Query 011528
Match_columns 483
No_of_seqs 148 out of 1301
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 10:00:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011528.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011528hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g22_A Hydroxycinnamoyl-COA sh 100.0 3.3E-79 1.1E-83 640.5 42.0 424 5-467 4-436 (439)
2 2xr7_A Malonyltransferase; xen 100.0 3.2E-71 1.1E-75 582.4 30.8 414 9-470 2-449 (453)
3 2bgh_A Vinorine synthase; VS, 100.0 2.2E-70 7.6E-75 570.7 36.7 396 5-470 1-414 (421)
4 2e1v_A Acyl transferase; BAHD 100.0 9.8E-71 3.4E-75 578.9 28.3 413 7-471 5-450 (454)
5 2rkv_A Trichothecene 3-O-acety 100.0 7.3E-63 2.5E-67 518.6 36.7 396 27-467 4-441 (451)
6 1q9j_A PAPA5, polyketide synth 99.1 1.7E-08 5.8E-13 103.3 23.8 260 68-364 36-313 (422)
7 4hvm_A Tlmii; PSI-biology, mid 98.4 2.9E-06 9.9E-11 88.8 13.5 253 68-364 49-327 (493)
8 1l5a_A Amide synthase, VIBH; n 98.3 5E-06 1.7E-10 85.3 14.0 249 68-364 35-304 (436)
9 2jgp_A Tyrocidine synthetase 3 98.3 2.6E-05 8.9E-10 82.1 19.0 256 68-364 133-400 (520)
10 2xhg_A Tyrocidine synthetase A 98.0 0.00013 4.6E-09 75.2 17.8 261 68-364 52-335 (466)
11 2vsq_A Surfactin synthetase su 98.0 3.4E-05 1.2E-09 90.5 14.8 260 68-364 49-327 (1304)
12 3fot_A 15-O-acetyltransferase; 97.6 0.0019 6.5E-08 68.0 17.9 232 64-306 71-348 (519)
13 3cla_A Type III chloramphenico 74.4 2.3 7.8E-05 38.9 3.8 44 140-183 164-209 (213)
14 2i9d_A Chloramphenicol acetylt 73.2 2.5 8.7E-05 38.7 3.8 28 155-182 189-216 (217)
15 1q23_A Chloramphenicol acetylt 72.9 2.6 8.9E-05 38.7 3.8 29 155-183 185-213 (219)
16 3b8k_A PDCE2;, dihydrolipoylly 70.5 3 0.0001 38.9 3.6 29 155-183 204-232 (239)
17 1scz_A E2, dihydrolipoamide su 70.1 3.2 0.00011 38.5 3.8 30 155-184 196-225 (233)
18 1dpb_A Dihydrolipoyl-transacet 70.1 3.2 0.00011 38.7 3.8 29 155-183 208-236 (243)
19 3rqc_A Probable lipoamide acyl 69.1 3 0.0001 38.4 3.3 30 155-184 187-216 (224)
20 2ii3_A Lipoamide acyltransfera 68.6 3.6 0.00012 38.9 3.8 29 155-183 224-252 (262)
21 3mae_A 2-oxoisovalerate dehydr 64.4 4.9 0.00017 37.8 3.8 30 155-184 210-239 (256)
22 3l60_A Branched-chain alpha-ke 63.3 5.3 0.00018 37.4 3.8 30 155-184 205-234 (250)
23 2kl8_A OR15; structural genomi 45.1 25 0.00086 25.2 3.9 36 68-103 12-48 (85)
24 4hhu_A OR280; engineered prote 42.6 46 0.0016 26.9 5.6 35 68-102 94-129 (170)
25 3dva_I Dihydrolipoyllysine-res 40.6 5.8 0.0002 40.3 0.0 30 155-184 391-420 (428)
26 4hhu_A OR280; engineered prote 40.4 46 0.0016 26.9 5.2 35 68-102 13-48 (170)
27 1x93_A Hypothetical protein HP 32.8 52 0.0018 22.2 3.6 37 241-284 3-39 (55)
28 2k1o_A Putative; repressor, tr 30.0 96 0.0033 21.7 4.7 41 237-284 13-53 (66)
29 2xl1_A Arginine attenuator pep 24.3 43 0.0015 18.8 1.7 18 265-282 7-24 (26)
30 2xt6_A 2-oxoglutarate decarbox 22.6 50 0.0017 37.7 3.6 30 155-184 192-221 (1113)
No 1
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A
Probab=100.00 E-value=3.3e-79 Score=640.53 Aligned_cols=424 Identities=25% Similarity=0.418 Sum_probs=348.7
Q ss_pred CeeEEEEeeeEEEEcCCCCCCccccCCcccCcCCceeeEEEEEEeCCcccccccCcCCCchhHHHHHHHHHHHHHHhccc
Q 011528 5 GDFTVTVSKKEVVAAVLPLQEHWLPQSNLDLLLPAIDVGVFFCYKKPAAAADNINKSFGFGSMVDVLKKAMAEALVSYYA 84 (483)
Q Consensus 5 ~~~~V~i~~~~~V~p~~p~~~~~~~LS~lD~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~ 84 (483)
+.|+|+|.++++|+|+.|++.+.++||+||+++++.|+..+|||+.+... ....+++||+||+++|++|||
T Consensus 4 ~~~~V~i~~~~~V~P~~~tp~~~~~LS~lD~~~~~~~~~~~~~y~~~~~~---------~~~~~~~Lk~sLs~~L~~f~p 74 (439)
T 4g22_A 4 GSMKIEVKESTMVRPAQETPGRNLWNSNVDLVVPNFHTPSVYFYRPTGSS---------NFFDAKVLKDALSRALVPFYP 74 (439)
T ss_dssp --CCEEEEEEEEECCSSCCCCCEECCCHHHHSCCTTCCCEEEEECCCSCT---------TTTCHHHHHHHHHHHTTTTGG
T ss_pred CceEEEEeeeEEEeCCCCCCCCeecCChhHhCccccceeeEEEEcCCCCc---------cccHHHHHHHHHHHHHhhccc
Confidence 35789999999999999998999999999999889999999999864321 123589999999999999999
Q ss_pred cccEEEecCCCCeEEEeCCCCeeEEEEecccccccccCCCCCchhhcccCcCcC------CCceEEEEEeEEecCcEEEE
Q 011528 85 LAGEVVYNDVGEPELLCNNRGVDFVEAYANVELKDLNLYNPDDTIEGKLVAKKK------KNGVLSVQATELKCGGIVVA 158 (483)
Q Consensus 85 LaGrl~~~~~g~~~i~~~~~gv~f~~a~~~~~~~dl~~~~p~~~~~~~l~p~~~------~~pll~vQvt~f~~GG~~l~ 158 (483)
|||||+.+++|+++|+|+++||.|+||+++++++|+....|... .++|+|..+ ..|++.+|||+|+|||++||
T Consensus 75 lAGRl~~~~~g~~~i~c~~~Gv~fv~A~~d~~l~~l~~~~p~~~-~~~l~p~~~~~~~~~~~pll~vQvT~f~cGG~~lg 153 (439)
T 4g22_A 75 MAGRLKRDEDGRIEIECNGEGVLFVEAESDGVVDDFGDFAPTLE-LRRLIPAVDYSQGISSYALLVLQVTYFKCGGVSLG 153 (439)
T ss_dssp GGCEEEECTTSCEEEECCCCCEEEEEEEESSCGGGGTTCCCCGG-GGGGSCCCCTTSCTTSSCSEEEEEEECTTSCEEEE
T ss_pred cceeeeeCCCCCEEEEECCCCCEEEEEEcCCcHHHhcCCCCCHH-HHhcCCCCCcccccccCceeEEEEEEecCCCEEEE
Confidence 99999998889999999999999999999999999964445544 356777532 46999999999999999999
Q ss_pred eeeccccchhhhHHHHHHHHHHHHcCCCCCCCCCcCccccCCCCCCCCCcccccccCCCCCCCCCCCCCCCCCCcccc-C
Q 011528 159 CTFDHRIADAYSTDMFLVSWAEIAQSKPISVMPSFRRSMLNPRRPLCIDHEFDNMYVPISTLPPPPPPPHNNPQEANC-N 237 (483)
Q Consensus 159 ~~~~H~v~Dg~g~~~fl~~Wa~~~rg~~~~~~P~~dr~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 237 (483)
+++||.++||.|+.+||++||++|||.+....|++||+++.+++||.... .+.+|.+.+....+. . ...... .
T Consensus 154 ~~~~H~v~Dg~~~~~Fl~~wa~~~rg~~~~~~P~~dr~~l~~~~pp~~~~-~~~~~~~~~~~~~~~-~----~~~~~~~~ 227 (439)
T 4g22_A 154 VGMRHHAADGFSGLHFINSWSDMARGLDVTLPPFIDRTLLRARDPPQPQF-QHIEYQPPPALAVSP-Q----TAASDSVP 227 (439)
T ss_dssp EEECTTTCCHHHHHHHHHHHHHHHTTCCCSSCCBCCGGGGCCCSSCCCSS-CCGGGSCCC--------------------
T ss_pred EEeeeccCcHHHHHHHHHHHHHHhCCCCCCCCCccccccccCCCCCCCCc-CcccccCCCCCcccc-c----ccccCCcc
Confidence 99999999999999999999999999877677999999998877775431 233444332211100 0 000011 5
Q ss_pred CceEEEEEeCHHHHHHHHHHhhcCC-CCCCChhHHHHHHHHHHHHHhcC-CCCceEEEEEEEeCCCcCCCCCCCCCCCCC
Q 011528 238 KLVSRIYYIKSEQLNELQLLATTGS-NGRRTKLESFSAFLWKMVARSAN-DGMMITKMGIVVDGRTRLSISSNKGDHNNN 315 (483)
Q Consensus 238 ~~~~~~f~f~~~~i~~Lk~~a~~~~-~~~~St~d~l~A~lW~~~~~Ar~-~~~~~~~l~~~vd~R~rl~~~~~lP~~~~~ 315 (483)
+++.++|+|++++|++||+++.++. ..++|++|+|+||+|||++|||. ++++.+.+.++||+|+|++|| +|
T Consensus 228 ~~~~~~f~fs~~~i~~LK~~a~~~~~~~~~St~dal~A~iWr~~~rAr~~~~~~~~~l~~~vd~R~rl~Pp--lp----- 300 (439)
T 4g22_A 228 ETAVSIFKLTREQISALKAKSKEDGNTISYSSYEMLAGHVWRCACKARGLEVDQGTKLYIATDGRARLRPS--LP----- 300 (439)
T ss_dssp CEEEEEEEECHHHHHHHHHGGGGGGCCCCCCHHHHHHHHHHHHHHHHTTCCTTCEEEEEEEEECTTTSSSC--CC-----
T ss_pred cceEEEEEECHHHHHHHHHHhhccCCCCCccHHHHHHHHHHHHHHHhcCCCCCCcEEEEEEEcccCCCCCC--CC-----
Confidence 6899999999999999999998653 35799999999999999999994 567899999999999999987 55
Q ss_pred CcccccccccCCCcccccccccccccchhhhhcCcHHHHHHHHHHHHHhcCChHHHhhHHHHHHhcCCCcccchhccCCC
Q 011528 316 NVNKSISCMAMGSYFGNVLSIPFGGQNVKELVEKPLSWVATQVHNFLENAVTKDHFLGLIDWVEAHKPDPALAKIYCTPS 395 (483)
Q Consensus 316 ~~~~~~~~~~p~~Y~GN~~~~~~~~~~~~dl~~~~l~~~A~~Ir~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (483)
.+||||++..+.+.++++||.+++|+++|.+||+++++ ++++++++.++|++.+++...+.+.. ..
T Consensus 301 -----------~~Y~GN~v~~~~~~~~~~el~~~~L~~~A~~Ir~ai~~-~~~e~~~~~~~~~~~~~~~~~~~~~~--~~ 366 (439)
T 4g22_A 301 -----------PGYFGNVIFTATPIAIAGDLEFKPVWYAASKIHDALAR-MDNDYLRSALDYLELQPDLKALVRGA--HT 366 (439)
T ss_dssp -----------TTBCSCCEEEECCEEEHHHHHHSCHHHHHHHHHHHHHT-CSHHHHHHHHHHHHTCSCSTTCCCCH--HH
T ss_pred -----------CCcccceeehhhcceEHHHHhhCcHHHHHHHHHHHHHh-hCHHHHHHHHHHHHhCccchhhcccC--Cc
Confidence 99999999999999999999999999999999999976 79999999999998775433221100 00
Q ss_pred CCCCeEEEecCCCCCCCccccCCCccccCCCCCCCCCCceEEEEcCCCCCCCcEEEEEEcCHHHHHHHHhcc
Q 011528 396 SDGPAFVVSSGQRFPVSKVDFGWGKPAFGSYHFPWGGDAGYVMPMPSPAGNGDWVVYMHLSEKQVDLIETQA 467 (483)
Q Consensus 396 ~~~~~~~~ssw~~~~~y~~DFG~G~P~~~~~~~p~~~~~g~v~i~p~~~~~g~~~v~v~L~~~~m~~l~~d~ 467 (483)
..+.++.+|||+++++|++|||||||+++++.. ...+|.++++|+++++|+++|.|+|++++|++|++..
