Query 011529
Match_columns 483
No_of_seqs 645 out of 3142
Neff 10.6
Searched_HMMs 46136
Date Fri Mar 29 02:22:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011529.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011529hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2271 UhpC Sugar phosphate p 100.0 1.9E-35 4.2E-40 270.6 27.7 352 99-459 24-387 (448)
2 COG2814 AraJ Arabinose efflux 100.0 1.1E-33 2.3E-38 263.2 31.5 333 100-460 9-341 (394)
3 TIGR02332 HpaX 4-hydroxyphenyl 100.0 2.1E-32 4.6E-37 267.9 31.8 286 100-388 4-310 (412)
4 PRK03545 putative arabinose tr 100.0 6.7E-32 1.5E-36 263.3 34.2 329 101-459 6-334 (390)
5 TIGR00894 2A0114euk Na(+)-depe 100.0 7.9E-32 1.7E-36 269.0 34.3 362 98-459 13-401 (465)
6 KOG2532 Permease of the major 100.0 9.6E-32 2.1E-36 261.3 32.7 341 131-471 65-412 (466)
7 PRK11663 regulatory protein Uh 100.0 1.3E-31 2.8E-36 264.6 31.3 282 102-385 21-307 (434)
8 PRK14995 methyl viologen resis 100.0 3.5E-31 7.5E-36 265.5 33.8 285 101-388 3-326 (495)
9 PRK09556 uhpT sugar phosphate 100.0 3.7E-32 8E-37 271.0 26.0 286 102-389 27-326 (467)
10 TIGR00903 2A0129 major facilit 100.0 7.6E-31 1.7E-35 251.7 32.8 319 117-461 4-323 (368)
11 TIGR00893 2A0114 d-galactonate 100.0 1.8E-31 3.8E-36 261.1 28.8 343 113-459 3-352 (399)
12 PLN00028 nitrate transmembrane 100.0 2.1E-30 4.6E-35 258.2 35.4 347 101-459 33-388 (476)
13 PRK10213 nepI ribonucleoside t 100.0 6.2E-30 1.3E-34 249.0 36.5 263 102-385 18-280 (394)
14 TIGR01299 synapt_SV2 synaptic 100.0 2.2E-30 4.8E-35 264.4 33.8 185 99-286 162-359 (742)
15 PRK11551 putative 3-hydroxyphe 100.0 4.2E-30 9.1E-35 252.3 32.4 336 99-459 10-349 (406)
16 TIGR00710 efflux_Bcr_CflA drug 100.0 7.9E-30 1.7E-34 248.7 34.1 267 106-388 7-273 (385)
17 PRK10406 alpha-ketoglutarate t 100.0 1.3E-29 2.7E-34 250.4 35.6 269 101-388 19-310 (432)
18 COG2223 NarK Nitrate/nitrite t 100.0 1.3E-30 2.7E-35 239.6 23.8 344 99-466 9-362 (417)
19 PRK15402 multidrug efflux syst 100.0 2.6E-29 5.6E-34 246.6 34.9 275 99-388 8-282 (406)
20 PF07690 MFS_1: Major Facilita 100.0 1E-30 2.2E-35 251.7 23.9 335 110-459 2-340 (352)
21 TIGR00891 2A0112 putative sial 100.0 1.7E-29 3.6E-34 248.1 32.5 288 99-389 7-306 (405)
22 PRK03699 putative transporter; 100.0 3.9E-29 8.6E-34 244.0 34.1 268 101-388 4-272 (394)
23 PRK11273 glpT sn-glycerol-3-ph 100.0 3.2E-29 6.9E-34 248.9 33.4 286 101-387 26-319 (452)
24 TIGR00886 2A0108 nitrite extru 100.0 1.8E-29 3.8E-34 244.5 30.3 341 107-459 4-358 (366)
25 TIGR00711 efflux_EmrB drug res 100.0 5.8E-30 1.3E-34 257.5 27.8 281 105-388 3-322 (485)
26 PRK15034 nitrate/nitrite trans 100.0 2.6E-29 5.6E-34 242.6 30.6 263 102-389 32-318 (462)
27 TIGR00890 2A0111 Oxalate/Forma 100.0 3.2E-29 7E-34 243.5 29.8 258 116-389 15-272 (377)
28 TIGR00881 2A0104 phosphoglycer 100.0 5.1E-30 1.1E-34 249.3 24.2 274 112-387 3-282 (379)
29 PRK10091 MFS transport protein 100.0 1.2E-28 2.6E-33 239.6 33.7 263 105-388 4-266 (382)
30 PRK10133 L-fucose transporter; 100.0 1.7E-28 3.7E-33 241.5 34.6 336 102-462 24-390 (438)
31 PRK09705 cynX putative cyanate 100.0 8.3E-29 1.8E-33 241.3 31.7 264 101-388 7-271 (393)
32 PRK12307 putative sialic acid 100.0 1.3E-28 2.8E-33 243.4 32.4 280 101-388 15-297 (426)
33 TIGR00712 glpT glycerol-3-phos 100.0 7.8E-29 1.7E-33 245.2 30.6 286 102-388 25-318 (438)
34 PRK11652 emrD multidrug resist 100.0 4.6E-28 1E-32 236.8 35.5 332 102-459 6-339 (394)
35 TIGR00900 2A0121 H+ Antiporter 100.0 1.5E-28 3.3E-33 237.7 31.5 333 109-459 4-342 (365)
36 PRK15403 multidrug efflux syst 100.0 4.6E-28 9.9E-33 237.3 35.1 265 107-386 19-283 (413)
37 PRK11102 bicyclomycin/multidru 100.0 1.2E-28 2.5E-33 239.7 30.3 256 119-388 6-261 (377)
38 PRK10642 proline/glycine betai 100.0 6.6E-28 1.4E-32 241.7 34.7 279 103-388 15-317 (490)
39 PRK11043 putative transporter; 100.0 1.1E-27 2.4E-32 234.6 34.2 328 109-461 11-338 (401)
40 TIGR00892 2A0113 monocarboxyla 100.0 1.8E-28 3.9E-33 243.1 28.4 351 99-459 14-374 (455)
41 PRK10504 putative transporter; 100.0 2.2E-27 4.8E-32 237.5 36.4 281 105-388 11-328 (471)
42 TIGR00897 2A0118 polyol permea 100.0 8.7E-28 1.9E-32 235.1 32.2 268 107-388 16-288 (402)
43 TIGR00895 2A0115 benzoate tran 100.0 1.5E-28 3.2E-33 240.7 26.8 348 100-459 13-379 (398)
44 PRK15075 citrate-proton sympor 100.0 2.3E-27 4.9E-32 234.5 34.4 270 102-388 13-305 (434)
45 PRK10473 multidrug efflux syst 100.0 2.9E-27 6.3E-32 231.0 34.7 266 106-388 5-270 (392)
46 TIGR00899 2A0120 sugar efflux 100.0 2.8E-27 6.1E-32 229.8 32.6 320 111-458 4-327 (375)
47 TIGR00885 fucP L-fucose:H+ sym 100.0 6.9E-27 1.5E-31 228.1 32.5 326 106-456 5-358 (410)
48 PRK03893 putative sialic acid 100.0 6.1E-27 1.3E-31 236.1 33.1 285 100-388 16-342 (496)
49 PRK09952 shikimate transporter 100.0 1.3E-26 2.8E-31 229.0 33.5 274 101-388 19-317 (438)
50 PRK11195 lysophospholipid tran 100.0 6E-27 1.3E-31 228.0 30.5 266 108-388 7-272 (393)
51 KOG1330 Sugar transporter/spin 100.0 4.2E-29 9E-34 231.2 14.3 282 99-387 28-313 (493)
52 PRK10489 enterobactin exporter 100.0 3.9E-27 8.4E-32 231.9 25.7 326 111-459 24-353 (417)
53 PRK05122 major facilitator sup 100.0 3.3E-26 7.2E-31 224.1 31.6 259 104-388 15-280 (399)
54 TIGR00879 SP MFS transporter, 100.0 7.1E-27 1.5E-31 234.6 26.9 286 102-389 26-351 (481)
55 TIGR00902 2A0127 phenyl propri 100.0 3.2E-26 6.8E-31 222.5 30.1 323 109-459 9-333 (382)
56 PRK03633 putative MFS family t 100.0 1.2E-25 2.6E-30 218.5 33.7 260 105-388 7-266 (381)
57 PRK11646 multidrug resistance 100.0 1.9E-25 4.2E-30 218.0 35.0 320 111-460 17-339 (400)
58 PRK09874 drug efflux system pr 100.0 2.2E-25 4.7E-30 219.2 35.3 327 106-459 16-352 (408)
59 PRK10077 xylE D-xylose transpo 100.0 2.8E-26 6.1E-31 230.2 29.3 351 100-459 8-405 (479)
60 PRK12382 putative transporter; 100.0 7.9E-26 1.7E-30 220.9 31.1 319 106-459 17-343 (392)
61 TIGR00901 2A0125 AmpG-related 100.0 7.8E-26 1.7E-30 218.0 29.7 317 121-459 5-350 (356)
62 cd06174 MFS The Major Facilita 100.0 1.5E-25 3.3E-30 215.4 31.1 303 108-459 3-306 (352)
63 PRK15011 sugar efflux transpor 100.0 4.7E-25 1E-29 215.1 34.7 258 110-388 21-283 (393)
64 KOG2533 Permease of the major 100.0 2.7E-26 5.8E-31 223.6 25.3 281 102-384 43-336 (495)
65 PRK10054 putative transporter; 100.0 1.4E-25 3.1E-30 218.5 30.2 262 108-388 11-275 (395)
66 TIGR00896 CynX cyanate transpo 100.0 1.7E-25 3.7E-30 215.5 29.8 245 120-387 16-262 (355)
67 PRK11128 putative 3-phenylprop 99.9 2E-25 4.3E-30 217.0 29.9 316 113-458 13-332 (382)
68 COG0738 FucP Fucose permease [ 99.9 1.9E-24 4.2E-29 197.5 33.3 339 105-467 14-372 (422)
69 TIGR00883 2A0106 metabolite-pr 99.9 4.4E-25 9.6E-30 215.7 31.3 323 114-458 3-352 (394)
70 TIGR00805 oat sodium-independe 99.9 2.8E-26 6.2E-31 233.9 23.6 282 106-387 35-397 (633)
71 PF05977 MFS_3: Transmembrane 99.9 6.3E-26 1.4E-30 224.6 23.5 340 105-465 11-354 (524)
72 TIGR00887 2A0109 phosphate:H+ 99.9 1.1E-24 2.4E-29 219.2 32.3 289 99-389 11-367 (502)
73 PRK11010 ampG muropeptide tran 99.9 7.4E-24 1.6E-28 211.6 35.3 266 108-388 16-290 (491)
74 PRK11902 ampG muropeptide tran 99.9 2.1E-23 4.5E-28 204.3 35.2 265 109-388 4-277 (402)
75 TIGR00898 2A0119 cation transp 99.9 1.2E-24 2.6E-29 219.8 26.4 318 125-459 110-451 (505)
76 TIGR00806 rfc RFC reduced fola 99.9 3.5E-23 7.5E-28 196.0 32.3 335 118-463 40-398 (511)
77 KOG2504 Monocarboxylate transp 99.9 8.6E-24 1.9E-28 208.4 28.5 349 98-457 40-427 (509)
78 PRK06814 acylglycerophosphoeth 99.9 1E-23 2.3E-28 232.8 32.1 270 108-389 19-293 (1140)
79 TIGR00882 2A0105 oligosacchari 99.9 7.8E-23 1.7E-27 199.9 32.7 273 106-389 4-286 (396)
80 PRK08633 2-acyl-glycerophospho 99.9 1.4E-23 3E-28 232.6 30.1 320 122-459 28-363 (1146)
81 PRK09528 lacY galactoside perm 99.9 1.1E-22 2.5E-27 200.4 30.1 269 110-389 16-294 (420)
82 COG2807 CynX Cyanate permease 99.9 6.1E-22 1.3E-26 178.5 31.2 263 103-388 11-274 (395)
83 TIGR00924 yjdL_sub1_fam amino 99.9 2.9E-22 6.4E-27 199.1 31.6 350 106-459 12-422 (475)
84 KOG3764 Vesicular amine transp 99.9 6.8E-24 1.5E-28 192.5 17.3 238 131-387 98-336 (464)
85 TIGR02718 sider_RhtX_FptX side 99.9 1.6E-21 3.4E-26 190.3 31.1 265 106-388 3-275 (390)
86 PRK10207 dipeptide/tripeptide 99.9 1.2E-21 2.5E-26 194.9 29.4 359 105-466 15-428 (489)
87 TIGR00792 gph sugar (Glycoside 99.9 4.6E-22 1E-26 197.4 23.7 257 119-388 14-288 (437)
88 PF06609 TRI12: Fungal trichot 99.9 2.1E-21 4.6E-26 191.5 27.4 275 109-388 49-380 (599)
89 TIGR00889 2A0110 nucleoside tr 99.9 5.1E-21 1.1E-25 187.6 28.4 319 110-459 8-349 (418)
90 KOG0569 Permease of the major 99.9 2.3E-20 5E-25 179.7 30.2 313 141-457 62-407 (485)
91 KOG0254 Predicted transporter 99.9 1.1E-20 2.3E-25 190.4 28.0 284 106-394 47-366 (513)
92 KOG0253 Synaptic vesicle trans 99.9 9.5E-21 2.1E-25 169.9 22.5 360 98-471 72-489 (528)
93 KOG2615 Permease of the major 99.9 5.6E-21 1.2E-25 172.6 19.5 322 129-460 58-394 (451)
94 PTZ00207 hypothetical protein; 99.9 3.6E-19 7.7E-24 177.1 32.1 284 99-387 23-421 (591)
95 PRK09584 tppB putative tripept 99.9 3.6E-19 7.8E-24 178.1 31.7 347 107-459 24-423 (500)
96 PRK15462 dipeptide/tripeptide 99.9 2.5E-18 5.4E-23 168.4 32.1 353 106-459 11-418 (493)
97 PF03825 Nuc_H_symport: Nucleo 99.8 9.8E-19 2.1E-23 168.6 27.4 324 110-459 8-342 (400)
98 PRK09669 putative symporter Ya 99.8 1.2E-18 2.6E-23 172.9 28.1 252 121-388 26-295 (444)
99 PF13347 MFS_2: MFS/sugar tran 99.8 6.2E-19 1.3E-23 174.0 21.6 253 125-391 23-294 (428)
100 TIGR01301 GPH_sucrose GPH fami 99.8 2.1E-17 4.5E-22 161.3 31.5 267 114-387 14-335 (477)
101 KOG2563 Permease of the major 99.8 1.1E-17 2.4E-22 155.2 25.8 282 95-387 36-331 (480)
102 PRK10429 melibiose:sodium symp 99.8 7E-18 1.5E-22 168.5 26.6 268 111-389 13-298 (473)
103 PF01306 LacY_symp: LacY proto 99.8 3.2E-17 6.9E-22 155.1 29.2 330 107-456 10-350 (412)
104 KOG0255 Synaptic vesicle trans 99.8 1E-17 2.2E-22 169.8 27.1 247 131-387 110-380 (521)
105 PRK11462 putative transporter; 99.8 9E-17 1.9E-21 159.4 32.9 261 111-388 16-294 (460)
106 TIGR01272 gluP glucose/galacto 99.8 8.7E-18 1.9E-22 157.5 21.4 243 193-458 9-269 (310)
107 COG2211 MelB Na+/melibiose sym 99.8 4.6E-17 1E-21 155.4 26.4 323 108-448 16-356 (467)
108 KOG4686 Predicted sugar transp 99.8 1.5E-19 3.2E-24 156.6 8.4 278 101-388 41-331 (459)
109 PRK09848 glucuronide transport 99.8 7.8E-17 1.7E-21 160.2 28.0 262 111-388 15-295 (448)
110 KOG0252 Inorganic phosphate tr 99.8 1.2E-19 2.6E-24 168.0 5.7 353 98-461 35-449 (538)
111 TIGR00788 fbt folate/biopterin 99.8 3.1E-17 6.8E-22 162.7 20.0 276 105-387 27-318 (468)
112 PF11700 ATG22: Vacuole efflux 99.8 7.5E-15 1.6E-19 144.4 35.9 306 139-457 70-419 (477)
113 KOG3626 Organic anion transpor 99.7 1.7E-16 3.6E-21 157.9 21.3 284 104-387 97-459 (735)
114 PF00083 Sugar_tr: Sugar (and 99.7 1.2E-21 2.6E-26 195.2 -15.9 279 111-393 7-322 (451)
115 PF03209 PUCC: PUCC protein; 99.7 9.7E-15 2.1E-19 135.7 25.8 310 130-457 6-340 (403)
116 PF05631 DUF791: Protein of un 99.7 2E-14 4.3E-19 131.6 25.8 249 118-383 48-304 (354)
117 COG3104 PTR2 Dipeptide/tripept 99.7 3.8E-14 8.2E-19 134.4 27.0 351 106-457 23-433 (498)
118 COG2270 Permeases of the major 99.7 8.7E-14 1.9E-18 129.0 26.0 305 138-459 57-382 (438)
119 PF03137 OATP: Organic Anion T 99.6 1.4E-17 3E-22 165.9 -0.2 280 108-387 7-372 (539)
120 TIGR00889 2A0110 nucleoside tr 99.6 5.8E-15 1.3E-19 144.9 17.2 163 123-285 227-406 (418)
121 KOG2325 Predicted transporter/ 99.6 3.3E-13 7.1E-18 129.5 24.7 259 100-366 30-307 (488)
122 TIGR00890 2A0111 Oxalate/Forma 99.6 2.3E-14 4.9E-19 139.1 16.2 151 123-273 224-374 (377)
123 PRK05122 major facilitator sup 99.6 1.3E-13 2.8E-18 135.1 21.2 159 123-285 235-393 (399)
124 TIGR00880 2_A_01_02 Multidrug 99.6 1.3E-14 2.7E-19 119.6 11.7 136 145-282 4-139 (141)
125 PRK10642 proline/glycine betai 99.6 2.7E-13 5.9E-18 136.2 23.7 169 117-286 263-434 (490)
126 PRK15011 sugar efflux transpor 99.6 1.5E-13 3.3E-18 134.2 21.2 156 122-280 234-390 (393)
127 PRK09528 lacY galactoside perm 99.6 2.3E-14 5.1E-19 141.3 15.4 149 133-283 256-405 (420)
128 TIGR01299 synapt_SV2 synaptic 99.6 1E-13 2.3E-18 142.6 20.5 138 142-283 598-735 (742)
129 PRK11551 putative 3-hydroxyphe 99.6 1.2E-13 2.7E-18 135.6 19.4 158 121-280 237-395 (406)
130 PRK09556 uhpT sugar phosphate 99.6 8.6E-14 1.9E-18 139.1 18.4 175 106-280 260-448 (467)
131 TIGR00902 2A0127 phenyl propri 99.6 2.1E-13 4.6E-18 132.6 19.8 160 113-276 214-374 (382)
132 COG2271 UhpC Sugar phosphate p 99.6 6.1E-14 1.3E-18 129.8 14.8 183 101-283 249-436 (448)
133 KOG2816 Predicted transporter 99.6 5.3E-13 1.1E-17 129.9 21.5 338 104-458 22-370 (463)
134 PRK09874 drug efflux system pr 99.6 1.2E-13 2.7E-18 135.7 17.2 160 122-283 237-400 (408)
135 PRK12382 putative transporter; 99.5 4.4E-13 9.5E-18 131.0 20.3 155 122-280 234-388 (392)
136 PRK10489 enterobactin exporter 99.5 2.2E-13 4.7E-18 134.3 17.7 160 123-284 242-402 (417)
137 TIGR00893 2A0114 d-galactonate 99.5 6.4E-13 1.4E-17 129.8 20.8 167 109-278 220-396 (399)
138 PRK03545 putative arabinose tr 99.5 6.8E-13 1.5E-17 129.6 20.7 152 127-282 229-381 (390)
139 TIGR00879 SP MFS transporter, 99.5 6.9E-14 1.5E-18 140.4 14.0 182 103-284 283-473 (481)
140 TIGR00899 2A0120 sugar efflux 99.5 7.1E-13 1.5E-17 128.7 20.1 152 125-279 220-372 (375)
141 cd06174 MFS The Major Facilita 99.5 5.8E-13 1.3E-17 127.8 19.3 164 113-278 184-349 (352)
142 PRK11273 glpT sn-glycerol-3-ph 99.5 4.1E-13 8.8E-18 133.6 18.1 173 110-282 259-436 (452)
143 PRK03633 putative MFS family t 99.5 1.4E-12 3E-17 126.9 20.9 153 123-280 219-371 (381)
144 PRK03699 putative transporter; 99.5 9.3E-13 2E-17 128.7 19.4 166 112-280 213-379 (394)
145 PRK09705 cynX putative cyanate 99.5 2.2E-12 4.7E-17 126.0 21.8 166 117-285 218-385 (393)
146 PRK11663 regulatory protein Uh 99.5 8.4E-13 1.8E-17 130.6 19.1 173 111-283 250-426 (434)
147 TIGR00892 2A0113 monocarboxyla 99.5 1.5E-13 3.2E-18 136.6 13.4 161 113-275 250-415 (455)
148 COG2814 AraJ Arabinose efflux 99.5 2.4E-12 5.3E-17 120.8 19.7 176 105-283 213-388 (394)
149 PF01770 Folate_carrier: Reduc 99.5 2.6E-10 5.6E-15 107.8 32.8 327 125-461 25-383 (412)
150 TIGR00891 2A0112 putative sial 99.5 7.2E-13 1.6E-17 130.0 16.5 140 124-265 258-400 (405)
151 PRK03893 putative sialic acid 99.5 1.1E-12 2.4E-17 132.4 18.2 150 123-272 294-444 (496)
152 TIGR00883 2A0106 metabolite-pr 99.5 4.4E-13 9.6E-18 130.9 14.6 161 111-271 226-391 (394)
153 PRK11010 ampG muropeptide tran 99.5 2E-11 4.3E-16 122.4 25.1 154 127-281 246-403 (491)
154 TIGR00897 2A0118 polyol permea 99.5 4.4E-12 9.5E-17 124.3 19.2 166 113-280 231-400 (402)
155 PRK12307 putative sialic acid 99.4 6.1E-12 1.3E-16 124.4 19.3 143 123-265 250-392 (426)
156 PRK11128 putative 3-phenylprop 99.4 8.2E-12 1.8E-16 121.5 19.8 148 123-274 224-372 (382)
157 PRK09952 shikimate transporter 99.4 1.2E-11 2.5E-16 122.6 20.2 160 121-280 267-432 (438)
158 PF05977 MFS_3: Transmembrane 99.4 1.3E-11 2.7E-16 123.1 18.5 155 123-279 237-392 (524)
159 KOG0569 Permease of the major 99.4 1.4E-11 3.1E-16 119.3 17.9 191 96-287 262-460 (485)
160 TIGR00895 2A0115 benzoate tran 99.4 3.5E-12 7.6E-17 124.8 13.6 142 110-253 256-397 (398)
161 PF11700 ATG22: Vacuole efflux 99.4 3.7E-11 8.1E-16 118.4 20.3 176 104-281 281-468 (477)
162 TIGR00882 2A0105 oligosacchari 99.4 2E-11 4.3E-16 119.5 18.2 141 135-277 250-391 (396)
163 PRK15075 citrate-proton sympor 99.4 2E-11 4.4E-16 120.9 18.4 145 116-260 250-398 (434)
164 PRK10504 putative transporter; 99.4 2E-11 4.4E-16 122.3 18.1 147 113-259 270-418 (471)
165 TIGR00900 2A0121 H+ Antiporter 99.4 6.8E-12 1.5E-16 121.2 13.8 133 125-258 232-365 (365)
166 TIGR00712 glpT glycerol-3-phos 99.4 1.4E-11 3.1E-16 122.0 16.3 164 121-284 268-436 (438)
167 COG2223 NarK Nitrate/nitrite t 99.4 1.6E-11 3.5E-16 114.1 14.3 176 106-282 220-402 (417)
168 PRK10077 xylE D-xylose transpo 99.4 3.6E-11 7.9E-16 120.8 18.3 165 120-284 287-460 (479)
169 KOG2504 Monocarboxylate transp 99.3 2.6E-11 5.5E-16 120.3 16.5 176 104-281 298-476 (509)
170 TIGR00881 2A0104 phosphoglycer 99.3 1.5E-11 3.2E-16 119.5 14.3 153 111-263 223-379 (379)
171 PRK10054 putative transporter; 99.3 3.7E-11 8.1E-16 117.3 16.9 151 132-284 237-387 (395)
172 TIGR02718 sider_RhtX_FptX side 99.3 5.2E-11 1.1E-15 116.3 17.9 151 126-276 230-386 (390)
173 TIGR01272 gluP glucose/galacto 99.3 1.2E-10 2.6E-15 109.4 19.5 159 106-269 142-303 (310)
174 PRK10213 nepI ribonucleoside t 99.3 1.9E-10 4.1E-15 112.3 21.3 146 127-276 240-386 (394)
175 PF01306 LacY_symp: LacY proto 99.3 3.8E-11 8.2E-16 114.1 15.8 162 123-286 243-405 (412)
176 PRK10406 alpha-ketoglutarate t 99.3 1.1E-10 2.4E-15 115.6 19.8 159 120-279 259-422 (432)
177 TIGR00898 2A0119 cation transp 99.3 3.2E-11 7E-16 122.0 16.1 148 128-280 347-494 (505)
178 TIGR00887 2A0109 phosphate:H+ 99.3 1.6E-11 3.4E-16 123.9 13.6 162 122-284 306-491 (502)
179 KOG0253 Synaptic vesicle trans 99.3 5.8E-12 1.3E-16 114.1 8.7 133 147-285 389-523 (528)
180 TIGR00792 gph sugar (Glycoside 99.3 4.6E-11 9.9E-16 118.6 16.1 145 113-259 231-383 (437)
181 PRK15402 multidrug efflux syst 99.3 1.5E-10 3.2E-15 113.8 19.2 157 125-282 236-396 (406)
182 PF03825 Nuc_H_symport: Nucleo 99.3 1.9E-10 4.1E-15 111.2 19.3 172 111-283 214-397 (400)
183 PRK10091 MFS transport protein 99.3 2.3E-10 5E-15 111.3 19.6 151 127-281 223-376 (382)
184 PRK11902 ampG muropeptide tran 99.3 1.4E-10 3E-15 113.8 18.0 149 127-280 233-389 (402)
185 TIGR02332 HpaX 4-hydroxyphenyl 99.3 1.6E-10 3.4E-15 113.6 17.9 161 108-270 246-410 (412)
186 PF06963 FPN1: Ferroportin1 (F 99.3 2.4E-09 5.3E-14 103.1 24.8 282 106-389 4-325 (432)
187 PLN00028 nitrate transmembrane 99.3 5.7E-11 1.2E-15 118.8 13.7 154 124-281 272-433 (476)
188 PF06813 Nodulin-like: Nodulin 99.3 2.7E-09 5.9E-14 95.0 22.4 178 102-283 1-183 (250)
189 PF03092 BT1: BT1 family; Int 99.2 1.3E-10 2.9E-15 113.9 15.2 261 124-385 10-283 (433)
190 COG2270 Permeases of the major 99.2 2.3E-10 5.1E-15 106.5 15.5 155 121-277 270-425 (438)
191 TIGR00894 2A0114euk Na(+)-depe 99.2 3.1E-10 6.8E-15 113.5 17.2 174 105-280 262-449 (465)
192 TIGR00896 CynX cyanate transpo 99.2 5.2E-10 1.1E-14 107.8 18.1 137 119-258 212-350 (355)
193 KOG4686 Predicted sugar transp 99.2 6.2E-10 1.3E-14 97.5 16.1 169 105-279 268-441 (459)
194 PRK11646 multidrug resistance 99.2 2.5E-10 5.4E-15 111.7 15.5 151 124-276 228-383 (400)
195 TIGR00926 2A1704 Peptide:H+ sy 99.2 2.2E-08 4.8E-13 102.3 28.9 157 125-281 9-182 (654)
196 PRK15034 nitrate/nitrite trans 99.2 8.5E-10 1.8E-14 107.5 17.6 173 110-283 258-456 (462)
197 PRK09848 glucuronide transport 99.2 6.5E-10 1.4E-14 110.6 16.8 144 116-259 240-391 (448)
198 PRK10473 multidrug efflux syst 99.2 1.8E-09 3.9E-14 105.6 18.3 137 127-270 226-363 (392)
199 PRK10133 L-fucose transporter; 99.1 2.4E-09 5.2E-14 105.8 18.3 141 131-276 287-428 (438)
200 PRK08633 2-acyl-glycerophospho 99.1 1.5E-09 3.2E-14 121.1 18.3 147 123-271 251-400 (1146)
201 TIGR00711 efflux_EmrB drug res 99.1 1.1E-09 2.5E-14 110.2 15.8 136 121-256 272-410 (485)
202 PRK11195 lysophospholipid tran 99.1 4.1E-09 8.8E-14 102.9 18.9 147 130-280 232-379 (393)
203 TIGR00769 AAA ADP/ATP carrier 99.1 2.8E-07 6E-12 90.1 31.2 273 106-387 9-333 (472)
204 TIGR00710 efflux_Bcr_CflA drug 99.1 3.3E-09 7.1E-14 103.4 17.4 139 123-263 225-368 (385)
205 PRK06814 acylglycerophosphoeth 99.1 1.8E-09 3.8E-14 120.2 17.1 150 121-272 242-413 (1140)
206 TIGR00903 2A0129 major facilit 99.1 4.8E-09 1E-13 101.1 17.7 162 109-278 197-362 (368)
207 PRK10429 melibiose:sodium symp 99.1 4.7E-09 1E-13 105.1 18.3 150 110-259 237-396 (473)
208 PRK14995 methyl viologen resis 99.1 1.9E-09 4E-14 108.6 15.5 134 122-255 277-412 (495)
209 PRK11043 putative transporter; 99.1 8.4E-09 1.8E-13 101.2 19.3 138 124-262 223-363 (401)
210 PF07690 MFS_1: Major Facilita 99.1 1.2E-09 2.5E-14 105.0 12.9 131 117-247 219-352 (352)
211 PRK09669 putative symporter Ya 99.1 3.2E-09 7E-14 105.5 15.8 135 125-259 250-391 (444)
212 COG2807 CynX Cyanate permease 99.1 1.5E-08 3.2E-13 92.6 18.2 167 113-282 217-386 (395)
213 KOG3762 Predicted transporter 99.1 1.3E-09 2.8E-14 104.1 11.9 165 114-280 381-546 (618)
214 PF13347 MFS_2: MFS/sugar tran 99.1 6.1E-09 1.3E-13 103.0 17.2 154 106-259 227-387 (428)
215 KOG0637 Sucrose transporter an 99.0 1.7E-08 3.8E-13 94.8 18.1 271 117-394 45-369 (498)
216 PRK11102 bicyclomycin/multidru 99.0 1.5E-08 3.2E-13 98.5 18.2 128 123-251 213-344 (377)
217 TIGR00901 2A0125 AmpG-related 99.0 5.1E-09 1.1E-13 100.9 14.7 123 118-240 223-355 (356)
218 KOG4332 Predicted sugar transp 99.0 1.8E-08 4E-13 87.6 14.1 316 117-457 50-383 (454)
219 KOG3574 Acetyl-CoA transporter 99.0 1.7E-07 3.6E-12 85.9 20.3 264 103-381 30-324 (510)
220 KOG2532 Permease of the major 98.9 2E-08 4.4E-13 98.5 14.7 178 104-283 258-449 (466)
221 COG2211 MelB Na+/melibiose sym 98.9 4.7E-08 1E-12 94.2 16.5 153 107-259 239-399 (467)
222 TIGR00924 yjdL_sub1_fam amino 98.9 1E-07 2.2E-12 95.3 19.0 175 107-281 275-468 (475)
223 TIGR00885 fucP L-fucose:H+ sym 98.9 8.2E-08 1.8E-12 94.1 17.9 145 123-272 251-403 (410)
224 PF00083 Sugar_tr: Sugar (and 98.9 1.1E-11 2.4E-16 123.6 -10.8 164 121-286 270-441 (451)
225 PRK11462 putative transporter; 98.9 1.3E-07 2.7E-12 94.2 17.7 133 127-259 251-390 (460)
226 PRK11652 emrD multidrug resist 98.8 2.1E-07 4.6E-12 91.0 18.3 132 127-259 230-363 (394)
227 COG0738 FucP Fucose permease [ 98.8 1.4E-07 3.1E-12 87.7 15.3 162 108-274 240-402 (422)
228 COG0477 ProP Permeases of the 98.8 2.9E-07 6.3E-12 86.3 17.7 160 113-272 11-176 (338)
229 TIGR00788 fbt folate/biopterin 98.8 7.3E-08 1.6E-12 96.0 14.0 128 131-258 280-415 (468)
230 KOG3098 Uncharacterized conser 98.8 1.8E-06 3.9E-11 83.4 21.5 295 145-458 56-392 (461)
231 PF02487 CLN3: CLN3 protein; 98.7 2.8E-06 6E-11 80.8 21.5 135 141-283 61-197 (402)
232 KOG3764 Vesicular amine transp 98.7 3.6E-08 7.8E-13 91.0 8.3 164 115-280 281-453 (464)
233 TIGR00886 2A0108 nitrite extru 98.7 6.6E-08 1.4E-12 93.5 10.6 119 123-242 244-365 (366)
234 PF03209 PUCC: PUCC protein; 98.7 1.6E-06 3.4E-11 81.5 18.0 151 128-278 233-395 (403)
235 PF03219 TLC: TLC ATP/ADP tran 98.7 5.9E-05 1.3E-09 74.4 29.0 282 101-388 21-350 (491)
236 PRK15403 multidrug efflux syst 98.7 1.3E-06 2.8E-11 85.9 17.4 157 117-276 231-392 (413)
237 PRK09584 tppB putative tripept 98.6 7.9E-07 1.7E-11 89.4 15.6 139 141-279 318-477 (500)
238 KOG3810 Micronutrient transpor 98.6 2E-06 4.3E-11 78.1 15.1 319 132-461 34-369 (433)
239 KOG0252 Inorganic phosphate tr 98.6 2.8E-08 6E-13 93.4 3.4 178 104-281 304-498 (538)
240 TIGR01301 GPH_sucrose GPH fami 98.6 2.1E-06 4.6E-11 84.6 16.5 181 105-285 259-475 (477)
241 PRK10207 dipeptide/tripeptide 98.6 1.8E-06 3.8E-11 86.5 15.7 139 141-279 311-474 (489)
242 KOG0254 Predicted transporter 98.5 1.5E-06 3.3E-11 87.9 14.9 180 105-285 296-487 (513)
243 PF12832 MFS_1_like: MFS_1 lik 98.5 1.4E-06 3E-11 62.4 8.9 70 110-179 6-75 (77)
244 PF06779 DUF1228: Protein of u 98.4 1.4E-06 3.1E-11 62.7 8.3 79 116-196 4-82 (85)
245 KOG2533 Permease of the major 98.4 1.4E-06 3E-11 86.0 10.8 161 105-267 274-442 (495)
246 KOG3762 Predicted transporter 98.4 1.2E-06 2.5E-11 84.4 9.7 132 316-457 366-498 (618)
247 PF13000 Acatn: Acetyl-coenzym 98.4 3.9E-05 8.5E-10 73.7 19.6 271 107-380 3-336 (544)
248 PF05978 UNC-93: Ion channel r 98.4 2.4E-05 5.3E-10 64.4 15.3 109 143-254 41-149 (156)
249 KOG0255 Synaptic vesicle trans 98.4 2.1E-05 4.6E-10 80.0 17.6 158 127-288 341-499 (521)
250 KOG2615 Permease of the major 98.3 9.8E-06 2.1E-10 74.9 13.2 132 123-256 280-414 (451)
251 PF06609 TRI12: Fungal trichot 98.3 3E-05 6.6E-10 77.8 16.4 148 105-252 311-463 (599)
252 PTZ00207 hypothetical protein; 98.2 1.6E-05 3.4E-10 80.3 13.4 174 106-283 355-554 (591)
253 PRK15462 dipeptide/tripeptide 98.2 1.8E-05 3.8E-10 78.5 13.4 70 319-388 7-77 (493)
254 COG3202 ATP/ADP translocase [E 98.2 0.0077 1.7E-07 58.2 30.8 282 99-387 22-352 (509)
255 PF12832 MFS_1_like: MFS_1 lik 98.1 3.6E-05 7.8E-10 55.1 9.1 64 324-388 3-66 (77)
256 KOG2816 Predicted transporter 98.0 0.00024 5.3E-09 69.8 15.7 125 128-255 266-391 (463)
257 PF00854 PTR2: POT family; In 97.9 0.00012 2.7E-09 70.8 11.2 111 170-280 2-122 (372)
258 PF02487 CLN3: CLN3 protein; 97.7 0.00044 9.6E-09 66.0 12.4 138 109-253 252-394 (402)
259 COG3104 PTR2 Dipeptide/tripept 97.7 0.0012 2.6E-08 63.9 14.7 143 139-281 324-487 (498)
260 KOG3097 Predicted membrane pro 97.6 0.01 2.2E-07 54.2 18.6 72 149-223 68-139 (390)
261 TIGR00806 rfc RFC reduced fola 97.6 0.00037 8E-09 67.7 9.5 110 341-460 45-156 (511)
262 KOG1237 H+/oligopeptide sympor 97.6 0.002 4.3E-08 65.2 15.0 178 101-278 34-242 (571)
263 KOG2563 Permease of the major 97.6 9.2E-05 2E-09 70.3 5.0 178 106-283 268-452 (480)
264 PRK03612 spermidine synthase; 97.6 0.009 2E-07 60.2 19.5 142 130-272 41-188 (521)
265 KOG1330 Sugar transporter/spin 97.5 0.00031 6.7E-09 67.0 8.1 131 325-465 37-169 (493)
266 PF06963 FPN1: Ferroportin1 (F 97.2 0.0034 7.4E-08 61.1 11.4 130 122-251 276-413 (432)
267 PF07672 MFS_Mycoplasma: Mycop 97.2 0.0017 3.8E-08 57.4 8.4 101 226-334 2-107 (267)
268 KOG2325 Predicted transporter/ 97.2 0.001 2.3E-08 64.8 7.2 182 99-280 257-474 (488)
269 KOG1479 Nucleoside transporter 97.1 0.013 2.9E-07 55.6 13.9 113 110-226 24-148 (406)
270 PF06813 Nodulin-like: Nodulin 97.1 0.0036 7.9E-08 56.1 9.0 117 336-461 17-138 (250)
271 KOG3098 Uncharacterized conser 96.9 0.068 1.5E-06 52.3 17.0 143 109-252 245-410 (461)
272 PF03092 BT1: BT1 family; Int 96.9 0.013 2.8E-07 57.9 12.2 123 136-258 252-382 (433)
273 TIGR00939 2a57 Equilibrative N 96.9 0.035 7.7E-07 54.6 15.1 112 140-252 308-430 (437)
274 TIGR00939 2a57 Equilibrative N 96.7 0.1 2.2E-06 51.4 17.0 100 145-249 51-156 (437)
275 PF05631 DUF791: Protein of un 96.6 0.084 1.8E-06 49.4 14.4 57 331-388 44-100 (354)
276 TIGR00805 oat sodium-independe 96.5 0.0022 4.7E-08 66.5 4.0 59 336-394 47-105 (633)
277 KOG3880 Predicted small molecu 96.5 0.0098 2.1E-07 53.8 7.2 138 141-285 64-203 (409)
278 PF03137 OATP: Organic Anion T 96.4 0.00091 2E-08 67.5 0.0 155 102-256 303-514 (539)
279 PF06779 DUF1228: Protein of u 96.3 0.041 9E-07 39.8 8.1 52 335-387 6-57 (85)
280 TIGR00880 2_A_01_02 Multidrug 96.1 0.008 1.7E-07 48.5 4.5 87 363-458 4-91 (141)
281 KOG3626 Organic anion transpor 95.9 0.043 9.4E-07 56.4 9.3 153 104-256 392-649 (735)
282 KOG4830 Predicted sugar transp 95.9 0.0014 3E-08 57.5 -1.3 215 108-376 21-256 (412)
283 PF01770 Folate_carrier: Reduc 95.8 0.079 1.7E-06 51.0 9.9 103 137-241 283-387 (412)
284 PF01733 Nucleoside_tran: Nucl 95.7 0.0036 7.9E-08 58.7 0.6 109 143-251 186-305 (309)
285 KOG2601 Iron transporter [Inor 91.9 2.2 4.8E-05 40.3 10.7 167 106-272 29-217 (503)
286 PF05978 UNC-93: Ion channel r 91.4 2.9 6.4E-05 34.5 10.1 86 362-457 42-128 (156)
287 TIGR00769 AAA ADP/ATP carrier 91.0 18 0.0004 36.1 18.8 76 198-273 270-346 (472)
288 KOG3880 Predicted small molecu 90.2 0.33 7.1E-06 44.3 3.6 137 109-252 256-400 (409)
289 PF01733 Nucleoside_tran: Nucl 90.0 0.093 2E-06 49.3 0.1 21 361-381 186-206 (309)
290 KOG0637 Sucrose transporter an 90.0 0.8 1.7E-05 44.4 6.2 127 143-271 336-486 (498)
291 KOG3810 Micronutrient transpor 89.8 6.5 0.00014 37.0 11.6 133 142-279 274-419 (433)
292 KOG1479 Nucleoside transporter 89.7 3.4 7.4E-05 39.7 10.1 111 138-250 281-399 (406)
293 KOG4332 Predicted sugar transp 87.8 9.5 0.00021 34.5 10.8 137 141-277 284-427 (454)
294 PF13000 Acatn: Acetyl-coenzym 86.3 6.2 0.00013 39.1 9.7 65 197-261 408-472 (544)
295 TIGR00926 2A1704 Peptide:H+ sy 85.4 6.1 0.00013 41.3 9.9 51 337-387 3-54 (654)
296 PRK03612 spermidine synthase; 84.9 11 0.00024 38.3 11.4 57 327-383 20-76 (521)
297 COG0477 ProP Permeases of the 84.2 19 0.0004 32.7 12.1 52 335-387 16-69 (338)
298 PF07857 DUF1632: CEO family ( 83.2 19 0.00042 32.4 10.8 49 326-374 183-235 (254)
299 PF02535 Zip: ZIP Zinc transpo 81.3 43 0.00094 31.3 13.4 30 197-226 263-293 (317)
300 PF03219 TLC: TLC ATP/ADP tran 79.5 73 0.0016 32.1 19.6 79 197-275 285-364 (491)
301 PRK00293 dipZ thiol:disulfide 78.2 88 0.0019 32.3 21.9 31 355-385 323-353 (571)
302 PF02990 EMP70: Endomembrane p 77.9 74 0.0016 32.4 14.3 26 363-388 303-328 (521)
303 PF07672 MFS_Mycoplasma: Mycop 77.2 16 0.00035 32.9 8.2 104 142-246 144-258 (267)
304 COG5336 Uncharacterized protei 76.4 13 0.00028 28.1 6.1 31 146-176 49-80 (116)
305 COG4262 Predicted spermidine s 76.3 72 0.0016 30.3 18.2 150 128-279 31-189 (508)
306 PF06912 DUF1275: Protein of u 75.3 55 0.0012 28.5 16.1 43 226-269 158-200 (209)
307 PRK10263 DNA translocase FtsK; 72.9 44 0.00094 37.5 11.5 22 241-262 142-163 (1355)
308 PF02694 UPF0060: Uncharacteri 68.2 13 0.00028 28.1 4.6 52 139-190 54-105 (107)
309 COG1230 CzcD Co/Zn/Cd efflux s 68.2 1E+02 0.0022 28.6 13.7 155 101-266 22-191 (296)
310 KOG2765 Predicted membrane pro 67.2 60 0.0013 30.9 9.6 32 142-175 189-220 (416)
311 TIGR00844 c_cpa1 na(+)/h(+) an 66.4 1.9E+02 0.0041 31.0 25.1 37 234-270 105-141 (810)
312 PF05255 UPF0220: Uncharacteri 66.2 54 0.0012 27.4 8.4 59 222-280 14-78 (166)
313 KOG3814 Signaling protein van 65.2 1.3E+02 0.0028 28.6 12.1 12 193-204 204-215 (531)
314 PRK02237 hypothetical protein; 64.1 22 0.00047 27.0 5.1 52 139-190 56-107 (109)
315 KOG0055 Multidrug/pheromone ex 63.5 2.6E+02 0.0056 31.6 17.1 37 99-135 659-695 (1228)
316 KOG1237 H+/oligopeptide sympor 61.9 1.3E+02 0.0029 31.0 12.1 64 193-256 457-520 (571)
317 PF03596 Cad: Cadmium resistan 59.4 1.2E+02 0.0025 26.2 9.5 30 247-276 43-72 (191)
318 PF03706 UPF0104: Uncharacteri 58.3 1.5E+02 0.0033 27.2 15.6 51 135-185 23-73 (294)
319 TIGR00927 2A1904 K+-dependent 57.1 62 0.0013 35.0 8.7 49 123-173 952-1000(1096)
320 KOG3574 Acetyl-CoA transporter 56.8 73 0.0016 30.8 8.3 135 126-262 287-437 (510)
321 PF11947 DUF3464: Protein of u 51.3 48 0.001 27.2 5.6 50 193-245 96-145 (153)
322 KOG4830 Predicted sugar transp 47.1 45 0.00098 30.1 5.2 139 105-244 202-345 (412)
323 COG2233 UraA Xanthine/uracil p 46.0 2.6E+02 0.0057 27.7 10.6 121 106-228 18-139 (451)
324 PF03741 TerC: Integral membra 45.7 1.9E+02 0.0041 24.6 17.5 59 209-269 11-69 (183)
325 KOG2601 Iron transporter [Inor 44.5 1.6E+02 0.0035 28.5 8.5 73 320-392 26-98 (503)
326 PF12805 FUSC-like: FUSC-like 42.2 1.8E+02 0.0039 26.8 8.8 16 193-208 22-37 (284)
327 COG1268 BioY Uncharacterized c 40.9 96 0.0021 26.4 6.1 23 146-168 89-111 (184)
328 KOG1307 K+-dependent Ca2+/Na+ 39.0 2.8E+02 0.0062 27.4 9.3 46 123-170 443-488 (588)
329 COG3202 ATP/ADP translocase [E 38.6 4.3E+02 0.0093 26.6 18.6 83 196-278 286-370 (509)
330 TIGR01667 YCCS_YHJK integral m 38.5 3E+02 0.0065 29.3 10.6 53 156-209 40-96 (701)
331 COG1457 CodB Purine-cytosine p 37.6 4.2E+02 0.0091 26.3 17.8 147 220-387 11-158 (442)
332 PF11299 DUF3100: Protein of u 37.5 32 0.00069 30.2 2.7 114 131-251 105-227 (241)
333 COG2119 Predicted membrane pro 37.3 2.6E+02 0.0057 23.8 9.0 76 105-183 101-178 (190)
334 COG1288 Predicted membrane pro 37.2 4.2E+02 0.0091 26.2 12.3 213 59-279 239-477 (481)
335 PRK10599 calcium/sodium:proton 37.2 3.8E+02 0.0083 25.8 10.0 27 120-146 238-264 (366)
336 TIGR01666 YCCS hypothetical me 36.6 3.5E+02 0.0076 28.8 10.7 52 157-209 41-96 (704)
337 PF02632 BioY: BioY family; I 36.2 1.7E+02 0.0036 24.0 6.7 26 145-170 59-84 (148)
338 PRK10263 DNA translocase FtsK; 35.9 5.1E+02 0.011 29.7 11.9 21 367-387 141-161 (1355)
339 KOG1278 Endosomal membrane pro 34.3 1.4E+02 0.003 30.2 6.7 31 354-384 356-386 (628)
340 COG1742 Uncharacterized conser 34.1 50 0.0011 24.8 2.9 53 137-189 53-105 (109)
341 KOG3097 Predicted membrane pro 33.6 54 0.0012 30.8 3.7 75 136-210 307-383 (390)
342 COG5336 Uncharacterized protei 33.2 2.2E+02 0.0048 21.7 6.5 51 226-276 38-90 (116)
343 PF13073 DUF3937: Protein of u 33.1 1.1E+02 0.0024 20.5 4.0 38 318-355 2-39 (73)
344 cd02434 Nodulin-21_like_3 Nodu 32.8 3.5E+02 0.0076 23.9 9.0 24 370-393 180-203 (225)
345 PF09527 ATPase_gene1: Putativ 31.6 1.5E+02 0.0032 19.2 6.0 35 147-181 8-43 (55)
346 COG0387 ChaA Ca2+/H+ antiporte 31.5 4.8E+02 0.01 25.1 10.5 31 116-146 233-263 (368)
347 COG3619 Predicted membrane pro 31.2 3.8E+02 0.0082 23.8 19.7 29 231-259 169-197 (226)
348 PF02554 CstA: Carbon starvati 29.8 5.2E+02 0.011 24.9 15.8 31 226-260 52-83 (376)
349 COG3559 TnrB3 Putative exporte 29.2 5.7E+02 0.012 25.2 14.7 60 318-377 295-364 (536)
350 TIGR03644 marine_trans_1 proba 28.2 5.8E+02 0.013 25.0 13.2 30 221-250 315-344 (404)
351 TIGR02230 ATPase_gene1 F0F1-AT 27.9 2.7E+02 0.0058 21.0 6.9 19 240-258 53-71 (100)
352 COG4262 Predicted spermidine s 27.8 5.6E+02 0.012 24.7 9.9 33 350-382 36-68 (508)
353 TIGR02230 ATPase_gene1 F0F1-AT 27.1 2.8E+02 0.006 21.0 6.5 30 152-181 55-85 (100)
354 PF09605 Trep_Strep: Hypotheti 27.1 4E+02 0.0086 22.8 11.6 56 146-206 35-90 (186)
355 PRK11017 codB cytosine permeas 27.0 6E+02 0.013 24.8 17.2 53 221-273 2-55 (404)
356 TIGR00836 amt ammonium transpo 26.7 6.2E+02 0.013 24.8 11.9 48 203-250 284-331 (403)
357 PF05232 BTP: Bacterial Transm 25.9 2.3E+02 0.0049 19.5 6.0 48 122-169 17-64 (67)
358 PF03547 Mem_trans: Membrane t 25.7 6.1E+02 0.013 24.4 15.6 259 146-411 2-330 (385)
359 PRK14199 camphor resistance pr 25.5 3.4E+02 0.0075 21.5 9.5 12 212-223 80-91 (128)
360 PF11947 DUF3464: Protein of u 25.4 3.9E+02 0.0084 22.0 7.8 32 138-169 95-126 (153)
361 KOG1277 Endosomal membrane pro 25.2 1.9E+02 0.0041 28.5 5.8 20 369-388 339-358 (593)
362 PF01914 MarC: MarC family int 24.8 4.6E+02 0.01 22.7 15.1 58 219-276 27-85 (203)
363 PF06638 Strabismus: Strabismu 24.2 4.5E+02 0.0097 26.4 8.2 11 193-203 180-190 (505)
364 KOG2881 Predicted membrane pro 23.9 5.5E+02 0.012 23.3 14.4 13 377-389 260-272 (294)
365 PF02694 UPF0060: Uncharacteri 23.4 91 0.002 23.7 2.7 32 357-388 54-85 (107)
366 COG0730 Predicted permeases [G 22.8 5.6E+02 0.012 23.0 14.8 23 365-387 211-233 (258)
367 PF01810 LysE: LysE type trans 22.8 4.7E+02 0.01 22.1 16.8 8 377-384 153-160 (191)
368 PF08566 Pam17: Mitochondrial 22.7 3.2E+02 0.0068 23.0 6.0 34 130-163 68-103 (173)
369 PRK02237 hypothetical protein; 22.6 1.4E+02 0.003 22.8 3.6 33 357-389 56-88 (109)
370 PF12273 RCR: Chitin synthesis 22.1 44 0.00095 26.6 1.0 9 261-269 2-10 (130)
371 PF11368 DUF3169: Protein of u 22.1 5.8E+02 0.013 22.9 11.6 25 229-253 9-33 (248)
372 PRK14232 camphor resistance pr 22.0 3.9E+02 0.0085 20.9 9.5 14 210-223 69-82 (120)
373 PF04226 Transgly_assoc: Trans 21.8 2.2E+02 0.0048 18.0 5.3 19 259-277 24-42 (48)
374 PF07760 DUF1616: Protein of u 21.6 6.5E+02 0.014 23.3 10.2 60 197-258 22-81 (287)
375 PF11872 DUF3392: Protein of u 21.4 3.8E+02 0.0082 20.5 6.1 31 322-352 50-80 (106)
376 PF10183 ESSS: ESSS subunit of 21.2 1.3E+02 0.0029 22.8 3.4 31 254-284 54-84 (105)
377 PF06570 DUF1129: Protein of u 21.0 5.5E+02 0.012 22.2 10.4 27 255-281 172-198 (206)
378 TIGR00367 K+-dependent Na+/Ca+ 21.0 6.9E+02 0.015 23.3 9.5 58 109-168 175-232 (307)
379 PF07857 DUF1632: CEO family ( 20.7 3.8E+02 0.0083 24.3 6.7 13 135-147 214-226 (254)
No 1
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.9e-35 Score=270.55 Aligned_cols=352 Identities=16% Similarity=0.212 Sum_probs=280.7
Q ss_pred CChhHHHHHHHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHH
Q 011529 99 FPKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVW 178 (483)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 178 (483)
++.|+.++..+++++...++.+..++...|.+.++.++|.+|+|++.+++.+.+.++..+.|.++||.+.|..+..++++
T Consensus 24 ~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLil 103 (448)
T COG2271 24 KRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLIL 103 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHH
Confidence 45677788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhH--HHhhhc
Q 011529 179 WSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFS--PFLIHR 256 (483)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~--~~l~~~ 256 (483)
.++..+++++++ +.+.+.++.++.|+++|..+|++...+.+|++++|||+..++++...++|+.+.|++. +++..+
T Consensus 104 sai~nil~Gfs~--s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~ 181 (448)
T COG2271 104 SAIVNILFGFSP--SLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFH 181 (448)
T ss_pred HHHHHHHHhhhh--HHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhc
Confidence 999999999999 9999999999999999999999999999999999999999999999999999999999 899988
Q ss_pred cCchHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCChhhHH-HhhhcccCCCC-----CcccchhhhhcChhHHHHHHHH
Q 011529 257 FGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKK-LIVSSCASKEP-----VKTIPWGLILSKPPVWALIVSH 330 (483)
Q Consensus 257 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 330 (483)
.+||..|++.++++++..++.++..+++|++..-.+.++.. +..+..+++++ .+..-++.+++||.+|.+.+..
T Consensus 182 ~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~~d~~e~~~~~~~~~~ls~~~i~~~YVL~Nk~iW~la~a~ 261 (448)
T COG2271 182 GGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYRGDPLEIYEEEKENEGLTAWQIFVKYVLKNKLIWLLALAN 261 (448)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCHHHhhcCchhhhhhhccCCCccHHHHHHHHHHcChHHHHHHHHH
Confidence 99999999999999999999998888888764332222111 11110011111 1223356688999999999999
Q ss_pred HHHHHHHHHHHHhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHH
Q 011529 331 FCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFL 410 (483)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (483)
++....-+++..|.|.|+.|..|++...+....+.+-++++.|.+++|+++||+.+.|.. ....+..++..+.+
T Consensus 262 vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~------p~~~i~~~~i~~~~ 335 (448)
T COG2271 262 VFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRG------PMALIFMLLITASL 335 (448)
T ss_pred HHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccc------hHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999998644322 22222222222222
Q ss_pred HHhh--ccchhHHH-HHHHHHhhhhhhhhhchhhhhHhhhccC-cceeeeeee
Q 011529 411 TQLS--HVDSPAMA-VLCMACSQGTDAFSQSGLYSNHQDIAPR-YSVSIISIN 459 (483)
Q Consensus 411 ~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~ 459 (483)
.... ...+.++. +.++.++....+.. -..-....|..|+ ..|++.|+.
T Consensus 336 ~~~w~~~~~~~~l~~~~l~~iGf~IyGPq-mLiGl~a~e~~pK~AaGtA~Gf~ 387 (448)
T COG2271 336 VLYWLAPNGSYLLDAILLFIIGFLIYGPQ-MLIGLAAAEFVPKKAAGTATGFV 387 (448)
T ss_pred HHHHcCCCccHHHHHHHHHHHHHHHhhHH-HHHHHHHhccccHhhccchhchh
Confidence 2222 22223333 33334444444333 3344444566665 478888743
No 2
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.1e-33 Score=263.21 Aligned_cols=333 Identities=20% Similarity=0.276 Sum_probs=270.5
Q ss_pred ChhHHHHHHHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHH
Q 011529 100 PKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWW 179 (483)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 179 (483)
+..+..+..+.++.|..+.........+|.+.+|+|+|..+.|++.++|.++..++.|+...+.||+.||++++....++
T Consensus 9 ~~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lF 88 (394)
T COG2814 9 KPMWLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALF 88 (394)
T ss_pred ccchHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHH
Confidence 34456677778888888888899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCc
Q 011529 180 SIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGW 259 (483)
Q Consensus 180 ~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~ 259 (483)
.++.+++++++ |++.+++.|++.|+..|..++...++..++.|+++|++++++...+..++.++|.+++.++-+.+||
T Consensus 89 i~~n~l~alAp--~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GW 166 (394)
T COG2814 89 IVSNLLSALAP--SFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGW 166 (394)
T ss_pred HHHHHHHHHhc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhH
Confidence 99999999999 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChhHHHHHHHHHHHHHHHHH
Q 011529 260 PSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFI 339 (483)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (483)
|.+|++.+.+.++..+..+...| |++.++..+.+ ..+..+++|+|.++...+..++...+.+.
T Consensus 167 R~~F~~ia~l~ll~~~~~~~~lP--~~~~~~~~~~~---------------~~~~~~~l~~p~v~~~l~~t~l~~~g~F~ 229 (394)
T COG2814 167 RATFLAIAVLALLALLLLWKLLP--PSEISGSLPGP---------------LRTLLRLLRRPGVLLGLLATFLFMTGHFA 229 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC--CccCCCCCCcc---------------hhHHHHHhcCchHHHHHHHHHHHHcchhh
Confidence 99999999999999888888877 11111111111 01123578999999999999999999999
Q ss_pred HHHhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhccchh
Q 011529 340 LLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSP 419 (483)
Q Consensus 340 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (483)
..+|+.+++++..|++....+++...++++.++|..++|++.|| +.++ .+.....+.....+.+....++.
T Consensus 230 ~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~--------~l~~~~~l~a~~~l~l~~~~~~~ 300 (394)
T COG2814 230 LYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRR--------ALIAALLLLALALLALTFTGASP 300 (394)
T ss_pred hHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchh--------HHHHHHHHHHHHHHHHHHhcchH
Confidence 99999999999999999999999999999999999999999999 5552 22222122222222222333444
Q ss_pred HHHHHHHHHhhhhhhhhhchhhhhHhhhccCcceeeeeeee
Q 011529 420 AMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSVSIISINI 460 (483)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~ 460 (483)
+..+....+.++..............+..|+.++.+.+++.
T Consensus 301 ~~~~~~~~~wg~a~~~~~~~~~~~~a~~~p~~~~~a~sl~~ 341 (394)
T COG2814 301 ALALALLFLWGFAFSPALQGLQTRLARLAPDAADLAGSLNV 341 (394)
T ss_pred HHHHHHHHHHHHHhhhhhhHHHHHhcccCCCchHHHHHHHH
Confidence 44444444433333333444445555555677777766443
No 3
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=2.1e-32 Score=267.93 Aligned_cols=286 Identities=21% Similarity=0.318 Sum_probs=236.4
Q ss_pred ChhHHHHHHHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHH
Q 011529 100 PKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWW 179 (483)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 179 (483)
+.+|..+..+++.+++.+++....+...|.+.+++|++..++|++.+++.+++.+++++.|++.||+|||+++..+.++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~ 83 (412)
T TIGR02332 4 KLFRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLW 83 (412)
T ss_pred eehhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHH
Confidence 34677888889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhh----
Q 011529 180 SIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH---- 255 (483)
Q Consensus 180 ~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~---- 255 (483)
.++.+++++++ +++.+++.|++.|++.+...+....++.|++|+++|++++++++....+|..+++.+++++.+
T Consensus 84 ~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ 161 (412)
T TIGR02332 84 GIASTATMFAT--GPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGL 161 (412)
T ss_pred HHHHHHHHHhc--CHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 99999999988 999999999999999999999999999999999999999999999999999999999998864
Q ss_pred --ccCchHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhc---cc-----CC---CCCc---ccchhhhhc
Q 011529 256 --RFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSS---CA-----SK---EPVK---TIPWGLILS 319 (483)
Q Consensus 256 --~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----~~---~~~~---~~~~~~~~~ 319 (483)
..|||+.|++.++..++..++.++..+|+|++.+...+++++...+. .. .+ ++.+ ...++.++
T Consensus 162 ~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 240 (412)
T TIGR02332 162 MALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWLDEEDKKALKEMIDNDQLTLEQPEGAFAHAAMPQRSMLREIF- 240 (412)
T ss_pred CCccchhHHHHHHHHHHHHHHHHHhhccCCCcccCCCCCHHHHHHHHHHHHhccccccccccccccccccHHHHHHHhc-
Confidence 36999999998888877666666666666644321112111111000 00 00 0000 11234443
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHhhHHHHHHH-hCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcC
Q 011529 320 KPPVWALIVSHFCHNWGTFILLTWMPTYYNQV-LHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKG 388 (483)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~ 388 (483)
+|.+|...+..++.....+.+.+|+|.++++. .|++..+++.+.....++.+++.++.|+++||+++|+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~ 310 (412)
T TIGR02332 241 TPAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERK 310 (412)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccH
Confidence 67888888888888888999999999999882 3678888899999999999999999999999998763
No 4
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=6.7e-32 Score=263.35 Aligned_cols=329 Identities=16% Similarity=0.190 Sum_probs=247.2
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHH
Q 011529 101 KRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWS 180 (483)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 180 (483)
++|..+..+.++.+..........+.+|.+.+++|.|+.++|++.+.+.++..+++++.|++.||+|||+++..+.++.+
T Consensus 6 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 85 (390)
T PRK03545 6 VAWLRVVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFI 85 (390)
T ss_pred cchHHHHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 34544555555444444444455667899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCch
Q 011529 181 IATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWP 260 (483)
Q Consensus 181 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~ 260 (483)
++++.+.+++ +++.+++.|+++|++.+...+...+++.|++|+++|++++|+...+..+|..++|++++.+.++.|||
T Consensus 86 ~~~~~~~~~~--~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~ 163 (390)
T PRK03545 86 ASHVLSALAW--NFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWR 163 (390)
T ss_pred HHHHHHHHhc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHH
Confidence 9999999998 99999999999999998888999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChhHHHHHHHHHHHHHHHHHH
Q 011529 261 SVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFIL 340 (483)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (483)
+.|++.+++.++..+..+...|+.+++++ +. ..+.++.+|+|.++...+..++........
T Consensus 164 ~~f~~~~~~~~l~~~~~~~~~~~~~~~~~---~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (390)
T PRK03545 164 TTFLAIGGGALITLLLLIKLLPLLPSEHS---GS----------------LKSLPLLFRRPALVSLYLLTVVVVTAHFTA 224 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCCCc---ch----------------HHHHHHHHhCcHHHHHHHHHHHHHHHHHHH
Confidence 99999988887766555554444322111 00 112456788998887776666666666667
Q ss_pred HHhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhccchhH
Q 011529 341 LTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPA 420 (483)
Q Consensus 341 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (483)
..+++.++++..|++..+.+.+.+...++.++++++.+++.||+++|. ......+........ ....++.+
T Consensus 225 ~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~--------~~~~~~~~~~~~~~l-~~~~~~~~ 295 (390)
T PRK03545 225 YSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGF--------LLIAIALLLVCLLLL-LPAANSEW 295 (390)
T ss_pred HHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhH--------HHHHHHHHHHHHHHH-HHHhchHH
Confidence 788888988878999999999999999999999999999999998662 111111111111111 11223333
Q ss_pred HHHHHHHHhhhhhhhhhchhhhhHhhhccCcceeeeeee
Q 011529 421 MAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSVSIISIN 459 (483)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 459 (483)
..+.+..+.+.......+.......+..|+.+++++|..
T Consensus 296 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 334 (390)
T PRK03545 296 HLSVLSIFWGIAIMCIGLAMQVKVLKLAPDATDVAMALF 334 (390)
T ss_pred HHHHHHHHHHHHHhcchHHHHHHHHHhCCCcHHHHHHHH
Confidence 333333222222233334455666677778888877733
No 5
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=100.00 E-value=7.9e-32 Score=269.03 Aligned_cols=362 Identities=31% Similarity=0.526 Sum_probs=276.9
Q ss_pred cCChhHHHHHHHHHHHHHHhhhhhhhHHhhhhhhh----------------------hcCCChhhHHHHHHHHHHHHHHH
Q 011529 98 EFPKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSA----------------------EFNWNPATVGLIQSSFFWGYLLT 155 (483)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~g~s~~~~g~~~~~~~~~~~~~ 155 (483)
..+.+|.+..+++++..+.+.++..++...+.+.+ +++++..+.|++.+.+.+++.++
T Consensus 13 ~~~~r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~ 92 (465)
T TIGR00894 13 FCSFRLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGALQGLILSSHFYGQIII 92 (465)
T ss_pred ccCcHHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHHhhHHHHHHHHHHHHH
Confidence 45667888888888899999999999988887766 78999999999999999999999
Q ss_pred HhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHH
Q 011529 156 QIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALV 235 (483)
Q Consensus 156 ~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 235 (483)
+++.|+++||+|+|+++..+.++.+++.+++.+....+++.+++.|+++|++.+...+....++.|++|+++|++++++.
T Consensus 93 ~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 172 (465)
T TIGR00894 93 QIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGMS 172 (465)
T ss_pred HcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHHH
Confidence 99999999999999999999999888887765543226788999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHhhHHHhhhcc-CchHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCC--CCCccc
Q 011529 236 YSGMYLGSVTGLAFSPFLIHRF-GWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASK--EPVKTI 312 (483)
Q Consensus 236 ~~~~~~g~~~g~~~~~~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 312 (483)
..+..+|.+++|.+++.+.+.. +||+.|++.+++.++..++++...+++|++++..++++++...+..+.+ +.....
T Consensus 173 ~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 252 (465)
T TIGR00894 173 TSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHPCISKFEKKYINSSLQGQKGSTRQSL 252 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccCCCCCHHHHHHHHhhcccccCCCCCCC
Confidence 9999999999999999999884 9999999999888877777776666665544333333322222111111 112244
Q ss_pred chhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcCCchh
Q 011529 313 PWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVT 392 (483)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~~~~~ 392 (483)
+++++++++.+|...+..++.....+.+.+|+|.|+++.+|++..+.++..++..++.+++.++.|++.||+++|+....
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~ 332 (465)
T TIGR00894 253 PIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSL 332 (465)
T ss_pred CHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcH
Confidence 68899999999999999999999999999999999999899999999999999999999999999999999987654332
Q ss_pred H-HHHHHHHHHHHHHHHHHHHhhc-cchhHHHHHHHHHhhhhhhhhhchhhhhHhhhccCcceeeeeee
Q 011529 393 T-VRKIMQSIGFLGPAFFLTQLSH-VDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSVSIISIN 459 (483)
Q Consensus 393 ~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 459 (483)
. .++....++..+.......... ....+..+.++.++.+......+.......+..|+..|.+.|+.
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 401 (465)
T TIGR00894 333 TAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAPRFLGFIKGIT 401 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcChhHHHHHHHHH
Confidence 2 1222222222222222211111 22333333344444444444444455556677788888888744
No 6
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9.6e-32 Score=261.27 Aligned_cols=341 Identities=40% Similarity=0.745 Sum_probs=301.4
Q ss_pred hhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhcccHHHHHHHHHHHhhhhhc
Q 011529 131 SAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGV 210 (483)
Q Consensus 131 ~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~ 210 (483)
..+++++..+.+++.+.+..|+++++++.|+++||+|.|+++..+.++.++++++..++...+++.+++.|+++|++.+.
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~ 144 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGV 144 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhH
Confidence 34688999999999999999999999999999999999999999999999999999888766778889999999999999
Q ss_pred chhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhc-cCchHHHHHHHHHHHHHHHHHHHhccCCCCCCC
Q 011529 211 AMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR-FGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDP 289 (483)
Q Consensus 211 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (483)
.+|+...+..+|.|++||++..++...+..+|.+++-+++|++.+. +||+..|++.+++.++..++++.+..|+|.+++
T Consensus 145 ~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h~ 224 (466)
T KOG2532|consen 145 LFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSKHP 224 (466)
T ss_pred HHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCcccCC
Confidence 9999999999999999999999999999999999999999999998 999999999999999999999999999988887
Q ss_pred CCChhhHHHhhhcccCCCCC--cccchhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcchhhHHhHHHH
Q 011529 290 QLRPAEKKLIVSSCASKEPV--KTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPW 367 (483)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 367 (483)
...++|.+.+.+.+.+++.. ...||+++++++.+|...+..++...+.+.+.++.|.|+++.+|++..+.|++.++..
T Consensus 225 ~is~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~ 304 (466)
T KOG2532|consen 225 NISEKELKYIEKGKSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPF 304 (466)
T ss_pred CCCHHHHHHHHhcccccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHH
Confidence 77777777666655544443 4789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhccc--hhHHHHHHHHHhhhhhhhhhchhhhhHh
Q 011529 368 LTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVD--SPAMAVLCMACSQGTDAFSQSGLYSNHQ 445 (483)
Q Consensus 368 ~~~~i~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (483)
+.+.+..+++|.++||..+|.+.....++..-.++..+.++.+..+...+ ..+..+.++.+..+..+...+.......
T Consensus 305 l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~ 384 (466)
T KOG2532|consen 305 LAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYKNHQ 384 (466)
T ss_pred HHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHhhhh
Confidence 99999999999999999887777888889999999988888888777655 4445667777777777788888888887
Q ss_pred hhccCcceeeeeeeec--CCCCceeEEe
Q 011529 446 DIAPRYSVSIISINIL--RAPGSHCILC 471 (483)
Q Consensus 446 ~~~~~~~g~~~g~~~~--~~~g~~~~~~ 471 (483)
+..|++.+..+|+.+. ...|+..|..
T Consensus 385 ~~apq~a~~l~g~~~~~~~~~~~~~P~~ 412 (466)
T KOG2532|consen 385 DIAPQHAGFVMGIINFVGALAGFIAPLL 412 (466)
T ss_pred hccchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8789999998885433 3444444443
No 7
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=1.3e-31 Score=264.61 Aligned_cols=282 Identities=17% Similarity=0.236 Sum_probs=228.3
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHH
Q 011529 102 RWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSI 181 (483)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 181 (483)
++..+...++..+..+++...++..+|.+.+++|+|..+.|++.+.+.++..+++++.|++.||+|||+++.++.++.++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~ 100 (434)
T PRK11663 21 RRHILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGI 100 (434)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHH
Confidence 44566667778888888888889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchH
Q 011529 182 ATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPS 261 (483)
Q Consensus 182 ~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~ 261 (483)
+.+++.+.+ +++.+++.|++.|++.+...+...+++.+++|+++|++++++.+.+..+|..++|.+.+++.+.+|||+
T Consensus 101 ~~~~~~~~~--~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~ 178 (434)
T PRK11663 101 INILFGFSS--SLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRY 178 (434)
T ss_pred HHHHHHHHh--HHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHH
Confidence 999998888 899999999999999999899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCCCCCCC-hhhHHHhhhc-cc-CCCCCcccc-h-hhhhcChhHHHHHHHHHHHHHH
Q 011529 262 VFYSFGSLGTVWFTVWLSKAHSSPAEDPQLR-PAEKKLIVSS-CA-SKEPVKTIP-W-GLILSKPPVWALIVSHFCHNWG 336 (483)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~-~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~ 336 (483)
.|++.+++.++..+...+..+++++...... .+.++...+. .+ ..++....+ + +..++++.+|...+..++....
T Consensus 179 ~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (434)
T PRK11663 179 GMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRHDALELAQQQEGAGLSRKEILTKYVLLNPYIWLLSFSYVLVYVV 258 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccccccccccchhccccCCChhhhHHHHHhcChHHHHHHHHHHHHHHH
Confidence 9999887776655544444454433211000 0000000000 00 000000111 1 1256788899888888877778
Q ss_pred HHHHHHhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHh
Q 011529 337 TFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLV 385 (483)
Q Consensus 337 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g 385 (483)
...+..|+|.|+++.+|++..+++...+...+++++++++.|++.||+.
T Consensus 259 ~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~ 307 (434)
T PRK11663 259 RAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLF 307 (434)
T ss_pred HHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhc
Confidence 8888899999998878999999999999999999999999999999994
No 8
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=100.00 E-value=3.5e-31 Score=265.51 Aligned_cols=285 Identities=15% Similarity=0.167 Sum_probs=238.5
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHH
Q 011529 101 KRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWS 180 (483)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 180 (483)
++|..+..++++.++...+.+.++..+|.+.+++|.+..+.+|+.+.+.++..++.+++|+++||+|||+++.++.++..
T Consensus 3 ~~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~ 82 (495)
T PRK14995 3 RQWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFG 82 (495)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 45778889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhc-CCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCc
Q 011529 181 IATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWV-PVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGW 259 (483)
Q Consensus 181 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~ 259 (483)
++.+++++++ +++.++++|+++|++.+...+.....+.+.+ |+++|++++|+......+|..+||.+++++.++.||
T Consensus 83 ~~~~~~~~a~--~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gw 160 (495)
T PRK14995 83 LASLAAAFSP--TASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYW 160 (495)
T ss_pred HHHHHHHHcC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCh
Confidence 9999999998 9999999999999999988888888887776 678999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccCCCCCCCC-CChhhHH-----------Hhhhc-------------------------
Q 011529 260 PSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQ-LRPAEKK-----------LIVSS------------------------- 302 (483)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-----------~~~~~------------------------- 302 (483)
|+.|++...+.++..++..+..|++++++.+ .+..... ...+.
T Consensus 161 r~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~ 240 (495)
T PRK14995 161 GSVFLINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFI 240 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHH
Confidence 9999998887777766666666654332211 1110000 00000
Q ss_pred -ccCCCCCcccchhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHH
Q 011529 303 -CASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIA 381 (483)
Q Consensus 303 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~ 381 (483)
.+...+.+..+ .+++|+|.++...+..++......+...++|.|+++.+|+++.++|+......++..++.++.|++.
T Consensus 241 ~~e~~~~~p~~~-~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~ 319 (495)
T PRK14995 241 RTQLAASRPMID-MRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILV 319 (495)
T ss_pred HHHhcCCCCCcC-HHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00001111222 2578899988888888888888888888999999999999999999999999999999999999999
Q ss_pred HHHhhcC
Q 011529 382 DTLVSKG 388 (483)
Q Consensus 382 dr~g~~~ 388 (483)
||+++|+
T Consensus 320 ~r~g~~~ 326 (495)
T PRK14995 320 SRLGLRL 326 (495)
T ss_pred HHcCchH
Confidence 9999874
No 9
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=3.7e-32 Score=271.04 Aligned_cols=286 Identities=17% Similarity=0.187 Sum_probs=231.6
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHH
Q 011529 102 RWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSI 181 (483)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 181 (483)
.+..+..+++++++.+.++..+++..|.+.+++|++..+.|++.+.+.+++.+++++.|+++||+|+|+++..+.++.++
T Consensus 27 ~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~ 106 (467)
T PRK09556 27 FMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAI 106 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHH
Confidence 55667788888889999999999999999999999999999999999999999999999999999999999888888777
Q ss_pred HHHHhhh-----hhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhc
Q 011529 182 ATALTPV-----AAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR 256 (483)
Q Consensus 182 ~~~~~~~-----~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 256 (483)
+.+.+++ ++ +++.+++.|++.|++.+...+...+++.+++|+++|++++|+.+.+..+|.++++.+..++.+.
T Consensus 107 ~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~ 184 (467)
T PRK09556 107 CMLGFGASLGSGSV--SLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANY 184 (467)
T ss_pred HHHHHHHHHhcccc--hHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHh
Confidence 7665554 45 8999999999999999999999999999999999999999999999999999999988777665
Q ss_pred c---CchHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCChhhH-HHh--hhcccC-CCCCc-ccc-hhhhhcChhHHHHH
Q 011529 257 F---GWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEK-KLI--VSSCAS-KEPVK-TIP-WGLILSKPPVWALI 327 (483)
Q Consensus 257 ~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~-~~~~~-~~~-~~~~~~~~~~~~~~ 327 (483)
. +|+..|.+.+++.++..++.++..++.|++.+..+.++. +.. .++... +++.. ... .+..+++|.+|...
T Consensus 185 ~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 264 (467)
T PRK09556 185 FFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWGKAEEIFGEPISEEDKETESTDMTKWQIFVEYVLKNPVIWLLC 264 (467)
T ss_pred hccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCCChhhcccCccchhhhccccccCcHHHHHHHHHHcChHHHHHH
Confidence 3 599988888888777666666665555443221111110 000 000000 00000 011 22368999999999
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 011529 328 VSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGL 389 (483)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~~ 389 (483)
+..++......+...|+|.|+++.+|++..++++......++.+++.++.|+++||+++|+.
T Consensus 265 ~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~ 326 (467)
T PRK09556 265 FANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRA 326 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCch
Confidence 99888888888889999999998899999999999999999999999999999999998853
No 10
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=100.00 E-value=7.6e-31 Score=251.72 Aligned_cols=319 Identities=13% Similarity=0.076 Sum_probs=228.2
Q ss_pred hhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhcccHHH
Q 011529 117 NMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPF 196 (483)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (483)
......+++.+|.+.+++|+|..+.|++.+.+.+++.+++++.|+++||+|||+++..+.+....+.+.....+ +++.
T Consensus 4 ~~~~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~~ 81 (368)
T TIGR00903 4 QAIWVTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPF--NYEW 81 (368)
T ss_pred hHHHHHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhc--cHHH
Confidence 44566788899999999999999999999999999999999999999999999877655555544433223335 8999
Q ss_pred HHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHHH
Q 011529 197 LLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTV 276 (483)
Q Consensus 197 l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~ 276 (483)
+++.|++.|++.+. .......+.|++|+++|++++++.+.+..+|.++++.+++++.+++|||+.|++.+++.++..++
T Consensus 82 l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~ 160 (368)
T TIGR00903 82 LLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIIL 160 (368)
T ss_pred HHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHH
Confidence 99999999999985 45666667999999999999999999999999999999999999999999999988888877777
Q ss_pred HHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCc
Q 011529 277 WLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNL 356 (483)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 356 (483)
.++..||+|+.+++..+. ++ ...++++++++|.+|...+..++.....+++.+|+|.|+++ .|++.
T Consensus 161 ~~~~lp~~p~~~~~~~~~-~~------------~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s~ 226 (368)
T TIGR00903 161 VLAALPALPFQAAEGFGF-KD------------AVKEFGALAGRKDLWIIGAILGFGVALFDNLAIWLEAALRP-AGLED 226 (368)
T ss_pred HHHHcCCCCCCCCCCcch-HH------------HHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCh
Confidence 777777655432211100 00 01246788999999999999999999999999999999987 68876
Q ss_pred chhhHHhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHhhhhhhhh
Q 011529 357 TESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFS 436 (483)
Q Consensus 357 ~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (483)
. .+....+..+.+.++ .+++.||..||+... .......+..+...............+.+..+...+....
T Consensus 227 ~-~~~~~~l~~~~g~~g---~~~~~d~~~r~~~r~-----~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 297 (368)
T TIGR00903 227 I-AGDAVALAILAGLIG---VAVIPDRVARAGLRS-----IYIRAAALLIAAFFLALAFELNRLALFAFIGIAGLLMLPA 297 (368)
T ss_pred H-HHHHHHHHHHHHHHH---HHHhhHHhhhhhhHH-----HHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhhhhh
Confidence 4 555555555544444 578888876543111 1111111111111112122222333333333344444444
Q ss_pred hchhhhhHhhhccC-cceeeeeeeec
Q 011529 437 QSGLYSNHQDIAPR-YSVSIISINIL 461 (483)
Q Consensus 437 ~~~~~~~~~~~~~~-~~g~~~g~~~~ 461 (483)
.+.......|..|+ .||++.|+.++
T Consensus 298 ~~~~~~~~~~~~p~~~rgt~~G~~~~ 323 (368)
T TIGR00903 298 YAIIMDWIGKFCDKELHGKAAGAIGF 323 (368)
T ss_pred HHHHHHHHHHhcchhhcCcccchhhH
Confidence 45566777787765 68999985543
No 11
>TIGR00893 2A0114 d-galactonate transporter.
Probab=100.00 E-value=1.8e-31 Score=261.10 Aligned_cols=343 Identities=26% Similarity=0.423 Sum_probs=261.6
Q ss_pred HHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhcc
Q 011529 113 FLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKL 192 (483)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~ 192 (483)
+++.+++...++...|.+.+++|.+..+.+++.+++.++..++.++.|+++||+|||+++..+.++.+++.+++++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~-- 80 (399)
T TIGR00893 3 TVINYLDRANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAG-- 80 (399)
T ss_pred ehHHHHHHHhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHc--
Confidence 345667778888899999999999999999999999999999999999999999999999999999999999999988
Q ss_pred cHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHHHHHHHHH
Q 011529 193 GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTV 272 (483)
Q Consensus 193 ~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~ 272 (483)
+++.+++.|++.|++.+...+...+++.|++|+++|++++++.+....+|..++|.+++.+.+..+|++.|++.+++.++
T Consensus 81 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 160 (399)
T TIGR00893 81 AYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGII 160 (399)
T ss_pred CHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998888877
Q ss_pred HHHHHHHhccCCCCCCCCCChhhHHHhhhc------ccCCCCCcccchhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHH
Q 011529 273 WFTVWLSKAHSSPAEDPQLRPAEKKLIVSS------CASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPT 346 (483)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (483)
..+..+...++++++++...+++++...+. .+++++.+....++.+++|+++...+..++.......+..+.|.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (399)
T TIGR00893 161 WGVLWLKFIPDPPQKAKWLTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLTWFPT 240 (399)
T ss_pred HHHHhhheecCCCCccccCCHHHHhhcchhhccccccccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 766666555555443322222221111110 11112223345677889999999999999999999999999999
Q ss_pred HHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHH
Q 011529 347 YYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCM 426 (483)
Q Consensus 347 ~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (483)
|+++.+|.++.+.+++.+...++.+++.++.|++.||+++|+....... .....+.+............+..+..+...
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (399)
T TIGR00893 241 YLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFAR-KTAIIAGLVLSLLMFATNYVNIPYAALALV 319 (399)
T ss_pred HHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHH-HHHHHHHHHHHHHHHHhccchhHHHHHHHH
Confidence 9999899999999999999999999999999999999998862221111 111111111122222222222333333333
Q ss_pred HHhhhhhhhhhchhhhhHhhhcc-Ccceeeeeee
Q 011529 427 ACSQGTDAFSQSGLYSNHQDIAP-RYSVSIISIN 459 (483)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~ 459 (483)
.++.+..+ ..+.......+..| +++|+++|+.
T Consensus 320 ~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~ 352 (399)
T TIGR00893 320 ALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLI 352 (399)
T ss_pred HHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHH
Confidence 44443333 45566677777654 5688888744
No 12
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=100.00 E-value=2.1e-30 Score=258.20 Aligned_cols=347 Identities=14% Similarity=0.103 Sum_probs=244.9
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHH
Q 011529 101 KRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWS 180 (483)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 180 (483)
++++.+.......+..........+.+|.+.+++|++..+.+++.+.+.+++.+++++.|+++||+|||+++..+.++.+
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~ 112 (476)
T PLN00028 33 PHMRAFHLSWISFFTCFVSTFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTA 112 (476)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHH
Confidence 34455555666666677777778888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhh-----
Q 011529 181 IATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH----- 255 (483)
Q Consensus 181 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~----- 255 (483)
++.++.++++ +++.+++.|++.|++.+.. .....++.+++|+++|++++|+.+...++|..+++.+.+.+..
T Consensus 113 ~~~~~~~~~~--s~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~ 189 (476)
T PLN00028 113 PAVFCMSLVS--SATGFIAVRFFIGFSLATF-VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDA 189 (476)
T ss_pred HHHHHHHHhc--CHHHHHHHHHHHHHHHHhh-HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9998888888 8999999999999988764 4456788999999999999999988888888777766654432
Q ss_pred ----ccCchHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChhHHHHHHHHH
Q 011529 256 ----RFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHF 331 (483)
Q Consensus 256 ----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (483)
..|||+.|++.+++.++..+..++..++.|+... ++.++ +.+.++......+++.++++++|.+.+..+
T Consensus 190 ~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~~~~--~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (476)
T PLN00028 190 GAPSFTAWRIAFFVPGLLHIIMGILVLTLGQDLPDGNY--RELKK-----SGTMPKDSFSKVLRYGVTNYRTWILALTYG 262 (476)
T ss_pred CCcchhhhHHHHHHHHHHHHHHHHHHHHHcCcCCCCch--hhHHh-----cCccccccHHHHHHHHHcCchhHHHHHHHH
Confidence 2589999999998888776666665544432210 00000 000001111123556678899888877777
Q ss_pred HHHHHHHHHHHhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHH
Q 011529 332 CHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLT 411 (483)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (483)
+.......+..++|.|+.+.+|++..+++.+.++..++.+++++++|+++||+++|+.... ++........+.+....
