BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011527
(484 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B1ZUW6|SYH_OPITP Histidine--tRNA ligase OS=Opitutus terrae (strain DSM 11246 /
PB90-1) GN=hisS PE=3 SV=1
Length = 437
Score = 260 bits (665), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 153/420 (36%), Positives = 228/420 (54%), Gaps = 14/420 (3%)
Query: 78 GTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFED 137
G R+F P+ + RN +F +++ + FGF E D PVLE L+ K+G+EI QL+ F D
Sbjct: 9 GFREFYPDALARRNHIFRLWRQTAVAFGFAEYDAPVLEPLELYKTKSGDEIEAQLFSFTD 68
Query: 138 RGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMDI 197
+G R VALRPE+TP++ R+V K ++ P+KWF++ + +RYER +GR R +Q+N D+
Sbjct: 69 KGGREVALRPEMTPTVCRMVGAKANALKRPIKWFSIAEYYRYERAQKGRERAFFQFNADL 128
Query: 198 IGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKVCII 257
P AE ELI+ + K G+T D R+S R + L + E V
Sbjct: 129 FAEPGPEAEIELIALLTQCLKAFGLTEQDFYIRLSDRNLWFFYLEALGLDEPRIRAVLSA 188
Query: 258 IDKIEKLPLDVIKNDLKSAGMSEAAIEE-LLRVLSIKSLTELE-------GEAVA----D 305
+DK EK+ D K + G + A+++ +L L IK+L LE GE +A D
Sbjct: 189 VDKFEKVGDDAFKPYAEQFGPLDLALKQRVLEFLQIKTLASLEQTLAPLGGEKLAARLGD 248
Query: 306 LKLLFSLAEKFGYSDWIQFDASVVRGLAYYTGIVFECFDRDGKLRAICGGGRYDQLLSTF 365
+ L G S +I+ D VVRGLAYYTG VFE FDR G+LRAI GGGRY+ L+
Sbjct: 249 WRKLLDGLAAMGLSPFIEVDLGVVRGLAYYTGFVFEAFDRKGELRAIAGGGRYNDLVKKL 308
Query: 366 GGDDIPACGFGFGDAVILELLKEKGLLPPLNHQVENIVCALDHNLQGAASMV-ATTLRGK 424
GG D+PA GF GD + LL +GL+P Q ++ C + + A+ LR
Sbjct: 309 GGPDLPAVGFAIGDVTLGLLLDARGLMPAF-VQASDVYCVIGGAAERQAAFADVNALRAA 367
Query: 425 GQSVDLVLESKPLKWVFKRAARINAQRLILVGTTEWQKGMVGVKILSSGEQYEIKLDELE 484
G VD L+ P FK AA A+ ++ G E K +V ++ L++ + ++ ++++
Sbjct: 368 GFKVDYPLKDVPFGKQFKLAADSGAKLALIYGPDELAKNVVKLRDLTTRTETDVPREQVQ 427
>sp|Q9HLX5|SYH_THEAC Histidine--tRNA ligase OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=hisS PE=1 SV=1
Length = 426
Score = 258 bits (660), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 149/426 (34%), Positives = 237/426 (55%), Gaps = 19/426 (4%)
Query: 68 LQKIDVNPPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEE 127
+ ++ + +G RDF PEDM + ++F +E + FGF +DFP LE L+ K+GEE
Sbjct: 1 MYRLQIEKIRGFRDFYPEDMDVEKFIFKTAEEAAEAFGFRRIDFPSLEYLDLYRIKSGEE 60
Query: 128 IRDQLYCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRR 187
+ Q Y F D+G R V L PE TPS R+V + K + PL+W++ + WRYE GR
Sbjct: 61 LLQQTYSFVDKGGREVTLIPEATPSTVRMVTSR-KDLQRPLRWYSFPKVWRYEEPQAGRY 119
Query: 188 REHYQWNMDIIGVPAVTAEAELISSIITFFKRIGITASDV-GFRISSRKVLQEVL--RCH 244
REHYQ+N DI G + A+AE+I+ + R+G+ D+ RI+SRK+++E++
Sbjct: 120 REHYQFNADIFGSDSPEADAEVIALASSILDRLGL--QDIYEIRINSRKIMEEIIGGMTS 177
Query: 245 SIPEHLFGKVCIIIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLS----IKSLTELEG 300
S P +F IID+ K+ + + L+SAG+ E + + + S I + + G
Sbjct: 178 SDPFSVFS----IIDRYHKISREEFVDQLRSAGIGEDGVSMIADLCSGTRGIDEMARITG 233
Query: 301 ---EAVADLKLLFSLAEKFGYSDWIQFDASVVRGLAYYTGIVFECFDRDGKLRAICGGGR 357
E +A + + L +G + +++D S+VRGL+YYTGIVFE +DR G+ RAI GGGR
Sbjct: 234 KSSEEIARMAAVEDLLASYGVKN-VRYDFSIVRGLSYYTGIVFEAYDRSGQFRAILGGGR 292
Query: 358 YDQLLSTFGGDDIPACGFGFGDAVILELLKEKGLLPPLNHQVENIVCALDHNLQGAASMV 417
YD L S G+ +PA GFG GDAVI LLK + + P + +C + +
Sbjct: 293 YDNLASLMSGESVPAVGFGMGDAVISLLLKRENVQIP-REKKSVYICRVGKINSSIMNEY 351
Query: 418 ATTLRGKGQSVDLVLESKPLKWVFKRAARINAQRLILVGTTEWQKGMVGVKILSSGEQYE 477
+ LR +G +V + + + L K A+ I A ++ G + ++G+V ++ + +G Q
Sbjct: 352 SRKLRERGMNVTVEIMERGLSAQLKYASAIGADFAVIFGERDLERGVVTIRNMYTGSQEN 411
Query: 478 IKLDEL 483
+ LD +
Sbjct: 412 VGLDSV 417
>sp|Q5UXW4|SYH_HALMA Histidine--tRNA ligase OS=Haloarcula marismortui (strain ATCC 43049
/ DSM 3752 / JCM 8966 / VKM B-1809) GN=hisS PE=3 SV=1
Length = 435
Score = 256 bits (653), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 145/419 (34%), Positives = 229/419 (54%), Gaps = 21/419 (5%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
KG RDF P++M+ R W ++V++ +GF E+ P LE +++ K+GEEI ++LY FE
Sbjct: 6 KGFRDFYPKEMQARRWAMDTLEDVAQRYGFREIGTPALEPTEMYVDKSGEEIVEELYSFE 65
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
D+G R+VAL PELTP++AR+ + K + +S P+KW + WRYE +GR RE YQ N+D
Sbjct: 66 DKGGRKVALTPELTPTVARMFVAKQQELSKPIKWVSTRPFWRYEEPQQGRFREFYQTNVD 125
Query: 197 IIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCH----SIPEHLFG 252
I G TA+AE+++ + +G+T D R+S R +L VL +PE +
Sbjct: 126 IFGSAEPTADAEILAVAVDMLTDLGLTGEDFEIRVSHRDILSGVLESFEADVDVPEAIRA 185
Query: 253 KVCIIIDKIEKLPLDVIKNDLKSAGMSEA---AIEELLRVLS--IKSLTELEGE-----A 302
+DK K+ D + L AG+S +E+L++ + I++L +L G A
Sbjct: 186 -----VDKRAKVDHDEYLDALAEAGLSYGQADTFDEMLQIDAEEIETLGDLTGSEDVRTA 240
Query: 303 VADLKLLFSLAEKFGYSDWIQFDASVVRGLAYYTGIVFECFDRDGKL-RAICGGGRYDQL 361
+L+ + AE FG + + + RGL YYTG+VFECFD G++ R++ GGGRYD L
Sbjct: 241 TDNLQAVLDAAEDFGVREHLTVSLTTARGLDYYTGVVFECFDSTGEVSRSVFGGGRYDDL 300
Query: 362 LSTFGGDDIPACGFGFGDAVILELLKEKGLLPPLNHQVENIVCALDHNLQGAASMVATTL 421
+ FGG PA GF G A + L + G+ P + V + + + A+ +A L
Sbjct: 301 IEGFGGQPTPAVGFAPGHATLQLLCQRAGVWPAEELSTDYYVLQV-GDTRPTAARIARDL 359
Query: 422 RGKGQSVDLVLESKPLKWVFKRAARINAQRLILVGTTEWQKGMVGVKILSSGEQYEIKL 480
R +G V+ + + A INA+ +++VG + + V +K + GEQ + L
Sbjct: 360 RERGHVVESDVADRSFGAQMGYADGINAETVVIVGEQDLENDEVTLKEMDDGEQVSVPL 418
>sp|Q97CE6|SYH_THEVO Histidine--tRNA ligase OS=Thermoplasma volcanium (strain ATCC 51530
/ DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) GN=hisS PE=3
SV=1
Length = 426
Score = 249 bits (636), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 149/417 (35%), Positives = 229/417 (54%), Gaps = 17/417 (4%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
KG RDF PEDM + ++F V+ +GF+ +DFP LE L+ K+GEE+ +Q Y F
Sbjct: 7 KGFRDFYPEDMEIEKFIFETASSVAESYGFKRIDFPSLEYIDLYRIKSGEELLNQTYSFT 66
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
DRG R V L PE TPS R++ + K ++ P++W++ + WRYE GR REHYQ+N D
Sbjct: 67 DRGGREVTLIPEATPSTVRMLTSR-KDIAKPVRWYSFPKVWRYEEPQAGRFREHYQFNAD 125
Query: 197 IIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKVCI 256
I G A+AE+IS +G++ + R++SR +++++L I + V
Sbjct: 126 IFGPSNEEADAEIISLASGILDGLGLSGA-YEIRVNSRIMMEDILNGMGIADPY--TVFS 182
Query: 257 IIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIKS----LTELEG-----EAVADLK 307
I+D+ K+ + +DL S G+SE + R+ S S ++ L G +A L
Sbjct: 183 IVDRFHKVSKETFVDDLMSVGLSEENSNTIYRMCSEASEPGGISGLFGSGKVSKAAERLI 242
Query: 308 LLFSLAEKFGYSDWIQFDASVVRGLAYYTGIVFECFDRDGKLRAICGGGRYDQLLSTFGG 367
+ +++G +++D S+VRGL+YYTG+VFE +D+ G+ RAI GGGRYD L F
Sbjct: 243 RTIDILKEYGVKS-VKYDFSIVRGLSYYTGLVFEAYDKSGQFRAILGGGRYDNLAKLFSE 301
Query: 368 DDIPACGFGFGDAVILELLKEKGLLPPLNHQVENI-VCALDHNLQGAASMVATTLRGKGQ 426
DIPA GFG GDAVI LLK KG+ P H +++ VC + + ++ LR G
Sbjct: 302 QDIPAVGFGMGDAVISLLLKSKGVKAP--HAKKSVYVCRVGTVKAERIASISKMLRSSGF 359
Query: 427 SVDLVLESKPLKWVFKRAARINAQRLILVGTTEWQKGMVGVKILSSGEQYEIKLDEL 483
V + + L K A+ + ++ G + + V V+ LS+GEQ + L +L
Sbjct: 360 IVSAEIMDRSLSSQLKYASYEGCEYAVIAGERDLENNSVTVRDLSTGEQEIVTLGDL 416
>sp|B0SQQ4|SYH_LEPBP Histidine--tRNA ligase OS=Leptospira biflexa serovar Patoc (strain
Patoc 1 / ATCC 23582 / Paris) GN=hisS PE=3 SV=1
Length = 437
Score = 249 bits (635), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 152/428 (35%), Positives = 225/428 (52%), Gaps = 19/428 (4%)
Query: 69 QKIDVNPPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEI 128
QK+ KGTRDF PEDMRLRN+LF ++V R +G+EE D P++ES L+ K GEEI
Sbjct: 4 QKLTTENYKGTRDFYPEDMRLRNYLFSVMKDVVRSYGYEEYDGPMVESLDLYRAKTGEEI 63
Query: 129 -RDQLYCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRR 187
Q+Y F D+G+R VA+RPE+TP++AR+V +K + + P++WF++ WRYE+ GR
Sbjct: 64 VGKQIYNFIDKGDREVAIRPEMTPTVARMVAKKLRELPRPIRWFSIPNLWRYEQPGHGRL 123
Query: 188 REHYQWNMDIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVL------ 241
REH+Q N+D+ GV + AE E++S G + IS R +L E L
Sbjct: 124 REHWQLNVDMFGVTSSRAELEILSLACDILFAFGAPKNSFKVTISHRSLLDEFLLDGLKV 183
Query: 242 ---RCHSIPEHLFGKVCIIIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIKSLTEL 298
+ H + + L K I D+ L I ND S+ +S+ +L ++ SL ++
Sbjct: 184 SPNQAHEVSKILDKKNKITQDEYVALVTKTIPND--SSAVSKI---DLFLNATVNSLNQI 238
Query: 299 EG---EAVADLKLLFSLAEKFGYSDWIQFDASVVRGLAYYTGIVFECFDRDGK-LRAICG 354
G E +A +K LF + G SD I FD SVVRG YYTG +FE FD + R++ G
Sbjct: 239 PGIKEETLAAIKGLFEDIKTIGLSDIIHFDPSVVRGFDYYTGFIFEIFDTSPQNKRSLYG 298
Query: 355 GGRYDQLLSTFGGDDIPACGFGFGDAVILELLKEKGLLPPLNHQVENIVCALDHNLQGAA 414
GGRYD L+ F +++ GFG GD + L LLP + LD +
Sbjct: 299 GGRYDNLIGLFSNEELTGIGFGLGDVTLQNFLTAHNLLPNFASDTTVFIPLLDDSSFAEN 358
Query: 415 SMVATTLRGKGQSVDLVLESKPLKWVFKRAARINAQRLILVGTTEWQKGMVGVKILSSGE 474
A LR + S ++ L S+ + A + + ++L G E + V +K ++S
Sbjct: 359 HNFAKELRKEKISAEVSLVSQKMGKQLSYAEKKGYRWILLRGEDEIKTNTVTLKDMASRN 418
Query: 475 QYEIKLDE 482
Q+ E
Sbjct: 419 QFTFSFSE 426
>sp|B0SH39|SYH_LEPBA Histidine--tRNA ligase OS=Leptospira biflexa serovar Patoc (strain
Patoc 1 / Ames) GN=hisS PE=3 SV=1
Length = 437
Score = 249 bits (635), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 152/428 (35%), Positives = 225/428 (52%), Gaps = 19/428 (4%)
Query: 69 QKIDVNPPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEI 128
QK+ KGTRDF PEDMRLRN+LF ++V R +G+EE D P++ES L+ K GEEI
Sbjct: 4 QKLTTENYKGTRDFYPEDMRLRNYLFSVMKDVVRSYGYEEYDGPMVESLDLYRAKTGEEI 63
Query: 129 -RDQLYCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRR 187
Q+Y F D+G+R VA+RPE+TP++AR+V +K + + P++WF++ WRYE+ GR
Sbjct: 64 VGKQIYNFIDKGDREVAIRPEMTPTVARMVAKKLRELPRPIRWFSIPNLWRYEQPGHGRL 123
Query: 188 REHYQWNMDIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVL------ 241
REH+Q N+D+ GV + AE E++S G + IS R +L E L
Sbjct: 124 REHWQLNVDMFGVTSSRAELEILSLACDILFAFGAPKNSFKVTISHRSLLDEFLLDGLKV 183
Query: 242 ---RCHSIPEHLFGKVCIIIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIKSLTEL 298
+ H + + L K I D+ L I ND S+ +S+ +L ++ SL ++
Sbjct: 184 SPNQAHEVSKILDKKNKITQDEYVALVTKTIPND--SSAVSKI---DLFLNATVNSLNQI 238
Query: 299 EG---EAVADLKLLFSLAEKFGYSDWIQFDASVVRGLAYYTGIVFECFDRDGK-LRAICG 354
G E +A +K LF + G SD I FD SVVRG YYTG +FE FD + R++ G
Sbjct: 239 PGIKEETLAAIKGLFEDIKTIGLSDIIHFDPSVVRGFDYYTGFIFEIFDTSPQNKRSLYG 298
Query: 355 GGRYDQLLSTFGGDDIPACGFGFGDAVILELLKEKGLLPPLNHQVENIVCALDHNLQGAA 414
GGRYD L+ F +++ GFG GD + L LLP + LD +
Sbjct: 299 GGRYDNLIGLFSNEELTGIGFGLGDVTLQNFLTAHNLLPNFASDTTVFIPLLDDSSFAEN 358
Query: 415 SMVATTLRGKGQSVDLVLESKPLKWVFKRAARINAQRLILVGTTEWQKGMVGVKILSSGE 474
A LR + S ++ L S+ + A + + ++L G E + V +K ++S
Sbjct: 359 HNFAKELRKEKISAEVSLVSQKMGKQLSYAEKKGYRWILLRGEDEIKTNTVTLKDMASRN 418
Query: 475 QYEIKLDE 482
Q+ E
Sbjct: 419 QFTFSFSE 426
>sp|Q3IMP5|SYH_NATPD Histidine--tRNA ligase OS=Natronomonas pharaonis (strain DSM 2160 /
ATCC 35678) GN=hisS PE=3 SV=1
Length = 432
Score = 243 bits (621), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 141/413 (34%), Positives = 222/413 (53%), Gaps = 11/413 (2%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
