~P~-~e~~~~~l~~al~~~Gr~~eAl~~y~~~~~~L~~eLG~~P~~ 141 (179)
T d2ff4a2 65 DKVLAHTAKAEAEIACGRASAVIAELEALTFEHPY-REPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDPGP 141 (179)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCCCCH
T ss_pred HHHHHHHHHHHHHHHCCCchHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCcCH
Confidence 34566778999999999999999999999999999 9999999999999999999999999988 5677763
|
| >d1klxa_ a.118.18.1 (A:) Cysteine rich protein B (HcpB) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: HCP-like family: HCP-like domain: Cysteine rich protein B (HcpB) species: Helicobacter pylori [TaxId: 210]
Probab=97.88 E-value=8.1e-05 Score=58.97 Aligned_cols=85 Identities=12% Similarity=0.021 Sum_probs=74.2
Q ss_pred hccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHh----cCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHH----cC
Q 011519 390 RHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLM----SDMPQEALNDASQAQVISPVWHMAAYLQAAALFA----LG 461 (484)
Q Consensus 390 ~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~----~~ 461 (484)
...++++|+..|+++.+. . ++.+.+++|..|.. ..++++|+..+.++.+. +++.+.+++|.+|.. ..
T Consensus 35 ~~~~~~~a~~~~~~aa~~--g-~~~a~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa~~--g~~~a~~~Lg~~y~~G~gv~~ 109 (133)
T d1klxa_ 35 SQINKQKLFQYLSKACEL--N-SGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYAGKGVVK 109 (133)
T ss_dssp TTSCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCC
T ss_pred cccCHHHHHHHHhhhhcc--c-chhhhhhHHHhhhhccccchhhHHHHHHHhhhhcc--CcchHHHHHHHHHHcCCccCC
Confidence 456899999999999886 4 78899999999987 56799999999999876 689999999999987 57
Q ss_pred CHHHHHHHHHHHHhcccc
Q 011519 462 KENEAQAALREASILENK 479 (484)
Q Consensus 462 ~~~~A~~~~~~al~l~~~ 479 (484)
++++|+..|++|.++...
T Consensus 110 d~~~A~~~~~~Aa~~G~~ 127 (133)
T d1klxa_ 110 NEKQAVKTFEKACRLGSE 127 (133)
T ss_dssp CHHHHHHHHHHHHHTTCH
T ss_pred CHHHHHHHHHHHHHCCCH
Confidence 999999999999998754
|
| >d1ouva_ a.118.18.1 (A:) Cysteine rich protein C (HcpC) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: HCP-like family: HCP-like domain: Cysteine rich protein C (HcpC) species: Helicobacter pylori [TaxId: 210]
Probab=97.82 E-value=0.00011 Score=65.43 Aligned_cols=96 Identities=14% Similarity=0.147 Sum_probs=84.1
Q ss_pred hhhhhHhHHHHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHh----cCCHHHHHHHHHHHHhcCCCChHHHHHH
Q 011519 378 TLNSKKKGDVAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLM----SDMPQEALNDASQAQVISPVWHMAAYLQ 453 (484)
Q Consensus 378 a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~~~p~~~~a~~~~ 453 (484)
+.++...|..++++++|++|+..|++|.+. . +..+++++|.+|.. ..++..|+..+..+.... ++.+.+.+
T Consensus 2 p~~~~~lG~~~~~~~d~~~A~~~~~kAa~~--g-~~~A~~~Lg~~y~~G~~~~~d~~~a~~~~~~a~~~~--~~~a~~~l 76 (265)