T Consensus 263 ~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~--r~~~~~~~~~l~~i~~~ 340 (476)
T PLN00028 263 YSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRG--RLWALWIVQTLGGVFCI 340 (476)
T ss_pred HHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcch--hHHHHHHHHHHHHHHHH
Confidence 6666667778899999988789999999999999999999999999999999997642211 12222222222222222
Q ss_pred HhhccchhHHHHHHHHHhhhhhhhhhchhhhhHhhhccCcceeeeeee
Q 011529 412 QLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSVSIISIN 459 (483)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 459 (483)
.....++....+..+.+.........+.......+..|+++|++.|+.
T Consensus 341 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 388 (476)
T PLN00028 341 WLGRANSLGAAIVVMILFSIFVQAACGATFGIVPFVSRRSLGVISGLT 388 (476)
T ss_pred HhcccchHHHHHHHHHHHHHHHHHhhhhhcccCcccChhhchhhhhhh
Confidence 222222222222222222222222233344445566778888888854
No 13
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=100.00 E-value=6.2e-30 Score=249.03 Aligned_cols=263 Identities=16% Similarity=0.218 Sum_probs=215.1
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHH
Q 011529 102 RWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSI 181 (483)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 181 (483)
.|+.+..+..+.+..........+.+|.+.+++|.++.++++..+++.++..+++++.|++.||+|||+++..+.++.++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~ 97 (394)
T PRK10213 18 NWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTL 97 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHH
Confidence 55555555555555555555566678899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchH
Q 011529 182 ATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPS 261 (483)
Q Consensus 182 ~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~ 261 (483)
+.+++.+.+ +++.+++.|++.|++.+...+...+++.|++|+++|++++++.....++|..++|.+++.+.+.+|||+
T Consensus 98 ~~~~~~~~~--~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~ 175 (394)
T PRK10213 98 SCLLVSFAN--SFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRN 175 (394)
T ss_pred HHHHHHHHC--hHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHH
Confidence 999988887 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChhHHHHHHHHHHHHHHHHHHH
Q 011529 262 VFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILL 341 (483)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (483)
.|++.+++.++..+......|+++++++ +. ..+.++.+|+|.++...+..++.........
T Consensus 176 ~f~~~~~l~~~~~l~~~~~~p~~~~~~~---~~----------------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 236 (394)
T PRK10213 176 VFNAAAVMGVLCIFWIIKSLPSLPGEPS---HQ----------------KQNTFRLLQRPGVMAGMIAIFMSFAGQFAFF 236 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCcccc---cc----------------hhHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999887766655444443443221110 00 1123467889999887776666666666666
Q ss_pred HhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHh
Q 011529 342 TWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLV 385 (483)
Q Consensus 342 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g 385 (483)
+++++++.+++|+++.+.+.+....+++.+++.++.+++.||.+
T Consensus 237 ~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~ 280 (394)
T PRK10213 237 TYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSV 280 (394)
T ss_pred HHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 77644444458999999999999999999999999999999954
No 14
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=2.2e-30 Score=264.43 Aligned_cols=185 Identities=15% Similarity=0.210 Sum_probs=162.0
Q ss_pred CChhHHHHHHHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHH
Q 011529 99 FPKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVW 178 (483)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 178 (483)
.+.+|.++.++.++.+..+++...++..+|.+.+++|++..+.+++.+++.++.+++.+++|+++||+|||++++++.++
T Consensus 162 ~~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil 241 (742)
T TIGR01299 162 GRFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSV 241 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 35677777888888888888888899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhc--
Q 011529 179 WSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR-- 256 (483)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-- 256 (483)
.+++.+++++++ +++.++++|++.|++.++..+...+++.|++|+++|++.+++.+.+..+|.++++.++..+...
T Consensus 242 ~~i~~ll~afa~--s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G 319 (742)
T TIGR01299 242 NGFFAFFSSFVQ--GYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYG 319 (742)
T ss_pred HHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999888 8999999999999999999999999999999999999999999999999999999888776643
Q ss_pred -----------cCchHHHHHHHHHHHHHHHHHHHhccCCCC
Q 011529 257 -----------FGWPSVFYSFGSLGTVWFTVWLSKAHSSPA 286 (483)
Q Consensus 257 -----------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (483)
.+||+.+++.++..++.. +..++.|+.|+
T Consensus 320 ~~~~~g~~~~~~gWR~l~~i~~lp~ll~l-l~~~~lPESPr 359 (742)
T TIGR01299 320 WSFQMGSAYQFHSWRVFVIVCAFPCVFAI-GALTFMPESPR 359 (742)
T ss_pred chhccccccccccHHHHHHHHHHHHHHHH-HHHHHcCCCHH
Confidence 358888887776655544 34444566543
No 15
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=4.2e-30 Score=252.34 Aligned_cols=336 Identities=21% Similarity=0.252 Sum_probs=249.5
Q ss_pred CChhHHHHHHHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHH
Q 011529 99 FPKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVW 178 (483)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 178 (483)
.+++|..+.++++..++.+++....+...|.+.+++|.++.+.+++.+.+.++..+++++.|+++||+|||+++..+.++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 89 (406)
T PRK11551 10 SSRLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVAL 89 (406)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHH
Confidence 34788888888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccC
Q 011529 179 WSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG 258 (483)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g 258 (483)
..++.+++.+.+ +++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|..+++.+++.+.+..+
T Consensus 90 ~~~~~~~~~~~~--~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 167 (406)
T PRK11551 90 FGLFSLATAQAW--DFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAA 167 (406)
T ss_pred HHHHHHHHHHhc--cHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccC
Confidence 988888888888 899999999999999999999999999999999999999999999999999999999998888899
Q ss_pred chHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhc---ChhHHHHHHHHHHHHH
Q 011529 259 WPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILS---KPPVWALIVSHFCHNW 335 (483)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 335 (483)
|++.|++.+++.++..+......+++++..++..+++.+ ....+..++ .+..+...+..++...
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (406)
T PRK11551 168 WRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGKQR-------------APVLRALFGEGRATATLLLWISYFFTLI 234 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcchhh-------------hhhHHHHhhhhhhhHHHHHHHHHHHHHH
Confidence 999999888776666555555555543321111000000 001111222 2233444444555555
Q ss_pred HHHHHHHhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhc
Q 011529 336 GTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSH 415 (483)
Q Consensus 336 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (483)
..+....+.|.++++ .|+++.+.+.+.+...++.++++++.|++.||+++|+. ... ..+.....+.....
T Consensus 235 ~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~-------~~~--~~~~~~~~~~~~~~ 304 (406)
T PRK11551 235 VLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRV-------VLL--IYAGILASLAALAA 304 (406)
T ss_pred HHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHH-------HHH--HHHHHHHHHHHHHh
Confidence 667778889999988 79999999999999999999999999999999998742 111 11111112222222
Q ss_pred cchhHHHHHHHHHhhhhhhhhhchhhhhHhhhc-cCcceeeeeee
Q 011529 416 VDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIA-PRYSVSIISIN 459 (483)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~ 459 (483)
.+..+...+...+.+.......+.......+.. ++++|++.|+.
T Consensus 305 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~ 349 (406)
T PRK11551 305 APSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAA 349 (406)
T ss_pred cCcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHH
Confidence 223333322222222222333444556666654 45688888744
No 16
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=100.00 E-value=7.9e-30 Score=248.68 Aligned_cols=267 Identities=15% Similarity=0.226 Sum_probs=227.6
Q ss_pred HHHHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHH
Q 011529 106 VVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATAL 185 (483)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 185 (483)
+..+.+..++.......+.+.+|.+.+++|.++.+.+++.+++.++..+++++.|++.||+|||+++..+.++.+++.+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~ 86 (385)
T TIGR00710 7 ALLLGCLSILGPLGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLG 86 (385)
T ss_pred HHHHHHHHHHHHHHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHH
Confidence 33444445566677788888999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHH
Q 011529 186 TPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYS 265 (483)
Q Consensus 186 ~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~ 265 (483)
+.+.+ +++.+++.|++.|++.+...+...+++.|++|+++|++++++.+....+|..++|.+++.+.+..+|++.+++
T Consensus 87 ~~~~~--~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~ 164 (385)
T TIGR00710 87 LALSN--NIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAF 164 (385)
T ss_pred HHHHc--cHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHH
Confidence 88888 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChhHHHHHHHHHHHHHHHHHHHHhhH
Q 011529 266 FGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMP 345 (483)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (483)
.+++.++..+..+...+++++++++.+.++. ...+++.+++|.++...+...+..........+.|
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (385)
T TIGR00710 165 LSLAGILLSALIFFILPETLPYEARIQISTY--------------FETFLLLLKSKMFWGYALIYGASFGGFFAFFSGAP 230 (385)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCcccCCHHHH--------------HHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHcCh
Confidence 8887777666655555544332221111110 12355778899998888777777777788888899
Q ss_pred HHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcC
Q 011529 346 TYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKG 388 (483)
Q Consensus 346 ~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~ 388 (483)
.++++.+|.++.+.+.+.....++.+++.++.+++.||+++|+
T Consensus 231 ~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~ 273 (385)
T TIGR00710 231 FVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKS 273 (385)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH
Confidence 9999889999999999999999999999999999999999874
No 17
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=1.3e-29 Score=250.39 Aligned_cols=269 Identities=14% Similarity=0.142 Sum_probs=209.8
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhHHhhhhhhhhcC---CChhhHH---HHHHHHHHHHHHHHhhHHHHHhhcCCchHHHH
Q 011529 101 KRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFN---WNPATVG---LIQSSFFWGYLLTQIAGGIWADTVGGKAVLGF 174 (483)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~s~~~~g---~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~ 174 (483)
+++..+...+++.++.+++...++...|.+.++++ .+..+.+ .+.+...++..++++++|+++||+|||+++.+
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~ 98 (432)
T PRK10406 19 RRIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLI 98 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHH
Confidence 45556667778889999999999999999999984 5555443 44455556666999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhcccH--------HHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHH
Q 011529 175 GVVWWSIATALTPVAAKLGL--------PFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTG 246 (483)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~--------~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g 246 (483)
+.++++++.+++++++ ++ ..++++|+++|++.|..++...+++.|++|+++|+++.++.+.+...|.+++
T Consensus 99 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~ 176 (432)
T PRK10406 99 SVCMMCFGSLVIACLP--GYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLA 176 (432)
T ss_pred HHHHHHHHHHHHhhcC--CchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHH
Confidence 9999999999998887 54 3688999999999999999999999999999999999999998888888888
Q ss_pred HhhHHHhh--------hccCchHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhh
Q 011529 247 LAFSPFLI--------HRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLIL 318 (483)
Q Consensus 247 ~~~~~~l~--------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (483)
+.+...+. +.+|||++|++.++..++... .....+|.++. +++. . .+..++++++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~-~~~~~~e~~~~-------~~~~----~-----~~~~~~~~l~ 239 (432)
T PRK10406 177 LLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVALW-LRRQLDETSQQ-------ETRA----L-----KEAGSLKGLW 239 (432)
T ss_pred HHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHH-HHhcCCCCchH-------HHhh----h-----cccccHHHHH
Confidence 87665543 257999999987776655432 22222222110 0000 0 0123577888
Q ss_pred cChhHHHHHHHHHHH-HHHHHHHHHhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcC
Q 011529 319 SKPPVWALIVSHFCH-NWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKG 388 (483)
Q Consensus 319 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~ 388 (483)
|+++.+...+...+. ....+.+.+|+|.|+++.+|++..+.+...++..+...++..+.|+++||++||+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~ 310 (432)
T PRK10406 240 RNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRT 310 (432)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchH
Confidence 998888766655443 6667788899999998888999988888888888888888999999999999884
No 18
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.98 E-value=1.3e-30 Score=239.61 Aligned_cols=344 Identities=17% Similarity=0.180 Sum_probs=275.0
Q ss_pred CChhHHHHHHHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHH
Q 011529 99 FPKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVW 178 (483)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 178 (483)
++.+++.+.+..+...+.+..+.++++..+.+.+++|+|+.|.+++.++..+...+..++.|.+.||+|.|++..++.++
T Consensus 9 k~~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l 88 (417)
T COG2223 9 KRIARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLL 88 (417)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHH
Confidence 34456677777888888888889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhc-ccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhcc
Q 011529 179 WSIATALTPVAAK-LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF 257 (483)
Q Consensus 179 ~~~~~~~~~~~~~-~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 257 (483)
..+-++..+++.. .++|.+++++++.|++ |..+......+++++|+|++|.++|+.. .+++|..+...++..++...
T Consensus 89 ~~IP~~~~~~a~~~~~~~~ll~~gll~G~~-GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~ 166 (417)
T COG2223 89 LLIPCLGLAFAVTYPSTWQLLVIGLLLGLA-GASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAF 166 (417)
T ss_pred HHHHHHHHHHHccCCchHHHHHHHHHHhcc-cceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHH
Confidence 9999988887752 2456999999999998 5577888999999999999999999999 99999999999999999988
Q ss_pred C---chHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChhHHHHHHHHHHHH
Q 011529 258 G---WPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHN 334 (483)
Q Consensus 258 g---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (483)
+ |+....+..+..++..+..++...+.++.+...++... ..++.++++++.|.+.+.++..+
T Consensus 167 g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~~---------------~~~~~v~~~~~~W~lsllY~~tF 231 (417)
T COG2223 167 GFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQLP---------------AQLKAVFSNKDTWLLSLLYFATF 231 (417)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccch---------------hHHHHHhcCcchHHHHHHHHHHH
Confidence 8 99999999988888888888887776654222211110 23567889999999999999999
Q ss_pred HHHHHHHHhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhh
Q 011529 335 WGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLS 414 (483)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (483)
.++.++..++|.|+++++|.++.+++.+.....+.+.+.+.++|+++||+|.+|... ........+.......
T Consensus 232 G~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~-------~~f~~~~~~~~~l~~~ 304 (417)
T COG2223 232 GGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTL-------AVFVGMALAAALLSLF 304 (417)
T ss_pred HHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHH-------HHHHHHHHHHHHHHcc
Confidence 999999999999999999999999999999999999999999999999999885322 2221111111111111
Q ss_pred c-----cchhHHHHHHHHHhhhhhhhhhchhhhhHhhhccCcceeeee-eeecCCCCc
Q 011529 415 H-----VDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSVSIIS-INILRAPGS 466 (483)
Q Consensus 415 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g-~~~~~~~g~ 466 (483)
. ..........+.....+.+......+..+....+++.|.+.| +......|+
T Consensus 305 ~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~~~G~v~G~vga~G~lGG 362 (417)
T COG2223 305 LTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPKETGAVTGIVGAIGGLGG 362 (417)
T ss_pred ccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHHhhhhHHHHHHHHhccccc
Confidence 1 133444444444444455555666777777888888888888 334444443
No 19
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.98 E-value=2.6e-29 Score=246.59 Aligned_cols=275 Identities=14% Similarity=0.120 Sum_probs=230.4
Q ss_pred CChhHHHHHHHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHH
Q 011529 99 FPKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVW 178 (483)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 178 (483)
+++.+.....+.+..++..+....+.+.+|.+.+++|.++.+.++..+.+.++..++.++.|+++||+|||+++..+.++
T Consensus 8 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~ 87 (406)
T PRK15402 8 GRQALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAF 87 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHH
Confidence 35566677777778888888888888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccC
Q 011529 179 WSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG 258 (483)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g 258 (483)
.+++.+.+.+.+ +++.+++.|++.|++.+...+...+.+.|.+|+++|.+..++......+|..++|.+++.+.+..+
T Consensus 88 ~~~~~~~~~~~~--~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~ 165 (406)
T PRK15402 88 FILTCLAILLAQ--SIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLP 165 (406)
T ss_pred HHHHHHHHHHHc--cHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 999988888888 899999999999999988888899999999999999999999999999999999999999999899
Q ss_pred chHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChhHHHHHHHHHHHHHHHH
Q 011529 259 WPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTF 338 (483)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (483)
|++.|++.+++.++..+..+...|+++++.++..+. ++ ...+++.++++|.++...+..++......
T Consensus 166 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (406)
T PRK15402 166 WRGMFVLFAALAALSFFGLWRAMPETAGRVGEKLSL-KE------------LGRDYKLVLKNRRFVAGALALGLVSLPLL 232 (406)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhCCCCCccccccccH-HH------------HHHHHHHHHcCcHHHHHHHHHHHHHHHHH
Confidence 999999988888776665555444433221111000 00 02235678899999888877777766666
Q ss_pred HHHHhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcC
Q 011529 339 ILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKG 388 (483)
Q Consensus 339 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~ 388 (483)
....+.|.++++.+|+++.+.+.......++.+++.++.+++.||+++|+
T Consensus 233 ~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~ 282 (406)
T PRK15402 233 AWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRS 282 (406)
T ss_pred HHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH
Confidence 77778899988888999999998888788889999999999999999874
No 20
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.98 E-value=1e-30 Score=251.68 Aligned_cols=335 Identities=24% Similarity=0.420 Sum_probs=250.3
Q ss_pred HHHHHHHhhhhhhhHHhhh-hhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhh
Q 011529 110 FSAFLLCNMDRVNMSIAIL-PMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPV 188 (483)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~-~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 188 (483)
++..++..++.....+.+| .+.+++|.+..+++++.+++.++..+++++.|+++||+|||+++..+.++.+++.++..+
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~ 81 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAF 81 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhh
Confidence 4566777788888889999 799999999999999999999999999999999999999999999999999999666566
Q ss_pred hhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHHHHH
Q 011529 189 AAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGS 268 (483)
Q Consensus 189 ~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~ 268 (483)
++ +.+.+++.|++.|++.+...+...+++.|++|+++|++++++.+....+|..++|.+++.+.+..+||+.|++.++
T Consensus 82 ~~--~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~ 159 (352)
T PF07690_consen 82 AS--NFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAI 159 (352)
T ss_dssp HC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHH
T ss_pred hh--hHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccc
Confidence 56 7889999999999999999999999999999999999999999999999999999999999988999999999999
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCccc-chhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHH
Q 011529 269 LGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTI-PWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTY 347 (483)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (483)
+.++..++.....++++++++..++.+++ .+++.+.. .++.++++|.+|...+..++..........+.|.|
T Consensus 160 ~~~~~~il~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (352)
T PF07690_consen 160 LSLIAAILFILFLPEPPPPRERESPKESE-------SKKPKPLKPGFKSLFKNPVLWILLIAFFLFFFVFSGFSFFLPLY 232 (352)
T ss_dssp HHHHHHHHHHCCC---STTTT--SSTTTT---------HHHCCCH-CTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhHhhhhhhcccccccccccccc-------cccccccccccccccccchhhhhhhhhhHHHHHHHHhhcccchh
Confidence 98888775444444333322222111110 00000112 26677888888766666666667788899999999
Q ss_pred HHHHhCCC-cchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHH
Q 011529 348 YNQVLHFN-LTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCM 426 (483)
Q Consensus 348 ~~~~~g~~-~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (483)
+++.+|++ ..+.+.+..+..+..+++.++.+++.||+++++ ...............+.......+....+...
T Consensus 233 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (352)
T PF07690_consen 233 LQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRR------RLLIAILLLILGALGLLLLPFSSSPVWLIIAL 306 (352)
T ss_dssp CCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHH------HHHHHHHHHHHHHHHHCCSHHHCHHHHHHHHH
T ss_pred hhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHH------HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 88889999 789999999999999999999999999998762 11222222222222222222222333333333
Q ss_pred HHhhhhhhhhhchhhhhHhhhcc-Ccceeeeeee
Q 011529 427 ACSQGTDAFSQSGLYSNHQDIAP-RYSVSIISIN 459 (483)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~ 459 (483)
.+.+...+...+.......+..| +++|++.|+.
T Consensus 307 ~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 340 (352)
T PF07690_consen 307 FLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLF 340 (352)
T ss_dssp HHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 33333555556667777777664 6788888743
No 21
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.97 E-value=1.7e-29 Score=248.07 Aligned_cols=288 Identities=16% Similarity=0.192 Sum_probs=220.4
Q ss_pred CChhHHHHHHHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHH
Q 011529 99 FPKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVW 178 (483)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 178 (483)
.+++|+.+..++++++...++....++..|.+.+++|.+..+.+++.+++.++..+++++.|+++||+|||+++.++.++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~ 86 (405)
T TIGR00891 7 TRAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVL 86 (405)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 35677888889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccC
Q 011529 179 WSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG 258 (483)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g 258 (483)
.+++.+++.+.+ +++.+++.|++.|++.+...+...+++.|++|+++|++++++.+....+|..+++.+++.+.+..+
T Consensus 87 ~~~~~~~~~~~~--~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~ 164 (405)
T TIGR00891 87 FSAGTLACGFAP--GYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWG 164 (405)
T ss_pred HHHHHHHHHHhc--cHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999988888 999999999999999999999999999999999999999999999999999999999999988766
Q ss_pred --chHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCh-hhHHHhhhcccCCCCCccc-------chhhhh-cCh-hHHHH
Q 011529 259 --WPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRP-AEKKLIVSSCASKEPVKTI-------PWGLIL-SKP-PVWAL 326 (483)
Q Consensus 259 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-------~~~~~~-~~~-~~~~~ 326 (483)
||+.|++.++..++..+ .....|++++..++.++ +......++...+++..+. ..+... +++ .+...
T Consensus 165 ~~w~~~f~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (405)
T TIGR00891 165 DGWRALFFISILPIIFALW-LRKNIPEAEDWKEKHAGKALVRTMVDILYGGEHRIANIVMTLAAAMVQSAGKRWPTFVYL 243 (405)
T ss_pred ccHHHHHHHHHHHHHHHHH-HHHhCCCChhHHHHhhhhhhhhhHHHHHhccchhhhhhhhhhhHHhhhhhhhhhHHHHHH
Confidence 99999876655544433 33333333221111000 0000000000000000000 000000 111 12223
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 011529 327 IVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGL 389 (483)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~~ 389 (483)
.+...+..........++|.|+.+.+|++..+.+.+.+...++.+++.++.+++.||+++|+.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~ 306 (405)
T TIGR00891 244 VVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKA 306 (405)
T ss_pred HHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhh
Confidence 333344444555667789999998899999999999999999999999999999999998853
No 22
>PRK03699 putative transporter; Provisional
Probab=99.97 E-value=3.9e-29 Score=244.01 Aligned_cols=268 Identities=15% Similarity=0.208 Sum_probs=222.0
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHH
Q 011529 101 KRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWS 180 (483)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 180 (483)
++++..+.+++..++.+.....++..+|.+.+++|+|..+.+++.+.+.++..+++++.|++.||+|||+++..+.++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~ 83 (394)
T PRK03699 4 NRIKLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMI 83 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 34566777778888888888889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhh-ccCc
Q 011529 181 IATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH-RFGW 259 (483)
Q Consensus 181 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-~~g~ 259 (483)
++.++..+.+ +++.+++.|++.|++.+...+...+++.|++|+++|+++++..+....+|..++|.+.+.+.. ..+|
T Consensus 84 i~~~l~~~~~--~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw 161 (394)
T PRK03699 84 LAVAGLMFSH--SLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEW 161 (394)
T ss_pred HHHHHHHHcc--hHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccH
Confidence 9999888888 899999999999999998888899999999999999999999999999999999999888765 5799
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChhHHHHHHHHHHHHHHHHH
Q 011529 260 PSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFI 339 (483)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (483)
|+.|.+.+++.++..++.+.. +.|+.+++.++++ ++. .+. ..++.++...+..++....++.
T Consensus 162 ~~~f~~~~~~~~~~~~~~~~~--~~p~~~~~~~~~~-----------~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~ 223 (394)
T PRK03699 162 YWVYACIGLVYVAIFILTLFS--EFPALGKHAPKAD-----------KPV----AKE-KWGIGVLFLAIAALLYILAQLT 223 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhc--CCccccccCcccc-----------Ccc----ccc-cCChHHHHHHHHHHHHHHHHHH
Confidence 999998887776655544332 2121111100000 000 011 1246677777777777777888
Q ss_pred HHHhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcC
Q 011529 340 LLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKG 388 (483)
Q Consensus 340 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~ 388 (483)
+..|+|.|+++.+|+++.+.+.+.+...++.++++++.+++.||+++|+
T Consensus 224 ~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~ 272 (394)
T PRK03699 224 FISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQR 272 (394)
T ss_pred HHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhh
Confidence 8999999998889999999999999999999999999999999999885
No 23
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.97 E-value=3.2e-29 Score=248.85 Aligned_cols=286 Identities=16% Similarity=0.235 Sum_probs=218.1
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHH
Q 011529 101 KRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWS 180 (483)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 180 (483)
++|..+..+++.....+.+...++..+|.+.++ |++..+.+++.+...++..+++++.|+++||+|||++++++.++.+
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~ 104 (452)
T PRK11273 26 LRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAA 104 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHH
Confidence 345555556666666777766777888988888 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhc--ccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHH-HHHhhHHHhhhcc
Q 011529 181 IATALTPVAAK--LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSV-TGLAFSPFLIHRF 257 (483)
Q Consensus 181 ~~~~~~~~~~~--~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~-~g~~~~~~l~~~~ 257 (483)
++.+++++.+. .+++.+++.|++.|++.+...+.....+.+++|+++|++++++.+.+..+|.. .+|+++..+....
T Consensus 105 i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~ 184 (452)
T PRK11273 105 AVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFN 184 (452)
T ss_pred HHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhc
Confidence 88887776531 16778899999999999988888888999999999999999999999999874 4565543443445
Q ss_pred CchHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccch-----hhhhcChhHHHHHHHHHH
Q 011529 258 GWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPW-----GLILSKPPVWALIVSHFC 332 (483)
Q Consensus 258 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 332 (483)
+||+.|++.+++.++..++.++..++++++....++++.+.........++.+..+. +.++|++.+|...+..++
T Consensus 185 gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 264 (452)
T PRK11273 185 DWHAALYMPAFAAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKHEQELTAKQIFMQYVLPNKLLWYIAIANVF 264 (452)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCChhhhhhccccccccccCCCccHHHHHHHHHHcChHHHHHHHHHHH
Confidence 999999998887777666665555655433211111110000000000000011111 236789999998888888
Q ss_pred HHHHHHHHHHhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhc
Q 011529 333 HNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSK 387 (483)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~ 387 (483)
.....+....++|.|+++..|++..+++....+..++.+++.++.|+++||++++
T Consensus 265 ~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~ 319 (452)
T PRK11273 265 VYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRG 319 (452)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 8888888899999999998899999999988888999999999999999999543
No 24
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.97 E-value=1.8e-29 Score=244.49 Aligned_cols=341 Identities=15% Similarity=0.153 Sum_probs=242.9
Q ss_pred HHHHHHHHHHhhhhhhhHHhhhh-hhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHH
Q 011529 107 VLCFSAFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATAL 185 (483)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 185 (483)
+..++.+++.......+.+.+|. +.+++|+|+.+.+++.+++.++..+++++.|+++||+|||+.+.++.++.+++.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~ 83 (366)
T TIGR00886 4 FFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLW 83 (366)
T ss_pred HHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHH
Confidence 34566667777778888999995 99999999999999999999999999999999999999999999999999999888
Q ss_pred hhhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhh----------
Q 011529 186 TPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH---------- 255 (483)
Q Consensus 186 ~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~---------- 255 (483)
+.+.+. +++.+++.|++.|++.+ ..+...+++.|++|+++|++++++.....++|..+++.+++.+..
T Consensus 84 ~~~~~~-~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~ 161 (366)
T TIGR00886 84 AGLAVQ-SYSVLLLLRLFIGIAGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPA 161 (366)
T ss_pred HHHHhh-hHHHHHHHHHHHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 877652 67888999999999865 456678899999999999999999998888888888887776654
Q ss_pred ccCchHHH-HHHHHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChhHHHHHHHHHHHH
Q 011529 256 RFGWPSVF-YSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHN 334 (483)
Q Consensus 256 ~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (483)
+.+||+.| +..+++..+..++.+...++.++++++.++.+.+ +.....++......++.+++|+++...+..++..
T Consensus 162 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (366)
T TIGR00886 162 HLAWGWAFVIVPAGILLLPALLIFFVGADTPPGKPATGKLSFK---GARWSVGTGALGDQLKVFRDRHTWILALLYSVTF 238 (366)
T ss_pred cccccchhHHHHHHHHHHHHHHHHHhcccCCcccccchhcccc---cccccccchhHHHHHHHHhccchhhHHHHHHHHH
Confidence 34899998 4445555444444444444433222111110000 0000000001114556788999988888877777
Q ss_pred HHHHHHHHhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhh
Q 011529 335 WGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLS 414 (483)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (483)
.....+..+.|.|+++.+|+++.+.+.+..+..+..++++++.|++.||+++|+.. ............+....
T Consensus 239 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~-------~~~~~~~~~~~~~~~~~ 311 (366)
T TIGR00886 239 GSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKL-------LMSFLGVAMGAFLVVLG 311 (366)
T ss_pred HHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhH-------HHHHHHHHHHHHHHHhc
Confidence 77888889999999998999999999999999999999999999999999988432 22222222222222222
Q ss_pred ccc--hhHHHHHHHHHhhhhhhhhhchhhhhHhhhccCcceeeeeee
Q 011529 415 HVD--SPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSVSIISIN 459 (483)
Q Consensus 415 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 459 (483)
... .....+....+.....+...........+..|+++|++.|+.
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~g~~ 358 (366)
T TIGR00886 312 LVSPLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFRRATGAVSGLV 358 (366)
T ss_pred CCCcchHHHHHHHHHHHHHHhccccchhhhcchhhchhhcccHHHHH
Confidence 221 333333333333333333444566666777788899988843
No 25
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.97 E-value=5.8e-30 Score=257.46 Aligned_cols=281 Identities=15% Similarity=0.223 Sum_probs=234.2
Q ss_pred HHHHHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHH
Q 011529 105 IVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATA 184 (483)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 184 (483)
.+..++++.++..++....++.+|.+.+++|.+..+.+++.+.+.++..++.++.|+++||+|||+++..+.++..++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 82 (485)
T TIGR00711 3 LTIVLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSL 82 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 45667778888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHH
Q 011529 185 LTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFY 264 (483)
Q Consensus 185 ~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~ 264 (483)
++.+++ +++.+++.|+++|++.+...+...+++.|++|+++|++++++......+|..+||.+++++.++.+||+.|+
T Consensus 83 ~~~~~~--~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~ 160 (485)
T TIGR00711 83 LCGVAP--NLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFL 160 (485)
T ss_pred HHhCcC--CHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhh
Confidence 999988 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCCCCC-ChhhHH-----------Hhhhcc---------------------------cC
Q 011529 265 SFGSLGTVWFTVWLSKAHSSPAEDPQL-RPAEKK-----------LIVSSC---------------------------AS 305 (483)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-----------~~~~~~---------------------------~~ 305 (483)
+.+.+.++..++..+..++++++.++. +..... ...+.. +.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (485)
T TIGR00711 161 INVPIGIIVVVVAFFILPRDKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWEL 240 (485)
T ss_pred hhhHHHHHHHHHHHHHcCCccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 988877776665555555433221111 100000 000000 00
Q ss_pred CCCCcccchhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHh
Q 011529 306 KEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLV 385 (483)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g 385 (483)
.++.+..+ .+++++|.++...+..++.....+....++|.|+++.+|+++.+.++......++.+++.++.|++.||++
T Consensus 241 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~ 319 (485)
T TIGR00711 241 TDDNPLVD-LRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKID 319 (485)
T ss_pred cCCCCccC-HHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 00111112 24678899988888888888888888899999999989999999999999999999999999999999999
Q ss_pred hcC
Q 011529 386 SKG 388 (483)
Q Consensus 386 ~~~ 388 (483)
+|+
T Consensus 320 ~~~ 322 (485)
T TIGR00711 320 PRK 322 (485)
T ss_pred cHH
Confidence 873
No 26
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.97 E-value=2.6e-29 Score=242.57 Aligned_cols=263 Identities=13% Similarity=0.103 Sum_probs=212.9
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhHHhhhhhhh-hcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHH
Q 011529 102 RWFIVVLCFSAFLLCNMDRVNMSIAILPMSA-EFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWS 180 (483)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 180 (483)
.++.+.+..++.++......++++..+.+.+ ++|+|..|.+++.++..+++.+++++.|++.||+|.|+++.++.++.+
T Consensus 32 a~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~ 111 (462)
T PRK15034 32 ARRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILI 111 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHH
Confidence 4567888888888889999999999888766 899999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhh-----hcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhh-
Q 011529 181 IATALTPVA-----AKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLI- 254 (483)
Q Consensus 181 ~~~~~~~~~-----~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~- 254 (483)
+.++..+++ + +++.+++.|++.|++ +..++.....+++++|+++||+++|+....+++|..+++++...+.
T Consensus 112 i~~~~~~~a~~~~~~--s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~ 188 (462)
T PRK15034 112 IPCVWLGIAVQNPNT--PFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIF 188 (462)
T ss_pred HHHHHHHHHHcccCC--CHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 999988876 5 899999999999998 6788999999999999999999999998777777776666554433
Q ss_pred ----h-------------ccCchHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhh
Q 011529 255 ----H-------------RFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLI 317 (483)
Q Consensus 255 ----~-------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (483)
+ ..+|+.+.++..++.++..++.++..++.++.+. + ..+.+.+
T Consensus 189 ~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~~~~--~------------------~~~~~~v 248 (462)
T PRK15034 189 VPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIASSRA--S------------------IADQLPV 248 (462)
T ss_pred HHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccc--C------------------HHHHHHH
Confidence 2 2337777777777777766666665444332110 0 1124468
Q ss_pred hcChhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 011529 318 LSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGL 389 (483)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~~ 389 (483)
+|+|..|.+.+.+++.+..+.++..++|.|+++.+ +.........+..+...+.++++|+++||+|+++.
T Consensus 249 lk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~--~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~v 318 (462)
T PRK15034 249 LQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQF--PDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRV 318 (462)
T ss_pred hCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc--ChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHH
Confidence 99999999999999999999999999999998854 33333333444567788899999999999998853
No 27
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.97 E-value=3.2e-29 Score=243.47 Aligned_cols=258 Identities=18% Similarity=0.220 Sum_probs=212.6
Q ss_pred HhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhcccHH
Q 011529 116 CNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLP 195 (483)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (483)
........++..|.+.+++|+|..++|++.+++.++..+++++.|+++||+|||+++..+.++.+++.+++.+++ +++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~--~~~ 92 (377)
T TIGR00890 15 TSGYVYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIAD--SLA 92 (377)
T ss_pred HhhHHhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHH--HHH
Confidence 333456678889999999999999999999999999999999999999999999999999999999999999998 999
Q ss_pred HHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHH
Q 011529 196 FLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFT 275 (483)
Q Consensus 196 ~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~ 275 (483)
.+++.|++.|++.+..++.....+.+++| ++|+++.++...+..+|..+++.+.+.+.+..+||+.|++.+++.++..+
T Consensus 93 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~ 171 (377)
T TIGR00890 93 ALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIV 171 (377)
T ss_pred HHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 99999999999999888888888999985 67999999999999999988777777777888999999999988887776
Q ss_pred HHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCC
Q 011529 276 VWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFN 355 (483)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 355 (483)
..+...++++++..+.+++ .+.+..+.++.++++.++...+..++..........+.+.|.++ +|.+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 238 (377)
T TIGR00890 172 LGAFLIGYPPGQLIKTNIE------------VSVKDYTVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPYGQS-LGLS 238 (377)
T ss_pred HHHHheecCchhccccCcc------------cchhhhhHHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHHHHHH-cCCC
Confidence 6665554433221111000 00011235577889998888777777666666666777777766 7888
Q ss_pred cchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 011529 356 LTESGLFCVLPWLTMAFSANLGGWIADTLVSKGL 389 (483)
Q Consensus 356 ~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~~ 389 (483)
..+.+.+.+...++.++++++.|++.||+++|+.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~ 272 (377)
T TIGR00890 239 DGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKT 272 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 8889999999999999999999999999998853
No 28
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.97 E-value=5.1e-30 Score=249.27 Aligned_cols=274 Identities=18% Similarity=0.240 Sum_probs=226.1
Q ss_pred HHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhc
Q 011529 112 AFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAK 191 (483)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~ 191 (483)
.++..+.+...++...|.+.+++|.+..+.+++.+++.++..++.++.|+++||+|||+++.++.++.+++.+++.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~- 81 (379)
T TIGR00881 3 GYAAYYLVRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFST- 81 (379)
T ss_pred hhhHHHHhHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhh-
Confidence 4566778888899999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHH-hhHHHhhhccCchHHHHHHHHHH
Q 011529 192 LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGL-AFSPFLIHRFGWPSVFYSFGSLG 270 (483)
Q Consensus 192 ~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~-~~~~~l~~~~g~~~~~~~~~~~~ 270 (483)
+++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|..++| .+++.+.+..+|++.|++.+++.
T Consensus 82 -~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (379)
T TIGR00881 82 -SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIA 160 (379)
T ss_pred -hHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999 57777777889999999888877
Q ss_pred HHHHHHHHHhccCCCCCCCCCChhh--HHHh---hhcccCCCCCcccchhhhhcChhHHHHHHHHHHHHHHHHHHHHhhH
Q 011529 271 TVWFTVWLSKAHSSPAEDPQLRPAE--KKLI---VSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMP 345 (483)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (483)
++..+..+...++++++.+..+.++ .++. .+..+++....+..++.++++|.+|.+.+..++.......+..+.|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (379)
T TIGR00881 161 IIVSLICFLLLRDSPQSCGLPPAEEMPNEEPDGDAEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTGILDWSP 240 (379)
T ss_pred HHHHHHHheeeCCCccccccCccccCcccccccccccccccccchHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7766666655555443221111000 0000 0000001111122356678899999988888888888888999999
Q ss_pred HHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhc
Q 011529 346 TYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSK 387 (483)
Q Consensus 346 ~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~ 387 (483)
.|+++.+|+++.+.+...+...++.+++.++.+++.||..++
T Consensus 241 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~ 282 (379)
T TIGR00881 241 LYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNG 282 (379)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCC
Confidence 999998899999999999999999999999999999987544
No 29
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.97 E-value=1.2e-28 Score=239.60 Aligned_cols=263 Identities=16% Similarity=0.235 Sum_probs=220.9
Q ss_pred HHHHHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHH
Q 011529 105 IVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATA 184 (483)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 184 (483)
.+..+....+..........+.+|.+.+++|.+..+.|++.+.+.++..+++++.|++.||+|||+++..+.++.+++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 83 (382)
T PRK10091 4 VILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNA 83 (382)
T ss_pred hHHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHH
Confidence 34555667777778888888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHH
Q 011529 185 LTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFY 264 (483)
Q Consensus 185 ~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~ 264 (483)
++.+++ +++.+++.|++.|++.+...+....++.+++++++|++++++...+..+|..++|.+++.+.+..+||+.|+
T Consensus 84 l~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~ 161 (382)
T PRK10091 84 MFTLSS--SYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFL 161 (382)
T ss_pred HHHHhC--cHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHH
Confidence 999998 999999999999999998888888999999999999999999999999999999999999999899999999
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChhHHHHHHHHHHHHHHHHHHHHhh
Q 011529 265 SFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWM 344 (483)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (483)
+.+++.++..+..+...|+.+++.+. +.+ ..+ +.+|++..|...+..++..........++
T Consensus 162 ~~~~~~~~~~~~~~~~lp~~~~~~~~---~~~---------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (382)
T PRK10091 162 LIAVFNIAVLASIYFWVPDIRDEAKG---GLR---------------EQF-HFLRSPAPWLIFAATMFGNAGVFAWFSYI 222 (382)
T ss_pred HHHHHHHHHHHHHHHhCCCCCccccc---CHH---------------HHH-HHhcChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99887777665555545543221110 000 012 34677777776665555555555566777
Q ss_pred HHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcC
Q 011529 345 PTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKG 388 (483)
Q Consensus 345 ~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~ 388 (483)
+.++++..|+++.+.+++.+..+++.++++++.+++.||+++++
T Consensus 223 ~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~ 266 (382)
T PRK10091 223 KPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLR 266 (382)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchh
Confidence 88888778999999999999999999999999999999999875
No 30
>PRK10133 L-fucose transporter; Provisional
Probab=99.97 E-value=1.7e-28 Score=241.50 Aligned_cols=336 Identities=13% Similarity=0.161 Sum_probs=242.9
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHH
Q 011529 102 RWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSI 181 (483)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 181 (483)
....+..+.+.+++..+......+.+|.+++++|+|+.+.|++.+.+.+++.+++++.|++.||+|||+++..+.++.++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~ 103 (438)
T PRK10133 24 YIIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYAL 103 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 44455666777788888888899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHh---hhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhh-c-
Q 011529 182 ATALT---PVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH-R- 256 (483)
Q Consensus 182 ~~~~~---~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-~- 256 (483)
+.+++ .+++ +++.++++|+++|+|.+...+..++++.++.++++|...+++.+....+|..++|.+++.+.. .
T Consensus 104 ~~~l~~~~~~a~--~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~ 181 (438)
T PRK10133 104 GAALFWPAAEIM--NYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNV 181 (438)
T ss_pred HHHHHHHHHhcC--CHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 98775 3456 899999999999999999999999999998777777778999999999999999998876541 0
Q ss_pred ------------------------cCchHHHHHHHHHHHHHHHHH-HHhccCCCCCCCCCChhhHHHhhhcccCCCCCcc
Q 011529 257 ------------------------FGWPSVFYSFGSLGTVWFTVW-LSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKT 311 (483)
Q Consensus 257 ------------------------~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (483)
.+||++|+....+..+..++. ....|+.+.+ ++ ++ ++ .....
T Consensus 182 ~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~-~~-~~-~~----------~~~~~ 248 (438)
T PRK10133 182 PHQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSD-NH-SD-AK----------QGSFS 248 (438)
T ss_pred cccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc-cc-cc-cc----------ccchh
Confidence 245666654443333222222 2222221111 00 00 00 00001
Q ss_pred cchhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHHH-HHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcCCc
Q 011529 312 IPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYY-NQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLS 390 (483)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~~~ 390 (483)
.+.++++++|.++...+..++....+.....|.+.|+ ++.+|+++.++++......++.++|+++++++.||+++|+..
T Consensus 249 ~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l 328 (438)
T PRK10133 249 ASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVL 328 (438)
T ss_pred hhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHH
Confidence 2355788999988877777888888888888999886 556899999999999999999999999999999999988432
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHhhhhhhhhhchhhhhHhhhccCcceeeeeeeecC
Q 011529 391 VTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSVSIISINILR 462 (483)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 462 (483)
. ....+......+... .+.... +..+.+.+.+.+...|...+...+..+++.+.+.++....
T Consensus 329 ~-------~~~~~~~~~~~~~~~--~~~~~~-~~~~~l~glg~~~i~P~~~s~a~~~~~~~~~~as~l~~~~ 390 (438)
T PRK10133 329 A-------AYALIAMALCLISAF--AGGHVG-LIALTLCSAFMSIQYPTIFSLGIKNLGQDTKYGSSFIVMT 390 (438)
T ss_pred H-------HHHHHHHHHHHHHHH--cCChHH-HHHHHHHHHHHHHHHHHHHHHHHcccchhhccchhHHhHH
Confidence 1 111111111111111 112222 2333444445556677788888887777777777755443
No 31
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.97 E-value=8.3e-29 Score=241.32 Aligned_cols=264 Identities=16% Similarity=0.210 Sum_probs=216.0
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHH
Q 011529 101 KRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWS 180 (483)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 180 (483)
..|.....++.+.+.... ....++.+|.+.+++|+|..+.|++.+.+.+++.+++++.|+++||+|||+++..+.++.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~-~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~ 85 (393)
T PRK09705 7 LNFMLLVLVLIGLNMRPL-LTSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIA 85 (393)
T ss_pred hHHHHHHHHHHHHHcchh-hhccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHH
Confidence 344444444444443322 3667889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhcc-Cc
Q 011529 181 IATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF-GW 259 (483)
Q Consensus 181 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-g~ 259 (483)
++.+++++++ +++.+++.|+++|++.+...+....++.+++| ++|+++++++..+..+|..+|+.+++++.++. +|
T Consensus 86 ~~~~~~~~a~--~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w 162 (393)
T PRK09705 86 VGALMRELYP--QSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETW 162 (393)
T ss_pred HHHHHHHHCc--chHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCH
Confidence 9999999999 99999999999999999999999999999996 88999999999999999999999999988875 89
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChhHHHHHHHHHHHHHHHHH
Q 011529 260 PSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFI 339 (483)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (483)
|+.+.+.++..++..+..+...++.++++++ + ....++.+++++.|...+..++....+..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~---------------~~~~~~~l~~~~~~~l~~~~~~~~~~~~~ 223 (393)
T PRK09705 163 YQTLAWWALPAVVALFAWWWQSAREVASSHK----T---------------TTTPVRVVFTPRAWTLGVYFGLINGGYAS 223 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCccccC----C---------------CcCCcccccCHhHHHHHHHHHHHHHHHHH
Confidence 9988776665544433333322222211100 0 00112356788888887777777788888
Q ss_pred HHHhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcC
Q 011529 340 LLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKG 388 (483)
Q Consensus 340 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~ 388 (483)
...|+|.|+++ +|.+..+++...++.+++.++++++.+++.||+++|+
T Consensus 224 ~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~ 271 (393)
T PRK09705 224 LIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRK 271 (393)
T ss_pred HHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchH
Confidence 99999999988 7999999999999999999999999999999999874
No 32
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.97 E-value=1.3e-28 Score=243.36 Aligned_cols=280 Identities=15% Similarity=0.191 Sum_probs=218.3
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHH
Q 011529 101 KRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWS 180 (483)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 180 (483)
.++..+..+.+.++..+++.....+.+|.+.+++|+++.+.+++.+++.++..+++++.|+++||+|||+++.++.++.+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~ 94 (426)
T PRK12307 15 PQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYS 94 (426)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHH
Confidence 44556777888888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCch
Q 011529 181 IATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWP 260 (483)
Q Consensus 181 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~ 260 (483)
++.++..+++ +++.++++|++.|++.+...+....++.|++|+++|++++++...+..+|.++++.+.+.+.+..+||
T Consensus 95 ~~~~~~~~~~--~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~ 172 (426)
T PRK12307 95 VGTGLSGLAS--GVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWR 172 (426)
T ss_pred HHHHHHHHHh--HHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHH
Confidence 9999999998 89999999999999999999999999999999999999999999999999999999999999989999
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChhHHHHHHHHH---HHHHHH
Q 011529 261 SVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHF---CHNWGT 337 (483)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 337 (483)
+.|++..+..++. +......+++++..+ ++.+...+..+...+....+++++++++.++...+... ......
T Consensus 173 ~~f~i~~~~~~~~-~~~~~~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (426)
T PRK12307 173 AAFFVGLLPVLLV-IYIRARAPESKEWEE----AKLSGKGKHSQSAWSVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGAN 247 (426)
T ss_pred HHHHHHHHHHHHH-HHHHHHCCCChHHHH----hhhhccccccccchhhhhHHHHHHHhhchHHHHHHHHHHHHHHHHHH
Confidence 9998754333222 111111121111000 00000000000000111224667888888765443322 222333
Q ss_pred HHHHHhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcC
Q 011529 338 FILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKG 388 (483)
Q Consensus 338 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~ 388 (483)
..+..++|.|+++ .|+++.+.+.+.+...++.++++++.|++.||+++|+
T Consensus 248 ~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~ 297 (426)
T PRK12307 248 WPIFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKK 297 (426)
T ss_pred HHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH
Confidence 4467789999988 6999999999999999999999999999999999874
No 33
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.97 E-value=7.8e-29 Score=245.21 Aligned_cols=286 Identities=15% Similarity=0.231 Sum_probs=221.2
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHH
Q 011529 102 RWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSI 181 (483)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 181 (483)
++..+..+.+.+...+.+...+....|.+.+ +|.++.+.+++.+++.++..+++++.|+++||+|||+++..+.++.++
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~ 103 (438)
T TIGR00712 25 RWQVFLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAA 103 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHH
Confidence 4566666667777777777777777887776 599999999999999999999999999999999999999999999888
Q ss_pred HHHHhhhhhc--ccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhh-ccC
Q 011529 182 ATALTPVAAK--LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH-RFG 258 (483)
Q Consensus 182 ~~~~~~~~~~--~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-~~g 258 (483)
+.++..+.+. .+++.+.+.|++.|++.+..++.....+.|++|+++|++++++.+....+|..+++.+.+...+ ..+
T Consensus 104 ~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~ 183 (438)
T TIGR00712 104 VMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFND 183 (438)
T ss_pred HHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhh
Confidence 8877665421 1577788899999999999889899999999999999999999999999999999888776544 578
Q ss_pred chHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCChh-hHHH-hhhcccC-CCC--CcccchhhhhcChhHHHHHHHHHHH
Q 011529 259 WPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPA-EKKL-IVSSCAS-KEP--VKTIPWGLILSKPPVWALIVSHFCH 333 (483)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (483)
||+.|++.+++.++..+..++..++++++....+.+ .++. ..+..+. +++ .+....+.++|++.+|...+..++.
T Consensus 184 w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (438)
T TIGR00712 184 WHAALYFPAICAIIVALFAFAMMRDTPQSCGLPPIEEYRNDYPDDYNEKAEQELTAKEIFMQYVLPNKLLWYIAIANVFV 263 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCCCchhcccccccccccccccccchHHHHHHHHccCchHHHHHHHHHHH
Confidence 999999988888776666555555544321110000 0000 0000000 000 0001122467899999888888887
Q ss_pred HHHHHHHHHhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcC
Q 011529 334 NWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKG 388 (483)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~ 388 (483)
....++..+++|.|+++..|+++.++++...+..++.+++.++.|++.||+++++
T Consensus 264 ~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~ 318 (438)
T TIGR00712 264 YLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGN 318 (438)
T ss_pred HHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCc
Confidence 8888888899999999988999999999999999999999999999999997553
No 34
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.97 E-value=4.6e-28 Score=236.78 Aligned_cols=332 Identities=14% Similarity=0.128 Sum_probs=248.4
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHH
Q 011529 102 RWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSI 181 (483)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 181 (483)
.++.+.+..+..++..+....+.+.+|.+.+++|.|+.+.+++.+++.++..++++++|+++||+|||+++..+.++..+
T Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~ 85 (394)
T PRK11652 6 NVNLLFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFIL 85 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHH
Confidence 44455555556666667777888889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchH
Q 011529 182 ATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPS 261 (483)
Q Consensus 182 ~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~ 261 (483)
+.++..+.+ +++.+++.|++.|++.+...+....+..|.++++++++++++.+.+..++..++|.+++.+.+..|||+
T Consensus 86 ~~~~~~~~~--~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~ 163 (394)
T PRK11652 86 GTLVALFAH--SLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRA 163 (394)
T ss_pred HHHHHHHHc--cHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHH
Confidence 988888887 899999999999999888888888899999999999999999999999999999999999999899999
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChhHHHHHHHHHHHHHHHHHHH
Q 011529 262 VFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILL 341 (483)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (483)
.|++.++..++..+......+++++++++. + + ...+++..+++|.++...+..+........+.
T Consensus 164 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (394)
T PRK11652 164 CYLFLLLLGAGVTFSMARWMPETRPADARR-T-R--------------VLASYRTLLSNRRFNCYLLMLIGTLAGIAVFE 227 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhCCccCccccch-h-H--------------HHHHHHHHHcChHHHHHHHHHHHHHHHHHHHH
Confidence 999988777665555444445433221111 0 0 02245677889988877666666666666667
Q ss_pred HhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHh--hccchh
Q 011529 342 TWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQL--SHVDSP 419 (483)
Q Consensus 342 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 419 (483)
.+.+.++++.+|.+..+.+++.....++.+++..+.+++.||.+++ ..............+... ......
T Consensus 228 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (394)
T PRK11652 228 ACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTL--------MWQSVICCLLAGLLMWIPGWFGVMNV 299 (394)
T ss_pred HhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHhccccH
Confidence 7888899988899999999988888888889999999999998733 111111111111111111 112223
Q ss_pred HHHHHHHHHhhhhhhhhhchhhhhHhhhccCcceeeeeee
Q 011529 420 AMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSVSIISIN 459 (483)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 459 (483)
+.......+.+...+...+.......+..|+++|.+.+..
T Consensus 300 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~ 339 (394)
T PRK11652 300 WTLLVPAALFFFGAGMLFPLATSGAMEPFPYLAGTAGALL 339 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHH
Confidence 3333333333333445566677777777788888877643
No 35
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.97 E-value=1.5e-28 Score=237.71 Aligned_cols=333 Identities=13% Similarity=0.043 Sum_probs=246.1
Q ss_pred HHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhh
Q 011529 109 CFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPV 188 (483)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 188 (483)
+....++..+......+.+|.+..+++.++.+++++.+++.++..+++++.|+++||+|||+++..+.++..++.++..+
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 83 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPF 83 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHH
Confidence 34566677777788888899999999999999999999999999999999999999999999999998888877776655
Q ss_pred hhc---ccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHH
Q 011529 189 AAK---LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYS 265 (483)
Q Consensus 189 ~~~---~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~ 265 (483)
... .+++.+++.|++.|++.+...+...+++.|++|+++|++++++.+....+|.++||.+++.+.+..||++.|++
T Consensus 84 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~ 163 (365)
T TIGR00900 84 VALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWV 163 (365)
T ss_pred HHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 431 26889999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChhHHHHHHHHHHHHHHHHHHH-Hhh
Q 011529 266 FGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILL-TWM 344 (483)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 344 (483)
.++..++..+..+...+++++++++.+.+++. . ++....++.++|+|.++...+..++......... .+.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (365)
T TIGR00900 164 DAVGFAISALLIVSVRIPELAASEIQALSNAV-L--------RDTREGIKFVLKNPLLRTLLLLALLFNLVFAPAIVALF 234 (365)
T ss_pred HHHHHHHHHHHHHhcccccCCCccccccchhH-H--------HHHHhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 87766665544444332222111111100000 0 0012245677889999888888777777777666 888
Q ss_pred HHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhccc-hhHHHH
Q 011529 345 PTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVD-SPAMAV 423 (483)
Q Consensus 345 ~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 423 (483)
|.+.++.+|.+..+.+.+.....++.+++.++.+++.||+++++. .. .+..............+ +.+...
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-------~~--~~~~~~~~~~~~~~~~~~~~~~~~ 305 (365)
T TIGR00900 235 PYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMAL-------MT--GAIFVIGLAILVVGLTPPNFPLFL 305 (365)
T ss_pred HHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHH-------HH--HHHHHHHHHHHHHHhhchhHHHHH
Confidence 999988789999999999999999999999999999999987732 11 11212222222211222 233333
Q ss_pred HHHHHhhhhhhhhhchhhhhHhhhc-cCcceeeeeee
Q 011529 424 LCMACSQGTDAFSQSGLYSNHQDIA-PRYSVSIISIN 459 (483)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~ 459 (483)
+...+.+...+...+.......+.. ++++|++.|..
T Consensus 306 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 342 (365)
T TIGR00900 306 VLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQ 342 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 3333333334444555666666655 45688888744
No 36
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.97 E-value=4.6e-28 Score=237.30 Aligned_cols=265 Identities=12% Similarity=0.080 Sum_probs=220.1
Q ss_pred HHHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHh
Q 011529 107 VLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALT 186 (483)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 186 (483)
..+.+..++.......+.+.+|.+.+++|.+..+.++..+++.++..++++++|+++||+|||+++..+.++.+++.+++
T Consensus 19 ~~~~~~~~~~~~~~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~ 98 (413)
T PRK15403 19 MALILYDFAAYLTTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAAT 98 (413)
T ss_pred HHHHHHHHHHHHHHHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHH
Confidence 33444556667777888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHHH
Q 011529 187 PVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSF 266 (483)
Q Consensus 187 ~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~ 266 (483)
.+++ +++.++++|+++|++.+...+....++.|++|++++++++++......+|..+||.+++.+.++.|||+.|++.
T Consensus 99 ~~a~--~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~ 176 (413)
T PRK15403 99 LFTT--SMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAII 176 (413)
T ss_pred HHcC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 9988 99999999999999988767777888999999999999999999999999999999999999989999999999
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHH
Q 011529 267 GSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPT 346 (483)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (483)
+++.++..+..++..|++++++++... .+. ...+++.++|||.+|...+..++.......+..+.|.
T Consensus 177 ~~~~~i~~~~~~~~lp~~~~~~~~~~~-~~~------------~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~P~ 243 (413)
T PRK15403 177 AVMGLIAFVGLLLAMPETVKRGAVPFS-AKS------------VLRDFRNVFRNRLFLTGAATLSLSYIPMMSWVAVSPV 243 (413)
T ss_pred HHHHHHHHHHHHHhCCCCccccCCCCC-hHH------------HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhChH
Confidence 888777666555545554322111100 000 0124667899999999888888888888888888999
Q ss_pred HHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhh
Q 011529 347 YYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVS 386 (483)
Q Consensus 347 ~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~ 386 (483)
++++.+|+++.+.++.......+..++..+.+++.+|..+
T Consensus 244 ~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~ 283 (413)
T PRK15403 244 ILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTE 283 (413)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCc
Confidence 9999889999999998887888888887777776654433
No 37
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.97 E-value=1.2e-28 Score=239.72 Aligned_cols=256 Identities=16% Similarity=0.218 Sum_probs=218.0
Q ss_pred hhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhcccHHHHH
Q 011529 119 DRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLL 198 (483)
Q Consensus 119 ~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 198 (483)
...++.+.+|.+.+++|+++.+.+++.+++.++..++.+++|+++||+|||+++..+.++.+++.+++.+.+ +++.++
T Consensus 6 ~~~~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~ 83 (377)
T PRK11102 6 AIDMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQ--TIDQLI 83 (377)
T ss_pred HHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHc--cHHHHH
Confidence 345667889999999999999999999999999999999999999999999999999999999999998888 899999
Q ss_pred HHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHHHHH
Q 011529 199 VVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWL 278 (483)
Q Consensus 199 ~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 278 (483)
+.|++.|++.+...+...+++.|++|+++|++++++.+....+|..++|.+++.+.+..+|++.|++.+++.++..++..
T Consensus 84 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (377)
T PRK11102 84 YMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVF 163 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999988888777666655
Q ss_pred HhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcch
Q 011529 279 SKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTE 358 (483)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 358 (483)
...+++++++++.+.+.++ ...++++.+++|.++...+..++.......+..+.|.++.+.+|+++.+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~ 231 (377)
T PRK11102 164 FFIPETLPKERRQPFHLRT------------TIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQN 231 (377)
T ss_pred HhCCccCcccccCCCChHH------------HHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHH
Confidence 5555543221111110000 0123556788898888777777777777777888888888888999999
Q ss_pred hhHHhHHHHHHHHHHHHHHHHHHHHHhhcC
Q 011529 359 SGLFCVLPWLTMAFSANLGGWIADTLVSKG 388 (483)
Q Consensus 359 ~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~ 388 (483)
.+.+.....++.+++.++.+++.||+++|+
T Consensus 232 ~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~ 261 (377)
T PRK11102 232 FGYYFALNIVFLFVMTIINSRFVRRVGALN 261 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCHHH
Confidence 999999999999999999999999999885
No 38
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.97 E-value=6.6e-28 Score=241.70 Aligned_cols=279 Identities=17% Similarity=0.188 Sum_probs=206.6
Q ss_pred HHHHHHHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhh----HHH--HHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHH
Q 011529 103 WFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPAT----VGL--IQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGV 176 (483)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~----~g~--~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~ 176 (483)
++.+....++.++.++|...++...|.+.++++.+..+ ++. +.++..++..++++++|+++||+|||+++.++.
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~ 94 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITI 94 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 34566778899999999999999999999998643321 222 257788999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhcccHHH--------HHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHh
Q 011529 177 VWWSIATALTPVAAKLGLPF--------LLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLA 248 (483)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~--------l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 248 (483)
++++++.+++++++ +++. ++++|+++|++.|..++...+++.|++|+++|++..++...+..+|..+|+.
T Consensus 95 ~l~~i~~~~~a~~~--~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~ 172 (490)
T PRK10642 95 VIMSISTFCIGLIP--SYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAG 172 (490)
T ss_pred HHHHHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998 7653 7899999999999999999999999999999999999999888888888886
Q ss_pred hHHHhh--------hccCchHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcC
Q 011529 249 FSPFLI--------HRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSK 320 (483)
Q Consensus 249 ~~~~l~--------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (483)
+...+. ..+|||+.|++.+++.++. ++.....+|+|+..+..++.++ ...+...+.+..++++++++
T Consensus 173 ~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~-~~~~~~~~esp~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 247 (490)
T PRK10642 173 VVVLISTIVGEANFLDWGWRIPFFIALPLGIIG-LYLRHALEETPAFQQHVDKLEQ----GDREGLQDGPKVSFKEIATK 247 (490)
T ss_pred HHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHH-HHHHHcCCCChhHHHHHHhhhh----hccccccccccCCHHHHHHH
Confidence 665443 2579999999876555443 2333334443321100000000 00000011123356666653
Q ss_pred -hhHHH-HHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcC
Q 011529 321 -PPVWA-LIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKG 388 (483)
Q Consensus 321 -~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~ 388 (483)
++.+. .....++....++.+..|+|.|+++.+|++..+.++......++.+++.++.|+++||+|||+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~ 317 (490)
T PRK10642 248 HWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRP 317 (490)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH
Confidence 23222 223334455677788899999998878999888888877888899999999999999999884
No 39
>PRK11043 putative transporter; Provisional
Probab=99.97 E-value=1.1e-27 Score=234.63 Aligned_cols=328 Identities=15% Similarity=0.138 Sum_probs=242.1
Q ss_pred HHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhh
Q 011529 109 CFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPV 188 (483)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 188 (483)
+.+...+..+....+.+.+|.+.+++|.++.+.+++.+++.++..++++++|+++||+|||+++..+.++..++.+++.+
T Consensus 11 ~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 90 (401)
T PRK11043 11 LAGLSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLW 90 (401)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHH
Confidence 33334455566777888889999999999999999999999999999999999999999999999999999999888888
Q ss_pred hhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHHHHH
Q 011529 189 AAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGS 268 (483)
Q Consensus 189 ~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~ 268 (483)
.+ +++.+++.|++.|++.+...+...+++.|+++++++++..+.......+|..++|.+++.+.++.|||+.|++.++
T Consensus 91 ~~--~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~ 168 (401)
T PRK11043 91 VE--SAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFA 168 (401)
T ss_pred hc--CHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHH
Confidence 88 8999999999999998888888889999999999999999999999999999999999999999999999998888
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHHH
Q 011529 269 LGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYY 348 (483)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (483)
+.++..+..+...++++++ + ++++ ..++++++|+|.++...+...+.......+..+.|.++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~-~--~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 230 (401)
T PRK11043 169 ITLLLILPTLRLKPSKKAR-K--QSQD---------------ALTFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFIL 230 (401)
T ss_pred HHHHHHHHHHHcCCCCCcc-c--cchH---------------HHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 7777665555443332211 1 0000 12456778888888766666666666677778889988
Q ss_pred HHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHH
Q 011529 349 NQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMAC 428 (483)
Q Consensus 349 ~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (483)
++ .|+++.+.++......++.+++.++.+++.||+++|+..... .....+.............+..+..+....+
T Consensus 231 ~~-~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (401)
T PRK11043 231 EQ-MGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWL----LVLFAVSVIAIWLASLLSHPSLVPLLIPFCV 305 (401)
T ss_pred HH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHH----HHHHHHHHHHHHHHHHhccCcHHHHHHHHHH
Confidence 76 799999999988888889999999999999999877422111 1111111111111111122233333333333
Q ss_pred hhhhhhhhhchhhhhHhhhccCcceeeeeeeec
Q 011529 429 SQGTDAFSQSGLYSNHQDIAPRYSVSIISINIL 461 (483)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 461 (483)
.....+...+.......+..|+++|++.|+...
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 338 (401)
T PRK11043 306 MAAANGAIYPIVVAQALRPFPQATGKAAALQNT 338 (401)
T ss_pred HHHHHHHHHHHHHHHHhhhCcccChHHHHHHHH
Confidence 333334445555555555567788888885443
No 40
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.97 E-value=1.8e-28 Score=243.08 Aligned_cols=351 Identities=12% Similarity=0.096 Sum_probs=245.4
Q ss_pred CChhHHHHHHHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHH
Q 011529 99 FPKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVW 178 (483)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 178 (483)
..++|.++..+++.....+.....++..+|.+.+++|.+..+.+++.+.+.++..++.++.|+++||+|||++++.+.++
T Consensus 14 ~~~~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~ 93 (455)
T TIGR00892 14 GGWGWVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLL 93 (455)
T ss_pred CCcchHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHH
Confidence 34567777777777666666666678889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhcccHHHHHH-HHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhcc
Q 011529 179 WSIATALTPVAAKLGLPFLLV-VRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF 257 (483)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~l~~-~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 257 (483)
.+++.+++++++ +++.+++ .|++.|++.+...+...+++.++++ ++|+++.++.+.+..+|..++|.+++.+.+.+
T Consensus 94 ~~~~~~~~~~~~--~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~ 170 (455)
T TIGR00892 94 ASLGMILASFSS--NVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESF 170 (455)
T ss_pred HHHHHHHHHHhh--hHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHh
Confidence 999999888888 8887765 4689999988776777888899995 88999999999999999999999999999999
Q ss_pred CchHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCh-hhH---HHhhhc--c-c-CCCCCcccchhhhhcChhHHHHHHH
Q 011529 258 GWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRP-AEK---KLIVSS--C-A-SKEPVKTIPWGLILSKPPVWALIVS 329 (483)
Q Consensus 258 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~--~-~-~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (483)
|||+.|++.+++.++..+..++..++++.++....+ ++. ....+. . . .++..+..++ +++++|.++...+.
T Consensus 171 gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 249 (455)
T TIGR00892 171 GWRGSFLILGGLLLHCCVCGALMRPVGPSQRVSKSKSKEGLPPDGSTKKLSKKSTAEKINRFLDF-SLFTHRGFLVYLSG 249 (455)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHhCCCCcccccccccccccCCCCCccccccccchhhhhhhhcch-HHhcCchHHHHHHH
Confidence 999999999988776655544444332211000000 000 000000 0 0 0000001112 46789999988888
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHH
Q 011529 330 HFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFF 409 (483)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~ 409 (483)
.++..........++|.|+++ .|++..+++++.++.+++.++++++.+++.||...++. +......+....++.
T Consensus 250 ~~l~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~-----~~~~~~~~~~~~~l~ 323 (455)
T TIGR00892 250 NVIMFLGFFAPIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPH-----VQYLFSFALLFNGLT 323 (455)
T ss_pred HHHHHHHccchHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHH-----HHHHHHHHHHHHHHH
Confidence 888888888888899999987 79999999999999999999999999999997421110 112222222222222
Q ss_pred HHHhhccchhHHHHHHHHHhhhhhhhhhchhhhhHhhh-ccCcceeeeeee
Q 011529 410 LTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDI-APRYSVSIISIN 459 (483)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~ 459 (483)
.......++.+.+++...+.+...+...+.......+. +++++|+++|+.
T Consensus 324 ~ll~~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~ 374 (455)
T TIGR00892 324 HLLCALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLV 374 (455)
T ss_pred HHHHHHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHH
Confidence 22222233333333333333333334444455555554 455678888744
No 41
>PRK10504 putative transporter; Provisional
Probab=99.97 E-value=2.2e-27 Score=237.55 Aligned_cols=281 Identities=16% Similarity=0.193 Sum_probs=229.5
Q ss_pred HHHHHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHH
Q 011529 105 IVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATA 184 (483)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 184 (483)
.++.++++.++..++...+.+.+|.+.+++|.++.+.+++.+.+.++..++.+++|+++||+|||++++.+.++.+++.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~ 90 (471)
T PRK10504 11 QLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSL 90 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHH
Confidence 45566777888888888899999999999999999999999999999999999999999999999999999999988888
Q ss_pred HhhhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHH
Q 011529 185 LTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFY 264 (483)
Q Consensus 185 ~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~ 264 (483)
++.+.+ +++.+++.|+++|++.+...+...+++.|++|+++|++++++.+...++|..+||.+++.+.++.|||+.|+
T Consensus 91 ~~~~~~--~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~ 168 (471)
T PRK10504 91 FCALSG--TLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFL 168 (471)
T ss_pred HHHHhC--CHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHH
Confidence 888887 899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCCCCCChhhHHH-----------hhh--------------------------cccCCC
Q 011529 265 SFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKL-----------IVS--------------------------SCASKE 307 (483)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~--------------------------~~~~~~ 307 (483)
+......+..+......++.+.+..+.+...... ..+ ..+...
T Consensus 169 ~~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (471)
T PRK10504 169 INIPVGIIGAIATLMLMPNYTMQTRRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARNN 248 (471)
T ss_pred HHHHHHHHHHHHHHHhCCCccccCCCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9887776666655555444332222111110000 000 000111
Q ss_pred CCcccchhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhc
Q 011529 308 PVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSK 387 (483)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~ 387 (483)
+++..+. +++|||.++...+..++..........+.|.|++...|.++.+.++......++.+++.++.+++.||+++|
T Consensus 249 ~~~~~~~-~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~ 327 (471)
T PRK10504 249 NRALFSL-KLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYR 327 (471)
T ss_pred CCCccCH-HHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch
Confidence 1122233 478999998888888888888777778899999987899999999999888888999999999999999988
Q ss_pred C
Q 011529 388 G 388 (483)
Q Consensus 388 ~ 388 (483)
+
T Consensus 328 ~ 328 (471)
T PRK10504 328 R 328 (471)
T ss_pred H
Confidence 4
No 42
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.97 E-value=8.7e-28 Score=235.10 Aligned_cols=268 Identities=13% Similarity=0.120 Sum_probs=206.4
Q ss_pred HHHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHh
Q 011529 107 VLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALT 186 (483)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 186 (483)
....++.++...........++.+.+++|.++.+.|++.+.+.++..+++++.|++.||+|||+++..+.++.+++.+++
T Consensus 16 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~ 95 (402)
T TIGR00897 16 LWGYIGVVVFMTGDGLEQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAF 95 (402)
T ss_pred hHHHHHHHHHHHhhhhHHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHH
Confidence 33444444444454445556677778999999999999999999999999999999999999999999999988887654
Q ss_pred h---h-hhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHH-HHHHhhHHHhhhccCchH
Q 011529 187 P---V-AAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGS-VTGLAFSPFLIHRFGWPS 261 (483)
Q Consensus 187 ~---~-~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~-~~g~~~~~~l~~~~g~~~ 261 (483)
. + .+ +++.+++.|++.|++.+...+...+.+.+++|+++|++++|+.+...++|. .++|.+++.+.+.+||+.
T Consensus 96 ~~~~~~~~--~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~ 173 (402)
T TIGR00897 96 IVFGLGHA--NYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMN 173 (402)
T ss_pred HHHhccCc--cHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHH
Confidence 2 2 23 688888999999999888878888889999999999999999999999997 689999999998889776
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChhHHHHHHHHHHHHHHHHHHH
Q 011529 262 VFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILL 341 (483)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (483)
.++.......+..++.++..++.++++++.++.+. .+....++.++|+|.++...+..++.....+.+.
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (402)
T TIGR00897 174 TLWSALAFVLTGGVIALFSNKDIFTPQHMQTREKF-----------SELGKAATILFTNPNVLLGGMVRIINTIGLFGFA 242 (402)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCCcccccCCcch-----------hhHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHH
Confidence 65554443333333333333332211111000000 0001235678899999988888888888888889
Q ss_pred HhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcC
Q 011529 342 TWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKG 388 (483)
Q Consensus 342 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~ 388 (483)
++.|.|+++ +|++..+.+.+.....++..++.++.|++.||+++|+
T Consensus 243 ~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~ 288 (402)
T TIGR00897 243 VFLPMFVAE-LGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMN 288 (402)
T ss_pred HHHHHHHHH-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchh
Confidence 999999877 8999999999888999999999999999999999875
No 43
>TIGR00895 2A0115 benzoate transport.
Probab=99.97 E-value=1.5e-28 Score=240.68 Aligned_cols=348 Identities=23% Similarity=0.326 Sum_probs=245.6
Q ss_pred ChhHHHHHHHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHH
Q 011529 100 PKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWW 179 (483)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 179 (483)
++++..+..+.+..+..+++.....+..|.+.+++|.+..+.+++.++..++..++.++.|+++||+|||+++..+.++.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~ 92 (398)
T TIGR00895 13 RYQWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLF 92 (398)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHH
Confidence 34566666777777778888888888899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCc
Q 011529 180 SIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGW 259 (483)
Q Consensus 180 ~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~ 259 (483)
+++.++..+.+ +++.+++.+++.|++.+...+...+++.|++|+++|++++++.+....+|..+++.+++.+.+..+|
T Consensus 93 ~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~ 170 (398)
T TIGR00895 93 SVFTLLCALAT--NVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGW 170 (398)
T ss_pred HHHHHHHHHcc--chHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccc
Confidence 99988888888 8999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCChhhHHH----hhhc-------ccCCC----CCcccchhhhhcC---h
Q 011529 260 PSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKL----IVSS-------CASKE----PVKTIPWGLILSK---P 321 (483)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-------~~~~~----~~~~~~~~~~~~~---~ 321 (483)
++.+++.+++.++..++.....+++++...+.++++... .... ...++ +..+..++.++++ +
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (398)
T TIGR00895 171 RSLFYVGGIAPLLLLLLLMRFLPESIDFLVSKRPETVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQGKTAR 250 (398)
T ss_pred eeehhhhhhHHHHHHHHHHHhCCCCChHHHhcCHHHHHHHHHHHHHhccccccccccccccccchhhHHHHHHhcchhHH
Confidence 999998876666655555555555432111111111000 0000 00000 0011112223322 3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHH
Q 011529 322 PVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSI 401 (483)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~~~~~~~~~~~~~~ 401 (483)
..+...+..++..........+.|.+.++ .|.++.+.+...+...++.+++.++.+++.||+++|+. .....
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-------~~~~~ 322 (398)
T TIGR00895 251 ITVLLWLLYFMLLVGVYFLTNWLPKLMVE-LGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVT-------ALLLL 322 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHH-------HHHHH
Confidence 33444455556666677777888855544 89999999999999999999999999999999987621 11111
Q ss_pred HHHHHHHHHHHhhccchhHHHHHHHHHhhhhhhhhhchhhhhHhhhcc-Ccceeeeeee
Q 011529 402 GFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAP-RYSVSIISIN 459 (483)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~ 459 (483)
........+.. ...+.........+.+...+...+.......+..| +++|+++|+.
T Consensus 323 ~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 379 (398)
T TIGR00895 323 LGAVFAVLVGS--TLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWA 379 (398)
T ss_pred HHHHHHHHHHH--HhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHH
Confidence 11111111111 12222222333333333334445556667777654 5688888743
No 44
>PRK15075 citrate-proton symporter; Provisional
Probab=99.97 E-value=2.3e-27 Score=234.46 Aligned_cols=270 Identities=14% Similarity=0.137 Sum_probs=202.8
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHH-HHHH-----HHHHHHHHhhHHHHHhhcCCchHHHHH
Q 011529 102 RWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLI-QSSF-----FWGYLLTQIAGGIWADTVGGKAVLGFG 175 (483)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~-~~~~-----~~~~~~~~~~~g~l~dr~g~r~~~~~~ 175 (483)
|++....++++.++.++|...+++..|.+.++++.++.+.+.+ .+.. .+...+++++.|+++||+|||++++.+
T Consensus 13 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~ 92 (434)
T PRK15075 13 KARAILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVT 92 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHH
Confidence 4446788888999999999999999999999999988776543 2222 233346789999999999999999999
Q ss_pred HHHHHHHHHHhhhhhcccHH--------HHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHH
Q 011529 176 VVWWSIATALTPVAAKLGLP--------FLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGL 247 (483)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~--------~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 247 (483)
.++.+++.+++++++ +++ .++++|+++|++.+...+....++.|++|+++|++++++.+....+|..+++
T Consensus 93 ~~~~~~~~~l~~~~~--~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~ 170 (434)
T PRK15075 93 LSIMASGTLLIAFVP--GYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAA 170 (434)
T ss_pred HHHHHHHHHHHHhCC--cHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHH
Confidence 999999999999988 765 4688999999999999999999999999999999999999999888888888
Q ss_pred hhHHHhh--------hccCchHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhc
Q 011529 248 AFSPFLI--------HRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILS 319 (483)
Q Consensus 248 ~~~~~l~--------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (483)
.+++.+. +.+|||+.|++..+...+ . +...+..+ +.+ +..++. . ++..+..++...+
T Consensus 171 ~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~~~-~---~~~~~~~~-e~~---~~~~~~----~---~~~~~~~~~~~~~ 235 (434)
T PRK15075 171 LLGYLLNQWLSPAQMAEWGWRIPFLIGCLIVPF-I---FLIRRSLE-ETE---EFLARK----H---RPSMREIFRSLAA 235 (434)
T ss_pred HHHHHHHHhCCHHHHhccchHHHHHHHHHHHHH-H---HHHHHhcC-CCH---HHHHhh----h---ccccccHHHHHHH
Confidence 8777652 468999999875433211 1 11111111 110 000000 0 0011122444455
Q ss_pred ChhHHHH-HHHHHHHHHHHHHHHHhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcC
Q 011529 320 KPPVWAL-IVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKG 388 (483)
Q Consensus 320 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~ 388 (483)
+++.+.. .+..++.....+.+..|.|.|+++.+|++..+.++...+..++.+++.++.|++.||+++|+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~ 305 (434)
T PRK15075 236 NWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRP 305 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchH
Confidence 6555543 33334455566778899999999888999999988888888999999999999999999885
No 45
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.97 E-value=2.9e-27 Score=231.02 Aligned_cols=266 Identities=17% Similarity=0.186 Sum_probs=219.4
Q ss_pred HHHHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHH
Q 011529 106 VVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATAL 185 (483)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 185 (483)
+.......+........+.+.+|.+.+++|.+..+.++..+.+.++..+++++.|+++||+|||+.+..+.++..++.++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~ 84 (392)
T PRK10473 5 LLCSFALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLL 84 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHH
Confidence 34444555556666667778899999999999999999999999999999999999999999999999999999999998
Q ss_pred hhhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHH
Q 011529 186 TPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYS 265 (483)
Q Consensus 186 ~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~ 265 (483)
+.+.+ +++.+++.|++.|++.+...+...+++.|.+|+++|+++.++.+....+|..++|.+++.+.+..+|++.|++
T Consensus 85 ~~~~~--~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~ 162 (392)
T PRK10473 85 CSLAE--TSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYT 162 (392)
T ss_pred HHHhC--cHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHH
Confidence 88888 8899999999999999988999999999999999999999999999999999999999998888999999999
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChhHHHHHHHHHHHHHHHHHHHHhhH
Q 011529 266 FGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMP 345 (483)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (483)
.+++.++..++.+...+++++++++.+... ....++.++++.++...+...+.......+..+.|
T Consensus 163 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (392)
T PRK10473 163 MAAMGILVLLLSLFILKETRPARAPAASSK---------------PRENSESLLNRFFLSRLVITTLSVTVILTFVNTSP 227 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCCCcccCCccch---------------HHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCH
Confidence 888877776665555555432211111000 11234567888877666665555555556667788
Q ss_pred HHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcC
Q 011529 346 TYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKG 388 (483)
Q Consensus 346 ~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~ 388 (483)
.++++.+|+++.+.+.+.+..+++.+++.++.+++.||+++|+
T Consensus 228 ~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~ 270 (392)
T PRK10473 228 VLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRT 270 (392)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH
Confidence 8888888999999999999999999999999999999999884
No 46
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.96 E-value=2.8e-27 Score=229.84 Aligned_cols=320 Identities=15% Similarity=0.063 Sum_probs=230.5
Q ss_pred HHHHHHhhhhhhhHHhhhh-hhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHH-HHHHHHHHHHHhhh
Q 011529 111 SAFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGF-GVVWWSIATALTPV 188 (483)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~-~~~~~~~~~~~~~~ 188 (483)
+.+++..+......+.+|. +.+++|.|+.++|++.+++.+...+.+++.|+++||+||||.++. +.++..++.+++.+
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~ 83 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAW 83 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHh
Confidence 4466677777788888887 578899999999999999999999999999999999999887654 55666667777778
Q ss_pred hhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHH--HHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHHH
Q 011529 189 AAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRS--LALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSF 266 (483)
Q Consensus 189 ~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~--~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~ 266 (483)
++ +++.+++.|++.|.+.+...|...++..|+.|+++|++. .+......++|..+||.+++.+.+..+||+.|++.
T Consensus 84 ~~--~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~ 161 (375)
T TIGR00899 84 NR--NYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTA 161 (375)
T ss_pred cc--hHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHH
Confidence 87 889899999999888788888888899998877777654 68888889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHH
Q 011529 267 GSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPT 346 (483)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (483)
+++.++..+..++..|+.+++.++.++ ..+.++.+++|.++...+..++..........++|.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (375)
T TIGR00899 162 ALAFVLCGVLVWLFLPSYPRGAPGALT-----------------RLEVRGLLASRDTRLLFVACTLMWGCNILYIINMPL 224 (375)
T ss_pred HHHHHHHHHHHHHhCCCcccCcccccC-----------------cchhhhhhcCcchHHHHHHHHHHHHHHHHHHhhhHH
Confidence 888777766665555554332111000 112334567777776666666555556666778899
Q ss_pred HHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHH
Q 011529 347 YYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCM 426 (483)
Q Consensus 347 ~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (483)
|+++.+|.++.+.+.+.....+..+++.++.|++.||+++|+... . +.+............++.+..+...
T Consensus 225 ~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~-------~--~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (375)
T TIGR00899 225 LIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLML-------L--AALAGVAFYTGLAADNSLWALLMLQ 295 (375)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHH-------H--HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998889999999998888777778888999999999999885322 1 1111111111111222333333333
Q ss_pred HHhhhhhhhhhchhhhhHhhhccCcceeeeee
Q 011529 427 ACSQGTDAFSQSGLYSNHQDIAPRYSVSIISI 458 (483)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 458 (483)
.+.+...+...+.......+..|++++.+++.
T Consensus 296 ~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 327 (375)
T TIGR00899 296 LLNAIFIGILAGIGMLYFQDLMPGRAGAATTL 327 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCcchhhHHHHH
Confidence 33333333344555566777778777777764
No 47
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.96 E-value=6.9e-27 Score=228.09 Aligned_cols=326 Identities=14% Similarity=0.134 Sum_probs=237.7
Q ss_pred HHHHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHH
Q 011529 106 VVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATAL 185 (483)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 185 (483)
+..++..+++.++.....++.+|.+++++|.+..+.|++.+.+.+++.+++++.|++.||+|||+++.++.++.+++.++
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l 84 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFL 84 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHH
Confidence 45566677777888888899999999999999999999999999999999999999999999999999999999999887
Q ss_pred hhhhh-cccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhc--------
Q 011529 186 TPVAA-KLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR-------- 256 (483)
Q Consensus 186 ~~~~~-~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-------- 256 (483)
+..+. ..+++.+++.|++.|+|.+...+..+.++.+..|+++|++..++.+...++|..+||.+++.+...
T Consensus 85 ~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~ 164 (410)
T TIGR00885 85 FWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQD 164 (410)
T ss_pred HHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhh
Confidence 64432 127899999999999999999999999999999999999999999999999999999999877532
Q ss_pred ------------------cCchHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhh
Q 011529 257 ------------------FGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLIL 318 (483)
Q Consensus 257 ------------------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (483)
.+||++|++.+++.++..++..+. +.++.++++ + ++ .....+.++++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~-~~p~~~~~~-~--~~-----------~~~~~~~~~~~ 229 (410)
T TIGR00885 165 VLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLT-KMPALNHSD-A--KQ-----------ISFSASLSRLA 229 (410)
T ss_pred hhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCCCccc-c--cc-----------ccchhhHHHHH
Confidence 359999998888777655444322 111111110 0 00 00011345678
Q ss_pred cChhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHh-CCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHH
Q 011529 319 SKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVL-HFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKI 397 (483)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~~~~~~~~~~ 397 (483)
|+|.++...+..+++...+....++++.|.++.. +.+....+...+....+..+|+++++++.||+++|+.
T Consensus 230 ~~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~-------- 301 (410)
T TIGR00885 230 RIRHYREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKV-------- 301 (410)
T ss_pred hChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHH--------
Confidence 9999998888888888888888899999997632 3344444556666778889999999999999987742
Q ss_pred HHHHHHHHHHHHHHHhhccchhHHHHHHHHHhhhhhhhhhchhhhhHhhhccCcceeee
Q 011529 398 MQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSVSII 456 (483)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 456 (483)
+. +..++.....+.....+.......+..++ ++.....|...+...+..+++...+.