KG R+F P +M R + + +R +GF EV P LE L++ K+GEEI ++LY FE
Sbjct: 6 KGFREFYPGEMSARREVTDTIETRARRYGFREVGTPALERTQLYVDKSGEEIVEELYAFE 65
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
D+G R V+L PELTP++AR+V+ K ++++ P+KWF+ WRYE++ +GR RE YQ N+D
Sbjct: 66 DKGGREVSLTPELTPTVARMVVAKQQALAKPVKWFSTRPFWRYEQVQQGRFREFYQTNID 125
Query: 197 IIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKVCI 256
I G A+AE++++ +G+ +D FR+S R +L +L +
Sbjct: 126 IFGSERPEADAEVLATAADALTDLGLDGADFEFRVSHRDILGGLLAAMDSDVDTTDAIR- 184
Query: 257 IIDKIEKLPLDVIKNDLKSAGMSEA---AIEELLRVLSIKSLTELEGE-----AVADLKL 308
+DK EK+ + ++ L AG++ + LLR + L E G AV +L+
Sbjct: 185 AVDKREKIDDEEYRSLLVGAGLTHEEADTFDSLLRTDDLSELVEFAGTDRVEAAVENLQA 244
Query: 309 LFSLAEKFGYSDWIQFDASVVRGLAYYTGIVFECFDRDGKL-RAICGGGRYDQLLSTFGG 367
+ A FG ++ RGL YYTG+VFECFD G++ R++ GGGRYD L+ +FGG
Sbjct: 245 VLDAAADFGVREFCSVSLETARGLDYYTGVVFECFDTSGEVSRSVFGGGRYDDLIESFGG 304
Query: 368 DDIPACGFGFGDAVILELLKEKGLLPPLNHQVENIVCALDHNLQGAASMVATTLRGKGQS 427
PA G G G + L + G+ P + V + + + A VA LR G
Sbjct: 305 QPTPAVGVGIGHETLSLLCQRAGVWPAEELSTDYYVLTV-GDTRDVALDVARELRALGHV 363
Query: 428 VDLVLESKPLKWVFKRAARINAQRLILVGTTEWQKGMVGVKILSSGEQYEIKL 480
V+ L + A INA+ +++VG + + V +K ++SG+Q ++ L
Sbjct: 364 VETDLSDRGFGDQLSYADGINAETVVVVGEQDLEDDAVTLKDMASGDQTQVPL 416
>sp|Q04X87|SYH_LEPBL Histidine--tRNA ligase OS=Leptospira borgpetersenii serovar
Hardjo-bovis (strain L550) GN=hisS PE=3 SV=1
Length = 439
Score = 243 bits (620), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 139/410 (33%), Positives = 228/410 (55%), Gaps = 9/410 (2%)
Query: 75 PPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRD-QLY 133
P KGTRDF PE+MRLRNW+F +E FG+EE D P+LES L+ K+GEEI + QLY
Sbjct: 12 PYKGTRDFYPEEMRLRNWMFSIMRETVLSFGYEEYDGPILESFDLYKAKSGEEIVERQLY 71
Query: 134 CFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQW 193
F D+G RRVA+RPE+TP+LAR+V +++ P++WF++ WRYE+ +GR REH+Q
Sbjct: 72 DFIDKGERRVAIRPEMTPTLARMVAGNLRNLPRPVRWFSIPNLWRYEQPGKGRLREHWQL 131
Query: 194 NMDIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCH-SIPEHLFG 252
N+D+ GV AE E++ + K+ G ++S RK+L L+ + +H
Sbjct: 132 NVDLFGVDTHRAELEILLMADSILKKFGAPTGSYQIKVSHRKLLDSFLKNSLKLSDHQVH 191
Query: 253 KVCIIIDKIEKLPLDV----IKNDLKSAGMSEAAIEELL--RVLSIKSLTELEGEAVADL 306
V ++DK K+ + IK L + + IE L + ++ ++ ++ +++ +
Sbjct: 192 GVSKLLDKKSKISPETFEAEIKPLLNNFNEQFSLIETYLASNLETVSTIPGIDPDSIHFI 251
Query: 307 KLLFSLAEKFGYSDWIQFDASVVRGLAYYTGIVFECFDRDGK-LRAICGGGRYDQLLSTF 365
+ LF + G + FD S++RG YYTG +FE FD + + R++ GGGRYD L+ F
Sbjct: 252 RNLFQELGELGIDKQLVFDPSIIRGFDYYTGCIFEVFDTNPENRRSLYGGGRYDNLIGLF 311
Query: 366 GGDDIPACGFGFGDAVILELLKEKGLLPPLNHQVENIVCALDHNLQGAASMVATTLRGKG 425
+ + GFG GD + L+ L+P L+ + + +D ++ ++ LR G
Sbjct: 312 SKEQLSGIGFGLGDVTLKSFLENHNLIPDLSREKTLFLPIMDESIFVDTFKLSKELRENG 371
Query: 426 QSVDLVLESKPLKWVFKRAARINAQRLILVGTTEWQKGMVGVKILSSGEQ 475
+ +L+S + + A + + ++ +G +E + V +K L SGEQ
Sbjct: 372 ILTETMLDSAKIGKQIQVAEKKGYRYVLFLGESEIRTETVQIKDLVSGEQ 421
>sp|Q04WC4|SYH_LEPBJ Histidine--tRNA ligase OS=Leptospira borgpetersenii serovar
Hardjo-bovis (strain JB197) GN=hisS PE=3 SV=1
Length = 439
Score = 243 bits (620), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 139/410 (33%), Positives = 228/410 (55%), Gaps = 9/410 (2%)
Query: 75 PPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRD-QLY 133
P KGTRDF PE+MRLRNW+F +E FG+EE D P+LES L+ K+GEEI + QLY
Sbjct: 12 PYKGTRDFYPEEMRLRNWMFSIMRETVLSFGYEEYDGPILESFDLYKAKSGEEIVERQLY 71
Query: 134 CFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQW 193
F D+G RRVA+RPE+TP+LAR+V +++ P++WF++ WRYE+ +GR REH+Q
Sbjct: 72 DFIDKGERRVAIRPEMTPTLARMVAGNLRNLPRPVRWFSIPNLWRYEQPGKGRLREHWQL 131
Query: 194 NMDIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCH-SIPEHLFG 252
N+D+ GV AE E++ + K+ G ++S RK+L L+ + +H
Sbjct: 132 NVDLFGVDTHRAELEILLMADSILKKFGAPTGSYQIKVSHRKLLDSFLKNSLKLSDHQVH 191
Query: 253 KVCIIIDKIEKLPLDV----IKNDLKSAGMSEAAIEELL--RVLSIKSLTELEGEAVADL 306
V ++DK K+ + IK L + + IE L + ++ ++ ++ +++ +
Sbjct: 192 GVSKLLDKKSKISPETFEAEIKPLLNNFNEQFSLIETYLASNLETVSTIPGIDPDSIHFI 251
Query: 307 KLLFSLAEKFGYSDWIQFDASVVRGLAYYTGIVFECFDRDGK-LRAICGGGRYDQLLSTF 365
+ LF + G + FD S++RG YYTG +FE FD + + R++ GGGRYD L+ F
Sbjct: 252 RNLFQELGELGIDKQLVFDPSIIRGFDYYTGCIFEVFDTNPENRRSLYGGGRYDNLIGLF 311
Query: 366 GGDDIPACGFGFGDAVILELLKEKGLLPPLNHQVENIVCALDHNLQGAASMVATTLRGKG 425
+ + GFG GD + L+ L+P L+ + + +D ++ ++ LR G
Sbjct: 312 SKEQLSGIGFGLGDVTLKSFLENHNLIPDLSREKTLFLPIMDESIFVDTFKLSKELRENG 371
Query: 426 QSVDLVLESKPLKWVFKRAARINAQRLILVGTTEWQKGMVGVKILSSGEQ 475
+ +L+S + + A + + ++ +G +E + V +K L SGEQ
Sbjct: 372 ILTETMLDSAKIGKQIQVAEKKGYRYVLFLGESEIRTETVQIKDLVSGEQ 421
>sp|Q8U431|SYH_PYRFU Histidine--tRNA ligase OS=Pyrococcus furiosus (strain ATCC 43587 /
DSM 3638 / JCM 8422 / Vc1) GN=hisS PE=3 SV=1
Length = 432
Score = 243 bits (619), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 144/421 (34%), Positives = 230/421 (54%), Gaps = 18/421 (4%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
KGTRDF PE+M R W+F +E +GF+EV P +E LF ++GEE+ QLY F+
Sbjct: 6 KGTRDFLPEEMVKRRWVFERIRERFETYGFKEVLTPTMEYTKLFELRSGEEVVKQLYAFK 65
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
D+G R V+LRP++T S+ARL + ++ P+KW+ + +RYE GR RE +Q ++
Sbjct: 66 DKGGRDVSLRPDMTSSVARLYVNMFQTAPKPIKWYYIANMFRYEEPQSGRYREFWQAGVE 125
Query: 197 IIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKVCI 256
+IG V A+AE+I+ + + G+ V I R +L E + + + + +
Sbjct: 126 LIGSDKVEADAEVIALFVESYLATGLREFTVN--IGDRILLDEFAKMLGVKDDI--GLMR 181
Query: 257 IIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIKS-------------LTELEGEAV 303
IIDK +KLP + N LK G+ + IE++L +++IK +E+ +
Sbjct: 182 IIDKKDKLPQEDFINALKEFGLDKNGIEKVLELINIKGKPDEVLPLAEELFTSEVAKNEI 241
Query: 304 ADLKLLFSLAEKFGYSDWIQFDASVVRGLAYYTGIVFECF-DRDGKLRAICGGGRYDQLL 362
L L L E + DWI+ D + RG YYT IVFE D + +I GGGRYD L+
Sbjct: 242 NRLYALIDLLEAYEVKDWIRIDLGIARGFDYYTSIVFEAIAPNDLGIGSIGGGGRYDNLI 301
Query: 363 STFGGDDIPACGFGFGDAVILELLKEKGLLPPLNHQVENIVCALDHNLQGAASMVATTLR 422
FGG PA GF G ++ +L+ KGL+P + + V + ++ A +AT+LR
Sbjct: 302 EVFGGKPTPATGFAIGIERLIPILEAKGLIPEVQIAPDVYVVPIGERMKKVAIRIATSLR 361
Query: 423 GKGQSVDLVLESKPLKWVFKRAARINAQRLILVGTTEWQKGMVGVKILSSGEQYEIKLDE 482
G ++ L + LK A ++ ++ I+VG + ++G+V V+ + SGEQ E+K+D+
Sbjct: 362 KSGIKTEIELMGRKLKKAMDYANKVGVKKTIIVGEKDLERGVVTVRDMESGEQNEVKIDD 421
Query: 483 L 483
+
Sbjct: 422 I 422
>sp|O58028|SYH_PYRHO Histidine--tRNA ligase OS=Pyrococcus horikoshii (strain ATCC 700860
/ DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=hisS
PE=3 SV=1
Length = 431
Score = 237 bits (604), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 148/421 (35%), Positives = 228/421 (54%), Gaps = 19/421 (4%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
KGTRDF PEDM R W+F +EV +GF+E+ PV+E LF ++GEE+ QLY F+
Sbjct: 6 KGTRDFLPEDMAKRRWVFEKIREVFEAYGFKEILTPVMEYTKLFQLRSGEEVVKQLYAFK 65
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
D+G R V+LRP++T S+ARL + + P+KW+ + +RYE GR RE +Q ++
Sbjct: 66 DKGGRDVSLRPDMTSSVARLYVNSFQMAPKPIKWYYIANMFRYEEPQSGRYREFWQAGVE 125
Query: 197 IIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKVCI 256
+IG V A+AE+I+ + + G+ D I R +L E + + + +
Sbjct: 126 LIGSDKVEADAEVIALFVESYLSTGL--RDFTVNIGDRILLDEFAGMLGVSDDI--GLMR 181
Query: 257 IIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIKSL-------------TELEGEAV 303
IIDK +KL + N LK G+ E+ IE++L ++ IK ++ E +
Sbjct: 182 IIDKRDKLSQEEFINLLKEFGLGESEIEKVLELVEIKGRPDNVLPLAEELFKSKKAKEEI 241
Query: 304 ADLKLLFSLAEKFGYSDWIQFDASVVRGLAYYTGIVFECFD-RDGKLRAICGGGRYDQLL 362
+ L L L E +G DWI+ D + RG YYT IVFE + + +I GGGRYD L+
Sbjct: 242 SKLYKLTDLLEWYGVKDWIRIDLGIARGFDYYTSIVFEAISPNELGIGSIGGGGRYDNLI 301
Query: 363 STFGGDDIPACGFGFGDAVILELLKEKGLLPPLNHQVENIVCALDHNLQGAASMVATTLR 422
FGG PA GF G +L +L+ KGL+P E V L +++ A +A LR
Sbjct: 302 EIFGGKPTPATGFAIGIERLLPILEWKGLIPKPQTGPEVFVIPL-KDMEKVAINIAVKLR 360
Query: 423 GKGQSVDLVLESKPLKWVFKRAARINAQRLILVGTTEWQKGMVGVKILSSGEQYEIKLDE 482
+ D+ L + L A R+ A+ +I+VG + ++G+V ++ + SGEQY + L+E
Sbjct: 361 REKIKTDIELSGRKLGKALDYANRVGAKLVIIVGKRDVERGVVTIRDMESGEQYNVSLNE 420
Query: 483 L 483
+
Sbjct: 421 I 421
>sp|P62371|SYH_LEPIC Histidine--tRNA ligase OS=Leptospira interrogans serogroup
Icterohaemorrhagiae serovar copenhageni (strain Fiocruz
L1-130) GN=hisS PE=3 SV=1
Length = 439
Score = 236 bits (602), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 139/412 (33%), Positives = 222/412 (53%), Gaps = 13/412 (3%)
Query: 75 PPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRD-QLY 133
P KGTRDF PEDMRLRNW+F +E FG+EE D P+LES L+ K+GEEI + QLY
Sbjct: 12 PYKGTRDFYPEDMRLRNWMFSVMRETVLSFGYEEYDGPILESFDLYKAKSGEEIVERQLY 71
Query: 134 CFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQW 193
F D+G RRVA+RPE+TP+LAR+V +++ P++WF++ WRYE+ +GR REH+Q
Sbjct: 72 DFIDKGERRVAIRPEMTPTLARMVAGNLRNLPKPVRWFSIPNLWRYEQPGKGRLREHWQL 131
Query: 194 NMDIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLR---------CH 244
N+D+ GV + AE E++ + K+ G ++S RK+L L+ H
Sbjct: 132 NVDLFGVDSHRAELEILLIADSILKKFGAPIGSYQIKVSHRKLLDSFLKNSLKLNGDQVH 191
Query: 245 SIPEHLFGKVCIIIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIKSLTELEGEAVA 304
+ + L K I + E + N + + E + L +S + ++ +V+
Sbjct: 192 GVSKLLDKKSKISSEAFETEMKPFLNNFKEQFSLIETYLNSNLETVS--KIPGIDTNSVS 249
Query: 305 DLKLLFSLAEKFGYSDWIQFDASVVRGLAYYTGIVFECFDRDGK-LRAICGGGRYDQLLS 363
++ LF + G + FD S++RG YYTG +FE FD + + R++ GGGRYD L+
Sbjct: 250 FIQNLFQELGELGIDKQLLFDPSIIRGFDYYTGCIFEVFDTNPENRRSLYGGGRYDNLIG 309
Query: 364 TFGGDDIPACGFGFGDAVILELLKEKGLLPPLNHQVENIVCALDHNLQGAASMVATTLRG 423
F + + GFG GD + L+ L+P L+ + + +D +L ++ LR
Sbjct: 310 LFSKEQLSGIGFGLGDVTLKNFLEGHNLIPNLSREKTIFLPIMDESLFVDTFKLSKELRE 369
Query: 424 KGQSVDLVLESKPLKWVFKRAARINAQRLILVGTTEWQKGMVGVKILSSGEQ 475
+ +L+S + + A + + ++ +G +E + V +K L SGEQ
Sbjct: 370 NEILTETMLDSAKIGKQIQIAEKKGYRYVLFLGESEIRTETVQIKDLISGEQ 421
>sp|Q8F9Y3|SYH_LEPIN Histidine--tRNA ligase OS=Leptospira interrogans serogroup
Icterohaemorrhagiae serovar Lai (strain 56601) GN=hisS
PE=3 SV=1
Length = 439
Score = 236 bits (601), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 139/412 (33%), Positives = 222/412 (53%), Gaps = 13/412 (3%)
Query: 75 PPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRD-QLY 133
P KGTRDF PEDMRLRNW+F +E FG+EE D P+LES L+ K+GEEI + QLY
Sbjct: 12 PYKGTRDFYPEDMRLRNWMFSVMRETVLSFGYEEYDGPILESFDLYKAKSGEEIVERQLY 71
Query: 134 CFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQW 193
F D+G RRVA+RPE+TP+LAR+V +++ P++WF++ WRYE+ +GR REH+Q
Sbjct: 72 DFIDKGERRVAIRPEMTPTLARMVAGNLRNLPKPVRWFSIPNLWRYEQPGKGRLREHWQL 131
Query: 194 NMDIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLR---------CH 244
N+D+ GV + AE E++ + K+ G ++S RK+L L+ H
Sbjct: 132 NVDLFGVDSHRAELEILLIADSILKKFGAPIGSYQIKVSHRKLLDSFLKNSLKLNGDQVH 191
Query: 245 SIPEHLFGKVCIIIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIKSLTELEGEAVA 304