T Consensus 367 ~~~~~~~vssw~r~~~y~~DFGwGkP~~~~~~~--~~~~g~~~~~p~~~~~ggi~v~v~L~~~~m~~f~~~~ 436 (439)
T 4g22_A 367 FKCPNLGITSWVRLPIHDADFGWGRPIFMGPGG--IAYEGLSFILPSPTNDGSMSVAISLQGEHMKLFQSFL 436 (439)
T ss_dssp HCTTCEEEEECTTSCTTCCCCSSCCCSEEEESS--CCSTTEEEEEECTTCSSCEEEEEEEEHHHHHHHHHHH
T ss_pred CcCCcEEEeecCcCCccccccCCCCcceeeccc--cCCCcEEEEeecCCCCCcEEEEEECCHHHHHHHHHHh
Confidence 124679999999999999999999999876432 2356888999998888999999999999999999875
No 2
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}
Probab=100.00 E-value=3.2e-71 Score=582.41 Aligned_cols=414 Identities=19% Similarity=0.258 Sum_probs=326.3
Q ss_pred EEEeeeEEEEcCCC-CCCccccCCcccCc-CCceeeEEEEEEeCCcccccccCcCCCchhHHHHHHHHHHHHHHhccccc
Q 011528 9 VTVSKKEVVAAVLP-LQEHWLPQSNLDLL-LPAIDVGVFFCYKKPAAAADNINKSFGFGSMVDVLKKAMAEALVSYYALA 86 (483)
Q Consensus 9 V~i~~~~~V~p~~p-~~~~~~~LS~lD~~-~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~La 86 (483)
|+|.++++|+|+.| ++.+.++||+||++ ++..|+..+|||+.+... ...+++++++||+||+++|++|||||
T Consensus 2 v~v~~~~~V~P~~~~~~~~~~~LS~lD~~~~~~~~~~~~~~y~~~~~~------~~~~~~~~~~Lk~sLs~~L~~~~plA 75 (453)
T 2xr7_A 2 ASVIEQCQVVPSPGSATELTLPLTYFDHVWLAFHRMRRILFYKLPISR------PDFVQTIIPTLKDSLSLTLKYYLPLA 75 (453)
T ss_dssp CEEEEESCCCCCTTCCSEEEEECCHHHHGGGGSCCEEEEEEEECCCCS------HHHHHTHHHHHHHHHHHHHTTSGGGG
T ss_pred eEEEEEEEecCCCCCCCCceECCCHHHhhhhhcCCccEEEEEeCCCCC------chhHHHHHHHHHHHHHHHhhhccccC
Confidence 89999999999987 56789999999998 445689999999865321 00134678999999999999999999
Q ss_pred cEEEecC--CCCeEEEeC-CCCeeEEEEecccccccccCCC-CCchhhcccCcCcC----C-----CceEEEEEeEEecC
Q 011528 87 GEVVYND--VGEPELLCN-NRGVDFVEAYANVELKDLNLYN-PDDTIEGKLVAKKK----K-----NGVLSVQATELKCG 153 (483)
Q Consensus 87 Grl~~~~--~g~~~i~~~-~~gv~f~~a~~~~~~~dl~~~~-p~~~~~~~l~p~~~----~-----~pll~vQvt~f~~G 153 (483)
|||+.++ +|+++|+|+ ++||.|+||+++.+++++.... +......+|+|..+ . .|++.+|||+|+||
T Consensus 76 GRl~~~~~~~g~~~i~c~~~~gv~fv~A~~~~~l~~l~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvT~f~cG 155 (453)
T 2xr7_A 76 GNVACPQDWSGYPELRYVTGNSVSVIFSESDMDFNYLIGYHPRNTKDFYHFVPQLAEPKDAPGVQLAPVLAIQVTLFPNH 155 (453)
T ss_dssp SCCEEESSTTCCCEEEEETTCCCEEEEEECCSCHHHHTCSSCCCGGGGGGGSCCCCCCEEETTEEECCCEEEEEEEETTT
T ss_pred eeEEccCCCCCCEEEEecCCCceEEEEEecCCCHHHhhccCCCChhhhhcCCCCCCCcccccccccCCeEEEEEEEccCC
Confidence 9999876 799999999 5999999999999999995322 12222456777542 2 79999999999999
Q ss_pred cEEEEeeeccccchhhhHHHHHHHHHHHHc-CC-C----CCCCCCcCccccCCCCCCCCCcccccccCCCCCCCCCCCCC
Q 011528 154 GIVVACTFDHRIADAYSTDMFLVSWAEIAQ-SK-P----ISVMPSFRRSMLNPRRPLCIDHEFDNMYVPISTLPPPPPPP 227 (483)
Q Consensus 154 G~~l~~~~~H~v~Dg~g~~~fl~~Wa~~~r-g~-~----~~~~P~~dr~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 227 (483)
|++||+++||.++||.|+.+||++||++|| |. + ....|.+||+.+. .|+.........+...+... +. .
T Consensus 156 G~~lg~~~~H~v~Dg~~~~~Fl~~wa~~~r~G~~~~~~~~~~~P~~dr~~l~--~p~~~~~~~~~~~~~~~~~~-~~-~- 230 (453)
T 2xr7_A 156 GISIGFTNHHVAGDGATIVKFVRAWALLNKFGGDEQFLANEFIPFYDRSVIK--DPNGVGMSIWNEMKKYKHMM-KM-S- 230 (453)
T ss_dssp EEEEEEEECTTTCCSHHHHHHHHHHHHHHHTTTCGGGSCGGGSCBCCCSSSC--CSSCHHHHTTTTGGGCTTTS-CC-S-
T ss_pred cEEEEEeeeeeeechhHHHHHHHHHHHHhhcCCCcccCCCCCCCcccccccc--CCCCcchHHHHhccccCCcc-cc-c-
Confidence 999999999999999999999999999999 86 3 2345899998775 23221111111110000000 00 0
Q ss_pred CCCCCccccCCceEEEEEeCHHHHHHHHHHhhcCCC--CCCChhHHHHHHHHHHHHHhcC------CCCceEEEEEEEeC
Q 011528 228 HNNPQEANCNKLVSRIYYIKSEQLNELQLLATTGSN--GRRTKLESFSAFLWKMVARSAN------DGMMITKMGIVVDG 299 (483)
Q Consensus 228 ~~~~~~~~~~~~~~~~f~f~~~~i~~Lk~~a~~~~~--~~~St~d~l~A~lW~~~~~Ar~------~~~~~~~l~~~vd~ 299 (483)
.. ....+++.++|+|++++|++||+++.++.. .++|+||+|+||+|+|+++||. ++++.+.+.++||+
T Consensus 231 -~~---~~~~~~~~~~f~f~~~~i~~Lk~~a~~~~~~~~~~St~~~l~A~lW~~~~~Ar~~~~~~~~~~~~~~l~~~vd~ 306 (453)
T 2xr7_A 231 -DV---VTPPDKVRGTFIITRHDIGKLKNLVLTRRPKLTHVTSFTVTCAYVWTCIIKSEAATGEEIDENGMEFFGCAADC 306 (453)
T ss_dssp -CC---CCCCSCCCEEEEECHHHHHHHHHHHHHHSCCCSCCCHHHHHHHHHHHHHHHHHHHTTCCCCTTSEEEEEEECCT
T ss_pred -cc---cCCCCceEEEEEECHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHHHHHhccccccCCCCcceEEEEEecc
Confidence 00 013456789999999999999999976432 5799999999999999999983 56778999999999
Q ss_pred CCcCCCCCCCCCCCCCCcccccccccCCCcccccccccccccchhhhhc-CcHHHHHHHHHHHHHhc-CChH-HHhhHHH
Q 011528 300 RTRLSISSNKGDHNNNNVNKSISCMAMGSYFGNVLSIPFGGQNVKELVE-KPLSWVATQVHNFLENA-VTKD-HFLGLID 376 (483)
Q Consensus 300 R~rl~~~~~lP~~~~~~~~~~~~~~~p~~Y~GN~~~~~~~~~~~~dl~~-~~l~~~A~~Ir~~i~~~-~~~~-~~~~~~~ 376 (483)
|+|++|| +| .+||||++..+.+.++++||.+ .+|+++|..||+++++. ++++ ++++ +
T Consensus 307 R~rl~pp--lP----------------~~Y~GN~~~~~~~~~~~~el~~~~~l~~~a~~Ir~ai~~~~~~~e~~~~~--~ 366 (453)
T 2xr7_A 307 RAQFNPP--LP----------------PSYFGNALVGYVARTRQVDLAGKEGFTIAVELIGEAIRKRMKDEEWILSG--S 366 (453)
T ss_dssp TSCSSSC--CC----------------TTBCSCCCCEEEEEEEHHHHTSSSHHHHHHHHHHHHHTTSSSCHHHHHSS--C
T ss_pred cccCCCC--CC----------------cccccceeeeeeeeeeHHHhcCcchHHHHHHHHHHHHHhhccCCccchhh--H
Confidence 9999987 55 9999999999999999999995 89999999999999652 4677 8888 7
Q ss_pred HHHhcCCCcccchhccCCCCCCCeEEEecCCCCCCCccccCCCccccCCCCCCCCCCce--EEEEcCCCCCCCcEEEEEE
Q 011528 377 WVEAHKPDPALAKIYCTPSSDGPAFVVSSGQRFPVSKVDFGWGKPAFGSYHFPWGGDAG--YVMPMPSPAGNGDWVVYMH 454 (483)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ssw~~~~~y~~DFG~G~P~~~~~~~p~~~~~g--~v~i~p~~~~~g~~~v~v~ 454 (483)
|++..++. + ....+.+|||+++++|++|||||+|+++++.. ...+| .++++|+++++|+++|.|+
T Consensus 367 ~~~~~~~~------~-----~~~~~~vssw~~~~~y~~DFG~G~P~~v~~~~--~~~~g~~~~~l~~~~~~~ggi~v~v~ 433 (453)
T 2xr7_A 367 WFKEYDKV------D-----AKRSLSVAGSPKLDLYAADFGWGRPEKLEFVS--IDNDDGISMSLSKSKDSDGDLEIGLS 433 (453)
T ss_dssp TTSCCCCS------C-----GGGEEEECSCSSCCGGGCCCSSCSCSEEEEGG--GSSCSSCEEEEEECSSSTTCEEEEEC
T ss_pred HHHHHHhh------c-----cCCcEEEeccccCCccccccCCCcceEEEeee--ecCCCceEEEEeecCCCCCCEEEEEE
Confidence 77653321 1 12478999999999999999999999886422 12457 7778888888999999999
Q ss_pred cCHHHHHHHHhccccc
Q 011528 455 LSEKQVDLIETQASNV 470 (483)
Q Consensus 455 L~~~~m~~l~~d~~~~ 470 (483)
|++++|++|+++..+.
T Consensus 434 L~~~~m~~f~~~~~~~ 449 (453)
T 2xr7_A 434 LSKTRMNAFAAMFTHG 449 (453)
T ss_dssp CCHHHHHHHHHHHHHH
T ss_pred eCHHHHHHHHHHHHHH
Confidence 9999999999876543
No 3
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=100.00 E-value=2.2e-70 Score=570.70 Aligned_cols=396 Identities=19% Similarity=0.313 Sum_probs=319.7
Q ss_pred CeeEEEEeeeEEEEcCCCCCC--ccccCCcccCcCCceeeEEEEEEeCCcccccccCcCCCchhHHHHHHHHHHHHHHhc
Q 011528 5 GDFTVTVSKKEVVAAVLPLQE--HWLPQSNLDLLLPAIDVGVFFCYKKPAAAADNINKSFGFGSMVDVLKKAMAEALVSY 82 (483)
Q Consensus 5 ~~~~V~i~~~~~V~p~~p~~~--~~~~LS~lD~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~ 82 (483)
|.|+|+|.++++|+|+.|++. +.++||+||+++++.|+..+|||+.++.. .++....+++||+||+++|++|
T Consensus 1 m~m~v~v~~~~~V~P~~ptp~~~~~~~LS~lD~~~~~~~~~~~~~y~~~~~~------~~~~~~~~~~Lk~sLs~~L~~~ 74 (421)
T 2bgh_A 1 MAPQMEKVSEELILPSSPTPQSLKCYKISHLDQLLLTCHIPFILFYPNPLDS------NLDPAQTSQHLKQSLSKVLTHF 74 (421)
T ss_dssp ---CEEEEEEEEEECSSCCCTTSCCCBCCHHHHTSCSSEEEEEEEECCCSSC------CCCHHHHHHHHHHHHHHHTTTS
T ss_pred CCceEEEeeeEEEeCCCCCCCCCcccCCChHHhcccccccceEEEEeCCCcc------ccchhhHHHHHHHHHHHHhhhc
Confidence 457899999999999988764 59999999999888999999999865321 1124567999999999999999
Q ss_pred cccccEEEecCCCCeEEEeCCCCeeEEEEecccccccccCCCCCchhhcccCcCc---------CCCceEEEEEeEEecC
Q 011528 83 YALAGEVVYNDVGEPELLCNNRGVDFVEAYANVELKDLNLYNPDDTIEGKLVAKK---------KKNGVLSVQATELKCG 153 (483)
Q Consensus 83 p~LaGrl~~~~~g~~~i~~~~~gv~f~~a~~~~~~~dl~~~~p~~~~~~~l~p~~---------~~~pll~vQvt~f~~G 153 (483)
|||||||+. +++|+|+++||.|+||+++++++|+....|.....++|+|.. ...|++.+|||+|+||
T Consensus 75 ~plAGRl~~----~~~i~c~~~Gv~fv~A~~d~~l~~~~~~~p~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvt~f~cg 150 (421)
T 2bgh_A 75 YPLAGRINV----NSSVDCNDSGVPFVEARVQAQLSQAIQNVVELEKLDQYLPSAAYPGGKIEVNEDVPLAVKISFFECG 150 (421)
T ss_dssp GGGGSEEET----TTEEECCCCCEEEEEEEESSCHHHHHSCCSSGGGGGGGSSSCSSSSSSSCCCTTCSEEEEEEECTTS
T ss_pred chhccccCC----CcEEEEcCCceEEEEEEEcCCHHHHhccCCChHHHHhcCCCCCCccccccccCCceEEEEEEEEcCC
Confidence 999999962 589999999999999999999999854335443345677643 2479999999999999
Q ss_pred cEEEEeeeccccchhhhHHHHHHHHHHHHcCCCCCCCCCcCc-cccCCC--CCCCCCcccccccCCCCCCCCCCCCCCCC
Q 011528 154 GIVVACTFDHRIADAYSTDMFLVSWAEIAQSKPISVMPSFRR-SMLNPR--RPLCIDHEFDNMYVPISTLPPPPPPPHNN 230 (483)
Q Consensus 154 G~~l~~~~~H~v~Dg~g~~~fl~~Wa~~~rg~~~~~~P~~dr-~~l~~~--~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (483)
|++||+++||.++||.|+.+|+++||++|||.+....|.+|| +.+.+. +++. +. .