T Consensus 302 l~-i~~~~~~~~~ll~~~~~~~~~~~~l~~~g-lf~s~~fp~i~sl~~~~~g~~~~~~s 358 (410)
T TIGR00885 302 LM-AYAIIGMALCLGSIFAGGHVGLYCLTLCS-AFMSLMFPTIYGIALKGLGQDTKYGA 358 (410)
T ss_pred HH-HHHHHHHHHHHHHHHcCChHHHHHHHHHH-HHHHHHHHHHHHHHHhhhhhhhhhhH
Confidence 11 11111111222222222223333333444 34444457777777776666654433
No 48
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.96 E-value=6.1e-27 Score=236.09 Aligned_cols=285 Identities=16% Similarity=0.227 Sum_probs=209.5
Q ss_pred ChhHHHHHHHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHH
Q 011529 100 PKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWW 179 (483)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 179 (483)
+++|+.+..+++..++..++.....+.+|.+.+++|.++.+.+++.+.+.++..++.++.|+++||+|||+++..+.++.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 95 (496)
T PRK03893 16 RAQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLF 95 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 35667788888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCc
Q 011529 180 SIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGW 259 (483)
Q Consensus 180 ~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~ 259 (483)
+++.+++.+.+ +++.+++.|++.|++.+...+....++.|++|+++|++++++......+|..++|.+.+.+.+.++|
T Consensus 96 ~~~~~~~~~~~--~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w 173 (496)
T PRK03893 96 SVGTLACGFAP--GYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGW 173 (496)
T ss_pred HHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCH
Confidence 99999988888 8999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccCCCCCCCC-CChhhHHHhhhcccCCCCCcccch----------hhhh----------
Q 011529 260 PSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQ-LRPAEKKLIVSSCASKEPVKTIPW----------GLIL---------- 318 (483)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~---------- 318 (483)
|+.|++.++..++. +......++.++..++ .++.+.+...+.....++ +.... ...+
T Consensus 174 ~~~f~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (496)
T PRK03893 174 RALFFIGILPIIFA-LWLRKNLPEAEDWKEKHAGKAPVRTMVDILYRGEH-RIINILLTLAAAAALWFCFAGNLQNAAIV 251 (496)
T ss_pred HHHHHHHHHHHHHH-HHHHHhCCCchhhhhhccccccchhHHHHHhcchh-HHHHHHHHHHHHHHHHHHHHhhhcchhHH
Confidence 99998754433322 2222222322110000 000000000000000000 00000 0000
Q ss_pred ---------------------cChhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHH
Q 011529 319 ---------------------SKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLG 377 (483)
Q Consensus 319 ---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~ 377 (483)
+.+......+..+...........++|.|+++.+|++..+.+.+.+...++.+++.++.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~ 331 (496)
T PRK03893 252 AVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVG 331 (496)
T ss_pred HHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000000011111111112345788999987799999999999999999999999999
Q ss_pred HHHHHHHhhcC
Q 011529 378 GWIADTLVSKG 388 (483)
Q Consensus 378 g~l~dr~g~~~ 388 (483)
|++.||+++|+
T Consensus 332 g~l~dr~g~~~ 342 (496)
T PRK03893 332 GFLGDWLGTRK 342 (496)
T ss_pred HHHHHHhcchH
Confidence 99999999884
No 49
>PRK09952 shikimate transporter; Provisional
Probab=99.96 E-value=1.3e-26 Score=228.96 Aligned_cols=274 Identities=17% Similarity=0.174 Sum_probs=201.8
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhHHhhhh-hhhhc--CCChhhHHHHH-----HHHHHHHHHHHhhHHHHHhhcCCchHH
Q 011529 101 KRWFIVVLCFSAFLLCNMDRVNMSIAILP-MSAEF--NWNPATVGLIQ-----SSFFWGYLLTQIAGGIWADTVGGKAVL 172 (483)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--g~s~~~~g~~~-----~~~~~~~~~~~~~~g~l~dr~g~r~~~ 172 (483)
++++.+...+++.++.+++...++...|. +.+++ +.++. .+++. ++..++..+++++.|+++||+|||+++
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l 97 (438)
T PRK09952 19 RARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRML 97 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHH
Confidence 34456777888999999999998888775 55555 66665 45543 345566778899999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhcccHH--------HHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHH
Q 011529 173 GFGVVWWSIATALTPVAAKLGLP--------FLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSV 244 (483)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~--------~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ 244 (483)
.++.++.+++.+++++++ +++ .++++|+++|++.+..++....++.|++|+++|++..+..+.+..+|.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~ 175 (438)
T PRK09952 98 MLTVWMMGIATALIGLLP--SFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLL 175 (438)
T ss_pred HHHHHHHHHHHHHHhcCC--cHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHH
Confidence 999999999999999998 765 5888999999999999999999999999999999999999999999999
Q ss_pred HHHhhHHHhh--------hccCchHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhh
Q 011529 245 TGLAFSPFLI--------HRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGL 316 (483)
Q Consensus 245 ~g~~~~~~l~--------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (483)
++..+...+. ..+|||+.|++.++..++.. ......+|+++. . +++. +.++ .+.+....+.
T Consensus 176 l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~~-~l~~~~~es~~~----~-~~~~----~~~~-~~~~~~~~~~ 244 (438)
T PRK09952 176 LSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIAL-WVRNGMEESAEF----E-QQQH----EQAA-AKKRIPVIEA 244 (438)
T ss_pred HHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHHH-HHHHhCCCChhH----H-HHHh----hccc-ccccCCHHHH
Confidence 9887776654 25799999998776654322 211122222110 0 0000 0000 0001112334
Q ss_pred hhcChhHHHHHH-HHHHHHHHHHHHHHhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcC
Q 011529 317 ILSKPPVWALIV-SHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKG 388 (483)
Q Consensus 317 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~ 388 (483)
++++|+.+...+ ..++.....+....|.|.|+++.+|++......+....++..+++.++.|+++||++||+
T Consensus 245 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~ 317 (438)
T PRK09952 245 LLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRR 317 (438)
T ss_pred HHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchH
Confidence 667777666544 445556667778889999998888988876655566667778889999999999999885
No 50
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.96 E-value=6e-27 Score=227.98 Aligned_cols=266 Identities=12% Similarity=0.038 Sum_probs=205.3
Q ss_pred HHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhh
Q 011529 108 LCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTP 187 (483)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~ 187 (483)
.++++.++..++...+....+.+.++++.++.+.+++.+.+.+++.++.+++|+++||+|||++++++.++.+++.+.+.
T Consensus 7 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~ 86 (393)
T PRK11195 7 AIMAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLML 86 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHH
Confidence 45566777777666666666777899999999999999999999999999999999999999999999999988888776
Q ss_pred hhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHHHH
Q 011529 188 VAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFG 267 (483)
Q Consensus 188 ~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~ 267 (483)
+.. +. ++.|+++|++.+...|+..+++.|++|+++|++++|+.+....+|.++||.++|++.+. .|+..+.+.+
T Consensus 87 ~~~--~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~ 160 (393)
T PRK11195 87 FGI--HP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP-HAEAALAVCA 160 (393)
T ss_pred HHH--HH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 665 43 67899999999999999999999999999999999999999999999999999999885 4777777666
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHH
Q 011529 268 SLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTY 347 (483)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (483)
...++..+.. ...++.+.++++.+.+......+ ....++.++++|.++.......+...........+|.|
T Consensus 161 ~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (393)
T PRK11195 161 LIYLLAALFN-LFIPRLGARRPGQSWNPIALLRD--------FFHACRVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAW 231 (393)
T ss_pred HHHHHHHHHH-hcCCCCcccccccCCCHHHHHHH--------HHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5544443333 33444332211111111000000 01124567888887766555555555556666777888
Q ss_pred HHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcC
Q 011529 348 YNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKG 388 (483)
Q Consensus 348 ~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~ 388 (483)
+++.+|.++.+.|++.+..+++.+++.++.+++.||.++++
T Consensus 232 ~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~ 272 (393)
T PRK11195 232 APVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLR 272 (393)
T ss_pred HHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc
Confidence 88889999999999999999999999999999999877664
No 51
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.96 E-value=4.2e-29 Score=231.23 Aligned_cols=282 Identities=18% Similarity=0.232 Sum_probs=232.5
Q ss_pred CChhHHHHHHHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHH
Q 011529 99 FPKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVW 178 (483)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 178 (483)
.+..++.+.++++..++++.+.+.+.-..+.+.+.+|+++...|++.+.+.+.+.++.|++|+++||+.||+++.+|..+
T Consensus 28 ~~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~i 107 (493)
T KOG1330|consen 28 MKSPTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFI 107 (493)
T ss_pred cccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHH
Confidence 34556678888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccC
Q 011529 179 WSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG 258 (483)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g 258 (483)
+.++.+..+++. .+|+++++|.+.|+|.+.+.++++++++|.+|.++|++.+++++.+..+|..+|.+.++.+.+..+
T Consensus 108 W~~Av~~~~fs~--~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~ 185 (493)
T KOG1330|consen 108 WTLAVFASGFSN--HFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTF 185 (493)
T ss_pred HHHHHHHHHHHH--HHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCcc
Confidence 999999999998 999999999999999999999999999999999999999999999999999999999999888766
Q ss_pred -chHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChhHHHHHHHHHHHHHHH
Q 011529 259 -WPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGT 337 (483)
Q Consensus 259 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (483)
|||.|+..+++.+++.++.+++.+++++...++...+.+ ..........+.+.+.|+|.+....+......+..
T Consensus 186 ~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~~~~~~~-----~~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~ 260 (493)
T KOG1330|consen 186 WWRWAFRGSAVLGVIVGLLVFLFVREPERGARDEVDGENK-----MVKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVI 260 (493)
T ss_pred ceEEEEEeehHHHHHHHHHHHhhccCcccccccccccCCc-----CCCCccchHHHHHHHHccCceeeehHHHHHHHHhc
Confidence 999999999999999999888888765432221111110 00111112334555667777766666666666666
Q ss_pred HHHHHhhHHHHHHH---hCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhc
Q 011529 338 FILLTWMPTYYNQV---LHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSK 387 (483)
Q Consensus 338 ~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~ 387 (483)
..+.-|.|.++... .|.+..+..++..+...++.+|.+++|.++||+.++
T Consensus 261 Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~ 313 (493)
T KOG1330|consen 261 GSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRI 313 (493)
T ss_pred cccchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHh
Confidence 66666666665543 355666666777778889999999999999996543
No 52
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.96 E-value=3.9e-27 Score=231.94 Aligned_cols=326 Identities=16% Similarity=0.106 Sum_probs=231.2
Q ss_pred HHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhh--
Q 011529 111 SAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPV-- 188 (483)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~-- 188 (483)
...++..+......+.+|.+.++++.++.+.|++.+.+.++..+++++.|+++||+|||+++..+.++.+++.+....
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~ 103 (417)
T PRK10489 24 IARFISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNA 103 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHH
Confidence 335555666677788889988999999999999999999999999999999999999999998888777776654432
Q ss_pred -hhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHHHH
Q 011529 189 -AAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFG 267 (483)
Q Consensus 189 -~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~ 267 (483)
....+++.+++.|++.|++.+...+...+++.+++|+++|+++.++.+....+|..+||.+++.+.+..+|++.|++.+
T Consensus 104 ~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~ 183 (417)
T PRK10489 104 FLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAA 183 (417)
T ss_pred HcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHH
Confidence 1112788889999999999888888889999999999999999999999999999999999999999889999998877
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHH
Q 011529 268 SLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTY 347 (483)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (483)
+..++..++.+.. ++.++++++.++. .+ .....++.++++|.++...+..++... ......++|.|
T Consensus 184 ~~~~~~~~~~~~l-~~~~~~~~~~~~~-~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~ 249 (417)
T PRK10489 184 AGTFITLLPLLRL-PALPPPPQPREHP-LR-----------SLLAGFRFLLASPVVGGIALLGGLLTM-ASAVRVLYPAL 249 (417)
T ss_pred HHHHHHHHHHHhC-CCCCCCCcccccc-hH-----------HHHHHHHHHHcChHHHHHHHHHHHHHH-HHhHHHhhHHH
Confidence 7766655544433 3322211111000 00 001235567788887766555544333 45677889999
Q ss_pred HHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHH
Q 011529 348 YNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMA 427 (483)
Q Consensus 348 ~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (483)
+++.+|.++.+.+++.+...++.+++.++.+++.||.++++. +..+.++....+......++.+...++..
T Consensus 250 ~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~---------l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (417)
T PRK10489 250 ADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLL---------MLLSTLGSFLAVGLFGLMPMWILAVLCLA 320 (417)
T ss_pred HHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchH---------HHHHHHHHHHHHHHHHccchHHHHHHHHH
Confidence 999889999999999999999999999999999998554421 11111222222222223333333333333
Q ss_pred HhhhhhhhhhchhhhhHhhhcc-Ccceeeeeee
Q 011529 428 CSQGTDAFSQSGLYSNHQDIAP-RYSVSIISIN 459 (483)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~ 459 (483)
+.+...+...+...+..++..| +.+|+++|+.
T Consensus 321 ~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~ 353 (417)
T PRK10489 321 LFGYLSAISSLLQYTLLQTQTPDEMLGRINGLW 353 (417)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHH
Confidence 3333333334445566666655 5689888843
No 53
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.96 E-value=3.3e-26 Score=224.14 Aligned_cols=259 Identities=20% Similarity=0.206 Sum_probs=195.5
Q ss_pred HHHHHHHHHHHHHhhhhhhhHHhhhh-hhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHH
Q 011529 104 FIVVLCFSAFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIA 182 (483)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 182 (483)
+.+..+.+..++..++..+..+.+|. +.+++|.|+.++|++.+++.++..+++++.|+++||+|||+++..+.++.+++
T Consensus 15 ~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~ 94 (399)
T PRK05122 15 LRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALS 94 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHH
Confidence 34556677777888888888888887 67889999999999999999999999999999999999999999999888776
Q ss_pred HHHhhhh---hc---ccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhc
Q 011529 183 TALTPVA---AK---LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR 256 (483)
Q Consensus 183 ~~~~~~~---~~---~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 256 (483)
.+.+.+. +. .+++.+++.|++.|++.+...+...+++.|++|+++|++++++.+....+|.++|+.+++.+.+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~ 174 (399)
T PRK05122 95 GLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHW 174 (399)
T ss_pred HHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHc
Confidence 6554432 10 14567899999999999999999999999999999999999999999999999999999999999
Q ss_pred cCchHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChhHHHHHHHHHHHHHH
Q 011529 257 FGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWG 336 (483)
Q Consensus 257 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (483)
.||+..+++..++.++..+.. . +.++.+++.+ + +.++++.++ .++.......+....
T Consensus 175 ~g~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~--~---------------~~~~~~~~~--~~~~~~~~~~~~~~~ 231 (399)
T PRK05122 175 GGLAGLGLLIMLLALLGLLLA-R---PRPAVPPVKG--E---------------RLPFRRVLG--RVWPYGMGLALASIG 231 (399)
T ss_pred ccHHHHHHHHHHHHHHHHHHH-h---cCCCCCCCCc--c---------------chhHHHHHH--HHHHHHHHHHHHHHH
Confidence 999998887666544333222 1 1111111100 0 001222232 223333333344555
Q ss_pred HHHHHHhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcC
Q 011529 337 TFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKG 388 (483)
Q Consensus 337 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~ 388 (483)
......+++.|+.+ .|. ...+...+...++.++++++.|++.||+++|+
T Consensus 232 ~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~ 280 (399)
T PRK05122 232 FGTIATFITLYYAA-RGW--DGAALALTLFGVAFVGARLLFGNLINRLGGLR 280 (399)
T ss_pred HHHHHHHHHHHHHH-ccc--ccchHHHHHHHHHHHHHHHHHHHHHHHhccHH
Confidence 66677888888876 565 34566677788889999999999999998774
No 54
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.96 E-value=7.1e-27 Score=234.57 Aligned_cols=286 Identities=19% Similarity=0.220 Sum_probs=204.7
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhHHhhhhhhhhcCCC--------hhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHH
Q 011529 102 RWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWN--------PATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLG 173 (483)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s--------~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~ 173 (483)
.+....++.++.++..++...+...++.+..+++.+ ..+.+++.+++.++..++++++|+++||+|||+++.
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~ 105 (481)
T TIGR00879 26 VALLSLIAAIGGLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLL 105 (481)
T ss_pred HHHHHHHHHHHHHhcccccchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHH
Confidence 344444455566677778888888888888888777 899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhc-ccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhH--
Q 011529 174 FGVVWWSIATALTPVAAK-LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFS-- 250 (483)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~-- 250 (483)
++.++..++.+++.+... .+++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|..+++.++
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~ 185 (481)
T TIGR00879 106 IIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSG 185 (481)
T ss_pred HHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 999999998888755431 24568999999999999999999999999999999999999999999999999999998
Q ss_pred -HHhhhccCchHHHHHHHHHHHHHHHHHHHhccCCCCC--CCCCChhhHHHhhhcccCC--------------------C
Q 011529 251 -PFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAE--DPQLRPAEKKLIVSSCASK--------------------E 307 (483)
Q Consensus 251 -~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~--------------------~ 307 (483)
+...+..+||+.|++.++..++..+.. .+.++.+.. .++..++..+...+..... .
T Consensus 186 ~~~~~~~~~w~~~f~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (481)
T TIGR00879 186 KVSLNNTLGWRIPLGLQLIPAGLLFLGL-FFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEK 264 (481)
T ss_pred hhcCCCCccHHHHHHHHHHHHHHHHHHH-hcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHH
Confidence 666677899999999666555544433 334443321 0000000000000000000 0
Q ss_pred CCcccchhhhhc------ChhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHH
Q 011529 308 PVKTIPWGLILS------KPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIA 381 (483)
Q Consensus 308 ~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~ 381 (483)
......++..++ .+.++...+..+........+..+.|.++++ .|++..+.+.......++.+++.++.+++.
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~ 343 (481)
T TIGR00879 265 RSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFEN-AGVSTDHAFLVSIIVGAVNFAFTFVAIFLV 343 (481)
T ss_pred hhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHH-cCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000011222222 2223333333333333344556677777766 799998888888899999999999999999
Q ss_pred HHHhhcCC
Q 011529 382 DTLVSKGL 389 (483)
Q Consensus 382 dr~g~~~~ 389 (483)
||+++|+.
T Consensus 344 d~~~~~~~ 351 (481)
T TIGR00879 344 DRFGRRPL 351 (481)
T ss_pred HHhcchHH
Confidence 99998853
No 55
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.96 E-value=3.2e-26 Score=222.51 Aligned_cols=323 Identities=9% Similarity=0.002 Sum_probs=236.9
Q ss_pred HHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHH-HHHHHH-HHh
Q 011529 109 CFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVV-WWSIAT-ALT 186 (483)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~-~~~~~~-~~~ 186 (483)
+.+.++..+.......|++|.+.+++|.|..++|++.+++.+...++++++|+++||+||+........ ...+.. ...
T Consensus 9 l~~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~~~ 88 (382)
T TIGR00902 9 LALGFFGYFCAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAAFS 88 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHH
Confidence 445566667777888899999999999999999999999999999999999999999998543321111 111111 223
Q ss_pred hhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHHH
Q 011529 187 PVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSF 266 (483)
Q Consensus 187 ~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~ 266 (483)
..++ +++.+++.|++.|.+.+...|...++..++ +++|++.+|......++|.+++|.+++.+.+++|||..|++.
T Consensus 89 ~~~~--~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~ 164 (382)
T TIGR00902 89 AGAH--NAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAIL 164 (382)
T ss_pred Hhhh--hHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHH
Confidence 3456 899999999999999888889888887664 578899999999999999999999999999999999999887
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHH
Q 011529 267 GSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPT 346 (483)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (483)
++..++.. ......++.++++++ ++++ .....++++++|+|++|...+..++.......+..+.|.
T Consensus 165 ~~~~~~~~-~~~~~~~~~~~~~~~-~~~~------------~~~~~~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~ 230 (382)
T TIGR00902 165 TAGLAFML-IGFLIKPTIPPKDAI-PEDE------------SQGDSAFIALLKNPMNLRFLAAVCLIQGAHAAYYGFSAI 230 (382)
T ss_pred HHHHHHHH-HHHHcCCCCCCCccc-cccc------------cccchhHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65533332 233333321111111 0000 011224667899999999999889988999999999999
Q ss_pred HHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHH
Q 011529 347 YYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCM 426 (483)
Q Consensus 347 ~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (483)
|+++ .|.++.++|.+..+..++.+++.++.+++.||++.|+ .+..+.+.....+......++.+..+...
T Consensus 231 ~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~---------~l~~~~~~~~~~~~~~~~~~~~~~~~~~q 300 (382)
T TIGR00902 231 YWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARD---------LLLISAIACVGRWAIIGAIEAFPLIFLLQ 300 (382)
T ss_pred HHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHH---------HHHHHHHHHHHHHHHHHhHhhHHHHHHHH
Confidence 9987 8999999999999989999999999999999999773 33344444444444444455555555555
Q ss_pred HHhhhhhhhhhchhhhhHhhhccCcceeeeeee
Q 011529 427 ACSQGTDAFSQSGLYSNHQDIAPRYSVSIISIN 459 (483)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 459 (483)
.+-+...+...+....+..+.++++++++.++.
T Consensus 301 ~l~g~~~~~~~~~~~~~i~~~~~~~~~~~q~~~ 333 (382)
T TIGR00902 301 ILHCGTFAVCHLAAMRYIAAQPGSEIAKLQALY 333 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHhhHHHHHHHH
Confidence 555555555555566666666555677766643
No 56
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.96 E-value=1.2e-25 Score=218.53 Aligned_cols=260 Identities=17% Similarity=0.112 Sum_probs=207.1
Q ss_pred HHHHHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHH
Q 011529 105 IVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATA 184 (483)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 184 (483)
.+..++++.++.........+.+|.+.+++|.|..++|++.+.+.++..+++++.|+++||+|||+++..+.++.+++.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~ 86 (381)
T PRK03633 7 PVLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCA 86 (381)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35566677888888889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHH
Q 011529 185 LTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFY 264 (483)
Q Consensus 185 ~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~ 264 (483)
.+.+.+ +++.+++.|++.|++.+...+...+.+.+..++++|++++++.+...++|..+||.+++.+.+...+...+.
T Consensus 87 ~~~~~~--~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~ 164 (381)
T PRK03633 87 GLGLMV--GFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVLPWV 164 (381)
T ss_pred HHHHhc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchHHHH
Confidence 888888 999999999999999998888888888899999999999999999999999999999999877543333322
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChhHHHHHHHHHHHHHHHHHHHHhh
Q 011529 265 SFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWM 344 (483)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (483)
.+.......... +. +.++++.++ + +..+.++.+++|.++......+.....+.....++
T Consensus 165 -~~~~~~~~~~~~-~~-~~~~~~~~~-~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 223 (381)
T PRK03633 165 -TGLVLAAILPLL-FT-RILNQQAEN-H-----------------DSTSIWPMLKLRQARLGVNGCIISGIVLGSLYGLM 223 (381)
T ss_pred -HHHHHHHHHHHH-Hh-cccCCCCCC-C-----------------CCCCHHHHHHhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 222222211121 11 111111000 0 01234566788887765554555555566677889
Q ss_pred HHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcC
Q 011529 345 PTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKG 388 (483)
Q Consensus 345 ~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~ 388 (483)
|.|+++ .|.++.+.+.+.+...++.+++++..|++.||+++|+
T Consensus 224 p~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~ 266 (381)
T PRK03633 224 PLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLL 266 (381)
T ss_pred HHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHH
Confidence 999987 6999999999999999999999999999999999874
No 57
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.96 E-value=1.9e-25 Score=217.97 Aligned_cols=320 Identities=13% Similarity=0.079 Sum_probs=225.1
Q ss_pred HHHHHHhhhhhhhHHhhhh-hhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhh
Q 011529 111 SAFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVA 189 (483)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 189 (483)
...++.........+.++. +.+++|.|..++|++.+...+...+.+++.|+++||+|||+++..+.++.+++.+.+.+.
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~ 96 (400)
T PRK11646 17 IDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIA 96 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHh
Confidence 4444445555555666655 678999999999999999999999999999999999999999999999999999998888
Q ss_pred hcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHHHHHH
Q 011529 190 AKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSL 269 (483)
Q Consensus 190 ~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~ 269 (483)
+ +++.+++.|++.|++.+...+...+++.+++|+++|++++|+.+....+|..+||.+++.+. .++|++.|++.++.
T Consensus 97 ~--~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~ 173 (400)
T PRK11646 97 H--EPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVL 173 (400)
T ss_pred c--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHH
Confidence 7 89999999999999998888999999999999999999999999999999999999999998 67999999998877
Q ss_pred HHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHHHH
Q 011529 270 GTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYN 349 (483)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (483)
.++..++.....++.+++ +. +++ ...++++++++|.++...+..+...........++|.|++
T Consensus 174 ~~~~~i~~~~~~~~~~~~-~~-~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 236 (400)
T PRK11646 174 FVLAAAFNAWLLPAYKLS-TV-RTP---------------VREGMTRVLRDKRFVTYVLTLTGYYMLAVQVMLMLPIMVN 236 (400)
T ss_pred HHHHHHHHHHhCCccccc-cc-chh---------------hHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHhhhhhHH
Confidence 776655544444332111 00 000 0124567788988877666555544444455678899998
Q ss_pred HHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHH-HhhcCCchhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHH
Q 011529 350 QVLHFNLTESGLFCVLPWLTMAFSANLGGWIADT-LVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMAC 428 (483)
Q Consensus 350 ~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (483)
+. +.++.+.+++.+...++...+....+++.|| ++.++ ... .+..+...........++.+.......+
T Consensus 237 ~~-~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~-------~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~l 306 (400)
T PRK11646 237 DI-AGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEH-------RLM--AGLLIMSLSMFPIGMVSNLQQLFTLICL 306 (400)
T ss_pred hh-cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhH-------HHH--HHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 85 4477888888888777666655555666554 44331 111 2222222222222222333333222222
Q ss_pred hhhhhhhhhchhhhhHhhhc-cCcceeeeeeee
Q 011529 429 SQGTDAFSQSGLYSNHQDIA-PRYSVSIISINI 460 (483)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~ 460 (483)
.........+.......+.. ++++|+++|...
T Consensus 307 ~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~ 339 (400)
T PRK11646 307 FYIGSIIAEPARETLSASLADARARGSYMGFSR 339 (400)
T ss_pred HHHHHHHHHccHHHHHHhcCCcccchhhhhHHH
Confidence 22223344455566666655 577999998443
No 58
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.95 E-value=2.2e-25 Score=219.16 Aligned_cols=327 Identities=17% Similarity=0.141 Sum_probs=227.5
Q ss_pred HHHHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhh-----HHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHH
Q 011529 106 VVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPAT-----VGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWS 180 (483)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~-----~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 180 (483)
...++++.++.........+.+|.+.+++|.+..+ .|++.+++.++..+++++.|+++||+|||+++..+.++.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 95 (408)
T PRK09874 16 LTVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMG 95 (408)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHH
Confidence 34455666777778888889999999999988654 4889999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCch
Q 011529 181 IATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWP 260 (483)
Q Consensus 181 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~ 260 (483)
++.+++.+.+ +++.+++.|++.|++.+ ..+....++.+.+|+++|++++++.+....+|..++|.+++.+.+..+|+
T Consensus 96 ~~~~~~~~~~--~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ 172 (408)
T PRK09874 96 IVMVLMGLAQ--NIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLR 172 (408)
T ss_pred HHHHHHHHHh--hHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH
Confidence 9888888877 89999999999999855 56777889999999999999999999999999999999999999989999
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChhHHHH-HHHHHHHHHHHHH
Q 011529 261 SVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWAL-IVSHFCHNWGTFI 339 (483)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 339 (483)
+.|++.+++.++..+..+...++++++.++.+..+. .+..+.+++++++.. ....+........
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (408)
T PRK09874 173 PVFFITASVLFLCFLVTLFCIRENFQPVSKKEMLHM---------------REVVTSLKNPKLVLSLFVTTLIIQVATGS 237 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCcccccchhhhHH---------------HHHHHhCcCCchHHHHHHHHHHHHHHHHH
Confidence 999998888777666665555554322111111000 012234566666543 3333444445556
Q ss_pred HHHhhHHHHHHHhCCCcc---hhhHHhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhcc
Q 011529 340 LLTWMPTYYNQVLHFNLT---ESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHV 416 (483)
Q Consensus 340 ~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (483)
...+++.|..+..+.... ..+.+..+.+++.+++.+..|++.||+++|+... . +..............
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~-------~--~~~~~~~~~~~~~~~ 308 (408)
T PRK09874 238 IAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILI-------T--ALIFSVLLLIPMSFV 308 (408)
T ss_pred HHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHH-------H--HHHHHHHHHHHHHHh
Confidence 667788888875432221 2355566667888889999999999999885322 1 111111122222222
Q ss_pred chhHHHHHHHHHhhhhhhhhhchhhhhHhhh-ccCcceeeeeee
Q 011529 417 DSPAMAVLCMACSQGTDAFSQSGLYSNHQDI-APRYSVSIISIN 459 (483)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~ 459 (483)
+..+...+...+.+...+...+.......+. +++++|+.++..
T Consensus 309 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 352 (408)
T PRK09874 309 QTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYN 352 (408)
T ss_pred ccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHH
Confidence 2333333333333333334445455555554 456789888844
No 59
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.95 E-value=2.8e-26 Score=230.25 Aligned_cols=351 Identities=14% Similarity=0.125 Sum_probs=226.3
Q ss_pred ChhHHHHHHHHHHHHHHhhhhhhhHHhhhhhhhhc--------CCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchH
Q 011529 100 PKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEF--------NWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAV 171 (483)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 171 (483)
+...+..+++.++.+..+++...+++..|.+.+++ +.+..+.+++.+++.++..++++++|+++||+|||++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~ 87 (479)
T PRK10077 8 SYIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDS 87 (479)
T ss_pred hHHHHHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 34556667777788899999999998888888877 8899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhh---------h-cccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHh
Q 011529 172 LGFGVVWWSIATALTPVA---------A-KLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYL 241 (483)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~---------~-~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 241 (483)
++++.++.+++.+..++. + ...++.+++.|+++|++.+...+...+++.|++|+++|++++++.+.+..+
T Consensus 88 ~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~ 167 (479)
T PRK10077 88 LKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIF 167 (479)
T ss_pred HHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHH
Confidence 999999988887776653 1 013567889999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhHHHhh--------hccCchHHHHHHHHHHHHHHHHHHHhccCCCCCC-CCCChhhHHHhhhccc-CCCC-Cc
Q 011529 242 GSVTGLAFSPFLI--------HRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAED-PQLRPAEKKLIVSSCA-SKEP-VK 310 (483)
Q Consensus 242 g~~~g~~~~~~l~--------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~-~~ 310 (483)
|.++++.+++.+. +..|||+.|++.++..++..+.. +..+++++.. .+.+.++.+...+... ..+. ..
T Consensus 168 G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~-~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (479)
T PRK10077 168 GQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLL-YFVPETPRYLMSRGKQEQAEGILRKIMGNTLATQA 246 (479)
T ss_pred HHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHH-HcCCCCcHHHHHcCCHHHHHHHHHHHcCChhHHHH
Confidence 9999988776553 35689999998887777765444 4455554321 0111111100000000 0000 00
Q ss_pred ccchhhhhc-----ChhHHHH---------HHHHHHHHHHHHHHHHhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHH
Q 011529 311 TIPWGLILS-----KPPVWAL---------IVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANL 376 (483)
Q Consensus 311 ~~~~~~~~~-----~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~ 376 (483)
..+.++.++ .+..+.. ....+......+....+.|.+.++ .|++.....+.....++..+++.++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~-~g~~~~~~~~~~~~~~~~~~i~~~~ 325 (479)
T PRK10077 247 LQEIKHSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKT-LGASTDIALLQTIIVGVINLTFTVL 325 (479)
T ss_pred HHHHHHHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHH-cCCCCchHHHHHHHHHHHHHHHHHH
Confidence 000111111 0111100 011111111223344566777766 7888877777777788899999999
Q ss_pred HHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHH-Hhh--ccchhHHHHHHHHHhhhhhhhhhchhhhhHhhhcc-Ccc
Q 011529 377 GGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLT-QLS--HVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAP-RYS 452 (483)
Q Consensus 377 ~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 452 (483)
.+++.||+|+|+....+. .........+ ... .....+........+.+......+.......+..| +.|
T Consensus 326 ~g~l~dr~g~r~~~i~~~-------~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r 398 (479)
T PRK10077 326 AIMTVDKFGRKPLQIIGA-------LGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIR 398 (479)
T ss_pred HHHHHHHhcChHHHHHhH-------HHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHH
Confidence 999999999885332221 1111111111 111 11111222222222222222233556677777765 568
Q ss_pred eeeeeee
Q 011529 453 VSIISIN 459 (483)
Q Consensus 453 g~~~g~~ 459 (483)
+.++|++
T Consensus 399 ~~~~g~~ 405 (479)
T PRK10077 399 GKALAIA 405 (479)
T ss_pred HHHHHHH
Confidence 8888754
No 60
>PRK12382 putative transporter; Provisional
Probab=99.95 E-value=7.9e-26 Score=220.89 Aligned_cols=319 Identities=14% Similarity=0.129 Sum_probs=211.2
Q ss_pred HHHHHHHHHHHhhhhhhhHHhhhh-hhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHH
Q 011529 106 VVLCFSAFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATA 184 (483)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 184 (483)
+..+.++.++.........+.+|. +.+++|.|..++|++.+++.++..++++++|+++||+|||+++..+.+...++.+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~ 96 (392)
T PRK12382 17 LFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGL 96 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHH
Confidence 444455566666677777888886 6789999999999999999999999999999999999999999998887766544
Q ss_pred Hh---hhhh---cccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccC
Q 011529 185 LT---PVAA---KLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG 258 (483)
Q Consensus 185 ~~---~~~~---~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g 258 (483)
.. .+.+ ..+++.+++.|+++|++.+...+...+++.|++|+|+|++++++.+.+..+|..+||.+++.+.+..|
T Consensus 97 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g 176 (392)
T PRK12382 97 AYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFG 176 (392)
T ss_pred HHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 32 1111 12678899999999999998888889999999999999999999999999999999999999999899
Q ss_pred chHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChhHHHHHHHHHHHHHHHH
Q 011529 259 WPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTF 338 (483)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (483)
|+..+.+..+..++..... ...++.+++ + ++ + .+.++..+ .++...+..++......
T Consensus 177 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~-~~--~---------------~~~~~~~~--~~~~~~~~~~l~~~~~~ 233 (392)
T PRK12382 177 FAALALTTMVLPLLAWAFN-GTVRKVPAH--A-GE--R---------------PSLWSVVG--LIWKPGLGLALQGVGFA 233 (392)
T ss_pred hHHHHHHHHHHHHHHHHHH-HhccCCCCC--c-cc--C---------------chHHHHHH--HHHHhHHHHHHHHHHHh
Confidence 9987765544433322211 111111110 0 00 0 01112221 22222222333445555
Q ss_pred HHHHhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhccch
Q 011529 339 ILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDS 418 (483)
Q Consensus 339 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (483)
....+.|.|+++ .|++ ..+.......++.++++++.|++.||+++|+..... ..+........ ...++
T Consensus 234 ~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~-------~~~~~~~~~~~--~~~~~ 301 (392)
T PRK12382 234 VIGTFVSLYFAS-KGWA--MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVS-------LLVETVGLLLL--WLAPT 301 (392)
T ss_pred HHHHHHHHHHHh-cCCc--hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHH-------HHHHHHHHHHH--HHccc
Confidence 667788888877 5654 355666677788889999999999999988643322 11111111111 12223
Q ss_pred hHHHHHHHHHhhhhhhhhhchhhhhHhhh-ccCcceeeeeee
Q 011529 419 PAMAVLCMACSQGTDAFSQSGLYSNHQDI-APRYSVSIISIN 459 (483)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~ 459 (483)
.+..+....+.+...+...+.......+. +++++|++.|+.
T Consensus 302 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 343 (392)
T PRK12382 302 AWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGY 343 (392)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 33333333333333333344444454454 457789888854
No 61
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.95 E-value=7.8e-26 Score=217.98 Aligned_cols=317 Identities=13% Similarity=0.052 Sum_probs=226.2
Q ss_pred hhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhc-----CCchH-HHHHHHHHHHHHHHhhhhhc-cc
Q 011529 121 VNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTV-----GGKAV-LGFGVVWWSIATALTPVAAK-LG 193 (483)
Q Consensus 121 ~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-----g~r~~-~~~~~~~~~~~~~~~~~~~~-~~ 193 (483)
...++.+|.+.+++|+|.+++|+.... .+...+ .+++|+++||+ ||||. ++.+.++.++....+.+.+. .+
T Consensus 5 ~~~~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~ 82 (356)
T TIGR00901 5 GLVGNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTD 82 (356)
T ss_pred hhHHhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchh
Confidence 456778899999999999999999765 455554 99999999998 88887 56677777777666655531 25
Q ss_pred HHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccC--------chHHHHH
Q 011529 194 LPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG--------WPSVFYS 265 (483)
Q Consensus 194 ~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g--------~~~~~~~ 265 (483)
.+.+....++.+++.+...++..+++.|++|+|+|+++.++...+..+|.++++.+++.+.+..+ ||..|++
T Consensus 83 l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i 162 (356)
T TIGR00901 83 LPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFW 162 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHH
Confidence 66777778888888888899999999999999999999999999999999999999999988888 9999999
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChh---HHHHHHHHHHHHHHHHHHHH
Q 011529 266 FGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPP---VWALIVSHFCHNWGTFILLT 342 (483)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 342 (483)
.++..++..+..++..+|+.++.+. ++++++. ....+++++++|. ++...+..++..........
T Consensus 163 ~ai~~l~~~~~~~~~~~e~~~~~~~-~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (356)
T TIGR00901 163 TALLILPGLLVTLFLAKEPQEDASV-PKPLTQA-----------VLKPIREFFQRKNMIQALLLLLLIVLYKLGDSAATV 230 (356)
T ss_pred HHHHHHHHHHHHHHhccCCCccccc-chhHHHH-----------HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHH
Confidence 8887777655545444443221111 1111100 0124566777775 77777777777888888899
Q ss_pred hhHHHHHHHhCCCcchhhHHhHHHH-HHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHH-Hhh-cc---
Q 011529 343 WMPTYYNQVLHFNLTESGLFCVLPW-LTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLT-QLS-HV--- 416 (483)
Q Consensus 343 ~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~i~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~--- 416 (483)
+.|.|+++ +|+++.+.+.+....+ ++.+++.+++|++.||+|+|+.. .....+........ ... ..
T Consensus 231 ~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l-------~~~~~~~~~~~~~~~~~~~~~~~~ 302 (356)
T TIGR00901 231 LTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYAL-------LLFGIVQALTNAGFVWLASNGHHD 302 (356)
T ss_pred HHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHH-------HHHHHHHHHHHHHHHHHHhcCccc
Confidence 99999998 8999999998887766 57789999999999999987432 11111111111111 111 11
Q ss_pred ----chhHHHHHHHHHhhhhhhhhhchhhhhHhhhc-cCcceeeeeee
Q 011529 417 ----DSPAMAVLCMACSQGTDAFSQSGLYSNHQDIA-PRYSVSIISIN 459 (483)
Q Consensus 417 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~ 459 (483)
+..+....+..+.....+...+.......+.. ++++|+.+|+.
T Consensus 303 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~ 350 (356)
T TIGR00901 303 GITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALL 350 (356)
T ss_pred ccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHH
Confidence 23343444444445555566666777777765 56789888753
No 62
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.95 E-value=1.5e-25 Score=215.39 Aligned_cols=303 Identities=28% Similarity=0.453 Sum_probs=248.1
Q ss_pred HHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhh
Q 011529 108 LCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTP 187 (483)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~ 187 (483)
.+.+..+....+.....+..|.+.+++|.+..+.+++.+...++..++.++.|+++||+|||+.+..+.++..++.+...
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~ 82 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLA 82 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHH
Confidence 34556677778888888999999999999999999999999999999999999999999999999999999999999988
Q ss_pred hhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHHHH
Q 011529 188 VAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFG 267 (483)
Q Consensus 188 ~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~ 267 (483)
+.+ +++.+++.|++.|++.+...+...+++.|++|+|+|++.+++.+....+|..++|.+++.+.+..+|++.+++.+
T Consensus 83 ~~~--~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (352)
T cd06174 83 FAS--SLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILA 160 (352)
T ss_pred Hhc--cHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 887 899999999999999999999999999999999999999999999999999999999999999989999999988
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHH
Q 011529 268 SLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTY 347 (483)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (483)
++.++..+...+.. |.++...+..++..........+.|.+
T Consensus 161 ~~~~~~~~~~~~~~---------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (352)
T cd06174 161 ILGLLLALLLLFLL---------------------------------------RLLLLLALAFFLLSFGYYGLLTYLPLY 201 (352)
T ss_pred HHHHHHHHHHHHHH---------------------------------------HHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 88777666554432 446677788888888889999999999
Q ss_pred HHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHH
Q 011529 348 YNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMA 427 (483)
Q Consensus 348 ~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (483)
.++..|.+..+.+.......++.+++.++.+++.||+++|+. ....+..............++.+.......
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--------~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 273 (352)
T cd06174 202 LQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRL--------LLLIGLLLAALGLLLLALAPSLALLLVALL 273 (352)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH--------HHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 999779999999999999999999999999999999998841 111222222222222222333444444444
Q ss_pred HhhhhhhhhhchhhhhHhhhcc-Ccceeeeeee
Q 011529 428 CSQGTDAFSQSGLYSNHQDIAP-RYSVSIISIN 459 (483)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~ 459 (483)
+.........+.......+..| +++++.+|..
T Consensus 274 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (352)
T cd06174 274 LLGFGLGFAFPALLTLASELAPPEARGTASGLF 306 (352)
T ss_pred HHHHHHhccchhHHHHHHhhcCHHHHHHHHHHH
Confidence 4444455556667777777665 6788888743
No 63
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.95 E-value=4.7e-25 Score=215.13 Aligned_cols=258 Identities=16% Similarity=0.066 Sum_probs=184.1
Q ss_pred HHHHHHHhhhhhhhHHhhhh-hhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHH-HHHHHHHHHHHHHhh
Q 011529 110 FSAFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVL-GFGVVWWSIATALTP 187 (483)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~-~~~~~~~~~~~~~~~ 187 (483)
.+..++.........+.+|. +.+++|.++.++|++.+...+...+.+++.+.+.||+||||.+ ..+.++..++..+..
T Consensus 21 ~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~dr~g~r~~~~~~~~~~~~~~~~~~~ 100 (393)
T PRK15011 21 LIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGRSDKRGDRKSLIVFCCLLGVLACTLFA 100 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHH
Confidence 34456666666667777777 6788999999999998776554444444544449999999875 455566666677777
Q ss_pred hhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcch--hHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHH
Q 011529 188 VAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAER--SRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYS 265 (483)
Q Consensus 188 ~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r--~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~ 265 (483)
+++ +++.+++.+.+.|...+...+...+++.++.++++| +...++.+.+.++|.++||++++.+.+++|||..|++
T Consensus 101 ~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~ 178 (393)
T PRK15011 101 WNR--NYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLS 178 (393)
T ss_pred Hhh--HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHH
Confidence 777 788776665555544456778888888888766655 3456889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcC-hhHHHHHHHHHHHHHHHHHHHHhh
Q 011529 266 FGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSK-PPVWALIVSHFCHNWGTFILLTWM 344 (483)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 344 (483)
.++..++..+..+...|+.++++++.++ +.+ ...++ +..+......+........+..+.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (393)
T PRK15011 179 AAVAFIVCGVMVWLFLPSMRKELPLATG-TLE------------------APRRNRRDTLLLFVICTLMWGTNSLYIINM 239 (393)
T ss_pred HHHHHHHHHHHHHhhcCccCCCCccccc-ccc------------------ccccccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 9888777766666655554322211100 000 00112 223333334444445555666789
Q ss_pred HHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcC
Q 011529 345 PTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKG 388 (483)
Q Consensus 345 ~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~ 388 (483)
|.|+++.+|+++.+.+.+.+...++.+++.++.|++.||+++|+
T Consensus 240 p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~ 283 (393)
T PRK15011 240 PLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRF 283 (393)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHH
Confidence 99998889999999998888877888899999999999999884
No 64
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.95 E-value=2.7e-26 Score=223.65 Aligned_cols=281 Identities=20% Similarity=0.330 Sum_probs=238.1
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhHHh-hhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHH
Q 011529 102 RWFIVVLCFSAFLLCNMDRVNMSIA-ILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWS 180 (483)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 180 (483)
.+.++..++..++....+...++.. +..+.++.+....+.+.+.+++.++++++++++|.+.||++..+.+....++.+
T Consensus 43 dl~i~~~~~~~y~~~~~d~~si~~a~l~g~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~ 122 (495)
T KOG2533|consen 43 DLFILPFLCYLYFHAYLDKSSIVNASLSGLKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWG 122 (495)
T ss_pred HHHHHHHHHHHHHHHhcchhcchhHHHcCCccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHH
Confidence 3455556666677777776555433 444778999999999999999999999999999999999998888888888888
Q ss_pred HHHHHhhhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhh------
Q 011529 181 IATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLI------ 254 (483)
Q Consensus 181 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~------ 254 (483)
+..++....+ |++.+++.|++.|+..+..+|....++..|+.+++|+..+|++.+..++|.++|.+++..+.
T Consensus 123 ~~~~~~~~~~--s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~ 200 (495)
T KOG2533|consen 123 LFGFLTAAVH--SFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSG 200 (495)
T ss_pred HHHHHHHHHh--hhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCC
Confidence 8887777777 99999999999999999999999999999999999999999999999999999999998863
Q ss_pred hccCchHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCChhhHHH----hhhcc--cCCCCCcccchhhhhcChhHHHHHH
Q 011529 255 HRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKL----IVSSC--ASKEPVKTIPWGLILSKPPVWALIV 328 (483)
Q Consensus 255 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (483)
...||||.|++.+++.++..++.++..|+.|.+..-.+++++.. .++.. ...++.+...+++.+++|.+|...+
T Consensus 201 ~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~fl~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~a~~dp~vw~~~l 280 (495)
T KOG2533|consen 201 GLAGWRWLFIIEGVITLVLGIVVFFFLPDNPSKAWFLTDEEKELVVERLRESPSGGIENKFKWKGFKEALKDPGVWPFSL 280 (495)
T ss_pred CcCCceeehhHHHHHHHHHHheEEEEecCChhhccccchHHHHHHHHHHHhccCCCcccccCHHHHHHHHhchhHHHHHH
Confidence 34689999999999999999999999998887654433333221 11111 1112245567888999999999999
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHH
Q 011529 329 SHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTL 384 (483)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~ 384 (483)
..++.....+++.+|+|.|+++..|++..++..+.....++++++.+++|.++||.
T Consensus 281 ~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~ 336 (495)
T KOG2533|consen 281 CYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRL 336 (495)
T ss_pred HHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHH
Confidence 99999999999999999999996679999999999999999999999999999995
No 65
>PRK10054 putative transporter; Provisional
Probab=99.95 E-value=1.4e-25 Score=218.53 Aligned_cols=262 Identities=10% Similarity=0.077 Sum_probs=205.3
Q ss_pred HHHHHHHHHhhhhhhhHHhhhh-hhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHh
Q 011529 108 LCFSAFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALT 186 (483)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 186 (483)
.+....++.........+.+|. +.+++|++..++|++.+++.++..+++++.|+++||+|||+++.++.++.+++.++.
T Consensus 11 ~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~ 90 (395)
T PRK10054 11 ALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAI 90 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHH
Confidence 3445556666677777777665 667899999999999999999999999999999999999999999999999988888
Q ss_pred hhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHHH
Q 011529 187 PVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSF 266 (483)
Q Consensus 187 ~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~ 266 (483)
.+.+ +++.+++++.+.|.+.+...+...++..|.+|+++|++++++.+...++|..+||.+++.+.+ .+|+..|++.
T Consensus 91 ~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~ 167 (395)
T PRK10054 91 PLVN--NVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLA 167 (395)
T ss_pred HHHh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHH
Confidence 8888 888888889888888787788899999999999999999999999999999999999998875 7999999988
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHH
Q 011529 267 GSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPT 346 (483)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (483)
+++.++..+......++.++++++.+ ++ ..+.++.+|+|.++...+..++..+.......+.+.
T Consensus 168 ~~~~~i~~i~~~~~~~~~~~~~~~~~--~~--------------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 231 (395)
T PRK10054 168 AICSAFPLVFIQIWVQRSEKAIATET--GS--------------VWSPSVLLQDKALLWFTCSGFLASFVSGAFASCISQ 231 (395)
T ss_pred HHHHHHHHHHHHHHHhccccccccch--hh--------------hhhhhhhccCceehHHHHHHHHHHHHHHHhhhhHHH
Confidence 87777765554443333221111100 00 011246788999988888777777777666667777
Q ss_pred HHHHH--hCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcC
Q 011529 347 YYNQV--LHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKG 388 (483)
Q Consensus 347 ~~~~~--~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~ 388 (483)
|.... .+.+....+.+.....+..+......|++.||.++|+
T Consensus 232 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 275 (395)
T PRK10054 232 YVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRP 275 (395)
T ss_pred HHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchh
Confidence 77543 3455666677777777777777788899999988773
No 66
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.95 E-value=1.7e-25 Score=215.48 Aligned_cols=245 Identities=13% Similarity=0.152 Sum_probs=199.7
Q ss_pred hhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhcccHHHHHH
Q 011529 120 RVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLV 199 (483)
Q Consensus 120 ~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 199 (483)
...+++.+|.+.+++|.+..+.|++.+++.++..++.++.|+++||+|||+++.++.++..++.+.. ..+ +.+.+++
T Consensus 16 ~~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~--~~~~l~~ 92 (355)
T TIGR00896 16 LTSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAP--GTALLFA 92 (355)
T ss_pred cccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-Hhc--cHHHHHH
Confidence 3567888999999999999999999999999999999999999999999999999998888877776 566 8888999
Q ss_pred HHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhcc--CchHHHHHHHHHHHHHHHHH
Q 011529 200 VRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF--GWPSVFYSFGSLGTVWFTVW 277 (483)
Q Consensus 200 ~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~--g~~~~~~~~~~~~~~~~~~~ 277 (483)
.|++.|++.+...+....++.|+++ ++|++++++.+....+|..+++.+++.+.+.. +||+.|.+.+++.++.....
T Consensus 93 ~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~~~~ 171 (355)
T TIGR00896 93 GTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLALLAW 171 (355)
T ss_pred HHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 9999999999888888888999885 68999999999999999999999999888764 39988887766544432222
Q ss_pred HHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcc
Q 011529 278 LSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLT 357 (483)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 357 (483)
.++.++++++.++ ......++++|+|.+|...+..++....+.....++|.|+++ .|.+..
T Consensus 172 ---~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~~~ 232 (355)
T TIGR00896 172 ---IPQVRRRVAANQT---------------TTRLTPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILIS-HGASAA 232 (355)
T ss_pred ---hhhhccccCCCCC---------------CCCCCCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHH
Confidence 1221111110000 001234567889999887777777777888888999999987 799999
Q ss_pred hhhHHhHHHHHHHHHHHHHHHHHHHHHhhc
Q 011529 358 ESGLFCVLPWLTMAFSANLGGWIADTLVSK 387 (483)
Q Consensus 358 ~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~ 387 (483)
+.+.+.+...++.++++++.|++.||+++|
T Consensus 233 ~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~ 262 (355)
T TIGR00896 233 TAGSLLALMQLAQAASALLIPALARRVKDQ 262 (355)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHhhhccc
Confidence 999999999999999999999999999655
No 67
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.95 E-value=2e-25 Score=216.99 Aligned_cols=316 Identities=10% Similarity=0.079 Sum_probs=224.7
Q ss_pred HHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCc----hHHHHHHHHHHHHHHHhhh
Q 011529 113 FLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGK----AVLGFGVVWWSIATALTPV 188 (483)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r----~~~~~~~~~~~~~~~~~~~ 188 (483)
++......+.+.+.+|.+.+++|.|..++|++.+++.++..++++++|+++||+||| +.+.+...+. .......
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~~~ 90 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFWFG 90 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHHHh
Confidence 444455667788899999999999999999999999999999999999999999984 3332222221 1222233
Q ss_pred hhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHHHHH
Q 011529 189 AAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGS 268 (483)
Q Consensus 189 ~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~ 268 (483)
.+ ++|.+++.|++.|++.+...+...+++.++ +++|+++++......++|..+||.+++++.+++|||..|++.++
T Consensus 91 ~~--~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~ 166 (382)
T PRK11128 91 AH--SFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTA 166 (382)
T ss_pred cc--cHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHH
Confidence 45 899999999999999888889888888876 46688889999999999999999999999999999999988776
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHHH
Q 011529 269 LGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYY 348 (483)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (483)
..++..+.. ...++++++.++ +++ .++...++++++|+|.+|...+..++..........+.|.|+
T Consensus 167 ~~~~~~~~~-~~~~~~~~~~~~----~~~---------~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 232 (382)
T PRK11128 167 GVASMLLGQ-LLRPTIMPQGES----RQQ---------ESAGWPAWKALLKEPTVWRFLLCVSLLQGSHAAYYGFSAIYW 232 (382)
T ss_pred HHHHHHHHH-HccCCCCCcccc----ccc---------cccccchHHHHHcChhHHHHHHHHHHHHHHhHhHHHHHHHHH
Confidence 555443333 223322111110 000 001123577899999999888888888778778888899999
Q ss_pred HHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHH
Q 011529 349 NQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMAC 428 (483)
Q Consensus 349 ~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (483)
++ .|.+..+.|.+.++..++.++..++.+++.||+++|+. +..+.+...+.+......++.+..++...+
T Consensus 233 ~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~---------l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 302 (382)
T PRK11128 233 QA-AGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDL---------LLLSAICGVVRWGLMGSTTALPWLIVIQIL 302 (382)
T ss_pred HH-CCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH---------HHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 77 89999999999998888999999999999999998742 222223333333333334444544444444
Q ss_pred hhhhhhhhhchhhhhHhhhccCcceeeeee
Q 011529 429 SQGTDAFSQSGLYSNHQDIAPRYSVSIISI 458 (483)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 458 (483)
.+...+...+....+..+.+++++++..+.
T Consensus 303 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (382)
T PRK11128 303 HCGTFTVCHLAAMRYIAARPGSEVIRLQAL 332 (382)
T ss_pred HHHHHHHHHHHHHHHHHHCCHhhhHHHHHH
Confidence 343344445555666666666666666663
No 68
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.95 E-value=1.9e-24 Score=197.52 Aligned_cols=339 Identities=15% Similarity=0.158 Sum_probs=259.6
Q ss_pred HHHHHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHH
Q 011529 105 IVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATA 184 (483)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 184 (483)
.+..+...+++.++......+.+|.+.+.++++..|.+++..++..++.+..++.|++.+|+|+|+-+++++.++++++.
T Consensus 14 ~~v~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~ 93 (422)
T COG0738 14 AFVLLTSLFFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAA 93 (422)
T ss_pred HHHHHHHHHHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 45556666777788888889999999999999999999999999999999999999999999999999999999999998
Q ss_pred Hhhhh-hcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhc-------
Q 011529 185 LTPVA-AKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR------- 256 (483)
Q Consensus 185 ~~~~~-~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~------- 256 (483)
++.-+ ...++..++++.++.|.|.+...+..+.++..+.++++..+.+++.+..+++|.+++|++++.++.+
T Consensus 94 lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~ 173 (422)
T COG0738 94 LFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMS 173 (422)
T ss_pred HHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccC
Confidence 88522 2227888999999999999999999999999999998999999999999999999999999988772
Q ss_pred ------------cCchHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChhHH
Q 011529 257 ------------FGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVW 324 (483)
Q Consensus 257 ------------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (483)
-.|+++|...+...++..+.....+.+..++..+...+.+ +....+++++|.++
T Consensus 174 ~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~~~~~~~~~--------------~~~~~~l~~~~~~~ 239 (422)
T COG0738 174 AAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVAAPSLGASG--------------SAGLSSLFQNKHLR 239 (422)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCcccccccccc--------------cchHHHHHhChHHH
Confidence 1377788877777666655554433222111111100000 11355789999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHH
Q 011529 325 ALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFL 404 (483)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~ 404 (483)
...+..+++-..+..+..|++.|+.+..|.+..+.+...+.++++.++|++++.++..|+...|. +...+ +
T Consensus 240 ~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~--------Laf~a-~ 310 (422)
T COG0738 240 LGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKY--------LAFYA-L 310 (422)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHH--------HHHHH-H
Confidence 99999999999999999999999999889999999999999999999999999999999987642 22121 1
Q ss_pred HHHHHHHHhhccchhHHHHHHHHHhhhhhhhhhchhhhhHhhhccCcceeeeeeeecCCCCce
Q 011529 405 GPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSVSIISINILRAPGSH 467 (483)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~g~~ 467 (483)
.....+......+..+.+..+. +.+.+.+...|...+...+.-+++...+.+...+...|+.
T Consensus 311 ~~ill~~~~~l~~g~v~~~~l~-~ig~F~simfPTIfslal~~l~~~ts~~s~~l~maivGGA 372 (422)
T COG0738 311 IAILLLLAVALIGGVVALYALF-LIGLFNSIMFPTIFSLALKNLGEHTSVGSGLLVMAIVGGA 372 (422)
T ss_pred HHHHHHHHHHHhcChHHHHHHH-HHHHHhHHHHHHHHHHHHhccCccccccceeeeeheecch
Confidence 2222222222333334333333 4444455667777877777777777777765554444443
No 69
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.95 E-value=4.4e-25 Score=215.71 Aligned_cols=323 Identities=17% Similarity=0.161 Sum_probs=223.7
Q ss_pred HHHhhhhhhhHHhhhhhhhhcC--CChhhHHHHHHH-----HHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHh
Q 011529 114 LLCNMDRVNMSIAILPMSAEFN--WNPATVGLIQSS-----FFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALT 186 (483)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~g--~s~~~~g~~~~~-----~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 186 (483)
+.++++...++...+.+.+++. .++.+.+.+.+. ..++..+++++.|+++||+|||+++..+.++..++.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~ 82 (394)
T TIGR00883 3 AVEWFDFYLYGFAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLI 82 (394)
T ss_pred chhHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 3566777778877777776654 445556554443 333445688999999999999999999999999999998
Q ss_pred hhhhcccHH--------HHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhh----
Q 011529 187 PVAAKLGLP--------FLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLI---- 254 (483)
Q Consensus 187 ~~~~~~~~~--------~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~---- 254 (483)
.+.+ +++ .+++.|+++|++.+...+...+++.|++++++|++..++.+.+..+|.++++.++..+.
T Consensus 83 ~~~~--~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~ 160 (394)
T TIGR00883 83 GLLP--SYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLG 160 (394)
T ss_pred hhCC--ChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 8887 553 57888999999999999999999999999999999999999999999999998877653
Q ss_pred ----hccCchHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChh--HHHHHH
Q 011529 255 ----HRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPP--VWALIV 328 (483)
Q Consensus 255 ----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 328 (483)
+.++||+.|++.+++.++...... ..+++++..+ +++ +++....++++.+++++ ++...+
T Consensus 161 ~~~~~~~~w~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-----~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (394)
T TIGR00883 161 DDALLEWGWRIPFLVSAVLVLIGLYLRR-NLEETPVFEK-----AQE--------KHKKKRGPIRETLTKHRKPFLLGLG 226 (394)
T ss_pred HHHhhccchHHHHHHHHHHHHHHHHHHH-hcCCChhHHH-----HHh--------ccccccCCHHHHHHhchHHHHHHHH
Confidence 357899999887766555433322 2222211100 000 00111234556666655 777777
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHH-
Q 011529 329 SHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPA- 407 (483)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~- 407 (483)
..++..........+.|.|+++.+|.+..+.+.......++.+++.++.|++.||+++|+.... .........
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~------~~~~~~~~~~ 300 (394)
T TIGR00883 227 LVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLII------FTVLAALLAV 300 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHH------HHHHHHHHHH
Confidence 7777777778888999999988789999999999999999999999999999999998842111 111111111
Q ss_pred HHHHHhhccchhHHHHHHHHHhhhhhhhhhchhhhhHhhhcc-Ccceeeeee
Q 011529 408 FFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAP-RYSVSIISI 458 (483)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~ 458 (483)
.........+..+.......+.+.......+.......+..| +.++++.+.
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 352 (394)
T TIGR00883 301 PLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASL 352 (394)
T ss_pred HHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeee
Confidence 111111122233333333333333333445556677777665 568888875
No 70
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.95 E-value=2.8e-26 Score=233.93 Aligned_cols=282 Identities=16% Similarity=0.224 Sum_probs=224.6
Q ss_pred HHHHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHH
Q 011529 106 VVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATAL 185 (483)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 185 (483)
+..+.+..+......+..+..++.+.++|+++..+.|++.+.+.+++.++.++.|++.||+|||+++.++.++++++.++
T Consensus 35 ~~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll 114 (633)
T TIGR00805 35 SLLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFL 114 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHH
Confidence 34445567777777888889999999999999999999999999999999999999999999999999999999999998
Q ss_pred hhhhh-------------------------------------------------cccHHHHHHHHHHHhhhhhcchhHHH
Q 011529 186 TPVAA-------------------------------------------------KLGLPFLLVVRVFMGIGEGVAMPAMN 216 (483)
Q Consensus 186 ~~~~~-------------------------------------------------~~~~~~l~~~~~l~G~~~~~~~~~~~ 216 (483)
+++.+ ...+..++++|+++|+|.+..++...
T Consensus 115 ~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~ 194 (633)
T TIGR00805 115 LSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGI 194 (633)
T ss_pred HhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCc
Confidence 87653 00245678899999999999999999
Q ss_pred HHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhcc----------------------CchHHHHHHHHHHHHHH
Q 011529 217 NILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF----------------------GWPSVFYSFGSLGTVWF 274 (483)
Q Consensus 217 ~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~----------------------g~~~~~~~~~~~~~~~~ 274 (483)
+++.|++|+++|++++++.+.+..+|..+|+++++++.+.+ +|+..|++.+++.++..
T Consensus 195 ~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~ 274 (633)
T TIGR00805 195 SYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTS 274 (633)
T ss_pred hhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999987643 16667888887777766
Q ss_pred HHHHHhccCCCCCCCCCC--hhhHHHhhhcccCC-C------CCcccchhhhhcChhHHHHHHHHHHHHHHHHHHHHhhH
Q 011529 275 TVWLSKAHSSPAEDPQLR--PAEKKLIVSSCASK-E------PVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMP 345 (483)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (483)
+.++.++++.|+...+.+ ..+++......... . +.....++.+++||.++...+..++.....+++.+|+|
T Consensus 275 v~l~~~p~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP 354 (633)
T TIGR00805 275 IPFFFFPKALPKEGKRVNVDVHETEKLEKSEDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYITFLP 354 (633)
T ss_pred HHHHhCccccCCcccccchhhhhhhcccccccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 655555544433211111 00000000000000 0 00113466789999999999999999999999999999
Q ss_pred HHHHHHhCCCcchhhHHhHHHHH-HHHHHHHHHHHHHHHHhhc
Q 011529 346 TYYNQVLHFNLTESGLFCVLPWL-TMAFSANLGGWIADTLVSK 387 (483)
Q Consensus 346 ~~~~~~~g~~~~~~~~~~~~~~~-~~~i~~~~~g~l~dr~g~~ 387 (483)
.|+++++|+++.+++++.....+ +.+++.+++|+++||++.+
T Consensus 355 ~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~ 397 (633)
T TIGR00805 355 KYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLN 397 (633)
T ss_pred HHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeeccc
Confidence 99999999999999999887776 6789999999999999855
No 71
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.95 E-value=6.3e-26 Score=224.57 Aligned_cols=340 Identities=19% Similarity=0.176 Sum_probs=256.5
Q ss_pred HHHHHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHH
Q 011529 105 IVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATA 184 (483)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 184 (483)
.+..++.+.++..++..+....++.+..+..-|+..++++..+..+...+.++++|.++||++||++++.+.++.++..+
T Consensus 11 ~Fr~lw~a~~iS~lG~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~ 90 (524)
T PF05977_consen 11 NFRRLWIAQLISNLGDWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVAL 90 (524)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHH
Confidence 34455677777788888888888887778888999999999999999999999999999999999999999888776554
Q ss_pred Hhhh---hhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchH
Q 011529 185 LTPV---AAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPS 261 (483)
Q Consensus 185 ~~~~---~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~ 261 (483)
.+.+ ....+.|.+++..++.|++.+...|+.++++.+..|+++...++++.+...++..++||.++|.++..+|-.+
T Consensus 91 ~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~ 170 (524)
T PF05977_consen 91 LLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAA 170 (524)
T ss_pred HHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHH
Confidence 4433 2233788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChhHHHHHHHHHHHHHHHHHHH
Q 011529 262 VFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILL 341 (483)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (483)
.|.+.++..++..+.....+++.+++ +..++.-.+. -+..++.+.++|.+...++..++..+....+.
T Consensus 171 ~f~inalsfl~~i~~l~~~~~~~~~~-~~~~e~~~~~-----------l~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~ 238 (524)
T PF05977_consen 171 AFLINALSFLISILALLRWKPPPPPS-SLPRERFFSA-----------LREGLRYVRSSPPLRSVLLRSFLFNLFASAVW 238 (524)
T ss_pred HHHHHHHHHHHHHHHHHHcccccccc-ccchhhhhhh-----------HHHHHHHHhcchHHHHHHHHHHHHHHhhhHHH
Confidence 99988877766555544443332211 1111111111 12346667778888777776667776667777
Q ss_pred HhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhccchhHH
Q 011529 342 TWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAM 421 (483)
Q Consensus 342 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (483)
..+|.+.++.+|.++...|++.+..++++++|.++.+++.+|++++++ +..+.++.+..+..+...++.+.
T Consensus 239 aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~l---------v~~~~~~~a~~~~~lal~~~~~~ 309 (524)
T PF05977_consen 239 ALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRL---------VLLASLLFALALLLLALSPSFWL 309 (524)
T ss_pred HhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchh---------hHHHHHHHHHHHHHHhcchHHHH
Confidence 889999999999999999999999999999999999999888876632 22333334444444455556666
Q ss_pred HHHHHHHhhhhhhhhhchhhhhHhhhcc-CcceeeeeeeecCCCC
Q 011529 422 AVLCMACSQGTDAFSQSGLYSNHQDIAP-RYSVSIISINILRAPG 465 (483)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~g 465 (483)
.++.+++.+...........+..+...| +.+|+++++......|
T Consensus 310 ~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g 354 (524)
T PF05977_consen 310 ALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFG 354 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHH
Confidence 5555555555555555556666666555 4599999865443333
No 72
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.94 E-value=1.1e-24 Score=219.18 Aligned_cols=289 Identities=13% Similarity=0.104 Sum_probs=205.6
Q ss_pred CChhHHHHHHHHHHHHHHhhhhhhhHHhhhhhhhhc-----CCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHH
Q 011529 99 FPKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEF-----NWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLG 173 (483)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~ 173 (483)
.+.++..+.++.++.+..+++...++...|.+.+++ +.+..+.+++.+...++..++.+++|+++||+|||+++.
T Consensus 11 ~~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~ 90 (502)
T TIGR00887 11 GWQHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYG 90 (502)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHH
Confidence 345667778888899999999999999888876642 355667899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhcc----cHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhh
Q 011529 174 FGVVWWSIATALTPVAAKL----GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAF 249 (483)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~----~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~ 249 (483)
++.++..++.++.+++++. +++.++++|++.|++.+...+....++.|++|+++|+++.++.+....+|.++++.+
T Consensus 91 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~ 170 (502)
T TIGR00887 91 MELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIV 170 (502)
T ss_pred HHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998888776510 167899999999999999999999999999999999999999999999999999988
Q ss_pred HHHhhh-----------------------ccCchHHHHHHHHHHHHHHHHHHHhccCCCCC---CCCCChhhHHHhh---
Q 011529 250 SPFLIH-----------------------RFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAE---DPQLRPAEKKLIV--- 300 (483)
Q Consensus 250 ~~~l~~-----------------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~--- 300 (483)
+..+.. .++||+.+.+.++..++..+. .+..||+|+- +.+.+++..+...
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~-~~~lpESpr~l~~~~~~~~~a~~~~~~~~ 249 (502)
T TIGR00887 171 ALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYF-RLTIPETPRYTADVAKDVEQAASDMSAVL 249 (502)
T ss_pred HHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHH-HHhCCCCHHHHHHhCcchHHHHHHHHHHh
Confidence 876532 247999998777666554443 4455666541 1111111110000
Q ss_pred h-----cccC------CCCCcccchhhhhcC---hhHHH----HHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcchhhH-
Q 011529 301 S-----SCAS------KEPVKTIPWGLILSK---PPVWA----LIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGL- 361 (483)
Q Consensus 301 ~-----~~~~------~~~~~~~~~~~~~~~---~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~- 361 (483)
+ ..++ +++..+.++++++++ ++.+. .....++....+++...+.|.++++ .|++....+.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~-~G~~~~~~~~~ 328 (502)
T TIGR00887 250 QVKIEAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSA-IGYSPPAATNN 328 (502)
T ss_pred ccccccCcccccchhccccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHH-HcCCCCccchh
Confidence 0 0000 000111346666653 22211 1223333444556677788999976 7887543221
Q ss_pred -----------HhHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 011529 362 -----------FCVLPWLTMAFSANLGGWIADTLVSKGL 389 (483)
Q Consensus 362 -----------~~~~~~~~~~i~~~~~g~l~dr~g~~~~ 389 (483)
...+..++.+++.++.+++.||+|||+.
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~ 367 (502)
T TIGR00887 329 AYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPI 367 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhH
Confidence 1233445667788999999999999854
No 73
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.94 E-value=7.4e-24 Score=211.61 Aligned_cols=266 Identities=15% Similarity=0.162 Sum_probs=205.9
Q ss_pred HHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhc-----CCchH-HHHHHHHHHH
Q 011529 108 LCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTV-----GGKAV-LGFGVVWWSI 181 (483)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-----g~r~~-~~~~~~~~~~ 181 (483)
.+++..+.++.........+|.+.++.|.+..++|.+ +...... ++.+++|+++||+ |||+. +..+.++.++
T Consensus 16 ~~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~ 93 (491)
T PRK11010 16 ILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLV 93 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHH
Confidence 3445555667777788888999999999999999997 3333343 5899999999999 99885 6677777777
Q ss_pred HHHHhhhhh-cccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhh-ccCc
Q 011529 182 ATALTPVAA-KLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH-RFGW 259 (483)
Q Consensus 182 ~~~~~~~~~-~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-~~g~ 259 (483)
+...+++.+ ..+++.+.+.+++.+++.+...+...+++.|++|+++|+++.++...+..+|.++++.+++++.+ ..||
T Consensus 94 ~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GW 173 (491)
T PRK11010 94 AIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGW 173 (491)
T ss_pred HHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCH
Confidence 776665542 22688889999999999999999999999999999999999999999999999999999999998 5799
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChhHHHHHHHHHHHHHHHHH
Q 011529 260 PSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFI 339 (483)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (483)
|..|++.+++.++..+..+. .+++++..++ ++..++ ....+++++++++..|...+..++.......
T Consensus 174 r~~f~i~a~l~ll~~l~~~~-~~e~~~~~~~-~~~~~~-----------~~~~~l~~~~~~~~~~~~ll~~~l~~~~~~~ 240 (491)
T PRK11010 174 QGMYWLMAALLIPCIIATLL-APEPTDTIPV-PKTLEQ-----------AVVAPLRDFFGRNNAWLILLLIVLYKLGDAF 240 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHh-cCCCcccccc-ccchhh-----------hHHHHHHHHHcCcCHHHHHHHHHHHHHHHHH
Confidence 99999998877766555444 3443221111 000000 0012466778888887777666777677777
Q ss_pred HHHhhHHHHHHHhCCCcchhhHHhH-HHHHHHHHHHHHHHHHHHHHhhcC
Q 011529 340 LLTWMPTYYNQVLHFNLTESGLFCV-LPWLTMAFSANLGGWIADTLVSKG 388 (483)
Q Consensus 340 ~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~i~~~~~g~l~dr~g~~~ 388 (483)
...+.++|+.+..|++..+.+.+.. ...++.+++.+++|++.||+++|+
T Consensus 241 ~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~ 290 (491)
T PRK11010 241 AMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFR 290 (491)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 7788888987778999999999875 556799999999999999999874
No 74
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.94 E-value=2.1e-23 Score=204.31 Aligned_cols=265 Identities=14% Similarity=0.050 Sum_probs=205.3
Q ss_pred HHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhc-----CCch-HHHHHHHHHHHH
Q 011529 109 CFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTV-----GGKA-VLGFGVVWWSIA 182 (483)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-----g~r~-~~~~~~~~~~~~ 182 (483)
++..++.++.........+|.+.++.|+|.+++|++..+... .+..+++|+++||+ |||| ++.++.++.+++
T Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~ 81 (402)
T PRK11902 4 MLLLGFASGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAAS 81 (402)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHH
Confidence 345677788888888899999999999999999999777665 58899999999999 7775 688888888777
Q ss_pred HHHhhhhhc-ccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhc-cCch
Q 011529 183 TALTPVAAK-LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR-FGWP 260 (483)
Q Consensus 183 ~~~~~~~~~-~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-~g~~ 260 (483)
...+.+.+. .+++.+++..++.+++.+...++..+++.|++|+++|+++.++...+..+|.++++.+++.+.+. .|||
T Consensus 82 ~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~ 161 (402)
T PRK11902 82 IAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWG 161 (402)
T ss_pred HHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHH
Confidence 777666531 25777888888888888888999999999999999999999999999999999999999999885 5999
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChhHHHHHHHHHHHHHHHHHH
Q 011529 261 SVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFIL 340 (483)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (483)
..|++.+++.++..+.. ...++++.++++.+ +.++. ...++++++|||.++...+..++........
T Consensus 162 ~~f~i~a~~~l~~~l~~-~~~~e~~~~~~~~~-~~~~~-----------~~~~~~~l~~~~~~~~~l~~~~l~~~~~~~~ 228 (402)
T PRK11902 162 NTYLLMAGLMLAGALTT-LWAPEPEVPARPPR-SLGEA-----------VVGPLRDFFSRRGAWALLLLIVLYKLGDAFA 228 (402)
T ss_pred HHHHHHHHHHHHHHHHH-HhcCCCcccccccc-hhHHH-----------HHHHHHHHHhCcCHHHHHHHHHHHHhHHHHH
Confidence 99999888776655443 33343322211111 00000 1224677899999988777777766655544
Q ss_pred HHhhHHHHHHHhCCCcchhhHHhHHHH-HHHHHHHHHHHHHHHHHhhcC
Q 011529 341 LTWMPTYYNQVLHFNLTESGLFCVLPW-LTMAFSANLGGWIADTLVSKG 388 (483)
Q Consensus 341 ~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~i~~~~~g~l~dr~g~~~ 388 (483)
..+.+.++.+..|+++.+.+++....+ ++.+++.++++++.||+++|+
T Consensus 229 ~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~ 277 (402)
T PRK11902 229 GSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYR 277 (402)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 455666777778999999999886654 468899999999999999874
No 75
>TIGR00898 2A0119 cation transport protein.
Probab=99.94 E-value=1.2e-24 Score=219.77 Aligned_cols=318 Identities=18% Similarity=0.122 Sum_probs=216.8
Q ss_pred HhhhhhhhhcCCC---hhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhcccHHHHHHHH
Q 011529 125 IAILPMSAEFNWN---PATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVR 201 (483)
Q Consensus 125 ~~~~~~~~~~g~s---~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 201 (483)
+..+.+.++++++ ..+.+++.+++.++..++.++.|+++||+|||++++++.++.+++.++.++++ +++.+++.|
T Consensus 110 ~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~r 187 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSP--NYTVFLVFR 187 (505)
T ss_pred cccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcc--cHHHHHHHH
Confidence 5677899999999 99999999999999999999999999999999999999999999999999998 999999999
Q ss_pred HHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHHHHHHhc
Q 011529 202 VFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKA 281 (483)
Q Consensus 202 ~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 281 (483)
++.|++.+...+...+++.|++|+++|+++.++...+..+|.++++.+++.+.+ ||+.+++.++..++..+.. +..
T Consensus 188 ~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~~~~~~~~-~~~ 263 (505)
T TIGR00898 188 LLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPTFLFFLLS-WFV 263 (505)
T ss_pred HHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHH-Hhc
Confidence 999999999999999999999999999999999999999999999998876653 9999999888877766655 444
Q ss_pred cCCCCCC-CCCChhhH-HHh----------------hh--cccCCCCCcccchhhhhcChhHHHHHHHHHHHHHHHHHHH
Q 011529 282 HSSPAED-PQLRPAEK-KLI----------------VS--SCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILL 341 (483)
Q Consensus 282 ~~~~~~~-~~~~~~~~-~~~----------------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (483)
+++++.. .+.+.++. +.. .. ..+..++.++..+++++++|.++...+...+..+......
T Consensus 264 ~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 343 (505)
T TIGR00898 264 PESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSY 343 (505)
T ss_pred CCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHHHH
Confidence 5544310 00010000 000 00 0000011123467888999998877666555544443333
Q ss_pred HhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhccchhHH
Q 011529 342 TWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAM 421 (483)
Q Consensus 342 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (483)
..++.+..+ .+.+. .......++..+++.++.+++.||+|||+.. .....+................+.
T Consensus 344 ~~~~~~~~~-~~~~~---~~~~~~~~~~~i~~~~~~~~l~dr~grr~~~-------~~~~~~~~~~~l~~~~~~~~~~~~ 412 (505)
T TIGR00898 344 YGLVLDLGN-LGGNI---YLDLFISGLVELPAKLITLLLIDRLGRRYTM-------AASLLLAGVALLLLLFVPVDLYFL 412 (505)
T ss_pred HHHhccccc-cCCCh---HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHH-------HHHHHHHHHHHHHHHHcCCCchHH
Confidence 333433333 45443 2334455677888999999999999988421 111111111111111112222233
Q ss_pred HHHHHHHhhhhhhhhhchhhhhHhhhcc-Ccceeeeeee
Q 011529 422 AVLCMACSQGTDAFSQSGLYSNHQDIAP-RYSVSIISIN 459 (483)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~ 459 (483)
.+....++.+......+....+..|..| +.|++++|+.
T Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~ 451 (505)
T TIGR00898 413 RTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVC 451 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHH
Confidence 3333333434344444556667777766 4577777743
No 76
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.93 E-value=3.5e-23 Score=196.04 Aligned_cols=335 Identities=13% Similarity=0.084 Sum_probs=241.6
Q ss_pred hhhhhhHHhhhhhhhhcCCChhh-HHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhcccHHH
Q 011529 118 MDRVNMSIAILPMSAEFNWNPAT-VGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPF 196 (483)
Q Consensus 118 ~~~~~~~~~~~~~~~~~g~s~~~-~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (483)
-.+...+...|.+.+++|++..+ .|.+.+++..++.++.++.|+++||+|.|+++.++.+..++..++.++++ +++.
T Consensus 40 e~R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~--Sl~~ 117 (511)
T TIGR00806 40 QFRPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGT--SVWH 117 (511)
T ss_pred HhhchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHH--HHHH
Confidence 34677888899999999999999 99999999999999999999999999999999999999999999999998 8999
Q ss_pred HHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHHH--HHHHHHHH
Q 011529 197 LLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSF--GSLGTVWF 274 (483)
Q Consensus 197 l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~--~~~~~~~~ 274 (483)
+.+.|++.|++.|... +...++..++|+++|+++.|+...+..+|.+++++++++ +..+||++-+.+. .+...+..
T Consensus 118 L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln~Isl~s~~~a 195 (511)
T TIGR00806 118 MQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYSTLNIISLVFMTFS 195 (511)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHHHHHHHHHHHHHH
Confidence 9999999999999999 999999999999999999999999999999999999999 5568998654432 22222222
Q ss_pred HHHHHhccCCCCC---CCCC--C---hhhHHHhhhccc--CCC-C---------CcccchhhhhcChhHHHHHHHHHHHH
Q 011529 275 TVWLSKAHSSPAE---DPQL--R---PAEKKLIVSSCA--SKE-P---------VKTIPWGLILSKPPVWALIVSHFCHN 334 (483)
Q Consensus 275 ~~~~~~~~~~~~~---~~~~--~---~~~~~~~~~~~~--~~~-~---------~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (483)
+++.++.|..++. +++. + ..+.+....... ..+ + .-..+++...+||.+....+-+.+..
T Consensus 196 ~~~a~~LP~~~~sl~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~n~~vl~WSlWwa~a~ 275 (511)
T TIGR00806 196 VFLALFLKRPKRSLFFNRLEDVRGALPCELDQMVPGPGGKLEDYLGTCRDSFLVRMLSELVTIYRNPQLLLWSLWWVFNS 275 (511)
T ss_pred HHHHHhCCCCchhhhhccccccccccccccccCCCCCccccchhhhhhhhHHHHHHHHHHHHHhcCcchhhhhHHHHHHh
Confidence 3333333332221 0000 0 000000000000 000 0 01123455678898888888888888
Q ss_pred HHHHHHHHhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhh
Q 011529 335 WGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLS 414 (483)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (483)
.+++.+.+|.....++.-+-.+...|.+-++..+.+++..+..|++-.++.+. ....+.+..++.+..++...
T Consensus 276 ~g~~qv~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w~~~-------~~l~l~v~s~~~~gll~~m~ 348 (511)
T TIGR00806 276 AGYYLITYYVHTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIRWARW-------SKLLIAVVSAIQAGLVFWMS 348 (511)
T ss_pred hHHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCCchhh-------HHHHHHHHHHHHHHHhhhhh
Confidence 88888888888888775342233667788888888888888888885444322 12344444444555566666
Q ss_pred ccchhHHHHHHHHHhhhhhhhhhchhhhhHhh-hccCcceeeeeeeecCC
Q 011529 415 HVDSPAMAVLCMACSQGTDAFSQSGLYSNHQD-IAPRYSVSIISINILRA 463 (483)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~g~~~~~~ 463 (483)
..++.++..+..++......+..+.....+.. +..+..|..+|+|...+
T Consensus 349 ~t~~Iw~~Y~~yvlf~~~y~flitia~~~iA~~L~~~~~aLvFGiNtfvA 398 (511)
T TIGR00806 349 QSHDIWVLYVTYVLFRGIYQFLVPIATFQIASSLSKELCALVFGINTFVA 398 (511)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccceEEEEecHHHHH
Confidence 77777877777777777776766665555554 44556799999886633
No 77
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.93 E-value=8.6e-24 Score=208.37 Aligned_cols=349 Identities=15% Similarity=0.147 Sum_probs=269.3
Q ss_pred cCChhHHHHHHHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHH
Q 011529 98 EFPKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVV 177 (483)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 177 (483)
...+.|.+....++..+........++.+.+.+.++++.+..+++|+.++......+..|+.+.+.||+|.|.+.++|.+
T Consensus 40 dGG~gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~ 119 (509)
T KOG2504|consen 40 DGGWGWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGL 119 (509)
T ss_pred CCCeeeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHH
Confidence 55677888888888888887778888888999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhcccHHHHHHH-HHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhc
Q 011529 178 WWSIATALTPVAAKLGLPFLLVV-RVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR 256 (483)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~l~~~-~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 256 (483)
+..++.++..+++ ++|.+++. -++.|+|.+..+......+..+| +++|+.++|+...+.++|.++-|.+...+.+.
T Consensus 120 v~~~g~~lssF~~--~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF-~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~ 196 (509)
T KOG2504|consen 120 VAALGLLLSSFAT--SLWQLYLTFGVIGGLGLGLIYLPAVVILGTYF-EKKRALATGIAVSGTGVGTVVFPPLLKYLLSK 196 (509)
T ss_pred HHHHHHHHHHHHh--hHHHHHHHHHHHhhccchhhhcchhhhhhhHh-HHHHHHHHhhhhccCCcceeeHHHHHHHHHHH
Confidence 9999999999999 88877666 68899999999999999999888 79999999999999999999999999999999
Q ss_pred cCchHHHHHHHHHHHHHHHHHHHhccCCCCCCCC----------------------------CChh----hHHHhhhccc
Q 011529 257 FGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQ----------------------------LRPA----EKKLIVSSCA 304 (483)
Q Consensus 257 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~----~~~~~~~~~~ 304 (483)
+|||+.+++.+.+.+-..+.....+|..+...+. .... ......+...