+ + L K I + E + N + + E + L +S + ++ +V+
Sbjct: 192 GVSKLLDKKSKISPEAFETEMKPFLNNFKEQFSLIETYLNSNLETVS--KIPGIDTNSVS 249
Query: 305 DLKLLFSLAEKFGYSDWIQFDASVVRGLAYYTGIVFECFDRDGK-LRAICGGGRYDQLLS 363
++ LF + G + FD S++RG YYTG +FE FD + + R++ GGGRYD L+
Sbjct: 250 FIQNLFQELGELGIDKQLLFDPSIIRGFDYYTGCIFEVFDTNPENRRSLYGGGRYDNLIG 309
Query: 364 TFGGDDIPACGFGFGDAVILELLKEKGLLPPLNHQVENIVCALDHNLQGAASMVATTLRG 423
F + + GFG GD + L+ L+P L+ + + +D +L ++ LR
Sbjct: 310 LFSKEQLSGIGFGLGDVTLKNFLEGHNLIPNLSREKTIFLPIMDESLFVDTFKLSKELRE 369
Query: 424 KGQSVDLVLESKPLKWVFKRAARINAQRLILVGTTEWQKGMVGVKILSSGEQ 475
+ +L+S + + A + + ++ +G +E + V +K L SGEQ
Sbjct: 370 NEILTETMLDSAKIGKQIQIAEKKGYRYVLFLGESEIRTETVQIKDLISGEQ 421
>sp|Q9HNP5|SYH_HALSA Histidine--tRNA ligase OS=Halobacterium salinarum (strain ATCC
700922 / JCM 11081 / NRC-1) GN=hisS PE=3 SV=1
Length = 432
Score = 233 bits (595), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 143/408 (35%), Positives = 215/408 (52%), Gaps = 11/408 (2%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
KG RDF P +M R ++ + +GF EV P +E +++ K+G EI D+LY F
Sbjct: 6 KGFRDFYPAEMGPRRAAIDAIEDAAASYGFREVGTPAMERTEMYVDKSGAEIVDELYSFT 65
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
D+G R VAL PELTP++AR+V+ K +++S P+KW++ WRYE +GR RE YQ N+D
Sbjct: 66 DQGGRDVALTPELTPTVARMVVAKQQALSKPIKWYSSRPFWRYEEPQQGRFREFYQTNLD 125
Query: 197 IIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKVCI 256
I G A+AE+++ +G+T +D FR+S R +L +L +
Sbjct: 126 IFGTSDPRADAEVLAVAADGLTSLGLTGADFEFRVSHRDILGGLLAAFDATVDTEAAIR- 184
Query: 257 IIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIKSL--------TELEGEAVADLKL 308
+DK EK+ +DL +AG+S E+ +L L T+ +AVA+L+
Sbjct: 185 TVDKREKIERAAYLDDLAAAGLSYDQAEQFDDLLDGDDLDALVSFAGTDRVRDAVANLRN 244
Query: 309 LFSLAEKFGYSDWIQFDASVVRGLAYYTGIVFECFDRDGKL-RAICGGGRYDQLLSTFGG 367
+ AE G + + RGL YYTG+VFECFD G + RA+ GGGRYD L+ FGG
Sbjct: 245 VLDAAETLGVRQYCDVSLTTARGLDYYTGVVFECFDSTGDVGRAVFGGGRYDDLIERFGG 304
Query: 368 DDIPACGFGFGDAVILELLKEKGLLPPLNHQVENIVCALDHNLQGAASMVATTLRGKGQS 427
PA G G A + LL+ G+LP + V + + A+ VA+ LR +G
Sbjct: 305 QPTPAVGVAPGHATLNLLLENAGVLPDDEFTPDYYVLQV-GDTDAEAADVASALRERGNR 363
Query: 428 VDLVLESKPLKWVFKRAARINAQRLILVGTTEWQKGMVGVKILSSGEQ 475
VD + + A + A +++VG + G V +K ++SGEQ
Sbjct: 364 VDTDITGRSFGAQMNYADNVGADTVVIVGEQDLADGNVTIKNMASGEQ 411
>sp|B0R6V2|SYH_HALS3 Histidine--tRNA ligase OS=Halobacterium salinarum (strain ATCC
29341 / DSM 671 / R1) GN=hisS PE=3 SV=1
Length = 432
Score = 233 bits (595), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 143/408 (35%), Positives = 215/408 (52%), Gaps = 11/408 (2%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
KG RDF P +M R ++ + +GF EV P +E +++ K+G EI D+LY F
Sbjct: 6 KGFRDFYPAEMGPRRAAIDAIEDAAASYGFREVGTPAMERTEMYVDKSGAEIVDELYSFT 65
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
D+G R VAL PELTP++AR+V+ K +++S P+KW++ WRYE +GR RE YQ N+D
Sbjct: 66 DQGGRDVALTPELTPTVARMVVAKQQALSKPIKWYSSRPFWRYEEPQQGRFREFYQTNLD 125
Query: 197 IIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKVCI 256
I G A+AE+++ +G+T +D FR+S R +L +L +
Sbjct: 126 IFGTSDPRADAEVLAVAADGLTSLGLTGADFEFRVSHRDILGGLLAAFDATVDTEAAIR- 184
Query: 257 IIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIKSL--------TELEGEAVADLKL 308
+DK EK+ +DL +AG+S E+ +L L T+ +AVA+L+
Sbjct: 185 TVDKREKIERAAYLDDLAAAGLSYDQAEQFDDLLDGDDLDALVSFAGTDRVRDAVANLRN 244
Query: 309 LFSLAEKFGYSDWIQFDASVVRGLAYYTGIVFECFDRDGKL-RAICGGGRYDQLLSTFGG 367
+ AE G + + RGL YYTG+VFECFD G + RA+ GGGRYD L+ FGG
Sbjct: 245 VLDAAETLGVRQYCDVSLTTARGLDYYTGVVFECFDSTGDVGRAVFGGGRYDDLIERFGG 304
Query: 368 DDIPACGFGFGDAVILELLKEKGLLPPLNHQVENIVCALDHNLQGAASMVATTLRGKGQS 427
PA G G A + LL+ G+LP + V + + A+ VA+ LR +G
Sbjct: 305 QPTPAVGVAPGHATLNLLLENAGVLPDDEFTPDYYVLQV-GDTDAEAADVASALRERGNR 363
Query: 428 VDLVLESKPLKWVFKRAARINAQRLILVGTTEWQKGMVGVKILSSGEQ 475
VD + + A + A +++VG + G V +K ++SGEQ
Sbjct: 364 VDTDITGRSFGAQMNYADNVGADTVVIVGEQDLADGNVTIKNMASGEQ 411
>sp|Q18DQ2|SYH_HALWD Histidine--tRNA ligase OS=Haloquadratum walsbyi (strain DSM 16790)
GN=hisS PE=3 SV=1
Length = 434
Score = 231 bits (589), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 132/415 (31%), Positives = 218/415 (52%), Gaps = 11/415 (2%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
KG RDF P +M R + + + +GF EV P LE +++ K+GE I ++LY F
Sbjct: 6 KGFRDFYPPEMTARRQVIDILETTATQYGFREVGTPTLEQTQMYVDKSGEGIEEELYAFS 65
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
D G R V L PELTP++AR+V+ K +++S P+KW + WRYE++ +GR RE YQ N+D
Sbjct: 66 DDGGRDVTLIPELTPTVARMVVDKQQALSKPIKWVSTRPFWRYEQVQQGRFREFYQTNVD 125
Query: 197 IIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKVCI 256
I G A+AE+++ + +G+TASD FR+S R +L +L + +
Sbjct: 126 IFGTADPIADAEILAFAADALRNLGLTASDFEFRVSHRDILSGLLASITNDDADIDTRAA 185
Query: 257 I--IDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIKSLTELE-------GEAVADLK 307
I +DK K+ L AG+S + +L+ L E+ AV +L+
Sbjct: 186 IRAVDKRAKIEQAEYHGLLTDAGLSYDQAQSFDDLLTTADLDEIATVGNDIVTTAVQNLR 245
Query: 308 LLFSLAEKFGYSDWIQFDASVVRGLAYYTGIVFECFDRDGKL-RAICGGGRYDQLLSTFG 366
+ + + G ++ + RGL YYTG+VFECFD G++ R++ GGGRYD L+ +FG
Sbjct: 246 SVLAAVDDLGVGEFCDISLTTARGLDYYTGVVFECFDATGEVSRSVFGGGRYDNLIESFG 305
Query: 367 GDDIPACGFGFGDAVILELLKEKGLLPPLNHQVENIVCALDHNLQGAASMVATTLRGKGQ 426
G PA G G A + L + G+ P + + + + + A+ +A LR
Sbjct: 306 GQPTPAVGVAPGLAPLSLLCQRAGVWPTEELTTDYYILTV-GDTRSVATRIARELRVNKN 364
Query: 427 SVDLVLESKPLKWVFKRAARINAQRLILVGTTEWQKGMVGVKILSSGEQYEIKLD 481
+V++ + + A INA+ +I+VG + + + +K ++SG+Q + ++
Sbjct: 365 TVEIDIADRSFGAQMGYADSINAETVIIVGERDLENDEITIKDMNSGDQTTVPVE 419
>sp|Q9UY31|SYH_PYRAB Histidine--tRNA ligase OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=hisS PE=3 SV=1
Length = 431
Score = 229 bits (583), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 144/421 (34%), Positives = 223/421 (52%), Gaps = 19/421 (4%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
KGTRDF PE+M R W+F +EV +GF+EV PV+E LF ++GEE+ QLY F+
Sbjct: 6 KGTRDFLPEEMVKRRWVFEKIREVFETYGFKEVLTPVMEYTKLFQLRSGEEVVKQLYAFK 65
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
D+G R VALRP++T S+ARL + ++ P+KW+ + +RYE GR RE +Q ++
Sbjct: 66 DKGGRDVALRPDMTSSVARLYVNSFQTAPKPIKWYYIANMFRYEEPQSGRYREFWQAGVE 125
Query: 197 IIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKVCI 256
+IG + A+AE+I+ + + G+ D I R +L E + + + + +
Sbjct: 126 LIGSDKIEADAEVIALFVDSYLSTGL--KDFTVNIGDRVLLDEFAKMLGVKDDI--GLMR 181
Query: 257 IIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIKS-------------LTELEGEAV 303
IIDK +KL + L G+ E IE++L ++ IK +E E +
Sbjct: 182 IIDKKDKLSQEEFLKALGEFGLDENGIEKVLNLIEIKGKPDDVLPLAEELFTSERAKEEI 241
Query: 304 ADLKLLFSLAEKFGYSDWIQFDASVVRGLAYYTGIVFECF-DRDGKLRAICGGGRYDQLL 362
+ L L + + +WIQ D + RG YYT IVFE D + +I GGGRYD L+
Sbjct: 242 SRLYNLVDILSWYEVDEWIQIDLGIARGFDYYTSIVFEAIVPNDLGIGSIGGGGRYDNLI 301
Query: 363 STFGGDDIPACGFGFGDAVILELLKEKGLLPPLNHQVENIVCALDHNLQGAASMVATTLR 422
FGG PA GF G ++ +L+ KGLLP L + V + + + A+ + T LR
Sbjct: 302 EVFGGKPTPATGFAIGIERLIPILEWKGLLPELKAGPDVFVIPVGDS-RDVATAIVTRLR 360
Query: 423 GKGQSVDLVLESKPLKWVFKRAARINAQRLILVGTTEWQKGMVGVKILSSGEQYEIKLDE 482
G D+ L + L+ A RI + I+VG + ++G+V ++ L SG Q E+ +D
Sbjct: 361 KAGIRSDIELSGRKLRKALDYANRIGVRLSIIVGKRDLERGVVTIRDLESGNQVEVPVDN 420
Query: 483 L 483
+
Sbjct: 421 V 421
>sp|B9LRS2|SYH_HALLT Histidine--tRNA ligase OS=Halorubrum lacusprofundi (strain ATCC
49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=hisS PE=3 SV=1
Length = 442
Score = 227 bits (579), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 140/422 (33%), Positives = 231/422 (54%), Gaps = 21/422 (4%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
KG RDF P + R + ++ + +GF E+ P LE +++ K+GEEI ++LY FE
Sbjct: 6 KGFRDFYPGEQSARREVTDAIEDAASRYGFREIATPALERTEMYVDKSGEEIVEELYAFE 65
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
D+G R V++ PELTP++AR+V+ KG+ +S P+KW + WRYE++ +GR RE YQ N+D
Sbjct: 66 DKGGRGVSMTPELTPTVARMVVAKGQELSKPIKWMSTRPFWRYEQVQQGRFREFYQTNID 125
Query: 197 IIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRC-HSIPEHLFGKVC 255
+ G A A+AE+++ +G+T D FR+S R +L ++R + P+ + K
Sbjct: 126 VFGSSAPEADAEVLAVAADALTDLGLTNDDFEFRVSHRDILGGLVRALAADPDAVDTKAA 185
Query: 256 I-IIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLS-------IKSLTELEGE----AV 303
I +DK K+ L AG+ A +E ++S + ++ E GE AV
Sbjct: 186 IRAVDKRAKVDDGEYLGLLSDAGLDRATAQEFDDLISDVETVDDLDAVAEAGGEDVEAAV 245
Query: 304 ADLKLLFSLAEKFGYSDWIQFDASVVRGLAYYTGIVFECFDRDGKL-RAICGGGRYDQLL 362
+L+ + + A+ FG + + + RGL YYTG+VFECFD G++ R++ GGGRYD L+
Sbjct: 246 ENLRNVLAAADDFGAGAFCEVSLTTARGLDYYTGVVFECFDSTGEVSRSVFGGGRYDDLI 305
Query: 363 STFGGDDIPACGFGFGDAVILELLKEKGLLPPLNHQVENIVCALDHNLQGAASMVATTLR 422
+FGG PA G G A + L + G+ P + V ++ + + A+ +A LR
Sbjct: 306 ESFGGQPTPAVGVAPGHAPLSLLCQRAGVWPDEELTTDYYVLSV-GDTRSEATALARDLR 364
Query: 423 GKGQSVDLVLE----SKPLKWVFKRAARINAQRLILVGTTEWQKGMVGVKILSSGEQYEI 478
G D+V+E + A INA+ +++VG + + G VK ++SG++ +
Sbjct: 365 ALGD--DVVVEQDVSGRSFGAQLGYADSINAETVVVVGERDLENGEYTVKDMASGDETTV 422
Query: 479 KL 480
+
Sbjct: 423 PV 424
>sp|Q6L1Q5|SYH_PICTO Histidine--tRNA ligase OS=Picrophilus torridus (strain ATCC 700027
/ DSM 9790 / JCM 10055 / NBRC 100828) GN=hisS PE=3 SV=1
Length = 423
Score = 225 bits (573), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 144/419 (34%), Positives = 217/419 (51%), Gaps = 20/419 (4%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
KG RD P+DM +R + + FG++ +DFP LES L+ K+G E+ +Q + F
Sbjct: 7 KGFRDHYPDDMEIRYDFIKKMMDTAISFGYKMIDFPSLESMDLYRLKSGTELVEQTFSFT 66
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
D+G R V + PE TPS R++ + K + +P +WF++ + WRYE GR REH Q+N D
Sbjct: 67 DKGGREVTMIPEATPSTMRMLTSR-KDIKMPARWFSIPKVWRYEEPQEGRYREHIQFNAD 125
Query: 197 IIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLR--CHSIPEHLFGKV 254
+ G + A+AE+I T +G++ ++ R +++ +LR + P LF
Sbjct: 126 MFGADSPEADAEIIGLAATILDNLGLSGQ-YEINVNDRYLMELILRDLGSNNPVDLFP-- 182
Query: 255 CIIIDKIEKLPL-DVIKNDLKS--AGMSEAAIEELLRVLSIKSLTELEG-------EAVA 304
+ID+ +K+ L D K LK SE I L+ + I + L E V
Sbjct: 183 --VIDRFKKMDLTDFKKRLLKDLDDDASEKLISLLMNRIDINDVERLLNGYANDVMERVK 240
Query: 305 DLKLLFSLAEKFGYSDWIQFDASVVRGLAYYTGIVFECFDRDGKLRAICGGGRYDQLLST 364
LK F+L K+ S + D SVVRGL+YYTGIVFE FD G+LRAI GGGRYD L +
Sbjct: 241 RLKDTFALTSKYTKSK-LNIDLSVVRGLSYYTGIVFEAFDISGELRAILGGGRYDNLSNL 299
Query: 365 FGGDDIPACGFGFGDAVILELLKEKGLLPPLNHQVENIVCALDHNLQGAASMVATTLRGK 424
F + IPA GF GDAVI LLK L + + V + + + ++ +RG
Sbjct: 300 FINESIPAVGFAIGDAVIELLLKRNNLWNYKDKRKRYYVVNISSSPEAHIEIL-NKIRGS 358
Query: 425 GQSVDLVLESKPLKWVFKRAARINAQRLILVGTTEWQKGMVGVKILSSGEQYEIKLDEL 483
G + + ++ + K A I LI++G E + +K L + EQ E+ +D+
Sbjct: 359 GNIAISEVNKRRMQTIIKYAESIKCDFLIIIGDRELSSKKMTIKNLRTQEQAEMNIDDF 417
>sp|Q5JIM2|SYH_PYRKO Histidine--tRNA ligase OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=hisS PE=3 SV=1