T Consensus 151 G~~lg~~~~H~v~Dg~~~~~fl~~wa~~~rg~~~~~~P~~dr~~~l~p~~~~~~~-----------------~~-~---- 208 (421)
T 2bgh_A 151 GTAIGVNLSHKIADVLSLATFLNAWTATCRGETEIVLPNFDLAARHFPPVDNTPS-----------------PE-L---- 208 (421)
T ss_dssp CEEEEEEEETTTCCHHHHHHHHHHHHHHHTTCSCCCCCBCSHHHHHSCCCTTCCC-----------------CC-C----
T ss_pred CEEEEEEeeEEechHHHHHHHHHHHHHHhcCCCCCCCCccccccccCCCcccCCC-----------------Cc-c----
Confidence 999999999999999999999999999999975445788999 655421 1111 00 0
Q ss_pred CCccccCCceEEEEEeCHHHHHHHHHHhhcCCC-CCCChhHHHHHHHHHHHHHhcC---CCCceEEEEEEEeCCCcCCCC
Q 011528 231 PQEANCNKLVSRIYYIKSEQLNELQLLATTGSN-GRRTKLESFSAFLWKMVARSAN---DGMMITKMGIVVDGRTRLSIS 306 (483)
Q Consensus 231 ~~~~~~~~~~~~~f~f~~~~i~~Lk~~a~~~~~-~~~St~d~l~A~lW~~~~~Ar~---~~~~~~~l~~~vd~R~rl~~~ 306 (483)
....+++.++|+|++++|++||+++.++.. .++|++|+|+||+|+|+++||. ++++.+.+.++||+|+|++||
T Consensus 209 ---~~~~~~~~~~f~f~~~~i~~LK~~a~~~~~~~~~St~d~l~A~iW~~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~pp 285 (421)
T 2bgh_A 209 ---VPDENVVMKRFVFDKEKIGALRAQASSASEEKNFSRVQLVVAYIWKHVIDVTRAKYGAKNKFVVVQAVNLRSRMNPP 285 (421)
T ss_dssp ---CCCSSEEEEEEEECHHHHHHHHHHTC-----CCCCHHHHHHHHHHHHHHHHHHHHSCCCSCEEEEEEEESGGGSSSC
T ss_pred ---CCccceEEEEEEECHHHHHHHHHHhhccCCCCCCchhHhHHHHHHHHHHHHhcccCCCCCceEEEEEecCccccCCC
Confidence 013467899999999999999999986543 5799999999999999999983 356789999999999999987
Q ss_pred CCCCCCCCCCcccccccccCCCcccccccccccccchhhhhcCcHHHHHHHHHHHHHhcCChHHHhhHHHHHHhcCCCcc
Q 011528 307 SNKGDHNNNNVNKSISCMAMGSYFGNVLSIPFGGQNVKELVEKPLSWVATQVHNFLENAVTKDHFLGLIDWVEAHKPDPA 386 (483)
Q Consensus 307 ~~lP~~~~~~~~~~~~~~~p~~Y~GN~~~~~~~~~~~~dl~~~~l~~~A~~Ir~~i~~~~~~~~~~~~~~~~~~~~~~~~ 386 (483)
+| .+||||++..+.+.+++++ +.+|+++|..||+++++ +++++++++.++.+.....
T Consensus 286 --lP----------------~~y~GN~~~~~~~~~~~~~--~~~l~~~a~~ir~ai~~-~~~~~~~~~~~~~~~~~~~-- 342 (421)
T 2bgh_A 286 --LP----------------HYAMGNIATLLFAAVDAEW--DKDFPDLIGPLRTSLEK-TEDDHNHELLKGMTCLYEL-- 342 (421)
T ss_dssp --CC----------------TTBCSCCEEEEEEEECTTC--CCCGGGGHHHHHHHTCC-CSSCHHHHHHHHHHHHHTS--
T ss_pred --CC----------------CCccceEEEEEEEEecccc--cccHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhhcc--
Confidence 55 9999999998888888876 78999999999999976 7889999888776532110
Q ss_pred cchhccCCCCCCCeEEEecCCCCCCCccccCCCccccCCCCCCCCCCceEEEEcCCCCCCCcEEEEEEcCHHHHHHHHhc
Q 011528 387 LAKIYCTPSSDGPAFVVSSGQRFPVSKVDFGWGKPAFGSYHFPWGGDAGYVMPMPSPAGNGDWVVYMHLSEKQVDLIETQ 466 (483)
Q Consensus 387 ~~~~~~~~~~~~~~~~~ssw~~~~~y~~DFG~G~P~~~~~~~p~~~~~g~v~i~p~~~~~g~~~v~v~L~~~~m~~l~~d 466 (483)
+ ....+.+|||+++++|++|||||+|+++++.. ...+|+++++|+++++ |++|.|+|++++|++|+++
T Consensus 343 -------~--~~~~~~vssw~~~~~y~~DFGwGkP~~v~~~~--~~~~g~~~~~p~~~~~-gi~v~v~L~~~~m~~f~~e 410 (421)
T 2bgh_A 343 -------E--PQELLSFTSWCRLGFYDLDFGWGKPLSACTTT--FPKRNAALLMDTRSGD-GVEAWLPMAEDEMAMLPVE 410 (421)
T ss_dssp -------C--GGGEEEEEEETTSCGGGCCSSSCCCSEEECCC--CCSTTEEEEEECTTSS-SEEEEEEEEHHHHHHSCHH
T ss_pred -------C--CCCeEEEeccccCCCcccccCCCccCeecccc--cCcCCEEEEEecCCCC-eEEEEEEcCHHHHHHHHHH
Confidence 0 12368999999999999999999999986522 2346888899987655 6999999999999999986
Q ss_pred cccc
Q 011528 467 ASNV 470 (483)
Q Consensus 467 ~~~~ 470 (483)
..++
T Consensus 411 ~~~~ 414 (421)
T 2bgh_A 411 LLSL 414 (421)
T ss_dssp HHTT
T ss_pred HHHh
Confidence 5443
No 4
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=100.00 E-value=9.8e-71 Score=578.87 Aligned_cols=413 Identities=19% Similarity=0.243 Sum_probs=320.5
Q ss_pred eEEEEeeeEEEEcCCC-CCCccccCCcccCcC-CceeeEEEEEEeCCcccccccCcCCCchhHHHHHHHHHHHHHHhccc
Q 011528 7 FTVTVSKKEVVAAVLP-LQEHWLPQSNLDLLL-PAIDVGVFFCYKKPAAAADNINKSFGFGSMVDVLKKAMAEALVSYYA 84 (483)
Q Consensus 7 ~~V~i~~~~~V~p~~p-~~~~~~~LS~lD~~~-~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~ 84 (483)
.+|+|.++++|+|+.| ++.+.++||+||++. +..|+..+|||+.+.... ..+++++++||+||+++|++|||
T Consensus 5 ~~v~v~~~~~V~P~~~~~~~~~~~LS~lD~~~~~~~~~~~~~~y~~~~~~~------~~~~~~~~~Lk~sLs~~L~~~~p 78 (454)
T 2e1v_A 5 PILTVLEQSQVSPPPDTLGDKSLQLTFFDFFWLRSPPINNLFFYELPITRS------QFTETVVPNIKHSLSITLKHFYP 78 (454)
T ss_dssp -CEEEEEEEEECCCTTSCCCEEEECCHHHHTTTTCCCEEEEEEEECCCCHH------HHHHTHHHHHHHHHHHHHTTCGG
T ss_pred ceEEEEEEEEEeCCCCCCCCceecCchHHhhhhccCCccEEEEEeCCCCcc------hhhHHHHHHHHHHHHHHhhhccc
Confidence 5799999999999987 567899999999984 456899999998653210 01345789999999999999999
Q ss_pred cccEEE-ec-CCCCeEEEeC-CCCeeEEEEecccccccccCCCC-CchhhcccCcCcC---------CCceEEEEEeEEe
Q 011528 85 LAGEVV-YN-DVGEPELLCN-NRGVDFVEAYANVELKDLNLYNP-DDTIEGKLVAKKK---------KNGVLSVQATELK 151 (483)
Q Consensus 85 LaGrl~-~~-~~g~~~i~~~-~~gv~f~~a~~~~~~~dl~~~~p-~~~~~~~l~p~~~---------~~pll~vQvt~f~ 151 (483)
|||||+ .+ ++|+++|+|+ ++||.|+||+++.+++|+....+ ......+|+|..+ +.|++.+|||+|+
T Consensus 79 lAGRl~~~~~~~g~~~i~c~~~~gv~fv~A~~~~~l~~l~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvT~f~ 158 (454)
T 2e1v_A 79 FVGKLVVYPAPTKKPEICYVEGDSVAVTFAECNLDLNELTGNHPRNCDKFYDLVPILGESTRLSDCIKIPLFSVQVTLFP 158 (454)
T ss_dssp GGSEEEECSSSSSCCEEEECTTCCEEEEEEEECSCGGGTSSSSCEEGGGGGGGSCCCCCCEECSSCEEEECEEEEEEEET
T ss_pred cceeeeeccCCCCCEEEEECCCCcEEEEEEEeCCCHHHhcCCCCCcchhhhcCCCCCCCcccccccccCceEEEEEEEec
Confidence 999998 65 5799999999 59999999999999999953322 1222456777532 1299999999999
Q ss_pred cCcEEEEeeeccccchhhhHHHHHHHHHHHHc-CCC-C-----CCCCCcCccccCCCCCCCCCcccccccCCCCC---CC
Q 011528 152 CGGIVVACTFDHRIADAYSTDMFLVSWAEIAQ-SKP-I-----SVMPSFRRSMLNPRRPLCIDHEFDNMYVPIST---LP 221 (483)
Q Consensus 152 ~GG~~l~~~~~H~v~Dg~g~~~fl~~Wa~~~r-g~~-~-----~~~P~~dr~~l~~~~~p~~~~~~~~~~~~~~~---~~ 221 (483)
|||++||+++||.++||.|+.+|+++||++|| |.. . ...|.+|| .+. +|+ .+......+..... ..
T Consensus 159 cgG~~lg~~~~H~v~Dg~~~~~Fl~awa~~~r~g~~~~~~~~~~~~P~~dr-~l~--~p~-~~~~~~~~~~~~~~~~~~~ 234 (454)
T 2e1v_A 159 NQGIAIGITNHHCLGDASTRFCFLKAWTSIARSGNNDESFLANGTRPLYDR-IIK--YPM-LDEAYLKRAKVESFNEDYV 234 (454)
T ss_dssp TTEEEEEEEECGGGCCHHHHHHHHHHHHHHHHTTSCCHHHHHHSCCCBCCC-CCC--CHH-HHHHHHHHTTCTTHHHHCC
T ss_pred CCcEEEEEEeeeeecchhHHHHHHHHHHHHhccCCCccccCCCCCCCcccc-cCC--CCC-cchHHHHhhhccccccccC
Confidence 99999999999999999999999999999999 863 1 34689999 664 332 21111111110000 00
Q ss_pred CCCCCCCCCCCccccCCceEEEEEeCHHHHHHHHHHhhcCCC--CCCChhHHHHHHHHHHHHHhcCCCCceEEEEEEEeC
Q 011528 222 PPPPPPHNNPQEANCNKLVSRIYYIKSEQLNELQLLATTGSN--GRRTKLESFSAFLWKMVARSANDGMMITKMGIVVDG 299 (483)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~f~f~~~~i~~Lk~~a~~~~~--~~~St~d~l~A~lW~~~~~Ar~~~~~~~~l~~~vd~ 299 (483)
.+. . + ...+++.++|+|++++|++||+++.++.. .++|++|+|+||+|||++||| +++.+.+.++||+
T Consensus 235 ~~~-~----~---~~~~~~~~~f~f~~~~i~~LK~~a~~~~~~~~~~St~d~l~A~lWr~~~~Ar--~~~~~~l~~~vd~ 304 (454)
T 2e1v_A 235 TQS-L----A---GPSDKLRATFILTRAVINQLKDRVLAQLPTLEYVSSFTVACAYIWSCIAKSR--NDKLQLFGFPIDR 304 (454)
T ss_dssp CCC-C----C---CCCCEEEEEEEECHHHHHHHHHHHHHHCTTCSCCCHHHHHHHHHHHHHHHHH--CCSEEEEEEEEEC
T ss_pred ccc-C----C---CCCCceEEEEEECHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHHhhhc--CCCceEEEEEecc
Confidence 000 0 0 13457789999999999999999976432 479999999999999999999 6789999999999
Q ss_pred CCcCCCCCCCCCCCCCCcccccccccCCCcccccccccccccchhhhhc-CcHHHHHHHHHHHHHhcCCh----HHHhh-
Q 011528 300 RTRLSISSNKGDHNNNNVNKSISCMAMGSYFGNVLSIPFGGQNVKELVE-KPLSWVATQVHNFLENAVTK----DHFLG- 373 (483)
Q Consensus 300 R~rl~~~~~lP~~~~~~~~~~~~~~~p~~Y~GN~~~~~~~~~~~~dl~~-~~l~~~A~~Ir~~i~~~~~~----~~~~~- 373 (483)
|+|++|| +| .+||||++..+.+.++++||.+ .+|+++|.+||+++++ +++ +++++
T Consensus 305 R~rl~pp--lP----------------~~Y~GN~~~~~~~~~~~~el~~~~~l~~~a~~Ir~ai~~-~~~~~~~~~~~~~ 365 (454)
T 2e1v_A 305 RARMKPP--IP----------------TAYFGNCVGGCAAIAKTNLLIGKEGFITAAKLIGENLHK-TLTDYKDGVLKDD 365 (454)
T ss_dssp GGGSSSC--CC----------------TTBCSCCEEEEEEEEEGGGTSHHHHHHHHHHHHHHHHHH-HHHHHHTTCCCC-
T ss_pred hhccCCC--CC----------------cccccceeeeEEeecchhhccccccHHHHHHHHHHHHHh-hhhhhhHHHHHHH
Confidence 9999987 55 9999999999998899999985 8999999999999976 664 44444
Q ss_pred HHHHHHhcCCCcccchhccCCCCCCCeEEEecCCCCCCCccccCCCccccCCCCCCCCCCceEEEEcCCCCCCCcEEEEE
Q 011528 374 LIDWVEAHKPDPALAKIYCTPSSDGPAFVVSSGQRFPVSKVDFGWGKPAFGSYHFPWGGDAGYVMPMPSPAGNGDWVVYM 453 (483)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ssw~~~~~y~~DFG~G~P~~~~~~~p~~~~~g~v~i~p~~~~~g~~~v~v 453 (483)
..+|++..+ .. ....++.+|||+++++|++|||||||+++++... ..+|.++++|+++++|+++|.|
T Consensus 366 ~~~~~~~~~------~~-----~~~~~~~vssw~~~~~y~~DFG~G~P~~v~~~~~--~~~g~~~l~p~~~~~ggi~v~v 432 (454)
T 2e1v_A 366 MESFNDLVS------EG-----MPTTMTWVSGTPKLRFYDMDFGWGKPKKLETVSI--DHNGAISINSCKESNEDLEIGV 432 (454)