T Consensus 197 ~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (509)
T KOG2504|consen 197 YGWRGALLIFGGISLNVLVAGALLRPLSPPKKPNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPD 276 (509)
T ss_pred hCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCchhhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCc
Confidence 9999999999988877777766666632221100 0000 0000000000
Q ss_pred CCC--CCcccch---hhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHH
Q 011529 305 SKE--PVKTIPW---GLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGW 379 (483)
Q Consensus 305 ~~~--~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~ 379 (483)
+.. ..+.... .++++++.++.+.+...+...++.....++|.|.++ .|++..+++.+.++.++..++++++.|+
T Consensus 277 ~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~-~g~~~~~aa~l~Siigi~~i~gRi~~G~ 355 (509)
T KOG2504|consen 277 KWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAKS-LGLSSNDAAFLLSIIGVSDIIGRIILGL 355 (509)
T ss_pred cccccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCChhhhHHHHHHHHHhhhhhhhhhhh
Confidence 000 1111112 478899999999999999999999999999999996 8999999999999999999999999999
Q ss_pred HHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHhhhhhhhhhchhhhhHhhhc-cCcceeeee
Q 011529 380 IADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIA-PRYSVSIIS 457 (483)
Q Consensus 380 l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g 457 (483)
+.|+...+ ...+..++++..++........+..+.++....+.+...+...........+.. .++-..+.|
T Consensus 356 laD~~~~~-------~~~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~G 427 (509)
T KOG2504|consen 356 LADKPGIR-------ALVLFLLTLLIAGLARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYG 427 (509)
T ss_pred hcCccccc-------hHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHH
Confidence 99998855 334555555555555555555555555554444444444444443333444443 344555555
No 78
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.93 E-value=1e-23 Score=232.76 Aligned_cols=270 Identities=15% Similarity=0.130 Sum_probs=197.9
Q ss_pred HHHHHHHHHhhhhhhhHHhhh-hhhhhcCCCh-hhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHH---HHHHHHH
Q 011529 108 LCFSAFLLCNMDRVNMSIAIL-PMSAEFNWNP-ATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFG---VVWWSIA 182 (483)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~s~-~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~---~~~~~~~ 182 (483)
..++..+..++....+..... .+..+.+.+. ...++..+++.+++.++++++|+++||+|||+++... .++.++.
T Consensus 19 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~ 98 (1140)
T PRK06814 19 TQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAAL 98 (1140)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHH
Confidence 334444444444433333333 3444444433 4578889999999999999999999999999976432 2222222
Q ss_pred HHHhhhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHH
Q 011529 183 TALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSV 262 (483)
Q Consensus 183 ~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~ 262 (483)
.+.....+ +++.++++|+++|++.+...|+..+++.+++++++|++++|+.+++..+|.++||+++|++.+..+|++.
T Consensus 99 ~~~~~~~~--s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~ 176 (1140)
T PRK06814 99 AIYGFHLN--SVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVIL 176 (1140)
T ss_pred HHHHHHHh--hHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHH
Confidence 22223335 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChhHHHHHHHHHHHHHHHHHHHH
Q 011529 263 FYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLT 342 (483)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (483)
|+..+++.++..++.+. .++.+......+.... ... .....++.+.++|.+|...+..++..+....+.+
T Consensus 177 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (1140)
T PRK06814 177 VALLMGIAVLGWLASLF-IPKTGNAAPDLKIDRN-IIR--------STITLLKYAKADKRIWLAILGISWFWLVGAVVLS 246 (1140)
T ss_pred HHHHHHHHHHHHHHHhh-CCCCCCCCCCCeeccc-hHH--------HHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHH
Confidence 85544444444444333 3333221111110000 000 0012467788999999998888888888888889
Q ss_pred hhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 011529 343 WMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGL 389 (483)
Q Consensus 343 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~~ 389 (483)
++|.|+++.+|.++...+++.+..+++.++|.++.|++.++..+++.
T Consensus 247 ~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~ 293 (1140)
T PRK06814 247 QLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLY 293 (1140)
T ss_pred HhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeee
Confidence 99999999899999999999999999999999999999987766543
No 79
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.93 E-value=7.8e-23 Score=199.95 Aligned_cols=273 Identities=11% Similarity=0.012 Sum_probs=197.6
Q ss_pred HHHHHHHHHHHhhhhhhhHHhhhh-hhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHH
Q 011529 106 VVLCFSAFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATA 184 (483)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 184 (483)
++.+...+++.+.....+.+.+|. +.+++|.++.++|++.+++.++..+++++.|+++||+|||+.++.+....+++..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~ 83 (396)
T TIGR00882 4 FWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFA 83 (396)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 344555666677777778888877 4567899999999999999999999999999999999999999877666654433
Q ss_pred Hhh---hhhc---ccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccC
Q 011529 185 LTP---VAAK---LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG 258 (483)
Q Consensus 185 ~~~---~~~~---~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g 258 (483)
... +.+. ..++.+++.+++.|++.+...+....+..+.. ++++..+|......++|.++||.+++.+.+ .+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-~~ 160 (396)
T TIGR00882 84 PFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWALCASIAGILFS-ID 160 (396)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhh--hhcccccchhhhhcccHHHHHHHHHhhhhc-cC
Confidence 221 1110 02334566788889988888888888877753 334567788889999999999999998865 59
Q ss_pred chHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChhHHHHHHHHHHHHHHHH
Q 011529 259 WPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTF 338 (483)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (483)
|+..|++.+++.++..++.+...++++++++. + +. .+ .++++.+..+.++++|||.++...+..++....+.
T Consensus 161 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~---~~--~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~ 232 (396)
T TIGR00882 161 PQIVFWLGSGFALILMLLLMFAKPKAPSSATV-A--NA---LG--ANASAFSLKLALELFRQRKFWMFVLYVVGVACVYD 232 (396)
T ss_pred chHHHHHHHHHHHHHHHHHHHhCCCCchhhhh-h--cc---cc--cccCCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHH
Confidence 99999998888877665555444433221110 0 00 00 00111122356788999998877777666666666
Q ss_pred HHHHhhHHHHHHHh---CCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 011529 339 ILLTWMPTYYNQVL---HFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGL 389 (483)
Q Consensus 339 ~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~~ 389 (483)
....+.+.|+++.+ +.+....+...++..+..+++.+..+++.||+++|+.
T Consensus 233 ~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~ 286 (396)
T TIGR00882 233 VFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNA 286 (396)
T ss_pred HHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchh
Confidence 67778888888755 4455667888888888899999999999999998853
No 80
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.93 E-value=1.4e-23 Score=232.64 Aligned_cols=320 Identities=16% Similarity=0.131 Sum_probs=218.0
Q ss_pred hhHHhhhhhhhhcCCC--hhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhh---hhhcccHHH
Q 011529 122 NMSIAILPMSAEFNWN--PATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTP---VAAKLGLPF 196 (483)
Q Consensus 122 ~~~~~~~~~~~~~g~s--~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 196 (483)
......+.+..+++.+ ....+++.+++.++..++++++|+++||+|||++++++.++.+++.++.. ..+ +++.
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~--~~~~ 105 (1146)
T PRK08633 28 HKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLG--WFWL 105 (1146)
T ss_pred HHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHc--cHHH
Confidence 3344445555566654 34579999999999999999999999999999999988877665555443 335 7899
Q ss_pred HHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhc--------c-CchHHHHHHH
Q 011529 197 LLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR--------F-GWPSVFYSFG 267 (483)
Q Consensus 197 l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~--------~-g~~~~~~~~~ 267 (483)
++++|++.|++.+...++..+++.|++|+++|++++|+.+.+..+|.++|+++++++.+. + +|.+.+.+..
T Consensus 106 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 185 (1146)
T PRK08633 106 AFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVL 185 (1146)
T ss_pred HHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999876 2 3444444433
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHH
Q 011529 268 SLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTY 347 (483)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (483)
+...+..++..+..++.+.......+.+.. .........++.+++++.++...+..++..........++|.|
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (1146)
T PRK08633 186 LAVAVLGLIFAYRLPKVPAAAPEVFDKKKY-------LFPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAY 258 (1146)
T ss_pred HHHHHHHHHHHhcCcCCCCCCccccccccc-------ccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 333333333333334433221111000000 0000012246677888998888877777777777888899999
Q ss_pred HHHHhCCCcc-hhhHHhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHH
Q 011529 348 YNQVLHFNLT-ESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCM 426 (483)
Q Consensus 348 ~~~~~g~~~~-~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (483)
+.+.+|++.. ..+++.+...++.+++.++.+++.||+++++....+ .++.++.++......+.+..++..
T Consensus 259 ~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~ 329 (1146)
T PRK08633 259 AKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLG---------ALGLALSLFLLPTAPSLASVLVLF 329 (1146)
T ss_pred HHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHH---------HHHHHHHHHHHHHhhhHHHHHHHH
Confidence 9998999998 999999999999999999999999999877533211 111111111111222333333333
Q ss_pred HHhhhhhhhhhchhhhhHhhhc-cCcceeeeeee
Q 011529 427 ACSQGTDAFSQSGLYSNHQDIA-PRYSVSIISIN 459 (483)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~ 459 (483)
++.+.+.+...+...+...+.. ++.+|+++|+.
T Consensus 330 ~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~ 363 (1146)
T PRK08633 330 FLFGFSAGLFIVPLNALIQFRAPEKELGKVLAAN 363 (1146)
T ss_pred HHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHH
Confidence 3333333333444556665554 56689888744
No 81
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.92 E-value=1.1e-22 Score=200.36 Aligned_cols=269 Identities=12% Similarity=0.033 Sum_probs=179.4
Q ss_pred HHHHHHHhhhhhhhHHhhhh-hhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhh
Q 011529 110 FSAFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPV 188 (483)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 188 (483)
....++.....+...+.+|. +.+++|+|+.++|++.++..++..++++++|+++||+|||+++.++..+.+++......
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~ 95 (420)
T PRK09528 16 SLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFI 95 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHH
Confidence 34445555555566667666 55669999999999999999999999999999999999999988776665544332111
Q ss_pred ---hhc---ccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHH
Q 011529 189 ---AAK---LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSV 262 (483)
Q Consensus 189 ---~~~---~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~ 262 (483)
.+. ..+...++..++.|.+.....+....+..+. .++++..+|......++|..++|.+++.+.+ .+|+..
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~-~~~~~~ 172 (420)
T PRK09528 96 YVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIERV--SRRSGFEYGRARMWGSLGWALCAFIAGILFN-INPQIN 172 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHHH--HhhccccchhhHHhhhHHHHHHHHHHHHHHh-cCchHh
Confidence 110 0111123334444444334344444444332 3556778899999999999999999999876 489999
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChhHHHHHHHHHHHHHHHHHHHH
Q 011529 263 FYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLT 342 (483)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (483)
|++.+++.++..+..+...++++++.+..+++++ .+++....+.+..+|+|.+|.+.+..++..........
T Consensus 173 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~ 244 (420)
T PRK09528 173 FWLGSGSALILLVLLFFAKPDAPSTAKVANALGA--------NASAVSLKDALALLKLPKFWFLVLYVIGVACFYDVFDQ 244 (420)
T ss_pred HHHHHHHHHHHHHHHhcccccccchhhhccchhc--------ccccccHHHHHHHccCCCeEeehHHHHHHHHHHHHHHH
Confidence 9988877777666655544443222110000000 00111122345678899887766665555555566666
Q ss_pred hhHHHHHHHh---CCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 011529 343 WMPTYYNQVL---HFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGL 389 (483)
Q Consensus 343 ~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~~ 389 (483)
+.|.|+.+.. +.+..+.+.+.++..++.+++.++.|++.||+++|+.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~ 294 (420)
T PRK09528 245 QFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNA 294 (420)
T ss_pred HHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchh
Confidence 7888877643 4566678888888889999999999999999999853
No 82
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.92 E-value=6.1e-22 Score=178.46 Aligned_cols=263 Identities=14% Similarity=0.184 Sum_probs=223.1
Q ss_pred HHHHHHHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHH
Q 011529 103 WFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIA 182 (483)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 182 (483)
+..+..+.+..+-.--..+..+|.++.+.+++|+|.+..|++.++..++..+.+++..++..|+|.++.+..++++.+++
T Consensus 11 ~~li~gIvlia~NLR~~itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G 90 (395)
T COG2807 11 LLLLAGIVLIAFNLRPAITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAG 90 (395)
T ss_pred hHHHHHHHHHHhccchhhhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHH
Confidence 34444444444444445677889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhcc-CchH
Q 011529 183 TALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF-GWPS 261 (483)
Q Consensus 183 ~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-g~~~ 261 (483)
.++-... +.+.++.+-.+.|.+.+..+...++++.+.| +++-+..+|++....++|..+++.+.-.+.++. |||.
T Consensus 91 ~~iR~~~---~~~~L~~gt~l~G~gIav~nVLLPslIK~~F-pk~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~ 166 (395)
T COG2807 91 ILIRSLG---GLPLLFLGTLLAGAGIAVINVLLPSLIKRDF-PKRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRG 166 (395)
T ss_pred HHHHhcc---cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhc-ccchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHH
Confidence 9887665 4678899999999999999999999999999 677899999999999999999999998888876 7999
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChhHHHHHHHHHHHHHHHHHHH
Q 011529 262 VFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILL 341 (483)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (483)
...+.+..+++.++.++....+....... .+ ..+-..++|+|.-|.+.+.+.+++..++...
T Consensus 167 aL~~WAl~allAl~~WlPq~~r~~~~~~~-~~-----------------~~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~ 228 (395)
T COG2807 167 ALGFWALLALLALLIWLPQALREQAASIA-TK-----------------LVSVRKVWRSPLAWQVTLFMGLQSLLYYIVI 228 (395)
T ss_pred HHHHHHHHHHHHHHHHhhhcccccccccc-cc-----------------cccccccccCchhHHHHHHHHhhHHHHHHHH
Confidence 99999999998887776543111100000 00 1112357899999999999999999999999
Q ss_pred HhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcC
Q 011529 342 TWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKG 388 (483)
Q Consensus 342 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~ 388 (483)
.|+|.++.| .|+|..++|.+.+...+..+...+....+.+|..+++
T Consensus 229 ~WLP~ili~-~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r 274 (395)
T COG2807 229 GWLPAILID-RGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQR 274 (395)
T ss_pred HHHHHHHHH-cCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 999999999 7999999999999999999999999999999977664
No 83
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.92 E-value=2.9e-22 Score=199.11 Aligned_cols=350 Identities=13% Similarity=0.067 Sum_probs=232.7
Q ss_pred HHHHHHHHHHHhhhhhhhHHhhhhhh-hh--cCCChhhHHHHHHHHHHHHHHHHhhHHHHHhh-cCCchHHHHHHHHHHH
Q 011529 106 VVLCFSAFLLCNMDRVNMSIAILPMS-AE--FNWNPATVGLIQSSFFWGYLLTQIAGGIWADT-VGGKAVLGFGVVWWSI 181 (483)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~ 181 (483)
+..+....+...+..+...+.+|.+. ++ +|++..+.+++.+.+.++..++++++|+++|| +|||+++.++.++.++
T Consensus 12 ~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~ 91 (475)
T TIGR00924 12 LFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLML 91 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHH
Confidence 34445556666666666777777754 44 89999999999999999999999999999999 8999999999999999
Q ss_pred HHHHhhhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcc---hhHHHHHHHHHHHhHHHHHHhhHHHhhhccC
Q 011529 182 ATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAE---RSRSLALVYSGMYLGSVTGLAFSPFLIHRFG 258 (483)
Q Consensus 182 ~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~---r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g 258 (483)
+.+++++.+ +++.+++.+++.|++.+...+...++++|++|+++ |++++++.+...++|.++||.+++++.++.|
T Consensus 92 g~~~~~~~~--~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g 169 (475)
T TIGR00924 92 GHFMLAMSI--YPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYG 169 (475)
T ss_pred HHHHHHhcc--cHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999988887 78888899999999999999999999999998754 8889999999999999999999999999899
Q ss_pred chHHHHHHHHHHHHHHHHHHHhccCC---CCCCCCCChhhHHHhh--------------h---cccCC------------
Q 011529 259 WPSVFYSFGSLGTVWFTVWLSKAHSS---PAEDPQLRPAEKKLIV--------------S---SCASK------------ 306 (483)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~--------------~---~~~~~------------ 306 (483)
|++.|.+.++..++..+......+.. +++.++.++++++... . ..+..
T Consensus 170 ~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (475)
T TIGR00924 170 YHVGFNLAAVGMVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLALLAALALVFFCAWLMHHVVIANILLMTVTLA 249 (475)
T ss_pred hHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 99999988765555444433322221 1111111111100000 0 00000
Q ss_pred --------CCCcccchhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcch----hhHHhHHHHHHHHHHH
Q 011529 307 --------EPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTE----SGLFCVLPWLTMAFSA 374 (483)
Q Consensus 307 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~----~~~~~~~~~~~~~i~~ 374 (483)
...+.....+..|...+..+.+...++...+....+.++.+.++..+.+... .+++.++..+..++..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~ 329 (475)
T TIGR00924 250 VIIFFFRLAFKPRLDAVARNKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGS 329 (475)
T ss_pred HHHHHHHHHHhccCCHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHH
Confidence 0000001111112223444555556666666677777888887754443222 6688888888888887
Q ss_pred HHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhh---------ccchhHHHHHHHHHhhhhhhhhhchhhhhHh
Q 011529 375 NLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLS---------HVDSPAMAVLCMACSQGTDAFSQSGLYSNHQ 445 (483)
Q Consensus 375 ~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (483)
++..++..|.++|+.......+. .++.++.+..+.... ...+.++.+....+.........|...+...
T Consensus 330 p~~~~~~~~l~~~~~~~~~~~k~--~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~ 407 (475)
T TIGR00924 330 PVLAMIWTRLGRKGKDPTTPLKF--TLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWT 407 (475)
T ss_pred HHHHHHHHHHHhCCCCCCcHHHH--HHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 77666666666642211111111 222222222221111 1235565666666666667777888888888
Q ss_pred hhccC-cceeeeeee
Q 011529 446 DIAPR-YSVSIISIN 459 (483)
Q Consensus 446 ~~~~~-~~g~~~g~~ 459 (483)
+..|+ .+|+.+|+.
T Consensus 408 ~~aP~~~~g~~~g~~ 422 (475)
T TIGR00924 408 KIAPQRLMGQMLGMW 422 (475)
T ss_pred HhCCHHHHHHHHHHH
Confidence 87764 589988854
No 84
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.92 E-value=6.8e-24 Score=192.49 Aligned_cols=238 Identities=19% Similarity=0.183 Sum_probs=209.9
Q ss_pred hhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhcccHHHHHHHHHHHhhhhhc
Q 011529 131 SAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGV 210 (483)
Q Consensus 131 ~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~ 210 (483)
.++.+-+..++|++++...+.+.+.+++.|.+.||+|+|..+++|+.++..+++++++.. +++.++++|.++|+|.+.
T Consensus 98 ~~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~--sy~~l~vAR~LQgvgsA~ 175 (464)
T KOG3764|consen 98 AISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGN--SYPMLFVARSLQGVGSAF 175 (464)
T ss_pred ccCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcc--hhHHHHHHHHHhhhhHHH
Confidence 344566888999999999999999999999999999999999999999999999999999 999999999999999999
Q ss_pred chhHHHHHHhhhcCCc-chhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHHHHHHhccCCCCCCC
Q 011529 211 AMPAMNNILSKWVPVA-ERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDP 289 (483)
Q Consensus 211 ~~~~~~~~~~~~~~~~-~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (483)
.+++..++++|.+|++ +|++++|+...+.++|..+||+++|++.+..|.+.+|+++++++++-..+.++..++.+.+.+
T Consensus 176 ~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~~ 255 (464)
T KOG3764|consen 176 ADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDPD 255 (464)
T ss_pred HHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCcc
Confidence 9999999999999865 579999999999999999999999999999999999999999999988887777665433322
Q ss_pred CCChhhHHHhhhcccCCCCCcccchhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcchhhHHhHHHHHH
Q 011529 290 QLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLT 369 (483)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 369 (483)
... +..++++++++|.++.........+.........++.+..+....+..+.|+.+....+.
T Consensus 256 ~~~-----------------~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~ 318 (464)
T KOG3764|consen 256 STE-----------------QGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLS 318 (464)
T ss_pred ccc-----------------cCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcceeeeecccccc
Confidence 111 123466889999999888777777777778888889988888886666999999999999
Q ss_pred HHHHHHHHHHHHHHHhhc
Q 011529 370 MAFSANLGGWIADTLVSK 387 (483)
Q Consensus 370 ~~i~~~~~g~l~dr~g~~ 387 (483)
.+++..+.|.+.||++..
T Consensus 319 y~ig~~lfg~la~k~~~~ 336 (464)
T KOG3764|consen 319 YAIGTNLFGKLADKYPHL 336 (464)
T ss_pred hhccCchHHHHHHhcCch
Confidence 999999999999999955
No 85
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.91 E-value=1.6e-21 Score=190.34 Aligned_cols=265 Identities=12% Similarity=0.062 Sum_probs=202.5
Q ss_pred HHHHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHH--HHHHHHHHHHHHhhHHH-HHhhcCCchHHHHHHHHH-HH
Q 011529 106 VVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLI--QSSFFWGYLLTQIAGGI-WADTVGGKAVLGFGVVWW-SI 181 (483)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~--~~~~~~~~~~~~~~~g~-l~dr~g~r~~~~~~~~~~-~~ 181 (483)
+..+...++.++...+...+.+|.+.++.|.|..++|++ .++..+...+.+|+++. ..||+||||..++...+. ++
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~ 82 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSA 82 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHH
Confidence 455677788899999999999999999999999999997 46678888888888844 789999999875555332 21
Q ss_pred HHHHhh---hhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccC
Q 011529 182 ATALTP---VAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG 258 (483)
Q Consensus 182 ~~~~~~---~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g 258 (483)
...... .... ....++...++.+++.+...+...++..|..++++++...+....+..+|.++|+...+++.++.|
T Consensus 83 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~g 161 (390)
T TIGR02718 83 CLASLALVGPDVA-GAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFG 161 (390)
T ss_pred HHHHHHcCCcchh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 222222 2221 233444555666677788888889999999988888988999999889999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChhHHHHHHHHHHHHHHHH
Q 011529 259 WPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTF 338 (483)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (483)
||..|++.+++.++..+..+...+++++++++ ++. +..++++++|+|.++...+..++......
T Consensus 162 w~~~f~~~a~l~~~~~~~~~~~~~~~~~~~~~-~~~---------------~~~~~~~~l~~~~~~~~~~~~~l~~~~~~ 225 (390)
T TIGR02718 162 QRPAFLLVACVPLASLVCVLWLKDRAVASPEA-PLA---------------RRASLFRFFRRPLAWSLLALALLSAMTAV 225 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCcCcccc-chh---------------hHHHHHHHHcCcCHHHHHHHHHHHHHHHH
Confidence 99999999988877666655544433211110 000 01235678899999888888888888888
Q ss_pred HHHHhhHHHHHHHhCCCcchhhHHhHHHHH-HHHHHHHHHHHHHHHHhhcC
Q 011529 339 ILLTWMPTYYNQVLHFNLTESGLFCVLPWL-TMAFSANLGGWIADTLVSKG 388 (483)
Q Consensus 339 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~i~~~~~g~l~dr~g~~~ 388 (483)
....+.+.|++| .|+++++++.+....++ ..+++.++.|++.||+++|+
T Consensus 226 ~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~ 275 (390)
T TIGR02718 226 SGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWR 275 (390)
T ss_pred HHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 888899999988 79999999999888764 66778899999999999884
No 86
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.91 E-value=1.2e-21 Score=194.89 Aligned_cols=359 Identities=14% Similarity=0.135 Sum_probs=218.5
Q ss_pred HHHHHHHHHHHHhhhhhhhHHhhh-hhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhh-cCCchHHHHHHHHHHHH
Q 011529 105 IVVLCFSAFLLCNMDRVNMSIAIL-PMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADT-VGGKAVLGFGVVWWSIA 182 (483)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~ 182 (483)
.+..++...+...+..+.....++ ++.+++|.+..+.+++.+.+.....+..+++|+++|| +|||++++++.+++.++
T Consensus 15 ~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g 94 (489)
T PRK10207 15 PFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIG 94 (489)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHH
Confidence 344455555556566555555444 4678899999999999999998888999999999999 99999999999999999
Q ss_pred HHHhhhhhcccHH-HHHHHHHHHhhhhhcchhHHHHHHhhhcCCc--chhHHHHHHHHHHHhHHHHHHhhHHHhhhccCc
Q 011529 183 TALTPVAAKLGLP-FLLVVRVFMGIGEGVAMPAMNNILSKWVPVA--ERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGW 259 (483)
Q Consensus 183 ~~~~~~~~~~~~~-~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~--~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~ 259 (483)
.+.++++. +.. .+++.|+++|+|.|...+...+++.|.+|++ +|++++++++...++|..+||.+++++.++.||
T Consensus 95 ~~~~~~~~--~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw 172 (489)
T PRK10207 95 YFMTGMSL--LKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGY 172 (489)
T ss_pred HHHHHHhc--cchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhCh
Confidence 99988876 433 4557899999999999999999999999876 457899999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccCCCCC----CCCCChhhHHHh------------hhc-ccCCCCC-------------
Q 011529 260 PSVFYSFGSLGTVWFTVWLSKAHSSPAE----DPQLRPAEKKLI------------VSS-CASKEPV------------- 309 (483)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~------------~~~-~~~~~~~------------- 309 (483)
|+.|++.++..++..+..... ++..++ .++.+.+..... ... .......
T Consensus 173 ~~~F~i~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 251 (489)
T PRK10207 173 SVTYNLCGAGLIIALLVYFAC-RGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHNVEVANLVLIVLSIVVTI 251 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHc-chhhcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 999998655443333333222 211111 101000000000 000 0000000
Q ss_pred ----cccchhhhhcChhHHHHHHH--HHHHHHHHHHHHHhhHHHHHHHhCCCc----chhhHHhHHHHHHHHHHHHHHHH
Q 011529 310 ----KTIPWGLILSKPPVWALIVS--HFCHNWGTFILLTWMPTYYNQVLHFNL----TESGLFCVLPWLTMAFSANLGGW 379 (483)
Q Consensus 310 ----~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~----~~~~~~~~~~~~~~~i~~~~~g~ 379 (483)
......+.+|+|.+....+. ..+....+....+.++.+.++..+.+. .....+.+...+..++..++.++
T Consensus 252 ~f~~~~~~~~~~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~ 331 (489)
T PRK10207 252 IFFREAFKLDKTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAG 331 (489)
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHH
Confidence 00000134555554433322 334444455555777778775333221 12234445555667778888899
Q ss_pred HHHHHhhcCCchhHHHHHHHHHHHHHHHHHH-----HHhh-c--cchhHHHHHHHHHhhhhhhhhhchhhhhHhhhc-cC
Q 011529 380 IADTLVSKGLSVTTVRKIMQSIGFLGPAFFL-----TQLS-H--VDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIA-PR 450 (483)
Q Consensus 380 l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 450 (483)
+.||.++|+.-.....+......+...+... .... . ..+.++.+....+......+..+...+...+.. ++
T Consensus 332 l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~ 411 (489)
T PRK10207 332 IYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQH 411 (489)
T ss_pred HHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHH
Confidence 9999998863222112222222211111111 1111 1 123344444444444444455555555555544 45
Q ss_pred cceeeeee-eecCCCCc
Q 011529 451 YSVSIISI-NILRAPGS 466 (483)
Q Consensus 451 ~~g~~~g~-~~~~~~g~ 466 (483)
.+|.++|. +..+..|.
T Consensus 412 ~~g~~~g~~~l~~~ig~ 428 (489)
T PRK10207 412 LMGFILGMWFLTQAAAF 428 (489)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 68888884 33333333
No 87
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.90 E-value=4.6e-22 Score=197.36 Aligned_cols=257 Identities=14% Similarity=0.071 Sum_probs=191.0
Q ss_pred hhhhhHHh-hhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhh----cCCch-HHHHHHHHHHHHHHHhhhhhcc
Q 011529 119 DRVNMSIA-ILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADT----VGGKA-VLGFGVVWWSIATALTPVAAKL 192 (483)
Q Consensus 119 ~~~~~~~~-~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr----~g~r~-~~~~~~~~~~~~~~~~~~~~~~ 192 (483)
....+... .+.+.+++|+++.++|++.++..+...+..|+.|+++|| +|||| .++.+.+..+++.+++...+..
T Consensus 14 ~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~ 93 (437)
T TIGR00792 14 IFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDF 93 (437)
T ss_pred HHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCC
Confidence 33444443 455778899999999999999999999999999999998 67744 5777878888777777665521
Q ss_pred ----cHHHHHHHHHHHhhhhhcchhHHHHHHhhhcC-CcchhHHHHHHHHHHHhHHHHHHhhHHHhhh-------ccCch
Q 011529 193 ----GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVP-VAERSRSLALVYSGMYLGSVTGLAFSPFLIH-------RFGWP 260 (483)
Q Consensus 193 ----~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-------~~g~~ 260 (483)
..+.+++.+++.+++.+...+...++..|..+ +++|++..++.+.+..+|..+++.+.+.+.. ..+|+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~ 173 (437)
T TIGR00792 94 SATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWF 173 (437)
T ss_pred CcchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHH
Confidence 14566777888898888888888888888874 6899999999999999998887776665542 45799
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChhHHHHHHHHHHHHHHHHHH
Q 011529 261 SVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFIL 340 (483)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (483)
+.+.+.+++.++..+...+..+|++++.++.++ + +......++.+++||.++...+..++........
T Consensus 174 ~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~~~-~-----------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 241 (437)
T TIGR00792 174 MFALVLALIGVVSLIICFFGTKERYSEIPKNIE-K-----------KLSLKQIFKALFKNDQLLILCLAYLFYNLAFNIK 241 (437)
T ss_pred HHHHHHHHHHHHHHHHHHcCCEecCCCCCcccc-c-----------CCCHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 999988888877766665555554321111000 0 0011224667889999998888888887777776
Q ss_pred HHhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcC
Q 011529 341 LTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKG 388 (483)
Q Consensus 341 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~ 388 (483)
..+.+.|.+...+ +....+.+..+..++.+++.++.+++.||+|+|+
T Consensus 242 ~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~ 288 (437)
T TIGR00792 242 NGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKI 288 (437)
T ss_pred cchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHH
Confidence 6666777666555 4566677777788999999999999999999884
No 88
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.90 E-value=2.1e-21 Score=191.54 Aligned_cols=275 Identities=15% Similarity=0.137 Sum_probs=200.1
Q ss_pred HHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhh
Q 011529 109 CFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPV 188 (483)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 188 (483)
+++.....++.....+..++.+..++|- .....|+.+...++..+..++.|+++|.+|||..++.+.++..++.++++.
T Consensus 49 ~~~~~~~~~~~~~~~a~~l~~I~~diG~-~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~at 127 (599)
T PF06609_consen 49 FSLAVIAAYFVLVLPASILPYINADIGG-SDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCAT 127 (599)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHhcCC-CccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhc
Confidence 4444444445555556778889999995 467788999999999999999999999999999999999999999999999
Q ss_pred hhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHHHHH
Q 011529 189 AAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGS 268 (483)
Q Consensus 189 ~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~ 268 (483)
++ |...++++..+.|+|.|... .....++|..|.|.|....++......+....++.++..+..+.+|||.|++..+
T Consensus 128 A~--~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i 204 (599)
T PF06609_consen 128 AQ--NMNTFIAGMVLYGVGAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFII 204 (599)
T ss_pred CC--cHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHH
Confidence 99 99999999999999977654 4566689999999998888877776666666788888777777899999999988
Q ss_pred HHHHHHHHHHHhccCCCCCCC--C-CChhh-HHHh--------------------hhcc-----cC--------------
Q 011529 269 LGTVWFTVWLSKAHSSPAEDP--Q-LRPAE-KKLI--------------------VSSC-----AS-------------- 305 (483)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~--~-~~~~~-~~~~--------------------~~~~-----~~-------------- 305 (483)
...+.++..+++..+++.++. + ....+ -++. .... +.
T Consensus 205 ~~~i~~vl~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~L 284 (599)
T PF06609_consen 205 WSGIALVLIFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLL 284 (599)
T ss_pred HHHHHHHHHHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHH
Confidence 877766554444333322211 1 11111 1110 0000 00
Q ss_pred ------C---C-CCcccchhhhhcC-hhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcc---hhhHHhHHHHHHHH
Q 011529 306 ------K---E-PVKTIPWGLILSK-PPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLT---ESGLFCVLPWLTMA 371 (483)
Q Consensus 306 ------~---~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~ 371 (483)
+ . +.+..+. +++|+ |.+...++..++....++....+.|......++-++. ..++.....+++..
T Consensus 285 v~F~~wE~~~~~~~Pl~P~-~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~ 363 (599)
T PF06609_consen 285 VAFVVWEWFGAPKDPLFPH-RLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSC 363 (599)
T ss_pred HHHHHhhhhccCCCCcCCH-HHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHH
Confidence 0 0 1112233 46676 4566666677777777788888888888877776653 56778888888899
Q ss_pred HHHHHHHHHHHHHhhcC
Q 011529 372 FSANLGGWIADTLVSKG 388 (483)
Q Consensus 372 i~~~~~g~l~dr~g~~~ 388 (483)
+|.++.|.+..++++-|
T Consensus 364 ~g~~i~g~l~~~ir~~K 380 (599)
T PF06609_consen 364 AGAVILGLLFSKIRHIK 380 (599)
T ss_pred HHHHHHHHHHHHccchh
Confidence 99999999998887553
No 89
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.89 E-value=5.1e-21 Score=187.62 Aligned_cols=319 Identities=11% Similarity=-0.002 Sum_probs=205.6
Q ss_pred HHHHHHHhhhhhhhHHhhhh-hhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCC-chHHHHHHHHHHHHHHHhh
Q 011529 110 FSAFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGG-KAVLGFGVVWWSIATALTP 187 (483)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~-r~~~~~~~~~~~~~~~~~~ 187 (483)
...+++.+.....+.+.++. +.+++|++..++|++.++..++..++++++|+++||+|+ |+++.++.++..++..+..
T Consensus 8 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~ 87 (418)
T TIGR00889 8 KFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAA 87 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 44455556666666555554 677899999999999999999999999999999999965 7788888888878877777
Q ss_pred hhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhh--------cCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCc
Q 011529 188 VAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKW--------VPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGW 259 (483)
Q Consensus 188 ~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~--------~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~ 259 (483)
+.+ +++.+++.+++.|++.+...+...++..+. .....|.+..| .+|.++||.+++.+....+|
T Consensus 88 ~~~--~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~~~ 159 (418)
T TIGR00889 88 QVT--TPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIELSN 159 (418)
T ss_pred Hhc--CHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcccchh
Confidence 777 899999999999998777777666654322 22223444443 57889999999887433234
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChhHHHHHHHHHHHHHHHHH
Q 011529 260 PSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFI 339 (483)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (483)
. .|++.+++.++..++. +..+|.++.+++.+...++ ....+.+.++|+|.++.+.+..++.......
T Consensus 160 ~-~f~~~~~~~~~~~~~~-~~~~e~~~~~~~~~~~~~~-----------~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~ 226 (418)
T TIGR00889 160 I-QLYITAGSSALLGVFA-LTLPDIPVAKSTAKMSIKV-----------MLGLDAFILFKNKRMAIFFFFSMLLGAPLQI 226 (418)
T ss_pred H-HHHHHHHHHHHHHHHH-hcCCCCCCCccccccCHHH-----------HhhhhHHHHhcCCCeeeHHHHHHHHHhHHHH
Confidence 4 4555555555544443 3444433221111100000 0011245678999988888887777776767
Q ss_pred HHHhhHHHHHHHhCCCc--------chhhHHhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHH
Q 011529 340 LLTWMPTYYNQVLHFNL--------TESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLT 411 (483)
Q Consensus 340 ~~~~~~~~~~~~~g~~~--------~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (483)
...+.+.|+++ .|.++ ...+...++..+..+++.+..|++.||+|+|+. +..+.++..+.+.
T Consensus 227 ~~~~~~~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~---------l~~~~~~~~v~~~ 296 (418)
T TIGR00889 227 TNIFGNGFLHE-FGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKV---------MLLSLVAWALRFG 296 (418)
T ss_pred HHHhHHHHHHH-hcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHH---------HHHHHHHHHHHHH
Confidence 77888888877 56543 566888999999999999999999999998842 2222222222221
Q ss_pred Hhhc-cc---hhHHHHHHHHHhhhhhhhhhchhhhhHhhhcc-Ccceeeeeee
Q 011529 412 QLSH-VD---SPAMAVLCMACSQGTDAFSQSGLYSNHQDIAP-RYSVSIISIN 459 (483)
Q Consensus 412 ~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~ 459 (483)
.... .. ..+..++...+.+...+...+.......+..| +.+|+++|+.
T Consensus 297 l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~ 349 (418)
T TIGR00889 297 FFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLF 349 (418)
T ss_pred HHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
Confidence 1111 11 12222222333333333444445556666555 6688888855
No 90
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.89 E-value=2.3e-20 Score=179.67 Aligned_cols=313 Identities=16% Similarity=0.151 Sum_probs=211.9
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhc-ccHHHHHHHHHHHhhhhhcchhHHHHHH
Q 011529 141 VGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAK-LGLPFLLVVRVFMGIGEGVAMPAMNNIL 219 (483)
Q Consensus 141 ~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~l~G~~~~~~~~~~~~~~ 219 (483)
.+.+.+++.+|.++|+++.|+++||+|||..+.++.++..++.++..++.. .++..++++|++.|+..+.......-++
T Consensus 62 wS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl 141 (485)
T KOG0569|consen 62 WSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYL 141 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 467788999999999999999999999999999998888887776655431 1678999999999999999999999999
Q ss_pred hhhcCCcchhHHHHHHHHHHHhHHHHHHhhHH-Hhh-hccCchHHHHHHHHHHHHHHHHHHHhccCCCCC----CCCCCh
Q 011529 220 SKWVPVAERSRSLALVYSGMYLGSVTGLAFSP-FLI-HRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAE----DPQLRP 293 (483)
Q Consensus 220 ~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~-~l~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 293 (483)
.|..|++.||....+.+.+..+|.+++..++. .+. +.-.|++.+....+.+++..+...+ .||.|+- +.+.++
T Consensus 142 ~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~-~PESPk~Ll~~k~~~~~ 220 (485)
T KOG0569|consen 142 TEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPF-LPESPKYLLIKKGDEEE 220 (485)
T ss_pred hhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhc-CCCCcchHHHHcCCHHH
Confidence 99999999999999999999999999966653 333 3345998888888777776655544 4555541 111100
Q ss_pred ---------------hhHHHhhh--cccCCCCCcccchhhhhcChhHHHHH-----HHHHHHHHHHHHHHHhhHHHHHHH
Q 011529 294 ---------------AEKKLIVS--SCASKEPVKTIPWGLILSKPPVWALI-----VSHFCHNWGTFILLTWMPTYYNQV 351 (483)
Q Consensus 294 ---------------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 351 (483)
++.++..+ +.++.++.+..+++++++++..+.-. +.......+.+.+..|...++++
T Consensus 221 A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~- 299 (485)
T KOG0569|consen 221 ARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKT- 299 (485)
T ss_pred HHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHH-
Confidence 11111111 11122223566788999887765432 22333334456667777777777
Q ss_pred hCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhccch--h-HHHHHHHHH
Q 011529 352 LHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDS--P-AMAVLCMAC 428 (483)
Q Consensus 352 ~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~ 428 (483)
.|++..++.+.....++...+.++++.++.||+|||.++..+... ..+..++............. . ......+..
T Consensus 300 aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~--~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~ 377 (485)
T KOG0569|consen 300 AGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSL--MAVALLLMSIALFLSNSFGSWLSYLCIAAIFLF 377 (485)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHH--HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 799999999999999999999999999999999999766554421 11222222222222212211 1 112233333
Q ss_pred hhhhhhhhhchhhhhHhhhccC-cceeeee
Q 011529 429 SQGTDAFSQSGLYSNHQDIAPR-YSVSIIS 457 (483)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g 457 (483)
.........|.-+-+..|+.|+ .|..+++
T Consensus 378 ~~~f~~G~gpi~~fi~aELf~~~~R~aa~s 407 (485)
T KOG0569|consen 378 IISFAIGPGPIPWFIGAELFPQSARSAAQS 407 (485)
T ss_pred HHhhhcCCCchhHHHHHHhCCccchHHHHH
Confidence 3334444455667777777654 4666654
No 91
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.89 E-value=1.1e-20 Score=190.44 Aligned_cols=284 Identities=18% Similarity=0.155 Sum_probs=199.8
Q ss_pred HHHHHHHHHHHhhh--hhhhHHhhhhhhhhc-----CCCh--hhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHH
Q 011529 106 VVLCFSAFLLCNMD--RVNMSIAILPMSAEF-----NWNP--ATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGV 176 (483)
Q Consensus 106 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-----g~s~--~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~ 176 (483)
.....++.+..+.+ .....+....+.++. ..+. .+.+++.+...++..+++++.|+++|++|||+.++++.
T Consensus 47 ~~~~~~~~~~fg~~g~~g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~ 126 (513)
T KOG0254|consen 47 ALVAALGGLLFGYDGDIGGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAV 126 (513)
T ss_pred HHHHHHHHHHhCcccccccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 33344444444443 344455555555432 2222 35599999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhc
Q 011529 177 VWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR 256 (483)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 256 (483)
+++.++.+++++++ |++.++++|++.|+|.|......+.+++|..|++.||...+..+....+|..++..++....+.
T Consensus 127 ~~~~iG~ii~~~a~--~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~ 204 (513)
T KOG0254|consen 127 VLFLIGAIIIALAP--SWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKV 204 (513)
T ss_pred HHHHHHHHHHHHhh--hHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccC
Confidence 99999999999999 9999999999999999999999999999999999999999999999999999995554444332
Q ss_pred -cCchHHHHHHHHHHHHHHHHHHHhccCCCCCCCC-CChhhHHH-------------------hh-hcc-cCCCCCcccc
Q 011529 257 -FGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQ-LRPAEKKL-------------------IV-SSC-ASKEPVKTIP 313 (483)
Q Consensus 257 -~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-------------------~~-~~~-~~~~~~~~~~ 313 (483)
.+||..+.+..+.+++..+. ..+.|++|+.--+ .+..+.+. .. ... +.........
T Consensus 205 ~~~Wr~~~~~~~i~~~~~~~~-~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (513)
T KOG0254|consen 205 YAGWRIPLGLALIPAVILALG-MLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKAS 283 (513)
T ss_pred CccHHHHHHHHHHHHHHHHHH-HHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhccccccc
Confidence 48999988888888887777 6666666542110 01100000 00 000 0000011112
Q ss_pred hhhhhc----ChhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 011529 314 WGLILS----KPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGL 389 (483)
Q Consensus 314 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~~ 389 (483)
++++++ ++.++...+..+.+..+.+....|.+.+++. .|.+... .....+.++..+++.+++..+.||+|||++
T Consensus 284 ~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~-~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~l 361 (513)
T KOG0254|consen 284 WGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKS-AGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKL 361 (513)
T ss_pred HHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHh-cCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 333332 2334455666666666667778888888887 5766443 455556677788888888999999999976
Q ss_pred chhHH
Q 011529 390 SVTTV 394 (483)
Q Consensus 390 ~~~~~ 394 (483)
+..+.
T Consensus 362 ll~s~ 366 (513)
T KOG0254|consen 362 LLFGA 366 (513)
T ss_pred HHHhH
Confidence 66554
No 92
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.88 E-value=9.5e-21 Score=169.94 Aligned_cols=360 Identities=13% Similarity=0.130 Sum_probs=232.3
Q ss_pred cCChhHHHHHHHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHH
Q 011529 98 EFPKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVV 177 (483)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 177 (483)
..+.+|........+.....+.......+.|.+.+..|.+..+..++......+..+++..+|.++|++|||+...+..+
T Consensus 72 fgrfq~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l 151 (528)
T KOG0253|consen 72 FGRFQWYLFFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFL 151 (528)
T ss_pred cccchhhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHH
Confidence 34556666666666666666655566667788888999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhcc
Q 011529 178 WWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF 257 (483)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 257 (483)
..++...+...++ |+..+.+.|.+.|+|.|+ .|...++-.|..|..+|...+-.. ..+.+|.+....+.-..+.++
T Consensus 152 ~t~v~~~is~~sp--nf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~ 227 (528)
T KOG0253|consen 152 VTGVFGVISGASP--NFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNF 227 (528)
T ss_pred HHHHHHHhhcCCC--CeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999 999999999999999998 888889999999988888777666 999999999999999999999
Q ss_pred CchHHHHHHHHHHHHHHHHHHHhccCCCCCC-CCCChhhHH----------------------------H----hhhccc
Q 011529 258 GWPSVFYSFGSLGTVWFTVWLSKAHSSPAED-PQLRPAEKK----------------------------L----IVSSCA 304 (483)
Q Consensus 258 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----------------------------~----~~~~~~ 304 (483)
||||.+........+.+....+ .++.++-. .+.++.+.- + ..+.+.
T Consensus 228 gwr~~l~~~~~pl~~~a~f~~w-~~ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~ 306 (528)
T KOG0253|consen 228 GWRYLLFTSSTPLMFAARFLVW-VYESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKS 306 (528)
T ss_pred hHHHHHHHHHhHHHHHHHHHhh-cccCcchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhh
Confidence 9999988888665555544444 44443310 000000000 0 000000
Q ss_pred CCCCCcccchhhhhcC---hhHHHHHHHHHHHHHHHHHHHHhhHHHHHH-----------------HhCCC--cchhhHH
Q 011529 305 SKEPVKTIPWGLILSK---PPVWALIVSHFCHNWGTFILLTWMPTYYNQ-----------------VLHFN--LTESGLF 362 (483)
Q Consensus 305 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~g~~--~~~~~~~ 362 (483)
...++...+...++.. +....+...++...+.+++........++. ..+-. ...--.=
T Consensus 307 ~a~ke~rg~~~nLlsp~lrkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrd 386 (528)
T KOG0253|consen 307 SAAKEVRGGTTNLLSPKLRKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRD 386 (528)
T ss_pred ccccccccchHhhcChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHH
Confidence 0111112223333321 222233333444444444443333333222 11100 1111111
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHhhhhhhhhhchhhh
Q 011529 363 CVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYS 442 (483)
Q Consensus 363 ~~~~~~~~~i~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (483)
..+..+....|.++.++++||+|||+. ++..++...++.+........-...++.+.+-.+........+.
T Consensus 387 llitslaefPGlLIt~~iverlGRKkT---------Mal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYv 457 (528)
T KOG0253|consen 387 LLITSLAEFPGLLITGVIVERLGRKKT---------MALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYV 457 (528)
T ss_pred HHHHHHhhCCchhHHHHHHHHhcchhH---------HHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEE
Confidence 234467888999999999999999952 23333333333333332222223333333444444455566788
Q ss_pred hHhhhccCc-ceeeee--eeecCCCCceeEEe
Q 011529 443 NHQDIAPRY-SVSIIS--INILRAPGSHCILC 471 (483)
Q Consensus 443 ~~~~~~~~~-~g~~~g--~~~~~~~g~~~~~~ 471 (483)
+..++.|.. |+++.| -.+.|..|..+|.+
T Consensus 458 YtPEVyPTavRatgvGtcSsmaRIggI~~p~i 489 (528)
T KOG0253|consen 458 YTPEVYPTAVRATGVGTCSSMARIGGIFSPVI 489 (528)
T ss_pred ecCcccchhhhhcchhhhhhHHhhhhhhhhHH
Confidence 888988843 555554 66778888888754
No 93
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.88 E-value=5.6e-21 Score=172.61 Aligned_cols=322 Identities=16% Similarity=0.040 Sum_probs=202.8
Q ss_pred hhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhcccHHHHHHHHHHHhhhh
Q 011529 129 PMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGE 208 (483)
Q Consensus 129 ~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~ 208 (483)
...+..+.+....|++.+.+++...+.++.+|.++||+|||+++.++.+..++...+.+++. |+..+++.|++.|+..
T Consensus 58 a~~~~~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~--~F~afv~aR~l~Gi~k 135 (451)
T KOG2615|consen 58 AIGEPDGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSR--NFAAFVLARFLGGIFK 135 (451)
T ss_pred hhCCcccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHhhhhcc
Confidence 34444455677789999999999999999999999999999999999999999999999999 8977777799999997
Q ss_pred hcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhh---ccC-chHHH--HHHHHHHHHHHHHHHHhcc
Q 011529 209 GVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH---RFG-WPSVF--YSFGSLGTVWFTVWLSKAH 282 (483)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~---~~g-~~~~~--~~~~~~~~~~~~~~~~~~~ 282 (483)
+ ......++++|.+++|+|+.+++..+...++|.++||.++|++.. ..| +..++ ++..++...-.....++.|
T Consensus 136 g-nl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lp 214 (451)
T KOG2615|consen 136 G-NLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLP 214 (451)
T ss_pred C-chHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCC
Confidence 6 457789999999999999999999999999999999999999987 223 21222 1111111111122233344
Q ss_pred CCCCCCCCCChhh-HHHhhhcccCCCCCcccchhhhhcChhH-------HHHHHHHHHHHHHHHHHHHhhHHHHHHHhCC
Q 011529 283 SSPAEDPQLRPAE-KKLIVSSCASKEPVKTIPWGLILSKPPV-------WALIVSHFCHNWGTFILLTWMPTYYNQVLHF 354 (483)
Q Consensus 283 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 354 (483)
|+-+.+++.++.. ..+..+..++..+.....--..+||+.. ..+.+..+.+...+.....+.+.+-++.+|+
T Consensus 215 ETL~~rk~~~~~~~~~~~~~~~~~~~~~~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ 294 (451)
T KOG2615|consen 215 ETLPLRKRNDEHSTLQEAADDRLALLKFARIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTHGRFGY 294 (451)
T ss_pred ccccchhhcccccchhhhhhhhhhhcchhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCC
Confidence 4422222221110 0000000000001000001123344432 2344445555555555555555555677899
Q ss_pred CcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHhhhhhh
Q 011529 355 NLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDA 434 (483)
Q Consensus 355 ~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (483)
++.+.|-+++..++.+.+......+..+|.+.. ........+..+.-.++..........+.....+-.+...
T Consensus 295 ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~-------~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~sf~~A 367 (451)
T KOG2615|consen 295 SSMQQGKVLSTTGLLMLVIQLALVPILPRYKGN-------IKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKSFSTA 367 (451)
T ss_pred ChhhheeeeehhhHHHHHHHHhccccccccccc-------hhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHHHHHH
Confidence 999999999998888887777766666665421 1112222222333333333334444444444444445555
Q ss_pred hhhchhhhhHhhhcc-Ccceeeeeeee
Q 011529 435 FSQSGLYSNHQDIAP-RYSVSIISINI 460 (483)
Q Consensus 435 ~~~~~~~~~~~~~~~-~~~g~~~g~~~ 460 (483)
...+.+...+....| +++|++.|+..
T Consensus 368 ~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~ 394 (451)
T KOG2615|consen 368 SVVTCLTSLVHKYGPQSQRGTLNGIFR 394 (451)
T ss_pred HhhHHHHHHHHhcCCcccchHHHHHHH
Confidence 566667777666554 67899887543
No 94
>PTZ00207 hypothetical protein; Provisional
Probab=99.87 E-value=3.6e-19 Score=177.10 Aligned_cols=284 Identities=15% Similarity=0.125 Sum_probs=204.9
Q ss_pred CChhHHHHHHHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHH
Q 011529 99 FPKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVW 178 (483)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 178 (483)
..++|..+.......... ...+.++.+.+.+.+++|+|..+++++.++.. ....++++.|++.||+|+|+++.++.++
T Consensus 23 e~~Rw~~lva~~~~~~~~-g~~y~fsv~s~~L~~~lgls~~~l~~i~svg~-~~g~~~lp~G~L~Dr~G~R~vllig~ll 100 (591)
T PTZ00207 23 EPRRFALLVLGAFCSICT-SFMYAFNLISGAMQARYNLTQRDLSTITTVGI-AVGYFLLPYSFIYDYLGPRPIFVLSMTV 100 (591)
T ss_pred ccchHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcCHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 345666555444444333 33445667788899999999999999988744 4456788899999999999999999999
Q ss_pred HHHHHHHhhhhhc----ccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHH-HHhhHHHh
Q 011529 179 WSIATALTPVAAK----LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVT-GLAFSPFL 253 (483)
Q Consensus 179 ~~~~~~~~~~~~~----~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~-g~~~~~~l 253 (483)
..++.++++++.. .+++.+.+.|++.|+|.+...+.....+.+++| ++||++.|+...+.++|.++ +++..+++
T Consensus 101 ~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~ 179 (591)
T PTZ00207 101 FCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFF 179 (591)
T ss_pred HHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999988711 178999999999999999998999999999995 78999999999999999976 55555544
Q ss_pred hhccCchHHHHHHHHHHHHHHHHHHHhccCCCCCCC---C--CChhhHH------------------H------------
Q 011529 254 IHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDP---Q--LRPAEKK------------------L------------ 298 (483)
Q Consensus 254 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~------------------~------------ 298 (483)
. .+|+..|++.+++.++..++.+.+.++++.+.. + .+++++. .
T Consensus 180 ~--~~~~~~fl~l~vl~~vv~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~ 257 (591)
T PTZ00207 180 S--DNTSAYFFFLMSFALVVGILAIVFMRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIV 257 (591)
T ss_pred H--HhHHHHHHHHHHHHHHHHHHHHhheeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHH
Confidence 3 368888888888888877777666655542211 0 0111111 0
Q ss_pred -------------------------hh---------------------h-ccc-------------------------C-
Q 011529 299 -------------------------IV---------------------S-SCA-------------------------S- 305 (483)
Q Consensus 299 -------------------------~~---------------------~-~~~-------------------------~- 305 (483)
.. + ..+ +
T Consensus 258 yl~~~~~~~~~~~~~~~~~~~~~~v~~~lll~~p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (591)
T PTZ00207 258 FLPLQGALVAYLKLGSNFKVGFAVTVIVLTVIFPFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDVDY 337 (591)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCcCCCccccccccccccccccccccccccccccC
Confidence 00 0 000 0
Q ss_pred CCCCcccchhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcch--hhHHhHHHHHHHHHHHHHHHHHHHH
Q 011529 306 KEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTE--SGLFCVLPWLTMAFSANLGGWIADT 383 (483)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~i~~~~~g~l~dr 383 (483)
..+.....+.+.+++..+|.+++..++.......+...+..+.+..-|.+.+. ...+.++.++++.+|++..|.+...
T Consensus 338 ~~P~~~~t~~q~l~~~d~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~ 417 (591)
T PTZ00207 338 IAPQFQETFIEGLKTARLWCLLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIW 417 (591)
T ss_pred CCCCCcchHHHHHhchhHHHHHHHHHHhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHH
Confidence 00111125666778899999999999988888888888888888832763333 3337889999999999999998844
Q ss_pred Hhhc
Q 011529 384 LVSK 387 (483)
Q Consensus 384 ~g~~ 387 (483)
..+|
T Consensus 418 ~~~~ 421 (591)
T PTZ00207 418 SQKR 421 (591)
T ss_pred HHhh
Confidence 4443
No 95
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.87 E-value=3.6e-19 Score=178.07 Aligned_cols=347 Identities=14% Similarity=0.108 Sum_probs=208.3
Q ss_pred HHHHHHHHHHhhhhhhhHHhhhh-hhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhh-cCCchHHHHHHHHHHHHHH
Q 011529 107 VLCFSAFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADT-VGGKAVLGFGVVWWSIATA 184 (483)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~ 184 (483)
..++...+...+..+.+...++. +.+++|++..+.+++.+.+........+++|+++|| +|||+++.++.++.+++.+
T Consensus 24 ~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~ 103 (500)
T PRK09584 24 YLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYA 103 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHH
Confidence 34445555555555555555555 668899999999998888877777777899999999 5999999999999999988
Q ss_pred HhhhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcc--hhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHH
Q 011529 185 LTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAE--RSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSV 262 (483)
Q Consensus 185 ~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~--r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~ 262 (483)
++.+++. +.+.+++.+++.|++.|...+...+++.+++|+++ |..++++++.+.++|..+||.+++++.++.|||+.
T Consensus 104 l~~~~~~-~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~ 182 (500)
T PRK09584 104 LVAWSGH-DAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVA 182 (500)
T ss_pred HHHHhcc-cHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHH
Confidence 8877641 45667788999999999988999999999997643 45688999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHH---hccCCCCCCCCCChhhHHHh------------hhcccCCCCC------------------
Q 011529 263 FYSFGSLGTVWFTVWLS---KAHSSPAEDPQLRPAEKKLI------------VSSCASKEPV------------------ 309 (483)
Q Consensus 263 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~------------------ 309 (483)
|.+.++..++..+..+. ..++..++.+..+.+..... ......+.+.
T Consensus 183 F~i~~i~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (500)
T PRK09584 183 FALSVVGMLITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIVGVVALIAIATWLLHNQEIARMALGVVALGIVVIFGK 262 (500)
T ss_pred HHHHHHHHHHHHHHHHHhHHHhccCCCCCCccccchhhHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 99887655544332222 22222111110000000000 0000000000
Q ss_pred cccchhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHHHHHH--hCCCc------chhhHHhHHHHHHHHHHHHHHHHHH
Q 011529 310 KTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQV--LHFNL------TESGLFCVLPWLTMAFSANLGGWIA 381 (483)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~------~~~~~~~~~~~~~~~i~~~~~g~l~ 381 (483)
.....++.-+ ++.+.. +..++....++......+.++... .+.+. ...+++.++..+..++..++.+++-
T Consensus 263 ~~~~~~~~~~-~~~~~~-~~~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~ 340 (500)
T PRK09584 263 EAFAMKGAAR-RKMIVA-FILMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIY 340 (500)
T ss_pred HHhhcCHHHH-HHHHHH-HHHHHHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHH
Confidence 0000011111 222222 222233444455555555554431 11221 2256667777777777777777777
Q ss_pred HHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhcc-------chhHHHHHHHHHhhhhhhhhhchhhhhHhhhcc-Ccce
Q 011529 382 DTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHV-------DSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAP-RYSV 453 (483)
Q Consensus 382 dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g 453 (483)
+|.++|... ..+..+...+...++..+..... -+.++.+....+.........|...+...+..| +.+|
T Consensus 341 ~~l~~r~~~---~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg 417 (500)
T PRK09584 341 NKMGDRLPM---PHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMG 417 (500)
T ss_pred HHhCcCCCc---HHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHH
Confidence 777665321 12222222222222222211111 113344445555555556667777777777665 5699
Q ss_pred eeeeee
Q 011529 454 SIISIN 459 (483)
Q Consensus 454 ~~~g~~ 459 (483)
..+|..
T Consensus 418 ~~~g~~ 423 (500)
T PRK09584 418 FIMGSW 423 (500)
T ss_pred HHHHHH
Confidence 999844
No 96
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.85 E-value=2.5e-18 Score=168.44 Aligned_cols=353 Identities=14% Similarity=0.159 Sum_probs=214.1
Q ss_pred HHHHHHHHHHHhhhhhhhHHhhhh-hhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhc-CCchHHHHHHHHHHHHH
Q 011529 106 VVLCFSAFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTV-GGKAVLGFGVVWWSIAT 183 (483)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~ 183 (483)
+..++...+...+..+.+...+|. +.+++|+++.+.+.+.+.+.....++.+++|+++||+ |||+++.++.++..++.
T Consensus 11 l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~ 90 (493)
T PRK15462 11 IYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGH 90 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHH
Confidence 444444455555555556666666 5667899999999999999999999999999999999 99999999999999888
Q ss_pred HHhhhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCc--chhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchH
Q 011529 184 ALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVA--ERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPS 261 (483)
Q Consensus 184 ~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~--~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~ 261 (483)
+++..... +...+.+...+.++|.|...+...+++.|.+|++ +|.+++++.+...++|..++|.+.+++.+..||++
T Consensus 91 lll~~~~~-~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~ 169 (493)
T PRK15462 91 VVLGASEI-HPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAM 169 (493)
T ss_pred HHHHHhhc-chhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHH
Confidence 76654321 2233444444555666777777889999999875 69999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCC----CCCCCChhhHHH---------------hhhc-ccCCCCC------------
Q 011529 262 VFYSFGSLGTVWFTVWLSKAHSSPA----EDPQLRPAEKKL---------------IVSS-CASKEPV------------ 309 (483)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~---------------~~~~-~~~~~~~------------ 309 (483)
.|.+.++..++..+..+...+..++ ++++.++++... .... ...+...
T Consensus 170 ~F~iaaigm~l~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (493)
T PRK15462 170 GFGLAAVGMIAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLVLLVATPALITVLFWKEWSVYALIVATIIGLG 249 (493)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998776554444443332211111 011111110000 0000 0000000
Q ss_pred -----cccchhhhhcChh--HHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCC----cchhhHHhHHHHHHHHHHHHHHH
Q 011529 310 -----KTIPWGLILSKPP--VWALIVSHFCHNWGTFILLTWMPTYYNQVLHFN----LTESGLFCVLPWLTMAFSANLGG 378 (483)
Q Consensus 310 -----~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~----~~~~~~~~~~~~~~~~i~~~~~g 378 (483)
...+....-|+|- +..+.+...++...+....+.+..|.++..+.+ +...+++.++..+..++..++.+
T Consensus 250 ~~~~~~~~~~~~~er~r~~~~~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~ip~~~~qslNp~~ii~l~P~~a 329 (493)
T PRK15462 250 VLAKIYRKAENQKQRKELGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVNRDMFGYTVPTAMFQSINAFAVMLCGVFLA 329 (493)
T ss_pred HHHHHHHhcCCHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccchhcceeeCHHHHHhHhHHHHHHHHHHHH
Confidence 0000000011221 223333444444444555566666666642211 12356777888888888888877
Q ss_pred HHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhh----c---cchhHHHHHHHHHhhhhhhhhhchhhhhHhhhccC-
Q 011529 379 WIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLS----H---VDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPR- 450 (483)
Q Consensus 379 ~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 450 (483)
++-.|..+|+.-.....+..+...+...++..+... . ..++++++....+......+..|...+...+..|+
T Consensus 330 ~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~ 409 (493)
T PRK15462 330 WVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPG 409 (493)
T ss_pred HHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHH
Confidence 776676433211112223333333333333222211 1 12445556666666666777788888888888874
Q ss_pred cceeeeeee
Q 011529 451 YSVSIISIN 459 (483)
Q Consensus 451 ~~g~~~g~~ 459 (483)
.+|..+|..
T Consensus 410 ~~g~~mg~w 418 (493)
T PRK15462 410 VTGVLTGIY 418 (493)
T ss_pred HHHHHHHHH
Confidence 588888844
No 97
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.85 E-value=9.8e-19 Score=168.56 Aligned_cols=324 Identities=13% Similarity=0.106 Sum_probs=227.0
Q ss_pred HHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcC-CchHHHHHHHHHHHHHHHhhh
Q 011529 110 FSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVG-GKAVLGFGVVWWSIATALTPV 188 (483)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g-~r~~~~~~~~~~~~~~~~~~~ 188 (483)
...+++.+...+.+.|.++.+.++.|.|..|+|.+.++..+..++.++++|.++||.+ +|+++.+..++.++.......
T Consensus 8 s~~~f~~f~~~G~~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~ 87 (400)
T PF03825_consen 8 SLMYFLYFFAYGAFLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAF 87 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 4445666677777888899999999999999999999999999999999999999985 577777777777776666666
Q ss_pred hhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhh-HHHhhhccCc---hHHHH
Q 011529 189 AAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAF-SPFLIHRFGW---PSVFY 264 (483)
Q Consensus 189 ~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~-~~~l~~~~g~---~~~~~ 264 (483)
.+ +++.+++..++..+......|...++..+... +++.-.|.....+++|.+++... ++.+....++ ...++
T Consensus 88 ~~--~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (400)
T PF03825_consen 88 SS--SFWWLFVIMLLFSFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFY 163 (400)
T ss_pred hc--cHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHH
Confidence 66 88888888888888888888999999888874 55667888889999998888654 2333333332 34455
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChhHHHHHHHHHHHHHHHHHHHHhh
Q 011529 265 SFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWM 344 (483)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (483)
+.+...++.....+. .|+.+.+++..++.++. ...+..+++|+|+++...+..++.........++.
T Consensus 164 i~~~~~~ll~~~~l~-lp~~~~~~~~~~~~~~~------------~~~~~~~llk~~~~~~Fll~~~l~~~~~~~~~~f~ 230 (400)
T PF03825_consen 164 IAAILSLLLAGFALF-LPKTPPKRSAKESVKKL------------LGLDALKLLKNPRFLVFLLAAFLIGISHAAYYTFF 230 (400)
T ss_pred HHHHHHHHHHHHHHh-CCCCccccccCCCcccc------------cchHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 555544444333333 34433221111111100 01123468999999999999999999999999999
Q ss_pred HHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhcc-chhHHHH
Q 011529 345 PTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHV-DSPAMAV 423 (483)
Q Consensus 345 ~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 423 (483)
+.|+++..|.+....+.+.++..++.++..+..+++.+|+|.+ .++.++.+..++-+...... ++.+...
T Consensus 231 ~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~---------~ll~~a~~~~~vR~~l~a~~~~~~~~~~ 301 (400)
T PF03825_consen 231 SIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIK---------WLLLLALVAYAVRWLLYAYFSDPWPFIV 301 (400)
T ss_pred HHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH---------HHHHHHHHHHHHHHHHHHHhcCCcHHHH
Confidence 9999994337888888888888899999999999999999976 35555566666666555444 2322222
Q ss_pred HHHH----HhhhhhhhhhchhhhhHhhhcc-Ccceeeeeee
Q 011529 424 LCMA----CSQGTDAFSQSGLYSNHQDIAP-RYSVSIISIN 459 (483)
Q Consensus 424 ~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~ 459 (483)
.... +-+...+........+..+..| +.++++.++.
T Consensus 302 ~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~ 342 (400)
T PF03825_consen 302 ALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLY 342 (400)
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHH
Confidence 2222 2333344445556666666555 5577777744
No 98
>PRK09669 putative symporter YagG; Provisional
Probab=99.84 E-value=1.2e-18 Score=172.89 Aligned_cols=252 Identities=13% Similarity=0.060 Sum_probs=174.6
Q ss_pred hhhHHh-hhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhh----cCCc-hHHHHHHHHHHHHHHHhhhhhcc--
Q 011529 121 VNMSIA-ILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADT----VGGK-AVLGFGVVWWSIATALTPVAAKL-- 192 (483)
Q Consensus 121 ~~~~~~-~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr----~g~r-~~~~~~~~~~~~~~~~~~~~~~~-- 192 (483)
..+..+ ...+.+++|+++.++|.+.++..+...+..|+.|+++|| +||| +.++.+.+..+++.++....+..
T Consensus 26 ~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~ 105 (444)
T PRK09669 26 QTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGA 105 (444)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCc
Confidence 333433 445888899999999999999999999999999999998 6774 55666777777776655444411
Q ss_pred --cHHHHHHHHHHHhhhhhcchhHHHHHHhhhc-CCcchhHHHHHHHHHHHhHHHHHHhhHHHhhh-------ccCchHH
Q 011529 193 --GLPFLLVVRVFMGIGEGVAMPAMNNILSKWV-PVAERSRSLALVYSGMYLGSVTGLAFSPFLIH-------RFGWPSV 262 (483)
Q Consensus 193 --~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-------~~g~~~~ 262 (483)
.++.+++..++.+.+.........++.+|+. ++++|.+..++......+|..+++.+...+.. ..+|+..
T Consensus 106 ~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~ 185 (444)
T PRK09669 106 TGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYA 185 (444)
T ss_pred chHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHH
Confidence 2455666666777777777778889999988 45889999999998888988888766554433 2467777
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChhHHHHHHHHHHHHHHHHHHHH
Q 011529 263 FYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLT 342 (483)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (483)
+.+.+++.++..+..++..+|+.+++++.+ ......++.++|||.++.+.+..++..........
T Consensus 186 ~~i~~ii~~v~~~~~~~~~~e~~~~~~~~~---------------~~~~~~~~~~~~n~~~~~l~~~~~~~~~~~~~~~~ 250 (444)
T PRK09669 186 MMVMGLLGVVLFFCCFFMTKERYTPEVDNS---------------SSVWKDLKLLLGNSQWRIMFIFNVVLLTAVVTRGG 250 (444)
T ss_pred HHHHHHHHHHHHHHHhCCeEEecCCCCcCC---------------CCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhh
Confidence 777777776665555544444322111000 00123466788999999888777776666655555
Q ss_pred hhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcC
Q 011529 343 WMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKG 388 (483)
Q Consensus 343 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~ 388 (483)
..++|.+...+ ++...+.+.....+..+++.++.+++.||+|+|+
T Consensus 251 ~~~y~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~ 295 (444)
T PRK09669 251 ATLYYVNYVLL-RPDLATLFLVTGMIAGLFGALLSERLLGKFDRVR 295 (444)
T ss_pred hhheeeeeecC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHH
Confidence 55555554333 3334445555566778888999999999999884
No 99
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.83 E-value=6.2e-19 Score=174.04 Aligned_cols=253 Identities=17% Similarity=0.224 Sum_probs=197.9
Q ss_pred HhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHh----hcCCchH-HHHHHHHHHHHHHHhhhh-h-cc----c
Q 011529 125 IAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWAD----TVGGKAV-LGFGVVWWSIATALTPVA-A-KL----G 193 (483)
Q Consensus 125 ~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d----r~g~r~~-~~~~~~~~~~~~~~~~~~-~-~~----~ 193 (483)
...+.+.+.+|+++..+|.+..+..+..++..|+.|.++| |+||||. ++++.+..+++.+++... + .. .
T Consensus 23 ~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~ 102 (428)
T PF13347_consen 23 YLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAK 102 (428)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhH
Confidence 3355578888999999999999999999999999999999 7897665 567888888888777655 3 11 2
Q ss_pred HHHHHHHHHHHhhhhhcchhHHHHHHhhhcC-CcchhHHHHHHHHHHHhHHHHHHhhHHHhhhcc-------CchHHHHH
Q 011529 194 LPFLLVVRVFMGIGEGVAMPAMNNILSKWVP-VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF-------GWPSVFYS 265 (483)
Q Consensus 194 ~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-------g~~~~~~~ 265 (483)
...+.+..++..++.........++..|+.+ +++|.+..++.+.+..+|..+...+.+.+.+.. +|++...+
T Consensus 103 ~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v 182 (428)
T PF13347_consen 103 LVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALV 182 (428)
T ss_pred HHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHH
Confidence 2345677777799999999999999999997 478999999999999999987777766665432 58888888
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChhHHHHHHHHHHHHHHHHHHHHhhH
Q 011529 266 FGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMP 345 (483)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (483)
.+++.++..++..+..+|++++.++.++ +......++.+++||.++.+.+..++............+
T Consensus 183 ~~iv~~v~~~i~~~~~ke~~~~~~~~~~-------------~~~~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~ 249 (428)
T PF13347_consen 183 LAIVGLVFFLITFFFVKERSVEVTEQEK-------------KISLRDSLRSLFRNRPFRILLLAFFLQWLAFALMNTFLP 249 (428)
T ss_pred HHHHHHHHhhhhhheeeecccccccccc-------------ccccccchhhhcccchHHHHHHHHHHHHhhhhhhhhHHH
Confidence 8888888777777766662111111110 111133577889999999999999999899988888999
Q ss_pred HHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcCCch
Q 011529 346 TYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSV 391 (483)
Q Consensus 346 ~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~~~~ 391 (483)
+|.++..|.+ ...+.+.....++.+++.++.+++.||+|+|+...
T Consensus 250 y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~ 294 (428)
T PF13347_consen 250 YYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYI 294 (428)
T ss_pred HHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehh
Confidence 9999988866 56677778888999999999999999999997543
No 100
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.83 E-value=2.1e-17 Score=161.30 Aligned_cols=267 Identities=14% Similarity=0.084 Sum_probs=186.3
Q ss_pred HHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHh----hcCCchHHHHH-HHHHHHHHHHhhh
Q 011529 114 LLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWAD----TVGGKAVLGFG-VVWWSIATALTPV 188 (483)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d----r~g~r~~~~~~-~~~~~~~~~~~~~ 188 (483)
+-..+......+.++.+.+++|.+..+.+++..+..+...+.+|+.|+++| |+|||+.++++ .+...++.+++++
T Consensus 14 ~Giq~~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~ 93 (477)
T TIGR01301 14 AGVQFGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGF 93 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHh
Confidence 333455666667777788999999999999999999999999999999999 59999998764 5666666666666
Q ss_pred hhcccH-----------------HHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcch--hHHHHHHHHHHHhHHHHHHhh
Q 011529 189 AAKLGL-----------------PFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAER--SRSLALVYSGMYLGSVTGLAF 249 (483)
Q Consensus 189 ~~~~~~-----------------~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r--~~~~~~~~~~~~~g~~~g~~~ 249 (483)
++ +. +..+++..+..++.....+...++++|.+|+++| +.++++.+.+.++|.++|+.+
T Consensus 94 ~~--~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~ 171 (477)
T TIGR01301 94 AA--DIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAA 171 (477)
T ss_pred Cc--hhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 54 32 2334444455667788888899999999998765 689999999999999999999
Q ss_pred HHHh--hhcc-------------CchHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccch
Q 011529 250 SPFL--IHRF-------------GWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPW 314 (483)
Q Consensus 250 ~~~l--~~~~-------------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (483)
+++. .+.+ +.+..|++.+++.++..++..+..+|.+...++..++++ . .+.++......+
T Consensus 172 g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~~--~---~~~~~~~~~~~~ 246 (477)
T TIGR01301 172 GAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFINSE--A---APPSKHGEEAFF 246 (477)
T ss_pred HHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchhhh--c---ccccccchhhhH
Confidence 9875 2211 568889998888888877777777775432211110000 0 000000111123
Q ss_pred hhhhc-----ChhHHHHHHHHHHHHHHHHHHHHhhHHHHHH-HhCCCcch----------hhHHhHHHHHHHHHHHHHHH
Q 011529 315 GLILS-----KPPVWALIVSHFCHNWGTFILLTWMPTYYNQ-VLHFNLTE----------SGLFCVLPWLTMAFSANLGG 378 (483)
Q Consensus 315 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~----------~~~~~~~~~~~~~i~~~~~g 378 (483)
+++++ .|.++.+++..++..++.+.+..|.+.|..+ .++-++.. ..+....+.+...+.+++..
T Consensus 247 ~~i~~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~ 326 (477)
T TIGR01301 247 GELFGAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGME 326 (477)
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33332 4678999999999999999999999888775 45433211 12333444555567777888
Q ss_pred HHHHHHhhc
Q 011529 379 WIADTLVSK 387 (483)
Q Consensus 379 ~l~dr~g~~ 387 (483)
++.+|+|+|
T Consensus 327 ~l~~~~g~~ 335 (477)
T TIGR01301 327 KLCRGWGAG 335 (477)
T ss_pred HHHHHhccc
Confidence 899999853
No 101
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.82 E-value=1.1e-17 Score=155.23 Aligned_cols=282 Identities=14% Similarity=0.124 Sum_probs=219.1
Q ss_pred ccccCChhHHHHHHHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHH
Q 011529 95 WWEEFPKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGF 174 (483)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~ 174 (483)
..+-.++||.+++++.+..+.+.+.+..+++........+| +....-|...+|++.+....+.+-|+.||+|-|....+
T Consensus 36 ~~rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~ll 114 (480)
T KOG2563|consen 36 GHRVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLL 114 (480)
T ss_pred ccccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHH
Confidence 34567789999999888888888888888888777888888 88888999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhcc----cHH--HHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHh
Q 011529 175 GVVWWSIATALTPVAAKL----GLP--FLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLA 248 (483)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~----~~~--~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 248 (483)
+..+.+++..+-..+... .++ ....+..+.+.+.-........+..-|+++++|..+..+-.++..+|.++|.+
T Consensus 115 gt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~l 194 (480)
T KOG2563|consen 115 GTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFL 194 (480)
T ss_pred HHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhh
Confidence 999999999876554321 344 67788888888887777777788889999999999999999999999999988
Q ss_pred hHHHhhhcc------CchH--HHHHHHHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcC
Q 011529 249 FSPFLIHRF------GWPS--VFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSK 320 (483)
Q Consensus 249 ~~~~l~~~~------g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (483)
+...+..+- .|.. .|+..+++..+.+++..+..+++|+........... +..-..+.+..++|
T Consensus 195 lppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~~~~---------~~~f~~si~~~~~n 265 (480)
T KOG2563|consen 195 LPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQAALQ---------DASFPKSIKSCFKN 265 (480)
T ss_pred ccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHhhhh---------cCcHHHHHHHHHcC
Confidence 888877643 2443 344445555544455555555544433322221111 01123457788999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhc
Q 011529 321 PPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSK 387 (483)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~ 387 (483)
+++..+.+.+.+....+++..+.+-.-+.. .|.+...+|.......+++++++++.|.+.||.++-
T Consensus 266 ~~F~il~~~ygi~~g~F~~l~~~l~~~l~~-sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~f 331 (480)
T KOG2563|consen 266 RQFIILAICYGIGLGLFNSLSTLLNLALCP-SGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKF 331 (480)
T ss_pred ccHHHHHHHHhhhHHHHHHHHHHhhhcccc-ccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhH
Confidence 999999888888888888887777666655 578888999999999999999999999999998765
No 102
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.82 E-value=7e-18 Score=168.47 Aligned_cols=268 Identities=12% Similarity=0.037 Sum_probs=183.1
Q ss_pred HHHHHHhhhhhhhHHhhhh-hhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHh----hcCC-chHHHHHHHHHHHHHH
Q 011529 111 SAFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWAD----TVGG-KAVLGFGVVWWSIATA 184 (483)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d----r~g~-r~~~~~~~~~~~~~~~ 184 (483)
++.+...+....+..+++. +.+.+|+++..+|.+..+..+..++..|+.|.++| |+|| |+.++++.+..+++..
T Consensus 13 ~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~ 92 (473)
T PRK10429 13 FGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLF 92 (473)
T ss_pred cchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHH
Confidence 3444444555555555444 67778999999999999999999999999999999 5698 5566778777777766
Q ss_pred Hhhhhhcc--c--HHHHHHHHHHHhhhhhcchhHHHHHHhhhc-CCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhc---
Q 011529 185 LTPVAAKL--G--LPFLLVVRVFMGIGEGVAMPAMNNILSKWV-PVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR--- 256 (483)
Q Consensus 185 ~~~~~~~~--~--~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~--- 256 (483)
++...+.. + ++.+++..++.+++.........++..|+. ++++|.+..++...+.++|..+.+.+...+.+.
T Consensus 93 llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~ 172 (473)
T PRK10429 93 LLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGG 172 (473)
T ss_pred HHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 65443311 1 334556667778888888888999999998 589999999998888888877766555443322
Q ss_pred ----cCchHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChhHHHHHHHHHH
Q 011529 257 ----FGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFC 332 (483)
Q Consensus 257 ----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (483)
.+|+....+.+++.++..+..++..+|++.+.....+++ ++......++.+++||.++.+++..++
T Consensus 173 ~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~----------~~~~~~~~~~~~~~n~~~~~ll~~~~~ 242 (473)
T PRK10429 173 GDRGFGFQMFTLVLIAFFIVSTIITLRNVHEVYSSDNQVSAEG----------SHLTLKDIVALIYKNDQLSCLLGMALA 242 (473)
T ss_pred CchhhhHHHHHHHHHHHHHHHHHHHHcCceecCCccccccccc----------cCCCHHHHHHHHhcCHHHHHHHHHHHH
Confidence 245656566666655555454444444321111000000 001112235567789999888888888
Q ss_pred HHHHHHHHHHhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 011529 333 HNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGL 389 (483)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~~ 389 (483)
..........+.++|.+...+ +....+.+.....++.+++.++.+++.||+|+|+.
T Consensus 243 ~~~~~~~~~~~~~y~~~y~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~ 298 (473)
T PRK10429 243 YNIASNIINGFAIYYFTYVIG-DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRIL 298 (473)
T ss_pred HHHHHHHHhhheeeEEEEECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHH
Confidence 887777777777766665433 55566677777778889999999999999998853
No 103
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.81 E-value=3.2e-17 Score=155.09 Aligned_cols=330 Identities=10% Similarity=0.025 Sum_probs=211.6
Q ss_pred HHHHHHHHHHhhhhhhhHHhhhhhhh-hcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHH--HHH
Q 011529 107 VLCFSAFLLCNMDRVNMSIAILPMSA-EFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWS--IAT 183 (483)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~--~~~ 183 (483)
......++..++..+...++.+.+.+ +.|+|.+++|.+.++..+...+.+|+.|.++||+|.||-++....+.. .+.
T Consensus 10 ~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~p 89 (412)
T PF01306_consen 10 WWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGP 89 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHH
Confidence 33444555555667777888888665 589999999999999999999999999999999997765543332221 122
Q ss_pred -HHhhhhhc--ccHH-HHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCc
Q 011529 184 -ALTPVAAK--LGLP-FLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGW 259 (483)
Q Consensus 184 -~~~~~~~~--~~~~-~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~ 259 (483)
+...+.+. .|.+ ..+++.+..|++.....|+..+++.+.. ++.+.-.|-..+++++|.+++..++|.+.+ .+-
T Consensus 90 ff~~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L~~-i~p 166 (412)
T PF01306_consen 90 FFIYVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGILFN-INP 166 (412)
T ss_dssp HHHHTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHHHH-HHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhheeee-eCc
Confidence 22122220 1332 3334445556666666777788777764 556777889999999999999999999987 466
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChhHHHHHHHHHHHHHHHHH
Q 011529 260 PSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFI 339 (483)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (483)
+..|++.....++..++.+..+++.+++.+..+....+ +++....+..+++|+|++|.+.+........+..
T Consensus 167 ~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~l~k~~~fw~~~l~v~g~~~~Y~v 238 (412)
T PF01306_consen 167 NIIFWIASAAAIILLLLLLLLKPDVPPQAEVADALGAK--------KDKVSLKDVLSLFKMRNFWFFVLFVIGVAAIYDV 238 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHSS---SSSSS-SSTTSSS--------------HHHHHHHTTSHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHcCCcCchhhhhhcccccC--------CCCCcHHHHHHHhcchhHHHHHHHHHHHHHHHHH
Confidence 77888776666655555555444433222111111000 0011122355789999999998888888888888
Q ss_pred HHHhhHHHHHHHhC---CCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhcc
Q 011529 340 LLTWMPTYYNQVLH---FNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHV 416 (483)
Q Consensus 340 ~~~~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (483)
+....+.|+...+. .+....|.+.++..+..++...+.+++.+|+|.|+ .+.++..+..+-+......
T Consensus 239 fdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~---------~Lllag~i~~iRi~~~~~~ 309 (412)
T PF01306_consen 239 FDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKN---------LLLLAGVIMAIRIIGSGFA 309 (412)
T ss_dssp HHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH---------HHHHHHHHHHHHHHHHHT-
T ss_pred HHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHh---------HHHHHHHHHHHHHHHHhhh
Confidence 88888888886332 34466889999999999999999999999999884 3344445566666666667
Q ss_pred chhHHHHHHHHHhhhhhhhhhchhhhhHhhhccC-cceeee
Q 011529 417 DSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPR-YSVSII 456 (483)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~ 456 (483)
++++.....-.+-............-+..+..++ ..++..
T Consensus 310 ~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y 350 (412)
T PF01306_consen 310 TNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLY 350 (412)
T ss_dssp -SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHH
Confidence 7777766666665555555555555566665543 334433
No 104
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.81 E-value=1e-17 Score=169.79 Aligned_cols=247 Identities=17% Similarity=0.123 Sum_probs=177.9
Q ss_pred hhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhcccHHHHHHHHHHHhhhhhc
Q 011529 131 SAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGV 210 (483)
Q Consensus 131 ~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~ 210 (483)
.+.+..+.....+..+++.+|..+|.+++|+++||+|||++++++.++..++.+..++++ |++.+++.|++.|++.+.
T Consensus 110 ~~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~--~~~~~~~~Rfl~G~~~~~ 187 (521)
T KOG0255|consen 110 WNLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAP--NYWMFLIFRFLSGFFGSG 187 (521)
T ss_pred hceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhC--cHHHHHHHHHHHHhhccc
Confidence 455677888999999999999999999999999999999999999999999999999999 999999999999999999
Q ss_pred chhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHHHHHHhccCCCCCC--
Q 011529 211 AMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAED-- 288 (483)
Q Consensus 211 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 288 (483)
.......++.|++++++|+.+..+ ......++.+++..++++.. +||+.+++..+..++..+. +++.++.++-.
T Consensus 188 ~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~~Es~rwl~~ 263 (521)
T KOG0255|consen 188 PLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL-WFLPPESPRWLLS 263 (521)
T ss_pred hhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH-HHccCcChHHHHH
Confidence 999999999999999999999999 88888888888888888887 8999999999888877666 44444544311
Q ss_pred -CCCChhhHHHhh---------------------hcccCCCCCcccchhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHH
Q 011529 289 -PQLRPAEKKLIV---------------------SSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPT 346 (483)
Q Consensus 289 -~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (483)
.+.++..+.... ...+.....+...+.++++.|++....+...+..+.......-++.