Length = 436
Score = 215 bits (548), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 134/419 (31%), Positives = 222/419 (52%), Gaps = 20/419 (4%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
KGTRD PE+M R W+F +EV F F+EV P E LF ++GEE+ QLY F+
Sbjct: 8 KGTRDLLPEEMAKRRWVFERIREVFEGFNFQEVLTPTFEYTELFKLRSGEEVVKQLYAFQ 67
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
D+G R ++LRP++T S+ARL + + ++ P+KW+ + +RYE GR RE +Q ++
Sbjct: 68 DKGGRDISLRPDMTSSVARLYVNRFQNAPKPIKWYYIANMFRYEEPQSGRYREFWQAGVE 127
Query: 197 IIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKVCI 256
+IG V A+AE+I+ + +G+ D I R +L E + + + + +
Sbjct: 128 LIGSDRVEADAEVIALFTQSYLAVGL--EDFTVNIGDRILLDEFAKMLGVEDDI--GLMR 183
Query: 257 IIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIKSLTE----------LEGEAVADL 306
+IDK +K+ + L+ G+++ +E++L ++ IK L + EA A++
Sbjct: 184 LIDKKDKMSREEFVGALREFGLNDDGVEKVLSLIEIKGLPDEVLPKAEELFTSEEAKAEI 243
Query: 307 KLLFSLA---EKFGYSDWIQFDASVVRGLAYYTGIVFECF-DRDGKLRAICGGGRYDQLL 362
K L+ L + +G S W++ D + RG YYT +VFE D + +I GGGRYD L+
Sbjct: 244 KRLYELVDLLDAYGVSKWVRIDLGIARGFDYYTSVVFEAIAPNDLGIGSIGGGGRYDNLI 303
Query: 363 STFGGDDIPACGFGFGDAVILELLKEKGLLPPLNHQVENIVCAL--DHNLQGAASMVATT 420
FGG PA GF G ++ +L+ KGLLP + + + V + D ++ A +
Sbjct: 304 EVFGGKPTPATGFAIGIERLIPILEWKGLLPEIKLRPDVYVIPIGDDREVKKTAIEITQG 363
Query: 421 LRGKGQSVDLVLESKPLKWVFKRAARINAQRLILVGTTEWQKGMVGVKILSSGEQYEIK 479
LR D+ L + L+ A ++ ++LVG + + G V ++ + SGEQ I+
Sbjct: 364 LREATVRADIELTGRKLRKALDYAGKLGVPYVVLVGKKDLEAGKVTLRDMKSGEQKSIE 422
>sp|Q58406|SYH_METJA Histidine--tRNA ligase OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=hisS PE=3 SV=1
Length = 416
Score = 209 bits (531), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 139/423 (32%), Positives = 221/423 (52%), Gaps = 32/423 (7%)
Query: 76 PKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCF 135
P+GTRDF PE+M+ R ++ + +EV +G++E+ P ES L +K GEEIR QLY F
Sbjct: 8 PRGTRDFLPEEMKKRRFVENKLREVFERYGYKEILTPTFESFELIAKKTGEEIRKQLYVF 67
Query: 136 EDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNM 195
+D G R +ALRPE+T + R + + K++ PL+ + C+RYER GR RE +Q
Sbjct: 68 KDHGGREMALRPEMTSPVVRFYLNELKNLQKPLRLYYFANCFRYERPQAGRFREFWQMGC 127
Query: 196 DIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKVC 255
++IG A+AE+++ + IG+ D I VL+ VL ++ E K+
Sbjct: 128 ELIGCKEPLADAEVLNLAMDGLINIGL---DFDVHIGHLGVLKGVLEKFNVSEEEEVKIR 184
Query: 256 IIIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIK-------SLTELEGEAVADLKL 308
+IDK + L + + + E E + +L K L E+ + ++
Sbjct: 185 RLIDKEDYDNLKIYLTQI----LGEEKKELIFEILKFKGSREVLDELKEILKDFPKSMEA 240
Query: 309 LFSLAE--KFGYSDWIQFDASVVRGLAYYTGIVFECFDRDGKLRAICGGGRYDQLLSTFG 366
+ +L E +F D + + RGL YYTG+VFE + + G + ICGGGRYD L+ TFG
Sbjct: 241 INNLEEILEFVIHDKYTINLGIARGLDYYTGMVFEIYGKKGA-KQICGGGRYDNLIETFG 299
Query: 367 GDDIPACGFGFG-DAVI-----LELLKEKGLLPPLNHQVENIVCALDHNLQGAASMVATT 420
G+ PA GF +G D ++ L++ +E L+ P+ D L + ++A
Sbjct: 300 GEPTPAVGFAYGFDRIMMNIDDLDIEEESILIIPVKK---------DKELIKKSLIIADK 350
Query: 421 LRGKGQSVDLVLESKPLKWVFKRAARINAQRLILVGTTEWQKGMVGVKILSSGEQYEIKL 480
LR G+ V+L + + L+ A +++I+VG E +G V VK + +GEQ I +
Sbjct: 351 LRKAGKIVELEIMGRKLRKALDYANSRGFKKVIIVGEKELNEGKVTVKDMITGEQKLIGI 410
Query: 481 DEL 483
DEL
Sbjct: 411 DEL 413
>sp|A4G0V7|SYH_METM5 Histidine--tRNA ligase OS=Methanococcus maripaludis (strain C5 /
ATCC BAA-1333) GN=hisS PE=3 SV=1
Length = 418
Score = 201 bits (512), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 138/425 (32%), Positives = 216/425 (50%), Gaps = 33/425 (7%)
Query: 76 PKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCF 135
PKGTRDF PE+M+ R + ++V + F E++ P ES L +K G+EIR QL+ F
Sbjct: 7 PKGTRDFLPEEMKKRKVIEKKLRKVFDSYNFSEINTPTFESFELLSKKTGDEIRTQLFVF 66
Query: 136 EDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNM 195
+D GNR + LRPELT S+AR I + K+ P+K + C+RYE GR RE +Q
Sbjct: 67 KDHGNREMGLRPELTSSVARFYINEFKNTPKPVKLYYFTNCFRYENPQAGRYREFWQMGS 126
Query: 196 DIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKVC 255
++IG A+AE+I+ I K I + D I VL+ V + + + ++
Sbjct: 127 ELIGSKKPIADAEVINMAIDGLKEINM---DFEINIGHLGVLKGVFEKYDLSDDEGTEIR 183
Query: 256 IIIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIK-----------SLTELEGEAVA 304
+IDK + L + + ++S E + +++ VL +K L E E +V
Sbjct: 184 RLIDKEDMEGLKTVLSRIESEKNIEIS-KKVFEVLELKGGREVISKLKEKLAEFES-SVE 241
Query: 305 DLKLLFSLAEKFGYSDWIQFDASVVRGLAYYTGIVFECFDRDGKLRAICGGGRYDQLLST 364
L+ L S+ E + I F + RGL YYTG+VFE + + R +CGGGRYD L+
Sbjct: 242 ALENLDSILEFVPHEYIINF--GIARGLDYYTGMVFEIYGKREGARQVCGGGRYDNLIEL 299
Query: 365 FGGDDIPACGFGFG-DAVILELLKEKGLLPPLNHQVEN-----IVCALDHNLQGAASMVA 418
F G+ PA GF +G D ++L + + QVE + L +A
Sbjct: 300 FEGEPSPAVGFAYGFDRIMLNI---------DDFQVEEEAIFVVPVKSSDMLLNECFKIA 350
Query: 419 TTLRGKGQSVDLVLESKPLKWVFKRAARINAQRLILVGTTEWQKGMVGVKILSSGEQYEI 478
TLR G+SV+L L + L A +++++VG + +G V +K + +GEQ I
Sbjct: 351 KTLRDAGKSVELDLMGRKLNKALNYANNKGIKKVLIVGENDISEGKVALKNMETGEQSLI 410
Query: 479 KLDEL 483
+L+++
Sbjct: 411 ELNDI 415
>sp|P60921|SYH_METMP Histidine--tRNA ligase OS=Methanococcus maripaludis (strain S2 /
LL) GN=hisS PE=3 SV=1
Length = 416
Score = 201 bits (511), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 136/425 (32%), Positives = 218/425 (51%), Gaps = 33/425 (7%)
Query: 76 PKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCF 135
PKGTRDF PE+M+ R + ++V + F E++ P ES L +K G+EIR QL+ F
Sbjct: 5 PKGTRDFLPEEMKKRKTIEKKLRKVFDSYNFSEINTPTFESFELLSKKTGDEIRTQLFVF 64
Query: 136 EDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNM 195
D G+R + LRPELT S+AR I + K+ P+K + C+RYE GR RE +Q
Sbjct: 65 RDHGDREMGLRPELTSSVARFYINEFKNTPKPVKLYYFTNCFRYENPQAGRYREFWQMGS 124
Query: 196 DIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKVC 255
++IG A+AE+++ I K I + D I VL+ V +++ + ++
Sbjct: 125 ELIGSKKPIADAEVVNMAIEGLKEINM---DFEIHIGHLGVLKGVFEKYNLSDDEGNEIR 181
Query: 256 IIIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIK-----------SLTELEGEAVA 304
+IDK + L + + L+S E + +++ VL +K L + E +VA
Sbjct: 182 RLIDKEDMDGLKSVLSRLESEKNIEIS-KKVFEVLDLKGGKEVIPILKEKLADFES-SVA 239
Query: 305 DLKLLFSLAEKFGYSDWIQFDASVVRGLAYYTGIVFECFDRDGKLRAICGGGRYDQLLST 364
L+ L S+ E + I F + RGL YYTG+VFE + + + +CGGGRYD L+
Sbjct: 240 ALENLDSILEFVPHDYVINF--GIARGLDYYTGMVFEVYGKKEGAKQVCGGGRYDNLIEL 297
Query: 365 FGGDDIPACGFGFG-DAVILELLKEKGLLPPLNHQVEN-----IVCALDHNLQGAASMVA 418
F G+ PA GF +G D ++L + + +VEN + L +A
Sbjct: 298 FEGEPSPAVGFAYGFDRIMLNI---------DDFEVENESIFVVPVKSSEMLLKECLKIA 348
Query: 419 TTLRGKGQSVDLVLESKPLKWVFKRAARINAQRLILVGTTEWQKGMVGVKILSSGEQYEI 478
TLR G+SV++ L + L A N +++++VG + + G V +K + +GEQ I
Sbjct: 349 KTLRDSGKSVEVDLMGRKLNKALNYANTKNIKKVLIVGENDIRDGKVSLKNMETGEQSLI 408
Query: 479 KLDEL 483
+L ++
Sbjct: 409 ELKDI 413
>sp|A6VHK3|SYH_METM7 Histidine--tRNA ligase OS=Methanococcus maripaludis (strain C7 /
ATCC BAA-1331) GN=hisS PE=3 SV=1
Length = 418
Score = 201 bits (510), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 141/425 (33%), Positives = 221/425 (52%), Gaps = 33/425 (7%)
Query: 76 PKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCF 135
PKGTRDF PE+M+ R + ++V + F E++ P ES L +K G+EIR QL+ F
Sbjct: 7 PKGTRDFLPEEMKKRKVIEKKLRKVFDSYNFSEINTPTFESFELLSKKTGDEIRTQLFVF 66
Query: 136 EDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNM 195
+D G+R + LRPELT S+AR I + K+ P+K + C+RYE GR RE +Q
Sbjct: 67 KDHGDREMGLRPELTSSVARFYINEFKNTPKPVKLYYFTNCFRYENPQAGRYREFWQMGS 126
Query: 196 DIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKVC 255
++IG A+AE+I+ I K I + D I VL+ V + + + ++
Sbjct: 127 ELIGSNKPIADAEVINMAIEGLKEINM---DFEINIGHLGVLKGVFEKYDLSDDEGNEIR 183
Query: 256 IIIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIK-----------SLTELEGEAVA 304
+IDK + L N ++S E + E++ VL +K L E E ++A
Sbjct: 184 RLIDKEDMDGLKSALNRIESEKNIEIS-EKVFEVLDLKGGREVISKLKEKLAEFES-SIA 241
Query: 305 DLKLLFSLAEKFGYSDWIQFDASVVRGLAYYTGIVFECFDRDGKLRAICGGGRYDQLLST 364
L+ L S+ E + I F + RGL YYTG+VFE + + R +CGGGRYD L+
Sbjct: 242 ALENLDSILEFVPHEYIINF--GIARGLDYYTGMVFEIYGKREGARQVCGGGRYDNLIEL 299
Query: 365 FGGDDIPACGFGFG-DAVIL-----ELLKEKGLLPPLNHQVENIVCALDHNLQGAASMVA 418
F G+ PA GF +G D ++L E+ +E + P V++ L+ L+ +A
Sbjct: 300 FEGEPSPAVGFAYGFDRIMLNIDDFEVEEESIFVVP----VKSSDMLLNECLK-----IA 350
Query: 419 TTLRGKGQSVDLVLESKPLKWVFKRAARINAQRLILVGTTEWQKGMVGVKILSSGEQYEI 478
TLR G++V+L L + L A +++I+VG + +G V +K + +GEQ I
Sbjct: 351 KTLREAGKAVELDLMGRKLNKALNYANTKGIKKVIIVGENDILEGKVALKNMETGEQSLI 410
Query: 479 KLDEL 483
+L ++
Sbjct: 411 ELKDI 415
>sp|A9A947|SYH_METM6 Histidine--tRNA ligase OS=Methanococcus maripaludis (strain C6 /
ATCC BAA-1332) GN=hisS PE=3 SV=1
Length = 418
Score = 199 bits (506), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 140/425 (32%), Positives = 221/425 (52%), Gaps = 33/425 (7%)
Query: 76 PKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCF 135
PKGTRDF PE+M+ R + ++V + F E++ P ES L +K GEEIR QL+ F
Sbjct: 7 PKGTRDFLPEEMKKRKNIEKKLRKVFDSYNFSEINTPTFESFELLSKKTGEEIRKQLFVF 66
Query: 136 EDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNM 195
+D G+R + LRPELT S+AR I + K+ P+K + C+RYE GR RE +Q
Sbjct: 67 KDHGDREMGLRPELTSSVARFYINEFKNTPKPVKLYYFTNCFRYENPQAGRYREFWQMGS 126
Query: 196 DIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKVC 255
++IG A+AE+I+ I K I + D I VL+ V + + + ++
Sbjct: 127 ELIGSKKPIADAEVINLAIEGLKEINM---DFEINIGHLGVLKGVFEKYDLSDDEGNEIR 183
Query: 256 IIIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIK-----------SLTELEGEAVA 304
+IDK + L + ++S E + E++ VL +K L+E E +V
Sbjct: 184 RLIDKEDMDGLKTALSRIESEKNIEIS-EKVFEVLELKGGREVISKLKEKLSEFES-SVT 241
Query: 305 DLKLLFSLAEKFGYSDWIQFDASVVRGLAYYTGIVFECFDRDGKLRAICGGGRYDQLLST 364
L+ L S+ E + I F + RGL YYTG+VFE + + R +CGGGRYD L+
Sbjct: 242 ALENLDSILEFVPHEYIINF--GIARGLDYYTGMVFEIYGKREGARQVCGGGRYDNLIEL 299
Query: 365 FGGDDIPACGFGFG-DAVIL-----ELLKEKGLLPPLNHQVENIVCALDHNLQGAASMVA 418
F G+ PA GF +G D ++L E+ +E + P V++ L+ L+ +A
Sbjct: 300 FEGEPSPAVGFAYGFDRIMLNIDDFEVEEESIFVVP----VKSSDMLLNECLK-----IA 350
Query: 419 TTLRGKGQSVDLVLESKPLKWVFKRAARINAQRLILVGTTEWQKGMVGVKILSSGEQYEI 478
TLR G++V+L L + L A +++++VG + +G V +K + +GEQ I
Sbjct: 351 KTLRDAGKAVELDLMGRKLNKALNYANTKGIKKVLIVGENDILEGKVALKNMETGEQSLI 410
Query: 479 KLDEL 483
+L ++
Sbjct: 411 ELKDI 415
>sp|A6UQQ6|SYH_METVS Histidine--tRNA ligase OS=Methanococcus vannielii (strain SB / ATCC
35089 / DSM 1224) GN=hisS PE=3 SV=1
Length = 418
Score = 195 bits (496), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 135/428 (31%), Positives = 216/428 (50%), Gaps = 37/428 (8%)
Query: 76 PKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCF 135
PKGTRDF P +M+ R + + + + F E++ P ES L +K GEEIR+QL+ F
Sbjct: 5 PKGTRDFLPVEMKKRKLIEKKLRNIFDSYNFSEINTPTFESFELLSKKTGEEIRNQLFVF 64
Query: 136 EDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNM 195
D GNR + LRPE T S+AR I + K+ P+K + G C+RYE GR RE +Q