T ss_dssp ----CHHHH------HC-----CCSEEEEEECCTTSCGGGCCSSSCSCSEEEEGGG--GGSSEEEEEECSSCTTSEEEEE
T ss_pred HHHHHHHHH------hh-----cCCceEEEecCCCCCcccccccCccceEEEeeee--CCCCeEEEEecCCCCCCEEEEE
Confidence 555555321 11 1234789999999999999999999999864221 2457888889888899999999
Q ss_pred EcCHHHHHHHHhcccccc
Q 011528 454 HLSEKQVDLIETQASNVF 471 (483)
Q Consensus 454 ~L~~~~m~~l~~d~~~~~ 471 (483)
+|++++|++|+++..+.+
T Consensus 433 ~L~~~~m~~f~~~~~~~~ 450 (454)
T 2e1v_A 433 CISATQMEDFVHIFDDGL 450 (454)
T ss_dssp EEEHHHHHHHHHHHHHHC
T ss_pred EECHHHHHHHHHHHHHHH
Confidence 999999999998865443
No 5
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=100.00 E-value=7.3e-63 Score=518.59 Aligned_cols=396 Identities=15% Similarity=0.228 Sum_probs=303.9
Q ss_pred cccCCcccCcC--CceeeEEEEEEeCCcccccccCcCCCchhHHHHHHHHHHHHHHhccccccEEEecC-----CCCeEE
Q 011528 27 WLPQSNLDLLL--PAIDVGVFFCYKKPAAAADNINKSFGFGSMVDVLKKAMAEALVSYYALAGEVVYND-----VGEPEL 99 (483)
Q Consensus 27 ~~~LS~lD~~~--~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~-----~g~~~i 99 (483)
.++||.|||+. ++.|+..+|||+.++.. ++.+++++||+||+++|++||||||||+.++ +|+++|
T Consensus 4 ~~~Ls~lD~~~~~~~~y~~~~~~y~~~~~~--------~~~~~~~~Lk~sLs~~L~~~~plAGRl~~~~~~~~~~g~~~i 75 (451)
T 2rkv_A 4 KIQLDTLGQLPGLLSIYTQISLLYPVSDSS--------QYPTIVSTFEQGLKRFSEAVPWVAGQVKAEGISEGNTGTSFI 75 (451)
T ss_dssp CEECCGGGGCTTGGGCEEEEEEEEECSCGG--------GHHHHHHHHHHHHHHHHHHSGGGGCEEEEESCBTTBCCEEEE
T ss_pred cccCChhhcCccccccceeEEEEEECCCCC--------CHHHHHHHHHHHHHHHHHhCCceeEEEEECCCCCCCCCcEEE
Confidence 35899999997 68999999999864321 1457799999999999999999999998864 589999
Q ss_pred EeCCCCeeEEEEeccc-----cccccc-CCCCCchhhc-cc-----CcCc------CCCceEEEEEeEEecCcEEEEeee
Q 011528 100 LCNNRGVDFVEAYANV-----ELKDLN-LYNPDDTIEG-KL-----VAKK------KKNGVLSVQATELKCGGIVVACTF 161 (483)
Q Consensus 100 ~~~~~gv~f~~a~~~~-----~~~dl~-~~~p~~~~~~-~l-----~p~~------~~~pll~vQvt~f~~GG~~l~~~~ 161 (483)
+|++++..|++++++. +++++. ...|...+.. .+ +|.. ...|++.+||| |.|||++||+++
T Consensus 76 ~~~~~~~~~~va~~~~d~~~p~~~~l~~~~~p~~~~~~~~~~p~~~~p~~~~~~~~~~~pll~vQvT-~~~GG~~lg~~~ 154 (451)
T 2rkv_A 76 VPFEDVPRVVVKDLRDDPSAPTIEGMRKAGYPMAMFDENIIAPRKTLPIGPGTGPDDPKPVILLQLN-FIKGGLILTVNG 154 (451)
T ss_dssp ECCCSSCEEEEEECTTCTTSCBHHHHHHHTSCGGGSBHHHHCSSCSSSCSTTCSTTSCCBSEEEEEE-EEBTEEEEEEEE
T ss_pred eecCCCCeEEEEeCCCCCCCCCHHHHHHcCCChhhcCHhhcCCcccCCCCcccCCCCCCceEEEEEE-EecCceeeeeee
Confidence 9887666799888764 566664 2334322211 12 2311 14799999999 669999999999
Q ss_pred ccccchhhhHHHHHHHHHHHHcCCCCCC----CCCcCccccCCC---CCCCCCccccc-ccCCCCCCCCCCCCCCCCCCc
Q 011528 162 DHRIADAYSTDMFLVSWAEIAQSKPISV----MPSFRRSMLNPR---RPLCIDHEFDN-MYVPISTLPPPPPPPHNNPQE 233 (483)
Q Consensus 162 ~H~v~Dg~g~~~fl~~Wa~~~rg~~~~~----~P~~dr~~l~~~---~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 233 (483)
||.++||.|+.+||++||++|||.+.+. .|++||+.+.+. .+|.. .+.+ .|...+.. . . ..
T Consensus 155 ~H~v~Dg~g~~~Fl~awa~~~rg~~~~~~~~~~p~~dr~~~~p~~~~~~p~~--~~~~~~~~~~~~~-----~--~--~~ 223 (451)
T 2rkv_A 155 QHGAMDMVGQDAVIRLLSKACRNDPFTEEEMTAMNLDRKTIVPYLENYTIGP--EVDHQIVKADVAG-----G--D--AV 223 (451)
T ss_dssp ETTTCCHHHHHHHHHHHHHHHHTCCCCHHHHHHTTCCSTTSSCCCTTCCCCG--GGTTCBCCTTSCC-------------
T ss_pred hhccccHHHHHHHHHHHHHHhcCCCCCccccccccCchhhccccccccCCCc--cccccccCCCCCC-----C--C--CC
Confidence 9999999999999999999999976432 478999755442 23321 1111 12111000 0 0 00
Q ss_pred cccCCceEEEEEeCHHHHHHHHHHhhcCC---CCCCChhHHHHHHHHHHHHHhc-C--CCCceEEEEEEEeCCCcCCCCC
Q 011528 234 ANCNKLVSRIYYIKSEQLNELQLLATTGS---NGRRTKLESFSAFLWKMVARSA-N--DGMMITKMGIVVDGRTRLSISS 307 (483)
Q Consensus 234 ~~~~~~~~~~f~f~~~~i~~Lk~~a~~~~---~~~~St~d~l~A~lW~~~~~Ar-~--~~~~~~~l~~~vd~R~rl~~~~ 307 (483)
....+++.++|+|++++|++||+++.++. +.++|++|+|+||+|||++||| . ++++.+.+.++||+|+|++.
T Consensus 224 ~~~~~~~~~~f~f~~~~i~~LK~~a~~~~~~~~~~~St~d~l~A~~Wr~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~l-- 301 (451)
T 2rkv_A 224 LTPVSASWAFFTFSPKAMSELKDAATKTLDASTKFVSTDDALSAFIWKSASRVRLERIDGSAPTEFCRAVDARPAMGV-- 301 (451)
T ss_dssp ---CCEEEEEEEECHHHHHHHHHHHHTTCCTTCSCCCHHHHHHHHHHHHHHHHHTTTSCTTSEEEEEEEEECHHHHTC--
T ss_pred CCCCCceEEEEEECHHHHHHHHHHHhhhccCCCCCccHHHHHHHHHHHHHHHHHhccCCCCCceEEEEEecccccCCC--
Confidence 12356789999999999999999998653 2579999999999999999998 2 46789999999999999973
Q ss_pred CCCCCCCCCcccccccccCCCcccccccccccccchhhhhcCcHHHHHHHHHHHHHhcCChHH-HhhHHHHHHhcCCCcc
Q 011528 308 NKGDHNNNNVNKSISCMAMGSYFGNVLSIPFGGQNVKELVEKPLSWVATQVHNFLENAVTKDH-FLGLIDWVEAHKPDPA 386 (483)
Q Consensus 308 ~lP~~~~~~~~~~~~~~~p~~Y~GN~~~~~~~~~~~~dl~~~~l~~~A~~Ir~~i~~~~~~~~-~~~~~~~~~~~~~~~~ 386 (483)
| .+||||++..+.+.++++||.+.+|+++|.+||+++++ ++.++ +++.++|++..++...
T Consensus 302 --P----------------~~y~GN~~~~~~~~~~~~el~~~~L~~~a~~ir~ai~~-~~~~~~~~~~~~~~~~~~~~~~ 362 (451)
T 2rkv_A 302 --S----------------NNYPGLLQNMTYHNSTIGEIANESLGATASRLRSELDP-ASMRQRTRGLATYLHNNPDKSN 362 (451)
T ss_dssp --C----------------TTCCSCCEEEEEEEEEHHHHHHSCHHHHHHHHHTTCCH-HHHHHHHHHHHHHHHHCSCCTT
T ss_pred --C----------------CCCcccceeeecccCcHHHhccchHHHHHHHHHHHhcc-cCchhHHHHHHHHHhcCCCccc
Confidence 3 89999999999888899999999999999999999976 67777 9999999998765432
Q ss_pred cchhccCCCCCCCeEEEecCCCCCCCccccC--CCccccCCCCCCCCCCceEEEEcCCCCCCCcEEEEEEcCHHHHHHHH
Q 011528 387 LAKIYCTPSSDGPAFVVSSGQRFPVSKVDFG--WGKPAFGSYHFPWGGDAGYVMPMPSPAGNGDWVVYMHLSEKQVDLIE 464 (483)
Q Consensus 387 ~~~~~~~~~~~~~~~~~ssw~~~~~y~~DFG--~G~P~~~~~~~p~~~~~g~v~i~p~~~~~g~~~v~v~L~~~~m~~l~ 464 (483)
+. +......+.++++|||+++++|++||| ||+|++++... ....+|+++++|. +++|+++|.|+|++++|++|+
T Consensus 363 ~~--~~~~~~~~~~~~~ssw~~~~~y~~DFG~gwG~P~~v~~~~-~~~~~g~~~~~p~-~~~ggi~v~v~L~~~~m~~f~ 438 (451)
T 2rkv_A 363 VS--LTADADPSTSVMLSSWAKVGLWDYDFGLGLGKPETVRRPI-FEPVESLMYFMPK-KPDGEFCAALSLRDEDMDRLK 438 (451)
T ss_dssp BC--TTTTCCTTTCEEEEECTTCCGGGCCTTCSSCSCSEEECCB-CSCCTTEEEECCC-CTTSCEEEEEEEEHHHHHHHH
T ss_pred cc--cccccCCCCCEEEeccccCCccccccCCCCCCceEEEcCC-ccCCCCEEEEecC-CCCCCEEEEEEeCHHHHHHHh
Confidence 21 110112345799999999999999998 89999875311 1124688888875 457899999999999999999
Q ss_pred hcc
Q 011528 465 TQA 467 (483)
Q Consensus 465 ~d~ 467 (483)
+|+
T Consensus 439 ~d~ 441 (451)
T 2rkv_A 439 ADK 441 (451)
T ss_dssp HCH
T ss_pred cCH
Confidence 986
No 6
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=99.08 E-value=1.7e-08 Score=103.31 Aligned_cols=260 Identities=14% Similarity=0.070 Sum_probs=144.7
Q ss_pred HHHHHHHHHHHHHhccccccEEEecCCCCeEEEeCCCCee-EEEEecccccccccCCCCCchhhcccCcCcCCCceEEEE
Q 011528 68 VDVLKKAMAEALVSYYALAGEVVYNDVGEPELLCNNRGVD-FVEAYANVELKDLNLYNPDDTIEGKLVAKKKKNGVLSVQ 146 (483)
Q Consensus 68 ~~~L~~sL~~~L~~~p~LaGrl~~~~~g~~~i~~~~~gv~-f~~a~~~~~~~dl~~~~p~~~~~~~l~p~~~~~pll~vQ 146 (483)
.+.|++++.+++.++|.|-.++...+++.+++........ +.+ .|+........+...-.|.....|++++.
T Consensus 36 ~~~l~~A~~~lv~rh~~LRt~f~~~~~~~~q~v~~~~~~~~~~~-------~d~~~~~~~~~~~~~~~~~d~~~pl~r~~ 108 (422)
T 1q9j_A 36 VDALSDAFDALLETHPVLASHLEQSSDGGWNLVADDLLHSGICV-------IDGTAATNGSPSGNAELRLDQSVSLLHLQ 108 (422)
T ss_dssp HHHHHHHHHHHHHHCGGGSEEEEECTTSSEEEEECCSSSCCCEE-------EC------------CCCCCCTTTCSEEEE
T ss_pred HHHHHHHHHHHHHhCccceEEEEecCCcceeeeccCCCCCceEE-------EECCCCCcchhhhcccCccCCCCCcEEEE
Confidence 6899999999999999999999875544344333322222 211 11210000001111112222357899888
Q ss_pred EeEEecCcEEEEeeeccccchhhhHHHHHHHHHHHHc-----CCCCCCCC--CcCc--cccCCCC-----CCCC---Ccc
Q 011528 147 ATELKCGGIVVACTFDHRIADAYSTDMFLVSWAEIAQ-----SKPISVMP--SFRR--SMLNPRR-----PLCI---DHE 209 (483)
Q Consensus 147 vt~f~~GG~~l~~~~~H~v~Dg~g~~~fl~~Wa~~~r-----g~~~~~~P--~~dr--~~l~~~~-----~p~~---~~~ 209 (483)
+.. ..++..|.+.+||.++||.|+..|++.|.+.++ |.+....| ..+. .....+. .+.. ...
T Consensus 109 l~~-~~~~~~l~l~~hH~i~Dg~S~~~l~~~l~~~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (422)
T 1q9j_A 109 LIL-REGGAELTLYLHHCMADGHHGAVLVDELFSRYTDAVTTGDPGPITPQPTPLSMEAVLAQRGIRKQGLSGAERFMSV 187 (422)
T ss_dssp EEC-CSSSCEEEEEEEGGGCCHHHHHHHHHHHHHHHHHHHHSSSCCCCCCCCCCBCHHHHHHHSSCCC-----CTTSSTT
T ss_pred EEe-cCCCeEEEEEeceEEEchhhHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHhcCCcccccchhhhhhhh
Confidence 877 678899999999999999999999999999886 33322112 1111 0000000 0000 012
Q ss_pred cccccCCCCCCCCCCCCCCCCCCccccCCceEEEEEeCHHHHHHHHHHhhcCCCCCCChhHHHHHHHHHHHHHhcCCCCc
Q 011528 210 FDNMYVPISTLPPPPPPPHNNPQEANCNKLVSRIYYIKSEQLNELQLLATTGSNGRRTKLESFSAFLWKMVARSANDGMM 289 (483)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~f~~~~i~~Lk~~a~~~~~~~~St~d~l~A~lW~~~~~Ar~~~~~ 289 (483)
+|.+..+ +....|. ..+. ..........+.++++..++|++.|... .+|.+.++.|.+-..+.+-+..+..