T d1ouva_ 2 PKELVGLGAKSYKEKDFTQAKKYFEKACDL--K-ENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN--YSNGCHLL 76 (265)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHC--C-CHHHHHHHHHHHHcCCCcchhHHHHHHhhccccccc--ccchhhcc
Confidence 457889999999999999999999999876 4 78899999999998 678999999999987654 88999999
Q ss_pred HHHHHH----cCCHHHHHHHHHHHHhccc
Q 011519 454 AAALFA----LGKENEAQAALREASILEN 478 (484)
Q Consensus 454 g~~~~~----~~~~~~A~~~~~~al~l~~ 478 (484)
|.++.. ..+.+.|+..|+++.+.++
T Consensus 77 ~~~~~~~~~~~~~~~~a~~~~~~a~~~g~ 105 (265)
T d1ouva_ 77 GNLYYSGQGVSQNTNKALQYYSKACDLKY 105 (265)
T ss_dssp HHHHHHTSSSCCCHHHHHHHHHHHHHTTC
T ss_pred ccccccccccchhhHHHHHHHhhhhhhhh
Confidence 998876 5789999999999988764
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=97.61 E-value=4.7e-05 Score=70.51 Aligned_cols=95 Identities=21% Similarity=0.169 Sum_probs=58.0
Q ss_pred ccccCHHHHHHHhcCC---CcccccccCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCCCce--
Q 011519 41 FCEYSIETLRTATSGF---AMENIVSEHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRNRRL-- 115 (484)
Q Consensus 41 ~~~~~~~~~~~~~~~f---~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpni-- 115 (484)
|..++.+.+..+...+ .+..+. .|+ +.-..||+++.++|+.|++|+.+.... ..+++..|...+..|....|
T Consensus 5 f~~L~pd~i~~al~~~g~~~~~~~~-~L~-s~EN~vy~v~~~dg~~~VlK~~rp~~~-s~~~i~~E~~~l~~L~~~gipv 81 (325)
T d1zyla1 5 FQTLHPDTIMDALFEHGIRVDSGLT-PLN-SYENRVYQFQDEDRRRFVVKFYRPERW-TADQILEEHQFALQLVNDEVPV 81 (325)
T ss_dssp CCCCCHHHHHHHHHHTTCCCCSCCE-EEC-CSSSEEEEECCTTCCCEEEEEECTTTS-CHHHHHHHHHHHHHHHHTTCSB
T ss_pred ccccCHHHHHHHHHHcCCCCCcCcc-ccc-cccceeEEEEcCCCCEEEEEEeCCCCC-CHHHHHHHHHHHHHHHhcCCCC
Confidence 4455666665554332 122222 233 334689999999999999999876533 35667888888877742222
Q ss_pred ---eeee--eeeeeCCceEEEEecCCCC
Q 011519 116 ---ANLL--GCCCEGDERLLVAEYMPND 138 (484)
Q Consensus 116 ---v~l~--~~~~~~~~~~lv~Ey~~~g 138 (484)
+..- ..+...+..+.++++++|.
T Consensus 82 ~~p~~~~g~~~~~~~~~~~~l~~~~~G~ 109 (325)
T d1zyla1 82 AAPVAFNGQTLLNHQGFYFAVFPSVGGR 109 (325)
T ss_dssp CCCCCBTTBSCEEETTEEEEEEECCCCE
T ss_pred CCceecCCCeeeeeeeEEEEEEeecCCc
Confidence 1111 1224456678999999764
|
| >d1ouva_ a.118.18.1 (A:) Cysteine rich protein C (HcpC) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: HCP-like family: HCP-like domain: Cysteine rich protein C (HcpC) species: Helicobacter pylori [TaxId: 210]
Probab=97.45 E-value=0.0004 Score=61.65 Aligned_cols=99 Identities=16% Similarity=0.138 Sum_probs=81.8
Q ss_pred HhhhhhHhHHHHHh----ccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHh----cCCHHHHHHHHHHHHhcCCCChH
Q 011519 377 ETLNSKKKGDVAFR----HKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLM----SDMPQEALNDASQAQVISPVWHM 448 (484)
Q Consensus 377 ~a~~~~~~g~~~~~----~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~----~~~~~~A~~~~~~al~~~p~~~~ 448 (484)
....+...|..+.. ..+...+...++++.+. . ++.+.+++|.+|.. ..++++|+..+.+|.+. +++.