T Consensus 264 ~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~y~gl~~ 343 (521)
T KOG0255|consen 264 KGRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVFSLVYYGLSL 343 (521)
T ss_pred cCchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHHHhHHHHhhhh
Confidence 110000000000 0000001112234667777776554444444444333333333333
Q ss_pred HHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhc
Q 011529 347 YYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSK 387 (483)
Q Consensus 347 ~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~ 387 (483)
.... +|.+. .......+.....+....+...|+.|||
T Consensus 344 ~~~~-lg~~~---~~~~~~~~~~~~p~~~~~~~~~~~~gR~ 380 (521)
T KOG0255|consen 344 NVSG-LGGNI---YLNFTLSGLVELPAYFRNGLLLPEFGRR 380 (521)
T ss_pred hhhh-cCchH---HHHHHHHHHHHhhHHHHHHHHHHHhCcH
Confidence 3332 44332 3444445557777777888999999877
No 105
>PRK11462 putative transporter; Provisional
Probab=99.81 E-value=9e-17 Score=159.38 Aligned_cols=261 Identities=10% Similarity=-0.007 Sum_probs=183.4
Q ss_pred HHHHHHhhhhhhhHHh-hhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhh----cCCchH-HHHHHHHHHHHHH
Q 011529 111 SAFLLCNMDRVNMSIA-ILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADT----VGGKAV-LGFGVVWWSIATA 184 (483)
Q Consensus 111 ~~~~~~~~~~~~~~~~-~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr----~g~r~~-~~~~~~~~~~~~~ 184 (483)
++.+.........+.+ +..+.+..|+++..+|.+..+.-+..++..|+.|.++|| +||||. ++++.+..+++.+
T Consensus 16 ~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~ 95 (460)
T PRK11462 16 MGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCV 95 (460)
T ss_pred cchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHH
Confidence 3333334444444444 344778899999999999999999999999999999996 687655 5667777777777
Q ss_pred Hhhhhhccc----HHHHHHHHHHHhhhhhcchhHHHHHHhhhcC-CcchhHHHHHHHHHHHhHHHHHHhhHHHhhhcc--
Q 011529 185 LTPVAAKLG----LPFLLVVRVFMGIGEGVAMPAMNNILSKWVP-VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF-- 257 (483)
Q Consensus 185 ~~~~~~~~~----~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-- 257 (483)
++...+..+ ...+++..++..++.........++.+|+.+ ++||.+..++...+..+|..+++.+...+....
T Consensus 96 llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~ 175 (460)
T PRK11462 96 LAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGG 175 (460)
T ss_pred HHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 665544211 3456666777788888888888999999987 689999999999999999888887766555433
Q ss_pred -----CchHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChhHHHHHHHHHH
Q 011529 258 -----GWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFC 332 (483)
Q Consensus 258 -----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (483)
+|+....+.+++.+++..+.+...+|+++++++.. . .+..++..++||.++.+....++
T Consensus 176 ~~~~~g~~~~~~i~~ii~~i~~~i~~~~~kE~~~~~~~~~-~---------------~~~~l~~~~~Nk~~~~l~~~~~~ 239 (460)
T PRK11462 176 DNKPLGFQGGIAVLSVVAFMMLAFCFFTTKERVEAPPTTT-S---------------MREDLRDIWQNDQWRIVGLLTIF 239 (460)
T ss_pred CchhhhHHHHHHHHHHHHHHHHHHHHhcceeccCCCccCC-C---------------HHHHHHHHhCChHHHHHHHHHHH
Confidence 46666666666666655555444444322111100 0 01235678889998877777666
Q ss_pred HHHHHHHHHHhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcC
Q 011529 333 HNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKG 388 (483)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~ 388 (483)
.............+|.+...|. +...+.+.....++.+++.++++++.||+++|+
T Consensus 240 ~~~~~~~~~~~~~y~~~y~~g~-~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~ 294 (460)
T PRK11462 240 NILAVCVRGGAMMYYVTWILGT-PEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVT 294 (460)
T ss_pred HHHHHHHHHhHhhhhhhhhcCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHH
Confidence 6666666666666666665553 344556677778888999999999999999874
No 106
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.80 E-value=8.7e-18 Score=157.51 Aligned_cols=243 Identities=10% Similarity=0.023 Sum_probs=169.4
Q ss_pred cHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhc----------------
Q 011529 193 GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR---------------- 256 (483)
Q Consensus 193 ~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~---------------- 256 (483)
+++.+++..++.|.|.+...+..+.++++..++|++++.+++.+.+.++|..++|.+++.+...
T Consensus 9 ~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~~~ 88 (310)
T TIGR01272 9 YYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANAEA 88 (310)
T ss_pred HHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhHHH
Confidence 7899999999999999999999999999999999999999999999999999999999988732
Q ss_pred cCchHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChhHHHHHHHHHHHHHH
Q 011529 257 FGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWG 336 (483)
Q Consensus 257 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (483)
.+|+++|++.+.+.++..+.+.+...++.+++ + +++..+ ++ ....+..+++|.++...+..+++...
T Consensus 89 ~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~~-~-~~~~~~--------~~---~~~~~~~~~~~~~~l~~~~~f~yvg~ 155 (310)
T TIGR01272 89 AKVHTPYLLLAGALAVLAIIFAFLPLPELQEA-D-VARVSS--------GD---TTQKTSAFQFTHLVLGALGIFVYVGA 155 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCCCcc-c-cccccc--------cc---ccchhhHHhhHHHHHHHHHHHHHHHH
Confidence 36899999777766655554443322111111 1 000000 00 01123467888888888888888889
Q ss_pred HHHHHHhhHHHHHHH--hCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhh
Q 011529 337 TFILLTWMPTYYNQV--LHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLS 414 (483)
Q Consensus 337 ~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (483)
+.++..|++.|+++. +|+++.+.+...+.+..+.++|+++.+++.||+++++... . +..+.........
T Consensus 156 e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~-------~--~~~l~~~~~~l~~ 226 (310)
T TIGR01272 156 EVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLA-------F--NAFLAVLLSIGAA 226 (310)
T ss_pred HHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHH-------H--HHHHHHHHHHHHH
Confidence 999999999999864 5899999999999999999999999999999999774221 1 1111111111111
Q ss_pred ccchhHHHHHHHHHhhhhhhhhhchhhhhHhhhccCcceeeeee
Q 011529 415 HVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSVSIISI 458 (483)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 458 (483)
..+......... +.+.+.+...|...+...+..+++.+++.++
T Consensus 227 ~~~~~~~~~~~~-l~g~~~s~i~P~~~s~a~~~~~~~~~~asai 269 (310)
T TIGR01272 227 LTHGYVAMWFVL-ALGLFNSIMFPTIFSLALNALGRHTSQGSGI 269 (310)
T ss_pred HcCCHHHHHHHH-HHHHHHHHHHHHHHHHHHhhhhhhhhhhHHH
Confidence 112222222222 3334455566666766666666665555554
No 107
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.80 E-value=4.6e-17 Score=155.42 Aligned_cols=323 Identities=15% Similarity=0.098 Sum_probs=233.4
Q ss_pred HHHHHHHHHhhhhhhhHHhhhh-hhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhh----cCCch-HHHHHHHHHHH
Q 011529 108 LCFSAFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADT----VGGKA-VLGFGVVWWSI 181 (483)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr----~g~r~-~~~~~~~~~~~ 181 (483)
.-.++.+...........++.. +.+.+|+++..+|.+..+.-+..++..|+.|.+.|| +||+| .++++.+..++
T Consensus 16 ~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i 95 (467)
T COG2211 16 GYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAI 95 (467)
T ss_pred hhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHH
Confidence 3344445555555555555555 778899999999999999999999999999999996 67654 57778788888
Q ss_pred HHHHhhhhhc----ccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcC-CcchhHHHHHHHHHHHhHHHHHHhhHHHhhh-
Q 011529 182 ATALTPVAAK----LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVP-VAERSRSLALVYSGMYLGSVTGLAFSPFLIH- 255 (483)
Q Consensus 182 ~~~~~~~~~~----~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~- 255 (483)
.+.++..+++ .+....++..++.+++.........++.+++.+ ++||.+..++...+..+|..+...+.+.+..
T Consensus 96 ~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~ 175 (467)
T COG2211 96 VAVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKL 175 (467)
T ss_pred HHHHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888877763 245667788899999999999999999999986 5899999999999999998877766665553
Q ss_pred ------ccCchHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChhHHHHHHH
Q 011529 256 ------RFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVS 329 (483)
Q Consensus 256 ------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (483)
..||+....+.+++.++..+.+++..+|+..+..+.++..+. +.+..+..+++||.+...++.
T Consensus 176 ~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~~~~~-----------~~~~~~~~~~~Nrp~~~~l~~ 244 (467)
T COG2211 176 FGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVVETQPTKTGVKL-----------KLKDSFLLIFKNRPLLLLLLM 244 (467)
T ss_pred hCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccCcccccc-----------cHHHHHHHHHccchHHHHHHH
Confidence 346888888888888888888877777665433322210110 001234467899999999998
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHH
Q 011529 330 HFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFF 409 (483)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~ 409 (483)
.++...+.+...+...+|.+...|.+.............+.+++.++..++.+|+|+|+.. .....+...+..
T Consensus 245 ~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~-------~~~~~~~~i~~~ 317 (467)
T COG2211 245 NLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLF-------LIGLLLLAVGYL 317 (467)
T ss_pred HHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHH-------HHHHHHHHHHHH
Confidence 8888888888888999999988888888888888888888888899999999999999532 222222222222
Q ss_pred HHHhhccchhHHHHHHHHHhhhhhhhhhchhhhhHhhhc
Q 011529 410 LTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIA 448 (483)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (483)
...+...++....++..++.....+...+..++.+.|..
T Consensus 318 ~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~v 356 (467)
T COG2211 318 LLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTV 356 (467)
T ss_pred HHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchh
Confidence 333333444444454445555555555555666665543
No 108
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.80 E-value=1.5e-19 Score=156.56 Aligned_cols=278 Identities=17% Similarity=0.157 Sum_probs=198.3
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhh-cCCchHHHHHHHHH
Q 011529 101 KRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADT-VGGKAVLGFGVVWW 179 (483)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~ 179 (483)
+|...+...++..|-.++.....+.....+..+.+++.++..++.++|.....+.++++|++.|| +|-|.--++-+.+.
T Consensus 41 hr~m~lv~mc~lgfgsyfcyd~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv 120 (459)
T KOG4686|consen 41 HRFMALVFMCLLGFGSYFCYDAPGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFV 120 (459)
T ss_pred hHHHHHHHHHHhcccceeecCCchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHH
Confidence 44455555555556666666666666777888889999999999999999999999999999997 67776666666666
Q ss_pred HHHHHHhh---hhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhc
Q 011529 180 SIATALTP---VAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR 256 (483)
Q Consensus 180 ~~~~~~~~---~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 256 (483)
.++-++++ ..+ .+|.++.+|++.|+|.-....+.++++..|++.|+.+.++|+......+|..+--.+.+++.+.
T Consensus 121 ~~GqliFa~Ggi~~--aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~ 198 (459)
T KOG4686|consen 121 FLGQLIFAAGGISH--AFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDT 198 (459)
T ss_pred HHHHHHHHhchHHH--HHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHH
Confidence 66666554 345 7899999999999998888888899999999999999999999999999999888888888775
Q ss_pred cCc------hHHHH---HHHHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChhHHHHH
Q 011529 257 FGW------PSVFY---SFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALI 327 (483)
Q Consensus 257 ~g~------~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (483)
.+- +.... ..+...+..........--. .+..+.....++....+..+..+.+. -.|.+|.+.
T Consensus 199 ~~~~~~~~ghT~LG~~l~~~~~tc~~slical~lg~~------D~rAerilh~e~g~~Ge~pkLtdv~~--f~ppfw~~~ 270 (459)
T KOG4686|consen 199 MGRMFPGVGHTLLGLWLCFEVKTCKQSLICALSLGLS------DDRAERILHLEEGFLGEEPKLTDVNT--FYPPFWVLV 270 (459)
T ss_pred HHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHhhhh------hhHHHHHHhhhcCcccCCcccccccc--cCccHHHHH
Confidence 431 11111 11111111111111110000 00000000000000001101111111 257899999
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcC
Q 011529 328 VSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKG 388 (483)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~ 388 (483)
++.+++..+...+.+.-|.++++++|+++..++-+.+......++...+.|.++||.|++-
T Consensus 271 iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~ 331 (459)
T KOG4686|consen 271 IICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNL 331 (459)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhccee
Confidence 9999999999999999999999999999999999999998889999999999999999883
No 109
>PRK09848 glucuronide transporter; Provisional
Probab=99.79 E-value=7.8e-17 Score=160.18 Aligned_cols=262 Identities=14% Similarity=0.049 Sum_probs=164.4
Q ss_pred HHHHHHhhhhhhhHHh-hhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhc----CCchHH-HHHHHHHHHHHH
Q 011529 111 SAFLLCNMDRVNMSIA-ILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTV----GGKAVL-GFGVVWWSIATA 184 (483)
Q Consensus 111 ~~~~~~~~~~~~~~~~-~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~----g~r~~~-~~~~~~~~~~~~ 184 (483)
++.+..........++ .+++.+.+|+++.++|.+.++..+..++..++.|+++||. |||+.. .++.+...+..+
T Consensus 15 ~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~ 94 (448)
T PRK09848 15 LGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSV 94 (448)
T ss_pred cchHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHH
Confidence 3444444444444444 3457777899999999999999999999999999999996 666644 555554444443
Q ss_pred Hhh-hh----hcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCC-cchhHHHHHHHHHHH-----hHHHHHHhhHHHh
Q 011529 185 LTP-VA----AKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPV-AERSRSLALVYSGMY-----LGSVTGLAFSPFL 253 (483)
Q Consensus 185 ~~~-~~----~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~-----~g~~~g~~~~~~l 253 (483)
+.. .. +....+..++..++.+++.+...+...++..++..+ ++|.+..++...+.+ ++..++|.+.+..
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~ 174 (448)
T PRK09848 95 LVFWVPTDWSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSS 174 (448)
T ss_pred HHHhCcCCCCcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 322 11 101223345556677888888887778877776654 678887777655433 4455556555433
Q ss_pred hhcc--CchHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChhHHHHHHHHH
Q 011529 254 IHRF--GWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHF 331 (483)
Q Consensus 254 ~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (483)
.... +|.....+.+++.++..++.....+|+.+++.+. +.....++.++|||.++...+..+
T Consensus 175 g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~e~~~~~~~~----------------~~~~~~~~~l~~n~~f~~~~~~~~ 238 (448)
T PRK09848 175 PEEMVSVYHFWTIVLAIAGMVLYFICFKSTRENVVRIVAQ----------------PSLKISLQTLKRNRPLFMLCIGAL 238 (448)
T ss_pred CCchhhhHHHHHHHHHHHHHHHHHHHHcCcEeccCCCccC----------------CCHHHHHHHHhCCchHHHHHHHHH
Confidence 2111 1211112222232222222222223321111100 001223667899999999988888
Q ss_pred HHHHHHHHHHHhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcC
Q 011529 332 CHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKG 388 (483)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~ 388 (483)
+............|.|+++.+|.++...++......++.+++.++.+++.||+++|+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~ 295 (448)
T PRK09848 239 CVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKN 295 (448)
T ss_pred HHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHH
Confidence 888888888888888888888877665555555446677889999999999999874
No 110
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.78 E-value=1.2e-19 Score=167.95 Aligned_cols=353 Identities=15% Similarity=0.147 Sum_probs=225.3
Q ss_pred cCChhHHHHHHHHHHHHHHhhhhhhhHHhhhhhhhhc-C-------CChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCc
Q 011529 98 EFPKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEF-N-------WNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGK 169 (483)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g-------~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r 169 (483)
..+++.+.+.+..++.+...++...++...+.+...+ | +++...+.+..+..++.+++++++|++.||+|||
T Consensus 35 ~qw~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK 114 (538)
T KOG0252|consen 35 LQWKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRK 114 (538)
T ss_pred hhHHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcch
Confidence 3456777888888999999999999998888766543 2 4556778899999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhhhhhcc-----cHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHH
Q 011529 170 AVLGFGVVWWSIATALTPVAAKL-----GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSV 244 (483)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ 244 (483)
+++...++++.++++++++.... -.+++...|++.|+|.|+-+|...+..+|...+++||...+..-++..+|..
T Consensus 115 ~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~Gil 194 (538)
T KOG0252|consen 115 KVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGIL 194 (538)
T ss_pred hhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHh
Confidence 99999999999999877665321 2467889999999999999999999999999999999999998888888888
Q ss_pred HHHhhHHHhhhc-------------c--CchHHHHHHHHHHHHHHHHHHHhccCCCCCC----CCCCh---hhHHH----
Q 011529 245 TGLAFSPFLIHR-------------F--GWPSVFYSFGSLGTVWFTVWLSKAHSSPAED----PQLRP---AEKKL---- 298 (483)
Q Consensus 245 ~g~~~~~~l~~~-------------~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~---~~~~~---- 298 (483)
.|.+++-.+... . =||..+.+.++..++... +.+..|++++-. ++.+. +.++.
T Consensus 195 aG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly-~Rl~M~Et~~Y~al~~~~~~~a~~d~~k~~~~~ 273 (538)
T KOG0252|consen 195 AGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLY-FRLKMPETARYTALVSKKLKQAAGDMKKVLSVD 273 (538)
T ss_pred hccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHH-hhhcCCcchhHHHHhhcCHhhhhhccccccccc
Confidence 877666544321 1 188777766655554433 333334433211 00000 00000
Q ss_pred h--hhcccCCCCCcccc---hhhhh---cChhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcchhhH--------H
Q 011529 299 I--VSSCASKEPVKTIP---WGLIL---SKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGL--------F 362 (483)
Q Consensus 299 ~--~~~~~~~~~~~~~~---~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--------~ 362 (483)
. .+......+.+... +...+ +-+.+......+|+...+.+....+....+.. .|+.+..... .
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~-ig~~~~~~~~~~~~~vA~~ 352 (538)
T KOG0252|consen 274 IEAESTAESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSA-IGVIPSANTYHELFKVAEG 352 (538)
T ss_pred cchhhccccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccHHHHHHHh-hccCCCcchHHHHHHHHHH
Confidence 0 00000011111111 11122 12445667778888888889988888888886 6766554433 1
Q ss_pred hHHHH-HHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhccch----hHHHHHHHHH-hhhhhhhh
Q 011529 363 CVLPW-LTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDS----PAMAVLCMAC-SQGTDAFS 436 (483)
Q Consensus 363 ~~~~~-~~~~i~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~-~~~~~~~~ 436 (483)
..+.. .+.+.|..+...++|++||+ .+...++.+..+..+......+ ....+++..+ ..+.....
T Consensus 353 ~~iia~~~~vPGyw~tv~~id~iGRk---------~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGP 423 (538)
T KOG0252|consen 353 NLIIAVCSTVPGYWFTVYFIDIIGRK---------YIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGP 423 (538)
T ss_pred HHHHHHHccCCceeEEEEEeehhhhH---------HHHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCC
Confidence 11222 22333555666789999988 3444455554444444433322 1112222222 22223333
Q ss_pred hchhhhhHhhhcc-Ccceeeeeeeec
Q 011529 437 QSGLYSNHQDIAP-RYSVSIISINIL 461 (483)
Q Consensus 437 ~~~~~~~~~~~~~-~~~g~~~g~~~~ 461 (483)
.........+..| |.|++.-|+..+
T Consensus 424 n~ttfivpaE~FParvR~t~hGIsAA 449 (538)
T KOG0252|consen 424 NATTFIVPAEIFPARVRSTCHGISAA 449 (538)
T ss_pred CceeEEeehhhchHHHhhhhhhHHHH
Confidence 3445556667666 568888876544
No 111
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.76 E-value=3.1e-17 Score=162.75 Aligned_cols=276 Identities=11% Similarity=0.030 Sum_probs=181.4
Q ss_pred HHHHHHHHHHHHhhhhhhhHHh-hhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcC-----CchHHHHHHHH
Q 011529 105 IVVLCFSAFLLCNMDRVNMSIA-ILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVG-----GKAVLGFGVVW 178 (483)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g-----~r~~~~~~~~~ 178 (483)
.+.++...++..++. ...... .+.+.+++|++.++++...++..+...+ .+++|+++||++ ||+.++++.++
T Consensus 27 ~~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~-K~l~g~l~D~~~i~G~rRr~~l~~~~~l 104 (468)
T TIGR00788 27 VLAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWAL-KPFAGVMSDTFPLFGYTKRWYLVLSGLL 104 (468)
T ss_pred HHHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCCCccchHHHHHHHHH
Confidence 445556667777777 444444 5557778999999999999999999988 555999999997 67777777766
Q ss_pred H-HHHHHHhhhhhcccH-HHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHH---HHHHHHHHhHHHHHHhhHHHh
Q 011529 179 W-SIATALTPVAAKLGL-PFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSL---ALVYSGMYLGSVTGLAFSPFL 253 (483)
Q Consensus 179 ~-~~~~~~~~~~~~~~~-~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~---~~~~~~~~~g~~~g~~~~~~l 253 (483)
. .+....++..+ +. ....+..++.+++.+...++..++..|..+ +++.... ++......+|.++|+.++|.+
T Consensus 105 ~~~~~~~~l~~~~--~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l 181 (468)
T TIGR00788 105 GSAILYGLLPGKV--SSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPL 181 (468)
T ss_pred HHHHHHHhccccc--chHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHH
Confidence 6 34434344334 43 344457889999999999999999999997 5554433 334444568999999999999
Q ss_pred hhccCchHHHHHHHHHHHHHHHHHHHhccCCCC-CCCCCChhhH---HHhhhcccCCCCCcccchhhhhcChhHHHHHHH
Q 011529 254 IHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPA-EDPQLRPAEK---KLIVSSCASKEPVKTIPWGLILSKPPVWALIVS 329 (483)
Q Consensus 254 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (483)
.+.++|+..|++.+++.++..+...+ .+|++. ..++..+.+. ..................+..+++|.++...+.
T Consensus 182 ~~~~~~~~~f~~~a~l~ll~~~~~~~-~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~~~l~f 260 (468)
T TIGR00788 182 LDKTLTRILFLITAALLLLQLFVSNL-SKERRAFVRPRIGTYLEMNMALLTLGVLANVKVQILGLRGAIQLLEIAKPLIF 260 (468)
T ss_pred HHhcCcchHHHHHHHHHHHHHHHHHh-cccccccccccccccchhhhhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHH
Confidence 99999999999988888777444444 344321 1111000000 000000000000001124456788888876665
Q ss_pred HHH-HHHHHHHHHHhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhc
Q 011529 330 HFC-HNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSK 387 (483)
Q Consensus 330 ~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~ 387 (483)
.++ +.........+. .+..+..|+++.+.|.+....+++.+++..+.+++.+|++.|
T Consensus 261 ifl~~~~~~~~~~~~f-~~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r 318 (468)
T TIGR00788 261 IFLSYANLPGASGSVF-CATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYR 318 (468)
T ss_pred HHHHHhhcCCCCceeE-EEEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHH
Confidence 555 322222211111 133345899999999999999999999999999998888866
No 112
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.76 E-value=7.5e-15 Score=144.39 Aligned_cols=306 Identities=16% Similarity=0.070 Sum_probs=214.0
Q ss_pred hhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHH-HHHHHHHHHHHhhhhhcccHHHHHHHHHHHhhhhhcchhHHHH
Q 011529 139 ATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGF-GVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNN 217 (483)
Q Consensus 139 ~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~ 217 (483)
+..++..++..+...+..|+.|.++|+-++||.++. ..++..+++..+.+.+..+++...+..++.-++.+......++
T Consensus 70 s~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna 149 (477)
T PF11700_consen 70 SLWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNA 149 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345788899999999999999999999987776554 4444555666666654335666666667777788888899999
Q ss_pred HHhhhcCCcch--------------------------hHHHHHHHHHHHhHHHHHHhhHHHhhhc--------cCchHHH
Q 011529 218 ILSKWVPVAER--------------------------SRSLALVYSGMYLGSVTGLAFSPFLIHR--------FGWPSVF 263 (483)
Q Consensus 218 ~~~~~~~~~~r--------------------------~~~~~~~~~~~~~g~~~g~~~~~~l~~~--------~g~~~~~ 263 (483)
++++..+++++ ++..+.-...+.+|.++.-.+.-.+... .+.|..+
T Consensus 150 ~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~ 229 (477)
T PF11700_consen 150 YLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAF 229 (477)
T ss_pred HhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHH
Confidence 99999999888 8999999999999998887766554322 2347888
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCCC-CCCChhh-HHHhhhcccCCCCCcccchhhhhcChhHHHHHHHHHHHHHHHHHHH
Q 011529 264 YSFGSLGTVWFTVWLSKAHSSPAED-PQLRPAE-KKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILL 341 (483)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (483)
.+.++..++..+..++..|+++.++ .+..... ....++ -...+|++.|+|.+..+++..+++.-+.+++.
T Consensus 230 ~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~g~~~--------l~~t~k~~~~~~~~~~fLia~~l~~dg~~ti~ 301 (477)
T PF11700_consen 230 LIVALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRFGFKR--------LWRTFKEIRKLRQLFLFLIAYFLYSDGVNTII 301 (477)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHHHHHH--------HHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH
Confidence 8888888877777777777766522 1111111 100000 02245677788999999999999999999999
Q ss_pred HhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhc--CCchhHHHHHHHHHHHHHHHHHHHH----hhc
Q 011529 342 TWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSK--GLSVTTVRKIMQSIGFLGPAFFLTQ----LSH 415 (483)
Q Consensus 342 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 415 (483)
.....|.++++|++..+...+..+..+.+++|.++.|++.||+|.| +...... ....++....+.. ...
T Consensus 302 ~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l-----~~~~~i~~~g~~G~~~~~~g 376 (477)
T PF11700_consen 302 SFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISL-----ILWIIIPLYGLFGFWPSFFG 376 (477)
T ss_pred HHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHH-----HHHHHHHHHHHHHhhhcccC
Confidence 9999999999999999999999999999999999999999999988 3221111 1111111111110 011
Q ss_pred cchhHHHHHHHHHhhhhhhhhhchhhhhHhhhccC-cceeeee
Q 011529 416 VDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPR-YSVSIIS 457 (483)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g 457 (483)
....+-+.++..+.+...+..++..-+...+..|+ +.+..+|
T Consensus 377 ~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFg 419 (477)
T PF11700_consen 377 LKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFG 419 (477)
T ss_pred cccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHH
Confidence 23334444444445555556677777777777664 4666666
No 113
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.74 E-value=1.7e-16 Score=157.93 Aligned_cols=284 Identities=17% Similarity=0.216 Sum_probs=224.9
Q ss_pred HHHHHHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHH
Q 011529 104 FIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIAT 183 (483)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 183 (483)
..+.++.+..+.+.+....+...+..+.+.|+++..+.|++.+.+-++..+...+..+..-|..|-+++-++.++++++.
T Consensus 97 ~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgs 176 (735)
T KOG3626|consen 97 MFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGS 176 (735)
T ss_pred hHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHH
Confidence 34555666777777777777888889999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhhc-----------------------------------------------cc--HH-HHHHHHHHHhhhhhcchh
Q 011529 184 ALTPVAAK-----------------------------------------------LG--LP-FLLVVRVFMGIGEGVAMP 213 (483)
Q Consensus 184 ~~~~~~~~-----------------------------------------------~~--~~-~l~~~~~l~G~~~~~~~~ 213 (483)
+++++.+- .+ +| .++++.++.|+|....++
T Consensus 177 ll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~t 256 (735)
T KOG3626|consen 177 LLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFT 256 (735)
T ss_pred HHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCcc
Confidence 88765310 00 23 567779999999999999
Q ss_pred HHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhcc------------------C-chHHHHHHHHHHHHHH
Q 011529 214 AMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF------------------G-WPSVFYSFGSLGTVWF 274 (483)
Q Consensus 214 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~------------------g-~~~~~~~~~~~~~~~~ 274 (483)
...+|+-|...+++-...+|+...+..+|.++|-++++++...+ | |-.-|++.+.+.++..
T Consensus 257 lGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a 336 (735)
T KOG3626|consen 257 LGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSA 336 (735)
T ss_pred CCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999886521 1 4455677777778877
Q ss_pred HHHHHhccCCCCCCCCCChhhHHHhhhccc--CCCCC-------cccchhhhhcChhHHHHHHHHHHHHHHHHHHHHhhH
Q 011529 275 TVWLSKAHSSPAEDPQLRPAEKKLIVSSCA--SKEPV-------KTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMP 345 (483)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (483)
+.+++++++.|+..++.+..+.+....+.. ...+. -....+.+++||.+....+...+....+.++.+++|
T Consensus 337 ~p~f~fPk~lp~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlP 416 (735)
T KOG3626|consen 337 VPLFFFPKELPKSQKRKRARDLHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYITFLP 416 (735)
T ss_pred HHHHhCcccCccccccchhhhhcccccccccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHHhhH
Confidence 788777777665543221111111111111 01111 112356788999999999999999999999999999
Q ss_pred HHHHHHhCCCcchhhHHhHHHHH-HHHHHHHHHHHHHHHHhhc
Q 011529 346 TYYNQVLHFNLTESGLFCVLPWL-TMAFSANLGGWIADTLVSK 387 (483)
Q Consensus 346 ~~~~~~~g~~~~~~~~~~~~~~~-~~~i~~~~~g~l~dr~g~~ 387 (483)
-|+++++|.++..+..+....++ +..+|.+++|++.+|+..+
T Consensus 417 KyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~ 459 (735)
T KOG3626|consen 417 KYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLS 459 (735)
T ss_pred HHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeeccc
Confidence 99999999999999999877766 6678889999999998755
No 114
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.74 E-value=1.2e-21 Score=195.18 Aligned_cols=279 Identities=18% Similarity=0.184 Sum_probs=186.0
Q ss_pred HHHHHHhhhhhhhHHhhhhhh--hhcCC---------ChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHH
Q 011529 111 SAFLLCNMDRVNMSIAILPMS--AEFNW---------NPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWW 179 (483)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~--~~~g~---------s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 179 (483)
++.+..+++...++...+... ..++. +..+.+++.+...++..++.+++|.++||+|||+.+.++.++.
T Consensus 7 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~ 86 (451)
T PF00083_consen 7 LGGFLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLM 86 (451)
T ss_pred HHHHHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhccccccccccccccccccccccccccc
Confidence 344666777666655544433 22222 2245789999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhcc-cHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhcc-
Q 011529 180 SIATALTPVAAKL-GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF- 257 (483)
Q Consensus 180 ~~~~~~~~~~~~~-~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~- 257 (483)
.++.++..+++.. +++.+.++|++.|++.|...+....++.|..|+++|++..++.+....+|..++..++..+....
T Consensus 87 ~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~ 166 (451)
T PF00083_consen 87 IIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSD 166 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999888633 68899999999999999999999999999999999999999999999999999988775554333
Q ss_pred --CchHHHHHHHHHHHHHHHHHHHhccCCCCC---CCCCChhhH------------HHhhhcccCCCC--Ccccchhhhh
Q 011529 258 --GWPSVFYSFGSLGTVWFTVWLSKAHSSPAE---DPQLRPAEK------------KLIVSSCASKEP--VKTIPWGLIL 318 (483)
Q Consensus 258 --g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~------------~~~~~~~~~~~~--~~~~~~~~~~ 318 (483)
+||..+.+..+..++..+.. ...||.|+- +.+.++.++ ++..+..++.++ +.+..+++++
T Consensus 167 ~~~Wr~~~~~~~~~~l~~~~~~-~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 245 (451)
T PF00083_consen 167 NWGWRILLIFGAIPSLLVLLLR-FFLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRDLF 245 (451)
T ss_pred cccccccccccccccccccccc-cccccccceecccccccccccccccccccccccccccccccccccccccceeeeecc
Confidence 49999988887776655444 445555431 000000000 000000000000 0113466666
Q ss_pred cChh----HHHHHHHHHHH-HHHHHHHHHhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcCCchhH
Q 011529 319 SKPP----VWALIVSHFCH-NWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTT 393 (483)
Q Consensus 319 ~~~~----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~~~~~~ 393 (483)
+++. +........+. ..+.+....+.+.++++ .+.+.. -.......+...++.+++..+.||+|||+....+
T Consensus 246 ~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~ 322 (451)
T PF00083_consen 246 RNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFEN-AGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIG 322 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccc-cccccc--cccccccccccccccccccccccccccccccccc
Confidence 6643 22222222222 22333444555666655 676665 2223344456667777788999999999765544
No 115
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.71 E-value=9.7e-15 Score=135.73 Aligned_cols=310 Identities=14% Similarity=0.126 Sum_probs=204.4
Q ss_pred hhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcC-----CchHHH-HHHHHHHHHHHHhhhhh----c-------c
Q 011529 130 MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVG-----GKAVLG-FGVVWWSIATALTPVAA----K-------L 192 (483)
Q Consensus 130 ~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g-----~r~~~~-~~~~~~~~~~~~~~~~~----~-------~ 192 (483)
+..|++++....+.+.++..+... ..+.+|+.+|+.+ ||..++ .+.+..+.+..+..++. . .
T Consensus 6 MIvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~ 84 (403)
T PF03209_consen 6 MIVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGP 84 (403)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccc
Confidence 567899999999999999988775 6999999999988 666644 45555555544443321 1 0
Q ss_pred c-HH--HHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHHH---
Q 011529 193 G-LP--FLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSF--- 266 (483)
Q Consensus 193 ~-~~--~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~--- 266 (483)
. .+ ...+...+.|+|.+...+...+++.|..|+|+|+++.++...+.-+|.+++..+.+.+.+.++..-...+.
T Consensus 85 ~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~ 164 (403)
T PF03209_consen 85 FWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGV 164 (403)
T ss_pred cHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHH
Confidence 1 22 34455678899999999999999999999999999999999999999999999999999877643333332
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHH
Q 011529 267 GSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPT 346 (483)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (483)
+++.++..++..+- .|++.++....++ ++++.-...++++..+|+...+....++...+++.-...+-+
T Consensus 165 a~i~~~l~~ia~wg-~E~r~~~~~~~~~----------~~~~~f~~a~~~~~~~~~a~~f~~fl~l~t~a~~~QD~iLEP 233 (403)
T PF03209_consen 165 ALIALLLNLIALWG-QEPRRSRRAAAAE----------RPRPPFREAWRQVWASPQARRFFVFLFLGTLAFFMQDVILEP 233 (403)
T ss_pred HHHHHHHHHHHHHh-cccCCcccccCCC----------CCCccHHHHHHHHHhCCChhHHHHHHHHHHHHHHhhHHHcCC
Confidence 22222222222222 2221111110000 111111334777888999999999999999999999999999
Q ss_pred HHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHH-HhhcCCchhHHHHHHHHHHHHHHHHHHHHhhccchhHH-HHH
Q 011529 347 YYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADT-LVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAM-AVL 424 (483)
Q Consensus 347 ~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 424 (483)
|--+.+|++..+...+....+.+..+|..+.|++..| .++++. ..+-+..+... ...+.......+.+. ...
T Consensus 234 ygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~-----a~~G~~~~~~~-f~lii~a~~~~~~~~~~~~ 307 (403)
T PF03209_consen 234 YGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRT-----AALGCLLGALA-FALIILAGPLGSPWLFRPG 307 (403)
T ss_pred chhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHH-----HHHHHHHHHHH-HHHHHHHHhcccchHHHHH
Confidence 9999999999999999999999999999999988774 333321 11111111111 112222223333333 344
Q ss_pred HHHHhhhhhhhhhchhhhhHhhhccCcceeeee
Q 011529 425 CMACSQGTDAFSQSGLYSNHQDIAPRYSVSIIS 457 (483)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g 457 (483)
.+.++.+.+.+....+...+.-..+++.|..+|
T Consensus 308 ~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG 340 (403)
T PF03209_consen 308 VFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMG 340 (403)
T ss_pred HHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHH
Confidence 445555555555554444444455667776665
No 116
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.69 E-value=2e-14 Score=131.59 Aligned_cols=249 Identities=14% Similarity=0.141 Sum_probs=177.6
Q ss_pred hhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhcccHHHH
Q 011529 118 MDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFL 197 (483)
Q Consensus 118 ~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l 197 (483)
.....-+|.+-.+.+++|++..|++.+.........+..++.|.++||+|||+..++..++..++++.. ..+ +++.+
T Consensus 48 ~aDWLQGpY~Y~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k-~~~--~~~~L 124 (354)
T PF05631_consen 48 AADWLQGPYLYALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTK-HSS--NYPVL 124 (354)
T ss_pred HHHHhhcchhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH-hcc--ccHHH
Confidence 344445666556667899999999999999999999999999999999999999999999999888754 345 89999
Q ss_pred HHHHHHHhhhhhcchhHHHHHHhh-h----cCCcchhHHHHHHH-HHHHhHHHHHHhhHHHhhhccCc--hHHHHHHHHH
Q 011529 198 LVVRVFMGIGEGVAMPAMNNILSK-W----VPVAERSRSLALVY-SGMYLGSVTGLAFSPFLIHRFGW--PSVFYSFGSL 269 (483)
Q Consensus 198 ~~~~~l~G~~~~~~~~~~~~~~~~-~----~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~~~g~--~~~~~~~~~~ 269 (483)
+++|++.|++.+..+.+..++... . +|++..+..++... ..+++-.+++.+++.++.+..+. ..+|.....+
T Consensus 125 ~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~ 204 (354)
T PF05631_consen 125 LLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVL 204 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHH
Confidence 999999999999999998887543 2 22333344444444 23344455556666666666554 7788887777
Q ss_pred HHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHHHH
Q 011529 270 GTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYN 349 (483)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (483)
.++..+++....+|...+..+..+..+.. ...++.+.+||+++.+.+...++-...+.+...-.+.++
T Consensus 205 l~~~~~~I~~~W~ENyg~~~~~~~~~~~~------------~~a~~~i~~d~ril~LG~~qslFE~smy~FVflWtPaL~ 272 (354)
T PF05631_consen 205 LAVAAVLILKTWPENYGDTSSSSSLSGSF------------REAWRAILSDPRILLLGLIQSLFEGSMYLFVFLWTPALD 272 (354)
T ss_pred HHHHHHHHHhcccccCCCcccccchHHHH------------HHHHHHHHcCchhHHHHHHHHHHHHHHHHheeeeeceec
Confidence 77777766655555443322211111110 123567888999999999999999888887644444444
Q ss_pred HHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHH
Q 011529 350 QVLHFNLTESGLFCVLPWLTMAFSANLGGWIADT 383 (483)
Q Consensus 350 ~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr 383 (483)
. +-.....|++++.+.++.++|+.+..++..+
T Consensus 273 ~--~~~~~P~GlIFssFM~a~MlGS~lf~~l~s~ 304 (354)
T PF05631_consen 273 P--DDEELPLGLIFSSFMVAMMLGSSLFSRLLSK 304 (354)
T ss_pred C--CCCCCCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence 2 2234567999999999999999888766554
No 117
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.68 E-value=3.8e-14 Score=134.37 Aligned_cols=351 Identities=16% Similarity=0.124 Sum_probs=218.5
Q ss_pred HHHHHHHHHHHhhhhhhhHHh-hhhhhhhcC----CChhhHHHHHHHHHHHHHHHHhhHHHHHhhc-CCchHHHHHHHHH
Q 011529 106 VVLCFSAFLLCNMDRVNMSIA-ILPMSAEFN----WNPATVGLIQSSFFWGYLLTQIAGGIWADTV-GGKAVLGFGVVWW 179 (483)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g----~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~ 179 (483)
+..++..-+-..+..+.+... .-++..+++ +++++..-+.+.|....-+..+++|+++||+ |+|+++..+.+++
T Consensus 23 l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~ 102 (498)
T COG3104 23 LYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILM 102 (498)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHH
Confidence 334444455444444433332 333555555 9999999899998888888999999999995 9999999999999
Q ss_pred HHHHHHhhhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCc--chhHHHHHHHHHHHhHHHHHHhhHHHhhhcc
Q 011529 180 SIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVA--ERSRSLALVYSGMYLGSVTGLAFSPFLIHRF 257 (483)
Q Consensus 180 ~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~--~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 257 (483)
.++.++++.....+...++++..+.++|.|..-+...+++.|.+|++ +|-..++++.++.++|+.++|++.+++.+..
T Consensus 103 ~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~ 182 (498)
T COG3104 103 AIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINY 182 (498)
T ss_pred HHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhh
Confidence 99999988773115778889999999999999999999999999864 4778899999999999999999999999999
Q ss_pred CchHHHHHHHHHHHHHHHHHHHhccCCCCCC---C--CCChhhHHHh---------hh-------ccc------------
Q 011529 258 GWPSVFYSFGSLGTVWFTVWLSKAHSSPAED---P--QLRPAEKKLI---------VS-------SCA------------ 304 (483)
Q Consensus 258 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~---------~~-------~~~------------ 304 (483)
||+..|.+.++-..+.++..+..++...... + ..+....... .. ...
T Consensus 183 g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~ 262 (498)
T COG3104 183 GWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSFNFLLPVLGGLVVMILAALLTLLLNQNTFSGVLLVISILI 262 (498)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHccchhcCCCCCCCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999988888777766665543321111 0 0000000000 00 000
Q ss_pred ------CCCCCcccchhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCC----cchhhHHhHHHHHHHHHHH
Q 011529 305 ------SKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFN----LTESGLFCVLPWLTMAFSA 374 (483)
Q Consensus 305 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~----~~~~~~~~~~~~~~~~i~~ 374 (483)
+....++.. .+.-|-.....+.+...++...+....+.+..|..+..+.+ ....++..+...+..++..
T Consensus 263 ~~~~~~~~~~~~~~~-~er~r~~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~ 341 (498)
T COG3104 263 AIIYFAEAFRSPKVF-DERRRLLAAIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFS 341 (498)
T ss_pred HHHHHHHHhccCccH-HHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHhhcccccceecCHHHHHhhCHHHHHHHH
Confidence 000000000 01000111223333333333333333444555555432222 2345677888888888888
Q ss_pred HHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhh--------ccchhHHHHHHHHHhhhhhhhhhchhhhhHhh
Q 011529 375 NLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLS--------HVDSPAMAVLCMACSQGTDAFSQSGLYSNHQD 446 (483)
Q Consensus 375 ~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (483)
++..++..|.++++.-.....+..+...+....+..+... ...+.++.+....+......+..|.-.+....
T Consensus 342 pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~ 421 (498)
T COG3104 342 PILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTK 421 (498)
T ss_pred HHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 8888888886555322222222333333333333222222 11245556666666666667777777888887
Q ss_pred hccCc-ceeeee
Q 011529 447 IAPRY-SVSIIS 457 (483)
Q Consensus 447 ~~~~~-~g~~~g 457 (483)
..|+. .+..++
T Consensus 422 laP~~~~s~~ma 433 (498)
T COG3104 422 LAPPALKSFIMA 433 (498)
T ss_pred hChHHHHHHHHH
Confidence 77654 455554
No 118
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.66 E-value=8.7e-14 Score=129.01 Aligned_cols=305 Identities=15% Similarity=0.040 Sum_probs=212.9
Q ss_pred hhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchH-HHHHHHHHHHHHHHhhhhhc-ccHHHHHHHHHHHhhhhhcchhHH
Q 011529 138 PATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAV-LGFGVVWWSIATALTPVAAK-LGLPFLLVVRVFMGIGEGVAMPAM 215 (483)
Q Consensus 138 ~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~-~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~l~G~~~~~~~~~~ 215 (483)
.+..+...++..+...+..|+.|.++|+.|+||. +-....+..++.+++.+.++ ..++..++...+..++........
T Consensus 57 ~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfy 136 (438)
T COG2270 57 TAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFY 136 (438)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheeh
Confidence 3557888999999999999999999999987665 45555666666777777774 245566677888889988889999
Q ss_pred HHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhH--HHhh----------------hccCchHHHHHHHHHHHHHHHHH
Q 011529 216 NNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFS--PFLI----------------HRFGWPSVFYSFGSLGTVWFTVW 277 (483)
Q Consensus 216 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~--~~l~----------------~~~g~~~~~~~~~~~~~~~~~~~ 277 (483)
++++.+..++++-++..++-.....+|+.+.-++. ..+. +...-|..+.+.++..++..+..
T Consensus 137 ds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm 216 (438)
T COG2270 137 DSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPM 216 (438)
T ss_pred hhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHH
Confidence 99999999999888888888888888877665443 1111 22346778888888888877777
Q ss_pred HHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcc
Q 011529 278 LSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLT 357 (483)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 357 (483)
++..++.++...+..+.-....+ +-...++++.+++.+...++..+++.-+.+++......|....+|++..
T Consensus 217 ~~~v~~~~~~~~~~~~~l~~g~k--------~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~ 288 (438)
T COG2270 217 ILNVHDAEKISSPPPTALRNGFK--------ELKSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSST 288 (438)
T ss_pred HhcccccccccccchHHHHHHHH--------HHHHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHH
Confidence 77777665432111111111000 0023467788889999999999999999999999999999988999999
Q ss_pred hhhHHhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHhhhhhhhhh
Q 011529 358 ESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQ 437 (483)
Q Consensus 358 ~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (483)
+..++.....+.+++|.++.|++.||+|.|+....+. .+...+...... ... ....+++..+.+...+..+
T Consensus 289 ~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~l-------vi~~~~~~~~~~-~~~-~~~f~i~gll~g~s~G~~q 359 (438)
T COG2270 289 ELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGL-------VILSIAALYLIF-LEG-ELDFWILGLLVGTSLGGAQ 359 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHH-------HHHHHHHHHHHH-ccc-cHHHHHHHHHHHHhcchHH
Confidence 9999999999999999999999999999985433222 111111112121 112 2223333233333334445
Q ss_pred chhhhhHhhhc-cCcceeeeeee
Q 011529 438 SGLYSNHQDIA-PRYSVSIISIN 459 (483)
Q Consensus 438 ~~~~~~~~~~~-~~~~g~~~g~~ 459 (483)
...-++..+.. +++.++.+|+.
T Consensus 360 A~SRSy~~~lvp~~k~~~fFgly 382 (438)
T COG2270 360 ASSRSYLARLVPKGKEGRFFGLY 382 (438)
T ss_pred HHHHHHHHHhCCCccccceeehh
Confidence 55666666655 56688888843
No 119
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.65 E-value=1.4e-17 Score=165.91 Aligned_cols=280 Identities=15% Similarity=0.201 Sum_probs=3.0
Q ss_pred HHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhh
Q 011529 108 LCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTP 187 (483)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~ 187 (483)
.+++..+++....+.+...+..+.++|+++..+.|++.+.+-++..+..++..++.+|..|-|++-++.++++++.++++
T Consensus 7 ~~~~~~~~q~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~ 86 (539)
T PF03137_consen 7 FLCLLGLFQMMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFA 86 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHh
Confidence 34445555566667777788899999999999999999999999999999999999999888899999999999988865
Q ss_pred hhhc----c--------------------------------------------cHHHHHHHHHHHhhhhhcchhHHHHHH
Q 011529 188 VAAK----L--------------------------------------------GLPFLLVVRVFMGIGEGVAMPAMNNIL 219 (483)
Q Consensus 188 ~~~~----~--------------------------------------------~~~~l~~~~~l~G~~~~~~~~~~~~~~ 219 (483)
+.+- + -++.++++.++.|+|....++...+|+
T Consensus 87 lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYi 166 (539)
T PF03137_consen 87 LPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYI 166 (539)
T ss_dssp -----------------------------------------------------------------SSS------------
T ss_pred ccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeee
Confidence 4210 0 035678889999999999999999999
Q ss_pred hhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhcc---------------------C-chHHHHHHHHHHHHHHHHH
Q 011529 220 SKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF---------------------G-WPSVFYSFGSLGTVWFTVW 277 (483)
Q Consensus 220 ~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~---------------------g-~~~~~~~~~~~~~~~~~~~ 277 (483)
-|..++++-+..+|+..++..+|.++|-++++.+.+.+ | |-.-|++.+++.++..+..
T Consensus 167 DDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl 246 (539)
T PF03137_consen 167 DDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPL 246 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998776421 1 3334555666666666666
Q ss_pred HHhccCCCCCCCCCCh------hhHHHhhhcccC---------CCCCcccchhhhhcChhHHHHHHHHHHHHHHHHHHHH
Q 011529 278 LSKAHSSPAEDPQLRP------AEKKLIVSSCAS---------KEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLT 342 (483)
Q Consensus 278 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (483)
+.++++-|+..+..++ ++++...+..++ ..+.-....+.+++||.+....+...+......++.+
T Consensus 247 ~~FPk~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~t 326 (539)
T PF03137_consen 247 FFFPKKLPGTSERQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVSGFAT 326 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HcCCccCCCcccccchhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHH
Confidence 6666655544111000 000000000000 0111233466789999999999999999999999999
Q ss_pred hhHHHHHHHhCCCcchhhHHhHHHHH-HHHHHHHHHHHHHHHHhhc
Q 011529 343 WMPTYYNQVLHFNLTESGLFCVLPWL-TMAFSANLGGWIADTLVSK 387 (483)
Q Consensus 343 ~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~i~~~~~g~l~dr~g~~ 387 (483)
+.|.|++.+++.++.++.++.....+ ++++|.+++|++.+|++-+
T Consensus 327 F~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~ 372 (539)
T PF03137_consen 327 FLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLS 372 (539)
T ss_dssp ----------------------------------------------
T ss_pred HHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCc
Confidence 99999999999999999998877765 7788999999999998654
No 120
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.64 E-value=5.8e-15 Score=144.91 Aligned_cols=163 Identities=17% Similarity=0.220 Sum_probs=134.2
Q ss_pred hHHhhhhhhhhcCCC--------hhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhc--c
Q 011529 123 MSIAILPMSAEFNWN--------PATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAK--L 192 (483)
Q Consensus 123 ~~~~~~~~~~~~g~s--------~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~--~ 192 (483)
.....+.+.++.|.+ ..+.+...++..+...++.++.|++.||+|+|+++.++.++.+++..+...... .
T Consensus 227 ~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~ 306 (418)
T TIGR00889 227 TNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYF 306 (418)
T ss_pred HHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchh
Confidence 334455555666644 366799999999999999999999999999999999999998888766655321 1
Q ss_pred cHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHH-HHHHhHHHHHHhhHHHhhhc------cCchHHHHH
Q 011529 193 GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVY-SGMYLGSVTGLAFSPFLIHR------FGWPSVFYS 265 (483)
Q Consensus 193 ~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~~------~g~~~~~~~ 265 (483)
+++.+++.+++.|++.+...+....++.|++|+++|++++|+.+ ....+|..+||.++|.+.++ +||+.+|.+
T Consensus 307 ~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~ 386 (418)
T TIGR00889 307 GYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLF 386 (418)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHH
Confidence 24567778999999999888898999999999999999999997 67889999999999999987 469999999
Q ss_pred HHHHHHHHHHHHHHhccCCC
Q 011529 266 FGSLGTVWFTVWLSKAHSSP 285 (483)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~ 285 (483)
.+++.++..++.+++.+++.
T Consensus 387 ~~~~~~i~~~l~~~~~~~~~ 406 (418)
T TIGR00889 387 FAGYIAILAVLFMIFFKYSH 406 (418)
T ss_pred HHHHHHHHHHHHHHHhCCcc
Confidence 88888888777777776553
No 121
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.61 E-value=3.3e-13 Score=129.49 Aligned_cols=259 Identities=17% Similarity=0.199 Sum_probs=180.0
Q ss_pred ChhHHHHHHHHHHHHHHhhhhhhhHHhhhhhhhh--cCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCC-chHHHHHH
Q 011529 100 PKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAE--FNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGG-KAVLGFGV 176 (483)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~-r~~~~~~~ 176 (483)
+.+|+.+.+..+..++.....+.+.+..-.+.++ .+.+.+..|++.++..++.+++++.+|++..|.+. |+.++.+.
T Consensus 30 ~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ 109 (488)
T KOG2325|consen 30 KTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSF 109 (488)
T ss_pred CCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHH
Confidence 4467778888888888888877777665555555 78888999999999999999999999999999986 88899999
Q ss_pred HHHHHHHHHh-hhh--hcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHh
Q 011529 177 VWWSIATALT-PVA--AKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFL 253 (483)
Q Consensus 177 ~~~~~~~~~~-~~~--~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 253 (483)
++..++.++. .+. ++...+.++++|++.|+|.+. ....-+|+++....++|.++++....+..+|.++||.+...+
T Consensus 110 ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n-~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f 188 (488)
T KOG2325|consen 110 LIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGN-FAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAF 188 (488)
T ss_pred HHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCccc-HHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHH
Confidence 9999998877 332 222468899999999999764 567789999988889999999999999999999999887666
Q ss_pred hhc--cC-----------chHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcC
Q 011529 254 IHR--FG-----------WPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSK 320 (483)
Q Consensus 254 ~~~--~g-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (483)
..- -| +..+-|+.+++.++..+......+|......+.+.++.++ .+..+++.+..+.++
T Consensus 189 ~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~------ 261 (488)
T KOG2325|consen 189 TPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGIIDKKKRSVEE-EKSDIEKVKKPKLDW------ 261 (488)
T ss_pred hhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccCccccccccchh-hccchhhhccCChhH------
Confidence 431 11 3456677777777777777766666544432221111100 000001111111111
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcchhhHHhHHH
Q 011529 321 PPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLP 366 (483)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 366 (483)
+..+.+.+..+...+......+..+......++++..++....+..
T Consensus 262 ~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~~~gi~ 307 (488)
T KOG2325|consen 262 VAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVLYNGIT 307 (488)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHHhhhhH
Confidence 1233445555555666666677777777777888877765544443
No 122
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.60 E-value=2.3e-14 Score=139.12 Aligned_cols=151 Identities=11% Similarity=0.075 Sum_probs=128.0
Q ss_pred hHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhcccHHHHHHHHH
Q 011529 123 MSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRV 202 (483)
Q Consensus 123 ~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 202 (483)
.....+.+.+++|.+..+.+.+.+...++..++.++.|++.||+|||+.+.++.++..++.++..+.+..+...+++..+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (377)
T TIGR00890 224 LIGLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVA 303 (377)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHH
Confidence 33445556678899999999999999999999999999999999999999999888888887776665222233455677
Q ss_pred HHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHH
Q 011529 203 FMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVW 273 (483)
Q Consensus 203 l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~ 273 (483)
+.|++.+...+....++.|.+|+++|+++.|+.+....+|..++|.+.|.+.+..||++.|.+.+++.++.
T Consensus 304 ~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 304 LVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred HHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHh
Confidence 88888888888888899999999999999999999999999999999999999999999999888776654
No 123
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.59 E-value=1.3e-13 Score=135.14 Aligned_cols=159 Identities=18% Similarity=0.181 Sum_probs=132.6
Q ss_pred hHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhcccHHHHHHHHH
Q 011529 123 MSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRV 202 (483)
Q Consensus 123 ~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 202 (483)
...+++.+.++.|. .+.++..+.+.++..++.++.|++.||+|+|+.+..+.++.+++.++..+.+ +.+.+++..+
T Consensus 235 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 310 (399)
T PRK05122 235 IATFITLYYAARGW--DGAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAP--SPWMALIGAA 310 (399)
T ss_pred HHHHHHHHHHHccc--ccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhc--cHHHHHHHHH
Confidence 34445555555565 3456677788889999999999999999999999988888888887777777 7778888899
Q ss_pred HHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHHHHHHhcc
Q 011529 203 FMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAH 282 (483)
Q Consensus 203 l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 282 (483)
+.|++.+..++.....+.+.+|+++|+++.|+++....+|..+++.+.|.+.+..||+..+++.+++.++..+..+...+
T Consensus 311 l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 390 (399)
T PRK05122 311 LTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYR 390 (399)
T ss_pred HHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999998888888888899999999999999999999999999999999999999999999988888877666665555
Q ss_pred CCC
Q 011529 283 SSP 285 (483)
Q Consensus 283 ~~~ 285 (483)
+++
T Consensus 391 ~~~ 393 (399)
T PRK05122 391 RAP 393 (399)
T ss_pred ccc
Confidence 443
No 124
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.59 E-value=1.3e-14 Score=119.58 Aligned_cols=136 Identities=24% Similarity=0.419 Sum_probs=121.3
Q ss_pred HHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcC
Q 011529 145 QSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVP 224 (483)
Q Consensus 145 ~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~ 224 (483)
.+.+.++..++.++.|++.||+|||+.+..+..+..++.+.....+ +++.+.+.+++.|++.+...+...+++.|.+|
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 81 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSS--NITVLIIARFLQGFGAAFALVAGAALIADIYP 81 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhc--cHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCC
Confidence 3456778889999999999999999999999988888888887777 88999999999999999999999999999999
Q ss_pred CcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHHHHHHhcc
Q 011529 225 VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAH 282 (483)
Q Consensus 225 ~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 282 (483)
+++|++.+++.+....+|..++|.+.+.+.+..+|++.+++.+++.++..+......+
T Consensus 82 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (141)
T TIGR00880 82 PEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLP 139 (141)
T ss_pred hhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCC
Confidence 9999999999999999999999999999999899999999888877776666655543
No 125
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.59 E-value=2.7e-13 Score=136.17 Aligned_cols=169 Identities=12% Similarity=0.103 Sum_probs=123.4
Q ss_pred hhhhhhhHHhhhhhh-hhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHH-hhhhhcccH
Q 011529 117 NMDRVNMSIAILPMS-AEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATAL-TPVAAKLGL 194 (483)
Q Consensus 117 ~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~-~~~~~~~~~ 194 (483)
....+....++|.+. +++|.+..+.++......++..++.++.|+++||+|||+++..+.++..++.+. +......+.
T Consensus 263 ~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (490)
T PRK10642 263 NVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVI 342 (490)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCH
Confidence 344444555677744 668999888888888889999999999999999999999988877654433322 222221156
Q ss_pred HHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhcc-CchHHHHHHHHHHHHH
Q 011529 195 PFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF-GWPSVFYSFGSLGTVW 273 (483)
Q Consensus 195 ~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-g~~~~~~~~~~~~~~~ 273 (483)
..+++++++.|++.+........++.+.+|++.|++++|+.+....+++.++|.+.+++.+.. +|+..+++..+.+++.
T Consensus 343 ~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~ 422 (490)
T PRK10642 343 GLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIG 422 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHH
Confidence 777888888888877777778888999999999999999866656677788999999888764 4776766666666555
Q ss_pred HHHHHHhccCCCC
Q 011529 274 FTVWLSKAHSSPA 286 (483)
Q Consensus 274 ~~~~~~~~~~~~~ 286 (483)
.+..++. ||+++
T Consensus 423 ~~~~~~~-pes~~ 434 (490)
T PRK10642 423 LITGVTM-KETAN 434 (490)
T ss_pred HHHHHHh-ccccC
Confidence 5554443 55544
No 126
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.59 E-value=1.5e-13 Score=134.19 Aligned_cols=156 Identities=13% Similarity=0.082 Sum_probs=126.3
Q ss_pred hhHHhhhh-hhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhcccHHHHHHH
Q 011529 122 NMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVV 200 (483)
Q Consensus 122 ~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 200 (483)
.+....|. +.+++|.++.+.+++.+...+...++.++.|+++||+|||+.+..+.+...+........+ +.+.+++.
T Consensus 234 ~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~ 311 (393)
T PRK15011 234 LYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAH--SPAILLGL 311 (393)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHh--hHHHHHHH
Confidence 34445665 5577899999999998888888888999999999999999988777666555554444455 67777788
Q ss_pred HHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHHHHHHh
Q 011529 201 RVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSK 280 (483)
Q Consensus 201 ~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 280 (483)
+++.+++.+...+....+..|.+| ++|++++++++....+|..++|.++|.+.+.+||+..|++.+++.++..+..+..
T Consensus 312 ~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 390 (393)
T PRK15011 312 QLLNAIYIGILGGIGMLYFQDLMP-GQAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRI 390 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCC-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhh
Confidence 888888877777777788889886 5699999999999999999999999999999999999998877777766555543
No 127
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.59 E-value=2.3e-14 Score=141.26 Aligned_cols=149 Identities=10% Similarity=0.074 Sum_probs=129.5
Q ss_pred hcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhcccHHHHHHHHHHHhhhhhcch
Q 011529 133 EFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAM 212 (483)
Q Consensus 133 ~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~ 212 (483)
+.+.+..+.|++.++..++..++.+++|++.||+|+|+.+..+.++.+++.++..+.+ +.+.+++.+++.|++.+...
T Consensus 256 ~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~--~~~~~~~~~~l~g~~~~~~~ 333 (420)
T PRK09528 256 TPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFAT--GPLEVSILKLLHAFEVPFLL 333 (420)
T ss_pred ccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHH
Confidence 3467778899999999999999999999999999999999999998888888888887 88888889999999988888
Q ss_pred hHHHHHHhhhcCCcchhHHHHH-HHHHHHhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHHHHHHhccC
Q 011529 213 PAMNNILSKWVPVAERSRSLAL-VYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS 283 (483)
Q Consensus 213 ~~~~~~~~~~~~~~~r~~~~~~-~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (483)
+....++.+.+|++.++...+. ++....+|.+++|.+.|++.+..||+..|.+.+++.++..++.+...++
T Consensus 334 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~ 405 (420)
T PRK09528 334 VGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSG 405 (420)
T ss_pred HHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcC
Confidence 8888999999999988887765 6778899999999999999999999999999888877766655555444
No 128
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.59 E-value=1e-13 Score=142.57 Aligned_cols=138 Identities=11% Similarity=0.030 Sum_probs=117.6
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhh
Q 011529 142 GLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSK 221 (483)
Q Consensus 142 g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~ 221 (483)
.+...+..++.+++.++.|+++||+|||++++++.++.+++++++.+.+ +.+.+++.+++.|++.+..++...++++|
T Consensus 598 ~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~--s~~~ll~~~~l~g~~~~~~~~~~~a~~aE 675 (742)
T TIGR01299 598 YFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGN--SESAMIALLCLFGGLSIAAWNALDVLTVE 675 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445677789999999999999999999999999999999998888887 77778888888898888888999999999
Q ss_pred hcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHHHHHHhccC
Q 011529 222 WVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS 283 (483)
Q Consensus 222 ~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (483)
++|.++|++++|+.++...+|.++||++++.+.+. +...+|++.+++.++..++.+++ |+
T Consensus 676 l~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll~~~L-PE 735 (742)
T TIGR01299 676 LYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGLLALKL-PD 735 (742)
T ss_pred HcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHhC-CC
Confidence 99999999999999999999999999999988764 45667777777776665555544 44
No 129
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.58 E-value=1.2e-13 Score=135.63 Aligned_cols=158 Identities=15% Similarity=0.019 Sum_probs=129.5
Q ss_pred hhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhcccHHHHHHH
Q 011529 121 VNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVV 200 (483)
Q Consensus 121 ~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 200 (483)
.....+.|.+.++.|.+..+.+.+.+...++..++.++.|++.||+|||+.+..+.+...++.++..+.+ +.+.+.+.
T Consensus 237 ~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 314 (406)
T PRK11551 237 YFLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAP--SFAGMLLA 314 (406)
T ss_pred HHHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcC--cHHHHHHH
Confidence 3344557777788899999999999999999999999999999999999998887777777666666666 67777778
Q ss_pred HHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccC-chHHHHHHHHHHHHHHHHHHH
Q 011529 201 RVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG-WPSVFYSFGSLGTVWFTVWLS 279 (483)
Q Consensus 201 ~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-~~~~~~~~~~~~~~~~~~~~~ 279 (483)
.++.|++.+...+...+++.|.+|+++|++..|+.+....+|..+||.++|.+.++.+ |...+++.....++..+..+.
T Consensus 315 ~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (406)
T PRK11551 315 GFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALL 394 (406)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHH
Confidence 8888988888888889999999999999999999999999999999999999988754 555565555555554444443
Q ss_pred h
Q 011529 280 K 280 (483)
Q Consensus 280 ~ 280 (483)
.
T Consensus 395 ~ 395 (406)
T PRK11551 395 L 395 (406)
T ss_pred H
Confidence 3
No 130
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.58 E-value=8.6e-14 Score=139.06 Aligned_cols=175 Identities=13% Similarity=0.038 Sum_probs=128.0
Q ss_pred HHHHHHHHHHHhhhhhhhHHhhhh-hhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHH
Q 011529 106 VVLCFSAFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATA 184 (483)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 184 (483)
++.+.+..++.+........++|. +.+++|.+..+.++..+...++..++.+++|+++||+|||+.+.....+..++..
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~ 339 (467)
T PRK09556 260 IWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFT 339 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHH
Confidence 333444455545444456666776 5577999999999999999999999999999999999999887665444443332
Q ss_pred HhhhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHh-HHHHHHhhHHHhhh--------
Q 011529 185 LTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYL-GSVTGLAFSPFLIH-------- 255 (483)
Q Consensus 185 ~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~~~l~~-------- 255 (483)
+..+....+.+.+.+.+++.|++.............|.+|+++|+++.|+.+...++ |..++|.+.|.+.+
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~ 419 (467)
T PRK09556 340 LGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPI 419 (467)
T ss_pred HHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhccccccccc
Confidence 222221115666667788888654433333346777999999999999999999997 77999999999999
Q ss_pred ----ccCchHHHHHHHHHHHHHHHHHHHh
Q 011529 256 ----RFGWPSVFYSFGSLGTVWFTVWLSK 280 (483)
Q Consensus 256 ----~~g~~~~~~~~~~~~~~~~~~~~~~ 280 (483)
..+|+..|++.++..++..+..+..
T Consensus 420 ~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 448 (467)
T PRK09556 420 FGYTLTGWAGTFAALDIAAIGCICLMAIV 448 (467)
T ss_pred ccccccChHHHHHHHHHHHHHHHHHHHHH
Confidence 5789999998877777765554443
No 131
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.57 E-value=2.1e-13 Score=132.57 Aligned_cols=160 Identities=12% Similarity=0.032 Sum_probs=138.2
Q ss_pred HHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhcc
Q 011529 113 FLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKL 192 (483)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~ 192 (483)
.++.......+....|.+.+++|.++.++|++.++..++..+..++.+++.||+|+|+.+.++.++..+..++.++.+
T Consensus 214 ~~l~~~~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~-- 291 (382)
T TIGR00902 214 VCLIQGAHAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIE-- 291 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHh--
Confidence 333344444455566776678999999999999999999999999999999999999999999999999999888888
Q ss_pred cHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHH-HHHHhHHHHHHhhHHHhhhccCchHHHHHHHHHHH
Q 011529 193 GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVY-SGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGT 271 (483)
Q Consensus 193 ~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~ 271 (483)
+.+.+++.+++.|++.+...+....++.+. |+++|++..++++ ...++|..+||.++|++.++.|+ ..|++.+++.+
T Consensus 292 ~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~ 369 (382)
T TIGR00902 292 AFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAA 369 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHH
Confidence 899999999999999999999999999998 8999999999986 56789999999999999999986 66777777776
Q ss_pred HHHHH
Q 011529 272 VWFTV 276 (483)
Q Consensus 272 ~~~~~ 276 (483)
+..++
T Consensus 370 ~~~~~ 374 (382)
T TIGR00902 370 AAFFL 374 (382)
T ss_pred HHHHH
Confidence 65444
No 132
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.57 E-value=6.1e-14 Score=129.85 Aligned_cols=183 Identities=13% Similarity=0.062 Sum_probs=152.5
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhHHhhhh-hhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhc--CCchHH-HHHH
Q 011529 101 KRWFIVVLCFSAFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTV--GGKAVL-GFGV 176 (483)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~--g~r~~~-~~~~ 176 (483)
.+.+.++.+++++++.+..+..+.-+.|. +.|..|.|..+.++..+.+-++.+.+.+++|+++||+ |||..+ ++.+
T Consensus 249 L~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~ 328 (448)
T COG2271 249 LKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFM 328 (448)
T ss_pred HcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHH
Confidence 34457788889999999999999888887 7778899999999999999999999999999999996 666654 4455
Q ss_pred HHHHHHHHHhhhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHh-HHHHHHhhHHHhhh
Q 011529 177 VWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYL-GSVTGLAFSPFLIH 255 (483)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~~~l~~ 255 (483)
+...++.+...+.++.|++...++.++.|+..-+..-.......|..|++-.|++.|+...+..+ |...+....+++.+
T Consensus 329 ~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d 408 (448)
T COG2271 329 LLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIAD 408 (448)
T ss_pred HHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEe
Confidence 55555666666666556788899999999988777777778889999999999999999999999 99999999999999
Q ss_pred ccCchHHHHHHHHHHHHHHHHHHHhccC
Q 011529 256 RFGWPSVFYSFGSLGTVWFTVWLSKAHS 283 (483)
Q Consensus 256 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (483)
.+||...|.+..+.++++.++.+.....
T Consensus 409 ~~gW~g~Fi~~~~~a~l~~lll~~~~~~ 436 (448)
T COG2271 409 TWGWDGGFIVLSIAALLAILLLLPVWNA 436 (448)
T ss_pred cCCCcchHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999998887777776665554443
No 133
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.56 E-value=5.3e-13 Score=129.91 Aligned_cols=338 Identities=16% Similarity=0.103 Sum_probs=215.8
Q ss_pred HHHHHHHHHHHHHhhhhhhhHHhhhhhhhhcCCChh-hHHHHHH----HHHHHHHHHHhhHHHHHhhcCCchHHHHHHHH
Q 011529 104 FIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPA-TVGLIQS----SFFWGYLLTQIAGGIWADTVGGKAVLGFGVVW 178 (483)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~-~~g~~~~----~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 178 (483)
......++-.+..++.........+.....++.+.. ..+.... ...+...+..+..|.++||+|||..+....+.
T Consensus 22 ~~~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~ 101 (463)
T KOG2816|consen 22 HLEPLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRYGRKVVLLLPLFG 101 (463)
T ss_pred HHHHHHHHHHHHHHhcCcchhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhhhhhhhHHHHHHH
Confidence 344444444555555554455555555555543322 2233333 33678889999999999999999999999988
Q ss_pred HHHHHHHhhhhhcccHHHHHHHHHHHhhh--hhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhc
Q 011529 179 WSIATALTPVAAKLGLPFLLVVRVFMGIG--EGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR 256 (483)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~l~~~~~l~G~~--~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 256 (483)
..+..+...+.. +|.++ +.++. .+.......++++|....++|...+|+.+.....+..++|.+++.+.+.
T Consensus 102 ~~l~~~~~~~~~---~~~~~----~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~ 174 (463)
T KOG2816|consen 102 TILPALCLLFQG---YWFFL----LLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKF 174 (463)
T ss_pred HHHhHHHHHHHH---HHHhh----hcccccchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 888877766653 44433 33332 2445677889999999999999999999999999999999999999999
Q ss_pred cCchHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCChhhHHHh-hhcccCCCCCcccchhhhhcChhHHHHHHHHHHHHH
Q 011529 257 FGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLI-VSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNW 335 (483)
Q Consensus 257 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (483)
.|.-..|.+..+..++..+..+...|++..+++.......+.. ...............+..-++|..+.+.+..++...
T Consensus 175 ~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~ 254 (463)
T KOG2816|consen 175 LGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLRELTPGSLDSSHVADAFQSLTKVGPDRLLLLLLLVAFLSSL 254 (463)
T ss_pred cCchHHHHHHHHHHHHHHHHHhhccccccCccccccccccccCCCcccchhhhhhhhhhcccCCCccchHHHHHHHHHHH
Confidence 9999999999999998888888888876554443310000000 000000000001111112234555555555555444
Q ss_pred HHHHHHH-hhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHH-HHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHh
Q 011529 336 GTFILLT-WMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGG-WIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQL 413 (483)
Q Consensus 336 ~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g-~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (483)
....-.. ..+.|++..+++++.+.+.+.+..+....++.++.. .+...++.++ .+..++..-.+.....
T Consensus 255 ~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~---------~i~lGl~~~~~~~~~~ 325 (463)
T KOG2816|consen 255 PEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKR---------LISLGLLSEFLQLLLF 325 (463)
T ss_pred HHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh---------HhhHHHHHHHHHHHHH
Confidence 4433222 457788888999999999999999988888888866 6777777763 4445555555555554
Q ss_pred hccchhHHHHHHHHHhhhhhhhhhchhhhhHhh-hccCcceeeeee
Q 011529 414 SHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQD-IAPRYSVSIISI 458 (483)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~g~ 458 (483)
......|.......+... .....+...+.... ..++++|.++++
T Consensus 326 af~~~~w~~~~~~v~~~~-~~~~~pa~~s~~s~~v~~~e~g~v~~~ 370 (463)
T KOG2816|consen 326 AFATETWMMFAAGVVVAL-AGIVFPAIRAFASILVSPEEQGKVFGI 370 (463)
T ss_pred HHhccchhhhHHHHHHHh-hcchhHHHHhHHHhhcccccccchhhH
Confidence 455444443333333332 23344555555554 457788998874
No 134
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.56 E-value=1.2e-13 Score=135.72 Aligned_cols=160 Identities=17% Similarity=0.165 Sum_probs=131.2
Q ss_pred hhHHhhhhhhhhcCCChh----hHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhcccHHHH
Q 011529 122 NMSIAILPMSAEFNWNPA----TVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFL 197 (483)
Q Consensus 122 ~~~~~~~~~~~~~g~s~~----~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l 197 (483)
...+.++.+.++.+.+.. ..+.+.++..++..++.+..|++.||+|||+.+..+.++..++.+...+.+ +.+.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 314 (408)
T PRK09874 237 SIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQ--TPLQL 314 (408)
T ss_pred HHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhc--cHHHH
Confidence 344455555444333322 346666777888889999999999999999999988888877777766666 78888
Q ss_pred HHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHHHH
Q 011529 198 LVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVW 277 (483)
Q Consensus 198 ~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~ 277 (483)
++.+++.|++.+...+...+.+.+..|++++++.+++.+....+|..+||.++|.+.+..||++.|++.+++.++..+..
T Consensus 315 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~ 394 (408)
T PRK09874 315 GILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYS 394 (408)
T ss_pred HHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999998888877666
Q ss_pred HHhccC
Q 011529 278 LSKAHS 283 (483)
Q Consensus 278 ~~~~~~ 283 (483)
+...++
T Consensus 395 ~~~~~~ 400 (408)
T PRK09874 395 WNSLRR 400 (408)
T ss_pred HHHHHH
Confidence 554433
No 135
>PRK12382 putative transporter; Provisional
Probab=99.55 E-value=4.4e-13 Score=131.01 Aligned_cols=155 Identities=19% Similarity=0.194 Sum_probs=130.9
Q ss_pred hhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhcccHHHHHHHH
Q 011529 122 NMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVR 201 (483)
Q Consensus 122 ~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 201 (483)
......+.+.++.+.+. .++....+.++..+++++.|++.||+|+|+.+..+..+.+++.++..+.+ +.+.+++..
T Consensus 234 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 309 (392)
T PRK12382 234 VIGTFVSLYFASKGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAP--TAWVALAGA 309 (392)
T ss_pred HHHHHHHHHHHhcCCch--hHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcc--cHHHHHHHH
Confidence 34445555556666653 45666778888889999999999999999999999888888887777776 777888889
Q ss_pred HHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHHHHHHh
Q 011529 202 VFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSK 280 (483)
Q Consensus 202 ~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 280 (483)
++.|++.+...+...+.+.+.+|+++|++++|+.+....+|..++|.+.+.+.++.||+..|.+.+++.++..+..+..
T Consensus 310 ~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 310 ALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred HHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHhh
Confidence 9999999888888888999999999999999999999999999999999999999999999999988887776665544
No 136
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.54 E-value=2.2e-13 Score=134.27 Aligned_cols=160 Identities=13% Similarity=0.044 Sum_probs=135.9
Q ss_pred hHHhhhhhhhh-cCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhcccHHHHHHHH
Q 011529 123 MSIAILPMSAE-FNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVR 201 (483)
Q Consensus 123 ~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 201 (483)
+....|.+.++ +|.++.+.|++.+...++..++.++.+++.||.++++.+..+.++.+++.++..+.+ +.+...++.
T Consensus 242 ~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 319 (417)
T PRK10489 242 VRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMP--MWILAVLCL 319 (417)
T ss_pred HHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccc--hHHHHHHHH
Confidence 34456766555 899999999999999999999999999999998888888888888888877777776 777778888
Q ss_pred HHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHHHHHHhc
Q 011529 202 VFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKA 281 (483)
Q Consensus 202 ~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 281 (483)
++.|++.+...+...+++.+..|++.|++++|+++....+|..+||.+.|.+.+..|++..+++.+++.++..++.....
T Consensus 320 ~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 399 (417)
T PRK10489 320 ALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVL 399 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhc
Confidence 89999888777888889999999999999999999999999999999999999999999888888877766666655554
Q ss_pred cCC
Q 011529 282 HSS 284 (483)
Q Consensus 282 ~~~ 284 (483)
++.
T Consensus 400 ~~~ 402 (417)
T PRK10489 400 GEL 402 (417)
T ss_pred ccc
Confidence 443
No 137
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.54 E-value=6.4e-13 Score=129.78 Aligned_cols=167 Identities=15% Similarity=0.021 Sum_probs=120.8
Q ss_pred HHHHHHHHhhhhhhhHHhhhh-hhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCch--HHHH------HHHHH
Q 011529 109 CFSAFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKA--VLGF------GVVWW 179 (483)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~--~~~~------~~~~~ 179 (483)
..+..++.......+....|. +.+++|.+..+.+++.+...++..++.++.|++.||++||+ .... +.++.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (399)
T TIGR00893 220 LALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVL 299 (399)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHH
Confidence 344444445555556666666 45668999999999999999999999999999999999996 1111 11111
Q ss_pred HHHHHHhhhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccC-
Q 011529 180 SIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG- 258 (483)
Q Consensus 180 ~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g- 258 (483)
.+........+ +.+..+....+.+++.+ ..+...+++.|.+|+++|++++|+.+....+|..++|.+.+.+.+..|
T Consensus 300 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~ 376 (399)
T TIGR00893 300 SLLMFATNYVN--IPYAALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGS 376 (399)
T ss_pred HHHHHHhccch--hHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCc
Confidence 11111111122 33344444444444444 788899999999999999999999999999999999999999999988
Q ss_pred chHHHHHHHHHHHHHHHHHH
Q 011529 259 WPSVFYSFGSLGTVWFTVWL 278 (483)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~ 278 (483)
|+..+++.+++.++..+..+
T Consensus 377 ~~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 377 FAGALMVVAALALIGALSYL 396 (399)
T ss_pred hhHHHHHHHHHHHHHHHHHH
Confidence 99999988877776655544
No 138
>PRK03545 putative arabinose transporter; Provisional
Probab=99.54 E-value=6.8e-13 Score=129.55 Aligned_cols=152 Identities=15% Similarity=0.066 Sum_probs=124.0
Q ss_pred hhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHH-hhhhhcccHHHHHHHHHHHh
Q 011529 127 ILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATAL-TPVAAKLGLPFLLVVRVFMG 205 (483)
Q Consensus 127 ~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~l~G 205 (483)
.|.+.++.|.+..+.+++.+...++..++.++.|++.||+++|+.. .+..+..++... ....+ +.+.++++.++.|
T Consensus 229 ~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~-~~~~~~~~~~~~l~~~~~--~~~~~~~~~~l~g 305 (390)
T PRK03545 229 EPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLL-IAIALLLVCLLLLLPAAN--SEWHLSVLSIFWG 305 (390)
T ss_pred HHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHH-HHHHHHHHHHHHHHHHhc--hHHHHHHHHHHHH
Confidence 3445666899999999999999999999999999999999987654 444444444333 33444 6777888889999
Q ss_pred hhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHHHHHHhcc
Q 011529 206 IGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAH 282 (483)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 282 (483)
++.+...+...+.+.+..| ++|++++|+.+....+|..+||.++|.+.+++|++..|++.+.+.++..+......+
T Consensus 306 ~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (390)
T PRK03545 306 IAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIFR 381 (390)
T ss_pred HHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHcc
Confidence 9887777777888888875 688999999999999999999999999999999999999999888887776666554
No 139
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.54 E-value=6.9e-14 Score=140.35 Aligned_cols=182 Identities=12% Similarity=0.059 Sum_probs=134.9
Q ss_pred HHHHHHHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHH
Q 011529 103 WFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIA 182 (483)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 182 (483)
+..+....+..+.............|.+.+++|.+..+.++......++..++.++.|+++||+|||+.+.++.++.+++
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 362 (481)
T TIGR00879 283 RRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAIC 362 (481)
T ss_pred HHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 33444444444444444445566678888889999988999999999999999999999999999999999888877777
Q ss_pred HHHhhh---hhcc------cHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHh
Q 011529 183 TALTPV---AAKL------GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFL 253 (483)
Q Consensus 183 ~~~~~~---~~~~------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 253 (483)
.+++.+ .... +...+....++.+.......+....++.|.+|+++|++++++.+....+|.+++|.+.+.+
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~ 442 (481)
T TIGR00879 363 LFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTM 442 (481)
T ss_pred HHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666552 1110 1122222222222222233466677889999999999999999999999999999999999
Q ss_pred hhccCchHHHHHHHHHHHHHHHHHHHhccCC
Q 011529 254 IHRFGWPSVFYSFGSLGTVWFTVWLSKAHSS 284 (483)
Q Consensus 254 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (483)
.++.+|++.|++.++++++..++.++..+++
T Consensus 443 ~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~ 473 (481)
T TIGR00879 443 LESIGVGGVFIFFGGLNVLGLIFVYFFLPET 473 (481)
T ss_pred HHhcCccceehhHHHHHHHHHHHHheecccC
Confidence 9989999999998888887777766655543
No 140
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.53 E-value=7.1e-13 Score=128.73 Aligned_cols=152 Identities=13% Similarity=0.065 Sum_probs=126.5
Q ss_pred Hhhhh-hhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhcccHHHHHHHHHH
Q 011529 125 IAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVF 203 (483)
Q Consensus 125 ~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l 203 (483)
..+|. +.+++|.++.+.+++.+...+...++.++.|++.||+|||+++.++.++..+......+.+ +.+.+++.+++
T Consensus 220 ~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 297 (375)
T TIGR00899 220 INMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADN--SLWALLMLQLL 297 (375)
T ss_pred hhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHH
Confidence 34454 5577899999999998888888888899999999999999998888776666655555555 67778888899
Q ss_pred HhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHHHHHH
Q 011529 204 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLS 279 (483)
Q Consensus 204 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 279 (483)
.|++.+...+....++.|..|+ ++++++++.+....+|..++|.++|.+.+..||+..|++.+++.++..+...+
T Consensus 298 ~g~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 372 (375)
T TIGR00899 298 NAIFIGILAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLLL 372 (375)
T ss_pred HHHHHHHHHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhe
Confidence 9999888888888899998864 66799999999999999999999999999999999999888877776665543
No 141
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.53 E-value=5.8e-13 Score=127.81 Aligned_cols=164 Identities=25% Similarity=0.385 Sum_probs=145.5
Q ss_pred HHHHhhhhhhhHHhhhhhhhhc-CCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCch-HHHHHHHHHHHHHHHhhhhh
Q 011529 113 FLLCNMDRVNMSIAILPMSAEF-NWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKA-VLGFGVVWWSIATALTPVAA 190 (483)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~-g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~-~~~~~~~~~~~~~~~~~~~~ 190 (483)
.+.............|.+.++. |.+..+.++..+...++..++.++.+++.||+|||+ .+..+.++..++.+.....+
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 263 (352)
T cd06174 184 FFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAP 263 (352)
T ss_pred HHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhc
Confidence 3444445555666677755554 999999999999999999999999999999999999 99999999999998888887
Q ss_pred cccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHHHHHHH
Q 011529 191 KLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLG 270 (483)
Q Consensus 191 ~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~ 270 (483)
+.+.+.+..++.|++.+...+...+++.|..|+++|++.+++.+....+|..++|.+.+.+.+..+|+..+.+.+++.
T Consensus 264 --~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~ 341 (352)
T cd06174 264 --SLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALA 341 (352)
T ss_pred --cHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHH
Confidence 788899999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred HHHHHHHH
Q 011529 271 TVWFTVWL 278 (483)
Q Consensus 271 ~~~~~~~~ 278 (483)
++..+...
T Consensus 342 ~i~~i~~~ 349 (352)
T cd06174 342 LLAALLLL 349 (352)
T ss_pred HHHHHHhe
Confidence 87766543
No 142
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.52 E-value=4.1e-13 Score=133.62 Aligned_cols=173 Identities=12% Similarity=0.035 Sum_probs=117.6
Q ss_pred HHHHHHHhhhhhhhHHhhhhhh-hhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhc--CCchHH-HHHHHHHHHHHHH
Q 011529 110 FSAFLLCNMDRVNMSIAILPMS-AEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTV--GGKAVL-GFGVVWWSIATAL 185 (483)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~--g~r~~~-~~~~~~~~~~~~~ 185 (483)
.+..++..........++|.+. ++.|.+..+.+++..++.++..++.++.|+++||+ +||+.. +....+..++.++
T Consensus 259 ~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~ 338 (452)
T PRK11273 259 AIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIV 338 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHH
Confidence 3333333333444556677755 45799999999999999999999999999999999 555432 2222333333333
Q ss_pred hhhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHH-HHhhHHHhhhccCchHHHH
Q 011529 186 TPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVT-GLAFSPFLIHRFGWPSVFY 264 (483)
Q Consensus 186 ~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~-g~~~~~~l~~~~g~~~~~~ 264 (483)
+.+.+..+.+..++..++.|.+..........+..|.+|+++|++++|+.+....+|..+ +|.+.|.+.++.||+..|+
T Consensus 339 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~ 418 (452)
T PRK11273 339 YWLNPAGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFM 418 (452)
T ss_pred HHHhcccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHH
Confidence 222221144444455555565433333334456789999999999999999988888654 7999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcc
Q 011529 265 SFGSLGTVWFTVWLSKAH 282 (483)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~ 282 (483)
+.++.+++..+.......