T Consensus 188 ~W~~~l~-~~~~lp~----~~~~-~~~~~~~~~~~~l~~~~~~~l~~~a~~~---~~t~~~~l~aa~~~~l~r~~~~~~~ 258 (422)
T 1q9j_A 188 MYAYEIP-ATETPAV----LAHP-GLPQAVPVTRLWLSKQQTSDLMAFGREH---RLSLNAVVAAAILLTEWQLRNTPHV 258 (422)
T ss_dssp TTCC------------------C-CSBCCCCEEEECCCHHHHHHHHHHHTTT---TCCHHHHHHHHHHHHHHHHHTCSSC
T ss_pred hhcccCC-CcccCCC----CCCC-CCCCCccceEEEeCHHHHHHHHHHHHHh---CCCHHHHHHHHHHHHHHhcccCCCc
Confidence 3333221 0011110 0000 0122235678889999999999999864 5899999988766666544323556
Q ss_pred eEEEEEEEeCCCcCCCCCCCCCCCCCCcccccccccCCCcccccccccccccchhhhhcCcHHHHHHHHHHHHHh
Q 011528 290 ITKMGIVVDGRTRLSISSNKGDHNNNNVNKSISCMAMGSYFGNVLSIPFGGQNVKELVEKPLSWVATQVHNFLEN 364 (483)
Q Consensus 290 ~~~l~~~vd~R~rl~~~~~lP~~~~~~~~~~~~~~~p~~Y~GN~~~~~~~~~~~~dl~~~~l~~~A~~Ir~~i~~ 364 (483)
...+.++++.|.+..++ ++ -+.-.+.+|..+.... .. .+.++.+++..+++.+.+
T Consensus 259 ~v~~g~~~~~R~~~~~~--~~------------~~~~~~~vG~f~n~lp----~~--~~~~~~~~l~~v~~~~~~ 313 (422)
T 1q9j_A 259 PIPYVYPVDLRFVLAPP--VA------------PTEATNLLGAASYLAE----IG--PNTDIVDLASDIVATLRA 313 (422)
T ss_dssp CEEEEEEEETTTTSSSC--CC------------TTTBSCCEEEEEEEEC----CC--SSCCHHHHHHHHHHHHHH
T ss_pred eEEEeeeeecccccCCC--CC------------hhhhhhhheeeeeeee----cc--CCCCHHHHHHHHHHHHHH
Confidence 78899999999886543 11 0011445555442221 11 134567777777777654
No 7
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus}
Probab=98.36 E-value=2.9e-06 Score=88.82 Aligned_cols=253 Identities=13% Similarity=0.041 Sum_probs=142.8
Q ss_pred HHHHHHHHHHHHHhccccccEEEecCCCCeEEEeCCCCeeEEEEecccccccccCCCCC-chh---hcc-c-CcCc-CCC
Q 011528 68 VDVLKKAMAEALVSYYALAGEVVYNDVGEPELLCNNRGVDFVEAYANVELKDLNLYNPD-DTI---EGK-L-VAKK-KKN 140 (483)
Q Consensus 68 ~~~L~~sL~~~L~~~p~LaGrl~~~~~g~~~i~~~~~gv~f~~a~~~~~~~dl~~~~p~-~~~---~~~-l-~p~~-~~~ 140 (483)
.+.|++++.+++.+++.|--++...+ |.+. ......+.+.+. |+...... ..+ ... . -|.. ...
T Consensus 49 ~~~L~~A~~~lv~rh~~LRt~f~~~~-~~~~-~v~~~~~~~~~~-------d~~~~~~~~~~~~~~~~~~~~~~fdl~~~ 119 (493)
T 4hvm_A 49 DDRLAAAADEVLDAFPLLRVNFVDDD-GLWM-RTRENADALVRS-------DLRGHPDPQARCVELLRADRDRPTDPERD 119 (493)
T ss_dssp HHHHHHHHHHHHHHCGGGGEEEEESS-SEEE-EECSCCCCEEEE-------ECTTSSSHHHHHHHHHHHHHSSCCCTTTS
T ss_pred HHHHHHHHHHHHHhchhceeEEEccC-CEEE-EecCCCCCceEE-------ECCCCCchHHHHHHHHHHHhcCCCCCCCC
Confidence 69999999999999999999998644 5554 333322433322 22111110 111 011 1 1222 245
Q ss_pred ceEEEEEeEEecCcEEEEeeeccccchhhhHHHHHHHHHHHHcCCCCCCCCCcCccccCCCC--C---CC--CCcccccc
Q 011528 141 GVLSVQATELKCGGIVVACTFDHRIADAYSTDMFLVSWAEIAQSKPISVMPSFRRSMLNPRR--P---LC--IDHEFDNM 213 (483)
Q Consensus 141 pll~vQvt~f~~GG~~l~~~~~H~v~Dg~g~~~fl~~Wa~~~rg~~~~~~P~~dr~~l~~~~--~---p~--~~~~~~~~ 213 (483)
|++++.+.....+...|.+.+||.++||.|+..|++.+.+.+.|.+.+ .+..|-.... +. . +. ....+|.+
T Consensus 120 pl~r~~l~~~~~~~~~l~l~~HH~i~Dg~S~~~l~~~l~~~Y~g~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~W~~ 197 (493)
T 4hvm_A 120 PLVRLHLVRLSETDVVLGVVAHQMLLDARSRYMVLGAVWQAYYGRFRP-AQYRDFAEVA-DFHPLDRETVRVARHRWWSR 197 (493)
T ss_dssp CSEEEEEEECSSSEEEEEEEEETTTCCHHHHHHHHHHHHHHHTTCCCG-GGSBCGGGTT-TCCTTCSHHHHHHHHHHHHH
T ss_pred CeEEEEEEEECCCcEEEEEecchhhccHHHHHHHHHHHHHHhCCCCCC-cCHHHHHHHH-hhhhcccChhhHHHHHHHHH
Confidence 888888776666678999999999999999999999999999886543 1111111000 01 0 00 00123332
Q ss_pred cC-CCCCCCCCCCCCCCCCCccccCCceEEEEEeCHHHHHHHHHHhhcCCCCCCC--hhHHHHHHHHHHHHHhcC-----
Q 011528 214 YV-PISTLPPPPPPPHNNPQEANCNKLVSRIYYIKSEQLNELQLLATTGSNGRRT--KLESFSAFLWKMVARSAN----- 285 (483)
Q Consensus 214 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~f~~~~i~~Lk~~a~~~~~~~~S--t~d~l~A~lW~~~~~Ar~----- 285 (483)
+. ..+.+ . ..+. .........+.++.+..++|++.|.+. .+| .+.++.|.+-..+.+-+.
T Consensus 198 ~l~~~~~l--~-----~~~~--~~~~~~~~~~~l~~~~~~~l~~~a~~~---~vt~~~~~~l~aa~a~~L~~~~~~~~~~ 265 (493)
T 4hvm_A 198 RLPALPVR--G-----GDGG--PVGPPETSRLRVPGSRWQALTEPGGPL---GGNGSLAMAALTAWWLWTQGAGTGTDTG 265 (493)
T ss_dssp HGGGSCCC--C--------------CCEEEEEEEEHHHHHHHHCC---------CHHHHHHHHHHHHHHHC---------
T ss_pred hccCCCCC--C-----CCCC--CCCCCeeEEEEcCHHHHHHHHHHHHHc---CCCchHHHHHHHHHHHHHHHhhhccccc
Confidence 21 11111 0 0000 111256678899999999999888764 578 888888865554444410
Q ss_pred ----CCCceEEEEEEEeCCCcCCCCCCCCCCCCCCcccccccccCCCcccccccccccccchhhhhcCcHHHHHHHHHHH
Q 011528 286 ----DGMMITKMGIVVDGRTRLSISSNKGDHNNNNVNKSISCMAMGSYFGNVLSIPFGGQNVKELVEKPLSWVATQVHNF 361 (483)
Q Consensus 286 ----~~~~~~~l~~~vd~R~rl~~~~~lP~~~~~~~~~~~~~~~p~~Y~GN~~~~~~~~~~~~dl~~~~l~~~A~~Ir~~ 361 (483)
.......+.++++.|..-+ + .+.+|.++.............+.++.+++..+++.
T Consensus 266 ~~~~~g~~dv~~g~~~~gR~~~~----~-----------------~~~vG~f~n~lplr~~~~~~~~~t~~~~l~~v~~~ 324 (493)
T 4hvm_A 266 AGTGTGKDSLYLSTEVDLRDHLQ----L-----------------GSVVGPLTDRVVFGVDLTGLREPSFRDLMSRTQAG 324 (493)
T ss_dssp -------CEEEEEEEEEHHHHTT----C-----------------CSBCSCCEEEEEEEEECTTCSSCBHHHHHHHHHHH
T ss_pred ccCcCCCCCEEEEeeccCCCCcc----h-----------------hcCeEeeeceeEEEEecCCCcCCCHHHHHHHHHHH
Confidence 3456789999999997622 1 56677766544444433321135788888888877
Q ss_pred HHh
Q 011528 362 LEN 364 (483)
Q Consensus 362 i~~ 364 (483)
+.+
T Consensus 325 ~~~ 327 (493)
T 4hvm_A 325 FLD 327 (493)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 8
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2
Probab=98.32 E-value=5e-06 Score=85.28 Aligned_cols=249 Identities=12% Similarity=0.053 Sum_probs=142.2
Q ss_pred HHHHHHHHHHHHHhccccccEEEecCCCCeEEEeCCCCeeEEEEecccccccccCCCCC--chhh----ccc-CcCc-CC
Q 011528 68 VDVLKKAMAEALVSYYALAGEVVYNDVGEPELLCNNRGVDFVEAYANVELKDLNLYNPD--DTIE----GKL-VAKK-KK 139 (483)
Q Consensus 68 ~~~L~~sL~~~L~~~p~LaGrl~~~~~g~~~i~~~~~gv~f~~a~~~~~~~dl~~~~p~--~~~~----~~l-~p~~-~~ 139 (483)
.+.|++++.+++.+++.|--++... +| .+. ....+.+. +.|+.. .++ ..+. ... -|.. ..
T Consensus 35 ~~~L~~A~~~lv~rh~~LRt~f~~~-~~--~v~-~~~~~~~~-------~~d~~~-~~~~~~~~~~~~~~~~~~~fdl~~ 102 (436)
T 1l5a_A 35 TTLLLRALHLTVSEIDLFRARFSAQ-GE--LYW-HPFSPPID-------YQDLSI-HLEAEPLAWRQIEQDLQRSSTLID 102 (436)
T ss_dssp HHHHHHHHHHHHHTCGGGGEEECTT-CC--EEE-CSSCCCCE-------EEECTT-CTTHHHHHHHHHHHHHTSCCCCBT
T ss_pred HHHHHHHHHHHHHHhheeEEEEEec-CC--eEC-CCcCCCcc-------EEeCCC-CCCHHHHHHHHHHHHhcCCCCcCC
Confidence 6899999999999999999998753 34 222 21112221 122211 111 0110 111 1221 24
Q ss_pred CceEEEEEeEEecCcEEEEeeeccccchhhhHHHHHHHHHHHHc----CCCCCCC-CCcC------ccccCCCCCCCCCc
Q 011528 140 NGVLSVQATELKCGGIVVACTFDHRIADAYSTDMFLVSWAEIAQ----SKPISVM-PSFR------RSMLNPRRPLCIDH 208 (483)
Q Consensus 140 ~pll~vQvt~f~~GG~~l~~~~~H~v~Dg~g~~~fl~~Wa~~~r----g~~~~~~-P~~d------r~~l~~~~~p~~~~ 208 (483)
.|++++.+.+...+...|.+.+||.++||.|+..|++.+.+.++ |.+.... +.+. +..+..... ....
T Consensus 103 ~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~~~l~~~Y~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 181 (436)
T 1l5a_A 103 APITSHQVYRLSHSEHLIYTRAHHIVLDGYGMMLFEQRLSQHYQSLLSGQTPTAAFKPYQSYLEEEAAYLTSHRY-WQDK 181 (436)
T ss_dssp SCSCEEEEEEEETTEEEEEEEEETTTCCHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCHHHHHHHHHHHHTSHHH-HHHH
T ss_pred CCCeEEEEEEEcCCEEEEEEeehhheecHhHHHHHHHHHHHHHHHHhcCCCCCCCccCHHHHHHHHHHhhccHhH-HHHH
Confidence 68888877767677899999999999999999999999999887 5443221 1111 001110000 0001
Q ss_pred ccccccC-CCCC-CCCCCCCCCCCCCccccCCceEEEEEeCHHHHHHHHHHhhcCCCCCCChhHHHHHHHHHHHHHhcCC
Q 011528 209 EFDNMYV-PIST-LPPPPPPPHNNPQEANCNKLVSRIYYIKSEQLNELQLLATTGSNGRRTKLESFSAFLWKMVARSAND 286 (483)
Q Consensus 209 ~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~f~f~~~~i~~Lk~~a~~~~~~~~St~d~l~A~lW~~~~~Ar~~ 286 (483)
.+|.++. ..+. ...|. .............+.++++..++|++.|... .+|.+.++.|.+-..+.+- .