T Consensus 141 ~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~a~~~--g-~~~A~~~lg~~y~~g~~~~~d~~~A~~~~~~aa~~--g~~~ 215 (265)
T d1ouva_ 141 DGDGCTILGSLYDAGRGTPKDLKKALASYDKACDL--K-DSPGCFNAGNMYHHGEGATKNFKEALARYSKACEL--ENGG 215 (265)
T ss_dssp CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--T-CHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHT--TCHH
T ss_pred ccchhhhhhhhhccCCCcccccccchhhhhccccc--c-ccccccchhhhcccCcccccchhhhhhhHhhhhcc--cCHH
Confidence 34455666776664 56778888888988864 4 78899999999998 67899999999999988 5799
Q ss_pred HHHHHHHHHHH----cCCHHHHHHHHHHHHhccccc
Q 011519 449 AAYLQAAALFA----LGKENEAQAALREASILENKK 480 (484)
Q Consensus 449 a~~~~g~~~~~----~~~~~~A~~~~~~al~l~~~~ 480 (484)
|++++|.+|.. ..++++|+..|++|.++++.+
T Consensus 216 a~~~LG~~y~~G~g~~~n~~~A~~~~~kAa~~g~~~ 251 (265)
T d1ouva_ 216 GCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKG 251 (265)
T ss_dssp HHHHHHHHHHTTSSSSCCSTTHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHcCCCCccCHHHHHHHHHHHHHCcCHH
Confidence 99999999986 458999999999999987543
|
| >d1klxa_ a.118.18.1 (A:) Cysteine rich protein B (HcpB) {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: HCP-like family: HCP-like domain: Cysteine rich protein B (HcpB) species: Helicobacter pylori [TaxId: 210]
Probab=97.19 E-value=0.00066 Score=53.42 Aligned_cols=80 Identities=13% Similarity=-0.001 Sum_probs=66.6
Q ss_pred cCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHH----cCCHHHHH
Q 011519 392 KDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFA----LGKENEAQ 467 (484)
Q Consensus 392 ~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~----~~~~~~A~ 467 (484)
+++++|+..|++|.+.. ++.+.++++. ....++++|+..+.++.+. +++.+++.+|..|.. ..++++|+
T Consensus 7 kd~~~A~~~~~kaa~~g---~~~a~~~l~~--~~~~~~~~a~~~~~~aa~~--g~~~a~~~Lg~~y~~g~~~~~d~~~A~ 79 (133)
T d1klxa_ 7 KDLKKAIQYYVKACELN---EMFGCLSLVS--NSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKAA 79 (133)
T ss_dssp HHHHHHHHHHHHHHHTT---CTTHHHHHHT--CTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHH
T ss_pred cCHHHHHHHHHHHHHCC---Chhhhhhhcc--ccccCHHHHHHHHhhhhcc--cchhhhhhHHHhhhhccccchhhHHHH
Confidence 58899999999999885 3445666653 4567899999999999875 689999999999986 56899999
Q ss_pred HHHHHHHhccc
Q 011519 468 AALREASILEN 478 (484)
Q Consensus 468 ~~~~~al~l~~ 478 (484)
+.|++|.+.+.