Sbjct: 65 NDHGNREMGLRPEFTSSVARFYINEFKNTPKPVKMYYFGNCFRYENPQAGRYREFWQMGA 124
Query: 196 DIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKVC 255
++IG ++AE+++ I K I + D I VL+ V +S+ E +
Sbjct: 125 ELIGSNKSISDAEVLNMAIEGLKSINM---DFEINIGHLGVLKGVFEKYSLSEEDETLIR 181
Query: 256 IIIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIK-----------SLTELEG--EA 302
+IDK + L + ++ E + +++ VL++K LT+ E +A
Sbjct: 182 RLIDKEDTEGLKQVLLKIEEEKNIEIS-KKVFEVLTLKGGKEVISKLKEKLTDFEKSLDA 240
Query: 303 VADLKLLFSLAEKFGYSDWIQFDASVVRGLAYYTGIVFECFDRDGKLRAICGGGRYDQLL 362
+ +L + L D++ + + RGL YYTG+VFE + + R +CGGGRYD L+
Sbjct: 241 LNNLDEILELVP----HDYV-VNFGIARGLDYYTGMVFEIYGKKEGARQVCGGGRYDNLI 295
Query: 363 STFGGDDIPACGFGFG-DAVIL-----ELLKEKGLLPPLNHQVENIVCALDHNLQGAASM 416
F G+ PA GF +G D +IL E+ + + P V+N + L L+
Sbjct: 296 ELFEGEKSPAVGFAYGFDRIILNIDDFEVQDDSIFIIP----VKNDIFLLKECLK----- 346
Query: 417 VATTLRGKGQSVDLVLESKPLKWVFKRAARINAQRLILVGTTEWQKGMVGVKILSSGEQY 476
+A TLR G V++ L + L A N +R+I++G + G + +K + +GEQ
Sbjct: 347 IAKTLRDFGNPVEIDLMGRKLNKALNYANSKNIKRVIIIGENDIFSGKIPLKNMETGEQV 406
Query: 477 EIKLDELE 484
I + +L+
Sbjct: 407 LIDVKDLK 414
>sp|O26346|SYH_METTH Histidine--tRNA ligase OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=hisS PE=3 SV=2
Length = 425
Score = 195 bits (496), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 131/424 (30%), Positives = 213/424 (50%), Gaps = 18/424 (4%)
Query: 71 IDVNPPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRD 130
+D++ P+GTRDF +MR R + + +G+ E+ P+ E LF K+GEE+ +
Sbjct: 1 MDISRPRGTRDFLFAEMRNRKEVEGVLRRTFETYGYHEIKTPIFEELKLFTVKSGEEVVN 60
Query: 131 QLYCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREH 190
Q+Y F D+G R +ALRPELT +ARL + + + P+K + G C+RYER GR R+
Sbjct: 61 QIYHFTDKGGRELALRPELTAPVARLYMNEMQKKPKPIKMYYFGSCFRYERPQAGRFRQF 120
Query: 191 YQWNMDIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHL 250
+Q+ ++IG + AEAE+IS +G+ +V I +L+ +L IP L
Sbjct: 121 WQFGCELIGGRSPLAEAEVISLASESLHELGLDGFEV--HIGHLGILRGILGREEIPSEL 178
Query: 251 FGKVCIIIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLS----IKSLTELEG------ 300
++ +IDK + L+ + +++ +G S + +L+ + + E G
Sbjct: 179 QDRIMGVIDKGDVEELEALLGEVEVSGESRELLMKLIGTQGGPEVLDDVEEYLGGYSESL 238
Query: 301 EAVADLKLLFSLAEKFGYSDWIQFDASVVRGLAYYTGIVFECFDRD-GKLRAICGGGRYD 359
EA+ + + L FG D+ + + RGL YYTGIVFE + + G + ICGGG Y+
Sbjct: 239 EALEEFRELVETLHYFGVDDY-HVNLGIARGLDYYTGIVFEIYVPELGAQKQICGGGTYN 297
Query: 360 QLLSTFGGDDIPACGFGFGDAVILELLKEKGLLPPLNHQVENIVCALDHNLQGAASMVAT 419
L+ TFGG+ + + GF FG ++ L G+ V+ V + + A +
Sbjct: 298 -LVETFGGERVESTGFAFGFDRLMNAL---GMDEENMRMVDVFVIPIQDSTVPEAIRITQ 353
Query: 420 TLRGKGQSVDLVLESKPLKWVFKRAARINAQRLILVGTTEWQKGMVGVKILSSGEQYEIK 479
LR G S DL + + L+ A + A+ +L G E Q G V VK + Q +
Sbjct: 354 ELRAAGVSADLEVSGRKLRKALSHADNLGARFAVLTGEREIQDGKVTVKDMERNSQETLP 413
Query: 480 LDEL 483
DE+
Sbjct: 414 RDEM 417
>sp|B8GDZ3|SYH_METPE Histidine--tRNA ligase OS=Methanosphaerula palustris (strain ATCC
BAA-1556 / DSM 19958 / E1-9c) GN=hisS PE=3 SV=1
Length = 409
Score = 194 bits (492), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 134/420 (31%), Positives = 218/420 (51%), Gaps = 34/420 (8%)
Query: 73 VNPPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQL 132
V P+GTRDF P++M R + +E R +G+ EV P+ E +LF ++G+ I D++
Sbjct: 2 VQRPRGTRDFLPDEMEARRMIEGRMREAVRRWGYREVATPIFEDLSLFTMRSGQGIIDEM 61
Query: 133 YCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQ 192
Y F+D+G R +ALRPELT ++ R+ + + + ++ PL+W C+RYER +GR R+ +Q
Sbjct: 62 YVFQDKGGRDLALRPELTAAVLRMYVNEARVLAKPLRWCYFADCFRYERPQKGRYRQFWQ 121
Query: 193 WNMDIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFG 252
+ +++IG A+AE+I + G+ D +I +++ +L + E +
Sbjct: 122 FGVELIGADTAAADAEVILVADNAIRSSGL---DYDLKIGHLGLMKHLL--ADVGEEVRR 176
Query: 253 KVCIIIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIKSLTEL---------EGEAV 303
KV +DK E D +K+ L++AG++ A + L R+L+ ++L E EG
Sbjct: 177 KVMAYLDKKE---FDGLKDYLETAGLA-ALTDPLTRLLAAETLDEAFAVTGPLPEEGRIR 232
Query: 304 ADLKLLFSLAEKFGYSDWIQFDASVVRGLAYYTGIVFECFDRD-GKLRAICGGGRYDQLL 362
LL + ++ Y + + RGL YYTG+VFE F ++ G I GGG Y +L
Sbjct: 233 EMAALLDATGVRYSY------NFGIARGLDYYTGMVFEGFAKNLGAESQIVGGGAY-RLA 285
Query: 363 STFGGDDIPACGFGFG-DAVILELLKEKGLLPPLNHQVENIVCALDHNLQGAASMVATTL 421
FGGDD P+ GF G D V++ L G + ++ +V + + A VA
Sbjct: 286 QVFGGDDAPSVGFAIGFDRVMVAL----GEVQTRKQKIVGVVSTAEG--RPFAFRVANAF 339
Query: 422 RGKGQSVDLVLESKPLKWVFKRAARINAQRLILVGTTEWQKGMVGVKILSSGEQYEIKLD 481
R G DL L + L RAA+ A +L+G E G V +K L++G Q + +D
Sbjct: 340 RTAGIRADLDLSDRGLGAQLARAAK-EADFAVLIGEREVATGTVTLKNLATGTQTAVTID 398
>sp|A2SQI5|SYH_METLZ Histidine--tRNA ligase OS=Methanocorpusculum labreanum (strain ATCC
43576 / DSM 4855 / Z) GN=hisS PE=3 SV=1
Length = 410
Score = 192 bits (489), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 126/415 (30%), Positives = 212/415 (51%), Gaps = 23/415 (5%)
Query: 73 VNPPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQL 132
+ P+GTRDF P +M R ++ + V+ FG+ E+ P+ E LF K+GE I +++
Sbjct: 2 IQKPRGTRDFLPAEMAQRRFVEQKMRAVAATFGYGEIVTPMFEELELFTIKSGEGIINEM 61
Query: 133 YCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQ 192
Y FED+G R++ LRPE+T ++ R + + + PL+WF +C+RYER +GR R+ +Q
Sbjct: 62 YAFEDKGGRKITLRPEITAAVLRAYVNEAQMAPKPLRWFYFAECFRYERPQKGRYRQFWQ 121
Query: 193 WNMDIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFG 252
+ ++IG + A+AE+IS + G+ ++ ++ +L P
Sbjct: 122 FGSELIGADSAAADAEVISLAYELLRCTGVRFV---MKVGHLAPMKHLLSGLDAPSQ--- 175
Query: 253 KVCIIIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIKSLTELEGEAVADLKLLFSL 312
++ ++K +D++ L S S+ E L +++ K+L E+ D+ +
Sbjct: 176 --KQVMAALDKRDMDLLGTTLASLDSSD-LFEPLKGLVTAKTLPEIFA-VTGDIPEKARI 231
Query: 313 AEKFGY--SDWIQFDAS--VVRGLAYYTGIVFECF-DRDGKLRAICGGGRYDQLLSTFGG 367
E FGY + I F+ + + RGL YYTG+VFE F D G I GGG Y +L FGG
Sbjct: 232 EETFGYLEAQNIPFEQNFGIARGLDYYTGMVFEGFADNLGAENQILGGGVY-RLAHLFGG 290
Query: 368 DDIPACGFGFG-DAVILELLKEKGLLPPLNHQVENIVCALDHNLQGAASMVATTLRGKGQ 426
D+P+CGFG G D V++ L G + P V ++C + + A A+ LR G
Sbjct: 291 KDVPSCGFGIGFDRVLVSL----GEITPQTIPVVAVICTPETRI--PAYNAASALRSAGI 344
Query: 427 SVDLVLESKPLKWVFKRAARINAQRLILVGTTEWQKGMVGVKILSSGEQYEIKLD 481
+ + L + A + A +++G E GM+ +K L++ Q E+ +D
Sbjct: 345 TAVMDLLDRGFGAQLSSALKSGASFAVVIGEKEAAAGMITLKDLATAVQTEMSID 399
>sp|Q11RN9|SYH_CYTH3 Histidine--tRNA ligase OS=Cytophaga hutchinsonii (strain ATCC 33406
/ NCIMB 9469) GN=hisS PE=3 SV=1
Length = 453
Score = 192 bits (487), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 124/445 (27%), Positives = 219/445 (49%), Gaps = 40/445 (8%)
Query: 76 PKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCF 135
PKGTRDF P M R +L +E+ +GF ++ P +E+ ++ K G+E +Y
Sbjct: 7 PKGTRDFGPAQMLKRQYLLQTIREIFTKYGFLPIETPAMENLSVLTGKYGDEGDQLIYKI 66
Query: 136 EDRGN---------------------RRVALRPELTPSLARLVIQKGKSVSLPLKWFAVG 174
+ G+ + ALR +LT AR V+ ++ P K + +
Sbjct: 67 LNSGDFIQGVEQNHLQEGYKKLIPKISKKALRYDLTVPFARHVVMNRNDITFPFKRYQIQ 126
Query: 175 QCWRYERMTRGRRREHYQWNMDIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSR 234
WR +R +GR E Q + D++G ++ EAE++ I F +GIT D +I++R
Sbjct: 127 PVWRADRPQKGRYCEFMQCDADVVGTDSLLCEAEIVLMIHEAFAALGIT--DFVVKINNR 184
Query: 235 KVLQEVLRCHSIPEHLFGKVCIIIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIK- 293
K+L + E ++C+ IDK++K+ + + +LK+ G +++ + LL V +K
Sbjct: 185 KILSGIADAIG-KEGSEAELCVAIDKLDKIGKEAVLEELKTKGFTDSQLTRLLPVFDLKG 243
Query: 294 -------------SLTELEGEAVADLKLLFSLAEKFGYSDW-IQFDASVVRGLAYYTGIV 339
+ + + + + +L+ +F+L EK G + I+ D ++ RGL+YYTG +
Sbjct: 244 NNAEIFPLLRTILAQSSVGLKGIDELEKVFTLIEKSGLGNASIETDLTLARGLSYYTGAI 303
Query: 340 FECFDRDGKLRAICGGGRYDQLLSTFGGDDIPACGFGFGDAVILELLKEKGLLPPL-NHQ 398
FE + ++ ++CGGGRYD L FG ++ G FG I +++ E L P ++
Sbjct: 304 FEVKILNVQMGSVCGGGRYDNLTGVFGLPNVSGVGISFGIDRIYDVMNELNLFPSQESNS 363
Query: 399 VENIVCALDHNLQGAASMVATTLRGKGQSVDLVLESKPLKWVFKRAARINAQRLILVGTT 458
++CA D N A + T LR +G + +L + +K A +L+G
Sbjct: 364 TRLLICAFDENTFMHALPMVTKLRAQGINTELYPDPVKIKKQLSYADDKKIPFALLIGED 423
Query: 459 EWQKGMVGVKILSSGEQYEIKLDEL 483
E +G+ +K L SGEQ+++ DE+
Sbjct: 424 EMNQGLYSLKNLISGEQFKVTFDEV 448
>sp|C3N7K1|SYH_SULIY Histidine--tRNA ligase OS=Sulfolobus islandicus (strain Y.G.57.14 /
Yellowstone #1) GN=hisS PE=3 SV=1
Length = 426
Score = 191 bits (486), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 125/420 (29%), Positives = 232/420 (55%), Gaps = 20/420 (4%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
+G +D+ D +L F++++ +G+ E+ PV+E LF K GEE+R+ +Y F+
Sbjct: 8 RGMKDYIGIDAEKIRYLESTFRDLAIKYGYSEIITPVVEEFKLFALKGGEELRETMYVFK 67
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
D+ +R ++LRPE+TPS+AR IQ +S P++ F G +RY+ GR RE Q ++
Sbjct: 68 DKADRELSLRPEITPSVARAYIQNLQSSPKPIRLFYFGTVYRYDEPQYGRYREFRQAGIE 127
Query: 197 IIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKVCI 256
+IG ++ A+ E++ + F+ ++ + ++D+ +I++ + ++++ ++I ++L +
Sbjct: 128 MIGDSSILADLEVLDLLYNFYDKLNL-SNDITIKINNIGIFRKIMDKYNIEDNLQEHILH 186
Query: 257 IIDKIE-KLPLDVIKNDLKSAGM----SEAAIEELLRVLSIKSLTELEGEAVADLK---- 307
+IDK + LD+++ +LK+ + ++ ++ ++ I+SL ELE + D+K
Sbjct: 187 LIDKNKINEALDILEKNLKNKDIIDFFNKILTKKDTKLEDIESLAELEEVSRLDIKSEFL 246
Query: 308 LLFSLAEKFGYSDW-IQF--DASVVRGLAYYTGIVFECFDRDGKLRAICGGGRYDQLLST 364
LF L+ SD I+F D VRGLAYYTG++FE + +I GGGRYD+L+
Sbjct: 247 YLFRLSRIL--SDLNIKFKIDLGFVRGLAYYTGLIFEVLHPSVQF-SIAGGGRYDKLIEL 303
Query: 365 FGGDDIPACGFGFGDAVILELLKEKGLLPPLNHQVENIVCALDHNLQGAASMVATTLRGK 424
+GG PA GF G L ++K+ + P+N IV + + + MV+ LR +
Sbjct: 304 YGGLPSPAIGFAIGVERTLLVIKDLKVEEPVNV----IVIGMSEDTIPSMFMVSRILRKE 359
Query: 425 GQSVDLVLESKPLKWVFKRAARINAQRLILVGTTEWQKGMVGVKILSSGEQYEIKLDELE 484
V + + +PL + A + I++G E +K M+ V+ L + +Q + L+ +E
Sbjct: 360 EYKVVINTKDQPLSKLLPYYASQGFKVAIIIGKQELEKNMITVRNLITRKQISVPLENIE 419
>sp|C3MY40|SYH_SULIM Histidine--tRNA ligase OS=Sulfolobus islandicus (strain M.14.25 /
Kamchatka #1) GN=hisS PE=3 SV=1
Length = 426
Score = 191 bits (485), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 121/418 (28%), Positives = 229/418 (54%), Gaps = 16/418 (3%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
+G +D+ D +L F++++ +G+ E+ PV+E LF K GEE+R+ +Y F+
Sbjct: 8 RGMKDYIGIDAEKIRYLESTFRDLAIKYGYSEIITPVVEEFKLFALKGGEELRETMYVFK 67
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
D+ +R ++LRPE+TPS+AR IQ +S P++ F G +RY+ GR RE Q ++
Sbjct: 68 DKADRELSLRPEITPSVARAYIQNLQSSPKPIRLFYFGTVYRYDEPQYGRYREFRQAGIE 127
Query: 197 IIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKVCI 256
+IG ++ A+ E++ + F+ ++ + ++D+ +I++ + ++++ ++I ++L +
Sbjct: 128 MIGDSSILADLEVLDLLYNFYDKLNL-SNDITIKINNIGIFRKIMDKYNIEDNLQEHILH 186
Query: 257 IIDKIE-KLPLDVIKNDLKSAGM----SEAAIEELLRVLSIKSLTELEGEAVADLK---- 307
+IDK + LD+++ +LK+ + ++ ++ ++ I+SL ELE + D+K
Sbjct: 187 LIDKNKINEALDILEKNLKNKDIIDFFNKILTKKDTKLEDIESLAELEEVSRLDIKSEFL 246