T Consensus 419 ~~~~~~~~~~~~~~~~~~ 436 (452)
T PRK11273 419 VMIGGSILAVILLIVVMI 436 (452)
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 888877776665554433
No 143
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.52 E-value=1.4e-12 Score=126.90 Aligned_cols=153 Identities=16% Similarity=0.134 Sum_probs=125.6
Q ss_pred hHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhcccHHHHHHHHH
Q 011529 123 MSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRV 202 (483)
Q Consensus 123 ~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 202 (483)
...++|.+.++.|.++.+.+++.+...++..+++++.|++.||+|+|+++..+..+..++.+... . . .......+
T Consensus 219 ~~~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~--~-~~~~~~~~ 293 (381)
T PRK03633 219 LYGLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S--Q-AAMAPALF 293 (381)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h--h-HHHHHHHH
Confidence 33456777777899999999999999999999999999999999999999888877777665432 2 2 22334566
Q ss_pred HHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHHHHHHh
Q 011529 203 FMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSK 280 (483)
Q Consensus 203 l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 280 (483)
+.|++.....|...+.+.|..|+++++...+..+...++|..+||.++|++.++.+|++.|.+.+.+.++..+..++.
T Consensus 294 l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~ 371 (381)
T PRK03633 294 ILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLMLLRK 371 (381)
T ss_pred HHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHhc
Confidence 777777777899999999999888888888888899999999999999999999999999999888887665555443
No 144
>PRK03699 putative transporter; Provisional
Probab=99.52 E-value=9.3e-13 Score=128.71 Aligned_cols=166 Identities=12% Similarity=0.126 Sum_probs=132.5
Q ss_pred HHHHHhhhhhhhHHhhhhhh-hhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhh
Q 011529 112 AFLLCNMDRVNMSIAILPMS-AEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAA 190 (483)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~ 190 (483)
..++.......+..++|.+. +++|.+..+.+.+.+.+.++..++.++.|+++||+++|+.+.....+..+...+....+
T Consensus 213 ~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~ 292 (394)
T PRK03699 213 AALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTD 292 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcC
Confidence 33333334444556677755 67899999999999999999999999999999999999998887777776666665565
Q ss_pred cccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHHHHHHH
Q 011529 191 KLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLG 270 (483)
Q Consensus 191 ~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~ 270 (483)
+.+.+.+..++.|++.+..++...++..+..| +++++..+.......+|..++|.+.|.+.+..|++..+++.+++.
T Consensus 293 --~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~ 369 (394)
T PRK03699 293 --DPSHLLYAILGLGFFSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLY 369 (394)
T ss_pred --CchHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHH
Confidence 66667777888898888788888888888774 556788899999999999999999999999999999999888877
Q ss_pred HHHHHHHHHh
Q 011529 271 TVWFTVWLSK 280 (483)
Q Consensus 271 ~~~~~~~~~~ 280 (483)
+++.+.+...
T Consensus 370 ~~~~~~~~~~ 379 (394)
T PRK03699 370 AVVFVMCILL 379 (394)
T ss_pred HHHHHHHHHH
Confidence 7765544443
No 145
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.51 E-value=2.2e-12 Score=125.95 Aligned_cols=166 Identities=14% Similarity=0.010 Sum_probs=129.0
Q ss_pred hhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhcccHHH
Q 011529 117 NMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPF 196 (483)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (483)
.........++|.+.+++|.+..+.|...+.+.++..++.++.|++.||+|||+.+..+..+..++.++....+. +...
T Consensus 218 ~~~~~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~ 296 (393)
T PRK09705 218 NGGYASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPL-QLPV 296 (393)
T ss_pred HHHHHHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccc-hHHH
Confidence 334444555677766778999999999999999999999999999999999999988888777777665543331 2222
Q ss_pred HHHHHHHHhhhhhcchhHHHHHHhhhcC-CcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccC-chHHHHHHHHHHHHHH
Q 011529 197 LLVVRVFMGIGEGVAMPAMNNILSKWVP-VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG-WPSVFYSFGSLGTVWF 274 (483)
Q Consensus 197 l~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-~~~~~~~~~~~~~~~~ 274 (483)
+ ..++.|++.+...+.......+..+ ++++++.+|+.+....++..++|.+.|++.+..| |...|.+.++.+++..
T Consensus 297 ~--~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~ 374 (393)
T PRK09705 297 L--WAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLM 374 (393)
T ss_pred H--HHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHH
Confidence 2 2345678877778877777777775 5789999999999999999999999999999876 7777888777777766
Q ss_pred HHHHHhccCCC
Q 011529 275 TVWLSKAHSSP 285 (483)
Q Consensus 275 ~~~~~~~~~~~ 285 (483)
+....+.++++
T Consensus 375 ~~~~~~~~~~~ 385 (393)
T PRK09705 375 IITLRFAPARF 385 (393)
T ss_pred HHHHHhccccc
Confidence 66666665543
No 146
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.51 E-value=8.4e-13 Score=130.63 Aligned_cols=173 Identities=10% Similarity=0.001 Sum_probs=117.6
Q ss_pred HHHHHHhhhhhhhHHhhhhhh-hhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhc--CCchHH-HHHHHHHHHHHHHh
Q 011529 111 SAFLLCNMDRVNMSIAILPMS-AEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTV--GGKAVL-GFGVVWWSIATALT 186 (483)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~--g~r~~~-~~~~~~~~~~~~~~ 186 (483)
+..+........+..++|.+. +++|.+..+.+...+...++..++.++.|+++||+ ++|+.. ....+...+.....
T Consensus 250 ~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~ 329 (434)
T PRK11663 250 FSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSL 329 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHH
Confidence 334444444444555667654 67899999999999999999999999999999998 333332 22111111111111
Q ss_pred hhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHHH
Q 011529 187 PVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSF 266 (483)
Q Consensus 187 ~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~ 266 (483)
...+..+.....+..+..|++...........+.|.+|+++|++++|+.+....+|..++|.+.|++.++.||+..|++.
T Consensus 330 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~ 409 (434)
T PRK11663 330 WLMPFASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVI 409 (434)
T ss_pred HHcccccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHH
Confidence 11111133333344444555433223334456789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccC
Q 011529 267 GSLGTVWFTVWLSKAHS 283 (483)
Q Consensus 267 ~~~~~~~~~~~~~~~~~ 283 (483)
+++.++..+..+...++
T Consensus 410 ~~~~~~~~~~~~~~~~~ 426 (434)
T PRK11663 410 SIAAGISALLLLPFLNA 426 (434)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 88887776666554443
No 147
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.51 E-value=1.5e-13 Score=136.57 Aligned_cols=161 Identities=14% Similarity=0.159 Sum_probs=127.7
Q ss_pred HHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhc--CCchHHHH--HHHHHHHHHHHhhh
Q 011529 113 FLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTV--GGKAVLGF--GVVWWSIATALTPV 188 (483)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~--g~r~~~~~--~~~~~~~~~~~~~~ 188 (483)
.++...........+|.+.+++|.+..+.+++.++..++..+++++.|++.||. ++|+...+ +.++.+++.++..+
T Consensus 250 ~~l~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~ 329 (455)
T TIGR00892 250 NVIMFLGFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCAL 329 (455)
T ss_pred HHHHHHHccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333434444556776778899999999999999999999999999999974 33433333 33333444445555
Q ss_pred hhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhcc-CchHHHHHHH
Q 011529 189 AAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF-GWPSVFYSFG 267 (483)
Q Consensus 189 ~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-g~~~~~~~~~ 267 (483)
.+ +++.+++.+++.|++.+...+...+++.|.+|++++++.+|+++....+|..+||.++|.+.+.. +|++.|++.+
T Consensus 330 ~~--~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~ 407 (455)
T TIGR00892 330 AG--DYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASG 407 (455)
T ss_pred hc--hHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhh
Confidence 66 78888889999999999888999999999999999999999999999999999999999999887 4999999888
Q ss_pred HHHHHHHH
Q 011529 268 SLGTVWFT 275 (483)
Q Consensus 268 ~~~~~~~~ 275 (483)
++.++..+
T Consensus 408 ~~~li~~~ 415 (455)
T TIGR00892 408 SIVVSAGL 415 (455)
T ss_pred HHHHHHHH
Confidence 77666544
No 148
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.50 E-value=2.4e-12 Score=120.80 Aligned_cols=176 Identities=14% Similarity=0.176 Sum_probs=142.7
Q ss_pred HHHHHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHH
Q 011529 105 IVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATA 184 (483)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 184 (483)
+...+....+.....+..+.+.-|.+.+..|.+...++++..++.++..+++.+.|++.|| +.|+.+....++.++..+
T Consensus 213 v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l 291 (394)
T COG2814 213 VLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALL 291 (394)
T ss_pred HHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHH
Confidence 3444444444445556667777888999999999999999999999999999999999999 889988888888777777
Q ss_pred HhhhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHH
Q 011529 185 LTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFY 264 (483)
Q Consensus 185 ~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~ 264 (483)
.+.+... +.+..++..++.|+............+.+ ..+|.++.+.+++....++|..+|..++|.+.+++|+....+
T Consensus 292 ~l~~~~~-~~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~ 369 (394)
T COG2814 292 ALTFTGA-SPALALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGW 369 (394)
T ss_pred HHHHhcc-hHHHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHH
Confidence 7666552 55667777777888777666666666666 337899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhccC
Q 011529 265 SFGSLGTVWFTVWLSKAHS 283 (483)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~ 283 (483)
+.+++.++..++.+...+.
T Consensus 370 ~~a~l~~~a~~~~~~~~~~ 388 (394)
T COG2814 370 VGAALLLLALLLALLSARK 388 (394)
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 9999888887776655443
No 149
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.49 E-value=2.6e-10 Score=107.77 Aligned_cols=327 Identities=11% Similarity=0.057 Sum_probs=219.5
Q ss_pred Hhhhhhhhh-cCCChhhHH-HHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhcccHHHHHHHHH
Q 011529 125 IAILPMSAE-FNWNPATVG-LIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRV 202 (483)
Q Consensus 125 ~~~~~~~~~-~g~s~~~~g-~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 202 (483)
...|.+.+. .|++..|+. -+.-+..-.+....++...+.|..+.|++++++.+...+...++.+.+ +.+.+-+..+
T Consensus 25 fl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~--sv~~mq~~q~ 102 (412)
T PF01770_consen 25 FLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGT--SVLAMQLMQF 102 (412)
T ss_pred cchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHC--cHHHHHHHHH
Confidence 345555555 789988875 455555566777888899999999999999999999999998888888 9999999999
Q ss_pred HHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhc--cCchHHHHHHHHHHHHHHHHHHHh
Q 011529 203 FMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR--FGWPSVFYSFGSLGTVWFTVWLSK 280 (483)
Q Consensus 203 l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~--~g~~~~~~~~~~~~~~~~~~~~~~ 280 (483)
+.|++.+. ..+..+++-...|+++-.++.+...+...+|..++.+++-.++.. .+++....+......++.++.+++
T Consensus 103 ~yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fL 181 (412)
T PF01770_consen 103 FYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFL 181 (412)
T ss_pred HHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHc
Confidence 99999765 678889999999999999999999999999999999999888763 345555555444444444444444
Q ss_pred ccCCCCC---CCCC--------ChhhHHHhhhcc---cCCCCCc-----------ccchhhhhcChhHHHHHHHHHHHHH
Q 011529 281 AHSSPAE---DPQL--------RPAEKKLIVSSC---ASKEPVK-----------TIPWGLILSKPPVWALIVSHFCHNW 335 (483)
Q Consensus 281 ~~~~~~~---~~~~--------~~~~~~~~~~~~---~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (483)
++.++.. ++.. +.++.+...+.. ++.++.. ..++++..++|.++...+.+.+...
T Consensus 182 P~~~~S~~f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~atc 261 (412)
T PF01770_consen 182 PMPKRSLFFHRKPPAEQDANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFATC 261 (412)
T ss_pred CCCCcccceeccCccccccccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHh
Confidence 3322210 0000 000000000000 0000000 1234556688999888888888888
Q ss_pred HHHHHHHhhHHHHHHH--hCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHh
Q 011529 336 GTFILLTWMPTYYNQV--LHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQL 413 (483)
Q Consensus 336 ~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (483)
++..+.++.....++. .+-+....|.+-++..+.+.++.+..|++..++.+. ....+....++.+..+...
T Consensus 262 gy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~-------~~l~l~~~S~l~a~~L~lm 334 (412)
T PF01770_consen 262 GYYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRW-------GELALGVFSLLQAGLLFLM 334 (412)
T ss_pred HHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHH-------HHHHHHHHHHHHHHHHHHH
Confidence 9988888888888774 233445568888888888888899999885555443 2233333344444445555
Q ss_pred hccchhHHHHHHHHHhhhhhhhhhchhhhhHh-hhccCcceeeeeeeec
Q 011529 414 SHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQ-DIAPRYSVSIISINIL 461 (483)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~g~~~~ 461 (483)
...++.+...+..++......+..+.....+. ....+.-|..+|+|..
T Consensus 335 ~~t~~Iwv~Y~~yIif~~~y~fliTiA~~qIA~~l~~e~yaLVFGiNtf 383 (412)
T PF01770_consen 335 SFTGNIWVCYAGYIIFRSLYMFLITIASFQIAKNLSEERYALVFGINTF 383 (412)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccceeeeeeeHHH
Confidence 56666666666666555555554444444433 4556778999998865
No 150
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.49 E-value=7.2e-13 Score=130.04 Aligned_cols=140 Identities=16% Similarity=0.180 Sum_probs=114.9
Q ss_pred HHhhhh-hhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHH-HhhhhhcccHHHHHHHH
Q 011529 124 SIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATA-LTPVAAKLGLPFLLVVR 201 (483)
Q Consensus 124 ~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~ 201 (483)
...+|. +.+++|.+..+.+++.+...++..++.++.|++.||+|||+.+..+.++..+... .....+ +.+.+.+..
T Consensus 258 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 335 (405)
T TIGR00891 258 QDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGA--NVAVLGLGL 335 (405)
T ss_pred hhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCC--chHHHHHHH
Confidence 334454 5567899999999999999999999999999999999999998887766533332 222333 566666666
Q ss_pred HHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccC-chHHHHH
Q 011529 202 VFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG-WPSVFYS 265 (483)
Q Consensus 202 ~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-~~~~~~~ 265 (483)
++.|++.+...+...+++.|.+|+++|++++|+.+....+|..++|++.|.+.++.| |+..+..
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 336 FFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred HHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHh
Confidence 777777777778888999999999999999999999999999999999999999988 8766654
No 151
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.49 E-value=1.1e-12 Score=132.39 Aligned_cols=150 Identities=12% Similarity=0.135 Sum_probs=117.4
Q ss_pred hHHhhhhhh-hhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhcccHHHHHHHH
Q 011529 123 MSIAILPMS-AEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVR 201 (483)
Q Consensus 123 ~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 201 (483)
....+|.+. +++|.+..+.+++.+...++..++.++.|+++||+|||+++..+.++..+..+........+.+.+.+..
T Consensus 294 ~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (496)
T PRK03893 294 IQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLL 373 (496)
T ss_pred HHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHH
Confidence 445677755 6899999999999999999999999999999999999999888877666655444333321344444445
Q ss_pred HHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHHHHHHHHH
Q 011529 202 VFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTV 272 (483)
Q Consensus 202 ~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~ 272 (483)
++.++......+...+++.|.+|+++|++.+|+.+....+|..+||.++|.+.+.+||+..+...+....+
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~~~~ 444 (496)
T PRK03893 374 FFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFSLTF 444 (496)
T ss_pred HHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHHHHH
Confidence 55444433445677788999999999999999999999999999999999999999999887665544433
No 152
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.49 E-value=4.4e-13 Score=130.89 Aligned_cols=161 Identities=12% Similarity=0.131 Sum_probs=122.5
Q ss_pred HHHHHHhhhhhhhHHhhhhhh-hhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHH-H-Hhh
Q 011529 111 SAFLLCNMDRVNMSIAILPMS-AEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIAT-A-LTP 187 (483)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~-~-~~~ 187 (483)
...+.............|.+. +++|.+..+.+.+.....++..++.++.|++.||+|||+.+.....+..+.. . ...
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~ 305 (394)
T TIGR00883 226 GLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMA 305 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444455556667654 7789999999999999999999999999999999999998775554443332 2 222
Q ss_pred hhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHH-HHHHHHhHHHHHHhhHHHhhhccC-chHHHHH
Q 011529 188 VAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLAL-VYSGMYLGSVTGLAFSPFLIHRFG-WPSVFYS 265 (483)
Q Consensus 188 ~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~~g~~~g~~~~~~l~~~~g-~~~~~~~ 265 (483)
+....+.+.+++..++.|++.+...+...+++.|.+|+++|+++.++ .+....+|..++|.++|.+.++.| |+..++.
T Consensus 306 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~ 385 (394)
T TIGR00883 306 LLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYY 385 (394)
T ss_pred HhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHH
Confidence 22112566777778888998888889999999999999999999998 456667899999999999999888 8877666
Q ss_pred HHHHHH
Q 011529 266 FGSLGT 271 (483)
Q Consensus 266 ~~~~~~ 271 (483)
..+..+
T Consensus 386 ~~~~~l 391 (394)
T TIGR00883 386 LAALAL 391 (394)
T ss_pred HHHHHH
Confidence 555443
No 153
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.47 E-value=2e-11 Score=122.37 Aligned_cols=154 Identities=14% Similarity=0.145 Sum_probs=120.5
Q ss_pred hhhhhhhcCCChhhHHHHHH-HHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHh---hhhhcccHHHHHHHHH
Q 011529 127 ILPMSAEFNWNPATVGLIQS-SFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALT---PVAAKLGLPFLLVVRV 202 (483)
Q Consensus 127 ~~~~~~~~g~s~~~~g~~~~-~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~ 202 (483)
.|.+.+++|.+..+++++.. ...++..++.++.|+++||+|+|+.+.++.++.++..+.+ .... .+.+.+.+..+
T Consensus 246 ~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~-~~~~~l~~~~~ 324 (491)
T PRK11010 246 TTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITD-KNLYSMGAAVF 324 (491)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcc-ccHHHHHHHHH
Confidence 44456779999999999974 6678999999999999999999988776666555443322 2221 14555555566
Q ss_pred HHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHHHHHHhc
Q 011529 203 FMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKA 281 (483)
Q Consensus 203 l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 281 (483)
+..++.+...+...++..+..+++.+++..++.+....+|..+++.+.|.+.+..||+..|.+.+++.++..+.....+
T Consensus 325 l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~ 403 (491)
T PRK11010 325 FENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCR 403 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666656666777888899999999999999999999999999999999999999999999988888888766665554
No 154
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.46 E-value=4.4e-12 Score=124.29 Aligned_cols=166 Identities=16% Similarity=0.194 Sum_probs=125.6
Q ss_pred HHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHH-HHHHHHHHHHHHhhhhh-
Q 011529 113 FLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLG-FGVVWWSIATALTPVAA- 190 (483)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~-~~~~~~~~~~~~~~~~~- 190 (483)
.++............|.+.+++|.+..+.+.+.+...++..++.++.|+++||+|||+.+. .+.+...++.+.+.+.+
T Consensus 231 ~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~ 310 (402)
T TIGR00897 231 RIINTIGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQ 310 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444445556778877889999999999999999999999999999999999988764 33333333333322211
Q ss_pred --cccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHHHHH
Q 011529 191 --KLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGS 268 (483)
Q Consensus 191 --~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~ 268 (483)
..+.+..++..++.|++.+...+ ....+.+.. +++|++++|+.+....+|..++|.+++.+.+..||...+++.++
T Consensus 311 ~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~-~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~ 388 (402)
T TIGR00897 311 HFGHSFAVALIIAIALGIFLAGYVP-LAAVFPTLA-PKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAA 388 (402)
T ss_pred ccCCcHHHHHHHHHHHHHHHHHHHH-HHHHHHhhC-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHH
Confidence 11566677788888988776544 455666765 57899999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHh
Q 011529 269 LGTVWFTVWLSK 280 (483)
Q Consensus 269 ~~~~~~~~~~~~ 280 (483)
+.++..++..+.
T Consensus 389 ~~~i~~~~~~~~ 400 (402)
T TIGR00897 389 LYVVSAFLTAFI 400 (402)
T ss_pred HHHHHHHHHHHh
Confidence 877766655543
No 155
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.44 E-value=6.1e-12 Score=124.45 Aligned_cols=143 Identities=13% Similarity=0.074 Sum_probs=107.5
Q ss_pred hHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhcccHHHHHHHHH
Q 011529 123 MSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRV 202 (483)
Q Consensus 123 ~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 202 (483)
+...+|.+.++.|.++.+.+.+.+...++..++.++.|++.||+|||+.+..+.++..+..+.....+..+...+.+..+
T Consensus 250 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (426)
T PRK12307 250 IFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLF 329 (426)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHH
Confidence 44456777777899999999999999999999999999999999999998888877766655444333112222222222
Q ss_pred HHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHH
Q 011529 203 FMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYS 265 (483)
Q Consensus 203 l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~ 265 (483)
..+++.....+....++.|.+|+++|++++|+......+|..++|.+.|++.++.|+....++
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~~~~~~~ 392 (426)
T PRK12307 330 GLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAALTF 392 (426)
T ss_pred HHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcccHHHHHHH
Confidence 222222333455677889999999999999999999999999999999999998887654333
No 156
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.44 E-value=8.2e-12 Score=121.50 Aligned_cols=148 Identities=16% Similarity=0.088 Sum_probs=124.0
Q ss_pred hHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhcccHHHHHHHHH
Q 011529 123 MSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRV 202 (483)
Q Consensus 123 ~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 202 (483)
+....|.+.++.|.+..+.|.+.++..++..+..++.|++.||+|+|+.+..+.++.+++.++....+ +.+.+++..+
T Consensus 224 ~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 301 (382)
T PRK11128 224 YYGFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTT--ALPWLIVIQI 301 (382)
T ss_pred HHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhh--hHHHHHHHHH
Confidence 33445555577999999999999999999999999999999999999999999998888887777777 8888899999
Q ss_pred HHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHH-HHHHhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHH
Q 011529 203 FMGIGEGVAMPAMNNILSKWVPVAERSRSLALVY-SGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWF 274 (483)
Q Consensus 203 l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~ 274 (483)
+.|++.+...+....++.+. +++++++..++.+ ....+|..+||.++|.+.+.+|+ ..++..+++.++..
T Consensus 302 l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~~ 372 (382)
T PRK11128 302 LHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPAL 372 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHH
Confidence 99999998888888888886 5667788899876 55678889999999999999887 46666666555443
No 157
>PRK09952 shikimate transporter; Provisional
Probab=99.43 E-value=1.2e-11 Score=122.57 Aligned_cols=160 Identities=13% Similarity=0.001 Sum_probs=116.4
Q ss_pred hhhHHhhhh-hhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhh--hcccHHHH
Q 011529 121 VNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVA--AKLGLPFL 197 (483)
Q Consensus 121 ~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~l 197 (483)
.....+.|. +.+++|.+......+..+..+...++.++.|+++||+|||+++..+.++..++.+.+... ...+.+.+
T Consensus 267 ~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (438)
T PRK09952 267 YIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIV 346 (438)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHH
Confidence 334444554 556788888776666666777778889999999999999999888876665544333221 11134444
Q ss_pred HHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHH-HHhHHHHHHhhHHHhhhcc--CchHHHHHHHHHHHHHH
Q 011529 198 LVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSG-MYLGSVTGLAFSPFLIHRF--GWPSVFYSFGSLGTVWF 274 (483)
Q Consensus 198 ~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-~~~g~~~g~~~~~~l~~~~--g~~~~~~~~~~~~~~~~ 274 (483)
++..++.+++.+...+...+++.|.+|.+.|+.+.++.+.. ..+|+.++|.+.+++.+.. +|...+...++..++..
T Consensus 347 ~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~ 426 (438)
T PRK09952 347 FFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISA 426 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHH
Confidence 55667778888877888899999999999999999985544 5589999999999998743 48888777777777666
Q ss_pred HHHHHh
Q 011529 275 TVWLSK 280 (483)
Q Consensus 275 ~~~~~~ 280 (483)
+..+..
T Consensus 427 v~~~~~ 432 (438)
T PRK09952 427 MTALLM 432 (438)
T ss_pred HHHHHc
Confidence 555443
No 158
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.41 E-value=1.3e-11 Score=123.07 Aligned_cols=155 Identities=15% Similarity=0.164 Sum_probs=138.4
Q ss_pred hHHhhhhhh-hhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhcccHHHHHHHH
Q 011529 123 MSIAILPMS-AEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVR 201 (483)
Q Consensus 123 ~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 201 (483)
+...+|.+. +++|.++...|++.++..+|.+++.++.+++.+|+++++++..+.++.+++.+.+++.+ +.+..++..
T Consensus 237 ~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~--~~~~~~~~l 314 (524)
T PF05977_consen 237 VWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSP--SFWLALIAL 314 (524)
T ss_pred HHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcch--HHHHHHHHH
Confidence 344577754 66899999999999999999999999999999999999999999999999999999988 889889999
Q ss_pred HHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHHHHHH
Q 011529 202 VFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLS 279 (483)
Q Consensus 202 ~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 279 (483)
++.|++.........+.+.+..|++.||+.++++++....+..+|..+.|.+.+.+|.+..+.+.++..++..++...
T Consensus 315 ~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~~ 392 (524)
T PF05977_consen 315 FLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIALR 392 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999888999999999999999999999999999999999999999999999999988877766555554443
No 159
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.40 E-value=1.4e-11 Score=119.28 Aligned_cols=191 Identities=13% Similarity=0.053 Sum_probs=144.1
Q ss_pred cccCChhHHHHHHHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHH
Q 011529 96 WEEFPKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFG 175 (483)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~ 175 (483)
.+++..|+.....+.+....+.-+......+...+.++-|++..+.-++.....+...+..+++..+.||+|||++++.+
T Consensus 262 ~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~ 341 (485)
T KOG0569|consen 262 LKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLIS 341 (485)
T ss_pred hcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHH
Confidence 33444455555555555555555555566666778889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhcc--cH--H---HHHHHHHHHhhhhh-cchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHH
Q 011529 176 VVWWSIATALTPVAAKL--GL--P---FLLVVRVFMGIGEG-VAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGL 247 (483)
Q Consensus 176 ~~~~~~~~~~~~~~~~~--~~--~---~l~~~~~l~G~~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 247 (483)
..++.+..+++...... .. | ..+++.++..++.+ +..|..+-+.+|++|++.|..++++......+...+-.
T Consensus 342 ~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~ 421 (485)
T KOG0569|consen 342 LSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVG 421 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHH
Confidence 99988887766543210 11 1 12333333333332 23578889999999999999999999999999998888
Q ss_pred hhHHHhhhccCchHHHHHHHHHHHHHHHHHHHhccCCCCC
Q 011529 248 AFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAE 287 (483)
Q Consensus 248 ~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (483)
..-..+.+.+|- ..|+...+.+++..+..++..||++.+
T Consensus 422 ~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPETkgr 460 (485)
T KOG0569|consen 422 FAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPETKGR 460 (485)
T ss_pred HHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcccCCC
Confidence 888888887776 778888888888888888888887544
No 160
>TIGR00895 2A0115 benzoate transport.
Probab=99.39 E-value=3.5e-12 Score=124.78 Aligned_cols=142 Identities=13% Similarity=0.169 Sum_probs=113.5
Q ss_pred HHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhh
Q 011529 110 FSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVA 189 (483)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 189 (483)
.+..++..........+.|.+.+++|.+..+.+++.+...++..++.++.|++.||+|+|+.+....+......++....
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (398)
T TIGR00895 256 WLLYFMLLVGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGSTL 335 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHh
Confidence 33333444444455566778888999999999999999999999999999999999999955444433333333333324
Q ss_pred hcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHh
Q 011529 190 AKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFL 253 (483)
Q Consensus 190 ~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 253 (483)
. +.+..++..++.|++.+...+...+++.|.+|+++|++++|+.+....+|..+||.++|.+
T Consensus 336 ~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 336 F--SPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred h--CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 4 6777788889999999999999999999999999999999999999999999999999876
No 161
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.39 E-value=3.7e-11 Score=118.43 Aligned_cols=176 Identities=14% Similarity=0.094 Sum_probs=141.1
Q ss_pred HHHHHHHHHHHHHhhh-hhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCc--hHHHHHHHHHH
Q 011529 104 FIVVLCFSAFLLCNMD-RVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGK--AVLGFGVVWWS 180 (483)
Q Consensus 104 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r--~~~~~~~~~~~ 180 (483)
+.+...++++++..-+ .+..........+++|++..+...+..+..+..+++.+++|++.||+|.| +++..+.++..
T Consensus 281 ~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~ 360 (477)
T PF11700_consen 281 RQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWI 360 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHH
Confidence 3444444444443333 33344444556679999999999999999999999999999999999999 88887777764
Q ss_pred HHHHHhhh--------hhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHH
Q 011529 181 IATALTPV--------AAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPF 252 (483)
Q Consensus 181 ~~~~~~~~--------~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 252 (483)
+..+...+ .+ +.+.+.+..++.|++.|..++...++.+++.|+++.+..+|++.........+||++.|.
T Consensus 361 ~i~~~g~~G~~~~~~g~~--~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~ 438 (477)
T PF11700_consen 361 IIPLYGLFGFWPSFFGLK--SPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGL 438 (477)
T ss_pred HHHHHHHHHhhhcccCcc--cHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44443333 33 678899999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccC-chHHHHHHHHHHHHHHHHHHHhc
Q 011529 253 LIHRFG-WPSVFYSFGSLGTVWFTVWLSKA 281 (483)
Q Consensus 253 l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~ 281 (483)
+.+..| -|..+....++.++.+++.+...
T Consensus 439 i~~~tg~~r~g~~~l~~lf~~gl~ll~~v~ 468 (477)
T PF11700_consen 439 ITDATGSQRYGFLFLLVLFLIGLILLFFVD 468 (477)
T ss_pred HHHHhCCchhHHHHHHHHHHHHHHHHhhcc
Confidence 999876 88888888777777766665443
No 162
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.38 E-value=2e-11 Score=119.45 Aligned_cols=141 Identities=8% Similarity=0.060 Sum_probs=120.3
Q ss_pred CCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhcccHHHHHHHHHHHhhhhhcchhH
Q 011529 135 NWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPA 214 (483)
Q Consensus 135 g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~ 214 (483)
+.+....|++.++..+...++.+..|++.||+|+|+.+.++.++.++...+....+ +.+.+++.+++.|++.......
T Consensus 250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~--~~~~~~~~~~l~g~~~~~~~~~ 327 (396)
T TIGR00882 250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFAT--TALEVVILKMLHAFEVPFLLVG 327 (396)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcC--ChHHHHHHHHHHHHHHHHHHHH
Confidence 55667889999999999999999999999999999999999988888877767777 8888888899999987766666
Q ss_pred HHHHHhhhcCCcchhHHHHH-HHHHHHhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHHHH
Q 011529 215 MNNILSKWVPVAERSRSLAL-VYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVW 277 (483)
Q Consensus 215 ~~~~~~~~~~~~~r~~~~~~-~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~ 277 (483)
...+..+..+++.++...+. .+....+|..+++.++|++.+..||+..|.+.+++.++..+..
T Consensus 328 ~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~ 391 (396)
T TIGR00882 328 CFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLIS 391 (396)
T ss_pred HHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 67778888888888777766 6789999999999999999999999999999888877665543
No 163
>PRK15075 citrate-proton symporter; Provisional
Probab=99.38 E-value=2e-11 Score=120.86 Aligned_cols=145 Identities=19% Similarity=0.136 Sum_probs=104.9
Q ss_pred HhhhhhhhHHhhhhhhh-hcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHH-Hh-hhhhcc
Q 011529 116 CNMDRVNMSIAILPMSA-EFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATA-LT-PVAAKL 192 (483)
Q Consensus 116 ~~~~~~~~~~~~~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~-~~-~~~~~~ 192 (483)
..........+.|.+.+ .+|.+..+.++......++..++.++.|+++||+|||+++..+.++..+... .. ......
T Consensus 250 ~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (434)
T PRK15075 250 TTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAP 329 (434)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 33444445566777554 5899999999999999999999999999999999999988776554433221 11 111211
Q ss_pred cHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHH-hHHHHHHhhHHHhhhccCch
Q 011529 193 GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMY-LGSVTGLAFSPFLIHRFGWP 260 (483)
Q Consensus 193 ~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~-~g~~~g~~~~~~l~~~~g~~ 260 (483)
++..+.+..++.+++.+...+....++.|.+|+++|+.++++.+.... ++..++|.+.+++.++.|++
T Consensus 330 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 330 SFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred chHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCc
Confidence 444444445566677676667777889999999999999999655444 46788999999999988864
No 164
>PRK10504 putative transporter; Provisional
Probab=99.38 E-value=2e-11 Score=122.35 Aligned_cols=147 Identities=16% Similarity=0.128 Sum_probs=118.5
Q ss_pred HHHHhhhhhhhHHhhhhhhh-hcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhc
Q 011529 113 FLLCNMDRVNMSIAILPMSA-EFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAK 191 (483)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~ 191 (483)
.++............|.+.+ .+|.++.+.+++.....++..++.++.|++.||+|+|+++..+.++.++...++.+...
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~ 349 (471)
T PRK10504 270 SFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVAL 349 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccc
Confidence 33333444445556777555 58999999999999999999999999999999999999999888888777666554321
Q ss_pred -ccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCc
Q 011529 192 -LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGW 259 (483)
Q Consensus 192 -~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~ 259 (483)
.+.+.+.+..++.|++.+...+....++.+..|+++++.++++.+....+|..+|+.++|.+.+..++
T Consensus 350 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~g~ 418 (471)
T PRK10504 350 LGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLFGQ 418 (471)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 13444556677888888888888999999999999999999999999999999999999999886665
No 165
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.37 E-value=6.8e-12 Score=121.20 Aligned_cols=133 Identities=17% Similarity=0.236 Sum_probs=118.0
Q ss_pred Hhhhhhhhh-cCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhcccHHHHHHHHHH
Q 011529 125 IAILPMSAE-FNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVF 203 (483)
Q Consensus 125 ~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l 203 (483)
...|.+.++ +|.+..+.+++.+...++..++.++.+++.||++||+.+..+.++.+++.....+.+. +.+.+++..++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 310 (365)
T TIGR00900 232 ALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPP-NFPLFLVLWFA 310 (365)
T ss_pred HHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhch-hHHHHHHHHHH
Confidence 556776554 8999999999999999999999999999999999999998888777777777766662 37788888999
Q ss_pred HhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccC
Q 011529 204 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG 258 (483)
Q Consensus 204 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g 258 (483)
.|++.+...+...+++.|.+|+++|++..|+.+....+|..++|.++|.+.+++|
T Consensus 311 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 311 IGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999999999988654
No 166
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.37 E-value=1.4e-11 Score=122.04 Aligned_cols=164 Identities=12% Similarity=0.025 Sum_probs=112.0
Q ss_pred hhhHHhhhhhh-hhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHH---HHHHHhhhhhcccHHH
Q 011529 121 VNMSIAILPMS-AEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWS---IATALTPVAAKLGLPF 196 (483)
Q Consensus 121 ~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 196 (483)
......+|.+. +..|.++.+.++......++..++.++.|++.||+++++....+..+.. ++.+.+...+..+.+.
T Consensus 268 ~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (438)
T TIGR00712 268 YGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLV 347 (438)
T ss_pred HHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHH
Confidence 34445666654 4579999999999999999999999999999999965432222322221 1222212211113343
Q ss_pred HHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhH-HHHHHhhHHHhhhccCchHHHHHHHHHHHHHHH
Q 011529 197 LLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLG-SVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFT 275 (483)
Q Consensus 197 l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g-~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~ 275 (483)
..+..++.|++.............|.+|+++|+++.|+.+....+| ..++|.+.|.+.++.||...+++..++.++..+
T Consensus 348 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~ 427 (438)
T TIGR00712 348 DMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVI 427 (438)
T ss_pred HHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHH
Confidence 4444455555433322333356779999999999999999888876 578999999999999999999988887777776
Q ss_pred HHHHhccCC
Q 011529 276 VWLSKAHSS 284 (483)
Q Consensus 276 ~~~~~~~~~ 284 (483)
..+...+++
T Consensus 428 ~~~~~~~~~ 436 (438)
T TIGR00712 428 LLIVVMIGE 436 (438)
T ss_pred HHHHHHhhc
Confidence 666665553
No 167
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.35 E-value=1.6e-11 Score=114.11 Aligned_cols=176 Identities=17% Similarity=0.090 Sum_probs=141.1
Q ss_pred HHHHHHHHHHHhhhhhhhHHhhhh-hhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHH
Q 011529 106 VVLCFSAFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATA 184 (483)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 184 (483)
.+.+++.++........++..+|. +.++||.++.+.|.....+.+...+..+.+|+++||+|.+|++.+....++++..
T Consensus 220 ~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~ 299 (417)
T COG2223 220 TWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAA 299 (417)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHH
Confidence 344555566666666667777777 7888999999999999999999999999999999999999999988888888877
Q ss_pred Hhhhhhc-----ccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccC-
Q 011529 185 LTPVAAK-----LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG- 258 (483)
Q Consensus 185 ~~~~~~~-----~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g- 258 (483)
+..+... .+....++..+..+++.+........+++.++ +++-|.+.|+..+.+.+|+..-|..-+...+..|
T Consensus 300 ~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if-~~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~ 378 (417)
T COG2223 300 LLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIF-PKETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGS 378 (417)
T ss_pred HHHccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHH-HhhhhHHHHHHHHhccccccchhHHHHHHHHhccc
Confidence 7665531 14555555566666666666667788888888 5688999999999999999999999999988877
Q ss_pred chHHHHHHHHHHHHHHHHHHHhcc
Q 011529 259 WPSVFYSFGSLGTVWFTVWLSKAH 282 (483)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~ 282 (483)
+...|++...+.+++.++.+....
T Consensus 379 ~~~~f~~~~~~~~~a~v~~~~~y~ 402 (417)
T COG2223 379 YTGAFMLLLAFYLVALVLTWALYA 402 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 889999988888888776555443
No 168
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.35 E-value=3.6e-11 Score=120.84 Aligned_cols=165 Identities=13% Similarity=0.037 Sum_probs=123.4
Q ss_pred hhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhccc-H-HHH
Q 011529 120 RVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLG-L-PFL 197 (483)
Q Consensus 120 ~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~-~-~~l 197 (483)
........|.+.++.|.+....++......+...++.++.|+++||+|||++++.+.++.+++.+++......+ . ...
T Consensus 287 ~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~ 366 (479)
T PRK10077 287 INVVLYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVA 366 (479)
T ss_pred hhHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHH
Confidence 33444556888888998887777777788888999999999999999999999999998888877765432111 1 122
Q ss_pred HHHHHHHhhhhhc-chhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHh------hhccCchHHHHHHHHHH
Q 011529 198 LVVRVFMGIGEGV-AMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFL------IHRFGWPSVFYSFGSLG 270 (483)
Q Consensus 198 ~~~~~l~G~~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l------~~~~g~~~~~~~~~~~~ 270 (483)
..+.++.+++.+. ..+....++.|.+|+++|++++|+.+....+|.++++.+.+.+ .+..+|+..|++.++++
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (479)
T PRK10077 367 LLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMG 446 (479)
T ss_pred HHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHH
Confidence 3334444444433 3367789999999999999999999999999999886665544 35678888999888877
Q ss_pred HHHHHHHHHhccCC
Q 011529 271 TVWFTVWLSKAHSS 284 (483)
Q Consensus 271 ~~~~~~~~~~~~~~ 284 (483)
++..++.+...+|+
T Consensus 447 ~~~~~~~~~~~~e~ 460 (479)
T PRK10077 447 VLAALFMWKFVPET 460 (479)
T ss_pred HHHHHHHHhccccC
Confidence 77766666655554
No 169
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.35 E-value=2.6e-11 Score=120.29 Aligned_cols=176 Identities=16% Similarity=0.145 Sum_probs=154.8
Q ss_pred HHHHHHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcC--CchHHHHHHHHHHH
Q 011529 104 FIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVG--GKAVLGFGVVWWSI 181 (483)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g--~r~~~~~~~~~~~~ 181 (483)
..++.+.+...+..+........+|.+.++.+.+..+.+.+.++..+...++.++.|+++|+.. ++.+..++.++.++
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl 377 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGL 377 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHH
Confidence 3556666677777777777888899999999999999999999999999999999999999988 44556677778888
Q ss_pred HHHHhhhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccC-ch
Q 011529 182 ATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG-WP 260 (483)
Q Consensus 182 ~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-~~ 260 (483)
+.+.+++.+ +++.++...++.|++.|.........+.|+.+.++-..+.|+...+..++.++||+++|.+.+..+ |.
T Consensus 378 ~~~~~p~~~--~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~ 455 (509)
T KOG2504|consen 378 ARLFLPFAT--TYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYD 455 (509)
T ss_pred HHHHHHHhc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCee
Confidence 888888888 999999999999999998888888899999999999999999999999999999999999999877 99
Q ss_pred HHHHHHHHHHHHHHHHHHHhc
Q 011529 261 SVFYSFGSLGTVWFTVWLSKA 281 (483)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~ 281 (483)
..|+..++..++....++...
T Consensus 456 ~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 456 HAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred eehhhcChHHHHHHHHHHHhH
Confidence 999999988888776665554
No 170
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.34 E-value=1.5e-11 Score=119.49 Aligned_cols=153 Identities=13% Similarity=0.093 Sum_probs=108.9
Q ss_pred HHHHHHhhhhhhhHHhhhh-hhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCC-chHHH-HHH-HHHHHHHHHh
Q 011529 111 SAFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGG-KAVLG-FGV-VWWSIATALT 186 (483)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~-r~~~~-~~~-~~~~~~~~~~ 186 (483)
+..++............|. +.+++|.++.+.+++.+...++..++.++.|++.||..+ |+... ... ....++....
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~ 302 (379)
T TIGR00881 223 LGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVY 302 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHH
Confidence 3333334444444555565 456789999999999999999999999999999998643 33222 211 1222222222
Q ss_pred hhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHH
Q 011529 187 PVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVF 263 (483)
Q Consensus 187 ~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~ 263 (483)
...+..+.+..++..++.|+......+....++.|.+|+++|+++.|+.+....+|..++|.+.|.+.++.||++.|
T Consensus 303 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 303 WLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFGWAGAF 379 (379)
T ss_pred hcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhcccccC
Confidence 22111145556666777777666666667788999999999999999999999999999999999999999998753
No 171
>PRK10054 putative transporter; Provisional
Probab=99.34 E-value=3.7e-11 Score=117.26 Aligned_cols=151 Identities=11% Similarity=0.083 Sum_probs=123.1
Q ss_pred hhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhcccHHHHHHHHHHHhhhhhcc
Q 011529 132 AEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVA 211 (483)
Q Consensus 132 ~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~ 211 (483)
++.+.+....+++.....+.....+++.|++.||+++|+.+..+.++..++.+...+..+ +.+.+++..++.|+|.+..
T Consensus 237 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~ 315 (395)
T PRK10054 237 ADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGN-SLLLWGMSAAVFTVGEIIY 315 (395)
T ss_pred cccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcch-HHHHHHHHHHHHHHHHHHH
Confidence 456777888888988888888888899999999999999999998888888776665421 6677777888999998888
Q ss_pred hhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHHHHHHhccCC
Q 011529 212 MPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSS 284 (483)
Q Consensus 212 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (483)
.|...+.+.+..|++.|++.++..+ ...+|..+||.++|.+.++.|....|++.++...+..++.++..+++
T Consensus 316 ~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (395)
T PRK10054 316 APGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAWLLMLKGMRAR 387 (395)
T ss_pred HhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHHHhccccC
Confidence 8888899999999999999998765 56689999999999999999988888887776666655555433333
No 172
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.34 E-value=5.2e-11 Score=116.28 Aligned_cols=151 Identities=17% Similarity=0.132 Sum_probs=114.7
Q ss_pred hhhhhhhhcCCChhhHHHHHHHHHH-HHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhh----cccHHHHHHH
Q 011529 126 AILPMSAEFNWNPATVGLIQSSFFW-GYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAA----KLGLPFLLVV 200 (483)
Q Consensus 126 ~~~~~~~~~g~s~~~~g~~~~~~~~-~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~ 200 (483)
..+.+.+|.|+++.++|++.....+ ...++.++.|++.||+|+|+.+..+.++.++..+...... ..+.+.+...
T Consensus 230 ~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (390)
T TIGR02718 230 LSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSC 309 (390)
T ss_pred HhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHH
Confidence 4556666789999999999888764 6667789999999999999998877766533332221111 0133344455
Q ss_pred HHHHhhhhhcchhHHHHHHhhhcCC-cchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHHH
Q 011529 201 RVFMGIGEGVAMPAMNNILSKWVPV-AERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTV 276 (483)
Q Consensus 201 ~~l~G~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~ 276 (483)
..+.+++.+...+...+...+..++ +++++.+++.+...++|..+||.++|.+.+..|++..|.+.+++.++..+.
T Consensus 310 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 310 SAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAILL 386 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHH
Confidence 5566677777778888887777766 889999999999999999999999999999999999998887766665443
No 173
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.34 E-value=1.2e-10 Score=109.38 Aligned_cols=159 Identities=9% Similarity=0.084 Sum_probs=121.1
Q ss_pred HHHHHHHHHHHhhhhhhhHHhhhhhhh---hcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHH
Q 011529 106 VVLCFSAFLLCNMDRVNMSIAILPMSA---EFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIA 182 (483)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 182 (483)
+.+..+..++..........+.+.+.+ .+|.++.+.++..+.+..+..++.++.+++.||+|+|+.+.++.++..++
T Consensus 142 ~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~ 221 (310)
T TIGR01272 142 LVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLL 221 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 333444444444345555555666543 36999999999999999999999999999999999999988888877777
Q ss_pred HHHhhhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHH
Q 011529 183 TALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSV 262 (483)
Q Consensus 183 ~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~ 262 (483)
.++....+ +.. .....++.|++.+..+|...+...+..|+ +.+++.++. .+..+|..++|.+.|.+.+..|.+..
T Consensus 222 ~~l~~~~~--~~~-~~~~~~l~g~~~s~i~P~~~s~a~~~~~~-~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a 296 (310)
T TIGR01272 222 SIGAALTH--GYV-AMWFVLALGLFNSIMFPTIFSLALNALGR-HTSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLA 296 (310)
T ss_pred HHHHHHcC--CHH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhh-hhhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHH
Confidence 66555544 333 23456688999999999999999988854 456677775 67779999999999999999998888
Q ss_pred HHHHHHH
Q 011529 263 FYSFGSL 269 (483)
Q Consensus 263 ~~~~~~~ 269 (483)
|++..+.
T Consensus 297 ~~v~~~~ 303 (310)
T TIGR01272 297 FALPVPC 303 (310)
T ss_pred HHHHHHH
Confidence 8754433
No 174
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.33 E-value=1.9e-10 Score=112.30 Aligned_cols=146 Identities=11% Similarity=0.029 Sum_probs=116.5
Q ss_pred hhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHH-HHHHHHHhhhhhcccHHHHHHHHHHHh
Q 011529 127 ILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVW-WSIATALTPVAAKLGLPFLLVVRVFMG 205 (483)
Q Consensus 127 ~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~l~G 205 (483)
.|.+.+++|.+..+.+.+.....++..++.++.+++.||.++ +.++.+.++ .....++....+ +.+.+.+..++.|
T Consensus 240 ~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~-~~l~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~l~G 316 (394)
T PRK10213 240 RPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVK-LALAGAPLVLAVSALVLTLWGS--DKIVATGVAIIWG 316 (394)
T ss_pred HHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccch-hHHHHHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHH
Confidence 466778889999999999999999999999999999999654 444444344 333344444445 6777888889999
Q ss_pred hhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHHH
Q 011529 206 IGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTV 276 (483)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~ 276 (483)
++.+...+...+++.+..| +++++..+......++|..+||.++|.+.+..|++..+...+++.++..+.
T Consensus 317 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~ 386 (394)
T PRK10213 317 LTFALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLTALL 386 (394)
T ss_pred HHHHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHHHHHH
Confidence 9999889989989998885 667788888888999999999999999999999998888877666554443
No 175
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.33 E-value=3.8e-11 Score=114.09 Aligned_cols=162 Identities=10% Similarity=0.069 Sum_probs=137.4
Q ss_pred hHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhcccHHHHHHHHH
Q 011529 123 MSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRV 202 (483)
Q Consensus 123 ~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 202 (483)
+..+...+-++-+.+....|.+.++..+.-++...+..++.+|+|.|+.++++..++.+=.+++++++ +.+.+.+.+.
T Consensus 243 f~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~--~~~~i~~~kl 320 (412)
T PF01306_consen 243 FPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFAT--NPWVISLIKL 320 (412)
T ss_dssp HHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT----SHHHHHHHHH
T ss_pred HHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhc--chHHHHHHHH
Confidence 44444444455556677899999999999999999999999999999999999999999999999999 9999999999
Q ss_pred HHhhhhhcchhHHHHHHhhhcCCcchhHHHHH-HHHHHHhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHHHHHHhc
Q 011529 203 FMGIGEGVAMPAMNNILSKWVPVAERSRSLAL-VYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKA 281 (483)
Q Consensus 203 l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 281 (483)
+.|+-.+....+...++.+.+|+|..++...+ .+...++|..+.+.++|.+.|+.|.+.+|++++.+.++..++..+..
T Consensus 321 LH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l 400 (412)
T PF01306_consen 321 LHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTL 400 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeee
Confidence 99999999999999999999998888888888 47889999999999999999999999999999988887777776666
Q ss_pred cCCCC
Q 011529 282 HSSPA 286 (483)
Q Consensus 282 ~~~~~ 286 (483)
+++++
T Consensus 401 ~~~~~ 405 (412)
T PF01306_consen 401 KKDKK 405 (412)
T ss_dssp --SSS
T ss_pred cCCCc
Confidence 55433
No 176
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.33 E-value=1.1e-10 Score=115.55 Aligned_cols=159 Identities=11% Similarity=0.029 Sum_probs=103.0
Q ss_pred hhhhHHhhhh-hhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhh--hhhcccHHH
Q 011529 120 RVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTP--VAAKLGLPF 196 (483)
Q Consensus 120 ~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 196 (483)
...+..++|. +.+++|.+..+.+...++..+...+++++.|+++||+|||+++.++.++.++...... .....+.+.
T Consensus 259 ~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (432)
T PRK10406 259 FYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYA 338 (432)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHH
Confidence 3344556676 4566899999999999988888899999999999999999988776655433332211 111112232
Q ss_pred HHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHh-HHHHHHhhHHHhhhccC-chHHHHHHHHHHHHHH
Q 011529 197 LLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYL-GSVTGLAFSPFLIHRFG-WPSVFYSFGSLGTVWF 274 (483)
Q Consensus 197 l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~~~l~~~~g-~~~~~~~~~~~~~~~~ 274 (483)
.+....+.+++.+...+....++.|++|++.|++++|+.+...++ .....|.+.+.+ +..| |...+++.++..++..
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l-~~~g~~~~~~~~~~~~~~i~~ 417 (432)
T PRK10406 339 AFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSL-KSIGMETAFFWYVTLMAVVAF 417 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHH-HHhCCCcHHHHHHHHHHHHHH
Confidence 222222233333344455678899999999999999998876654 344577777755 4445 5555565555555554
Q ss_pred HHHHH
Q 011529 275 TVWLS 279 (483)
Q Consensus 275 ~~~~~ 279 (483)
+..++
T Consensus 418 ~~~~~ 422 (432)
T PRK10406 418 LVSLM 422 (432)
T ss_pred HHHHH
Confidence 44443
No 177
>TIGR00898 2A0119 cation transport protein.
Probab=99.33 E-value=3.2e-11 Score=122.03 Aligned_cols=148 Identities=12% Similarity=-0.039 Sum_probs=112.8
Q ss_pred hhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhcccHHHHHHHHHHHhhh
Q 011529 128 LPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIG 207 (483)
Q Consensus 128 ~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~ 207 (483)
+...+.++.+... ...+..+...++.++.+++.||+|||+.+.++.++.+++.++..+.+..+.+..++..++.+++
T Consensus 347 ~~~~~~~~~~~~~---~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 423 (505)
T TIGR00898 347 VLDLGNLGGNIYL---DLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFG 423 (505)
T ss_pred hccccccCCChHH---HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHH
Confidence 3344555555433 3334566777888999999999999999999999888888777766522234555566677777
Q ss_pred hhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHHHHHHh
Q 011529 208 EGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSK 280 (483)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 280 (483)
.+..++....+..|.+|++.|++++|+.+....+|.+++|.+.+ + ...++...+.+.++..++..++.++.
T Consensus 424 ~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~l 494 (505)
T TIGR00898 424 ITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-L-GEKWLFLPLVLFGGLALLAGILTLFL 494 (505)
T ss_pred HHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-H-HHHHHhhHHHHHHHHHHHHHHHHHcC
Confidence 77778888999999999999999999999999999999999988 4 34566777777777777766655543
No 178
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.32 E-value=1.6e-11 Score=123.94 Aligned_cols=162 Identities=10% Similarity=0.004 Sum_probs=107.7
Q ss_pred hhHHhhhhhhhhcCCChhhHHH------------HHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhh
Q 011529 122 NMSIAILPMSAEFNWNPATVGL------------IQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVA 189 (483)
Q Consensus 122 ~~~~~~~~~~~~~g~s~~~~g~------------~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 189 (483)
......|.+.++.|.+..+.+. ...+..++..++.++.++++||+|||++++++.++.+++.++..+.
T Consensus 306 ~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~ 385 (502)
T TIGR00887 306 GVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFA 385 (502)
T ss_pred ccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHH
Confidence 3444577777788876542211 2234445666788899999999999999988887777766555443
Q ss_pred hc--ccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhc----------c
Q 011529 190 AK--LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR----------F 257 (483)
Q Consensus 190 ~~--~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~----------~ 257 (483)
.. .+...+....+...++.....+....+..|.+|++.|+++.|+.+....+|.+++|.+.+.+.+. .
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 465 (502)
T TIGR00887 386 YNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGI 465 (502)
T ss_pred HHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccc
Confidence 21 01111111111222222234456677889999999999999999999999999999999998873 3
Q ss_pred CchHHHHHHHHHHHHHHHHHHHhccCC
Q 011529 258 GWPSVFYSFGSLGTVWFTVWLSKAHSS 284 (483)
Q Consensus 258 g~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (483)
++...|++.+++.++..+.. ++.||+
T Consensus 466 ~~~~~~~i~~~~~~~~~i~~-~~lpEt 491 (502)
T TIGR00887 466 WMGHVLEIFALFMFLGILFT-LLIPET 491 (502)
T ss_pred cchHHHHHHHHHHHHHHHHh-eEeccC
Confidence 44567777777776665544 344554
No 179
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.31 E-value=5.8e-12 Score=114.06 Aligned_cols=133 Identities=12% Similarity=0.108 Sum_probs=102.2
Q ss_pred HHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhcccH--HHHHHHHHHHhhhhhcchhHHHHHHhhhcC
Q 011529 147 SFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGL--PFLLVVRVFMGIGEGVAMPAMNNILSKWVP 224 (483)
Q Consensus 147 ~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~ 224 (483)
+..+....+.++.+++.||+|||+.|..+.++++++.++...+...|. .++..+|++ ..+.+.+.+.|..|.+|
T Consensus 389 itslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~araf----isg~fqvaYvYtPEVyP 464 (528)
T KOG0253|consen 389 ITSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAF----ISGAFQVAYVYTPEVYP 464 (528)
T ss_pred HHHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHH----HhchheEEEEecCcccc
Confidence 345566778899999999999999999999999999888877663232 223344544 44556677889999999
Q ss_pred CcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHHHHHHhccCCC
Q 011529 225 VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSP 285 (483)
Q Consensus 225 ~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (483)
...|+.+.|....+..+|+++.|+++ +.....-..+..+.+.+++++.+...+++-+++
T Consensus 465 TavRatgvGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcffPiEtk 523 (528)
T KOG0253|consen 465 TAVRATGVGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIAVCFFPIETK 523 (528)
T ss_pred hhhhhcchhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHHheeeeeccC
Confidence 99999999999999999999999998 333334455666677777777777777666543
No 180
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.31 E-value=4.6e-11 Score=118.61 Aligned_cols=145 Identities=14% Similarity=0.149 Sum_probs=113.2
Q ss_pred HHHHhhhhhhhHHhhhhhhhh-cCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhc
Q 011529 113 FLLCNMDRVNMSIAILPMSAE-FNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAK 191 (483)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~ 191 (483)
.++............+.+.++ ++ +..+.+++.++..++..++.+++++++||+|+|+++..+.++.+++.+...+.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~- 308 (437)
T TIGR00792 231 YLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAG- 308 (437)
T ss_pred HHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcc-
Confidence 333333333333334444333 34 566778888888999999999999999999999999999888888777665543
Q ss_pred ccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcC-------CcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCc
Q 011529 192 LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVP-------VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGW 259 (483)
Q Consensus 192 ~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~-------~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~ 259 (483)
.+.+.+++..++.|++.+...+...++++|..+ ++++|..+|+.+....+|..+++.+.|.+.+..||
T Consensus 309 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~ 383 (437)
T TIGR00792 309 SNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGY 383 (437)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 156677778888999999888999999988865 45679999999999999999999999999987776
No 181
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.31 E-value=1.5e-10 Score=113.77 Aligned_cols=157 Identities=11% Similarity=0.013 Sum_probs=119.3
Q ss_pred Hhhhh-hhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhh---cccHHHHHHH
Q 011529 125 IAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAA---KLGLPFLLVV 200 (483)
Q Consensus 125 ~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~ 200 (483)
...|. +.+++|.++.+.++......++..++.++.|++.||+++|+.+.++.++..++.++..+.+ ..+.+.+++.
T Consensus 236 ~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 315 (406)
T PRK15402 236 ALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAG 315 (406)
T ss_pred HHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHH
Confidence 33455 4567899999999988888888999999999999999999999888887777766655432 1256667788
Q ss_pred HHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHHHHHHh
Q 011529 201 RVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSK 280 (483)
Q Consensus 201 ~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 280 (483)
.++.|++.+...+......... ++++|++..+..+....+|..+|+.+++.+.+..++....+..++..++..+.....
T Consensus 316 ~~~~g~g~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (406)
T PRK15402 316 LSLYAFGIGLANAGLYRLTLFS-SDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANGLLWLLLVRIF 394 (406)
T ss_pred HHHHHHHHHHHhhhHHHHHhhh-ccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 8889999887777666655444 458999999999999999999999999999888787665555444444443433333
Q ss_pred cc
Q 011529 281 AH 282 (483)
Q Consensus 281 ~~ 282 (483)
.+
T Consensus 395 ~~ 396 (406)
T PRK15402 395 LK 396 (406)
T ss_pred hc
Confidence 33
No 182
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.30 E-value=1.9e-10 Score=111.25 Aligned_cols=172 Identities=17% Similarity=0.215 Sum_probs=134.2
Q ss_pred HHHHHHhhhhhhhHHhhhhhhhhcC-CChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhh
Q 011529 111 SAFLLCNMDRVNMSIAILPMSAEFN-WNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVA 189 (483)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~g-~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 189 (483)
+..++.......+..+.+.+.++.| .+....+.+.++..+.-++.-...+++..|+|.|+++.++.+..++=..+.+..
T Consensus 214 l~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~ 293 (400)
T PF03825_consen 214 LAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYF 293 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHh
Confidence 3444555556666666777778887 678888988899999999999999999999999999999999999888888777
Q ss_pred hcccHHHHHH----HHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHH-HHhHHHHHHhhHHHhhhccCchH---
Q 011529 190 AKLGLPFLLV----VRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSG-MYLGSVTGLAFSPFLIHRFGWPS--- 261 (483)
Q Consensus 190 ~~~~~~~l~~----~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-~~~g~~~g~~~~~~l~~~~g~~~--- 261 (483)
.+ +.+...+ ...+.|+..+..+.+...++.+..|++.|+++.++++.. .++|..+|..++|++.+++|-+.
T Consensus 294 ~~-~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~ 372 (400)
T PF03825_consen 294 SD-PWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFD 372 (400)
T ss_pred cC-CcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhh
Confidence 21 4433333 345799999999999999999999999999999998765 68999999999999999877543
Q ss_pred ---HHHHHHHHHHHHHHHHHHhccC
Q 011529 262 ---VFYSFGSLGTVWFTVWLSKAHS 283 (483)
Q Consensus 262 ---~~~~~~~~~~~~~~~~~~~~~~ 283 (483)
.+.+.+++.++..+++....++
T Consensus 373 ~~~~~~v~a~~~~~~~~~f~~~fk~ 397 (400)
T PF03825_consen 373 WSAVFLVFAVMALVILVLFVILFKP 397 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccC
Confidence 4445555555555554444443
No 183
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.29 E-value=2.3e-10 Score=111.32 Aligned_cols=151 Identities=11% Similarity=-0.012 Sum_probs=111.2
Q ss_pred hhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhh-hhcccHHHHHHHHHHHh
Q 011529 127 ILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPV-AAKLGLPFLLVVRVFMG 205 (483)
Q Consensus 127 ~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~l~G 205 (483)
.|.+.+.+|.++.+.+++.+...++..++.++.|++.||+|+|+.+..+..+.+++.++... .+ +.+..++..++.+
T Consensus 223 ~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~~~ 300 (382)
T PRK10091 223 KPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGG--MKTASLIFAFICC 300 (382)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHH
Confidence 44566678999999999999999999999999999999999999998888887777655543 33 4455556666666
Q ss_pred hhhhcchhHHHH-HHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhc-cCchHHHHHHHHHHHHHHHHHHHhc
Q 011529 206 IGEGVAMPAMNN-ILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR-FGWPSVFYSFGSLGTVWFTVWLSKA 281 (483)
Q Consensus 206 ~~~~~~~~~~~~-~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~ 281 (483)
++.....+.... ...+..+++.++.. ..+....+|..+||.++|++.+. .+|++.+.+.+++.++.........
T Consensus 301 ~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (382)
T PRK10091 301 AGLFALSAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLYG 376 (382)
T ss_pred HHHHhhhHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHHHHh
Confidence 665544444443 34444444444443 34677899999999999999985 6899999988777766555444443
No 184
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.29 E-value=1.4e-10 Score=113.77 Aligned_cols=149 Identities=14% Similarity=0.165 Sum_probs=106.8
Q ss_pred hhhhhhhcCCChhhHHHHHHHH-HHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHh---hhhhcccHHHHHHHHH
Q 011529 127 ILPMSAEFNWNPATVGLIQSSF-FWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALT---PVAAKLGLPFLLVVRV 202 (483)
Q Consensus 127 ~~~~~~~~g~s~~~~g~~~~~~-~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~ 202 (483)
.+.+.+++|+++.+++++.... .++..++.+++|++.||+|+|+.+..+.++..+..+.. .+.+ .+.+.+++..+
T Consensus 233 ~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~-~~~~~~~~~~~ 311 (402)
T PRK11902 233 TTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTP-KHLWTMALAIG 311 (402)
T ss_pred HHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcC-CcHHHHHHHHH
Confidence 3456777999999999998665 45688999999999999999998877776665554333 2332 14555555544
Q ss_pred ----HHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHHHHH
Q 011529 203 ----FMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWL 278 (483)
Q Consensus 203 ----l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 278 (483)
..|++.+...+....++.+.+|.+ ..++.+...++|..+++.++|.+.+++||+..|.+.++++++..++..
T Consensus 312 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~ 387 (402)
T PRK11902 312 IENLCGGMGTAAFVALLMALCNRSFSAT----QYALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLW 387 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH
Confidence 445555555666666777666544 446666666778877777899999999999999998888877665554
Q ss_pred Hh
Q 011529 279 SK 280 (483)
Q Consensus 279 ~~ 280 (483)
..
T Consensus 388 ~~ 389 (402)
T PRK11902 388 LM 389 (402)
T ss_pred HH
Confidence 43
No 185
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.28 E-value=1.6e-10 Score=113.56 Aligned_cols=161 Identities=13% Similarity=0.104 Sum_probs=111.4
Q ss_pred HHHHHHHHHhhhhhhhHHhhhhhhhhc--CCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchH-HHHHHHHHHHHHH
Q 011529 108 LCFSAFLLCNMDRVNMSIAILPMSAEF--NWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAV-LGFGVVWWSIATA 184 (483)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~-~~~~~~~~~~~~~ 184 (483)
...+.+++.......+..++|.+.+++ +.+..+.+.+.+...++..++.+++|+++||+++|+. +....++..++.+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~ 325 (412)
T TIGR02332 246 LYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWL 325 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHH
Confidence 334444445555555667788877764 6688889999999999999999999999999997775 3444444444333
Q ss_pred HhhhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccC-chHHH
Q 011529 185 LTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG-WPSVF 263 (483)
Q Consensus 185 ~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-~~~~~ 263 (483)
+..... +....+++..+.+++.....+.......|.+|+++|++++|+.+....+|.+++|.+.+.+.+..| |++.+
T Consensus 326 ~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~ 403 (412)
T TIGR02332 326 LASATD--HNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATGSFNSGL 403 (412)
T ss_pred HHHhcC--CHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhH
Confidence 222222 222222222233333333334444555678899999999999999999999999999999999875 99988
Q ss_pred HHHHHHH
Q 011529 264 YSFGSLG 270 (483)
Q Consensus 264 ~~~~~~~ 270 (483)
++.+++.
T Consensus 404 ~~~~~~~ 410 (412)
T TIGR02332 404 WFVAALL 410 (412)
T ss_pred HHHHHHH
Confidence 8766543
No 186
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=99.27 E-value=2.4e-09 Score=103.12 Aligned_cols=282 Identities=13% Similarity=0.045 Sum_probs=173.0
Q ss_pred HHHHHHHHHHHhhhhhhhHHhhhhhhhhc-CCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHH----
Q 011529 106 VVLCFSAFLLCNMDRVNMSIAILPMSAEF-NWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWS---- 180 (483)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~---- 180 (483)
...+...+++...+.-++....+.+..+. .-+---.+...-.-.+..+++++..|.+.||..|.+++..+.+..-
T Consensus 4 ~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~ 83 (432)
T PF06963_consen 4 LWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVA 83 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHH
Confidence 44567788888888888888888855554 4455556666667777888999999999999999888766644422
Q ss_pred HHHHHhh--hhhcc-----c--HHHHHHHHHHHhhhhhcchhH-HHHHHhhh----c--CCcchhHHHHHHHHHHHhHHH
Q 011529 181 IATALTP--VAAKL-----G--LPFLLVVRVFMGIGEGVAMPA-MNNILSKW----V--PVAERSRSLALVYSGMYLGSV 244 (483)
Q Consensus 181 ~~~~~~~--~~~~~-----~--~~~l~~~~~l~G~~~~~~~~~-~~~~~~~~----~--~~~~r~~~~~~~~~~~~~g~~ 244 (483)
+++.++. +.... + .+.+++...+.|.-.-....+ ..+.=.|| . +++.+.+.++...-.-.+.-+
T Consensus 84 ~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckl 163 (432)
T PF06963_consen 84 ASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKL 163 (432)
T ss_pred HHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHH
Confidence 2222221 11100 1 112222222222221111111 11111223 2 345667888888888889999
Q ss_pred HHHhhHHHhhhccCchHHHHHHHHHHHHHHHHHHHhc----cCCCCCCCCCChhh---H--HH----------hhhcccC
Q 011529 245 TGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKA----HSSPAEDPQLRPAE---K--KL----------IVSSCAS 305 (483)
Q Consensus 245 ~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~---~--~~----------~~~~~~~ 305 (483)
++|++.|.+.+..+.+....+.++..++..++=+++. +..|.-+.+.++.+ . .. .......
T Consensus 164 laPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (432)
T PF06963_consen 164 LAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFLLARVYNSVPALAVKKRSSESESSSDEESSSESSSDPSILKRLWN 243 (432)
T ss_pred HHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHhcCCCCCccccccccccccccccchhhHHHHHHH
Confidence 9999999999988988888877777776655433221 11111110000000 0 00 0000000
Q ss_pred CCCCcccchhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHh
Q 011529 306 KEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLV 385 (483)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g 385 (483)
.-.....+|+..+++|.+.......+++. ..-++...+..|+.. .|+++...|.+-+...+.++.|.++.+++.+|+|
T Consensus 244 ~~~~~~~~w~~Y~~q~vflas~alalLY~-TVLsf~~lmt~yl~~-~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riG 321 (432)
T PF06963_consen 244 PLRTIIRGWRTYFRQPVFLASFALALLYF-TVLSFGGLMTAYLKS-QGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIG 321 (432)
T ss_pred HHHHHhccHHHHHhCHHHHHHHHHHHHHH-HHhcCcHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 00111345777777777665555444444 455567888889988 5999999999999999999999999999999999
Q ss_pred hcCC
Q 011529 386 SKGL 389 (483)
Q Consensus 386 ~~~~ 389 (483)
..|.
T Consensus 322 lvr~ 325 (432)
T PF06963_consen 322 LVRA 325 (432)
T ss_pred chhh
Confidence 6653
No 187
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.26 E-value=5.7e-11 Score=118.81 Aligned_cols=154 Identities=17% Similarity=0.029 Sum_probs=107.9
Q ss_pred HHhhhh-hhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCc-------hHHHHHHHHHHHHHHHhhhhhcccHH
Q 011529 124 SIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGK-------AVLGFGVVWWSIATALTPVAAKLGLP 195 (483)
Q Consensus 124 ~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r-------~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (483)
...+|. +.+++|.+..+.+.+.++..++..++.+++|+++||++|| ....+..++.++..++....+ +.+
T Consensus 272 ~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~--~~~ 349 (476)
T PLN00028 272 DNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRAN--SLG 349 (476)
T ss_pred HhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccc--hHH
Confidence 334555 4567899999999999999999999999999999999865 223333333333334444444 555
Q ss_pred HHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHH
Q 011529 196 FLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFT 275 (483)
Q Consensus 196 ~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~ 275 (483)
..++..++.+++.+...+...+++.+.. +++++...|+.+.+..+|..++|.+.+ ..+..+|+..|++.+++.++..+
T Consensus 350 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~ 427 (476)
T PLN00028 350 AAIVVMILFSIFVQAACGATFGIVPFVS-RRSLGVISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTL 427 (476)
T ss_pred HHHHHHHHHHHHHHHhhhhhcccCcccC-hhhchhhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHH
Confidence 5555666667666555556666666665 578999999998888788877776654 22234699999998888877766
Q ss_pred HHHHhc
Q 011529 276 VWLSKA 281 (483)
Q Consensus 276 ~~~~~~ 281 (483)
+.++.+
T Consensus 428 ~~~~~~ 433 (476)
T PLN00028 428 PVAFIH 433 (476)
T ss_pred HHHhee
Confidence 665554
No 188
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.26 E-value=2.7e-09 Score=95.01 Aligned_cols=178 Identities=15% Similarity=0.088 Sum_probs=130.6
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHH
Q 011529 102 RWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSI 181 (483)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 181 (483)
||..+......... ....+.++.+-|.+++.+|+|..|...+.....++..+ .++.|.+.|++|++.++.+|.+...+
T Consensus 1 rW~~l~a~~~v~~~-~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~ 78 (250)
T PF06813_consen 1 RWLSLVASIWVQLC-SGTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFV 78 (250)
T ss_pred ChhhHHHHHHHHHh-cCcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 34444443333333 33566678888999999999999999999999999986 69999999999999999999999999
Q ss_pred HHHHhhhhhc-----ccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhc
Q 011529 182 ATALTPVAAK-----LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR 256 (483)
Q Consensus 182 ~~~~~~~~~~-----~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 256 (483)
+..+..++.. .++|.+.+..++.|.+.+....+......+.|| ++||++.|+.-...++++.+-..+...+.+.
T Consensus 79 GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~ 157 (250)
T PF06813_consen 79 GYGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGD 157 (250)
T ss_pred HHHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCC
Confidence 9887765421 256788888888888877777787777778995 6899999999999999988877776666554
Q ss_pred cCchHHHHHHHHHHHHHHHHHHHhccC
Q 011529 257 FGWPSVFYSFGSLGTVWFTVWLSKAHS 283 (483)
Q Consensus 257 ~g~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (483)
+-...+.+.+....+..+....+.+.
T Consensus 158 -~~~~fll~la~~~~~v~l~~~~~vr~ 183 (250)
T PF06813_consen 158 -DPSSFLLFLAVLPAVVCLVAMFFVRP 183 (250)
T ss_pred -ChHHHHHHHHHHHHHHHHHHhhheec
Confidence 32333333444333333333333333
No 189
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.25 E-value=1.3e-10 Score=113.93 Aligned_cols=261 Identities=14% Similarity=0.095 Sum_probs=168.2
Q ss_pred HHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhc-----CCchHHHHHHHHHHHHHHHhhhhhc--ccHHH
Q 011529 124 SIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTV-----GGKAVLGFGVVWWSIATALTPVAAK--LGLPF 196 (483)
Q Consensus 124 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-----g~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 196 (483)
....+.+.+++|+++++...+.++..+...+ .++.|.++|-+ .||+-++++.++..++.+.++..+. .+...
T Consensus 10 ~~~~~~l~~~l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~ 88 (433)
T PF03092_consen 10 LAIYPFLKDDLGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAI 88 (433)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhh
Confidence 3446778999999999999999999888874 89999999976 3555567777777666655555442 14566
Q ss_pred HHHHHHHHhhhhhcchhHHHHHHhhhcC--CcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHH
Q 011529 197 LLVVRVFMGIGEGVAMPAMNNILSKWVP--VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWF 274 (483)
Q Consensus 197 l~~~~~l~G~~~~~~~~~~~~~~~~~~~--~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~ 274 (483)
..+..++..+|.........+.+.|... +++++...+.......+|.+++..++|.+.+..+++..|.+.+++..+..
T Consensus 89 ~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~ 168 (433)
T PF03092_consen 89 AVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLML 168 (433)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHH
Confidence 6677788889999999999999999874 34478888999999999999999999999999999999998888877776
Q ss_pred HHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChhHHHHHH-HHHHHHHHHHHHHHhhHHHHHHHhC
Q 011529 275 TVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIV-SHFCHNWGTFILLTWMPTYYNQVLH 353 (483)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g 353 (483)
+..+...+|++...........++.........++....+++.++++.+|...+ ..++............-.+..+..+
T Consensus 169 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~fy~~~~~~~ 248 (433)
T PF03092_consen 169 IVALFLLEERKVRPADEVFSFGKEEVPCLFGSFREQLSELWRALQQRAIWQPILFFIFFFNLPPSISSASSFYFQTDALG 248 (433)
T ss_pred HHHHHhhhhccccccchhhcccccccchhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccEEEEEecccc
Confidence 666665554221111100000000000000000011223456677788877666 3332222221111101112223345
Q ss_pred ---CCcchhhHHhHHHHHHHHHHHHHHHHHHHHHh
Q 011529 354 ---FNLTESGLFCVLPWLTMAFSANLGGWIADTLV 385 (483)
Q Consensus 354 ---~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g 385 (483)
+++...+.+..+..++.++|..+..+...+..
T Consensus 249 gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~ 283 (433)
T PF03092_consen 249 GPHFSPSFYGTLSIVGSIASLLGILLYRKYFSNWS 283 (433)
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 78877787776666677777666655544443
No 190
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.24 E-value=2.3e-10 Score=106.52 Aligned_cols=155 Identities=19% Similarity=0.157 Sum_probs=129.7
Q ss_pred hhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhcccHHHHHHH
Q 011529 121 VNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVV 200 (483)
Q Consensus 121 ~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 200 (483)
+.+...-..-..++|++..++.++.....+..+++++++|+|.||+|.|+++..+.++..+.++...+.. .-..+.++
T Consensus 270 til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~--~~~~f~i~ 347 (438)
T COG2270 270 TILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLE--GELDFWIL 347 (438)
T ss_pred HHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHcc--ccHHHHHH
Confidence 3333334445569999999999999999999999999999999999999999999999888887776666 55667778
Q ss_pred HHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccC-chHHHHHHHHHHHHHHHHH
Q 011529 201 RVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG-WPSVFYSFGSLGTVWFTVW 277 (483)
Q Consensus 201 ~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-~~~~~~~~~~~~~~~~~~~ 277 (483)
.++.|+..|..+...-++..+.+|+++-++.+|+++..+..+..+||.+.+.+.+..| -|..+....++..+..+..
T Consensus 348 gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L 425 (438)
T COG2270 348 GLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLL 425 (438)
T ss_pred HHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhE
Confidence 8899999999999999999999999999999999999999999999999999988655 5655555555544444333
No 191
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.23 E-value=3.1e-10 Score=113.55 Aligned_cols=174 Identities=12% Similarity=0.041 Sum_probs=116.8
Q ss_pred HHHHHHHHHHHHhhhhhhhHHhhhh-hhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHH--------HHH
Q 011529 105 IVVLCFSAFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVL--------GFG 175 (483)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~--------~~~ 175 (483)
.++.+.+..+........+..++|. +.+.+|.+..+.+++.++..++..++.++.|+++||+++|+.. ..+
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 341 (465)
T TIGR00894 262 PVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNG 341 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHH
Confidence 3444455555555556666667777 4567899999999999999999999999999999998654321 111
Q ss_pred HHHH--HHHHHHhhhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHh
Q 011529 176 VVWW--SIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFL 253 (483)
Q Consensus 176 ~~~~--~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 253 (483)
.... ++..+...... .+.+..++...+.+.+.+...+.......|..| +.+|.+.++.+....+|..++|.+.|.+
T Consensus 342 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~l~~~i~p~l~g~~ 419 (465)
T TIGR00894 342 IGGLGPGIFAYALPYLS-AAFYLTIIILTLANAVSSGPLAGVLINSLDLAP-RFLGFIKGITGLPGFIGGLIASTLAGNI 419 (465)
T ss_pred HHHHHHHHHHHHHHHcC-CchHHHHHHHHHHHHHhhhhhhhhhhchhhcCh-hHHHHHHHHHHHHHHHHHHHHHHhhhee
Confidence 1111 11111111111 134444445555555555555555556667764 5899999999999999999999999988
Q ss_pred hhcc---CchHHHHHHHHHHHHHHHHHHHh
Q 011529 254 IHRF---GWPSVFYSFGSLGTVWFTVWLSK 280 (483)
Q Consensus 254 ~~~~---g~~~~~~~~~~~~~~~~~~~~~~ 280 (483)
.+.. +|+..|.+.++..++..++....
T Consensus 420 ~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~ 449 (465)
T TIGR00894 420 LSQDSKNVWLIVFLIMAFVNILCVIFYLIF 449 (465)
T ss_pred eCCCCchHHHHHHHHHHHHHHHHHHHeeee
Confidence 7653 38888888887777766555443
No 192
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.23 E-value=5.2e-10 Score=107.77 Aligned_cols=137 Identities=15% Similarity=0.076 Sum_probs=108.7
Q ss_pred hhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhc-CCchHHHHHHHHHHHHHHHhhhhhcccHHHH
Q 011529 119 DRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTV-GGKAVLGFGVVWWSIATALTPVAAKLGLPFL 197 (483)
Q Consensus 119 ~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l 197 (483)
.......++|.+.++.|.+..+.+.+.+...++..+++++.|++.||+ +||+.+..+.++.+++.+.+.+.+ +....
T Consensus 212 ~~~~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 289 (355)
T TIGR00896 212 LYYSLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAP--MHGLW 289 (355)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhh--hhHHH
Confidence 333445567777778899999999999999999999999999999999 566677777777777776666655 32222
Q ss_pred HHHHHHHhhhhhcchhHHHHHHhhhcC-CcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccC
Q 011529 198 LVVRVFMGIGEGVAMPAMNNILSKWVP-VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG 258 (483)
Q Consensus 198 ~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g 258 (483)
...++.|++.+...+...+.+.+..+ +++++...++.+....+|..++|.+.|.+.++.|
T Consensus 290 -~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 290 -AWALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred -HHHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 24567899998888887777766554 4667899999999999999999999999998766
No 193
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.23 E-value=6.2e-10 Score=97.49 Aligned_cols=169 Identities=11% Similarity=0.096 Sum_probs=121.2
Q ss_pred HHHHHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHH-H
Q 011529 105 IVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIA-T 183 (483)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~-~ 183 (483)
++.++++.+.+..+.....+ -..+.+.+|+|+...+.+.+.......+..++.|.++||+|++.+.+.+..+..+. -
T Consensus 268 ~~~iicv~yyva~fPFi~lg--~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H 345 (459)
T KOG4686|consen 268 VLVIICVLYYVAWFPFITLG--PMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGH 345 (459)
T ss_pred HHHHHHHHHHHHHHHHhhhh--HHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHh
Confidence 44444444444444333333 23478999999999999999988889999999999999999998877665544433 2
Q ss_pred HHhhhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccC---ch
Q 011529 184 ALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG---WP 260 (483)
Q Consensus 184 ~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g---~~ 260 (483)
....+ +++.-.+...+.|+..+......+..++...|+++.|++.|..+...++|..+.|+++|++.++-| |-
T Consensus 346 ~~l~F----t~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~l 421 (459)
T KOG4686|consen 346 SGLFF----TFLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNL 421 (459)
T ss_pred hhHHh----hhccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhH
Confidence 33333 334445667788888777766678889999999999999999999999999999999999998644 44
Q ss_pred HHHH-HHHHHHHHHHHHHHH
Q 011529 261 SVFY-SFGSLGTVWFTVWLS 279 (483)
Q Consensus 261 ~~~~-~~~~~~~~~~~~~~~ 279 (483)
.+|. +.+.+++....+.+.
T Consensus 422 e~ffl~~~~~aL~svgil~~ 441 (459)
T KOG4686|consen 422 EAFFLIIGLMALTSVGILFY 441 (459)
T ss_pred HHHHHHHHHHHHHHHHHHhh
Confidence 4444 344444444333333
No 194
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.22 E-value=2.5e-10 Score=111.67 Aligned_cols=151 Identities=15% Similarity=0.155 Sum_probs=116.7
Q ss_pred HHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHh-hcCCchHHHHHHHHHHHHHHHhhhhhcccHHHHHHHHH
Q 011529 124 SIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWAD-TVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRV 202 (483)
Q Consensus 124 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d-r~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 202 (483)
...+|.+.++.+.++.+.+++.++..++...+..+.+++.| |++.++.+..+.++.+++.+++.+.+ +++.+.+..+
T Consensus 228 ~~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~ 305 (400)
T PRK11646 228 MLMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVS--NLQQLFTLIC 305 (400)
T ss_pred HHhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhh--hHHHHHHHHH
Confidence 34567766666668888999988888777766666677665 46667777778777888777777777 7777777778
Q ss_pred HHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhcc---Cc-hHHHHHHHHHHHHHHHH
Q 011529 203 FMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF---GW-PSVFYSFGSLGTVWFTV 276 (483)
Q Consensus 203 l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~---g~-~~~~~~~~~~~~~~~~~ 276 (483)
+.+++.+...|...+++.+..|+++|++.+|+.+....+|..+||.++|++.++. +. ...+++.+++.++..+.
T Consensus 306 l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (400)
T PRK11646 306 LFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLLA 383 (400)
T ss_pred HHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHHH
Confidence 8888888888888999999999999999999999999999999999999999864 32 44555545555544443
No 195
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.20 E-value=2.2e-08 Score=102.29 Aligned_cols=157 Identities=19% Similarity=0.241 Sum_probs=127.3
Q ss_pred HhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhh-cCCchHHHHHHHHHHHHHHHhhhhhcc------cHHHH
Q 011529 125 IAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADT-VGGKAVLGFGVVWWSIATALTPVAAKL------GLPFL 197 (483)
Q Consensus 125 ~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~~~~~~~~~------~~~~l 197 (483)
.....+.+.+|.+......+...+.....+..+++|+++|+ +|+++.+.++.++..++.++.++.... .....
T Consensus 9 iLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~ 88 (654)
T TIGR00926 9 ILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLD 88 (654)
T ss_pred HHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHH
Confidence 33445566789999999999999888888999999999996 699999999999999998877664210 12346
Q ss_pred HHHHHHHhhhhhcchhHHHHHHhhhcCCc---chhHHHHHHHHHHHhHHHHHHhhHHHhhhcc-------CchHHHHHHH
Q 011529 198 LVVRVFMGIGEGVAMPAMNNILSKWVPVA---ERSRSLALVYSGMYLGSVTGLAFSPFLIHRF-------GWPSVFYSFG 267 (483)
Q Consensus 198 ~~~~~l~G~~~~~~~~~~~~~~~~~~~~~---~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-------g~~~~~~~~~ 267 (483)
+++..+..+|.|++-+...+...|.++++ +|.+.+.++..+.++|+.+++.+.+++.+.. +|...|.+.+
T Consensus 89 l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~ 168 (654)
T TIGR00926 89 LLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPA 168 (654)
T ss_pred HHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHH
Confidence 67788888999999999999999999754 3678889999999999999999999887443 6999999998
Q ss_pred HHHHHHHHHHHHhc
Q 011529 268 SLGTVWFTVWLSKA 281 (483)
Q Consensus 268 ~~~~~~~~~~~~~~ 281 (483)
++.++..++.....