T Consensus 80 ~~~~~aa~~g~ 90 (133)
T d1klxa_ 80 QYYSKACGLND 90 (133)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHhhhhccCc
Confidence 99999998753
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=97.05 E-value=0.0009 Score=63.37 Aligned_cols=73 Identities=15% Similarity=0.252 Sum_probs=50.6
Q ss_pred cccCCCCCCceEEEEEeCC--------CcEEEEEEecCCCCccHHHHHHHHHHHhcCC-CCceeeeeeeeeeCCceEEEE
Q 011519 62 VSEHGEKAPNVVYKGKLEN--------QFRIAVKRFNRSAWPDARQFLEEARAVGQLR-NRRLANLLGCCCEGDERLLVA 132 (484)
Q Consensus 62 ~~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~l~~~~~~~~~~~lv~ 132 (484)
++.|+-|-...+|++...+ ...|.+++.... .......+|..+++.+. +.-..++++++.. ++|+
T Consensus 47 v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~~--~~~idr~~E~~i~~~ls~~gl~Pkll~~~~~----g~I~ 120 (395)
T d1nw1a_ 47 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE 120 (395)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred EEEcCCccccceEEEEeCCCCccccCCCCcEEEEecCCc--chhhHHHHHHHHHHHHHhCCCCCeEEEEcCC----ceEE
Confidence 4677889999999998543 345777776532 22334568888888884 4445577777643 7899
Q ss_pred ecCCCCCH
Q 011519 133 EYMPNDTL 140 (484)
Q Consensus 133 Ey~~~gsL 140 (484)
||++|.+|
T Consensus 121 efi~g~~l 128 (395)
T d1nw1a_ 121 EYIPSRPL 128 (395)
T ss_dssp CCCCEEEC
T ss_pred EEeccccC
Confidence 99987544
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=96.96 E-value=0.0006 Score=62.38 Aligned_cols=158 Identities=11% Similarity=0.030 Sum_probs=82.9
Q ss_pred cCHHHHHHHhcCCCcccccc--cCCCCCCceEEEEEeCCCcEEEEEEecCCCCccHHHHHHHHHHHhcCCC-----Ccee
Q 011519 44 YSIETLRTATSGFAMENIVS--EHGEKAPNVVYKGKLENQFRIAVKRFNRSAWPDARQFLEEARAVGQLRN-----RRLA 116 (484)
Q Consensus 44 ~~~~~~~~~~~~f~~~~~~~--~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-----pniv 116 (484)
.+.+++......|.-.++.+ .|..|--.+.|+.+..+| .+++|+..... +.+.+..|+.++..|.. |..+
T Consensus 3 ls~~el~~~l~~Y~lg~~~~~~~i~~G~~N~ny~v~t~~g-~yVLri~~~~~--~~~~l~~~~~~l~~L~~~g~pvp~pi 79 (316)
T d2ppqa1 3 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPL 79 (316)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred CCHHHHHHHHHhCCCCCceEeecCCCCcccCeEEEEECCC-cEEEEEcCCCC--CHHHHHHHHHHHHhhhhccccccccc
Confidence 46677777777665434443 355677788999998766 48999986532 22334456666666532 2222
Q ss_pred eee-e--eeeeCCceEEEEecCCCCCHHhh--------------hc----cCC---CCCCCH------------------
Q 011519 117 NLL-G--CCCEGDERLLVAEYMPNDTLAKH--------------LF----HWE---TQPMKW------------------ 154 (484)
Q Consensus 117 ~l~-~--~~~~~~~~~lv~Ey~~~gsL~~~--------------l~----~~~---~~~l~~------------------ 154 (484)
... | +....+....++.++.+...... ++ ... ......
T Consensus 80 ~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (316)
T d2ppqa1 80 PRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVE 159 (316)
T ss_dssp CBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTS
T ss_pred eecCCCcceeeecccceeeeecccccccccchhHHHHHHHHHHhhhhhhhhcccccccccchhhcchhhhHHHHhhhhcc
Confidence 211 1 11223455667777765432110 00 000 000000
Q ss_pred HHHHHHHHHHHHHHHHhhc---CCCcccccccccceeecCCCCceeeccCCcc
Q 011519 155 AMRLRVALHIAEALEYCTS---KERALYHDLNAYRIVFDDDVNPRLSCFGLMK 204 (484)
Q Consensus 155 ~~~~~i~~qi~~~L~~lH~---~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~ 204 (484)
......+..+...+.-.+. ..|+||+|+.+.||+++.+...-|.||+.+.