T Consensus 182 ~~W~~~l~~~~~~~~lp~------~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~~---~~t~~~~l~aa~~~~L~~~--~ 250 (436)
T 1l5a_A 182 QFWQGYLREAPDLTLTSA------TYDPQLSHAVSLSYTLNSQLNHLLLKLANAN---QIGWPDALVALCALYLESA--E 250 (436)
T ss_dssp HHHHHHHHTSCCCCBCCT------TCCGGGCCEEEEEEECCHHHHHHHHHHHHHT---TCCHHHHHHHHHHHHHHHH--S
T ss_pred HHHHHHhcCCCCcccCCC------CCCCCcccceeeEEecCHHHHHHHHHHHHHh---CCCHHHHHHHHHHHHHHHh--h
Confidence 1232221 1100 00010 0001122345678899999999999999875 5889999888654444433 2
Q ss_pred CCceEEEEEEEeCCCcCCCCCCCCCCCCCCcccccccccCCCcccccccccccccchhhhhcCcHHHHHHHHHHHHHh
Q 011528 287 GMMITKMGIVVDGRTRLSISSNKGDHNNNNVNKSISCMAMGSYFGNVLSIPFGGQNVKELVEKPLSWVATQVHNFLEN 364 (483)
Q Consensus 287 ~~~~~~l~~~vd~R~rl~~~~~lP~~~~~~~~~~~~~~~p~~Y~GN~~~~~~~~~~~~dl~~~~l~~~A~~Ir~~i~~ 364 (483)
+ +...++++++.|..-+ ..+-+|+++........... +.++.+++..+++.+.+
T Consensus 251 g-~dv~ig~~~~~R~~~~---------------------~~~~vG~f~n~lplr~~~~~--~~t~~~~l~~v~~~~~~ 304 (436)
T 1l5a_A 251 P-DAPWLWLPFMNRWGSV---------------------AANVPGLMVNSLPLLRLSAQ--QTSLGNYLKQSGQAIRS 304 (436)
T ss_dssp T-TCCEEEEEECCCTTSG---------------------GGGSCSCCCEEEEEECCCCT--TCBHHHHHHHHHHHHHH
T ss_pred C-CceEEeeecccCCChH---------------------HhcCcceEEEEEEEEEecCC--CCCHHHHHHHHHHHHHH
Confidence 4 6788999999997522 14555665543333333221 34677777777777654
No 9
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=98.29 E-value=2.6e-05 Score=82.08 Aligned_cols=256 Identities=13% Similarity=0.129 Sum_probs=144.7
Q ss_pred HHHHHHHHHHHHHhccccccEEEecCCCCe-EEEeCCCCeeEEEEecccccccccCCCCCchhhccc-CcCc-CCCceEE
Q 011528 68 VDVLKKAMAEALVSYYALAGEVVYNDVGEP-ELLCNNRGVDFVEAYANVELKDLNLYNPDDTIEGKL-VAKK-KKNGVLS 144 (483)
Q Consensus 68 ~~~L~~sL~~~L~~~p~LaGrl~~~~~g~~-~i~~~~~gv~f~~a~~~~~~~dl~~~~p~~~~~~~l-~p~~-~~~pll~ 144 (483)
.+.|++++.+++.+++.|--++...+ |.+ ++......+.+...+. +-+++. .+...+ -|.. ...|+++
T Consensus 133 ~~~l~~A~~~lv~rh~~LRt~f~~~~-~~~~q~v~~~~~~~~~~~~~--~~~~~~------~~~~~~~~~fdl~~~pl~r 203 (520)
T 2jgp_A 133 RTRVEAAFQRLIARHESLRTSFAVVN-GEPVQNIHEDVPFALAYSEV--TEEEAR------ELVSSLVQPFDLEVAPLIR 203 (520)
T ss_dssp HHHHHHHHHHHHHHCGGGGEEEEEET-TEEEEEECSCCCCCCEEEEC--CHHHHH------HHHHHTCCCCCTTSSCCEE
T ss_pred HHHHHHHHHHHHHHhHhheeEEEeeC-CEEEEEECCCCCCceEEEeC--CHHHHH------HHHHHhcCCCCCCCCccee
Confidence 68999999999999999999997644 443 2222222222211111 101110 011111 1211 2468888
Q ss_pred EEEeEEecCcEEEEeeeccccchhhhHHHHHHHHHHHHcCCCCCCCC-Cc-C-----ccccCCCCCCCCCcccccccCC-
Q 011528 145 VQATELKCGGIVVACTFDHRIADAYSTDMFLVSWAEIAQSKPISVMP-SF-R-----RSMLNPRRPLCIDHEFDNMYVP- 216 (483)
Q Consensus 145 vQvt~f~~GG~~l~~~~~H~v~Dg~g~~~fl~~Wa~~~rg~~~~~~P-~~-d-----r~~l~~~~~p~~~~~~~~~~~~- 216 (483)
+.+.+...+...|.+.+||.++||.|+..|++.+.+.+++.+.+..| .+ | +....... ......+|.++..
T Consensus 204 ~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~~el~~~Y~~~~l~~~~~~~~d~~~~~~~~~~~~~-~~~~~~yW~~~l~~ 282 (520)
T 2jgp_A 204 VSLLKIGEDRYVLFTDMHHSISDGVSSGILLAEWVQLYQGDVLPELRIQYKDFAVWQQEFSQSAA-FHKQEAYWLQTFAD 282 (520)
T ss_dssp EEEEEEETTEEEEEEEEBGGGCCHHHHHHHHHHHHHHHTTCCCCCCSCCHHHHHHHHHHHTTSHH-HHHHHHHHHHHTSS
T ss_pred EEEEEEcCCcEEEEEEccceeecHhHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcChh-hHHHHHHHHHHhCC
Confidence 87776766779999999999999999999999999999986433222 11 1 11110000 0000112322111
Q ss_pred CC-CCCCCCCCCCCCCCccccCCceEEEEEeCHHHHHHHHHHhhcCCCCCCChhHHHHHHHHHHHHHhcCCCCceEEEEE
Q 011528 217 IS-TLPPPPPPPHNNPQEANCNKLVSRIYYIKSEQLNELQLLATTGSNGRRTKLESFSAFLWKMVARSANDGMMITKMGI 295 (483)
Q Consensus 217 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~f~f~~~~i~~Lk~~a~~~~~~~~St~d~l~A~lW~~~~~Ar~~~~~~~~l~~ 295 (483)
.+ ....|... ..+. ..........+.++++..++|++.|... .+|.+.++.|.+-..+.+-. ..+...+++
T Consensus 283 ~~~~~~lp~~~--~~~~-~~~~~~~~~~~~l~~~~~~~l~~~a~~~---~~T~~~~l~aa~a~~L~~~~--~~~dv~~g~ 354 (520)
T 2jgp_A 283 DIPVLNLPTDF--TRPS-TQSFAGDQCTIGAGKALTEGLHQLAQAT---GTTLYMVLLAAYNVLLAKYA--GQEDIIVGT 354 (520)
T ss_dssp CCCCCCCCCSS--CCCS-SCCCBEEEEEEECCHHHHHHHHHHHHHH---TCCHHHHHHHHHHHHHHHHH--TCSCEEEEE
T ss_pred CCCcCCCCCCC--CCCC-CCCCCccEEEEeCCHHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHHhc--CCCCeEEEe
Confidence 00 00011000 0010 0122345677899999999999998764 57889998876544444433 345688999
Q ss_pred EEeCCCcCCCCCCCCCCCCCCcccccccccCCCcccccccccccccchhhhhcCcHHHHHHHHHHHHHh
Q 011528 296 VVDGRTRLSISSNKGDHNNNNVNKSISCMAMGSYFGNVLSIPFGGQNVKELVEKPLSWVATQVHNFLEN 364 (483)
Q Consensus 296 ~vd~R~rl~~~~~lP~~~~~~~~~~~~~~~p~~Y~GN~~~~~~~~~~~~dl~~~~l~~~A~~Ir~~i~~ 364 (483)
+++.|..-+. .+-+|+++........... +.++.+++..+++.+.+
T Consensus 355 ~~~gR~~~~~---------------------~~~vG~f~n~lplr~~~~~--~~~~~~~l~~v~~~~~~ 400 (520)
T 2jgp_A 355 PITGRSHADL---------------------EPIVGMFVNTLAMRNKPQR--EKTFSEFLQEVKQNALD 400 (520)
T ss_dssp EECCCCSGGG---------------------TTCCSCCCEEEEEEECCCT--TSBHHHHHHHHHHHHHH
T ss_pred ccCCCCchhh---------------------hccEEeeeeeeeEEecCCC--CCCHHHHHHHHHHHHHH
Confidence 9999976221 4566666544333333221 34677777777776644
No 10
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis}
Probab=98.04 E-value=0.00013 Score=75.22 Aligned_cols=261 Identities=13% Similarity=0.069 Sum_probs=142.4
Q ss_pred HHHHHHHHHHHHHhccccccEEEecCCCCe-EEEeCC--CCeeEEEEecccccccccCC-CCCch---hhccc-CcCc-C
Q 011528 68 VDVLKKAMAEALVSYYALAGEVVYNDVGEP-ELLCNN--RGVDFVEAYANVELKDLNLY-NPDDT---IEGKL-VAKK-K 138 (483)
Q Consensus 68 ~~~L~~sL~~~L~~~p~LaGrl~~~~~g~~-~i~~~~--~gv~f~~a~~~~~~~dl~~~-~p~~~---~~~~l-~p~~-~ 138 (483)
.+.|+++|.+++.+.+.|--++...+ |.+ ++.... ..+.+.+. |+... ..... +...+ -|.. .
T Consensus 52 ~~~L~~Al~~lv~rh~~LRt~f~~~~-~~~~q~v~~~~~~~~~~~~~-------d~~~~~~~~~~~~~~~~~~~~~fdl~ 123 (466)
T 2xhg_A 52 PKVIQSVMDKIIEHHDALRMVYQHEN-GNVVQHNRGLGGQLYDFFSY-------NLTAQPDVQQAIEAETQRLHSSMNLQ 123 (466)
T ss_dssp HHHHHHHHHHHHHHSGGGGEEEECGG-GCCEEEECCSSSCCCEEEEE-------ECTTCSCHHHHHHHHHHHHHTTCCTT
T ss_pred HHHHHHHHHHHHHhChHhheEEecCC-CceeeeccccccccceeEEE-------ecCCcccHHHHHHHHHHHHHhccCCC
Confidence 68999999999999999999998654 433 322221 22222221 22100 00000 00111 1221 2
Q ss_pred CCceEEEEEeEEecCcEEEEeeeccccchhhhHHHHHHHHHHHHc----CCCCCCCC--C-c-C-----ccccCCCCCCC
Q 011528 139 KNGVLSVQATELKCGGIVVACTFDHRIADAYSTDMFLVSWAEIAQ----SKPISVMP--S-F-R-----RSMLNPRRPLC 205 (483)
Q Consensus 139 ~~pll~vQvt~f~~GG~~l~~~~~H~v~Dg~g~~~fl~~Wa~~~r----g~~~~~~P--~-~-d-----r~~l~~~~~p~ 205 (483)
..|++++.+.+... +-.|-+.+||.++||.|+..|++.+.+.++ |.+....| . + | +..+.... ..
T Consensus 124 ~~pl~r~~l~~~~~-~~~l~l~~HH~i~Dg~S~~~l~~el~~~Y~~~~~g~~~~l~~~~~~y~~~~~~~~~~~~~~~-~~ 201 (466)
T 2xhg_A 124 EGPLVKVALFQTLH-GDHLFLAIHHLVVDGISWRILFEDLATGYAQALAGQAISLPEKTDSFQSWSQWLQEYANEAD-LL 201 (466)
T ss_dssp TCCCEEEEEEEETT-EEEEEEEEEGGGCCHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCSCHHHHHHHHHHHTTSHH-HH
T ss_pred CCCeEEEEEEEcCC-CCEEEEEeeeeeechhhHHHHHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHHHhcCcc-ch
Confidence 46888888776654 444679999999999999999999998875 44322111 1 1 1 00011000 00
Q ss_pred CCcccccccC-CCCCCCCCCCCCCCCCCccccCCceEEEEEeCHHHHHHHHHHhhcCCCCCCChhHHHHHHHHHHHHHhc
Q 011528 206 IDHEFDNMYV-PISTLPPPPPPPHNNPQEANCNKLVSRIYYIKSEQLNELQLLATTGSNGRRTKLESFSAFLWKMVARSA 284 (483)
Q Consensus 206 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~f~~~~i~~Lk~~a~~~~~~~~St~d~l~A~lW~~~~~Ar 284 (483)
....+|.++. ..+....|... ..+. ..........+.++++..++|++.+... ..+|.++++.|.+-..+.+-.
T Consensus 202 ~~~~~W~~~l~~~~~~~lp~~~--~~~~-~~~~~~~~~~~~l~~~~~~~l~~~~~~~--~~~t~~~~llaa~~~~l~~~~ 276 (466)
T 2xhg_A 202 SEIPYWESLESQAKNVSLPKDY--EVTD-CKQKSVRNMRIRLHPEETEQLLKHANQA--YQTEINDLLLAALGLAFAEWS 276 (466)
T ss_dssp TTHHHHHHHHHHCCCCCCCCSS--CCSS-CBGGGEEEEEEECCHHHHHHHHHTGGGT--TTCCHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHhhccCCcccCCccc--cccc-cccccceEEEEEcCHHHHHHHHHHhHHh--hCCCHHHHHHHHHHHHHHHHh
Confidence 0111232211 00100111100 0000 0122345677899999999999887543 257889998887555555443
Q ss_pred CCCCceEEEEEEEeCCCcCCCCCCCCCCCCCCcccccccccCCCcccccccccccccchhhhhcCcHHHHHHHHHHHHHh
Q 011528 285 NDGMMITKMGIVVDGRTRLSISSNKGDHNNNNVNKSISCMAMGSYFGNVLSIPFGGQNVKELVEKPLSWVATQVHNFLEN 364 (483)
Q Consensus 285 ~~~~~~~~l~~~vd~R~rl~~~~~lP~~~~~~~~~~~~~~~p~~Y~GN~~~~~~~~~~~~dl~~~~l~~~A~~Ir~~i~~ 364 (483)
......+.++++.|....+. + ...+-+|+.+........... +.++.+++..+++.+.+
T Consensus 277 --~~~dv~ig~~~~gR~~~~~~---~--------------~~~~~vG~f~n~lplr~~~~~--~~~~~~~l~~v~~~~~~ 335 (466)
T 2xhg_A 277 --KLAQIVIHLEGHGREDIIEQ---A--------------NVARTVGWFTSQYPVLLDLKQ--TAPLSDYIKLTKENMRK 335 (466)
T ss_dssp --CCSEEEEEEEECCCCSCSTT---C--------------CCTTCCSCCCEEEEEEEECSC--CCSHHHHHHHHHHHHHH
T ss_pred --CCCceEEEecCCCCCccccC---C--------------CccccccceeeeccEEEecCC--CCCHHHHHHHHHHHHHh
Confidence 34568899999999764210 0 114556665544333333221 35788888999888865
No 11
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=98.04 E-value=3.4e-05 Score=90.51 Aligned_cols=260 Identities=12% Similarity=0.126 Sum_probs=145.3
Q ss_pred HHHHHHHHHHHHHhccccccEEEecCCCC-eEEEeCCCCeeEEEEecccccccccCCCCCc----hh---hcc-c-CcCc
Q 011528 68 VDVLKKAMAEALVSYYALAGEVVYNDVGE-PELLCNNRGVDFVEAYANVELKDLNLYNPDD----TI---EGK-L-VAKK 137 (483)
Q Consensus 68 ~~~L~~sL~~~L~~~p~LaGrl~~~~~g~-~~i~~~~~gv~f~~a~~~~~~~dl~~~~p~~----~~---~~~-l-~p~~ 137 (483)
.+.|++++.+++.+++.|--++...+.|. .++......+.+.+ .|+.. .+.. .+ ... . -|..