T Consensus 169 i~m~ia~lvf~~g~ 182 (654)
T TIGR00926 169 ILMILALIVFMAGS 182 (654)
T ss_pred HHHHHHHHHHHHhc
Confidence 88888776665443
No 196
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.20 E-value=8.5e-10 Score=107.51 Aligned_cols=173 Identities=11% Similarity=0.005 Sum_probs=119.2
Q ss_pred HHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhh-h
Q 011529 110 FSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTP-V 188 (483)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~-~ 188 (483)
++.+++.+.....++..+|.+.++ ..+.........+..+...+..+++|+++||+|+|+++.++.+...++..... .
T Consensus 258 slly~~tFG~fvg~s~~lp~~~~~-~~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~ 336 (462)
T PRK15034 258 SLLYLATFGSFIGFSAGFAMLAKT-QFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLT 336 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HcChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHH
Confidence 333444444444455566664433 22333333334456778888999999999999999999988887777654322 2
Q ss_pred hhc---ccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCC---------------------cchhHHHHHHHHHHHhHHH
Q 011529 189 AAK---LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPV---------------------AERSRSLALVYSGMYLGSV 244 (483)
Q Consensus 189 ~~~---~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~---------------------~~r~~~~~~~~~~~~~g~~ 244 (483)
.+. .+++.+.+..+...++.|..+.....++.+.+|+ ++-|.+.|+....+.+|+.
T Consensus 337 lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf 416 (462)
T PRK15034 337 LPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGF 416 (462)
T ss_pred hccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccc
Confidence 221 1456666666666666677777788888888864 1568899999999999999
Q ss_pred HHHhhHHHhhhccC-chHHHHHHHHHHHHHHHHHHHhccC
Q 011529 245 TGLAFSPFLIHRFG-WPSVFYSFGSLGTVWFTVWLSKAHS 283 (483)
Q Consensus 245 ~g~~~~~~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (483)
+-|.+.|...+..| +...|+...+..+++.++.+....+
T Consensus 417 ~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~y~r 456 (462)
T PRK15034 417 FIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLVYGR 456 (462)
T ss_pred hhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99988777777654 7888888888888777766655444
No 197
>PRK09848 glucuronide transporter; Provisional
Probab=99.19 E-value=6.5e-10 Score=110.64 Aligned_cols=144 Identities=17% Similarity=0.132 Sum_probs=111.4
Q ss_pred HhhhhhhhHHhhhh-hhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhcccH
Q 011529 116 CNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGL 194 (483)
Q Consensus 116 ~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (483)
............|. +.+.+|.+....++......++..++.++++++.||+|+|+++.++.++.+++.+.+.+.+..++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~ 319 (448)
T PRK09848 240 VLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSL 319 (448)
T ss_pred HHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhH
Confidence 33333344444555 34457766655555555556778889999999999999999999999888888777666543356
Q ss_pred HHHHHHHHHHhhhhhcchhHHHHHHhhhcCCc-------chhHHHHHHHHHHHhHHHHHHhhHHHhhhccCc
Q 011529 195 PFLLVVRVFMGIGEGVAMPAMNNILSKWVPVA-------ERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGW 259 (483)
Q Consensus 195 ~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~-------~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~ 259 (483)
+.+++..++.|+|.+...+...++..|..+.+ ++|..+|+.+....+|..+|+.+.+.+.+..|+
T Consensus 320 ~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 320 PVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 77777788899999999999999999988654 358999999999999999999999998876665
No 198
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.16 E-value=1.8e-09 Score=105.57 Aligned_cols=137 Identities=11% Similarity=0.057 Sum_probs=95.4
Q ss_pred hhh-hhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhcccHHHHHHHHHHHh
Q 011529 127 ILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMG 205 (483)
Q Consensus 127 ~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G 205 (483)
.|. +.+++|.++.+.+.+.+...++..++.++.+++.||+|+|+.+.++.++..++.++..+.+ +.+..+....+.+
T Consensus 226 ~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~ 303 (392)
T PRK10473 226 SPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSP--SHAVSLFGITLIC 303 (392)
T ss_pred CHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHH
Confidence 344 5567899999999999999999999999999999999999999999888888887777665 4444444444444
Q ss_pred hhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHHHHHHH
Q 011529 206 IGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLG 270 (483)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~ 270 (483)
.+.+...+.. ...+..|.++|+ +.......++..+|+.+++++.+..|+.....+.+.+.
T Consensus 304 ~g~~~~~~~~--~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~~~g~~~~~~~~~~~~ 363 (392)
T PRK10473 304 AGFSVGFGVA--MSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAAVLGISAWNMLIGILI 363 (392)
T ss_pred HHHHHHhHHH--HHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHH
Confidence 4433333332 333444544443 44445566777788888888888788766555555434
No 199
>PRK10133 L-fucose transporter; Provisional
Probab=99.14 E-value=2.4e-09 Score=105.81 Aligned_cols=141 Identities=10% Similarity=0.034 Sum_probs=113.5
Q ss_pred hhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhcccHHHHHHHHHHHhhhhhc
Q 011529 131 SAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGV 210 (483)
Q Consensus 131 ~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~ 210 (483)
.+.+|.++.+.++....+.++..++.++.|++.||+|+|+++..+.++.+++.++..+.+ +. ..+....+.|++.+.
T Consensus 287 ~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~--~~-~~~~~~~l~glg~~~ 363 (438)
T PRK10133 287 EEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAG--GH-VGLIALTLCSAFMSI 363 (438)
T ss_pred hhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcC--Ch-HHHHHHHHHHHHHHH
Confidence 456899999999999999999999999999999999999999888877776666655555 43 234567789999999
Q ss_pred chhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccC-chHHHHHHHHHHHHHHHH
Q 011529 211 AMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG-WPSVFYSFGSLGTVWFTV 276 (483)
Q Consensus 211 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-~~~~~~~~~~~~~~~~~~ 276 (483)
.+|...+...+..++ +.+.+.++..+ ..+|..++|.+.|.+.+..| -+..|++..+..+.....
T Consensus 364 i~P~~~s~a~~~~~~-~~~~as~l~~~-~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~~~~ 428 (438)
T PRK10133 364 QYPTIFSLGIKNLGQ-DTKYGSSFIVM-TIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFIF 428 (438)
T ss_pred HHHHHHHHHHcccch-hhccchhHHhH-HhccchHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHH
Confidence 999999999998854 56777887764 55788889999999999887 788887665555554443
No 200
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.13 E-value=1.5e-09 Score=121.09 Aligned_cols=147 Identities=15% Similarity=0.182 Sum_probs=122.5
Q ss_pred hHHhhhh-hhhhcCCChh-hHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhcccHHHHHHH
Q 011529 123 MSIAILP-MSAEFNWNPA-TVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVV 200 (483)
Q Consensus 123 ~~~~~~~-~~~~~g~s~~-~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 200 (483)
....+|. +.+.+|.+.. +.+++.+...++.+++.++.|++.||+++++++.++.++.+++.+++.+.. +.+.+++.
T Consensus 251 ~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 328 (1146)
T PRK08633 251 AQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAP--SLASVLVL 328 (1146)
T ss_pred HHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhh--hHHHHHHH
Confidence 3344444 5677899998 999999999999999999999999999999999888888888888777777 78888888
Q ss_pred HHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhc-cCchHHHHHHHHHHH
Q 011529 201 RVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR-FGWPSVFYSFGSLGT 271 (483)
Q Consensus 201 ~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-~g~~~~~~~~~~~~~ 271 (483)
.++.|++.+...+...+++.+..|++.|++++|+.+....+|.++++.+++.+... +++...+++.+.+.+
T Consensus 329 ~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 400 (1146)
T PRK08633 329 FFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTL 400 (1146)
T ss_pred HHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 99999999988889999999999999999999999999999998888887766542 345555655554443
No 201
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.13 E-value=1.1e-09 Score=110.21 Aligned_cols=136 Identities=13% Similarity=0.171 Sum_probs=114.4
Q ss_pred hhhHHhhhhh-hhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhh--hhcccHHHH
Q 011529 121 VNMSIAILPM-SAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPV--AAKLGLPFL 197 (483)
Q Consensus 121 ~~~~~~~~~~-~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~l 197 (483)
......+|.+ .+.+|.++.+.++......++..++.++.|++.||+|||+++.++.++.+++..+..+ .+..+.+.+
T Consensus 272 ~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 351 (485)
T TIGR00711 272 YGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDTPFLAI 351 (485)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCCCHHHH
Confidence 3344456664 4558999999999999999999999999999999999999999998888888776652 222256677
Q ss_pred HHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhc
Q 011529 198 LVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR 256 (483)
Q Consensus 198 ~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 256 (483)
....++.|++.+...+.......+..|+++++++.|+.+....+|..+|+.+.+.+.++
T Consensus 352 ~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 352 ALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77788999999888877788888889999999999999999999999999999988775
No 202
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.13 E-value=4.1e-09 Score=102.89 Aligned_cols=147 Identities=17% Similarity=0.101 Sum_probs=114.9
Q ss_pred hhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhcccHHHHHHHHHHHhhhhh
Q 011529 130 MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEG 209 (483)
Q Consensus 130 ~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~ 209 (483)
+.+.+|.++.+.|++.+...++..+++++.+++.||.++|+++..+.+ .++..+...+.+ +++..++..++.|++.+
T Consensus 232 ~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~~~~~~--~~~~~~~~~~~~G~~~g 308 (393)
T PRK11195 232 APVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGIL-MGLVVLLMALQH--SLLPAYPLLILIGALGG 308 (393)
T ss_pred HHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHH-HHHHHHHHHHHh--HHHHHHHHHHHHHHhhh
Confidence 556689999999999999999999999999999999999988877753 344444445555 67777778889999988
Q ss_pred cchhHHHHHHhhhcCCcc-hhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHHHHHHh
Q 011529 210 VAMPAMNNILSKWVPVAE-RSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSK 280 (483)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~-r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 280 (483)
...+...+.+.+..|++. +|++.++.+....+|..++..+.+.+ +..|-+..+.+.++..++.+.+.+.+
T Consensus 309 ~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (393)
T PRK11195 309 FFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL-VKLGVPVVAVIVGFGLLVALAMALLW 379 (393)
T ss_pred hhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 888888888888765554 79999999999999999999998865 56777776666555555544444333
No 203
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=99.12 E-value=2.8e-07 Score=90.13 Aligned_cols=273 Identities=10% Similarity=0.031 Sum_probs=167.3
Q ss_pred HHHHHHHHHHHhhhhhhhHHhhhhhhhhcCC-----ChhhHHHHHHHHHHHHHHH-HhhHHHHHhhcCCchHHHHHHHHH
Q 011529 106 VVLCFSAFLLCNMDRVNMSIAILPMSAEFNW-----NPATVGLIQSSFFWGYLLT-QIAGGIWADTVGGKAVLGFGVVWW 179 (483)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-----s~~~~g~~~~~~~~~~~~~-~~~~g~l~dr~g~r~~~~~~~~~~ 179 (483)
+....+..|+..+..+. +-.+.+.+.+ +...+.++-+...+...+. .++.+++++|++|++++-+....+
T Consensus 9 ~~~~~l~fF~il~~Y~i----LR~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F 84 (472)
T TIGR00769 9 FLPLFLMFFCILFNYTI----LRDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPF 84 (472)
T ss_pred HHHHHHHHHHHHHHHHH----HHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHH
Confidence 44444444444444333 3345555544 4467889988887877766 899999999999999987766666
Q ss_pred HHHHHHhhhh--hc--c-------------------------cHHHHHHHHHHHhhhhhcchh-HHHHHHhhhcCCcchh
Q 011529 180 SIATALTPVA--AK--L-------------------------GLPFLLVVRVFMGIGEGVAMP-AMNNILSKWVPVAERS 229 (483)
Q Consensus 180 ~~~~~~~~~~--~~--~-------------------------~~~~l~~~~~l~G~~~~~~~~-~~~~~~~~~~~~~~r~ 229 (483)
....+++++. +. . +.|...+..+...+....... ..+.+..|.+..+|-.
T Consensus 85 ~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qak 164 (472)
T TIGR00769 85 LGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAK 164 (472)
T ss_pred HHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHH
Confidence 6665555443 10 0 123333444445554445554 7789999999999999
Q ss_pred HHHHHHHHHHHhHHHHHHhhHHHhhh-------cc-Cch----HHHHHHHHHHHHHHHHHHHhccCCCCCCCCCChhhHH
Q 011529 230 RSLALVYSGMYLGSVTGLAFSPFLIH-------RF-GWP----SVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKK 297 (483)
Q Consensus 230 ~~~~~~~~~~~~g~~~g~~~~~~l~~-------~~-g~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (483)
|.+++...+.++|.++++.+..++.+ .. .|. ..+.+.++..++...+.....+.. ..++.....++
T Consensus 165 Rfy~l~~~ganlg~i~sg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~- 242 (472)
T TIGR00769 165 RFYALFGLGANVALIFSGRTIKYFSKLRASLGPGVDGWHVSLKNLMVIVICSGLAIILLYWWVNRNV-LTDPRSYNPAL- 242 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cCCccccchhh-
Confidence 99999999999999999999888763 11 232 233333333333333333332222 11111000000
Q ss_pred HhhhcccCCCCCcccchhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcch----hhHHhHHHHHHHHHH
Q 011529 298 LIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTE----SGLFCVLPWLTMAFS 373 (483)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~----~~~~~~~~~~~~~i~ 373 (483)
.+++++.+.....+++.++++|-++.+.+...++....+.+....-...++.+- ++.+ .|.+....++..++.
T Consensus 243 --~~~k~k~k~~~~es~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~p-~~~~~~~f~g~~~~~~gi~tl~~ 319 (472)
T TIGR00769 243 --KEKKVKPKMSTMESLKFLVSSPYILDLALLVIAYGISINLVEVTWKSKLKAQYP-SPNEYSAFMGDFSTWTGVVSVTM 319 (472)
T ss_pred --ccccCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHHHH
Confidence 001111111223567788999999998888888888887777666666666442 3322 234444556666666
Q ss_pred HHHHHHHHHHHhhc
Q 011529 374 ANLGGWIADTLVSK 387 (483)
Q Consensus 374 ~~~~g~l~dr~g~~ 387 (483)
.++.+++.+|+|.+
T Consensus 320 ~l~~~~l~~~~Gw~ 333 (472)
T TIGR00769 320 MLLSGNVIRKYGWL 333 (472)
T ss_pred HHHHHHHHHHhhHH
Confidence 77779999999866
No 204
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.11 E-value=3.3e-09 Score=103.37 Aligned_cols=139 Identities=15% Similarity=0.255 Sum_probs=102.7
Q ss_pred hHHhhhh-hhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhc---ccHHHHH
Q 011529 123 MSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAK---LGLPFLL 198 (483)
Q Consensus 123 ~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~ 198 (483)
.....|. +.+++|.++.+.+++.+...++..++.++.|++.||+|+|+.+..+.++..++.+++.+... .+.+.++
T Consensus 225 ~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (385)
T TIGR00710 225 FFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSWAMII 304 (385)
T ss_pred HHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHH
Confidence 3444555 45678999999999999999999999999999999999999988887777776665544321 1344556
Q ss_pred HHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHh-HHHHHHhhHHHhhhccCchHHH
Q 011529 199 VVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYL-GSVTGLAFSPFLIHRFGWPSVF 263 (483)
Q Consensus 199 ~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~~~l~~~~g~~~~~ 263 (483)
+..++.|++.+...+.......|..| ++++++.++.+..... |.+.++. .+.+.+..+|...+
T Consensus 305 ~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~-~~~~~~~~~~~~~~ 368 (385)
T TIGR00710 305 GPMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYL-VSLIHGNTAWPMSL 368 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHH-HHhccccChHHHHH
Confidence 66778889888888888888888875 6899999998877765 4555554 44444434444333
No 205
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.10 E-value=1.8e-09 Score=120.17 Aligned_cols=150 Identities=12% Similarity=0.047 Sum_probs=119.4
Q ss_pred hhhHHhhhh-hhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhh----------
Q 011529 121 VNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVA---------- 189 (483)
Q Consensus 121 ~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~---------- 189 (483)
..+...+|. +.+.+|.++.+.|++.+...++.+++.++.|++.|+.++++.+..+.++.+++.+.+.+.
T Consensus 242 ~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 321 (1140)
T PRK06814 242 AVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQ 321 (1140)
T ss_pred HHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhccccccccccc
Confidence 334445566 455689999999999999999999999999999998887776666665555554433332
Q ss_pred ----------hcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhh-ccC
Q 011529 190 ----------AKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH-RFG 258 (483)
Q Consensus 190 ----------~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-~~g 258 (483)
. +.+.+++..++.|++.+...+...+++.+.+|++.||+++|..++...+|..+++++.+.+.+ ..+
T Consensus 322 ~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~ 399 (1140)
T PRK06814 322 LKSILVFLSKR--HGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGFS 399 (1140)
T ss_pred ccchhhhhccc--ccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 3 667788888999999999999999999999999999999999999999999999999998874 456
Q ss_pred chHHHHHHHHHHHH
Q 011529 259 WPSVFYSFGSLGTV 272 (483)
Q Consensus 259 ~~~~~~~~~~~~~~ 272 (483)
+...+++.+++.++
T Consensus 400 ~~~~~~~~~~~~~~ 413 (1140)
T PRK06814 400 IPWIILFIALANLI 413 (1140)
T ss_pred HHHHHHHHHHHHHH
Confidence 66666655554433
No 206
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.10 E-value=4.8e-09 Score=101.08 Aligned_cols=162 Identities=11% Similarity=-0.038 Sum_probs=111.0
Q ss_pred HHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCC---chHHH-HHHHHHHHHHH
Q 011529 109 CFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGG---KAVLG-FGVVWWSIATA 184 (483)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~---r~~~~-~~~~~~~~~~~ 184 (483)
+.+..++.......+..++|.+.++.|.+.. .+...++..+...++ .++++||..| |+... ...++.++...
T Consensus 197 ~~~~~~~~~~~~~~~~~wlp~~L~~~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~ 272 (368)
T TIGR00903 197 IGAILGFGVALFDNLAIWLEAALRPAGLEDI-AGDAVALAILAGLIG---VAVIPDRVARAGLRSIYIRAAALLIAAFFL 272 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCChH-HHHHHHHHHHHHHHH---HHHhhHHhhhhhhHHHHHHHHHHHHHHHHH
Confidence 3344444445555566778887788888764 566665655555555 4677777654 33333 23444444444
Q ss_pred HhhhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHH
Q 011529 185 LTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFY 264 (483)
Q Consensus 185 ~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~ 264 (483)
...+.. +.+..++...+.+++.....+...++.+|.+|++.|+++.|+.+....+|..++|.+.+.+.. +.+..|.
T Consensus 273 ~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~~~~~f~ 348 (368)
T TIGR00903 273 ALAFEL--NRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS--SAEAYFT 348 (368)
T ss_pred HHHHcc--ccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc--CHHHHHH
Confidence 444444 444445556667777777778888999999999999999999999999999999999887773 6677788
Q ss_pred HHHHHHHHHHHHHH
Q 011529 265 SFGSLGTVWFTVWL 278 (483)
Q Consensus 265 ~~~~~~~~~~~~~~ 278 (483)
+.++..++..+..+
T Consensus 349 ~~~~~~~i~~~~~~ 362 (368)
T TIGR00903 349 FLAILITIAFAIAL 362 (368)
T ss_pred HHHHHHHHHHHHHH
Confidence 87777777666554
No 207
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.10 E-value=4.7e-09 Score=105.10 Aligned_cols=150 Identities=11% Similarity=0.024 Sum_probs=112.6
Q ss_pred HHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhh-
Q 011529 110 FSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPV- 188 (483)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~- 188 (483)
....++............+.+.+....+....+++.++..++.+++.++++++.||+|+|+.+.++.++..++.+...+
T Consensus 237 l~~~~~~~~~~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~ 316 (473)
T PRK10429 237 LGMALAYNIASNIINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLM 316 (473)
T ss_pred HHHHHHHHHHHHHHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444444455555555655555446677788888888899999999999999999999998888776655544432
Q ss_pred --hhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcC-------CcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCc
Q 011529 189 --AAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVP-------VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGW 259 (483)
Q Consensus 189 --~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~-------~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~ 259 (483)
....+.+.+++..++.|++.+...+...++++|..+ .++.|..+|......-+|..+++.+.|++.+..|+
T Consensus 317 ~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 317 GLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred hccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 122256777777888999999999999999999865 33346689999999999999999999999876665
No 208
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.10 E-value=1.9e-09 Score=108.61 Aligned_cols=134 Identities=13% Similarity=0.120 Sum_probs=113.4
Q ss_pred hhHHhhhh-hhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhh-cccHHHHHH
Q 011529 122 NMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAA-KLGLPFLLV 199 (483)
Q Consensus 122 ~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~ 199 (483)
.....+|. +++.+|.++.+.|+......++..++.++.|++.||+|+|+.+..+.++.+++.+++.+.. ..+.+...+
T Consensus 277 ~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~ 356 (495)
T PRK14995 277 GFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQWQAWG 356 (495)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCchHHHHH
Confidence 34445565 5566899999999999999999999999999999999999999888888877766554322 125566677
Q ss_pred HHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhh
Q 011529 200 VRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH 255 (483)
Q Consensus 200 ~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 255 (483)
..++.|++.+...+.....+.+..|+++++.+.++.+....+|..+|+.+.+.+.+
T Consensus 357 ~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 357 LMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88899999999888888889999999999999999999999999999999998875
No 209
>PRK11043 putative transporter; Provisional
Probab=99.09 E-value=8.4e-09 Score=101.17 Aligned_cols=138 Identities=14% Similarity=0.117 Sum_probs=104.3
Q ss_pred HHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHh---hhhhcccHHHHHHH
Q 011529 124 SIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALT---PVAAKLGLPFLLVV 200 (483)
Q Consensus 124 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~ 200 (483)
....|.+.+++|.++.+.|+......++..++.++.+++.||+++|+.+....+..+++.+.+ ......+.+.+++.
T Consensus 223 ~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (401)
T PRK11043 223 LTGSPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIP 302 (401)
T ss_pred HHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHH
Confidence 344677777889999999998888889999999999999999999987655555444443322 22111145556666
Q ss_pred HHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHH
Q 011529 201 RVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSV 262 (483)
Q Consensus 201 ~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~ 262 (483)
..+.|++.+..++...+...+..| ++++++.|+.+.....+...++.+.+.+.+.......
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~ 363 (401)
T PRK11043 303 FCVMAAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALISTPLLTTG 363 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccCCChhHHH
Confidence 778888888888888888777774 6899999999999888999999999888775444433
No 210
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.08 E-value=1.2e-09 Score=105.01 Aligned_cols=131 Identities=18% Similarity=0.257 Sum_probs=109.4
Q ss_pred hhhhhhhHHhhhhh-hhhcCCC-hhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhcc-c
Q 011529 117 NMDRVNMSIAILPM-SAEFNWN-PATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKL-G 193 (483)
Q Consensus 117 ~~~~~~~~~~~~~~-~~~~g~s-~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~-~ 193 (483)
..........+|.+ .+++|.+ ..+.+.+.++..+...++.++.|++.||+++|+..........+..+...+.... +
T Consensus 219 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (352)
T PF07690_consen 219 FFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSSS 298 (352)
T ss_dssp HHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCH
T ss_pred HHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 33444466667774 8889999 8999999999999999999999999999999888777777766666655544321 4
Q ss_pred HHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHH
Q 011529 194 LPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGL 247 (483)
Q Consensus 194 ~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 247 (483)
....++..++.|++.+...+...+++.+.+|+++|+++.|+.+...++|..+||
T Consensus 299 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 299 PVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 566777888899999999999999999999999999999999999999999987
No 211
>PRK09669 putative symporter YagG; Provisional
Probab=99.07 E-value=3.2e-09 Score=105.48 Aligned_cols=135 Identities=12% Similarity=0.093 Sum_probs=101.1
Q ss_pred HhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhcccHHHHHHHHHHH
Q 011529 125 IAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFM 204 (483)
Q Consensus 125 ~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~ 204 (483)
...+++.++.-.++...+.+.....+...++.++++++.||+|+|+.+..+.++.++..+...+.+..+.+.+++..++.
T Consensus 250 ~~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 329 (444)
T PRK09669 250 GATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILF 329 (444)
T ss_pred hhhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHH
Confidence 33344444332234445556667778888899999999999999999988877666544333333222677778888899
Q ss_pred hhhhhcchhHHHHHHhhhcCC-------cchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCc
Q 011529 205 GIGEGVAMPAMNNILSKWVPV-------AERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGW 259 (483)
Q Consensus 205 G~~~~~~~~~~~~~~~~~~~~-------~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~ 259 (483)
|++.+...+...++++|..+. ++.|..+|..+....+|..+|+.++|.+.+..|+
T Consensus 330 g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 330 NFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999999998852 2346778999999999999999999999887766
No 212
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.07 E-value=1.5e-08 Score=92.65 Aligned_cols=167 Identities=13% Similarity=0.073 Sum_probs=135.0
Q ss_pred HHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhc-CCchHHHHHHHHHHHHHHHhhhhhc
Q 011529 113 FLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTV-GGKAVLGFGVVWWSIATALTPVAAK 191 (483)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~~ 191 (483)
.-++....+....++|.+..|.|+|..+.|.+.+...+......+....+++|. .+|+..+...+++.++.+.+.+.+.
T Consensus 217 mGlqS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~ 296 (395)
T COG2807 217 MGLQSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPG 296 (395)
T ss_pred HHhhHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhh
Confidence 334555566677789999999999999999999999999999999999999975 5677777788888888888877763
Q ss_pred ccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCC-cchhHHHHHHHHHHHhHHHHHHhhHHHhhhccC-chHHHHHHHHH
Q 011529 192 LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPV-AERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG-WPSVFYSFGSL 269 (483)
Q Consensus 192 ~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-~~~~~~~~~~~ 269 (483)
.+++ ...++.|+|.|..++.....+.+..++ ++-++..|+.+..+.+=..+||.+.|++.|..| |+......+..
T Consensus 297 ~~~~---lw~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~ 373 (395)
T COG2807 297 QLPI---LWALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALA 373 (395)
T ss_pred hHHH---HHHHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHH
Confidence 2222 225899999999999999999888764 566788888899999999999999999999765 99888887777
Q ss_pred HHHHHHHHHHhcc
Q 011529 270 GTVWFTVWLSKAH 282 (483)
Q Consensus 270 ~~~~~~~~~~~~~ 282 (483)
.++..+.-+..-+
T Consensus 374 ~i~m~i~Gl~a~r 386 (395)
T COG2807 374 TLLMLIFGLRAGR 386 (395)
T ss_pred HHHHHHHHhhcch
Confidence 7776666555433
No 213
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=99.07 E-value=1.3e-09 Score=104.12 Aligned_cols=165 Identities=16% Similarity=0.140 Sum_probs=143.3
Q ss_pred HHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhccc
Q 011529 114 LLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLG 193 (483)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~ 193 (483)
++.+........++-...++.+..+...|........+-++.-++.+++.+|+|+-+++..++.+..+=.+...... |
T Consensus 381 v~mG~g~~lv~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~--n 458 (618)
T KOG3762|consen 381 VVMGAGVGLVFTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQ--N 458 (618)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhc--C
Confidence 33444444455555557788888888889888888899999999999999999999999999999999888888888 9
Q ss_pred HHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHH-HHHHhHHHHHHhhHHHhhhccCchHHHHHHHHHHHH
Q 011529 194 LPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVY-SGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTV 272 (483)
Q Consensus 194 ~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~ 272 (483)
.|..+..-+++|+..+..+.+..+|+++..||+-|..+.++.+ ...++|-.+|.+++|.+.+.++-+..|.+.++.+++
T Consensus 459 ~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~ 538 (618)
T KOG3762|consen 459 PWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLV 538 (618)
T ss_pred chheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999965 556799999999999999999999999999988887
Q ss_pred HHHHHHHh
Q 011529 273 WFTVWLSK 280 (483)
Q Consensus 273 ~~~~~~~~ 280 (483)
.+++....
T Consensus 539 ~l~~~~~i 546 (618)
T KOG3762|consen 539 TLALFISI 546 (618)
T ss_pred HHHHHHHh
Confidence 76665543
No 214
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.06 E-value=6.1e-09 Score=102.97 Aligned_cols=154 Identities=15% Similarity=0.113 Sum_probs=125.4
Q ss_pred HHHHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHH
Q 011529 106 VVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATAL 185 (483)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 185 (483)
+..+.+..++............+++.++.--++...+.+..+..++..++.+++++++||+|+|+.+..+.++.+++.++
T Consensus 227 ~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~ 306 (428)
T PF13347_consen 227 FRILLLAFFLQWLAFALMNTFLPYYFTYVLGNEGLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLL 306 (428)
T ss_pred HHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHH
Confidence 33444555555666666666666655553334467888888999999999999999999999999999999999999888
Q ss_pred hhhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCC-------cchhHHHHHHHHHHHhHHHHHHhhHHHhhhccC
Q 011529 186 TPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPV-------AERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG 258 (483)
Q Consensus 186 ~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~-------~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g 258 (483)
..+.+..+.+.+++..++.|++.+..+....++++|..+. ++.|..+|..+....+|..+++.+.+.+.+..|
T Consensus 307 ~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~G 386 (428)
T PF13347_consen 307 LFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVG 386 (428)
T ss_pred HHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhC
Confidence 8777534889999999999999999999999999998863 345899999999999999999999998887655
Q ss_pred c
Q 011529 259 W 259 (483)
Q Consensus 259 ~ 259 (483)
+
T Consensus 387 y 387 (428)
T PF13347_consen 387 Y 387 (428)
T ss_pred c
Confidence 4
No 215
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=99.04 E-value=1.7e-08 Score=94.77 Aligned_cols=271 Identities=14% Similarity=0.080 Sum_probs=163.5
Q ss_pred hhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhh----cCCchHHH-HHHHHHHHHHHHhhhhhc
Q 011529 117 NMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADT----VGGKAVLG-FGVVWWSIATALTPVAAK 191 (483)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr----~g~r~~~~-~~~~~~~~~~~~~~~~~~ 191 (483)
.+....-..+.+++.++.|++....+.+..+.-+...+.+|+.|..+|| +||||.++ .+.+...++.++..++..
T Consensus 45 qf~wA~elsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaD 124 (498)
T KOG0637|consen 45 QFGWALELSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAAD 124 (498)
T ss_pred HHHHHHHhccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhh
Confidence 3344444456777888999999999999999999999999999999995 78887755 455566666666665541
Q ss_pred c---------------cHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhH-HHHHHHHHHHhHHHHHHhhHHHhhh
Q 011529 192 L---------------GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSR-SLALVYSGMYLGSVTGLAFSPFLIH 255 (483)
Q Consensus 192 ~---------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~-~~~~~~~~~~~g~~~g~~~~~~l~~ 255 (483)
. ....+++..-+.-++.......+-+++.|+..++++.+ +++++..+..+|+.+|..++++.
T Consensus 125 ig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y~-- 202 (498)
T KOG0637|consen 125 IGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSYL-- 202 (498)
T ss_pred hhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeeccccc--
Confidence 1 12334455556666777888899999999998777777 99999999999999999888733
Q ss_pred ccCch--HHHHHHHHHHHHHHHHH-------HHhccCC------CCCCCCCChhhHHHhhhcccCCCCCcccchhhh-hc
Q 011529 256 RFGWP--SVFYSFGSLGTVWFTVW-------LSKAHSS------PAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLI-LS 319 (483)
Q Consensus 256 ~~g~~--~~~~~~~~~~~~~~~~~-------~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 319 (483)
+|+ ..|.....+.+.+..+- -+....+ +++++...+. ...+....+.+.-...+..+ ..
T Consensus 203 --~~~~~~~Ft~~~~~~~~C~~~~~~~~~~v~L~~i~~~~~l~~~~~~~~s~~~---~~~~~~~~~~~~~~e~fG~~~~m 277 (498)
T KOG0637|consen 203 --GLYKIFPFTLTTACDLYCANLKLCFFLEVTLLLIETSESLWYPQEKPLSPKG---TTARSKSSKLPFLLEIFGALKVM 277 (498)
T ss_pred --CceEEeehHHHHHHHHHHHHHHHHHHHhhhhhheecccccccccccCCCCCc---ccccccccCcchHHHHhchHhhC
Confidence 332 12222111111111100 0000000 0010000000 00000000000000011112 23
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHhhHHHHHHH-hCCCcch----------------hhHHhHHHHHHHHHHHHHHHHHHH
Q 011529 320 KPPVWALIVSHFCHNWGTFILLTWMPTYYNQV-LHFNLTE----------------SGLFCVLPWLTMAFSANLGGWIAD 382 (483)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~----------------~~~~~~~~~~~~~i~~~~~g~l~d 382 (483)
.+..|.+++...+...+...+..+...++-+. ++-++.. -.+-..++.+...+.++...++.+
T Consensus 278 pr~m~~L~i~~lltW~a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~~~Y~~GV~~G~~GL~ins~~lgi~S~~~~~l~~ 357 (498)
T KOG0637|consen 278 PRPMRMLLIVTLLTWIAWFPFLLFDTDFMGREVYGGDPKADENSEAKKLYNAGVRMGCLGLMLNSIVLGIYSLLVEKLSR 357 (498)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhCCCCCCCcchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 56688888888888888888877777666543 3333221 123445566677778888999999
Q ss_pred HHhhcCCchhHH
Q 011529 383 TLVSKGLSVTTV 394 (483)
Q Consensus 383 r~g~~~~~~~~~ 394 (483)
|+|.|+.+..+.
T Consensus 358 ~~g~r~~y~~~~ 369 (498)
T KOG0637|consen 358 KFGTRKRYWGGV 369 (498)
T ss_pred hcCcceEEeehh
Confidence 999666555544
No 216
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.03 E-value=1.5e-08 Score=98.49 Aligned_cols=128 Identities=16% Similarity=0.060 Sum_probs=89.0
Q ss_pred hHHhhhh-hhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhh--hcccHHHHHH
Q 011529 123 MSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVA--AKLGLPFLLV 199 (483)
Q Consensus 123 ~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~ 199 (483)
+....|. +.+++|.++.+.+++.+...++..++.++.|++.||+|+|+.+..+..+..+..+..... ...+.+...+
T Consensus 213 ~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (377)
T PRK11102 213 FLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWALVV 292 (377)
T ss_pred HHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 3334444 566789999999999999999999999999999999999999888876654433222211 1114455555
Q ss_pred HHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHH-HHhHHHHHHhhHH
Q 011529 200 VRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSG-MYLGSVTGLAFSP 251 (483)
Q Consensus 200 ~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-~~~g~~~g~~~~~ 251 (483)
...+.+.+.+.........+.|..| ++++++.++.+.. ..+|..+++.+++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~~~ 344 (377)
T PRK11102 293 GVAAFVGCVSMISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALLSL 344 (377)
T ss_pred HHHHHHHHHHHhhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5545555555555666667777764 8899999986654 4567777776654
No 217
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.03 E-value=5.1e-09 Score=100.89 Aligned_cols=123 Identities=15% Similarity=0.096 Sum_probs=98.6
Q ss_pred hhhhhhHHhhhhhhhhcCCChhhHHHHHHHHH-HHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhh-hc----
Q 011529 118 MDRVNMSIAILPMSAEFNWNPATVGLIQSSFF-WGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVA-AK---- 191 (483)
Q Consensus 118 ~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~-~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-~~---- 191 (483)
..........|.+.+++|.+..+.+.+.++.. ++..++.+++|++.||+|+|+.+..+.++.+++..+..+. ..
T Consensus 223 ~~~~~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 302 (356)
T TIGR00901 223 LGDSAATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHD 302 (356)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 33334445566666669999999998887765 6778999999999999999999888888877776655443 10
Q ss_pred ----ccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHH
Q 011529 192 ----LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMY 240 (483)
Q Consensus 192 ----~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 240 (483)
.+.+.+..+.++.+++.+...+...+++.|.+|+++|++.+|+.+...+
T Consensus 303 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 303 GITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred ccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 1457777888899999999999999999999999999999999887654
No 218
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.97 E-value=1.8e-08 Score=87.64 Aligned_cols=316 Identities=14% Similarity=0.104 Sum_probs=174.6
Q ss_pred hhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhcccHHH
Q 011529 117 NMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPF 196 (483)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (483)
..+...-+|.+-.+.+.+|....++|.+..+......+...+.|.++||-|||+.-+.-++.+.++++. -.++ .+-.
T Consensus 50 mAgDWLQgPYvYyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCiT-KhSp--qYkV 126 (454)
T KOG4332|consen 50 MAGDWLQGPYVYYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCIT-KHSP--QYKV 126 (454)
T ss_pred HhhhhhcCceeeeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHHh-hcCC--ceEE
Confidence 344455667777788899999999999999888889999999999999999999876666666555543 3455 7888
Q ss_pred HHHHHHHHhhhhhcchhHHHHHH-hhhcCCcchhHHHHHHH--------HHHHhHHHHHHhhHHHhhhccC--chHHHHH
Q 011529 197 LLVVRVFMGIGEGVAMPAMNNIL-SKWVPVAERSRSLALVY--------SGMYLGSVTGLAFSPFLIHRFG--WPSVFYS 265 (483)
Q Consensus 197 l~~~~~l~G~~~~~~~~~~~~~~-~~~~~~~~r~~~~~~~~--------~~~~~g~~~g~~~~~~l~~~~g--~~~~~~~ 265 (483)
++++|++.|+..+..+.+..++. .|.. ++|+.-.-+.. .+..+-.+++.+.+..+.+.++ .-.+|-.
T Consensus 127 LmVGR~LGGiaTsLLFSaFEsWliaEHn--ekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdA 204 (454)
T KOG4332|consen 127 LMVGRVLGGIATSLLFSAFESWLIAEHN--EKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDA 204 (454)
T ss_pred EeehhhhhhHHHHHHHHHHHHHHHHHhh--hccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHH
Confidence 99999999999999998888764 4443 33332222211 2333444455555555666543 4455555
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChhHHHHHHHHHHHHHHHHHHH-Hhh
Q 011529 266 FGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILL-TWM 344 (483)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 344 (483)
.+.+..+...+.+.-..+.-.+..+. ++-.... +...+.+..++++..+..+..++-...+.+. .|.
T Consensus 205 AacfLaigmAvil~~W~ENygdps~~-kdlltqf-----------~gaa~aiaSD~ki~LLG~iqsLFE~smytFVFLWT 272 (454)
T KOG4332|consen 205 AACFLAIGMAVILSSWSENYGDPSEN-KDLLTQF-----------KGAARAIASDEKIALLGAIQSLFEGSMYTFVFLWT 272 (454)
T ss_pred HHHHHHHHHHHHHhhhhhccCChhhh-HHHHHHh-----------hHhHHHHhcchHHHHHHHHHHHHhhhhheeeeeec
Confidence 44444444433333222221111111 1100000 1123345667776665555555444444433 344
Q ss_pred HHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhc-----cchh
Q 011529 345 PTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSH-----VDSP 419 (483)
Q Consensus 345 ~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 419 (483)
|..--+. ...--|.+++.+.++.++|+-+..++..|-..|--. . ..+........+.+..... ...+
T Consensus 273 PaLspn~---e~iPhGfiFatFMlASmLGSSla~Rl~s~s~~~ve~---y--mqivf~vs~a~l~Lpilt~~vsP~kes~ 344 (454)
T KOG4332|consen 273 PALSPND---EEIPHGFIFATFMLASMLGSSLASRLLSRSSPKVES---Y--MQIVFLVSIAALLLPILTSSVSPSKESP 344 (454)
T ss_pred ccCCCCc---ccCCchhHHHHHHHHHHHhhHHHHHHHhcCCcccch---H--HHHHHHHHHHHHHHHHHHhccCCCcCCc
Confidence 4332111 122347888888888888887777776654333111 1 1111111112222211111 1223
Q ss_pred HHHHHHHHHhhhhhhhhhchhhhhHhhhccC-cceeeee
Q 011529 420 AMAVLCMACSQGTDAFSQSGLYSNHQDIAPR-YSVSIIS 457 (483)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g 457 (483)
...++.++..-.+.+...|.+.-.-.+..|+ +|.+.+.
T Consensus 345 ~~s~i~F~~~E~cvGlfwPSimkmRsqyIPEearstimN 383 (454)
T KOG4332|consen 345 SESLIGFCLFEACVGLFWPSIMKMRSQYIPEEARSTIMN 383 (454)
T ss_pred hHHHHHHHHHHHHHhhcchHHHHHHHhhCCHHHHhhhhh
Confidence 3334444444455556666666665565554 4555543
No 219
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=98.96 E-value=1.7e-07 Score=85.87 Aligned_cols=264 Identities=10% Similarity=-0.065 Sum_probs=167.0
Q ss_pred HHHHHHHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHh-----hcCCchHHH-HHH
Q 011529 103 WFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWAD-----TVGGKAVLG-FGV 176 (483)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d-----r~g~r~~~~-~~~ 176 (483)
...+..+.+.+.+++...+... .+|.+.+.-|.|.++.+....++. .. ..-++|.++.| |+||||..+ -+.
T Consensus 30 ~~~illLl~LYllQGiP~GL~~-~iP~lL~ak~vSyt~~a~fS~ay~-P~-sLKllWaPiVDs~y~k~~GrrksWvvp~q 106 (510)
T KOG3574|consen 30 RSSILLLLFLYLLQGIPLGLIG-AIPLLLQAKGVSYTSQAIFSFAYW-PF-SLKLLWAPIVDSVYSKRFGRRKSWVVPCQ 106 (510)
T ss_pred hhhHHHHHHHHHHcCCchhHhh-hhHHHhcCCCcchhhhhhhhhhhh-HH-HHHHHHHhhhHHHHHHhhccccceeeehH
Confidence 3346666777888999888888 899999988999988887654443 22 34788999999 999988633 233
Q ss_pred HHHHHHHHHhhhhhc---------ccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHH
Q 011529 177 VWWSIATALTPVAAK---------LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGL 247 (483)
Q Consensus 177 ~~~~~~~~~~~~~~~---------~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 247 (483)
.+.+..+..++...+ ++...+....++.-+..+....+...+.-.+..+++.|-+......+..+|.+++.
T Consensus 107 ~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~ 186 (510)
T KOG3574|consen 107 YLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGN 186 (510)
T ss_pred HHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhc
Confidence 333333333322110 12333333456667777778888899998999899988888777777777777775
Q ss_pred hhHHHhhh-------ccCc---------hHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcc
Q 011529 248 AFSPFLIH-------RFGW---------PSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKT 311 (483)
Q Consensus 248 ~~~~~l~~-------~~g~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (483)
.+--.+.. ..+| ...+++.+.+.+++..+..+..++++.+..++.+....+ ..
T Consensus 187 ~ifLaL~s~dF~N~y~rs~P~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~~~~~~e~~~~i~~-----------~y 255 (510)
T KOG3574|consen 187 VVFLALESPDFCNTYLRSIPLDQGFITLAGYLWFWGALFIVATTLVALLKKENDESVDEELELGIHE-----------SY 255 (510)
T ss_pred ceeeEecChhhhhHHHhcCcCccceEEhhHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhcCHHH-----------HH
Confidence 54322221 0112 233455566666666665555554433311111100000 01
Q ss_pred cchhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHH
Q 011529 312 IPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIA 381 (483)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~ 381 (483)
.-++++++-|.+..+.......-.++.+-....+.-+.| .|.+..+-+++.....-..++.....|++.
T Consensus 256 k~l~~vLklk~v~~la~i~lt~K~gf~a~da~t~LkLle-~Gv~ke~Lal~~v~~~plqI~l~~~~gk~t 324 (510)
T KOG3574|consen 256 KLLRDVLKLKSVRWLAGILLTGKLGFQAADALTSLKLLE-HGVPKEELALIAVPLVPLQIALPLYIGKWT 324 (510)
T ss_pred HHHHHHHcCccHHHHHHHHHHHHHHhhhhhhccchHHHH-cCCChhHheeeeeehhhHHHhhhhhheeec
Confidence 135567788888888888888888888888888888888 799999888776444444444444444443
No 220
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.93 E-value=2e-08 Score=98.54 Aligned_cols=178 Identities=9% Similarity=0.053 Sum_probs=127.8
Q ss_pred HHHHHHHHHHHHHhhhhhhhHHhhhh-hhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCC---------chHHH
Q 011529 104 FIVVLCFSAFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGG---------KAVLG 173 (483)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~---------r~~~~ 173 (483)
..++.+.+..+........+...+|. +.+.+|.+..+.|++.++..+...+..+++|.++||.-+ |..-.
T Consensus 258 ~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~ 337 (466)
T KOG2532|consen 258 PPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNT 337 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHh
Confidence 35667777788888888888888888 566799999999999999999999999999999998755 22234
Q ss_pred HHHHHHHHHHHHhhhhhcccHHHHHHHHHHHhhhh-hcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHH
Q 011529 174 FGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGE-GVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPF 252 (483)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~-~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 252 (483)
++....+++.+.+++.+..+.+..+++ +..+.+. |...+....-..|. .++.-+..+|+.+....+..+++|.+.+.
T Consensus 338 i~~~~~ai~l~~l~~~~~~~~~~a~~~-l~~~~~~~g~~~~Gf~~~~~~~-apq~a~~l~g~~~~~~~~~~~~~P~~vg~ 415 (466)
T KOG2532|consen 338 IAFGGPAVFLLVLAFTSDEHRLLAVIL-LTIAIGLSGFNISGFYKNHQDI-APQHAGFVMGIINFVGALAGFIAPLLVGI 415 (466)
T ss_pred HHHHHHHHHHHeeeecCCCcchHHHHH-HHHHHHHcccchhhhHhhhhhc-cchHHHHHHHHHHHHHHHHHHHHHHheee
Confidence 555566666666666653222122222 2222222 33333333333333 37888999999999999999999999999
Q ss_pred hhhc---cCchHHHHHHHHHHHHHHHHHHHhccC
Q 011529 253 LIHR---FGWPSVFYSFGSLGTVWFTVWLSKAHS 283 (483)
Q Consensus 253 l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (483)
+.+. ..|+..|++.+++.++..+...++-..
T Consensus 416 ~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f~s~ 449 (466)
T KOG2532|consen 416 IVTDNTREEWRIVFLIAAGILIVGNIIFLFFGSG 449 (466)
T ss_pred EeCCCCHHHHHHHHHHHHHHHHHhchheeEeecC
Confidence 9842 369999999999988887666655433
No 221
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.92 E-value=4.7e-08 Score=94.23 Aligned_cols=153 Identities=14% Similarity=0.084 Sum_probs=124.3
Q ss_pred HHHHHHHHHHhhhhhhhHHhhhhh-hhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHH
Q 011529 107 VLCFSAFLLCNMDRVNMSIAILPM-SAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATAL 185 (483)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 185 (483)
...++..++........+....++ .-.+|.+..+..+.......+.+++.+++.++.+|+|+|+++.++.++.+++.++
T Consensus 239 ~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~ 318 (467)
T COG2211 239 LLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLL 318 (467)
T ss_pred HHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHH
Confidence 333445555555666666666664 3446777777888888888888888999999999999999999999999999999
Q ss_pred hhhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCC-------cchhHHHHHHHHHHHhHHHHHHhhHHHhhhccC
Q 011529 186 TPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPV-------AERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG 258 (483)
Q Consensus 186 ~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~-------~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g 258 (483)
..+.+..+.+.+++..++.+++.+...+...++++|..+- +.-|...+......-+|..++..+.|++++..|
T Consensus 319 ~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~G 398 (467)
T COG2211 319 LYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAIG 398 (467)
T ss_pred HHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 8888765788888999999999999999999999988753 334788888999999999999999999887666
Q ss_pred c
Q 011529 259 W 259 (483)
Q Consensus 259 ~ 259 (483)
+
T Consensus 399 y 399 (467)
T COG2211 399 Y 399 (467)
T ss_pred C
Confidence 4
No 222
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.91 E-value=1e-07 Score=95.28 Aligned_cols=175 Identities=14% Similarity=0.105 Sum_probs=125.7
Q ss_pred HHHHHHHHHHhhhhhhhHHhhhhhh-hhcCCCh----hhHHHHHHHHHHHHHHHHhhHHH----HHhh-cCCchHH--HH
Q 011529 107 VLCFSAFLLCNMDRVNMSIAILPMS-AEFNWNP----ATVGLIQSSFFWGYLLTQIAGGI----WADT-VGGKAVL--GF 174 (483)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~----~~~g~~~~~~~~~~~~~~~~~g~----l~dr-~g~r~~~--~~ 174 (483)
..+++..++.+.........++... ++.+.+. -..+++.++..+...+.+++..+ +.|| .+.+... .+
T Consensus 275 l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~ 354 (475)
T TIGR00924 275 IVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTL 354 (475)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHH
Confidence 3334444343444444444445433 3233322 22678888888888888888665 4443 2233333 67
Q ss_pred HHHHHHHHHHHhhhh-------hcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHH
Q 011529 175 GVVWWSIATALTPVA-------AKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGL 247 (483)
Q Consensus 175 ~~~~~~~~~~~~~~~-------~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 247 (483)
|.++.+++.+...+. ...+++++++..++.++|.....|...+++.+..|++.|++.+|++.....+|..+++
T Consensus 355 G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~ 434 (475)
T TIGR00924 355 GMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGG 434 (475)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888877766541 0128899999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHhhhccCchHHHHHHHHHHHHHHHHHHHhc
Q 011529 248 AFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKA 281 (483)
Q Consensus 248 ~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 281 (483)
.+........+|...|...++..++..++.++..
T Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (475)
T TIGR00924 435 YLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMV 468 (475)
T ss_pred HHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHH
Confidence 9988877777888888888877777666655543
No 223
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.90 E-value=8.2e-08 Score=94.09 Aligned_cols=145 Identities=12% Similarity=0.009 Sum_probs=106.2
Q ss_pred hHHhhhhhhhhc--CCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhcccHHHHHHH
Q 011529 123 MSIAILPMSAEF--NWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVV 200 (483)
Q Consensus 123 ~~~~~~~~~~~~--g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 200 (483)
....++.+.++. +.+....+...+.+.....++.++.+++.||+++|+++.++.++..+..++..+.+ +.. .+..
T Consensus 251 ~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~--~~~-~~~~ 327 (410)
T TIGR00885 251 CWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFAG--GHV-GLYC 327 (410)
T ss_pred HHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcC--ChH-HHHH
Confidence 334455554443 44445556667777788899999999999999999999888888888888777766 543 3566
Q ss_pred HHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhcc------CchHHHHHHHHHHHH
Q 011529 201 RVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF------GWPSVFYSFGSLGTV 272 (483)
Q Consensus 201 ~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~------g~~~~~~~~~~~~~~ 272 (483)
.++.|++.+..+|...+...+..+++.+....++.. ..+|..++|.+.|.+.|.. +.+..|++..+..+.
T Consensus 328 l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~--~~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~~~~ 403 (410)
T TIGR00885 328 LTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVM--AIIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLCFAV 403 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHH--HHhccchHHHHHHHHHHHhcccccCccchHHHHHHHHHHH
Confidence 778888889999999999999996555433333333 3399999999999999954 477777765444433
No 224
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.87 E-value=1.1e-11 Score=123.57 Aligned_cols=164 Identities=13% Similarity=0.046 Sum_probs=110.8
Q ss_pred hhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhh----hhhccc---
Q 011529 121 VNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTP----VAAKLG--- 193 (483)
Q Consensus 121 ~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~----~~~~~~--- 193 (483)
.......+.+.+..+.+.. -.......+...++.++...+.||+|||++++.+.++.+++.+.+. .....+
T Consensus 270 ~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (451)
T PF00083_consen 270 NFIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWW 347 (451)
T ss_pred ccccccccccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 3344456677777787776 2222234455556777778999999999999999888887776664 111110
Q ss_pred HHHHHHHHHHHhhhhh-cchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHHHHHHHHH
Q 011529 194 LPFLLVVRVFMGIGEG-VAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTV 272 (483)
Q Consensus 194 ~~~l~~~~~l~G~~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~ 272 (483)
-...++.-.+..++.+ ...+....+..|.+|.+.|+++.++......++..+++.+...+.+..+-...+.+.+.++++
T Consensus 348 ~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i 427 (451)
T PF00083_consen 348 SILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLI 427 (451)
T ss_pred ccccceeeeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhHHHHHH
Confidence 1112222222222222 344666788899999999999999999999999999999888888776634566666667777
Q ss_pred HHHHHHHhccCCCC
Q 011529 273 WFTVWLSKAHSSPA 286 (483)
Q Consensus 273 ~~~~~~~~~~~~~~ 286 (483)
..+..+++.||++.
T Consensus 428 ~~i~~~~~lpET~g 441 (451)
T PF00083_consen 428 AIIFVYFFLPETKG 441 (451)
T ss_pred HHhheeEEEeeCCC
Confidence 77777777777643
No 225
>PRK11462 putative transporter; Provisional
Probab=98.86 E-value=1.3e-07 Score=94.21 Aligned_cols=133 Identities=12% Similarity=0.059 Sum_probs=90.8
Q ss_pred hhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhcccHHHHHHHHHHHhh
Q 011529 127 ILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGI 206 (483)
Q Consensus 127 ~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~ 206 (483)
..++.+...-++...+.+...+.++.+++.+++++++||+|+|+.+..+..+.++..++..+.+..+.+.+++..++.|+
T Consensus 251 ~~y~~~y~~g~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 330 (460)
T PRK11462 251 MMYYVTWILGTPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGV 330 (460)
T ss_pred hhhhhhhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHH
Confidence 33333333334455667778888899999999999999999999877555544443333333332133344555566788
Q ss_pred hhhcchhHHHHHHhhhcC-------CcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCc
Q 011529 207 GEGVAMPAMNNILSKWVP-------VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGW 259 (483)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~-------~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~ 259 (483)
+.+...+...++++|..+ .++.|..++.......+|..+++.++|.+++..|+
T Consensus 331 ~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 331 LHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred HHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 777777777778887765 23335666778889999999999999988876555
No 226
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.84 E-value=2.1e-07 Score=90.98 Aligned_cols=132 Identities=14% Similarity=-0.002 Sum_probs=97.0
Q ss_pred hhh-hhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHH-HHHHHHHHHhhhhhcccHHHHHHHHHHH
Q 011529 127 ILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGV-VWWSIATALTPVAAKLGLPFLLVVRVFM 204 (483)
Q Consensus 127 ~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~l~ 204 (483)
.+. +.+.+|.++.+.+++.....++..++.++.+++.||++++....... ++..+...........+.+.+.+..++.
T Consensus 230 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (394)
T PRK11652 230 SGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALF 309 (394)
T ss_pred ChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHH
Confidence 344 44558999999999999999999999999999999998433222122 1121221222221111556677788899
Q ss_pred hhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCc
Q 011529 205 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGW 259 (483)
Q Consensus 205 G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~ 259 (483)
|++.+...+...++..+.+| ++++...++.+....+|..+++.+++.+.+...+
T Consensus 310 ~~g~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~ 363 (394)
T PRK11652 310 FFGAGMLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLPQTGQF 363 (394)
T ss_pred HHHHHHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHccCCchH
Confidence 99999999999999999885 6789999999999999999999999887765333
No 227
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.82 E-value=1.4e-07 Score=87.67 Aligned_cols=162 Identities=14% Similarity=0.185 Sum_probs=129.9
Q ss_pred HHHHHHHHHhhhhhhhHHhhhhhhhh-cCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHh
Q 011529 108 LCFSAFLLCNMDRVNMSIAILPMSAE-FNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALT 186 (483)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 186 (483)
.-.++.|+..........+++.+.++ .|.+..+.....+.+..+..++.++..++..|+...|.+.+..++..+.++..
T Consensus 240 ~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~ 319 (422)
T COG0738 240 LGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAV 319 (422)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 33444555555566666677776655 88899999999999999999999999999999999999998888888888887
Q ss_pred hhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHHH
Q 011529 187 PVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSF 266 (483)
Q Consensus 187 ~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~ 266 (483)
.+.+ +. .-+...++.|++.+..+|...+...+..| +.....|..-.+..+|+.+-|.+.|++.|+.|-...+...
T Consensus 320 ~l~~--g~-v~~~~l~~ig~F~simfPTIfslal~~l~--~~ts~~s~~l~maivGGAiiP~l~G~i~d~~g~~~~~~~~ 394 (422)
T COG0738 320 ALIG--GV-VALYALFLIGLFNSIMFPTIFSLALKNLG--EHTSVGSGLLVMAIVGGAIIPPLQGVIADMFGIQLTFLIV 394 (422)
T ss_pred HHhc--Ch-HHHHHHHHHHHHhHHHHHHHHHHHHhccC--ccccccceeeeeheecchHHHHHHHHHHHhhhhHHHHHHH
Confidence 8887 64 44556678899999999999999999997 4455666777788899999999999999999988777755
Q ss_pred HHHHHHHH
Q 011529 267 GSLGTVWF 274 (483)
Q Consensus 267 ~~~~~~~~ 274 (483)
..++.+..
T Consensus 395 pllc~lyV 402 (422)
T COG0738 395 PLLCYLYV 402 (422)
T ss_pred HHHHHHHH
Confidence 55555444
No 228
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.81 E-value=2.9e-07 Score=86.27 Aligned_cols=160 Identities=29% Similarity=0.530 Sum_probs=125.7
Q ss_pred HHHHhhhhhhhHHhhhhhhhhcCCCh--hhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhh
Q 011529 113 FLLCNMDRVNMSIAILPMSAEFNWNP--ATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAA 190 (483)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~g~s~--~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~ 190 (483)
.+....+........+.+..+++.+. ...++..+.+.+...++.++.|.+.||+|||+.+..+.....++.+...+..
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~ 90 (338)
T COG0477 11 ALLLGLDLGLLSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAP 90 (338)
T ss_pred HHHHHHhcchHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCc
Confidence 33334556666677777777777666 5889999999999999999999999999999888888766555555555555
Q ss_pred cccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCC-cchhHHHHHHHH-HHHhHHHHHHhhHHHhhhc--cCchHHHHHH
Q 011529 191 KLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPV-AERSRSLALVYS-GMYLGSVTGLAFSPFLIHR--FGWPSVFYSF 266 (483)
Q Consensus 191 ~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~~~-~~~~g~~~g~~~~~~l~~~--~g~~~~~~~~ 266 (483)
..+.+.+++.|++.|++.+...+...+++.+++|+ ++|+...+.... ...+|..++|.+++.+... .+|+..+...
T Consensus 91 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (338)
T COG0477 91 NVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLA 170 (338)
T ss_pred cchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHH
Confidence 11378899999999999999999999999999977 688999999888 6888999999887777654 5788866665
Q ss_pred HHHHHH
Q 011529 267 GSLGTV 272 (483)
Q Consensus 267 ~~~~~~ 272 (483)
......
T Consensus 171 ~~~~~~ 176 (338)
T COG0477 171 ALLGLL 176 (338)
T ss_pred HHHHHH
Confidence 555443
No 229
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.80 E-value=7.3e-08 Score=96.02 Aligned_cols=128 Identities=15% Similarity=0.162 Sum_probs=110.6
Q ss_pred hhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhh-c-------ccHHHHHHHHH
Q 011529 131 SAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAA-K-------LGLPFLLVVRV 202 (483)
Q Consensus 131 ~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~-~-------~~~~~l~~~~~ 202 (483)
.+.+|.++.++|++.....++.+++....+++.+|++.|+++.++.++.+++.+...... . .+.+.++...+
T Consensus 280 ~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~ 359 (468)
T TIGR00788 280 TQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSI 359 (468)
T ss_pred cccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhH
Confidence 357899999999999999999999999999999999999999999999988775543111 0 03345566678
Q ss_pred HHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccC
Q 011529 203 FMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG 258 (483)
Q Consensus 203 l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g 258 (483)
+.+++.+....+...++.+..|++.+++.+++.+...++|..+++.+++.+.++.|
T Consensus 360 l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 360 IAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred HHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 88888888888999999999999999999999999999999999999999998877
No 230
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.77 E-value=1.8e-06 Score=83.43 Aligned_cols=295 Identities=14% Similarity=0.051 Sum_probs=170.5
Q ss_pred HHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcC
Q 011529 145 QSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVP 224 (483)
Q Consensus 145 ~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~ 224 (483)
.++......+.+++.+.+.|+.|.|+.++++..+.....+.+.+. |-+.+++...+.|+|.+..+...-.++++...
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~---N~y~~yfssallG~Gaallw~GqG~ylt~~st 132 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFP---NSYYLYFSSALLGFGAALLWTGQGGYLTSNST 132 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhc---chHHHHHHHHHhhhhHHheecccceehhhcCC
Confidence 677788888999999999999999999999999998887776555 56788999999999999999999999999999
Q ss_pred CcchhHHHHHHHHHHHhHHHHHHhhHHHhhhcc--------Cch-H----------HHHHHHHHHHHHHHHHHHhccCCC
Q 011529 225 VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF--------GWP-S----------VFYSFGSLGTVWFTVWLSKAHSSP 285 (483)
Q Consensus 225 ~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~--------g~~-~----------~~~~~~~~~~~~~~~~~~~~~~~~ 285 (483)
++.+.+..++.......+.++|..+...+...- +.+ . ...+.+++..+..+........+.
T Consensus 133 ~~tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~~~p~ 212 (461)
T KOG3098|consen 133 RETIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFDFLPS 212 (461)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhheeecCc
Confidence 999999999999999999888876654332211 110 0 111111111111111111111111
Q ss_pred CCC---CCCC-hhhHHHhhhcccCCCCCcccchhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHHHHHH--hCCCc-ch
Q 011529 286 AED---PQLR-PAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQV--LHFNL-TE 358 (483)
Q Consensus 286 ~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~-~~ 358 (483)
+.. .+.. ....+. ....-+++++++...+....+.............|..+.-. .+.+. ..
T Consensus 213 ~~~~~~~~~~~~~~~~~------------l~~~~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~ 280 (461)
T KOG3098|consen 213 KDVVNCKSSSETSFSEL------------LKLTFKLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTYL 280 (461)
T ss_pred cchhhhhhhccccHHHH------------HHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcchhH
Confidence 000 0000 000000 01122456777777666665555555555555555554432 22222 22
Q ss_pred hhHHhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhcc----------------chhHHH
Q 011529 359 SGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHV----------------DSPAMA 422 (483)
Q Consensus 359 ~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~ 422 (483)
.++.....+++.+++....+.+.+|.++.+....-. +...+......+.....+ +.....
T Consensus 281 ~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~----~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~ 356 (461)
T KOG3098|consen 281 IAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVL----IGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLA 356 (461)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchh----HHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHH
Confidence 344444556777777778888887765554322111 111111111111111111 122344
Q ss_pred HHHHHHhhhhhhhhhchhhhhHhhhccCcceeeeee
Q 011529 423 VLCMACSQGTDAFSQSGLYSNHQDIAPRYSVSIISI 458 (483)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 458 (483)
.++..+.+..-.......+.......|+.+..++++
T Consensus 357 ~ii~~l~G~~D~~~~t~~~~ii~~~~~~~~~~~fsi 392 (461)
T KOG3098|consen 357 LIIGFLLGFGDACFNTQRYVIIALLYPDDRAQAFSL 392 (461)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHhcCchHHHHHH
Confidence 444445555555566667777777777777666543
No 231
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.74 E-value=2.8e-06 Score=80.75 Aligned_cols=135 Identities=13% Similarity=0.096 Sum_probs=102.3
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHh
Q 011529 141 VGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILS 220 (483)
Q Consensus 141 ~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~ 220 (483)
.+.+.-+-.+...+..+.+.++.+|+..+.-+....++..++.++.++++ +.+.-+++-++.+++.|..-.....+..
T Consensus 61 t~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~--~v~~~l~Gv~las~ssg~GE~tfL~lt~ 138 (402)
T PF02487_consen 61 TGAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSP--SVWVRLLGVVLASLSSGLGEVTFLSLTH 138 (402)
T ss_pred chHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeecc--chhHHHHHHHHHhhhhhhhHHHHHHHHH
Confidence 34566667778888889999999999877777778888889999999988 8888899999999998887777777644
Q ss_pred hhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCc--hHHHHHHHHHHHHHHHHHHHhccC
Q 011529 221 KWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGW--PSVFYSFGSLGTVWFTVWLSKAHS 283 (483)
Q Consensus 221 ~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~ 283 (483)
.+++ ...+-+..+.+.++++|+..-..+.+ .++ |..+.+...+.++..+..++..+.
T Consensus 139 -~y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L~~ 197 (402)
T PF02487_consen 139 -FYGK----SSLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLLPS 197 (402)
T ss_pred -hcCc----cccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 5543 35788888888899999887766665 554 667777776666555554444443
No 232
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.73 E-value=3.6e-08 Score=91.03 Aligned_cols=164 Identities=18% Similarity=0.138 Sum_probs=128.1
Q ss_pred HHhhhhhhhHHhhhh-hhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcC--CchHHHHHHHHHHHHHHHhhhhhc
Q 011529 115 LCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVG--GKAVLGFGVVWWSIATALTPVAAK 191 (483)
Q Consensus 115 ~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g--~r~~~~~~~~~~~~~~~~~~~~~~ 191 (483)
.........-|.++. +.+.+..+..++|....-..+.+.++..+.|.++||++ |-.....+.+..++.+....+++
T Consensus 281 ~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~- 359 (464)
T KOG3764|consen 281 FSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFAT- 359 (464)
T ss_pred hccchHHHhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhh-
Confidence 344455556677777 56667766669999999999999999999999999999 43334455666666666677888
Q ss_pred ccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCc------chhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHH
Q 011529 192 LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVA------ERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYS 265 (483)
Q Consensus 192 ~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~------~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~ 265 (483)
++..+++-++..+++.+..............+.+ ..|...++...+..+|..+||.++|.+.+..|++|...+
T Consensus 360 -~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl~~i 438 (464)
T KOG3764|consen 360 -SIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTI 438 (464)
T ss_pred -hHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehhHHHHHHH
Confidence 8888888888888888777776666665555432 457899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh
Q 011529 266 FGSLGTVWFTVWLSK 280 (483)
Q Consensus 266 ~~~~~~~~~~~~~~~ 280 (483)
.++..++-.-+....
T Consensus 439 ig~~n~iyapvl~ll 453 (464)
T KOG3764|consen 439 IGILNLIYAPVLLLL 453 (464)
T ss_pred HHHHHHHHHHHHHHH
Confidence 888887765555443
No 233
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.73 E-value=6.6e-08 Score=93.53 Aligned_cols=119 Identities=18% Similarity=0.103 Sum_probs=88.0
Q ss_pred hHHhhhh-hhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhcc--cHHHHHH
Q 011529 123 MSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKL--GLPFLLV 199 (483)
Q Consensus 123 ~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~ 199 (483)
.....|. +.+.+|.++.+.+++.++..+...++.+++|++.||+|+|+.+..+......+..+..+.... +.+..++
T Consensus 244 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (366)
T TIGR00886 244 VSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLVSPLSLAVFIV 323 (366)
T ss_pred HHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCCCcchHHHHHH
Confidence 3444555 556789999999999999999999999999999999999988777776666655554433211 3444445
Q ss_pred HHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhH
Q 011529 200 VRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLG 242 (483)
Q Consensus 200 ~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 242 (483)
...+.+++.+...+...+.+.+..| +++++++|+.+...++|
T Consensus 324 ~~~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 324 LFVALFFFSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred HHHHHHHHhccccchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 5555555556666667778888885 79999999999888776
No 234
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.69 E-value=1.6e-06 Score=81.54 Aligned_cols=151 Identities=13% Similarity=0.070 Sum_probs=122.7
Q ss_pred hhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHh-hcCCchHHHHHHHHHHHHHHHhhhhh-cccHHHHHHHHHHHh
Q 011529 128 LPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWAD-TVGGKAVLGFGVVWWSIATALTPVAA-KLGLPFLLVVRVFMG 205 (483)
Q Consensus 128 ~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d-r~g~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~l~G 205 (483)
|+=.+.||++..+..-+......+..++....|++.. |.++++...+++....++..+..++. ..+.+.+....++.|
T Consensus 233 Pygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G 312 (403)
T PF03209_consen 233 PYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLG 312 (403)
T ss_pred CchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHH
Confidence 3345678999999999999999999999999999988 67788888888888777766654432 126788999999999
Q ss_pred hhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhc----------cCchHHHHHHHHHHHHHHH
Q 011529 206 IGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR----------FGWPSVFYSFGSLGTVWFT 275 (483)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~----------~g~~~~~~~~~~~~~~~~~ 275 (483)
++.|.......+...++..+++.|..+|.+.....++..+|..++|.+.|. .+|...|.+-++..+++.+
T Consensus 313 ~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ 392 (403)
T PF03209_consen 313 LGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALV 392 (403)
T ss_pred HhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999988762 2355566666666655554
Q ss_pred HHH
Q 011529 276 VWL 278 (483)
Q Consensus 276 ~~~ 278 (483)
+..
T Consensus 393 ll~ 395 (403)
T PF03209_consen 393 LLG 395 (403)
T ss_pred HHH
Confidence 443
No 235
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=98.67 E-value=5.9e-05 Score=74.44 Aligned_cols=282 Identities=9% Similarity=0.009 Sum_probs=161.9
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHH-HHHHHHhhHHHHHhhcCCchHHHHHHHHH
Q 011529 101 KRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFW-GYLLTQIAGGIWADTVGGKAVLGFGVVWW 179 (483)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~-~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 179 (483)
..+..+..+.+..++..+..+..-..-..+.-. ..++..+.++=....+ ...+...+..++++++++.+++-+....+
T Consensus 21 ~E~~k~~~l~~m~f~i~f~y~~lR~~KD~lvvt-~~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F 99 (491)
T PF03219_consen 21 SELKKFLPLALMFFFILFNYTILRDLKDTLVVT-AQGAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPF 99 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEe-cCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 334455555555665555544443332221111 1255666666554444 44566788999999999999877666555
Q ss_pred HHHHHHhhhh--hc-----c----------------------cHHHHHHHHHHHhhhhhcchh-HHHHHHhhhcCCcchh
Q 011529 180 SIATALTPVA--AK-----L----------------------GLPFLLVVRVFMGIGEGVAMP-AMNNILSKWVPVAERS 229 (483)
Q Consensus 180 ~~~~~~~~~~--~~-----~----------------------~~~~l~~~~~l~G~~~~~~~~-~~~~~~~~~~~~~~r~ 229 (483)
.....++++. |. . +.|...+..++.-+-.....+ ..+.+..|.++.+|-.
T Consensus 100 ~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAK 179 (491)
T PF03219_consen 100 LGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAK 179 (491)
T ss_pred HHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHH
Confidence 5555444332 10 0 012233333333333233333 4688999999999999
Q ss_pred HHHHHHHHHHHhHHHHHHhhHHHhhh---------ccCchHHHHHHH----HHHHHHHHHHHHhccCCCCCCCCCChhhH
Q 011529 230 RSLALVYSGMYLGSVTGLAFSPFLIH---------RFGWPSVFYSFG----SLGTVWFTVWLSKAHSSPAEDPQLRPAEK 296 (483)
Q Consensus 230 ~~~~~~~~~~~~g~~~g~~~~~~l~~---------~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (483)
+..++...+.++|.+++..+...+.+ .-.|...+.... +.+++.........+....++... +
T Consensus 180 RfYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~v~~~g~~i~~~~~~~~~~vl~~~~~~----~ 255 (491)
T PF03219_consen 180 RFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAGVDAWELSLNSLMGIVLILGIVIILLYRYMNKNVLTDPRFY----P 255 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccccc----h
Confidence 99999999999999999988888877 123543322211 111222222222221111111100 0
Q ss_pred HHhhhcccCCCCCcccchhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcch----hhHHhHHHHHHHHH
Q 011529 297 KLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTE----SGLFCVLPWLTMAF 372 (483)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~----~~~~~~~~~~~~~i 372 (483)
....+++++.+..-..+++.++|+|-+..+.+...++....+.+....-..+++.+. ++.+ .|-.....++..++
T Consensus 256 ~~~~~kk~k~k~s~~es~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~-~~~~ysafmG~~~~~tGivtii 334 (491)
T PF03219_consen 256 SAKKKKKKKPKMSLKESFKLLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYP-DPNDYSAFMGKFSSWTGIVTII 334 (491)
T ss_pred hhhcccccCCCccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CchHHHHHHHHHHHHHHHHHHH
Confidence 000001111112223456778899999999998888888888888777777777443 3333 24445556677777
Q ss_pred HHHHHHHHHHHHhhcC
Q 011529 373 SANLGGWIADTLVSKG 388 (483)
Q Consensus 373 ~~~~~g~l~dr~g~~~ 388 (483)
..++++.+.+|+|.+.
T Consensus 335 ~~~l~~~iir~~GW~~ 350 (491)
T PF03219_consen 335 MMFLSSNIIRRFGWRT 350 (491)
T ss_pred HHHHHHHHHHHhhHHH
Confidence 7788899999988763
No 236
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.65 E-value=1.3e-06 Score=85.95 Aligned_cols=157 Identities=9% Similarity=0.005 Sum_probs=101.5
Q ss_pred hhhhhhhHHhhhh-hhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhh----hhc
Q 011529 117 NMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPV----AAK 191 (483)
Q Consensus 117 ~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~----~~~ 191 (483)
......+....|. +.+.+|.++.+.++.......+..++..+.+++.+|..+++.+.....+..++.++... .+
T Consensus 231 ~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~~- 309 (413)
T PRK15403 231 YIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLLWP- 309 (413)
T ss_pred HHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHcc-
Confidence 3333444455676 45556999999999988888888888888888775554444433222222233222221 12
Q ss_pred ccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHHHHHHHH
Q 011529 192 LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGT 271 (483)
Q Consensus 192 ~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~ 271 (483)
.+++..++..++.++|.+...+......-.. ....+|++.++.+.....+..+++..++++.++ +-...|...+++..
T Consensus 310 ~~~~~~~~~~~l~~~G~~~~~p~~~~~al~~-~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~ 387 (413)
T PRK15403 310 HVWLWSVLGTSLYAFGIGLIFPTLFRFTLFS-NNLPKGTVSASLNMVILMVMAVSVEIGRWLWFN-GGRLPFHLLAVVAG 387 (413)
T ss_pred ccHHHHHHHHHHHHHHHHHHhHHHHHHHhcc-CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCchHHHHHHHHHH
Confidence 1444456778888888888877776533211 233579999999999999999999999988765 55666666655555
Q ss_pred HHHHH
Q 011529 272 VWFTV 276 (483)
Q Consensus 272 ~~~~~ 276 (483)
+....
T Consensus 388 ~~~~~ 392 (413)
T PRK15403 388 VIVVF 392 (413)
T ss_pred HHHHH
Confidence 44433
No 237
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.64 E-value=7.9e-07 Score=89.45 Aligned_cols=139 Identities=14% Similarity=0.060 Sum_probs=102.7
Q ss_pred HHHHHHHHHHHHHHHHhhH----HHHHhhcCCchHHHHHHHHHHHHHHHhhhhhc-------ccHHHHHHHHHHHhhhhh
Q 011529 141 VGLIQSSFFWGYLLTQIAG----GIWADTVGGKAVLGFGVVWWSIATALTPVAAK-------LGLPFLLVVRVFMGIGEG 209 (483)
Q Consensus 141 ~g~~~~~~~~~~~~~~~~~----g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~-------~~~~~l~~~~~l~G~~~~ 209 (483)
.+++.++..+...+..++. +++.||++..+.+.++.++.+++.+...+... .+.++++...++.|+|..
T Consensus 318 ~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~ 397 (500)
T PRK09584 318 PEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGEL 397 (500)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHH
Confidence 5666667776666666666 55555666667788999999999888766542 135688899999999999
Q ss_pred cchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhh----------ccCchHHHHHHHHHHHHHHHHHHH
Q 011529 210 VAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH----------RFGWPSVFYSFGSLGTVWFTVWLS 279 (483)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~----------~~g~~~~~~~~~~~~~~~~~~~~~ 279 (483)
...|...+++.+..|++.||+.+|.+.....+|..++..+.+.... ..++.+.|...++..++..++.+.
T Consensus 398 ~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~ 477 (500)
T PRK09584 398 MISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLL 477 (500)
T ss_pred HHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999888888887777666643211 113567777777666554444433
No 238
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=98.60 E-value=2e-06 Score=78.09 Aligned_cols=319 Identities=11% Similarity=0.046 Sum_probs=189.9
Q ss_pred hhcCCChhhHH-HHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhcccHHHHHHHHHHHhhhhhc
Q 011529 132 AEFNWNPATVG-LIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGV 210 (483)
Q Consensus 132 ~~~g~s~~~~g-~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~ 210 (483)
.+.+++..++. -+.-+..-.+.+.-++.=.+.|-...|++++.-.+.......++.+.+ +.+.+=+.-++.|...+
T Consensus 34 p~~NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~--sV~~mQvlE~FyG~~tA- 110 (433)
T KOG3810|consen 34 PDKNLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGP--SVKAMQVLEFFYGPATA- 110 (433)
T ss_pred CCCCccHHHHhcccccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcC--CchheeeehhhcChHHH-
Confidence 44566666543 111112222333344444688999999998887777777777777888 88888888888988755
Q ss_pred chhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccC--chHHHHHHHHHHHHHHHHHHHhccCCCCCC
Q 011529 211 AMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG--WPSVFYSFGSLGTVWFTVWLSKAHSSPAED 288 (483)
Q Consensus 211 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (483)
...+.++++-...+++++.++.|...+..-.|-.+|..++-.++.... +...=.+......++.++.++ .|..++..
T Consensus 111 aEIAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~f-LP~v~rSl 189 (433)
T KOG3810|consen 111 AEIAYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALF-LPRVKRSL 189 (433)
T ss_pred HHHhhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhh-CCCCchhh
Confidence 457788899999999999999999999999999999999888876433 333222222222233333333 33332211
Q ss_pred CCCChhhHHHhh--hcccCCCCC----------cccchhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHh-CCC
Q 011529 289 PQLRPAEKKLIV--SSCASKEPV----------KTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVL-HFN 355 (483)
Q Consensus 289 ~~~~~~~~~~~~--~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~ 355 (483)
-..+.+++.... ++...+.+. -..+++...+||.+....+.+.+...+++.+..+.....++.- .-.
T Consensus 190 ~f~~~~~~~~v~~~e~~~~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~~~~~ 269 (433)
T KOG3810|consen 190 YFHRLEDKISVGDLEEMNPQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQILWKEVAPNPA 269 (433)
T ss_pred hhhcccccceeccchhcCccchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHHHHHHhhCCCch
Confidence 000000000000 000000000 0123455678899888888888888888888888877777642 111
Q ss_pred cchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHhhhhhhh
Q 011529 356 LTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAF 435 (483)
Q Consensus 356 ~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (483)
....|..-++..+.++++.+..|.+--++.|. ...++.++.+.-+..+..+....+.|+..+...+......+
T Consensus 270 ~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~-------g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l 342 (433)
T KOG3810|consen 270 NVYNGAVEAVSTLLGAIAALAAGYLNINWNRW-------GDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQL 342 (433)
T ss_pred hhhcCHHHHHHHHHHHHHHHHHHheeeccchh-------hHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhh
Confidence 22235566666777788888888876555444 23344444444444444445555555555555554444444
Q ss_pred hhch-hhhhHhhhccCcceeeeeeeec
Q 011529 436 SQSG-LYSNHQDIAPRYSVSIISINIL 461 (483)
Q Consensus 436 ~~~~-~~~~~~~~~~~~~g~~~g~~~~ 461 (483)
..+. ......+...+.-|..+|+|..
T Consensus 343 ~itiA~~~iA~nL~~e~~gLvFGiNTF 369 (433)
T KOG3810|consen 343 TITIATFQIARNLSSELFGLVFGINTF 369 (433)
T ss_pred hhhHHHHHHHHhhhhhhheeeeehHHH
Confidence 4433 3344445667788999997754
No 239
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.59 E-value=2.8e-08 Score=93.42 Aligned_cols=178 Identities=10% Similarity=-0.029 Sum_probs=125.7
Q ss_pred HHHHHHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHH--------HHHHHHH-HHHHHHhhHHHHHhhcCCchHHHH
Q 011529 104 FIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGL--------IQSSFFW-GYLLTQIAGGIWADTVGGKAVLGF 174 (483)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~--------~~~~~~~-~~~~~~~~~g~l~dr~g~r~~~~~ 174 (483)
+.+...+...|+.-...+..+.....+.+..|+.+.+... ...+... +.+.+-.+...++|++|||++.+.
T Consensus 304 ~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~ 383 (538)
T KOG0252|consen 304 KHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLM 383 (538)
T ss_pred HHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHh
Confidence 4555666666666666666677777788877765544332 2222222 222356677888999999999999
Q ss_pred HHHHHHHHHHHhhhhhcc--cHHHHHHHHHHHhhh-hhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHH
Q 011529 175 GVVWWSIATALTPVAAKL--GLPFLLVVRVFMGIG-EGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSP 251 (483)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~--~~~~l~~~~~l~G~~-~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 251 (483)
+.+++.+..+..+...+. +...++++..+..+. .-+.......+-+|.+|.+-|+...|+..+.+-+|.++|...-.
T Consensus 384 GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~ 463 (538)
T KOG0252|consen 384 GFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFL 463 (538)
T ss_pred hHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhh
Confidence 999999998888776621 122233333333322 12233444556789999999999999999999999999999999
Q ss_pred Hhhh-----ccCchHHHHHHHHHHHHHHHHHHHhc
Q 011529 252 FLIH-----RFGWPSVFYSFGSLGTVWFTVWLSKA 281 (483)
Q Consensus 252 ~l~~-----~~g~~~~~~~~~~~~~~~~~~~~~~~ 281 (483)
++.+ ..+.++.+++.+.+.++..+..++++
T Consensus 464 ~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~p 498 (538)
T KOG0252|consen 464 YLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLIP 498 (538)
T ss_pred HhhhccCCccccchHHHHHHHHHHHHhHheeEEee
Confidence 9988 67889999999988888777666655
No 240
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.59 E-value=2.1e-06 Score=84.57 Aligned_cols=181 Identities=13% Similarity=-0.037 Sum_probs=130.4
Q ss_pred HHHHHHHHHHHHhhhhhhhHHhhhh-hhh-hcCCChh------h----HHHHHHHHHHHHHHHHhhHHHHHhhcCC-chH
Q 011529 105 IVVLCFSAFLLCNMDRVNMSIAILP-MSA-EFNWNPA------T----VGLIQSSFFWGYLLTQIAGGIWADTVGG-KAV 171 (483)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~g~s~~------~----~g~~~~~~~~~~~~~~~~~g~l~dr~g~-r~~ 171 (483)
.+..+++..++.++....+..+... +.+ .++.++. + -.+....+.+...+.+++..++.+|+|+ |++
T Consensus 259 ~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~ 338 (477)
T TIGR01301 259 PVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGKRL 338 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhH
Confidence 4445566666666666555555444 332 2433211 1 1244455566666777888899999985 677
Q ss_pred HHHHHHHHHHHHHHhhhhhcc--c-----------------HHHHHHHHHHHhhhhhcchhHHHHHHhhhcCC--cchhH
Q 011529 172 LGFGVVWWSIATALTPVAAKL--G-----------------LPFLLVVRVFMGIGEGVAMPAMNNILSKWVPV--AERSR 230 (483)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~--~-----------------~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~--~~r~~ 230 (483)
..++.++.+++.+...+.+.. + .+..++...+.|+..+..+..-++++++..++ ++.|.
T Consensus 339 ~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~ 418 (477)
T TIGR01301 339 WGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLGAGQGL 418 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCcc
Confidence 788888888887777654410 0 36777888899999999999999999999984 55699
Q ss_pred HHHHHHHHHHhHHHHHHhhHHHhhhccC--chHHHHHHHHHHHHHHHHHHHhccCCC
Q 011529 231 SLALVYSGMYLGSVTGLAFSPFLIHRFG--WPSVFYSFGSLGTVWFTVWLSKAHSSP 285 (483)
Q Consensus 231 ~~~~~~~~~~~g~~~g~~~~~~l~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (483)
.+|+.+.+..+.+++..+..|.+.+.+| -.+++.+.++..+++.+..++..|+++
T Consensus 419 ~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~~~ 475 (477)
T TIGR01301 419 SMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPRPR 475 (477)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 9999999999999999988888666555 456788888888888888887777654
No 241
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.57 E-value=1.8e-06 Score=86.50 Aligned_cols=139 Identities=14% Similarity=0.050 Sum_probs=104.7
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHhhcCCchH-------HHHHHHHHHHHHHHhh-----hh---hcccHHHHHHHHHHHh
Q 011529 141 VGLIQSSFFWGYLLTQIAGGIWADTVGGKAV-------LGFGVVWWSIATALTP-----VA---AKLGLPFLLVVRVFMG 205 (483)
Q Consensus 141 ~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~-------~~~~~~~~~~~~~~~~-----~~---~~~~~~~l~~~~~l~G 205 (483)
.+++.+...+...+..++.+++.||+++|+. +.+|.++.+++.+..+ +. ...+.++++...++.|
T Consensus 311 ~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g 390 (489)
T PRK10207 311 PVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQS 390 (489)
T ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHH
Confidence 3556666667787889999999999999873 6677777766654321 11 1125788888899999
Q ss_pred hhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhh----------ccCchHHHHHHHHHHHHHHH
Q 011529 206 IGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH----------RFGWPSVFYSFGSLGTVWFT 275 (483)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~----------~~g~~~~~~~~~~~~~~~~~ 275 (483)
+|.+...+...+++.+..|++.++.++|++.....+|..+|..++..... .-.+.+.|...++..+++.+
T Consensus 391 ~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v 470 (489)
T PRK10207 391 LGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAV 470 (489)
T ss_pred HHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999888865521 00245666666666665555
Q ss_pred HHHH
Q 011529 276 VWLS 279 (483)
Q Consensus 276 ~~~~ 279 (483)
+.+.