Query: 308 LLFSLAEKFGYSDW-IQFDASVVRGLAYYTGIVFECFDRDGKLRAICGGGRYDQLLSTFG 366
LF L+ + + D VRGLAYYTG++FE + +I GGGRYD+L+ +G
Sbjct: 247 YLFRLSRILSNLNIKFKIDLGFVRGLAYYTGLIFEVLHPSVQF-SIAGGGRYDKLIELYG 305
Query: 367 GDDIPACGFGFGDAVILELLKEKGLLPPLNHQVENIVCALDHNLQGAASMVATTLRGKGQ 426
G PA GF G L ++K+ + P+N IV + + + MV+ LR +
Sbjct: 306 GLPSPAIGFAIGVERTLLVIKDLKVEEPVNV----IVIGMSEDTIPSMFMVSRILRKEEY 361
Query: 427 SVDLVLESKPLKWVFKRAARINAQRLILVGTTEWQKGMVGVKILSSGEQYEIKLDELE 484
V + + +PL + A + I++G E +K M+ V+ L + +Q + L+ +E
Sbjct: 362 KVVINTKDQPLSKLLPYYASQGFKVAIIIGKQELEKNMITVRNLITRKQISVPLENIE 419
>sp|C3MRE4|SYH_SULIL Histidine--tRNA ligase OS=Sulfolobus islandicus (strain L.S.2.15 /
Lassen #1) GN=hisS PE=3 SV=1
Length = 426
Score = 191 bits (485), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 121/418 (28%), Positives = 229/418 (54%), Gaps = 16/418 (3%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
+G +D+ D +L F++++ +G+ E+ PV+E LF K GEE+R+ +Y F+
Sbjct: 8 RGMKDYIGIDAEKIRYLESTFRDLAIKYGYSEIITPVVEEFKLFALKGGEELRETMYVFK 67
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
D+ +R ++LRPE+TPS+AR IQ +S P++ F G +RY+ GR RE Q ++
Sbjct: 68 DKADRELSLRPEITPSVARAYIQNLQSSPKPIRLFYFGTVYRYDEPQYGRYREFRQAGIE 127
Query: 197 IIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKVCI 256
+IG ++ A+ E++ + F+ ++ + ++D+ +I++ + ++++ ++I ++L +
Sbjct: 128 MIGDSSILADLEVLDLLYNFYDKLNL-SNDITIKINNIGIFRKIMDKYNIEDNLQEHILH 186
Query: 257 IIDKIE-KLPLDVIKNDLKSAGM----SEAAIEELLRVLSIKSLTELEGEAVADLK---- 307
+IDK + LD+++ +LK+ + ++ ++ ++ I+SL ELE + D+K
Sbjct: 187 LIDKNKINEALDILEKNLKNKDIIDFFNKILTKKDTKLEDIESLAELEEVSRLDIKSEFL 246
Query: 308 LLFSLAEKFGYSDW-IQFDASVVRGLAYYTGIVFECFDRDGKLRAICGGGRYDQLLSTFG 366
LF L+ + + D VRGLAYYTG++FE + +I GGGRYD+L+ +G
Sbjct: 247 YLFRLSRILSNLNIKFKIDLGFVRGLAYYTGLIFEVLHPSVQF-SIAGGGRYDKLIELYG 305
Query: 367 GDDIPACGFGFGDAVILELLKEKGLLPPLNHQVENIVCALDHNLQGAASMVATTLRGKGQ 426
G PA GF G L ++K+ + P+N IV + + + MV+ LR +
Sbjct: 306 GLPSPAIGFAIGVERTLLVIKDLKVEEPVNV----IVIGMSEDTIPSMFMVSRILRKEEY 361
Query: 427 SVDLVLESKPLKWVFKRAARINAQRLILVGTTEWQKGMVGVKILSSGEQYEIKLDELE 484
V + + +PL + A + I++G E +K M+ V+ L + +Q + L+ +E
Sbjct: 362 KVVINTKDQPLSKLLPYYASQGFKVAIIIGKQELEKNMITVRNLITRKQISVPLENIE 419
>sp|C4KIQ9|SYH_SULIK Histidine--tRNA ligase OS=Sulfolobus islandicus (strain M.16.4 /
Kamchatka #3) GN=hisS PE=3 SV=1
Length = 426
Score = 191 bits (485), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 121/418 (28%), Positives = 229/418 (54%), Gaps = 16/418 (3%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
+G +D+ D +L F++++ +G+ E+ PV+E LF K GEE+R+ +Y F+
Sbjct: 8 RGMKDYIGIDAEKIRYLESTFRDLAIKYGYSEIITPVVEEFKLFALKGGEELRETMYVFK 67
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
D+ +R ++LRPE+TPS+AR IQ +S P++ F G +RY+ GR RE Q ++
Sbjct: 68 DKADRELSLRPEITPSVARAYIQNLQSSPKPIRLFYFGTVYRYDEPQYGRYREFRQAGIE 127
Query: 197 IIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKVCI 256
+IG ++ A+ E++ + F+ ++ + ++D+ +I++ + ++++ ++I ++L +
Sbjct: 128 MIGDSSILADLEVLDLLYNFYDKLNL-SNDITIKINNIGIFRKIMDKYNIEDNLQEHILH 186
Query: 257 IIDKIE-KLPLDVIKNDLKSAGM----SEAAIEELLRVLSIKSLTELEGEAVADLK---- 307
+IDK + LD+++ +LK+ + ++ ++ ++ I+SL ELE + D+K
Sbjct: 187 LIDKNKINEALDILEKNLKNKDIIDFFNKILTKKDTKLEDIESLAELEEVSRLDIKSEFL 246
Query: 308 LLFSLAEKFGYSDW-IQFDASVVRGLAYYTGIVFECFDRDGKLRAICGGGRYDQLLSTFG 366
LF L+ + + D VRGLAYYTG++FE + +I GGGRYD+L+ +G
Sbjct: 247 YLFRLSRILSNLNIKFKIDLGFVRGLAYYTGLIFEVLHPSVQF-SIAGGGRYDKLIELYG 305
Query: 367 GDDIPACGFGFGDAVILELLKEKGLLPPLNHQVENIVCALDHNLQGAASMVATTLRGKGQ 426
G PA GF G L ++K+ + P+N IV + + + MV+ LR +
Sbjct: 306 GLPSPAIGFAIGVERTLLVIKDLKVEEPVNV----IVIGMSEDTIPSMFMVSRILRKEEY 361
Query: 427 SVDLVLESKPLKWVFKRAARINAQRLILVGTTEWQKGMVGVKILSSGEQYEIKLDELE 484
V + + +PL + A + I++G E +K M+ V+ L + +Q + L+ +E
Sbjct: 362 KVVINTKDQPLSKLLPYYASQGFKVAIIIGKQELEKNMITVRNLITRKQISVPLENIE 419
>sp|C3NFX3|SYH_SULIN Histidine--tRNA ligase OS=Sulfolobus islandicus (strain Y.N.15.51 /
Yellowstone #2) GN=hisS PE=3 SV=1
Length = 426
Score = 191 bits (485), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 127/424 (29%), Positives = 232/424 (54%), Gaps = 28/424 (6%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
+G +D+ D +L F++++ +G+ E+ PV+E LF K GEE+R+ +Y F+
Sbjct: 8 RGMKDYIGIDAEKIRYLESTFRDLAIKYGYSEIITPVVEEFKLFALKGGEELRETMYVFK 67
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
D+ +R ++LRPE+TPS+AR IQ +S P++ F G +RY+ GR RE Q ++
Sbjct: 68 DKADRELSLRPEITPSVARAYIQNLQSSPKPIRLFYFGTVYRYDEPQYGRYREFRQAGIE 127
Query: 197 IIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKVCI 256
+IG ++ A+ E++ + F+ ++ + ++D+ +I++ + ++++ ++I ++L +
Sbjct: 128 MIGDSSILADLEVLDLLYNFYDKLNL-SNDITIKINNIGIFRKIMDKYNIEDNLQEHILH 186
Query: 257 IIDKIE-KLPLDVIKNDLKSAGMSEAAIEELLRVLS--------IKSLTELEGEAVADLK 307
+IDK + LD+++ +LK+ + I+ ++L+ I+SL ELE + D+K
Sbjct: 187 LIDKNKINEALDILEKNLKNKDI----IDFFYKILTKKDTKLEDIESLAELEEVSRLDIK 242
Query: 308 ----LLFSLAEKFGYSDW-IQF--DASVVRGLAYYTGIVFECFDRDGKLRAICGGGRYDQ 360
LF L+ SD I+F D VRGLAYYTG++FE + +I GGGRYD+
Sbjct: 243 SEFLYLFRLSRIL--SDLNIKFKIDLGFVRGLAYYTGLIFEVLHPSVQF-SIAGGGRYDK 299
Query: 361 LLSTFGGDDIPACGFGFGDAVILELLKEKGLLPPLNHQVENIVCALDHNLQGAASMVATT 420
L+ +GG PA GF G L ++K+ + P+N IV + + + MV+
Sbjct: 300 LIELYGGLPSPAIGFAIGVERTLLVIKDLKVEEPVNV----IVIGMSEDTIPSMFMVSRI 355
Query: 421 LRGKGQSVDLVLESKPLKWVFKRAARINAQRLILVGTTEWQKGMVGVKILSSGEQYEIKL 480
LR + V + + +PL + A + I++G E +K M+ V+ L + +Q + L
Sbjct: 356 LRKEEYKVVINTKDQPLSKLLPYYASQGFKVAIIIGKQELEKNMITVRNLITRKQISVPL 415
Query: 481 DELE 484
+ +E
Sbjct: 416 ENIE 419
>sp|Q8TS62|SYH_METAC Histidine--tRNA ligase OS=Methanosarcina acetivorans (strain ATCC
35395 / DSM 2834 / JCM 12185 / C2A) GN=hisS PE=3 SV=1
Length = 413
Score = 191 bits (485), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 135/420 (32%), Positives = 213/420 (50%), Gaps = 23/420 (5%)
Query: 71 IDVNPPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRD 130
+ VN P+GTRDF P D R ++ + V R +G+ E+ P E LF K+GE I
Sbjct: 1 MTVNRPRGTRDFLPADTARRRYVESVMRNVVRNWGYSEIITPTFEHLDLFTLKSGEGIVG 60
Query: 131 QLYCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREH 190
+LY F D+G R + LRPELT + RL + + + PLK F C+RYER +GR RE
Sbjct: 61 ELYNFTDKGGRDMTLRPELTAPVMRLYVNELQPFPKPLKLFYFENCFRYERPQKGRFREF 120
Query: 191 YQWNMDIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHL 250
+Q+ +++IG ++AE+I+ K +GI ++ + V++ +L+ + +
Sbjct: 121 WQFGVELIGSGKSDSDAEVIALADALLKAVGIQGD---MKLGNLAVIRTLLK--GLEPEI 175
Query: 251 FGKVCIIIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSI--KSLTELEGEAVADLKL 308
KV ++DK E L+ + L+ G E +L ++ + K + E V ++
Sbjct: 176 VSKVMRLVDKKEYAGLESL---LEEIGAEEQLKSDLFHLIHLEGKYILPKVKEIVGNIPE 232
Query: 309 LFSLAEKFGYSDWIQFDAS----VVRGLAYYTGIVFECFDRD-GKLRAICGGGRYDQLLS 363
L + D D S + RGL YYTG+VFE + G + +CGGG Y QL+
Sbjct: 233 LVGFEKTLKLLDAYGVDYSLDFGIARGLDYYTGMVFEVYAEGLGAQKQVCGGGSY-QLIQ 291
Query: 364 TFGGDDIPACGFGFGDAVILELLKEKGLLPPLNHQVENIVCALDHNLQGAASMVATTLRG 423
FGG D+P+ GFG G I+E+ L+PP + +N+V A VA+ LR
Sbjct: 292 LFGGGDVPSTGFGIGFDRIMEICP---LVPPAS---KNLVLVSKPATHIEAVKVASELRN 345
Query: 424 KGQSVDLVLESKPLKWVFKRAARINAQRLILVGTTEWQKGMVGVKILSSGEQYEIKLDEL 483
V + L + K F A INA +++VG E + G + ++ + SGEQ + L+E+
Sbjct: 346 Y-LPVQIDLMERNFKAQFSYANTINADYVVIVGEKELEAGKLTLRDMVSGEQELLTLEEI 404
>sp|Q8PVB0|SYH_METMA Histidine--tRNA ligase OS=Methanosarcina mazei (strain ATCC BAA-159
/ DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) GN=hisS
PE=3 SV=1
Length = 411
Score = 190 bits (483), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 136/421 (32%), Positives = 217/421 (51%), Gaps = 25/421 (5%)
Query: 71 IDVNPPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRD 130
+ VN P+GTRDF P D R ++ + V +G+ E+ P E LF K+GE I
Sbjct: 1 MSVNRPRGTRDFLPADTARRRYVESVMRNVVLNWGYSEIITPTFEHLDLFTLKSGEGIIG 60
Query: 131 QLYCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREH 190
+LY F D+G R + LRPELT + R + + + PLK F C+RYER +GR RE
Sbjct: 61 ELYNFTDKGGREMTLRPELTAPVMRFYVNELQPFPKPLKLFYFENCFRYERPQKGRFREF 120
Query: 191 YQWNMDIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHL 250
+Q+ +++IG ++AE+I+ K +GI ++ + V++ +L+ + +
Sbjct: 121 WQFGVELIGSGKSDSDAEVIALASALLKAVGIKGD---MKLGNLAVIRTLLK--GLEPEI 175
Query: 251 FGKVCIIIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIKS---LTELEGEAVADLK 307
V ++DK E L+ + +++ G E +L R++ ++ L E++G V ++
Sbjct: 176 VSNVMRLVDKKEYAGLEALLDEI---GAEEQLKSDLFRLIHLQGRYILPEVKG-IVGNIP 231
Query: 308 LLFSLAEKFGYSDWIQFDAS----VVRGLAYYTGIVFECFDRD-GKLRAICGGGRYDQLL 362
L S + D D S + RGL YYTG+VFE + G + +CGGG Y QL+
Sbjct: 232 ELVSFEKTLKLLDAYGVDYSLDFGIARGLDYYTGMVFEVYAEGLGAQKQVCGGGSY-QLI 290
Query: 363 STFGGDDIPACGFGFGDAVILELLKEKGLLPPLNHQVENIVCALDHNLQGAASMVATTLR 422
FGG D+P+ GFG G I+E+ L+PP + +V D +L+ A VAT LR
Sbjct: 291 QLFGGGDVPSTGFGIGFDRIMEICP---LVPPAQKSL-VVVSKPDTHLE--AVKVATELR 344
Query: 423 GKGQSVDLVLESKPLKWVFKRAARINAQRLILVGTTEWQKGMVGVKILSSGEQYEIKLDE 482
V + L + K A INA +I+VG E + G + ++ + SGEQ + L+E
Sbjct: 345 NY-LPVQIDLMERNFKAQLSYANTINADYVIIVGEKELEAGKLTLRDMVSGEQELLTLEE 403
Query: 483 L 483
+
Sbjct: 404 I 404
>sp|A1RUZ2|SYH_PYRIL Histidine--tRNA ligase OS=Pyrobaculum islandicum (strain DSM 4184 /
JCM 9189) GN=hisS PE=3 SV=1
Length = 421
Score = 190 bits (482), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 130/423 (30%), Positives = 220/423 (52%), Gaps = 28/423 (6%)
Query: 74 NPPKGTRDF-PPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQL 132
PP+G RD+ PP+ LR+ + +V+ FG+ V+ PV+E + +KAG+E+ +++
Sbjct: 10 RPPRGMRDWLPPQFYALRH-MEETLSKVAEAFGYRRVETPVVEHFEVLAKKAGQEVVNEI 68
Query: 133 YCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQ 192
Y F+D+ R + LR ++T +AR VI S+ P++W+ + +RY+ GR RE YQ
Sbjct: 69 YYFKDKAGRDLGLRFDMTVPIAR-VISYNLSLPRPIRWYYFTKVFRYDEPQHGRYREFYQ 127
Query: 193 WNMDIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFG 252
+ +++IG + A+AE++ +G + V +I+ R+V+ ++L + +
Sbjct: 128 FGIELIGSASPRADAEVLQVFTQALDAVGARSYIV--KINDRRVVDKLLERLGVSAYR-D 184
Query: 253 KVCIIIDKIEKLPLDVIKNDLKSAGMS------------EAAIEELLRVLSIKSLTELEG 300
+ +DK KL + + + G+S E +IEE ++ +T+L+
Sbjct: 185 VIYRALDKKLKLSREEVIKLMAEGGVSLDTAERIYDIAEEMSIEE-----AVNVITKLDS 239
Query: 301 EAVADLKLLFSLAEKFGYSDWIQFDASVVRGLAYYTGIVFECFDRDGKLRAICGGGRYDQ 360
+ L E D +FD S+VRGL YYTG+VFE F + KL A+ GGGRYD
Sbjct: 240 GLGSFYNKLLKYLEAAVSLDKFRFDMSIVRGLDYYTGMVFEAFAGEYKL-AVGGGGRYDD 298
Query: 361 LLSTFGGDDIPACGFGFGDAVILELLKEKGLLPPLNHQVENIVCALDHNLQGAASMVATT 420
LL + G +PA GF G ++E + +G+ PL++ + D + A +A
Sbjct: 299 LLELYSGVKMPALGFAIGVERLMEAVGLEGVEKPLDYY----IYIFDDDAYPYAVAIAKR 354
Query: 421 LRGKGQSVDLVLESKPLKWVFKRAARINAQRLILVGTTEWQKGMVGVKILSSGEQYEIKL 480
LR G SV + L K LK VF+ +I + LI++G E +KG+V ++ L E++E
Sbjct: 355 LRSAGYSVVVELGEKNLKEVFEYILKIGTRYLIIIGKKELEKGVVKIRDLQRREEFEKPF 414
Query: 481 DEL 483
E
Sbjct: 415 SEF 417
>sp|A6UT01|SYH_META3 Histidine--tRNA ligase OS=Methanococcus aeolicus (strain Nankai-3 /