T Consensus 49 ~~~l~~A~~~lv~rH~~LRt~f~~~~~~~p~Q~v~~~~~~~~~~-------~d~~~-~~~~~~~~~~~~~~~~~~~~~fd 120 (1304)
T 2vsq_A 49 IKCLEESMNVIMDRYDVFRTVFIHEKVKRPVQVVLKKRQFHIEE-------IDLTH-LTGSEQTAKINEYKEQDKIRGFD 120 (1304)
T ss_dssp HHHHHHHHHHHHHHCGGGGEEEECSSCSSCEEEEESCCCCCEEE-------EECTT-SCHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHhhhhceEEEEEcCCCeEEEEECCCCCCceEE-------EECCC-CCchhHHHHHHHHHHHHhcCCCC
Confidence 68999999999999999999987654332 33333332222221 22211 1110 01 011 1 1222
Q ss_pred -CCCceEEEEEeEEecCcEEEEeeeccccchhhhHHHHHHHHHHHHc----CCCCCCCC--Cc-Ccc-ccCCCCCCCCCc
Q 011528 138 -KKNGVLSVQATELKCGGIVVACTFDHRIADAYSTDMFLVSWAEIAQ----SKPISVMP--SF-RRS-MLNPRRPLCIDH 208 (483)
Q Consensus 138 -~~~pll~vQvt~f~~GG~~l~~~~~H~v~Dg~g~~~fl~~Wa~~~r----g~~~~~~P--~~-dr~-~l~~~~~p~~~~ 208 (483)
...|++++.+.+...+...+-+.+||.++||.|+..|++.+.++++ |.+....| .+ |.. .+...+. ....
T Consensus 121 l~~~pl~r~~l~~~~~~~~~l~~~~HHii~DG~S~~~l~~el~~~Y~~~~~g~~~~l~~~~~y~d~~~~~~~~~~-~~~~ 199 (1304)
T 2vsq_A 121 LTRDIPMRAAIFKKAEESFEWVWSYHHIILDGWCFGIVVQDLFKVYNALREQKPYSLPPVKPYKDYIKWLEKQDK-QASL 199 (1304)
T ss_dssp TTTSCSEEEEEEEEETTEEEEEEEEEGGGCCHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCTHHHHHHHHTSCH-HHHH
T ss_pred CCCCCcEEEEEEEECCCcEEEEEecCceeechhhHHHHHHHHHHHHHHhhcCCCCCCCCcccHHHHHHHHhcchh-hHHH
Confidence 2468998888877777899999999999999999999999999876 33322111 11 100 0110000 0001
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCccccCCceEEEEEeCHHHHHHHHHHhhcCCCCCCChhHHHHHHHHHHHHHhcCCCC
Q 011528 209 EFDNMYVPISTLPPPPPPPHNNPQEANCNKLVSRIYYIKSEQLNELQLLATTGSNGRRTKLESFSAFLWKMVARSANDGM 288 (483)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~f~~~~i~~Lk~~a~~~~~~~~St~d~l~A~lW~~~~~Ar~~~~ 288 (483)
.+|.++.. ..+.+....................+.++++..++|++.|.+. .+|.+.+|.|.+-..+.|- ...
T Consensus 200 ~yW~~~L~--~~~~~~~lp~~~~~~~~~~~~~~~~~~l~~~~~~~L~~~a~~~---~~T~~~vllaa~a~~L~r~--tg~ 272 (1304)
T 2vsq_A 200 RYWREYLE--GFEGQTTFAEQRKKQKDGYEPKELLFSPSEAETKAFTELAKSQ---HTTLSTALQAVWSVLISRY--QQS 272 (1304)
T ss_dssp HHHHHHHT--TCCCCCTTTTTCCCSSCCCCEEEEEECCCHHHHHHHHHHHHHT---TCCHHHHHHHHHHHHHHHH--HTC
T ss_pred HHHHHHhC--CCCccccCCCCCCccccccCcceEEEecCHHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHHh--cCC
Confidence 12322211 0110000000000000122335567889999999999999875 5788998887543333333 244
Q ss_pred ceEEEEEEEeCCCcCCCCCCCCCCCCCCcccccccccCCCcccccccccccccchhhhhcCcHHHHHHHHHHHHHh
Q 011528 289 MITKMGIVVDGRTRLSISSNKGDHNNNNVNKSISCMAMGSYFGNVLSIPFGGQNVKELVEKPLSWVATQVHNFLEN 364 (483)
Q Consensus 289 ~~~~l~~~vd~R~rl~~~~~lP~~~~~~~~~~~~~~~p~~Y~GN~~~~~~~~~~~~dl~~~~l~~~A~~Ir~~i~~ 364 (483)
+...++.+++.|.+..+. + ++.+|..+........... +.++.++...+++...+
T Consensus 273 ~dvv~G~pvsgR~~~~~~--~-----------------~~~vG~fvntlplr~~~~~--~~s~~~ll~~v~~~~~~ 327 (1304)
T 2vsq_A 273 GDLAFGTVVSGRPAEIKG--V-----------------EHMVGLFINVVPRRVKLSE--GITFNGLLKRLQEQSLQ 327 (1304)
T ss_dssp SEEEEEEEECCCCTTSTT--G-----------------GGCCSSCCEEEEEEEECCT--TCBHHHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCCCccchh--h-----------------hcccccceeEEEEEecCCC--CCcHHHHHHHHHHHHHH
Confidence 578999999999763221 1 4445555443333332221 35788888888877654
No 12
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A*
Probab=97.60 E-value=0.0019 Score=68.03 Aligned_cols=232 Identities=13% Similarity=0.023 Sum_probs=118.0
Q ss_pred chhHHHHHHHHHHHHHHhccccccEEEecCCCCeEEEeCC-CCe---------eEEEEecccccccccCCCCCchh-hcc
Q 011528 64 FGSMVDVLKKAMAEALVSYYALAGEVVYNDVGEPELLCNN-RGV---------DFVEAYANVELKDLNLYNPDDTI-EGK 132 (483)
Q Consensus 64 ~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~~g~~~i~~~~-~gv---------~f~~a~~~~~~~dl~~~~p~~~~-~~~ 132 (483)
..++.+.||+|.-.+--++|-+|+++..++.+.....+.- ... -|.+...+.+-+|+....-.... ...
T Consensus 71 ~~~l~~~lr~AW~~lR~~hP~iA~~v~~d~~~~~~~~Y~~~~~~~~~~~Wl~~Tf~v~~~~~t~~e~~~~~~~~r~~~~~ 150 (519)
T 3fot_A 71 LQNLKEMFELALLDARFEHPECACTVSWDDEVPAIITYESPESNESARDWARGCIHVQPTAKSALDLWSEMEEGRAAAND 150 (519)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGGCEEECCSSSSCEEEEECCSSHHHHHHHHHHHEEEEECSCCHHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHHHHhhCCcceeEEeeCCCCcccEEEecCCCHHHHHHHHHhcEEEeCCCCCHHHHHHhhhhhhccccc
Confidence 3577888999998888889999999987643333333321 010 12222222222222000000000 000
Q ss_pred cCcCcCCCceEEEEEeE------EecC--cEEEEeeeccccchhhhHHHHHHHHHHHHcCC---CC-CCCCCcC----cc
Q 011528 133 LVAKKKKNGVLSVQATE------LKCG--GIVVACTFDHRIADAYSTDMFLVSWAEIAQSK---PI-SVMPSFR----RS 196 (483)
Q Consensus 133 l~p~~~~~pll~vQvt~------f~~G--G~~l~~~~~H~v~Dg~g~~~fl~~Wa~~~rg~---~~-~~~P~~d----r~ 196 (483)
..|. ..+-+-+=... + .+ -.-|.+.+||.++||.|...|++.+-+.+... .. ...|.++ -.
T Consensus 151 ~~p~--~~~~l~~v~~~~~~~~~~-p~~~~~~lv~~~~H~~~DG~g~~~f~~~ll~~L~~~~~~~~~~~~~~~~~g~E~~ 227 (519)
T 3fot_A 151 NTPS--KSIELFLLSDVSTDSTPI-PQDATVEILFHSNHLFWDGIGCRKFVGDLFRLVGSYIGRSDSREMKKIQWGQEIK 227 (519)
T ss_dssp CCCC--CSCEEEEEESSSSTTSCC-CTTCEEEEEEEECGGGCCHHHHHHHHHHHHHHHTTSTTC-CGGGSCCCCTTTTGG
T ss_pred CCCc--cceEEEEEeccccccccC-CCCceEEEEEEeCceeEchHhHHHHHHHHHHHHHhhhccCCccCCCcCCCCcccc
Confidence 1111 01111110000 1 13 36778889999999999999999998877631 11 1123332 11
Q ss_pred ccCCC------CCCC-CCccc---ccccC-----CCCCCCCCCCCCCCCCCccccCCceEEEEEeCHHHHHHHHHHhhcC
Q 011528 197 MLNPR------RPLC-IDHEF---DNMYV-----PISTLPPPPPPPHNNPQEANCNKLVSRIYYIKSEQLNELQLLATTG 261 (483)
Q Consensus 197 ~l~~~------~~p~-~~~~~---~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~f~~~~i~~Lk~~a~~~ 261 (483)
.|.+. .|.. ..++. ..++. .......|.. + ....-....+.|+++..++|++.|.+.
T Consensus 228 ~L~P~~e~~~~~p~~~~~~e~~~~~~~~~~~~~~~~~~~~~P~~-----~---~~~~~~~~~~~ls~~~t~~L~~~ck~~ 299 (519)
T 3fot_A 228 NLSPPVVDSLKLDINTLGSEFDDKCTEYTSALVANYKSRGMKFQ-----P---GLALPRCVIHKLSADESIDIVKAVKTR 299 (519)
T ss_dssp GSCCCTGGGBSSCGGGCCHHHHHHHHHHHHHHHHHHHSCCSBCC-----C---CCCCEEEEEEECCHHHHHHHHHHHHHH
T ss_pred cCCcCHHHHhCCCCCCCCHHHHHHHHHHHHHhhcCCCcccCCCC-----C---CCCCcceEEEEcCHHHHHHHHHHHHhc
Confidence 12110 0100 00100 00010 0000011100 0 112223467889999999999999986
Q ss_pred CCCCCChhHHHHHHHHHHHHHhcC----CCCceEEEEEEEeCCCcCCCC
Q 011528 262 SNGRRTKLESFSAFLWKMVARSAN----DGMMITKMGIVVDGRTRLSIS 306 (483)
Q Consensus 262 ~~~~~St~d~l~A~lW~~~~~Ar~----~~~~~~~l~~~vd~R~rl~~~ 306 (483)
.+..+|-..+|.|.+-.++.+... .......+.++||+|+++.++
T Consensus 300 ~~~g~Tvt~~l~Aa~~~al~~~~~~~~~~~~~~~~~~~pvnlR~~l~~~ 348 (519)
T 3fot_A 300 LGPGFTISHLTQAAIVLALLDHLKPNDLSDDEVFISPTSVDGRRWLRED 348 (519)
T ss_dssp TCTTCCHHHHHHHHHHHHHHHHC----CCTTCCEEEEEEEECGGGBCHH
T ss_pred CCCCeeHHHHHHHHHHHHHHhhcCCcccCCCccEEEEeeeeccccCCCc
Confidence 434688899997766666665321 123357899999999998653
No 13
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A*
Probab=74.43 E-value=2.3 Score=38.92 Aligned_cols=44 Identities=9% Similarity=0.294 Sum_probs=32.6
Q ss_pred CceEEEEEeEEecCc--EEEEeeeccccchhhhHHHHHHHHHHHHc
Q 011528 140 NGVLSVQATELKCGG--IVVACTFDHRIADAYSTDMFLVSWAEIAQ 183 (483)
Q Consensus 140 ~pll~vQvt~f~~GG--~~l~~~~~H~v~Dg~g~~~fl~~Wa~~~r 183 (483)
.|++.+--..=..|. +-|++++||.+.||.-+..|++.+.+.+.
T Consensus 164 ~PIi~~G~~~~~~~~~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le 209 (213)
T 3cla_A 164 APIITMAKYQQEGDRLLLPLSVQVHHAVCDGFHVARFINRLQELCN 209 (213)
T ss_dssp SCEEEEECCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHT
T ss_pred ccEEEeeEEEEECCeEEEEEEEEEcccccChHHHHHHHHHHHHHHH
Confidence 477654322112232 78999999999999999999999998764
No 14
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron}
Probab=73.23 E-value=2.5 Score=38.75 Aligned_cols=28 Identities=18% Similarity=0.293 Sum_probs=25.9
Q ss_pred EEEEeeeccccchhhhHHHHHHHHHHHH
Q 011528 155 IVVACTFDHRIADAYSTDMFLVSWAEIA 182 (483)
Q Consensus 155 ~~l~~~~~H~v~Dg~g~~~fl~~Wa~~~ 182 (483)
+-|++++||.+.||.-+..|++.+.+.+
T Consensus 189 m~lsls~DHRvvDG~~aa~Fl~~lk~~l 216 (217)
T 2i9d_A 189 MPIAMTIHHGFIDGHHLSLFYKKVEDFL 216 (217)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHH
T ss_pred EEEEEEecchhhChHHHHHHHHHHHHHh
Confidence 7899999999999999999999998764
No 15
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A*
Probab=72.94 E-value=2.6 Score=38.73 Aligned_cols=29 Identities=14% Similarity=0.311 Sum_probs=26.9
Q ss_pred EEEEeeeccccchhhhHHHHHHHHHHHHc
Q 011528 155 IVVACTFDHRIADAYSTDMFLVSWAEIAQ 183 (483)
Q Consensus 155 ~~l~~~~~H~v~Dg~g~~~fl~~Wa~~~r 183 (483)
+-|++++||.+.||.-+..|++.+.+.+.