T Consensus 160 ~~~~~~l~~~~~~~~~~~~~~L~~giIHgDl~~dNvl~~~~~v~gvIDF~~~~ 212 (316)
T d2ppqa1 160 KGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 212 (316)
T ss_dssp TTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhHHHHHHHHHHhhhccCccccccccccCCcchhhhhcccccceeEecccccc
Confidence 0111222222233333222 1479999999999999988777899999764
|
| >d2crba1 a.7.16.1 (A:8-90) Nuclear receptor binding factor 2, NRBF2, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Spectrin repeat-like superfamily: MIT domain-like family: MIT domain domain: Nuclear receptor binding factor 2, NRBF2, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=90.83 E-value=0.15 Score=34.58 Aligned_cols=34 Identities=12% Similarity=0.322 Sum_probs=28.3
Q ss_pred hhHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHh
Q 011519 373 GQMQETLNSKKKGDVAFRHKDFRASIECYTQFID 406 (484)
Q Consensus 373 ~~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~ 406 (484)
.+.+.|-.+-.+++.+.+.|+|++||+++.+|.+
T Consensus 3 sPLN~AH~~~RrAer~l~~~rydeAIech~kA~~ 36 (83)
T d2crba1 3 GPLNLAHQQSRRADRLLAAGKYEEAISCHRKATT 36 (83)
T ss_dssp THHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred ChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3567777888899999999999999999877753
|
| >d1qsaa1 a.118.5.1 (A:1-450) 70 KDa soluble lytic transglycosylase (SLT70), superhelical domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Bacterial muramidases family: Bacterial muramidases domain: 70 KDa soluble lytic transglycosylase (SLT70), superhelical domain species: Escherichia coli [TaxId: 562]
Probab=82.95 E-value=2.9 Score=38.79 Aligned_cols=87 Identities=15% Similarity=0.025 Sum_probs=63.7
Q ss_pred HHHhccCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHcCCHHHH
Q 011519 387 VAFRHKDFRASIECYTQFIDVGTMVSPTAFARRSLSYLMSDMPQEALNDASQAQVISPVWHMAAYLQAAALFALGKENEA 466 (484)
Q Consensus 387 ~~~~~~~~~~A~~~~~~ai~~~p~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~~~~~~A 466 (484)
.++..+..+.|...+........+ ......++...+..+++..+...+...-.-....+.+.|.+|.++..+|+.++|
T Consensus 261 ~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~w~~~~al~~~~~~~~~~~~~~l~~~~~~~~r~~YW~gRa~~~~G~~~~A 338 (450)
T d1qsaa1 261 RLMGNDVTDEQAKWRDDAIMRSQS--TSLIERRVRMALGTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGREAEA 338 (450)
T ss_dssp TSCSTTCCHHHHHHHHHHHHTCCC--HHHHHHHHHHHHHHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHcCchHHHHHHHHhhcccccc--hHHHHHHHHHHHHcCChHHHHHHHHhcCcccccHHHHHHHHHHHHHHcCChhhH
Confidence 334566778888887777665544 333333444456678999998888765443345589999999999999999999
Q ss_pred HHHHHHHHh
Q 011519 467 QAALREASI 475 (484)
Q Consensus 467 ~~~~~~al~ 475 (484)
...|..+..
T Consensus 339 ~~~~~~~a~ 347 (450)
T d1qsaa1 339 KEILHQLMQ 347 (450)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHhc
Confidence 999998764
|
| >d1wfda_ a.7.14.1 (A:) Hypothetical protein 1500032H18Rik {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Spectrin repeat-like superfamily: MIT domain family: MIT domain domain: Hypothetical protein 1500032H18Rik species: Mouse (Mus musculus) [TaxId: 10090]
Probab=82.51 E-value=0.68 Score=32.74 Aligned_cols=34 Identities=15% Similarity=0.281 Sum_probs=28.4
Q ss_pred hHHHhhhhhHhHHHHHhccCHHHHHHHHHHHHhc
Q 011519 374 QMQETLNSKKKGDVAFRHKDFRASIECYTQFIDV 407 (484)
Q Consensus 374 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~ 407 (484)
....|..+.++|..+=+.|+|++|+..|.+||+.
T Consensus 11 ~~~~A~~l~~~Av~~D~~g~y~eA~~~Y~~aie~ 44 (93)
T d1wfda_ 11 DSTAAVAVLKRAVELDAESRYQQALVCYQEGIDM 44 (93)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 4567888888899999999999999999988753
|