ATCC BAA-1280) GN=hisS PE=3 SV=1
Length = 418
Score = 189 bits (481), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 133/434 (30%), Positives = 213/434 (49%), Gaps = 45/434 (10%)
Query: 74 NPPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLY 133
N PKGTRDF P +M+ R + + + V + F E++ P E L +K GE+IR QL+
Sbjct: 3 NRPKGTRDFAPSEMKKRKIIENKLKSVFMAYNFNEINTPTFEYFELLSKKTGEDIRKQLF 62
Query: 134 CFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQW 193
F+D GNR + LRPE+T S+ R I + K++ P K F C+RYE+ GR RE +Q
Sbjct: 63 VFKDHGNREMGLRPEITSSVVRFYINELKNLPKPQKLFYFANCFRYEQPQAGRYREFWQM 122
Query: 194 NMDIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGK 253
+++G A+AE+I+ + +I + D I VL+ V + E K
Sbjct: 123 GCELLGSKNPIADAEVINLAMDGLNKINM---DYEIHIGHLGVLKGVFEEFGLTEDEELK 179
Query: 254 VCIIIDK-----IEKLPLDVIKND-----------LKSAGMSEAAIEELLRVLSI--KSL 295
+ +IDK +EK +++ +N L S G E I L +L KS+
Sbjct: 180 IRRLIDKEDYENLEKCLIELEENKNIIIKDIIFSVLNSKGTVEEVIGNLKEILKNYPKSI 239
Query: 296 TELEGEAVADLKLLFSLAEKFGYSDWIQFDASVVRGLAYYTGIVFECFDRDGKLRAICGG 355
EA+ +L+ + ++ Y + + RGL YYTG+VFE + + R +CGG
Sbjct: 240 -----EALNNLEEIMEFVKRNNYI----INLGIARGLDYYTGMVFEVYGKKEGARQVCGG 290
Query: 356 GRYDQLLSTFGGDDIPACGFGFG-DAVIL-----ELLKEKGLLPPLNHQVENIVCALDHN 409
GRYD L+ F G PA GF +G D ++L E+ ++ L+ P+ D
Sbjct: 291 GRYDNLIELFEGAPTPAVGFAYGFDRIMLNIDDFEVEDKRILIVPIKK---------DKK 341
Query: 410 LQGAASMVATTLRGKGQSVDLVLESKPLKWVFKRAARINAQRLILVGTTEWQKGMVGVKI 469
L ++A LR + V++ L ++ L A + ++I++G E + + +K
Sbjct: 342 LLKECLIIADKLREMEKIVEVDLMNRKLNKALNYANTVGISKVIMIGEKELNERKISIKD 401
Query: 470 LSSGEQYEIKLDEL 483
+ +GEQ I L+EL
Sbjct: 402 METGEQKLIDLEEL 415
>sp|A4YJ03|SYH_METS5 Histidine--tRNA ligase OS=Metallosphaera sedula (strain ATCC 51363
/ DSM 5348) GN=hisS PE=3 SV=1
Length = 430
Score = 187 bits (475), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 130/427 (30%), Positives = 214/427 (50%), Gaps = 21/427 (4%)
Query: 71 IDVNPPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRD 130
+ P +G D+ D ++ W+ NF+E G++E P++E LF K GEE+R+
Sbjct: 2 VSYEPMRGMEDYFDVDSKIIRWIESNFRETVEKAGYKEAMTPIVEDFELFSLKGGEELRN 61
Query: 131 QLYCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREH 190
+Y F+D+G R VALRPE+TPS+ RL + + PL+ F +G+ +RY+ +GR RE
Sbjct: 62 TMYVFKDKGEREVALRPEITPSIVRLYLNSLQHYPKPLRIFYIGRVYRYDEPQQGRYREF 121
Query: 191 YQWNMDIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHL 250
Q ++++G ++ A+ E++ + F++RI + + +I++ + + + S E +
Sbjct: 122 RQAGVELLGSDSILADIEVLHLLENFYRRINL-KDKISLKINNIGIFRIIFNKLSFDEQV 180
Query: 251 FGKVCIIIDK-----IEKLPLDVIKNDLK---------SAGMSEAAIEELLRVLSIKSLT 296
+ ++DK EK+ + I+++ K + G S +EE +R L+
Sbjct: 181 QEHLLHLLDKGKIEEAEKILDEKIRDNSKIRQFIYTLITNGRS-LKLEEAMREAEKTELS 239
Query: 297 ELEGEAVADLKLLFSLAEKFGYSDWIQFDASVVRGLAYYTGIVFECFDRDGKLRAICGGG 356
EL E + +LKL+ + + D VRGLAYYTG +FE RD +I GGG
Sbjct: 240 ELVNE-IENLKLISEILSSLNLDHIV--DLGFVRGLAYYTGPIFEVVKRDLPF-SIAGGG 295
Query: 357 RYDQLLSTFGGDDIPACGFGFGDAVILELLKEKGLLPPLNHQVENIVCALDHNLQGAASM 416
RYD L+ +GG+ PA GF G + L + G+ N + +V ALD ++ A
Sbjct: 296 RYDSLVEVYGGNRTPAVGFAIGIERTMYALNKDGIKFDSNAPLVAVV-ALDRSVIPHALS 354
Query: 417 VATTLRGKGQSVDLVLESKPLKWVFKRAARINAQRLILVGTTEWQKGMVGVKILSSGEQY 476
+ + LR KG L + PL + A LI++G E G V V+ L EQ
Sbjct: 355 IVSMLRDKGFITVLNNKEIPLSKLVPLYAEQGFTHLIIMGQKEITSGKVTVRNLVKREQI 414
Query: 477 EIKLDEL 483
+ EL
Sbjct: 415 TTDVKEL 421
>sp|A6LIF7|SYH_PARD8 Histidine--tRNA ligase OS=Parabacteroides distasonis (strain ATCC
8503 / DSM 20701 / NCTC 11152) GN=hisS PE=3 SV=1
Length = 451
Score = 187 bits (475), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 125/445 (28%), Positives = 212/445 (47%), Gaps = 41/445 (9%)
Query: 76 PKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLY-- 133
PKGTRDF PE+M RN++F+ +EV L+GF++++ P +E+ + + K GEE L+
Sbjct: 7 PKGTRDFSPEEMAKRNYIFNTIREVFHLYGFQQIETPAMENLSTLMGKYGEEGDKLLFKI 66
Query: 134 -----CFEDRGNRRV---------------ALRPELTPSLARLVIQKGKSVSLPLKWFAV 173
CF + + LR +LT AR V+Q +S P K + +
Sbjct: 67 LNSGDCFAGISDEELMEKNPLRFAAKACEKGLRYDLTVPFARYVVQHRNEISFPFKRYQI 126
Query: 174 GQCWRYERMTRGRRREHYQWNMDIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISS 233
WR +R +GR RE YQ + D++G ++ E ELI + F R GI V ++++
Sbjct: 127 QPVWRADRPQKGRYREFYQCDGDVVGSDSLINEVELIQIMDEVFHRFGIR---VCIKMNN 183
Query: 234 RKVLQEVLRCHSIPEHLFGKVCIIIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIK 293
RK+L + + + + + IDK++K+ LD + +L+S G+ E AIE L ++ ++
Sbjct: 184 RKILSGIAEIIGEADKIV-DITVAIDKLDKIGLDNVNEELRSKGLPEEAIERLQPIIMLQ 242
Query: 294 --------------SLTELEGEAVADLKLLFSLAEKFGYSDWIQFDASVVRGLAYYTGIV 339
S +E + VA+L + ++ D ++ RGL YYTG +
Sbjct: 243 GSNQEKIATLKKVLSASETGLKGVAELDFILERISHTSIRAELELDLTLARGLNYYTGAI 302
Query: 340 FECFDRDGKLRAICGGGRYDQLLSTFGGDDIPACGFGFGDAVILELLKEKGLLPPLNHQV 399
FE D ++ +I GGGRYD L FG + + GF FG I ++L + L P + +
Sbjct: 303 FEVKALDVQIGSITGGGRYDNLTGVFGMEGVSGVGFSFGADRIFDVLNQLDLYPEGSLKT 362
Query: 400 ENIV-CALDHNLQGAASMVATTLRGKGQSVDLVLESKPLKWVFKRAARINAQRLILVGTT 458
++ + + +R G +L ES +K A + +VG
Sbjct: 363 TQLLFVNFGQKEEIHLLPLIAKVRKAGIRTELYPESTKMKKQMGYADAKKIPFVAIVGEN 422
Query: 459 EWQKGMVGVKILSSGEQYEIKLDEL 483
E + + +K + +GEQ + ++EL
Sbjct: 423 EMAENKINLKNMLTGEQTLVTIEEL 447
>sp|B1YCS2|SYH_PYRNV Histidine--tRNA ligase OS=Pyrobaculum neutrophilum (strain DSM 2338
/ JCM 9278 / V24Sta) GN=hisS PE=3 SV=1
Length = 417
Score = 186 bits (473), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 129/421 (30%), Positives = 219/421 (52%), Gaps = 24/421 (5%)
Query: 74 NPPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLY 133
PP+G RD+ P + + +V+ FG+ V+ PV+E + +KAG+E+ +++Y
Sbjct: 10 RPPRGMRDWLPPQLYALIEMEERLSKVAESFGYRRVETPVVEHFEVLAKKAGQEVVNEIY 69
Query: 134 CFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQW 193
F+D+ R V LR ++T +AR VI + P++W+ + +RY+ GR RE +Q+
Sbjct: 70 YFKDKAGRDVGLRFDMTVPVAR-VISYNLDLPRPVRWYYFTKVFRYDEPQHGRYREFHQF 128
Query: 194 NMDIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGK 253
++++G + A+AE+I I + G A D +I+ R+ + ++L + +H
Sbjct: 129 GIELVGSASPRADAEVIQVFIEALEAAG--ARDYVVKINDRRAVDKLLESLGVLQHR-DV 185
Query: 254 VCIIIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIKSLTELEGEAVADLKL---LF 310
+ +DK KLP + + + + + G+ I++ R+ LE A L+L L
Sbjct: 186 IYRALDKKYKLPREQVVDIMTNGGVP---IDKAERIYDASEEMTLEEAVDAVLRLDAGLG 242
Query: 311 SLAEKF-GY------SDWIQFDASVVRGLAYYTGIVFECFDRDGKLR-AICGGGRYDQLL 362
S +K GY D ++FD S+VRGL YYTG+VFE + GK R A+ GGGRYD LL
Sbjct: 243 SFYQKLVGYLATAVPVDRLRFDMSIVRGLDYYTGVVFEAY--VGKYRLAVGGGGRYDDLL 300
Query: 363 STFGGDDIPACGFGFGDAVILELLKEKGLLPPLNHQVENIVCALDHNLQGAASMVATTLR 422
+ G +PA GF G ++E + + + PL++ + D A +A LR
Sbjct: 301 ELYSGVKMPALGFAIGVERLMEAVGLERVEKPLDY----YIYIFDDGAYPHAVALAKKLR 356
Query: 423 GKGQSVDLVLESKPLKWVFKRAARINAQRLILVGTTEWQKGMVGVKILSSGEQYEIKLDE 482
G SV + L K LK F+ ++ + LI++G E ++G+V ++ L E++E L E
Sbjct: 357 AAGHSVAIELGEKNLKDAFEYILKVGTKYLIIMGRRELERGVVKIRDLQRREEFEKPLAE 416
Query: 483 L 483
Sbjct: 417 F 417
>sp|Q64QS2|SYH_BACFR Histidine--tRNA ligase OS=Bacteroides fragilis (strain YCH46)
GN=hisS PE=3 SV=1
Length = 454
Score = 186 bits (471), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 125/445 (28%), Positives = 213/445 (47%), Gaps = 41/445 (9%)
Query: 76 PKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCF 135
PKGTRDF P +M RN++F+ ++V L+GF++++ P +E + + K GEE L+
Sbjct: 8 PKGTRDFSPVEMAKRNYIFNTIRDVYHLYGFQQIETPSMEMLSTLMGKYGEEGDKLLFKI 67
Query: 136 EDRGN------------RRVA----------LRPELTPSLARLVIQKGKSVSLPLKWFAV 173
++ G+ R A LR +LT AR V+ ++ P K + +
Sbjct: 68 QNSGDYFSGITDEELLSRNAAKLASKFCEKGLRYDLTVPFARYVVMHRDEITFPFKRYQI 127
Query: 174 GQCWRYERMTRGRRREHYQWNMDIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISS 233
WR +R +GR RE YQ + D++G ++ E EL+ + T F R GI V +I++
Sbjct: 128 QPVWRADRPQKGRYREFYQCDADVVGSDSLLNEVELMQIVDTVFTRFGIR---VCIKINN 184
Query: 234 RKVLQEVLRCHSIPEHLFGKVCIIIDKIEKLPLDVIKNDLKSAGMSEAAI---------- 283
RK+L + + + + + IDK++K+ LD + +L G+SE AI
Sbjct: 185 RKILTGIAEIIGEADKIV-DITVAIDKLDKIGLDNVNKELAEKGISEEAIAKLQPIILLS 243
Query: 284 ----EELLRVLSIKSLTELEGEAVADLKLLFSLAEKFGYSDWIQFDASVVRGLAYYTGIV 339
E+L + ++ S +E + V + + + + + G + I+ D ++ RGL YYTG +
Sbjct: 244 GTNTEKLATLKTVLSDSETGLKGVEESEFILNTLQTMGLKNEIELDLTLARGLNYYTGAI 303
Query: 340 FECFDRDGKLRAICGGGRYDQLLSTFGGDDIPACGFGFGDAVILELLKEKGLLPPLNHQV 399
FE D ++ +I GGGRYD L FG + G FG I ++L + L P
Sbjct: 304 FEVKALDVQIGSITGGGRYDNLTGVFGMAGVSGVGISFGADRIFDVLNQLELYPKEAVNG 363
Query: 400 ENIVCALDHNLQGAASM-VATTLRGKGQSVDLVLESKPLKWVFKRAARINAQRLILVGTT 458
++ + A SM + + R G ++ ++ +K A N + +VG
Sbjct: 364 TQLLFINFGEKEAAFSMGILSKARAAGIRAEIFPDAAKMKKQMSYANVKNIPFVAIVGEN 423
Query: 459 EWQKGMVGVKILSSGEQYEIKLDEL 483
E +G +K + SGEQ + +EL
Sbjct: 424 EMNEGKAMLKNMESGEQQLVTAEEL 448
>sp|A4WIN2|SYH_PYRAR Histidine--tRNA ligase OS=Pyrobaculum arsenaticum (strain DSM 13514
/ JCM 11321) GN=hisS PE=3 SV=1
Length = 419
Score = 186 bits (471), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 130/423 (30%), Positives = 212/423 (50%), Gaps = 28/423 (6%)
Query: 74 NPPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLY 133
P +G RD+ P+ + + V+ +G+ V+ PV+E + +KAG+E+ +++Y
Sbjct: 10 RPVRGMRDWMPQQLYALRRMEEVLSSVAEQYGYRRVETPVVEHFEVLAKKAGQEVINEIY 69
Query: 134 CFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQW 193
F D+ R + LR ++T +AR V+ + P++W+ + +RY+ GR RE +Q+
Sbjct: 70 YFRDKAGRELGLRFDMTVPIAR-VLSYNLDLPRPVRWYYFSKVFRYDEPQHGRYREFFQF 128
Query: 194 NMDIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGK 253
+++IG + A+AE++ + + G AS RI+ R+ + ++L H
Sbjct: 129 GVELIGSASPRADAEVVQLLAASLEAAG--ASKYVIRINDRRAVDKLLESLGALSHR-DA 185
Query: 254 VCIIIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIKSLTELE----------GEAV 303
V +DK KLP + + + S G+ A E++ S SL E GEA
Sbjct: 186 VYRALDKKLKLPREEVIGIMTSGGLPRDAAEKIYDTASEMSLDEAVEVLRRLDGRLGEAY 245
Query: 304 ADLKLLFSLA---EKFGYSDWIQFDASVVRGLAYYTGIVFECFDRDGKLRAICGGGRYDQ 360
A A E+F +FD S+VRGL YYTG+VFE F D L A+ GGGRYD
Sbjct: 246 AKFVKYLEAAVPLERF------KFDMSIVRGLDYYTGVVFEAFVGDYWL-AVGGGGRYDD 298
Query: 361 LLSTFGGDDIPACGFGFGDAVILELLKEKGLLPPLNHQVENIVCALDHNLQGAASMVATT 420
LL + G IPA GF G ++E + + + PL++ + D + A +A
Sbjct: 299 LLELYSGVKIPALGFAIGVERLMEAVGLQSVEKPLDY----YIYIFDDDAYKHAVALANR 354
Query: 421 LRGKGQSVDLVLESKPLKWVFKRAARINAQRLILVGTTEWQKGMVGVKILSSGEQYEIKL 480
LR +G SV + L K LK VF+ +I + L+L+G E +KG+V ++ L + E+ L
Sbjct: 355 LRKQGHSVVVELGEKNLKDVFEYVLKIGTRYLVLIGRKELEKGVVKIRDLQKRGEVEVPL 414
Query: 481 DEL 483
L
Sbjct: 415 SAL 417
>sp|Q980L3|SYH_SULSO Histidine--tRNA ligase OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=hisS PE=3 SV=1
Length = 426
Score = 185 bits (470), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 125/429 (29%), Positives = 224/429 (52%), Gaps = 40/429 (9%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
+G +D+ D +L F+++++ +G+ E+ PV+E LF K GEE+R +Y F+