T Consensus 185 m~lsls~DHRvvDG~~aa~Fl~~lk~~le 213 (219)
T 1q23_A 185 MPLAIQVHHAVCDGFHVGRMLNELQQYCD 213 (219)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEEchhhChHHHHHHHHHHHHHHh
Confidence 78999999999999999999999998764
No 16
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens}
Probab=70.48 E-value=3 Score=38.86 Aligned_cols=29 Identities=21% Similarity=0.401 Sum_probs=27.3
Q ss_pred EEEEeeeccccchhhhHHHHHHHHHHHHc
Q 011528 155 IVVACTFDHRIADAYSTDMFLVSWAEIAQ 183 (483)
Q Consensus 155 ~~l~~~~~H~v~Dg~g~~~fl~~Wa~~~r 183 (483)
+-|+++++|.+.||.-+..|++.+.+.+.
T Consensus 204 m~lsls~DHRviDGa~aa~Fl~~lk~~le 232 (239)
T 3b8k_A 204 MSVTLSCDHRVVDGAVGAQWLAEFRKYLE 232 (239)
T ss_dssp EEEEECCCCCSSCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHh
Confidence 88999999999999999999999998775
No 17
>1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A
Probab=70.13 E-value=3.2 Score=38.46 Aligned_cols=30 Identities=30% Similarity=0.533 Sum_probs=27.6
Q ss_pred EEEEeeeccccchhhhHHHHHHHHHHHHcC
Q 011528 155 IVVACTFDHRIADAYSTDMFLVSWAEIAQS 184 (483)
Q Consensus 155 ~~l~~~~~H~v~Dg~g~~~fl~~Wa~~~rg 184 (483)
+-|+++++|.+.||.-+..|++.+.+.+..
T Consensus 196 m~lsls~DHRviDGa~aa~Fl~~lk~~le~ 225 (233)
T 1scz_A 196 MYLALSYDHRLIDGRESVGFLVTIKELLED 225 (233)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHhC
Confidence 679999999999999999999999998763
No 18
>1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A
Probab=70.05 E-value=3.2 Score=38.73 Aligned_cols=29 Identities=10% Similarity=0.315 Sum_probs=27.1
Q ss_pred EEEEeeeccccchhhhHHHHHHHHHHHHc
Q 011528 155 IVVACTFDHRIADAYSTDMFLVSWAEIAQ 183 (483)
Q Consensus 155 ~~l~~~~~H~v~Dg~g~~~fl~~Wa~~~r 183 (483)
+-|+++++|.+.||.-+..|++.+.+.+.
T Consensus 208 m~lsls~DHRviDGa~aa~Fl~~lk~~le 236 (243)
T 1dpb_A 208 LPLSLSYDCRVINGAAAARFTKRLGDLLA 236 (243)
T ss_dssp EEEEEEEETTTSCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEECcccccHHHHHHHHHHHHHHHh
Confidence 67999999999999999999999998875
No 19
>3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728}
Probab=69.05 E-value=3 Score=38.42 Aligned_cols=30 Identities=20% Similarity=0.447 Sum_probs=27.6
Q ss_pred EEEEeeeccccchhhhHHHHHHHHHHHHcC
Q 011528 155 IVVACTFDHRIADAYSTDMFLVSWAEIAQS 184 (483)
Q Consensus 155 ~~l~~~~~H~v~Dg~g~~~fl~~Wa~~~rg 184 (483)
+-|+++++|.+.||.-+..|++.+.+.+..
T Consensus 187 m~lsls~DHRviDGa~aa~Fl~~l~~~le~ 216 (224)
T 3rqc_A 187 MYLSLSCDHRLIDGAVATRFIVDLKKVIED 216 (224)
T ss_dssp CCEEEEEETTTSCHHHHHHHHHHHHHHHTC
T ss_pred EEEEEEeccceecHHHHHHHHHHHHHHHhC
Confidence 558999999999999999999999998874
No 20
>2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A*
Probab=68.58 E-value=3.6 Score=38.89 Aligned_cols=29 Identities=28% Similarity=0.453 Sum_probs=27.0
Q ss_pred EEEEeeeccccchhhhHHHHHHHHHHHHc
Q 011528 155 IVVACTFDHRIADAYSTDMFLVSWAEIAQ 183 (483)
Q Consensus 155 ~~l~~~~~H~v~Dg~g~~~fl~~Wa~~~r 183 (483)
+-|+++++|.+.||.-+..|++.+.+.+.
T Consensus 224 m~lsls~DHRviDGa~aa~Fl~~lk~~Le 252 (262)
T 2ii3_A 224 MNVSWSADHRIIDGATVSRFSNLWKSYLE 252 (262)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEECcceecHHHHHHHHHHHHHHHh
Confidence 67999999999999999999999998875
No 21
>3mae_A 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase; 2-oxoacid dehydrogenases acyltransferase; 2.50A {Listeria monocytogenes}
Probab=64.38 E-value=4.9 Score=37.81 Aligned_cols=30 Identities=23% Similarity=0.360 Sum_probs=27.8
Q ss_pred EEEEeeeccccchhhhHHHHHHHHHHHHcC
Q 011528 155 IVVACTFDHRIADAYSTDMFLVSWAEIAQS 184 (483)
Q Consensus 155 ~~l~~~~~H~v~Dg~g~~~fl~~Wa~~~rg 184 (483)
+-|+++++|.+.||.-+..|++.+.+.+..
T Consensus 210 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~ 239 (256)
T 3mae_A 210 VNLCLSIDHRILDGLLAGKFLQAIKANVEK 239 (256)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEEccccccHHHHHHHHHHHHHHHhC
Confidence 569999999999999999999999999874
No 22
>3l60_A Branched-chain alpha-keto acid dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: c.43.1.0
Probab=63.31 E-value=5.3 Score=37.44 Aligned_cols=30 Identities=27% Similarity=0.680 Sum_probs=27.7
Q ss_pred EEEEeeeccccchhhhHHHHHHHHHHHHcC
Q 011528 155 IVVACTFDHRIADAYSTDMFLVSWAEIAQS 184 (483)
Q Consensus 155 ~~l~~~~~H~v~Dg~g~~~fl~~Wa~~~rg 184 (483)
+-|+++++|.+.||.-+..|++.+.+.+..
T Consensus 205 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~ 234 (250)
T 3l60_A 205 MTLTCVFDHRVVDGAQVAQFMCELRDLIES 234 (250)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHS
T ss_pred eEEEEEecccccCHHHHHHHHHHHHHHHhC
Confidence 569999999999999999999999998874
No 23
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=45.08 E-value=25 Score=25.18 Aligned_cols=36 Identities=22% Similarity=0.333 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHHhccccccEEEecCC-CCeEEEeCC
Q 011528 68 VDVLKKAMAEALVSYYALAGEVVYNDV-GEPELLCNN 103 (483)
Q Consensus 68 ~~~L~~sL~~~L~~~p~LaGrl~~~~~-g~~~i~~~~ 103 (483)
++.++++|.+.+.+-..+||.+.+.-+ +.++|++.+
T Consensus 12 leafekalkemirqarkfagtvtytldgndleiritg 48 (85)
T 2kl8_A 12 LEAFEKALKEMIRQARKFAGTVTYTLDGNDLEIRITG 48 (85)
T ss_dssp HHHHHHHHHHHHHHHTTTTCEEEEEECSSCEEEEEES
T ss_pred HHHHHHHHHHHHHHHHhhcceEEEEecCCeeEEEEec
Confidence 688899999999999999999988744 458888763
No 24
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=42.61 E-value=46 Score=26.91 Aligned_cols=35 Identities=23% Similarity=0.339 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHhccccccEEEecCC-CCeEEEeC
Q 011528 68 VDVLKKAMAEALVSYYALAGEVVYNDV-GEPELLCN 102 (483)
Q Consensus 68 ~~~L~~sL~~~L~~~p~LaGrl~~~~~-g~~~i~~~ 102 (483)
++.|+++|.+.+.+-..+||.+.+.=+ ++++|.+.
T Consensus 94 lea~ekalkemirqarkfagtvtytl~gn~l~i~it 129 (170)
T 4hhu_A 94 LEALEKALKEMIRQARKFAGTVTYTLSGNRLVIVIT 129 (170)
T ss_dssp HHHHHHHHHHHHHHHHHTTCEEEEEECSSEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHhhcceEEEEEeCCEEEEEEe
Confidence 688999999999999999999988743 46777765
No 25
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Probab=40.56 E-value=5.8 Score=40.25 Aligned_cols=30 Identities=20% Similarity=0.382 Sum_probs=0.0
Q ss_pred EEEEeeeccccchhhhHHHHHHHHHHHHcC
Q 011528 155 IVVACTFDHRIADAYSTDMFLVSWAEIAQS 184 (483)
Q Consensus 155 ~~l~~~~~H~v~Dg~g~~~fl~~Wa~~~rg 184 (483)
+-|+++++|.+.||.-+..|++.+.+.+..
T Consensus 391 m~lsls~DHRviDG~~aa~Fl~~lk~~Le~ 420 (428)
T 3dva_I 391 LALSLSFDHRMIDGATAQKALNHIKRLLSD 420 (428)
T ss_dssp ------------------------------
T ss_pred EEEEEEecccccchHHHHHHHHHHHHHHhC
Confidence 459999999999999999999999887763
No 26
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=40.43 E-value=46 Score=26.91 Aligned_cols=35 Identities=23% Similarity=0.339 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHHhccccccEEEecCC-CCeEEEeC
Q 011528 68 VDVLKKAMAEALVSYYALAGEVVYNDV-GEPELLCN 102 (483)
Q Consensus 68 ~~~L~~sL~~~L~~~p~LaGrl~~~~~-g~~~i~~~ 102 (483)
++.|+++|.+.+.+-..+||.+.+.=+ ++++|.+.
T Consensus 13 lea~ekalkemirqarkfagtvtytl~gn~l~i~it 48 (170)
T 4hhu_A 13 LEALEKALKEMIRQARKFAGTVTYTLSGNRLVIVIT 48 (170)
T ss_dssp HHHHHHHHHHHHHHHHHTTCEEEEEEETTEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHhhcceEEEEEeCCEEEEEEe
Confidence 688999999999999999999987633 46777765
No 27
>1x93_A Hypothetical protein HP0222; JHP0208, transcription, regula METJ, MNT, PArg, COPG, REPA; NMR {Helicobacter pylori} SCOP: a.43.1.3
Probab=32.77 E-value=52 Score=22.18 Aligned_cols=37 Identities=19% Similarity=0.382 Sum_probs=26.1
Q ss_pred EEEEEeCHHHHHHHHHHhhcCCCCCCChhHHHHHHHHHHHHHhc
Q 011528 241 SRIYYIKSEQLNELQLLATTGSNGRRTKLESFSAFLWKMVARSA 284 (483)
Q Consensus 241 ~~~f~f~~~~i~~Lk~~a~~~~~~~~St~d~l~A~lW~~~~~Ar 284 (483)
...|+|++++-+.|++.|.++. |.+..+|=+.+.++.
T Consensus 3 ~Vs~Y~SkEey~~L~klA~eE~-------eSV~sfIKR~IlK~l 39 (55)
T 1x93_A 3 AVSLYFSDEQYQKLEKMANEEE-------ESVGSYIKRYILKAL 39 (55)
T ss_dssp EEEEEECHHHHHHHHHHHHHTT-------SCTTHHHHHHHHHHH
T ss_pred eEEEEecHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHH
Confidence 4579999999999999998764 223344555555553
No 28
>2k1o_A Putative; repressor, transcriptional regulator, D binding, ribbon-helix-helix, HP0564, JHP0511, unknown funct regulation; NMR {Helicobacter pylori}
Probab=30.01 E-value=96 Score=21.67 Aligned_cols=41 Identities=22% Similarity=0.387 Sum_probs=31.8
Q ss_pred CCceEEEEEeCHHHHHHHHHHhhcCCCCCCChhHHHHHHHHHHHHHhc
Q 011528 237 NKLVSRIYYIKSEQLNELQLLATTGSNGRRTKLESFSAFLWKMVARSA 284 (483)
Q Consensus 237 ~~~~~~~f~f~~~~i~~Lk~~a~~~~~~~~St~d~l~A~lW~~~~~Ar 284 (483)
++.-...|+|+.++-+.|.+.|.++. |.+..+|=+.|.++.
T Consensus 13 k~~~~Vs~Y~SkEey~~L~klA~eE~-------eSV~sfIKR~IlK~l 53 (66)
T 2k1o_A 13 KRNFSVTFYLSKEEHDVLRRLADEEV-------ESVNSFVKRHILKTI 53 (66)
T ss_dssp CCCEEEEEEEEHHHHHHHHHHHHTTC-------SCHHHHHHHHHHHHH
T ss_pred ccceEEEEEecHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHH
Confidence 44556789999999999999998764 456667777777764
No 29
>2xl1_A Arginine attenuator peptide; translation, antibiotic, ribosome, cytomegalovirus; NMR {Neurospora crassa}
Probab=24.27 E-value=43 Score=18.76 Aligned_cols=18 Identities=22% Similarity=0.399 Sum_probs=15.1
Q ss_pred CCChhHHHHHHHHHHHHH
Q 011528 265 RRTKLESFSAFLWKMVAR 282 (483)
Q Consensus 265 ~~St~d~l~A~lW~~~~~ 282 (483)
-+++.|-|+-++|+++..
T Consensus 7 vftsqdylsdhlwralna 24 (26)
T 2xl1_A 7 VFTSQDYLSDHLWRALNA 24 (26)
T ss_pred eeecHHHHHHHHHHHHhc
Confidence 468889999999998764
No 30
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis}
Probab=22.65 E-value=50 Score=37.69 Aligned_cols=30 Identities=27% Similarity=0.454 Sum_probs=27.0
Q ss_pred EEEEeeeccccchhhhHHHHHHHHHHHHcC
Q 011528 155 IVVACTFDHRIADAYSTDMFLVSWAEIAQS 184 (483)
Q Consensus 155 ~~l~~~~~H~v~Dg~g~~~fl~~Wa~~~rg 184 (483)
+-|+++++|.+.||.-+..|++.+.+.+..
T Consensus 192 m~lsls~DHRviDGa~aa~FL~~lk~~Le~ 221 (1113)
T 2xt6_A 192 ITLTSTYDHRIIQGAESGDFLRTIHQLLLD 221 (1113)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHTTC
T ss_pred eEEEEEECcceechHHHHHHHHHHHHHHhC
Confidence 789999999999999999999988877653
Done!