Sbjct: 8 RGMKDYIGIDAEKIRYLESTFRDLAKKYGYSEIITPVVEEFKLFELKGGEELRQTMYVFK 67
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
D+ +R ++LRPE+TPS+AR IQ +S P++ F G +RY+ GR RE Q ++
Sbjct: 68 DKADREISLRPEITPSVARAYIQNLQSSPKPIRLFYFGTVYRYDEPQYGRYREFRQAGIE 127
Query: 197 IIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKVCI 256
+IG ++ A+ E++ + F+ ++ ++ D+ +I++ + ++++ ++I ++L V
Sbjct: 128 MIGDSSILADVEVLDLLYNFYDKLNLS-KDITIKINNIGIFRKIMDKYNIEDNLQEHVLH 186
Query: 257 IIDKIE-KLPLDVIKNDLKSAGM----------SEAAIEELLRVLSIKSLTELEGEAVAD 305
+IDK + L +++ ++K+ + EA +E+ I+SL ELE + D
Sbjct: 187 LIDKNKVDEALVILEKNIKNKDIMDFLNMILTKKEAKLED------IESLAELEEVSKLD 240
Query: 306 LK-----------LLFSLAEKFGYSDWIQFDASVVRGLAYYTGIVFECFDRDGKLRAICG 354
+K +L SL KF + D VRGLAYYTG++FE + +I G
Sbjct: 241 IKNEFEYLLRLSRILSSLNVKF------KVDLGFVRGLAYYTGLIFEVLHPSVQF-SIAG 293
Query: 355 GGRYDQLLSTFGGDDIPACGFGFGDAVILELLKEKGLLPPLNHQVENIVCALDHNLQGAA 414
GGRYD+L+ +GG PA GF G L ++K+ + P+N IV + A
Sbjct: 294 GGRYDKLIELYGGLPSPAIGFAIGVERTLLVIKDLKVEEPINV----IVVGISEEAIPAM 349
Query: 415 SMVATTLRGKGQSVDLVLESKPLKWVFKRAARINAQRLILVGTTEWQKGMVGVKILSSGE 474
V+ LR + V + + +PL + A + I++G E +K M+ V+ L + +
Sbjct: 350 FTVSRMLRKEEYKVVINTKDQPLSKLLPYYASQGFKLAIIIGKQELEKNMITVRNLITRK 409
Query: 475 QYEIKLDEL 483
Q I L+ +
Sbjct: 410 QISIPLENV 418
>sp|Q5LAE0|SYH_BACFN Histidine--tRNA ligase OS=Bacteroides fragilis (strain ATCC 25285 /
NCTC 9343) GN=hisS PE=3 SV=1
Length = 454
Score = 185 bits (469), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 125/445 (28%), Positives = 212/445 (47%), Gaps = 41/445 (9%)
Query: 76 PKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCF 135
PKGTRDF P +M RN++F+ ++V L+GF++++ P +E + + K GEE L+
Sbjct: 8 PKGTRDFSPVEMAKRNYIFNTIRDVYHLYGFQQIETPSMEMLSTLMGKYGEEGDKLLFKI 67
Query: 136 EDRGN------------RRVA----------LRPELTPSLARLVIQKGKSVSLPLKWFAV 173
++ GN R A LR +LT AR V+ ++ P K + +
Sbjct: 68 QNSGNYFSGITDEELLSRNAAKLASKFCEKGLRYDLTVPFARYVVMHRDEITFPFKRYQI 127
Query: 174 GQCWRYERMTRGRRREHYQWNMDIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISS 233
WR +R +GR RE YQ + D++G ++ E EL+ + T F R GI V +I++
Sbjct: 128 QPVWRADRPQKGRYREFYQCDADVVGSDSLLNEVELMQIVDTVFTRFGIR---VCIKINN 184
Query: 234 RKVLQEVLRCHSIPEHLFGKVCIIIDKIEKLPLDVIKNDLKSAGMSEAAI---------- 283
RK+L + + + + + IDK++K+ LD + +L G+S AI
Sbjct: 185 RKILTGIAEIIGEADKIV-DITVAIDKLDKIGLDNVNKELAEKGISGEAIAKLQPIILLS 243
Query: 284 ----EELLRVLSIKSLTELEGEAVADLKLLFSLAEKFGYSDWIQFDASVVRGLAYYTGIV 339
E+L + ++ S +E + V + + + + + G + I+ D ++ RGL YYTG +
Sbjct: 244 GTNAEKLATLKTVLSDSETGLKGVEESEFILNTLQTMGLKNEIELDLTLARGLNYYTGAI 303
Query: 340 FECFDRDGKLRAICGGGRYDQLLSTFGGDDIPACGFGFGDAVILELLKEKGLLPPLNHQV 399
FE D ++ +I GGGRYD L FG + G FG I ++L + L P
Sbjct: 304 FEVKALDVQIGSITGGGRYDNLTGVFGMAGVSGVGISFGADRIFDVLNQLELYPKEAVNG 363
Query: 400 ENIVCALDHNLQGAASM-VATTLRGKGQSVDLVLESKPLKWVFKRAARINAQRLILVGTT 458
++ + A SM + + R G ++ ++ +K A N + +VG
Sbjct: 364 TQLLFINFGEKEAAFSMGILSKARAAGIRAEIFPDAAKMKKQMSYANVKNIPFVAIVGEN 423
Query: 459 EWQKGMVGVKILSSGEQYEIKLDEL 483
E +G +K + SGEQ + +EL
Sbjct: 424 EMNEGKAMLKNMESGEQQLVTAEEL 448
>sp|Q8TV61|SYH_METKA Histidine--tRNA ligase OS=Methanopyrus kandleri (strain AV19 / DSM
6324 / JCM 9639 / NBRC 100938) GN=hisS PE=3 SV=1
Length = 421
Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 138/422 (32%), Positives = 211/422 (50%), Gaps = 19/422 (4%)
Query: 71 IDVNPPKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRD 130
+ V PKGTRDF PE+MR R WL +V R +G+EEV P E LF K+GEEI +
Sbjct: 6 MKVERPKGTRDFTPEEMRARRWLERYLLDVFRSYGYEEVLTPTFEHAKLFEEKSGEEILE 65
Query: 131 QLYCFEDRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREH 190
++Y F+D+ R++ALRPE+T + R + K+ PLK + C+RYE+ RGR RE
Sbjct: 66 EMYVFKDKKGRKLALRPEMTAPVVRFYNAELKTRPHPLKLAYIVNCFRYEQPQRGRWREF 125
Query: 191 YQWNMDIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHL 250
+Q +++ G A+ E+I F I + + R+ +L+ +L + I E +
Sbjct: 126 WQAGVEVFGSDRPEADVEVIELTYRIFDGI-LPSGAFEVRVGHLGILRGLLEEYGIGEDV 184
Query: 251 FGKVCIIIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSIKSLTELEGEAVADLKLLF 310
KV ++DK E LD +K L + +A L V++ +S +E+E +
Sbjct: 185 QNKVAHLVDKGE---LDEVKTLLPAEPAEKA-----LAVVTARSESEVEEAVSGKERAER 236
Query: 311 SLAEKFGYSDWI-------QFDASVVRGLAYYTGIVFECFDRD-GKLRAICGGGRYDQLL 362
+L SD + + D SV RGL YYTG+VFE + G GGGRYD L+
Sbjct: 237 ALENLMEISDALREAGVDHELDFSVARGLDYYTGMVFEIHVPELGGGSQCAGGGRYDDLV 296
Query: 363 STFGGDDIPACGFGFGDAVILELLKEKGLLPPLNHQVENIVCALDHNLQGAASMVATTLR 422
GG D+PA G G +L + +P + ++ L + G +A LR
Sbjct: 297 KELGGPDVPAVGMAIGFDRLLLAAELYDRIPDGVEETRALLIPLVRS--GKIWEIAAKLR 354
Query: 423 GKGQSVDLVLESKPLKWVFKRAARINAQRLILVGTTEWQKGMVGVKILSSGEQYEIKLDE 482
G V++ + K ++ A + ++VG E ++G V VK L +G Q E+ LD+
Sbjct: 355 KLGWVVNVEVSGKHIRKALSLADSLEYDYAVIVGERELKEGYVSVKNLKTGVQEEVPLDQ 414
Query: 483 LE 484
LE
Sbjct: 415 LE 416
>sp|Q8A6N7|SYH_BACTN Histidine--tRNA ligase OS=Bacteroides thetaiotaomicron (strain ATCC
29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) GN=hisS
PE=3 SV=1
Length = 454
Score = 182 bits (462), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 122/446 (27%), Positives = 213/446 (47%), Gaps = 43/446 (9%)
Query: 76 PKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCF 135
PKGTRDF P +M RN++F+ ++V L+GF++++ P +E + + K G+E L+
Sbjct: 8 PKGTRDFSPVEMAKRNYIFNTIRDVYHLYGFQQIETPSMEMLSTLMGKYGDEGDKLLFKI 67
Query: 136 EDRGNR----------------------RVALRPELTPSLARLVIQKGKSVSLPLKWFAV 173
++ G+ LR +LT AR V+ ++ P K + +
Sbjct: 68 QNSGDYFSGITDEELLSRNAVKLASKFCEKGLRYDLTVPFARYVVMHRDEITFPFKRYQI 127
Query: 174 GQCWRYERMTRGRRREHYQWNMDIIGVPAVTAEAELISSIITFFKRIGITASDVGFRISS 233
WR +R +GR RE YQ + D++G ++ E EL+ + T F R I V +I++
Sbjct: 128 QPVWRADRPQKGRYREFYQCDADVVGSDSLLNEVELMQIVDTVFSRFNIR---VCIKINN 184
Query: 234 RKVLQEVLRCHSIPEHLFGKVCIIIDKIEKLPLDVIKNDLKSAGMSEAAI---------- 283
RK+L + + + + + IDK++K+ L+ + +LK G+S+ AI
Sbjct: 185 RKILSGIAEIIGEADKIV-DITVAIDKLDKIGLENVNAELKEKGISDEAIAKLQPIILLS 243
Query: 284 ----EELLRVLSIKSLTELEGEAVADLKLLFSLAEKFGYSDWIQFDASVVRGLAYYTGIV 339
E+L + S+ + +E + V + + + E G + I+ D ++ RGL YYTG +
Sbjct: 244 GTNTEKLATLKSVLAASETGMKGVEESEFILGTLETMGLKNEIELDLTLARGLNYYTGAI 303
Query: 340 FECFDRDGKLRAICGGGRYDQLLSTFGGDDIPACGFGFGDAVILELLKEKGLLP--PLNH 397
FE D ++ +I GGGRYD L FG + G FG I ++L + L P +N
Sbjct: 304 FEVKALDVQIGSITGGGRYDNLTGVFGMAGVSGVGISFGADRIFDVLNQLELYPKEAVNG 363
Query: 398 QVENIVCALDHNLQGAASMVATTLRGKGQSVDLVLESKPLKWVFKRAARINAQRLILVGT 457
V D + SM+A +R G ++ ++ +K A + + +VG
Sbjct: 364 TELMFVNFGDKEAAFSMSMLA-KVRAAGIRAEIFPDAAKMKKQMSYANAKSVPFVAIVGE 422
Query: 458 TEWQKGMVGVKILSSGEQYEIKLDEL 483
E +G +K + +GEQ + ++EL
Sbjct: 423 NEMNEGKAMLKNMETGEQNLVSVEEL 448
>sp|Q7MTB3|SYH_PORGI Histidine--tRNA ligase OS=Porphyromonas gingivalis (strain ATCC
BAA-308 / W83) GN=hisS PE=3 SV=1
Length = 454
Score = 180 bits (456), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 131/447 (29%), Positives = 212/447 (47%), Gaps = 49/447 (10%)
Query: 76 PKGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQL--- 132
PKG RDF P +M RN++F +EV LFGF +++ P +E + + K GEE D+L
Sbjct: 7 PKGMRDFSPVEMSRRNYIFDTIREVYELFGFNQIETPTMEMLSTLMGKYGEE-GDRLLFK 65
Query: 133 ----------YCFED---RGNRRVA-------LRPELTPSLARLVIQKGKSVSLPLKWFA 172
+C E+ + + R A LR +LT AR V+ ++ P K +
Sbjct: 66 VLNSGDVLADFCAEELAEKNSLRFAAKACEKGLRYDLTVPFARYVVMHRNEINFPFKRYQ 125
Query: 173 VGQCWRYERMTRGRRREHYQWNMDIIGVPAVTAEAELISSIITFFKRIGITASDVGFRIS 232
+ WR +R +GR RE YQ + D+IG ++ E ELI I F+R+GI ++
Sbjct: 126 IQPVWRADRPQKGRYREFYQCDGDVIGSDSLMNEVELIQIISEVFRRLGIRTR---ILLN 182
Query: 233 SRKVLQEVLRCHSIPEHLFGKVCIIIDKIEKLPLDVIKNDLKSAGMSEAAIEELLRVLSI 292
+RK+L + + L + + IDK++K+ LD + ++L++ G E AIE L + +
Sbjct: 183 NRKILSGIAEVVDEADRL-TDITVAIDKLDKIGLDKVNDELRTKGFGEEAIERLRPFIEM 241
Query: 293 K----------------SLTELEGEAVADLKLLFSLAEKFGYSDWIQFDASVVRGLAYYT 336
K S T L+G + +L + E+ + D S+ RGL+YYT
Sbjct: 242 KGDNREKLDRLKSALASSETGLKG--IEELTYILDKVERVQLHSELMVDISLARGLSYYT 299
Query: 337 GIVFECFDRDGKLRAICGGGRYDQLLSTFGGDDIPACGFGFGDAVILELLKEKGLLPPLN 396
G + E D ++ +I GGGRYD L FG + + G FG I +++ + L P
Sbjct: 300 GAILEVKALDAEMGSITGGGRYDNLTGIFGLEGMSGVGISFGADRIYDVMMQLDLFPAEK 359
Query: 397 HQVENIVCALDHNLQGAASMVA--TTLRGKGQSVDLVLESKPLKWVFKRAARINAQRLIL 454
++ ++ + + A S++ LR +G +L E +K A N + L
Sbjct: 360 LTGTQLLF-VNFSEEDADSLLPLIQKLREQGLRTELYPEPAKIKKQMSYANAANIPYVAL 418
Query: 455 VGTTEWQKGMVGVKILSSGEQYEIKLD 481
VG E G V +K + +GEQ + D
Sbjct: 419 VGENERAAGQVNLKNMLTGEQQMLPAD 445
>sp|C3MZH9|SYH_SULIA Histidine--tRNA ligase OS=Sulfolobus islandicus (strain M.16.27)
GN=hisS PE=3 SV=1
Length = 426
Score = 180 bits (456), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 120/418 (28%), Positives = 227/418 (54%), Gaps = 16/418 (3%)
Query: 77 KGTRDFPPEDMRLRNWLFHNFQEVSRLFGFEEVDFPVLESEALFIRKAGEEIRDQLYCFE 136
+G +D+ D +L F++++ +G+ E+ PV+E LF K GEE+R+ +Y F+
Sbjct: 8 RGMKDYIGIDAEKIRYLESIFRDLAIKYGYSEIITPVVEEFKLFALKGGEELRETMYVFK 67
Query: 137 DRGNRRVALRPELTPSLARLVIQKGKSVSLPLKWFAVGQCWRYERMTRGRRREHYQWNMD 196
D+ +R ++LRPE+TPS+AR IQ +S P++ F G +RY+ GR RE Q ++
Sbjct: 68 DKADRELSLRPEITPSVARAYIQNLQSSPKPIRLFYFGTVYRYDEPQYGRYREFRQAGIE 127
Query: 197 IIGVPAVTAEAELISSIITFFKRIGITASDVGFRISSRKVLQEVLRCHSIPEHLFGKVCI 256
+IG ++ A+ E++ + F+ ++ ++ + +I++ + ++++ ++I ++L +
Sbjct: 128 MIGDSSILADLEVLDLLYNFYDKLNLSNDIII-KINNIGIFRKIMDKYNIEDNLQEHILH 186
Query: 257 IIDKIE-KLPLDVIKNDLKSAGM----SEAAIEELLRVLSIKSLTELEGEAVADLK---- 307
+IDK + LD+++ +LK+ + ++ ++ ++ I+SL ELE + D+K
Sbjct: 187 LIDKNKINEALDILEKNLKNKDIIDFFNKILTKKDTKLEDIESLAELEEVSRLDIKSEFL 246
Query: 308 LLFSLAEKFGYSDW-IQFDASVVRGLAYYTGIVFECFDRDGKLRAICGGGRYDQLLSTFG 366
LF L+ + + D VRGLAYYTG++FE + +I GGGRYD+L+ +G
Sbjct: 247 YLFRLSRILSNLNIKFKIDLGFVRGLAYYTGLIFEVLHPSVQF-SIAGGGRYDKLIELYG 305
Query: 367 GDDIPACGFGFGDAVILELLKEKGLLPPLNHQVENIVCALDHNLQGAASMVATTLRGKGQ 426
G PA GF G L ++K+ + P+N IV + + + MV+ LR +
Sbjct: 306 GLPSPAIGFAIGVERTLLVIKDLKVEEPVNV----IVIGMSEDTIPSMFMVSRILRKEEY 361
Query: 427 SVDLVLESKPLKWVFKRAARINAQRLILVGTTEWQKGMVGVKILSSGEQYEIKLDELE 484
V + + +PL + A + I++G E +K M+ V+ L + +Q + L+ +E
Sbjct: 362 KVVINTKDQPLSKLLPYYASQGFKVAIIIGKQELEKNMITVRNLITRKQISVPLENIE 419
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.139 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 182,213,237
Number of Sequences: 539616
Number of extensions: 7951731
Number of successful extensions: 23347
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 804
Number of HSP's successfully gapped in prelim test: 192
Number of HSP's that attempted gapping in prelim test: 19402
Number of HSP's gapped (non-prelim): 1282
length of query: 484
length of database: 191,569,459
effective HSP length: 121
effective length of query: 363
effective length of database: 126,275,923
effective search space: 45838160049
effective search space used: 45838160049
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)