T Consensus 471 ~~~~ 474 (489)
T PRK10207 471 VMAL 474 (489)
T ss_pred HHHH
Confidence 5444
No 242
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.55 E-value=1.5e-06 Score=87.93 Aligned_cols=180 Identities=16% Similarity=0.097 Sum_probs=119.7
Q ss_pred HHHHHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHH
Q 011529 105 IVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATA 184 (483)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 184 (483)
.+..+.+..+.+..+......+.+.+.+..|.+... .+...+..+...++..+...+.||+|||+.++.+...+.++.+
T Consensus 296 ~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~ 374 (513)
T KOG0254|consen 296 LIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLV 374 (513)
T ss_pred HHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHH
Confidence 344455555555555566666777788888876543 5555566667777778889999999999999999999999988
Q ss_pred Hhhhhhcc-----------cHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHh
Q 011529 185 LTPVAAKL-----------GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFL 253 (483)
Q Consensus 185 ~~~~~~~~-----------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 253 (483)
+++..... .+..+....+.......+..+....+.+|.+|.+-|+++.++......+...+-......+
T Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~ 454 (513)
T KOG0254|consen 375 ILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFI 454 (513)
T ss_pred HHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 77643210 1122233333333333445566678899999999999999998887777766655444444
Q ss_pred hhccCchHHHHHHHHHHHHHHH-HHHHhccCCC
Q 011529 254 IHRFGWPSVFYSFGSLGTVWFT-VWLSKAHSSP 285 (483)
Q Consensus 254 ~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 285 (483)
.+..++...|...+..+.+... ..+...||++
T Consensus 455 ~~~~~~~~~f~~f~~~~~~~~~~fv~~~~pETk 487 (513)
T KOG0254|consen 455 TEALGIGGTFGYFGGICLLSLIIFVFFFVPETK 487 (513)
T ss_pred HHhccccchHHHHHHHHHHHHHHHheEEcccCC
Confidence 4444445566666666666655 5566666653
No 243
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.48 E-value=1.4e-06 Score=62.36 Aligned_cols=70 Identities=13% Similarity=0.156 Sum_probs=60.7
Q ss_pred HHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHH
Q 011529 110 FSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWW 179 (483)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 179 (483)
-..+++.+...+.+.|.+|.+.++.|+|+.++|++.++..+...++.+++|.++||+++++.++....++
T Consensus 6 k~~yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 6 KAFYFFYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 3456666777788889999999999999999999999999999999999999999999998877665543
No 244
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.45 E-value=1.4e-06 Score=62.72 Aligned_cols=79 Identities=15% Similarity=0.220 Sum_probs=72.6
Q ss_pred HhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhcccHH
Q 011529 116 CNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLP 195 (483)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (483)
.++.+..+.+.+|.+.++.++|..+.|++.+...+++.++.+...++.++..+++.+..+.+...+..+.+++.+ +.+
T Consensus 4 mGigRFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~--~~~ 81 (85)
T PF06779_consen 4 MGIGRFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTH--SFW 81 (85)
T ss_pred hhhHHHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHh--chH
Confidence 456788899999999999999999999999999999999999999999998889999999999999999999888 654
Q ss_pred H
Q 011529 196 F 196 (483)
Q Consensus 196 ~ 196 (483)
.
T Consensus 82 ~ 82 (85)
T PF06779_consen 82 L 82 (85)
T ss_pred H
Confidence 4
No 245
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.44 E-value=1.4e-06 Score=86.03 Aligned_cols=161 Identities=15% Similarity=0.145 Sum_probs=105.0
Q ss_pred HHHHHHHHHHHHhhhhhhhHHhhhhhhhh-cCCChhhHHHHHHHHHHHHHHHHhhHHHHHhh----cCCchHHHHHHHHH
Q 011529 105 IVVLCFSAFLLCNMDRVNMSIAILPMSAE-FNWNPATVGLIQSSFFWGYLLTQIAGGIWADT----VGGKAVLGFGVVWW 179 (483)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr----~g~r~~~~~~~~~~ 179 (483)
.++..++..++.....+.+..++|.+.++ .|.|..+.+.+...+.++.+++.+++|.++|| ..+|........+.
T Consensus 274 ~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~ 353 (495)
T KOG2533|consen 274 GVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLY 353 (495)
T ss_pred hHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 34556667777777788888889997777 66999999999999999999999999999999 56666655555444
Q ss_pred HHHH-HHhhhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcch-hHHHHHHHHHHHh-HHHHHHhhHHHhhhc
Q 011529 180 SIAT-ALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAER-SRSLALVYSGMYL-GSVTGLAFSPFLIHR 256 (483)
Q Consensus 180 ~~~~-~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r-~~~~~~~~~~~~~-g~~~g~~~~~~l~~~ 256 (483)
.+.. +.+.... +........+....+.....+.......+...++.| -...+....+.+. |.+.++...+.....
T Consensus 354 ~~~g~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~ap~ 431 (495)
T KOG2533|consen 354 AIIGAISLLAAA--VLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSLDAPR 431 (495)
T ss_pred HHHHHHHHHhhc--cchHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhcccccCcc
Confidence 4333 4433333 344444444444455556667777888777755443 3333334444444 444444454555556
Q ss_pred cCchHHHHHHH
Q 011529 257 FGWPSVFYSFG 267 (483)
Q Consensus 257 ~g~~~~~~~~~ 267 (483)
++|...|....
T Consensus 432 y~~~~~f~~~~ 442 (495)
T KOG2533|consen 432 YGWGAVFYMLV 442 (495)
T ss_pred hhhhhHHHHHH
Confidence 78888874433
No 246
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.43 E-value=1.2e-06 Score=84.36 Aligned_cols=132 Identities=12% Similarity=0.048 Sum_probs=99.6
Q ss_pred hhhcChhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHH
Q 011529 316 LILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVR 395 (483)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~~~~~~~~ 395 (483)
.++.++....+++...+..++...+.+++--++++ .+..+...|...+..-.+.++.-++.+++.+|+|+.+.+.
T Consensus 366 ~~~~s~~~llff~~av~mG~g~~lv~tFLfWHled-~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~---- 440 (618)
T KOG3762|consen 366 KVFASPHILLFFFVAVVMGAGVGLVFTFLFWHLED-LGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMY---- 440 (618)
T ss_pred HHhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhh-cCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceee----
Confidence 35667777777777778888888888888778888 6777888888888888899999999999999999886433
Q ss_pred HHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHhhhhhhhhhchhhhhHhhhccC-cceeeee
Q 011529 396 KIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPR-YSVSIIS 457 (483)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g 457 (483)
+++.+...-++......++|..+.+-.+-+...........+++..+.|+ .+.++.+
T Consensus 441 -----lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~ 498 (618)
T KOG3762|consen 441 -----LGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQG 498 (618)
T ss_pred -----ehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHH
Confidence 44444445555555667788888777777777777788888888887654 4555554
No 247
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=98.42 E-value=3.9e-05 Score=73.67 Aligned_cols=271 Identities=10% Similarity=-0.003 Sum_probs=151.6
Q ss_pred HHHHHHHHHHhhhhhhhHHhhhhhhhh--cCCChhhHHHHHHHHHHHHHHHHhhHHHHHh-----hcCCchHHHHH-HHH
Q 011529 107 VLCFSAFLLCNMDRVNMSIAILPMSAE--FNWNPATVGLIQSSFFWGYLLTQIAGGIWAD-----TVGGKAVLGFG-VVW 178 (483)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d-----r~g~r~~~~~~-~~~ 178 (483)
.++.+.+++++.-.+...-.+|.+.++ .+.|.+|.|....+ ...+. .-++|.++.| |+||||..++- -.+
T Consensus 3 ~lL~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q~~~fSla-~~PfS-lKlLWaPiVDs~y~~~~GRRKSWiiP~Q~l 80 (544)
T PF13000_consen 3 ALLVLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQQAIFSLA-SYPFS-LKLLWAPIVDSVYSKRIGRRKSWIIPIQYL 80 (544)
T ss_pred eHHHHHHHHcCcccccccccchhhhccccCCCChhHheeeeee-echhH-HHHhhhhhhhhhcccccCCcchhhhHHHHH
Confidence 456677888888877765678888888 78888888764332 22222 3567777777 78999874432 222
Q ss_pred HHHHHHHhhhhh---------------c-------ccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHH
Q 011529 179 WSIATALTPVAA---------------K-------LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVY 236 (483)
Q Consensus 179 ~~~~~~~~~~~~---------------~-------~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 236 (483)
.++.++.++... . .+...+....++.-+..+....+...+.-.+..+++++.+..-..
T Consensus 81 ~g~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ASTcqt 160 (544)
T PF13000_consen 81 SGILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGYASTCQT 160 (544)
T ss_pred HHHHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcchHHHHHH
Confidence 222222222111 0 011122333333444445666777778778888888887777777
Q ss_pred HHHHhHHHHHHhhHHHhhhc-------------cC---chHHHHHHHHHHHHHHHHHHHhccCCCCCCCCC--Ch---hh
Q 011529 237 SGMYLGSVTGLAFSPFLIHR-------------FG---WPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQL--RP---AE 295 (483)
Q Consensus 237 ~~~~~g~~~g~~~~~~l~~~-------------~g---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~ 295 (483)
.+.++|..++..+--.+-+. .| -..-..+.+.+.++..+...++.+|++...... ++ .+
T Consensus 161 vG~~~Gyfls~tvFlalns~~f~Nky~r~~p~~~glvtl~~yl~fwg~~~l~~T~~v~~~k~E~~~~~~~~~~~~~~~~~ 240 (544)
T PF13000_consen 161 VGQTAGYFLSFTVFLALNSPDFCNKYLRSTPSDEGLVTLSGYLKFWGWVFLIVTILVAFFKKEKPHSESLPKIEPINKSD 240 (544)
T ss_pred hHhhhhHHHHHHHHHhhCCHHHHHHhcccCCCCCCeeeHHHHHHHHHHHHHHHHHHHheEeecccccccCcccccccccc
Confidence 77777777765544333210 11 122234456666666666666666654322110 00 00
Q ss_pred --HHHhhhcccCCC---CCccc-------chhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcchhhHHh
Q 011529 296 --KKLIVSSCASKE---PVKTI-------PWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFC 363 (483)
Q Consensus 296 --~~~~~~~~~~~~---~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 363 (483)
.+....+..+++ ..+.. .+..++|-|.+..+.+..+..-.++.........-+.| .|++.++.+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~i~~~Y~~l~~ilkLp~V~~li~ilL~~KigF~a~da~T~LKLlE-kG~~KE~LAl~~ 319 (544)
T PF13000_consen 241 GKSKEISIEYDESDVISTEEILSIKDVYKSLWKILKLPNVQTLIIILLTAKIGFQANDAVTSLKLLE-KGLSKEDLALLV 319 (544)
T ss_pred ccccccceecccccccchhhhhhHHHHHHHHHHHHcCchHHHHHHHHHHHHhccccchhhhHHHHHH-cCCCHHHhHHHH
Confidence 000000000000 11111 22345678888888888888888888877777778888 899999887776
Q ss_pred HHHHHHHHHHHHHHHHH
Q 011529 364 VLPWLTMAFSANLGGWI 380 (483)
Q Consensus 364 ~~~~~~~~i~~~~~g~l 380 (483)
.+..-..++...+.++.
T Consensus 320 li~~P~qii~~~~~~Kw 336 (544)
T PF13000_consen 320 LIDFPFQIILPYYIGKW 336 (544)
T ss_pred HHhhhHHHHHHHHhhhh
Confidence 54444444444444443
No 248
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.38 E-value=2.4e-05 Score=64.40 Aligned_cols=109 Identities=13% Similarity=0.172 Sum_probs=92.1
Q ss_pred HHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhh
Q 011529 143 LIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKW 222 (483)
Q Consensus 143 ~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~ 222 (483)
.-.++......+.+++.+.+.+++|.|+.++++.++..+-.+.. +.+ +.+.++..-++.|++.+..+++...++.+.
T Consensus 41 ~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~--~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~ 117 (156)
T PF05978_consen 41 YSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYP--NSYTLYPASALLGFGAALLWTAQGTYLTSY 117 (156)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-Hhh--hHHHHHHHHHHHhhhhHHhhHhhhHHHHHc
Confidence 34556666677788889999999999999999999988666554 445 778999999999999999999999999999
Q ss_pred cCCcchhHHHHHHHHHHHhHHHHHHhhHHHhh
Q 011529 223 VPVAERSRSLALVYSGMYLGSVTGLAFSPFLI 254 (483)
Q Consensus 223 ~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 254 (483)
.+++++++..++.......+.++|.++.-.+.
T Consensus 118 s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 118 STEETIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred CCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999888888888887765443
No 249
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.35 E-value=2.1e-05 Score=80.00 Aligned_cols=158 Identities=13% Similarity=0.002 Sum_probs=108.9
Q ss_pred hhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhcccH-HHHHHHHHHHh
Q 011529 127 ILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGL-PFLLVVRVFMG 205 (483)
Q Consensus 127 ~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~l~G 205 (483)
++.....+|.+......+... .........+...|++|||.....+.++..++.+...+...... +...+...+..
T Consensus 341 l~~~~~~lg~~~~~~~~~~~~---~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (521)
T KOG0255|consen 341 LSLNVSGLGGNIYLNFTLSGL---VELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGK 417 (521)
T ss_pred hhhhhhhcCchHHHHHHHHHH---HHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHH
Confidence 444555566555443333333 45555566689999999999999999999999998888763222 24555556666
Q ss_pred hhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHHHHHHhccCCC
Q 011529 206 IGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSP 285 (483)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (483)
++.+..+.....+..|++|...|..+.+.......+|.+++|.+...... ......+.+.+....+...+...+.|++.
T Consensus 418 ~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~lpet~ 496 (521)
T KOG0255|consen 418 FFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQ-MFPLLGLILFGWLALLLGLLSLLLLPETK 496 (521)
T ss_pred HHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcccchHHHHHHHHHHHHHHHHhcCcccC
Confidence 66666777779999999999999999999999999999999988755544 22222222245555555555555566654
Q ss_pred CCC
Q 011529 286 AED 288 (483)
Q Consensus 286 ~~~ 288 (483)
...
T Consensus 497 ~~~ 499 (521)
T KOG0255|consen 497 GKP 499 (521)
T ss_pred CCC
Confidence 443
No 250
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.35 E-value=9.8e-06 Score=74.86 Aligned_cols=132 Identities=17% Similarity=0.135 Sum_probs=111.8
Q ss_pred hHHhhhhh-hhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcC--CchHHHHHHHHHHHHHHHhhhhhcccHHHHHH
Q 011529 123 MSIAILPM-SAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVG--GKAVLGFGVVWWSIATALTPVAAKLGLPFLLV 199 (483)
Q Consensus 123 ~~~~~~~~-~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g--~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 199 (483)
+....+.+ .+.+|.++.|.|-+.+...+...+.+....+..||.. -+-.+..+..++.-..++..... ....+.+
T Consensus 280 ~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~--~~~~l~~ 357 (451)
T KOG2615|consen 280 LENTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLAR--TPVVLYL 357 (451)
T ss_pred HHhhHHHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccc--cchhhhH
Confidence 33333443 4779999999999999999999999999999999987 66667777777666667777777 6778888
Q ss_pred HHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhc
Q 011529 200 VRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR 256 (483)
Q Consensus 200 ~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 256 (483)
+..+..+..+...+....++....|+++||..+|+....+.++-++||+++|.+..+
T Consensus 358 ~s~l~sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~W 414 (451)
T KOG2615|consen 358 GSTLKSFSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSW 414 (451)
T ss_pred HHHHHHHHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEE
Confidence 889999998888999999999999999999999999999999999999999887653
No 251
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.29 E-value=3e-05 Score=77.85 Aligned_cols=148 Identities=17% Similarity=0.138 Sum_probs=106.4
Q ss_pred HHHHHHHHHHHHhhhhhhhHHhhhh-hhhhcCCCh---hhHHHHHHHHHHHHHHHHhhHHHHHhhcCCch-HHHHHHHHH
Q 011529 105 IVVLCFSAFLLCNMDRVNMSIAILP-MSAEFNWNP---ATVGLIQSSFFWGYLLTQIAGGIWADTVGGKA-VLGFGVVWW 179 (483)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~---~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~-~~~~~~~~~ 179 (483)
.+...++..++.++.......+.|. ...-++-+. ...++......++..++..+.|.+..+++|-| .++++.+++
T Consensus 311 ~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ 390 (599)
T PF06609_consen 311 GFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLM 390 (599)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHH
Confidence 3444445555555555555555665 333455444 35788888889999999999999999888744 456777777
Q ss_pred HHHHHHhhhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHH
Q 011529 180 SIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPF 252 (483)
Q Consensus 180 ~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 252 (483)
.+++.+++.....|....+...++.|++.|...........-..|+++.+.+.|+......+|+.+|..+..-
T Consensus 391 ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~ 463 (599)
T PF06609_consen 391 TAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNA 463 (599)
T ss_pred HHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 6665555544333555566778899999998888888888888899999999999999999998888765543
No 252
>PTZ00207 hypothetical protein; Provisional
Probab=98.24 E-value=1.6e-05 Score=80.25 Aligned_cols=174 Identities=6% Similarity=-0.056 Sum_probs=121.7
Q ss_pred HHHHHHHHHHHhhhhhhhHHhhhhhhhhc-CC-ChhhHHH-HHHHHHHHHHHHHhhHHHHHhhcCC--------chH-HH
Q 011529 106 VVLCFSAFLLCNMDRVNMSIAILPMSAEF-NW-NPATVGL-IQSSFFWGYLLTQIAGGIWADTVGG--------KAV-LG 173 (483)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~-s~~~~g~-~~~~~~~~~~~~~~~~g~l~dr~g~--------r~~-~~ 173 (483)
+++++..+++.......+..-+.++.+.+ |. ...+... +.++..++..+|.+..|.+....-+ |.. +.
T Consensus 355 ~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~ 434 (591)
T PTZ00207 355 LWCLLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALF 434 (591)
T ss_pred HHHHHHHHHHhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHH
Confidence 44455555554444444444566677778 65 2332233 7888899999999999988722211 222 33
Q ss_pred HHHHHHHHHHHHhhhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHH-HhhHHH
Q 011529 174 FGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTG-LAFSPF 252 (483)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g-~~~~~~ 252 (483)
+..+ +.++.+++++.. ....+++.-++.|++.|..++.....++|+|. |+-|+...+......+|..+- -.+.|.
T Consensus 435 ~~~~-~~~~~lll~~~~--p~~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~ 510 (591)
T PTZ00207 435 IPSV-CIITMLTLFLTL--PKAALPLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGE 510 (591)
T ss_pred HHHH-HHHHHHHHHHHC--CccHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHH
Confidence 3444 666666665554 33579999999999999999999999999998 999999999999999998776 567777
Q ss_pred hhhcc----------C---chHHHHHHHHHHHHHHHHHHHhccC
Q 011529 253 LIHRF----------G---WPSVFYSFGSLGTVWFTVWLSKAHS 283 (483)
Q Consensus 253 l~~~~----------g---~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (483)
+.|+- | ++..|++++.+++...+......-+
T Consensus 511 ~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l~~R 554 (591)
T PTZ00207 511 WYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTYVHLQ 554 (591)
T ss_pred HHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhheeee
Confidence 77531 2 6788999988888877766554433
No 253
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.24 E-value=1.8e-05 Score=78.49 Aligned_cols=70 Identities=10% Similarity=0.187 Sum_probs=62.5
Q ss_pred cChhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHH-hhcC
Q 011529 319 SKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTL-VSKG 388 (483)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~-g~~~ 388 (483)
+.+.++......+...+.++++..++|.|+++.+|+++.+++.+...+.....++.+++|+++||+ |+|+
T Consensus 7 ~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr 77 (493)
T PRK15462 7 QPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRM 77 (493)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHH
Confidence 345577777788888889999999999999998999999999999999999999999999999999 9884
No 254
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=98.18 E-value=0.0077 Score=58.24 Aligned_cols=282 Identities=8% Similarity=-0.025 Sum_probs=160.7
Q ss_pred CChhHHHHHHHHHHHHHHhhhhhhhHHhhhhhhhhcC---CChhhHHHHHHHHHH-HHHHHHhhHHHHHhhcCCchHHHH
Q 011529 99 FPKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFN---WNPATVGLIQSSFFW-GYLLTQIAGGIWADTVGGKAVLGF 174 (483)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~s~~~~g~~~~~~~~-~~~~~~~~~g~l~dr~g~r~~~~~ 174 (483)
.+..+..++.+.+..++..+..+.+-. +.+.+. .++..+.++-+..-+ +..+..++.+++.++..+.+++-.
T Consensus 22 ~r~E~~kflpl~Ll~f~I~~ny~~lR~----lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~ 97 (509)
T COG3202 22 RRYELKKFLPLALLFFCILFNYNLLRS----LKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYI 97 (509)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHH----hhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHH
Confidence 334455555555555555554443333 444443 456777888888877 677889999999999999998776
Q ss_pred HHHHHHHHHHHhhhhhc-------c-----------------------cHHHHHHHHHHHhhhhhcchh-HHHHHHhhhc
Q 011529 175 GVVWWSIATALTPVAAK-------L-----------------------GLPFLLVVRVFMGIGEGVAMP-AMNNILSKWV 223 (483)
Q Consensus 175 ~~~~~~~~~~~~~~~~~-------~-----------------------~~~~l~~~~~l~G~~~~~~~~-~~~~~~~~~~ 223 (483)
....+....+++++.-. . +.|...+..++.-+-...... .......|..
T Consensus 98 ~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeit 177 (509)
T COG3202 98 ILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEIT 177 (509)
T ss_pred HHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 66666666555544310 0 113333333333332233333 4577888999
Q ss_pred CCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccC----------chHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCh
Q 011529 224 PVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG----------WPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRP 293 (483)
Q Consensus 224 ~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (483)
..+|-.|.+++++...+++..++..+..++.++-. .+..+.+.+...+++..+..+..+...+.+.-...
T Consensus 178 t~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~~~~~~~~~~~~~~~~~~vi~~~~~i~~~l~~~~~r~il~~~~f~~~ 257 (509)
T COG3202 178 TIEEAKRFYPLFGLGANISLLLSGEVTSWLSKHRDALASEFKDLLLQILFIVIVILGIIAILLYRYINRNVLTDPLFYLR 257 (509)
T ss_pred hHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhHH
Confidence 88999999999999999999999998888876321 22333333333333333333332222111110000
Q ss_pred hhHHHhhhcccCCCCCcccchhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcch---hhHHhHHHHHH-
Q 011529 294 AEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTE---SGLFCVLPWLT- 369 (483)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~~- 369 (483)
..++ ++.+..+-.-..+++.+.|+|-++.+.+...+++.+.+.+....-.-.++.+..+... .+-+....++.
T Consensus 258 ~~~k---k~~~k~k~~~~~s~k~i~~SkyL~~ial~vl~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tgvv~ 334 (509)
T COG3202 258 AKKK---KKKKKLKLGLIESFKMILRSKYLGAIALLVLAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIWTGVVS 334 (509)
T ss_pred Hhcc---cccccccCcHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHHHHHHH
Confidence 0000 0000001111234667788898988888888888887777654444444423222222 23334444454
Q ss_pred HHHHHHHHHHHHHHHhhc
Q 011529 370 MAFSANLGGWIADTLVSK 387 (483)
Q Consensus 370 ~~i~~~~~g~l~dr~g~~ 387 (483)
.++...+++.+.+|.|..
T Consensus 335 ~v~~~~~~s~~ir~~GW~ 352 (509)
T COG3202 335 LVVFLFPGSNLIRRVGWF 352 (509)
T ss_pred HHHHHhhhHHHHHHhhHH
Confidence 455666788888888854
No 255
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.10 E-value=3.6e-05 Score=55.09 Aligned_cols=64 Identities=20% Similarity=0.265 Sum_probs=58.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcC
Q 011529 324 WALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKG 388 (483)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~ 388 (483)
+.+-...++...+...+..++|.|+++ .|+++.++|.+.++..+..+++.+++|.++||.++++
T Consensus 3 ~~lk~~yf~~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~ 66 (77)
T PF12832_consen 3 LPLKAFYFFYFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRK 66 (77)
T ss_pred hHHHHHHHHHHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccH
Confidence 345566788888899999999999998 8999999999999999999999999999999999884
No 256
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.99 E-value=0.00024 Score=69.81 Aligned_cols=125 Identities=18% Similarity=0.236 Sum_probs=110.6
Q ss_pred hhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHH-HHHhhcCCchHHHHHHHHHHHHHHHhhhhhcccHHHHHHHHHHHhh
Q 011529 128 LPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGG-IWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGI 206 (483)
Q Consensus 128 ~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g-~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~ 206 (483)
-.+...++++..+.+...+.......+++.+.. .+...+|-|+++..|++...+.....++.+ +.|+++...++.++
T Consensus 266 ~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~--~~w~~~~~~v~~~~ 343 (463)
T KOG2816|consen 266 LYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFAT--ETWMMFAAGVVVAL 343 (463)
T ss_pred EEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhc--cchhhhHHHHHHHh
Confidence 346778999999999988888888888888877 777788999999999999999999999999 88888888888777
Q ss_pred hhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhh
Q 011529 207 GEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH 255 (483)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 255 (483)
. ....+...+.++.+.+++++|+++++......+..+++|.+-+.+..
T Consensus 344 ~-~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~ 391 (463)
T KOG2816|consen 344 A-GIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFA 391 (463)
T ss_pred h-cchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHH
Confidence 6 56789999999999999999999999999999999999998887754
No 257
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.86 E-value=0.00012 Score=70.82 Aligned_cols=111 Identities=17% Similarity=0.278 Sum_probs=90.5
Q ss_pred hHHHHHHHHHHHHHHHhhhhhcc-------cHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCc---chhHHHHHHHHHH
Q 011529 170 AVLGFGVVWWSIATALTPVAAKL-------GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVA---ERSRSLALVYSGM 239 (483)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~---~r~~~~~~~~~~~ 239 (483)
|+++++.+++.+|.+++.++... +.+.++++..+.++|.|+.-|...++..|.++++ +|.+.+.++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 56788888888888875443211 2367889999999999999999999999999865 4678889999999
Q ss_pred HhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHHHHHHh
Q 011529 240 YLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSK 280 (483)
Q Consensus 240 ~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 280 (483)
++|..+++.+.+++.++.||...|.+.++..+++.+..+..
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~ 122 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSG 122 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCC
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999998888877766554
No 258
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.74 E-value=0.00044 Score=66.01 Aligned_cols=138 Identities=14% Similarity=0.109 Sum_probs=89.6
Q ss_pred HHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHH--HHHHHHHH-
Q 011529 109 CFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVV--WWSIATAL- 185 (483)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~--~~~~~~~~- 185 (483)
+.+.++..+.....+.+.+.. -.++.-...+.-+...+|.+|..++.--...+ |+ |++.+.+.+ +..+..++
T Consensus 252 L~lVY~aEY~InqGv~~tl~f-p~~~~~~r~~Y~~Y~~~YQ~GVFISRSS~~~~--ri--r~lwils~LQ~~nl~~~~l~ 326 (402)
T PF02487_consen 252 LFLVYFAEYFINQGVAPTLLF-PNSFFSPRDQYRWYQLLYQLGVFISRSSLPFF--RI--RRLWILSLLQVINLVFLLLQ 326 (402)
T ss_pred HHHHHHHHHHHHhchHHHhcC-CccCCCHHHHHHHHHHHHHHHHhhhhcceeee--eh--hhHHHHHHHHHHHHHHHHHH
Confidence 445555555544444333221 12233234566777777887766665433221 33 443333322 22222222
Q ss_pred --hhhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHh
Q 011529 186 --TPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFL 253 (483)
Q Consensus 186 --~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 253 (483)
.-+.+ +.|.+++..+..|+..|..+......+.+..++++|..++|....+-++|..++.+++-.+
T Consensus 327 s~~~fip--si~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 327 SWYRFIP--SIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHhh--HHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 23345 7888889999999999999999999999999999999999999999999999999887554
No 259
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=97.70 E-value=0.0012 Score=63.86 Aligned_cols=143 Identities=17% Similarity=0.137 Sum_probs=108.4
Q ss_pred hhHHHHHHHHHHHHHHHHhhHHHHHhhcCCc-------hHHHHHHHHHHHHHHHhhhh--------hcccHHHHHHHHHH
Q 011529 139 ATVGLIQSSFFWGYLLTQIAGGIWADTVGGK-------AVLGFGVVWWSIATALTPVA--------AKLGLPFLLVVRVF 203 (483)
Q Consensus 139 ~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r-------~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~~~~~l 203 (483)
-..++..+...+.-++..|+..++..|.+++ .-+.++..+.+.+.+++... ...+.++++...++
T Consensus 324 vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l 403 (498)
T COG3104 324 VPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVL 403 (498)
T ss_pred cCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHH
Confidence 3457788888888889999998888885443 12456666666666555433 11367899999999
Q ss_pred HhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHH------hhhccCchHHHHHHHHHHHHHHHHH
Q 011529 204 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPF------LIHRFGWPSVFYSFGSLGTVWFTVW 277 (483)
Q Consensus 204 ~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~------l~~~~g~~~~~~~~~~~~~~~~~~~ 277 (483)
+++|.=+..|...+++.+..|+.-.+..++.+-.....|..++..+++. ..+.......|+.++...++..+..
T Consensus 404 ~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~~~~~~F~~~g~v~i~~~~~~ 483 (498)
T COG3104 404 QSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAFIEGRVFGTIGVVAIVIGILL 483 (498)
T ss_pred HHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccccchhhhhhhhhhhHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999988887773 3333445667777777777766665
Q ss_pred HHhc
Q 011529 278 LSKA 281 (483)
Q Consensus 278 ~~~~ 281 (483)
+...
T Consensus 484 ~~~~ 487 (498)
T COG3104 484 LLLS 487 (498)
T ss_pred HHhh
Confidence 5443
No 260
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=97.64 E-value=0.01 Score=54.16 Aligned_cols=72 Identities=11% Similarity=0.155 Sum_probs=52.5
Q ss_pred HHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhc
Q 011529 149 FWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWV 223 (483)
Q Consensus 149 ~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~ 223 (483)
.+..+...++.+.++.++|.|+++.++...+......- +-+ .+..++......|++.+..+..--+++++.-
T Consensus 68 y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~N-l~p--r~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g 139 (390)
T KOG3097|consen 68 YLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIAAN-LEP--RYETLVPAGLVLGMAAGPIWASKGTYLTPMG 139 (390)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhh-cch--hHHhhccHHHhhccccccccccCcceecHHH
Confidence 33444556666689999999999998888776644432 223 5778888999999999988877766666554
No 261
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=97.59 E-value=0.00037 Score=67.70 Aligned_cols=110 Identities=14% Similarity=-0.061 Sum_probs=72.6
Q ss_pred HHhhHHHHHHHhCCCcch-hhHHhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhccchh
Q 011529 341 LTWMPTYYNQVLHFNLTE-SGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSP 419 (483)
Q Consensus 341 ~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (483)
..+...++.+.+|++..+ .|.+.+.+..+..+..+.+|++.||+|.|+ ++..+.+...+...+....+..
T Consensus 45 ~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~---------vL~l~~l~Wsl~t~L~~fa~Sl 115 (511)
T TIGR00806 45 ESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKP---------VLVLQALSFVCVWLLLLLGTSV 115 (511)
T ss_pred HHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchH---------HHHHHHHHHHHHHHHHHHHHHH
Confidence 444555666679999999 999999999999999999999999999884 3333344444443333344444
Q ss_pred HHHHHHHHHhhhhhhhhhchhhhhHhh-hccCcceeeeeeee
Q 011529 420 AMAVLCMACSQGTDAFSQSGLYSNHQD-IAPRYSVSIISINI 460 (483)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~g~~~ 460 (483)
..+.++-++.+...+... ....++.. .++++|+++.|+..
T Consensus 116 ~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~ 156 (511)
T TIGR00806 116 WHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSR 156 (511)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHH
Confidence 444444444444444444 55555555 45577898887543
No 262
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=97.58 E-value=0.002 Score=65.20 Aligned_cols=178 Identities=13% Similarity=0.128 Sum_probs=131.5
Q ss_pred hhHHHHHHHHHHHHHHhhhh-hhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhc-CCchHHHHHHHH
Q 011529 101 KRWFIVVLCFSAFLLCNMDR-VNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTV-GGKAVLGFGVVW 178 (483)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~ 178 (483)
..|+....+.....+.-+.. +.....+.++.++++.+...+.-....+.-......+.++.++|-+ ||-+++.++.++
T Consensus 34 g~~~s~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i 113 (571)
T KOG1237|consen 34 GGWLSAPFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLI 113 (571)
T ss_pred chhHhHHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 34444444333333333333 3345667778889998888888888888888889999999999975 899999999888
Q ss_pred HHHHHHHhhhhhc-------------c-------c---HHHHHHHHHHHhhhhhcchhHHHHHHhhhcC---C-c--chh
Q 011529 179 WSIATALTPVAAK-------------L-------G---LPFLLVVRVFMGIGEGVAMPAMNNILSKWVP---V-A--ERS 229 (483)
Q Consensus 179 ~~~~~~~~~~~~~-------------~-------~---~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~---~-~--~r~ 229 (483)
..++..+..+... . + ...+....-+..+|.|+.-+...++-+|-++ + + .+.
T Consensus 114 ~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~ 193 (571)
T KOG1237|consen 114 SLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIP 193 (571)
T ss_pred HHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcc
Confidence 8888655432210 0 0 1356666778888999999999999999997 2 2 224
Q ss_pred HHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHHHHH
Q 011529 230 RSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWL 278 (483)
Q Consensus 230 ~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 278 (483)
..+.++....++|..++-.+.-+..+..+|...|.+..+..+++.++++
T Consensus 194 ~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~ 242 (571)
T KOG1237|consen 194 SFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFL 242 (571)
T ss_pred cchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHH
Confidence 7888999999999999999888888889999999888877776665554
No 263
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.57 E-value=9.2e-05 Score=70.26 Aligned_cols=178 Identities=10% Similarity=-0.060 Sum_probs=117.0
Q ss_pred HHHHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCC-chHHHHHHHHHHHHHH
Q 011529 106 VVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGG-KAVLGFGVVWWSIATA 184 (483)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~-r~~~~~~~~~~~~~~~ 184 (483)
+.++.+.+.+.....+.....+......-|.+....|++.....++..+++.+.|.+.||.+. |.++++......++..
T Consensus 268 F~il~~~ygi~~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~ 347 (480)
T KOG2563|consen 268 FIILAICYGIGLGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTL 347 (480)
T ss_pred HHHHHHHHhhhHHHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 344444444444444444555554555667777889999999999999999999999999865 5555555555555532
Q ss_pred Hhhhhh-c-ccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccC----
Q 011529 185 LTPVAA-K-LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG---- 258 (483)
Q Consensus 185 ~~~~~~-~-~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g---- 258 (483)
...... . ...+.+.....+.|++.....|...-+-.|..-|..-+.-.|+.+..+++-.++-..+.+...+..+
T Consensus 348 ~l~~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~ 427 (480)
T KOG2563|consen 348 MLLTCTLFLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGN 427 (480)
T ss_pred HHHHhhccCCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCC
Confidence 222221 1 1335666777788888888899888888887666666778888888888888888888888877665
Q ss_pred chHHHHHHHHHHHHHHHHHHHhccC
Q 011529 259 WPSVFYSFGSLGTVWFTVWLSKAHS 283 (483)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (483)
+...-+......++..++..+++++
T Consensus 428 ~~~~~i~~~~~~~l~~~lva~~r~~ 452 (480)
T KOG2563|consen 428 TFPANIFLTVSALLGAILVAFFRPD 452 (480)
T ss_pred CccchhHhHHHHHHHHHHHhhhhhh
Confidence 4333333444444444444444444
No 264
>PRK03612 spermidine synthase; Provisional
Probab=97.57 E-value=0.009 Score=60.17 Aligned_cols=142 Identities=17% Similarity=0.167 Sum_probs=86.2
Q ss_pred hhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHH-HHHH-HHHHHHHhhhhhcc--cH-HHHHHHHHHH
Q 011529 130 MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGF-GVVW-WSIATALTPVAAKL--GL-PFLLVVRVFM 204 (483)
Q Consensus 130 ~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~-~~~~-~~~~~~~~~~~~~~--~~-~~l~~~~~l~ 204 (483)
+..-+|-+....+.+.+++.++..+|..+.+++.++.-++...+- +..+ ..++..+....... .. ..++...++.
T Consensus 41 l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~ 120 (521)
T PRK03612 41 ASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFVAVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLI 120 (521)
T ss_pred HHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445578889999999999999999999999988744332222111 1111 11111111111100 11 2233445566
Q ss_pred hhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhh-ccCchHHHHHHHHHHHH
Q 011529 205 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH-RFGWPSVFYSFGSLGTV 272 (483)
Q Consensus 205 G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-~~g~~~~~~~~~~~~~~ 272 (483)
++..|...|....+..+.. .++-++..|.......+|+++|.++.+++.- .+|-....++.+.+.++
T Consensus 121 ~~l~G~~~Pl~~~~~~~~~-~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~ 188 (521)
T PRK03612 121 GLLIGMEIPLLMRILQRIR-DQHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLL 188 (521)
T ss_pred HHHHHHHHHHHHHHHHhcc-ccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 7877888777777665533 3345778899999999999999998887654 67755444444444433
No 265
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=97.54 E-value=0.00031 Score=67.01 Aligned_cols=131 Identities=12% Similarity=0.087 Sum_probs=88.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHH
Q 011529 325 ALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFL 404 (483)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~ 404 (483)
.+.+...+...-.+.+-...+- .++.++.++...|++...+.+...+..++.|++.||+.|++++..+. .
T Consensus 37 il~~vnlmny~Dr~~iagv~~~-v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~---------~ 106 (493)
T KOG1330|consen 37 ILCLVNLMNYADRYTIAGVLKE-VQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGI---------F 106 (493)
T ss_pred HHHHHHHHHHhhhhhhhhhhHH-HHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHH---------H
Confidence 3444444444433444333333 23448999999999999999999999999999999999996554443 3
Q ss_pred HHHHHHHHhhccchhHHHHHHHHHhhhhhhhhhchhhhhHhhhccC-cceeeee-eeecCCCC
Q 011529 405 GPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPR-YSVSIIS-INILRAPG 465 (483)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g-~~~~~~~g 465 (483)
+.....+.......+|.++++=.+-+.+.....+...+.+.|..++ +|++.++ +++....|
T Consensus 107 iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvG 169 (493)
T KOG1330|consen 107 IWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVG 169 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccc
Confidence 3333333333346677777777777777777788888999998875 5899888 33333333
No 266
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.23 E-value=0.0034 Score=61.09 Aligned_cols=130 Identities=16% Similarity=0.065 Sum_probs=97.9
Q ss_pred hhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHh---hhhhc-----cc
Q 011529 122 NMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALT---PVAAK-----LG 193 (483)
Q Consensus 122 ~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~---~~~~~-----~~ 193 (483)
.+...+..+....|+++..+|..-+...+....+.+...++.+|+|..|.-.++...-.++..+. .+.+. .+
T Consensus 276 sf~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s 355 (432)
T PF06963_consen 276 SFGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSIS 355 (432)
T ss_pred cCcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhH
Confidence 34555555666669999999999999999999999999999999999888777766444333222 12221 13
Q ss_pred HHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHH
Q 011529 194 LPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSP 251 (483)
Q Consensus 194 ~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 251 (483)
...++.+-++.=+|.=....+..-++.|..|+++||...|......++--++-..++-
T Consensus 356 ~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~i 413 (432)
T PF06963_consen 356 AYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTI 413 (432)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 3445555555556666778888889999999999999999999999988888776653
No 267
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=97.22 E-value=0.0017 Score=57.35 Aligned_cols=101 Identities=14% Similarity=0.117 Sum_probs=56.8
Q ss_pred cchhHHHHHHHHHHHhHHHHHHhh--HH-Hhhh--ccCchHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhh
Q 011529 226 AERSRSLALVYSGMYLGSVTGLAF--SP-FLIH--RFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIV 300 (483)
Q Consensus 226 ~~r~~~~~~~~~~~~~g~~~g~~~--~~-~l~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (483)
++|+....+...+.++|.++.-.. .. -..+ .-.|++.+.+.+++.++.+++..++-.+-....+. +++++.
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ifGk~fd~~~~~-~k~~k~--- 77 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIFGKNFDIYSPK-EKQEKE--- 77 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCcc-cccccc---
Confidence 455666666677777777765332 22 0111 23599999988888877777766664332111111 011100
Q ss_pred hcccCCCCCcccchhhhhcChhHHHHHHHHHHHH
Q 011529 301 SSCASKEPVKTIPWGLILSKPPVWALIVSHFCHN 334 (483)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (483)
..+..++....+.+|+|..|...+.+....
T Consensus 78 ----~~~~~~~~s~~~~LK~K~tw~w~~~Yg~wL 107 (267)
T PF07672_consen 78 ----NSTLSKKPSYKSILKEKETWKWILIYGIWL 107 (267)
T ss_pred ----cccccccchHHHHHccchHHHHHHHHHHHh
Confidence 001112356778999999998777666544
No 268
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=97.17 E-value=0.001 Score=64.84 Aligned_cols=182 Identities=14% Similarity=0.157 Sum_probs=111.3
Q ss_pred CChhHHHHHHHHHHHHHHhhhhhhhHHhh-hhhhhhcCCChhhH----HHHHHHHHHHHHHHHhhHHHHH-hhcCCchHH
Q 011529 99 FPKRWFIVVLCFSAFLLCNMDRVNMSIAI-LPMSAEFNWNPATV----GLIQSSFFWGYLLTQIAGGIWA-DTVGGKAVL 172 (483)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~s~~~~----g~~~~~~~~~~~~~~~~~g~l~-dr~g~r~~~ 172 (483)
.+..|.....+....+...+......... +.....++.+..+. |...++..+......+..+... -++..|+.+
T Consensus 257 ~~~d~~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~~~gi~~~~~g~ls~~~~l~~~f~~l~~i~~r~~~ 336 (488)
T KOG2325|consen 257 PKLDWVAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVLYNGITLSISGILSVILLLLYIFTRLGKIDKRRII 336 (488)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHHhhhhHHHHHHHHHHHHHHHHHHHHhhhhccceee
Confidence 34455566666666666555555433333 33455566655544 4444444444444444444433 233445555
Q ss_pred HHHHHHHHHHHHHhhh----hh-----c--------------------ccHHHHHHH-HHHHhhhhhcchhHHHHHHhhh
Q 011529 173 GFGVVWWSIATALTPV----AA-----K--------------------LGLPFLLVV-RVFMGIGEGVAMPAMNNILSKW 222 (483)
Q Consensus 173 ~~~~~~~~~~~~~~~~----~~-----~--------------------~~~~~l~~~-~~l~G~~~~~~~~~~~~~~~~~ 222 (483)
..+.++......+... .. . .+.+.+++. -++.|.+.-.......++-++.
T Consensus 337 ~~g~l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~~~~~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~~~tlySki 416 (488)
T KOG2325|consen 337 LLGFLIFFLSYYIFTYPWGFYSGPVQPYNTTYAGCDFEEYSWCDTTTAVPLILYLISFIVVFGIAFPFISTALDTLYSKI 416 (488)
T ss_pred eehHHHHHHhhheeeeeccccccccccccccccCcCcccchhhccCcccChhhheeehhheeccccccccchHHHHHHHH
Confidence 5554443333332211 00 0 012233333 4566777777778889999999
Q ss_pred cCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHHHHHHh
Q 011529 223 VPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSK 280 (483)
Q Consensus 223 ~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 280 (483)
..+++++...++++....++..+||++........|.++.+.+.....++...++...
T Consensus 417 Lgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g~~~v~~~~~~~~l~~~~l~~~~ 474 (488)
T KOG2325|consen 417 LGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLSGPRPVWIILLCLLLVVAALWIVF 474 (488)
T ss_pred hCCccccceeEEEEeccchhhhhhHHHHhhhHHhcCccHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998998888777766666555444433
No 269
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=97.13 E-value=0.013 Score=55.65 Aligned_cols=113 Identities=11% Similarity=0.017 Sum_probs=53.4
Q ss_pred HHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHH----HHHhhHHHHHhhcCCchHHHHHHHHH-HHH--
Q 011529 110 FSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYL----LTQIAGGIWADTVGGKAVLGFGVVWW-SIA-- 182 (483)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~----~~~~~~g~l~dr~g~r~~~~~~~~~~-~~~-- 182 (483)
++..+-....++.+....+++.+++-.+.. .-.....+.+... +....-..+.-|. |+++ ..+.... .+.
T Consensus 24 ~llGiG~LlpWN~fiTa~~y~~~~~~~~~~-~~~F~~~~~~~a~i~~ll~~~~n~~~~~~~-~~~~-~~~l~~~~il~i~ 100 (406)
T KOG1479|consen 24 LLLGIGTLLPWNMFITASDYYYYRFPGYHN-SKNFTSSYTLAAQIPLLLFNLLNAFLNTRL-RTRV-GYLLSLIAILFIV 100 (406)
T ss_pred HHHhcccccchHhhhccHHHHHhhcCCCch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH-HHHHHHHHHHHHH
Confidence 333333445566666667776666544333 3333333444444 4444444444442 1221 1111111 111
Q ss_pred HHHhhhh-----hcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCc
Q 011529 183 TALTPVA-----AKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVA 226 (483)
Q Consensus 183 ~~~~~~~-----~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~ 226 (483)
.+..... ....++..++..++.+.+.+..........++ +|+|
T Consensus 101 ~l~~~~v~~~~~~~~ff~vt~~~vv~~~~a~a~~qgs~~G~a~~-~P~~ 148 (406)
T KOG1479|consen 101 TLDLALVKTDTWTNGFFLVTLIIVVLLNLANAVVQGSLYGLAGL-FPSE 148 (406)
T ss_pred HHHHHhhccCCccchhHHHHHHHHHHHhhhhhhhccchhhhhhc-CCHH
Confidence 1111221 11135566677778888888777777776665 4444
No 270
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=97.05 E-value=0.0036 Score=56.10 Aligned_cols=117 Identities=11% Similarity=0.069 Sum_probs=68.3
Q ss_pred HHHHHHHhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhh-
Q 011529 336 GTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLS- 414 (483)
Q Consensus 336 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 414 (483)
..+.+..|.|. +++.+|+++++...+.....++..+| ++.|.+.|++|.+. ...+.......+..+....
T Consensus 17 t~Y~Fs~yS~~-Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~-------~l~iG~~~~~~GY~~~~l~~ 87 (250)
T PF06813_consen 17 TTYTFSAYSPQ-LKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWV-------VLLIGAVLGFVGYGLLWLAV 87 (250)
T ss_pred cccchhhhhHH-HHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHH-------HHHHHHHHHHHHHHHHHHHH
Confidence 33455555555 45569999999999999988888875 88999999999772 2222222222222222221
Q ss_pred -c-c--chhHHHHHHHHHhhhhhhhhhchhhhhHhhhccCcceeeeeeeec
Q 011529 415 -H-V--DSPAMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSVSIISINIL 461 (483)
Q Consensus 415 -~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 461 (483)
. . ...+.+.+...++................+..|++||.+.|+.-+
T Consensus 88 ~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~~RG~vvgilk~ 138 (250)
T PF06813_consen 88 SGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPRSRGTVVGILKG 138 (250)
T ss_pred hCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCccccCceehhhhH
Confidence 1 1 223333333334433333333434444446678999999986544
No 271
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.92 E-value=0.068 Score=52.31 Aligned_cols=143 Identities=14% Similarity=0.210 Sum_probs=95.9
Q ss_pred HHHHHHHHhhhhhhhHHhhhh-h--hhhcCCCh-hhHHHHHHHHHHHHHHHHhhHHHHHhh---cCCchHHHHHHHHHHH
Q 011529 109 CFSAFLLCNMDRVNMSIAILP-M--SAEFNWNP-ATVGLIQSSFFWGYLLTQIAGGIWADT---VGGKAVLGFGVVWWSI 181 (483)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~-~--~~~~g~s~-~~~g~~~~~~~~~~~~~~~~~g~l~dr---~g~r~~~~~~~~~~~~ 181 (483)
+....+..+.....+....|. + ....+.+. ...++......++..+++.+.+.+.+| +|+++.+.++..+..+
T Consensus 245 L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~ 324 (461)
T KOG3098|consen 245 LFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLI 324 (461)
T ss_pred HHHHHHHHHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHH
Confidence 333444444444444444444 2 21233333 334444455666666777777777754 7899999988888887
Q ss_pred HHHHhhhhhc----------------ccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHH
Q 011529 182 ATALTPVAAK----------------LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVT 245 (483)
Q Consensus 182 ~~~~~~~~~~----------------~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~ 245 (483)
+.++..+... .++...++..++.|++.+........++.+.+ +++|..+.++...-..++..+
T Consensus 325 ~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v 403 (461)
T KOG3098|consen 325 GFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCV 403 (461)
T ss_pred HHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHH
Confidence 7776543321 03457788889999999999999999999999 788899999988888888777
Q ss_pred HHhhHHH
Q 011529 246 GLAFSPF 252 (483)
Q Consensus 246 g~~~~~~ 252 (483)
+-.....
T Consensus 404 ~~f~~~~ 410 (461)
T KOG3098|consen 404 AFFFSPY 410 (461)
T ss_pred Hhhhhhh
Confidence 6555443
No 272
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=96.90 E-value=0.013 Score=57.92 Aligned_cols=123 Identities=15% Similarity=0.136 Sum_probs=97.4
Q ss_pred CChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhh-hhhcc-------cHHHHHHHHHHHhhh
Q 011529 136 WNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTP-VAAKL-------GLPFLLVVRVFMGIG 207 (483)
Q Consensus 136 ~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~-~~~~~-------~~~~l~~~~~l~G~~ 207 (483)
.++...|.+..+..++..++..+.....-+..-|+++.++.++.++..+.-. +.... +.+..+.--++..+.
T Consensus 252 fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~ 331 (433)
T PF03092_consen 252 FSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVI 331 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHH
Confidence 8999999999999999999999999888888889998888877776655422 11110 123334445666666
Q ss_pred hhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccC
Q 011529 208 EGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG 258 (483)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g 258 (483)
....+-....+++++.|+..-|..+++.....++|..++..++..+.+.++
T Consensus 332 ~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~ 382 (433)
T PF03092_consen 332 GMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFG 382 (433)
T ss_pred HHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 667777778899999999999999999999999999999999999887665
No 273
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=96.88 E-value=0.035 Score=54.60 Aligned_cols=112 Identities=13% Similarity=0.038 Sum_probs=76.0
Q ss_pred hHHHHHHHHHHHHHHHHhhHHHHHhhcCCc-hHHHHHHHHHHHHHHHhhhhhc----------ccHHHHHHHHHHHhhhh
Q 011529 140 TVGLIQSSFFWGYLLTQIAGGIWADTVGGK-AVLGFGVVWWSIATALTPVAAK----------LGLPFLLVVRVFMGIGE 208 (483)
Q Consensus 140 ~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r-~~~~~~~~~~~~~~~~~~~~~~----------~~~~~l~~~~~l~G~~~ 208 (483)
..-++..++.++..+|..+..+.. .-++| +.+.+..+.-.+..-++.++.. .+-+..++..++.|+..
T Consensus 308 ~~~i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltn 386 (437)
T TIGR00939 308 YPIICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSN 386 (437)
T ss_pred HHHHHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhh
Confidence 344566777888888777554321 11222 1344444444443333222110 15567778899999999
Q ss_pred hcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHH
Q 011529 209 GVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPF 252 (483)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 252 (483)
|-.......+..+..++++|..+-.+...+..+|..+|..++-.
T Consensus 387 Gy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~ 430 (437)
T TIGR00939 387 GYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFL 430 (437)
T ss_pred hHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999877533
No 274
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=96.74 E-value=0.1 Score=51.40 Aligned_cols=100 Identities=14% Similarity=-0.011 Sum_probs=53.3
Q ss_pred HHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHH-hhh----hh-cccHHHHHHHHHHHhhhhhcchhHHHHH
Q 011529 145 QSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATAL-TPV----AA-KLGLPFLLVVRVFMGIGEGVAMPAMNNI 218 (483)
Q Consensus 145 ~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~-~~~----~~-~~~~~~l~~~~~l~G~~~~~~~~~~~~~ 218 (483)
.....+...+..+..-.+..|+..|.=+..++++..+..++ ..+ .+ ...++..++..++.|++.+.......++
T Consensus 51 ~~~~~v~~l~~~~~~~~~~~~i~~~~Ri~~~lv~~~~~~~~~~~l~~~~~~~~~~f~~~~~~v~~~g~~~~~~q~s~~gl 130 (437)
T TIGR00939 51 TLASQLPSLLFNSLNLFLIFRIPVTVRLLGGLVILLVVVILVMVLVKVQTSETGFFVTTMASVVIINSGMALLQGSLFGL 130 (437)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCccchhHHHHHHHHHHHHHHhheeeecCCcchHHHHHHHHHHHHHhhhhhhcccchhh
Confidence 33444555555555555666665433233343322222211 111 11 1135666777788899988888887777
Q ss_pred HhhhcCCcchhHHHHHHHHHHHhHHHHHHhh
Q 011529 219 LSKWVPVAERSRSLALVYSGMYLGSVTGLAF 249 (483)
Q Consensus 219 ~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~ 249 (483)
.+ .+|++ .++.+..+.+++++++.++
T Consensus 131 a~-~fp~~----~~~a~~~G~g~aGv~~s~~ 156 (437)
T TIGR00939 131 AG-VFPST----YSSAVMSGQGLAGVLTSLA 156 (437)
T ss_pred cc-cCCHH----HHHHHHhcchhHHHHHHHH
Confidence 76 45543 4555556666666555543
No 275
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=96.61 E-value=0.084 Score=49.44 Aligned_cols=57 Identities=14% Similarity=0.183 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcC
Q 011529 331 FCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKG 388 (483)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~ 388 (483)
.+...+...-..|.=..+++ +|++..+++.++....+...+...+.|.+.||+|||+
T Consensus 44 ~La~~aDWLQGpY~Y~LY~~-yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~ 100 (354)
T PF05631_consen 44 LLAMAADWLQGPYLYALYES-YGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKK 100 (354)
T ss_pred HHHHHHHHhhcchhHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchH
Confidence 33334443333333334444 8999999999999999999999999999999999884
No 276
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=96.53 E-value=0.0022 Score=66.53 Aligned_cols=59 Identities=10% Similarity=-0.099 Sum_probs=46.5
Q ss_pred HHHHHHHhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHH
Q 011529 336 GTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTV 394 (483)
Q Consensus 336 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~~~~~~~ 394 (483)
...++....-.-++++++++..+.|++.+.+.++.+++.++.+++.||.+|++.+..+.
T Consensus 47 ~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ 105 (633)
T TIGR00805 47 LYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGC 105 (633)
T ss_pred HHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecH
Confidence 33444433334455569999999999999999999999999999999999997665553
No 277
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=96.48 E-value=0.0098 Score=53.76 Aligned_cols=138 Identities=15% Similarity=0.126 Sum_probs=94.0
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHh
Q 011529 141 VGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILS 220 (483)
Q Consensus 141 ~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~ 220 (483)
.|.+...-.+...+..+.+....||+....-+.+..++.+.+..+.++++ +.++-+.+..+..++.|..-....++.+
T Consensus 64 tg~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~--s~~~sL~GV~~aSissGlGEiTFL~lss 141 (409)
T KOG3880|consen 64 TGAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSN--SVPMSLLGVVFASISSGLGEITFLALSS 141 (409)
T ss_pred cchhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEecc--chhHHHhhhhhhhhcCCcceeehhhhhc
Confidence 45555566677777788888889987655556667778888888889998 8898888888888888776655555444
Q ss_pred hhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhc--cCchHHHHHHHHHHHHHHHHHHHhccCCC
Q 011529 221 KWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR--FGWPSVFYSFGSLGTVWFTVWLSKAHSSP 285 (483)
Q Consensus 221 ~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (483)
+ +++. ..+.++.+.+.++++|..--..+.+. +..+.+.++...+.++.+...++..++++
T Consensus 142 ~-Y~~~----~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~pe 203 (409)
T KOG3880|consen 142 R-YPSI----VIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKSPE 203 (409)
T ss_pred c-CCCc----eeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCCCc
Confidence 3 3322 34556666666677776655555553 45677777777776666666655555443
No 278
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=96.35 E-value=0.00091 Score=67.53 Aligned_cols=155 Identities=14% Similarity=0.126 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhHHhhhh-hhhhcCCChhhHHHHHHHHHH-HHHHHHhhHHHHHhhcC--CchHHHHHHH
Q 011529 102 RWFIVVLCFSAFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFW-GYLLTQIAGGIWADTVG--GKAVLGFGVV 177 (483)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~-~~~~~~~~~g~l~dr~g--~r~~~~~~~~ 177 (483)
+...+....++..........+..+.|. +..+|+.++.+.+++..+..+ +.+++.+++|++..|+. .|..+....+
T Consensus 303 ~Np~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v 382 (539)
T PF03137_consen 303 TNPVFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIV 382 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHH
Confidence 3445666666777777777777888887 777899999999998876655 66688899999999874 3444443333
Q ss_pred HHHHHHHH---hhh--h---------hcc--------------------------------------cHHHHHHHHHHHh
Q 011529 178 WWSIATAL---TPV--A---------AKL--------------------------------------GLPFLLVVRVFMG 205 (483)
Q Consensus 178 ~~~~~~~~---~~~--~---------~~~--------------------------------------~~~~l~~~~~l~G 205 (483)
...++.++ ..+ . ..+ .+..+++..++.-
T Consensus 383 ~~~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~ 462 (539)
T PF03137_consen 383 VSIVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILS 462 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHH
Confidence 33333222 000 0 000 1233444444444
Q ss_pred hhhhcchhHHHHHHhhhcCCcchhHHHHHHHHH-HHhHHHHHHhhHHHhhhc
Q 011529 206 IGEGVAMPAMNNILSKWVPVAERSRSLALVYSG-MYLGSVTGLAFSPFLIHR 256 (483)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-~~~g~~~g~~~~~~l~~~ 256 (483)
+..+.........+-+.+++++|..++|+.... ..+|.+-||++.|.++|.
T Consensus 463 ~~~~~~~~p~~~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~ 514 (539)
T PF03137_consen 463 FFTFMSQVPSTLITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDS 514 (539)
T ss_dssp ----------------------------------------------------
T ss_pred HHHHhcccchheeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhh
Confidence 555555566666777889999999999996655 457788999999999885
No 279
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=96.28 E-value=0.041 Score=39.83 Aligned_cols=52 Identities=15% Similarity=0.243 Sum_probs=43.5
Q ss_pred HHHHHHHHhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhc
Q 011529 335 WGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSK 387 (483)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~ 387 (483)
.+-+.+...+|...++ .++|..+.+++.+...++..+|.+...++.++.+++
T Consensus 6 igRFayTplLP~M~~~-~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~ 57 (85)
T PF06779_consen 6 IGRFAYTPLLPLMQAD-GGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPR 57 (85)
T ss_pred hHHHHHHhHhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHH
Confidence 3445666788888877 899999999999999999999999999988875544
No 280
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=96.11 E-value=0.008 Score=48.47 Aligned_cols=87 Identities=13% Similarity=0.059 Sum_probs=47.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHhhhhhhhhhchhhh
Q 011529 363 CVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLYS 442 (483)
Q Consensus 363 ~~~~~~~~~i~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (483)
.+...++..++.++.+++.||+++|+.. . .+..............++.+.......+.+.......+....
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~-------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 74 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVL-------L--VGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAA 74 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHH-------H--HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 3455678889999999999999988432 1 111111122222222233343333334433344444555666
Q ss_pred hHhhhcc-Ccceeeeee
Q 011529 443 NHQDIAP-RYSVSIISI 458 (483)
Q Consensus 443 ~~~~~~~-~~~g~~~g~ 458 (483)
...+..| ++++.+.++
T Consensus 75 ~~~~~~~~~~~~~~~~~ 91 (141)
T TIGR00880 75 LIADIYPPEERGVALGL 91 (141)
T ss_pred HHHHHCChhhhhHHHHH
Confidence 6666654 557777764
No 281
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.90 E-value=0.043 Score=56.37 Aligned_cols=153 Identities=12% Similarity=0.098 Sum_probs=101.1
Q ss_pred HHHHHHHHHHHHHhhhhhhhHHhhhh-hhhhcCCChhhHHHHHHHHHHH-HHHHHhhHHHHHhhcC--CchHHHHHHHHH
Q 011529 104 FIVVLCFSAFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWG-YLLTQIAGGIWADTVG--GKAVLGFGVVWW 179 (483)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~-~~~~~~~~g~l~dr~g--~r~~~~~~~~~~ 179 (483)
.+.....++..+.......+..++|. +.++||.+...+..+.+...+. .+++.+++|++..|+. .|....+.++..
T Consensus 392 ~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~ 471 (735)
T KOG3626|consen 392 PIFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCS 471 (735)
T ss_pred chHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHH
Confidence 35666667777777777777888888 7778999999999998665554 5577788999999874 344443333333
Q ss_pred HHHHHH---hhhh-------------------------------------------------------------------
Q 011529 180 SIATAL---TPVA------------------------------------------------------------------- 189 (483)
Q Consensus 180 ~~~~~~---~~~~------------------------------------------------------------------- 189 (483)
.+..+. ..+.
T Consensus 472 ~l~l~~~~~~~~igC~~~~~aG~~~~y~~~~~~~~~~~~~s~Cn~~C~C~~~~~~PVCg~~G~tY~SpChAGC~~~~~~~ 551 (735)
T KOG3626|consen 472 VLSLLFYSLLFFIGCESSPVAGVTNSYEGSPAFTSHENPFSSCNSDCSCDTSEYEPVCGENGITYFSPCHAGCTESSGTS 551 (735)
T ss_pred HHHHHHHHHHHEecCCCCcccceecCCCCCCccccCCCchhhhhcCCCCCCcCcCcccCCCCCEEeChhhhCCcccccCC
Confidence 333222 0000
Q ss_pred ------------h----c--------------ccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHH-
Q 011529 190 ------------A----K--------------LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSG- 238 (483)
Q Consensus 190 ------------~----~--------------~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~- 238 (483)
+ . ..+..+++..++.-+..+...+....++-+.+++|+|..++|+..+.
T Consensus 552 ~~~~~ytnCsCv~~~~~~~~~a~~G~C~~~c~~~~~~Fl~~~~~~sf~~~~~~~p~~~i~LR~V~~e~ks~AlG~~~~~i 631 (735)
T KOG3626|consen 552 DGNTIYTNCSCVPTNKNGNGSAKKGYCPNDCCRQFLIFLALFAIGSFIGALGAVPGMLIVLRCVPPEEKSFALGFQWMLI 631 (735)
T ss_pred CCceeeccccccccccCCCceeecCCCCCCcchhhHHHHHHHHHHHHHHHhccCcceEEEEEccCchhchhhhHHHHHHH
Confidence 0 0 00223444444444444455566667778889999999999996555
Q ss_pred HHhHHHHHHhhHHHhhhc
Q 011529 239 MYLGSVTGLAFSPFLIHR 256 (483)
Q Consensus 239 ~~~g~~~g~~~~~~l~~~ 256 (483)
..+|.+-+|++-|+++|.
T Consensus 632 rllg~IPsPIifG~~ID~ 649 (735)
T KOG3626|consen 632 RLLGFIPSPIIFGAVIDT 649 (735)
T ss_pred HHHhcCCchHhhhhhHhh
Confidence 457888899999999873
No 282
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=95.85 E-value=0.0014 Score=57.45 Aligned_cols=215 Identities=11% Similarity=0.111 Sum_probs=116.4
Q ss_pred HHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHH---------HhhcCCchHH-HHHHH
Q 011529 108 LCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIW---------ADTVGGKAVL-GFGVV 177 (483)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l---------~dr~g~r~~~-~~~~~ 177 (483)
....+.+.+-....+....+-.+.++.|.++.....++.+..+..++..++.|.. .||+|||+.. .++.+
T Consensus 21 ~yGvGHmlNDitAScWFTYlllfltqiglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~~~wh~~gt~ 100 (412)
T KOG4830|consen 21 AYGVGHMLNDITASCWFTYLLLFLTQIGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRRMSWHLIGTV 100 (412)
T ss_pred eechhHHHhhHHHHHHHHHHHHHHHHhcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhhcceeeeeecccE
Confidence 3456667776666666666667788889999998899999999999999988744 4689988753 22222
Q ss_pred HHHHHH-HHhhh--------hh--cccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHH
Q 011529 178 WWSIAT-ALTPV--------AA--KLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTG 246 (483)
Q Consensus 178 ~~~~~~-~~~~~--------~~--~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g 246 (483)
+..++. ..+.+ .. ..|..++.+..++.|++.+...-...+.
T Consensus 101 lVslSf~~ifg~a~iF~~~~~~s~vanlglyaialvVFgv~~A~~ke~tea~---------------------------- 152 (412)
T KOG4830|consen 101 LVSLSFPMIFGFAKIFLCKSTTSEVANLGLYAIALVVFGVGWASVKESTEAL---------------------------- 152 (412)
T ss_pred EEEEechhhcCceeEEeeccHHHHHHHhHHHHHHhheeeeeeecccccHHHH----------------------------
Confidence 111110 00000 00 0012222222222333222111100000
Q ss_pred HhhHHHhhhccCchHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCChhhHHHhhhcccCCCCCcccchhhhhcChhHHHH
Q 011529 247 LAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWAL 326 (483)
Q Consensus 247 ~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (483)
.|+.-|....+.+...++++...+++. ..-..++.+. ...+|..-+++-.+..+
T Consensus 153 ------------~R~~~~~~v~lG~~~~~vF~~~TrEP~-~~~~~~~s~~-------------~Rm~W~~WF~~v~~YQi 206 (412)
T KOG4830|consen 153 ------------IRLAGWLVVVLGITVAFVFYAFTREPT-NSFSSDASEL-------------VRMHWTSWFGHVQFYQI 206 (412)
T ss_pred ------------HHHhhhheeeeceeEEEEEeecccCcc-cccCcchhhh-------------hcccchhhhhhhHHHHH
Confidence 122222222222211112222222221 1111111111 13456666777788888
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHH
Q 011529 327 IVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANL 376 (483)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~ 376 (483)
.+.+.+.-...+.-..+++.|..+.+.++....+++-.+..+.....+.+
T Consensus 207 AllYmLsRL~iNiSQaYlaFfviddlqm~qsakAllP~v~Yl~SF~VS~v 256 (412)
T KOG4830|consen 207 ALLYMLSRLYINISQAYLAFFVIDDLQMEQSAKALLPMVAYLSSFSVSMV 256 (412)
T ss_pred HHHHHHHHHHhhhhhhheeeEEeehhhHHHHHhhhhHHHHHHhhhhHHhh
Confidence 88888888888888899999999888888877777666666555544443
No 283
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=95.75 E-value=0.079 Score=50.98 Aligned_cols=103 Identities=5% Similarity=-0.120 Sum_probs=76.3
Q ss_pred ChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHH--HHHHHHHHHHHHhhhhhcccHHHHHHHHHHHhhhhhcchhH
Q 011529 137 NPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLG--FGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPA 214 (483)
Q Consensus 137 s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~ 214 (483)
....-|.+-++..+...++.+..|++-.++.+-.-+. ...++.+...+++...+ +.|...++.++.+.......+.
T Consensus 283 ~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t~--~Iwv~Y~~yIif~~~y~fliTi 360 (412)
T PF01770_consen 283 ESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFTG--NIWVCYAGYIIFRSLYMFLITI 360 (412)
T ss_pred CcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHhh--HHHHHHHHHHHHHHHHHHHHHH
Confidence 3444588888888889999999999966666543333 33444455556666777 8999999999998888888888
Q ss_pred HHHHHhhhcCCcchhHHHHHHHHHHHh
Q 011529 215 MNNILSKWVPVAERSRSLALVYSGMYL 241 (483)
Q Consensus 215 ~~~~~~~~~~~~~r~~~~~~~~~~~~~ 241 (483)
+..-++.....+.-+..+|+......+
T Consensus 361 A~~qIA~~l~~e~yaLVFGiNtf~Al~ 387 (412)
T PF01770_consen 361 ASFQIAKNLSEERYALVFGINTFVALV 387 (412)
T ss_pred HHHHHHHhccccceeeeeeeHHHHHHH
Confidence 888888888777778777776655443
No 284
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=95.65 E-value=0.0036 Score=58.74 Aligned_cols=109 Identities=12% Similarity=0.037 Sum_probs=3.8
Q ss_pred HHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhh---c--------ccHHHHHHHHHHHhhhhhcc
Q 011529 143 LIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAA---K--------LGLPFLLVVRVFMGIGEGVA 211 (483)
Q Consensus 143 ~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~---~--------~~~~~l~~~~~l~G~~~~~~ 211 (483)
.+..++.++..+|..+.++..-+..+++.+.+..+.-.+...++.++. . .+-+..++..++.|+..|-.
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl 265 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYL 265 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchh
Confidence 356678888888888877643221133334444444433332222221 0 14466778889999999999
Q ss_pred hhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHH
Q 011529 212 MPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSP 251 (483)
Q Consensus 212 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 251 (483)
.+....+.++..++++|..+-.+...+..+|..+|..++-
T Consensus 266 ~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~ 305 (309)
T PF01733_consen 266 STLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSF 305 (309)
T ss_dssp -HHHH-----------------------------------
T ss_pred hhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999988888888888888887653
No 285
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=91.95 E-value=2.2 Score=40.26 Aligned_cols=167 Identities=13% Similarity=0.101 Sum_probs=97.2
Q ss_pred HHHHHHHHHHHhhhhhhhHHhhhhhhhhcCC-ChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHH---
Q 011529 106 VVLCFSAFLLCNMDRVNMSIAILPMSAEFNW-NPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSI--- 181 (483)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~--- 181 (483)
.+.+.+++++.....-+.......++.+++- |....+.-..+-.....+..++.|...|+..|+|++....++.-+
T Consensus 29 ~i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlSv~ 108 (503)
T KOG2601|consen 29 VIFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQNLSVI 108 (503)
T ss_pred eehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHHhhccHHHH
Confidence 3446777888888877788777777777654 444455555556666778888999999999999988766554222
Q ss_pred ---HHHHhhhhhc----ccHHHHHHHHHHHhhhhhcc--hhHHHHH--Hhhhc----CCcchhHHH---HHHHHHHHhHH
Q 011529 182 ---ATALTPVAAK----LGLPFLLVVRVFMGIGEGVA--MPAMNNI--LSKWV----PVAERSRSL---ALVYSGMYLGS 243 (483)
Q Consensus 182 ---~~~~~~~~~~----~~~~~l~~~~~l~G~~~~~~--~~~~~~~--~~~~~----~~~~r~~~~---~~~~~~~~~g~ 243 (483)
+.++..+.+. .+.+.+..+.++.-.-.+.. ...+.++ -.||. ..+.+.... +.....-..-.
T Consensus 109 vagglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A~~i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq~tn 188 (503)
T KOG2601|consen 109 VAGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLAGTILIERDWVVVMSEGESPSVLTNMNATIRGIDQSTN 188 (503)
T ss_pred HHHHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHhhheEEecccEEEEecCCCCHHHHhhcchhhhhhhhhhh
Confidence 2222233332 13444444444333221211 1111111 12222 233444333 56666666778
Q ss_pred HHHHhhHHHhhhccCchHHHHHHHHHHHH
Q 011529 244 VTGLAFSPFLIHRFGWPSVFYSFGSLGTV 272 (483)
Q Consensus 244 ~~g~~~~~~l~~~~g~~~~~~~~~~~~~~ 272 (483)
.+.|++.|.++...+-|..-.+.++-.++
T Consensus 189 ~Lapv~tg~Iitfvsl~~~~g~f~~w~~v 217 (503)
T KOG2601|consen 189 LLAPVITGLIITFVSLRASAGTFAAWALV 217 (503)
T ss_pred chhhhhhcccceeechhhhhhhhHHHHHH
Confidence 89999999999887777654444444444
No 286
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=91.44 E-value=2.9 Score=34.54 Aligned_cols=86 Identities=13% Similarity=-0.010 Sum_probs=44.8
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHhhhhhhhhhchhh
Q 011529 362 FCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVRKIMQSIGFLGPAFFLTQLSHVDSPAMAVLCMACSQGTDAFSQSGLY 441 (483)
Q Consensus 362 ~~~~~~~~~~i~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (483)
-.++......+..++.+.+.+++|.| +.+.++.+...+........+ .+.++....+.+...+......-
T Consensus 42 slai~Y~~~~~s~l~~P~iv~~lg~K---------~sm~lg~~~y~~y~~~~~~~~-~~~l~~~s~l~G~~~a~lW~aqg 111 (156)
T PF05978_consen 42 SLAILYGSFAISCLFAPSIVNKLGPK---------WSMILGSLGYAIYIASFFYPN-SYTLYPASALLGFGAALLWTAQG 111 (156)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHhhH---------HHHHHHHHHHHHHHHHHHhhh-HHHHHHHHHHHhhhhHHhhHhhh
Confidence 34455566777888899999999977 344444444443333333333 33334333333333444444444
Q ss_pred hhHhhhcc-Ccceeeee
Q 011529 442 SNHQDIAP-RYSVSIIS 457 (483)
Q Consensus 442 ~~~~~~~~-~~~g~~~g 457 (483)
.++.+... +.+++..+
T Consensus 112 ~ylt~~s~~~~~~~~~~ 128 (156)
T PF05978_consen 112 TYLTSYSTEETIGRNTG 128 (156)
T ss_pred HHHHHcCCHHHHhhHHH
Confidence 44444443 33454444
No 287
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=90.97 E-value=18 Score=36.07 Aligned_cols=76 Identities=17% Similarity=0.121 Sum_probs=59.2
Q ss_pred HHHHHHHhhhhhcchhHHHHHHhhhcC-CcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHH
Q 011529 198 LVVRVFMGIGEGVAMPAMNNILSKWVP-VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVW 273 (483)
Q Consensus 198 ~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~ 273 (483)
.+..++.|+.........-..+.+.+| +++|...+|-.+...++..++..++++.+.+.+||.....+.-++.++.
T Consensus 270 a~~vi~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~~~a~i~Pii~lit 346 (472)
T TIGR00769 270 ALLVIAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWLTAALITPLVMLLT 346 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 334556677777777777788888887 4678999999999888888777777799999999998877766665553
No 288
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=90.22 E-value=0.33 Score=44.33 Aligned_cols=137 Identities=11% Similarity=0.053 Sum_probs=81.7
Q ss_pred HHHHHHHHhhhhhhhHHhhhh-hhhhcCCCh-hhHHHHHHHHHHHHHHHHhhHHHHHhhcCCch---HHH---HHHHHHH
Q 011529 109 CFSAFLLCNMDRVNMSIAILP-MSAEFNWNP-ATVGLIQSSFFWGYLLTQIAGGIWADTVGGKA---VLG---FGVVWWS 180 (483)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~-~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~---~~~---~~~~~~~ 180 (483)
++..++..++.+..+...+-. =.+.+..+. .|.-|....|.+|..+.. =+-|+=+-+ .+. .-.+++.
T Consensus 256 L~~VY~~EY~INQGl~ell~F~c~~g~sls~~sqYRwyqvlYQlGVFiSR-----SS~~~~~~p~l~~LailQ~vNl~ff 330 (409)
T KOG3880|consen 256 LALVYFAEYFINQGLAELLLFPCSHGFSLSKDSQYRWYQVLYQLGVFISR-----SSINLFTMPYLWLLAILQFVNLLFF 330 (409)
T ss_pred HHHHHHHHHHHhhhhHhhEEeccccCCccchhhcchhhheeeeeeEEEEe-----ccceEEechHHHHHHHHHHHHHHHH
Confidence 444455554444433332111 123344433 346677777777654322 111221111 111 1122223
Q ss_pred HHHHHhhhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHH
Q 011529 181 IATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPF 252 (483)
Q Consensus 181 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 252 (483)
+.-....+.+ ++|..++..+.-|+-.|..+....--+.+-.++++|..+++.....-++|..++..++-.
T Consensus 331 ~~~a~~~ftp--si~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalp 400 (409)
T KOG3880|consen 331 LLQAWYWFTP--SIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALP 400 (409)
T ss_pred HHHHHHHhcc--HHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhcc
Confidence 3333445666 888888888888988788888777777777889999999999999999999888777643
No 289
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=89.99 E-value=0.093 Score=49.27 Aligned_cols=21 Identities=19% Similarity=0.202 Sum_probs=0.0
Q ss_pred HHhHHHHHHHHHHHHHHHHHH
Q 011529 361 LFCVLPWLTMAFSANLGGWIA 381 (483)
Q Consensus 361 ~~~~~~~~~~~i~~~~~g~l~ 381 (483)
..+..++++-.+|+.+.++..
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~ 206 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPR 206 (309)
T ss_dssp ---------------------
T ss_pred HHHHHHHHHHHhcchhcceeE
Confidence 456678899999999888753
No 290
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=89.98 E-value=0.8 Score=44.39 Aligned_cols=127 Identities=14% Similarity=-0.000 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhcccHHHHHHHHHHHhhhhhcchhHHHHHHhhh
Q 011529 143 LIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKW 222 (483)
Q Consensus 143 ~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~ 222 (483)
|-..++.+...+.+...-++.||+|-|+.+..+...+.++..+..+.+ +.+....-+-..|+-.+.....-...++..
T Consensus 336 ~GL~ins~~lgi~S~~~~~l~~~~g~r~~y~~~~~~f~~~~~~~gl~~--~~~~~~~~~~~~G~~~~~~~~~p~~l~~~y 413 (498)
T KOG0637|consen 336 LGLMLNSIVLGIYSLLVEKLSRKFGTRKRYWGGVNAFGLATGLAGLVL--NTYVVLSHRSTAGILSSPLLTVPYGALALY 413 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCcceEEeehhHHHHHHHHHHhhhh--hHHHHHHHHhhcceeecchhcccHHHHHHH
Confidence 455677788888999999999999977777766666667766666666 667777777777754444444433333322
Q ss_pred cC-----------------------CcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCc-hHHHHHHHHHHH
Q 011529 223 VP-----------------------VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGW-PSVFYSFGSLGT 271 (483)
Q Consensus 223 ~~-----------------------~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~-~~~~~~~~~~~~ 271 (483)
.- ...+|...|+.+....+..++.....|.+.+.+|- +..-+..++..+
T Consensus 414 ~~~g~~~a~t~~~pf~~~s~~~~~sg~g~G~~~gvln~~I~ipQvivs~~~Gp~~~~~G~~~~~~~~~~a~s~ 486 (498)
T KOG0637|consen 414 AILGIPLAITFSIPFALASIEIGNSGLGQGLDLGVLNCAIVIPQVLVSLGLGPLDQLFGGGNLPAFVSGAVAL 486 (498)
T ss_pred HHhCCccccccccccccccccccCccCCCCceeeeeeeeeeehhheeeccccchhhhcCCcchhHHHHHHHHH
Confidence 11 12236677778888888888888887888877663 333333333333
No 291
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=89.82 E-value=6.5 Score=36.97 Aligned_cols=133 Identities=8% Similarity=0.010 Sum_probs=87.3
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHhhcCCch--HHHHHHHHHHHHHHHhhhhhcccHHHHHHHHHHHhhhhhcchhHHHHHH
Q 011529 142 GLIQSSFFWGYLLTQIAGGIWADTVGGKA--VLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNIL 219 (483)
Q Consensus 142 g~~~~~~~~~~~~~~~~~g~l~dr~g~r~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~ 219 (483)
|..-++..+..+++.+..|.+--++.|.. .+.++.+..+...+.+...+ ++|..+++.++...-.....+.+..-+
T Consensus 274 G~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~--~Iw~~Ya~yvlfr~~y~l~itiA~~~i 351 (433)
T KOG3810|consen 274 GAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQ--HIWVCYAGYVLFRVIYQLTITIATFQI 351 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhccc--ceehhhhhHHHHHhhHhhhhhHHHHHH
Confidence 55666777778888999999977776653 34445555555555555555 899999998888888888888888888
Q ss_pred hhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccC-----------chHHHHHHHHHHHHHHHHHHH
Q 011529 220 SKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG-----------WPSVFYSFGSLGTVWFTVWLS 279 (483)
Q Consensus 220 ~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-----------~~~~~~~~~~~~~~~~~~~~~ 279 (483)
++....|.-|..+|+.....-+-..+ +.-...+.-| +..-|.+.+.+.++.......
T Consensus 352 A~nL~~e~~gLvFGiNTFvAl~lQsi---lT~iVvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~~~~ 419 (433)
T KOG3810|consen 352 ARNLSSELFGLVFGINTFVALILQSI---LTLIVVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGIEYL 419 (433)
T ss_pred HHhhhhhhheeeeehHHHHHHHHHHh---heEEEEcccccCCCcceeEEEEeehHHHHHHHHHHHHHHHHH
Confidence 88887888888888876654433322 2222333211 223456666666665544433
No 292
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=89.68 E-value=3.4 Score=39.75 Aligned_cols=111 Identities=14% Similarity=0.033 Sum_probs=75.2
Q ss_pred hhhHHHHHHH-HHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhh-------cccHHHHHHHHHHHhhhhh
Q 011529 138 PATVGLIQSS-FFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAA-------KLGLPFLLVVRVFMGIGEG 209 (483)
Q Consensus 138 ~~~~g~~~~~-~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~-------~~~~~~l~~~~~l~G~~~~ 209 (483)
....-.+..+ +.+...+|.+.+.++-++-.| . +.+..++-.+..-++.+++ ..+-+++++...+.|+..|
T Consensus 281 ~~y~~~~~~l~fN~~d~vG~~~a~~~~~~~~r-~-l~i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnG 358 (406)
T KOG1479|consen 281 DWYALLLVFLSFNVFDLIGSILAALLTWPDPR-K-LTIPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNG 358 (406)
T ss_pred hhhHHHHHHHHhHHHHHhhhhhhhcccCCCCc-e-ehHHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccc
Confidence 4444555556 888888887777766654333 3 3333333333333332221 1155778888999999999
Q ss_pred cchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhH
Q 011529 210 VAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFS 250 (483)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 250 (483)
-.......+.++..+++++..+-.+.......|...|..++
T Consensus 359 Yltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s 399 (406)
T KOG1479|consen 359 YLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLS 399 (406)
T ss_pred hHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 88888899999999988888887778888888887777665
No 293
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=87.78 E-value=9.5 Score=34.52 Aligned_cols=137 Identities=12% Similarity=0.031 Sum_probs=85.7
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHhhcCCc--hHHHHHHHHHHHHHHHhhh----hhc-ccHHHHHHHHHHHhhhhhcchh
Q 011529 141 VGLIQSSFFWGYLLTQIAGGIWADTVGGK--AVLGFGVVWWSIATALTPV----AAK-LGLPFLLVVRVFMGIGEGVAMP 213 (483)
Q Consensus 141 ~g~~~~~~~~~~~~~~~~~g~l~dr~g~r--~~~~~~~~~~~~~~~~~~~----~~~-~~~~~l~~~~~l~G~~~~~~~~ 213 (483)
-|++++.+++...+++-+..++..|-..| ..+.+..++..+...+..+ ++. .+...-+++..+.-.+.|..+|
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwP 363 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWP 363 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcch
Confidence 58899999999999999998888775543 3455555554444433222 121 1233345556666677789999
Q ss_pred HHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHHHH
Q 011529 214 AMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVW 277 (483)
Q Consensus 214 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~ 277 (483)
....+=.+..|++.|...+.++..=.++-..++-..--.=....+-|..|-++.+...++.+..
T Consensus 364 SimkmRsqyIPEearstimNfFRvPLnifvClvLynlh~~~~p~~tr~mf~icS~~~~~a~i~~ 427 (454)
T KOG4332|consen 364 SIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFGICSAFLFVASILQ 427 (454)
T ss_pred HHHHHHHhhCCHHHHhhhhhheechhhHhhhhhheecccccCccccchhhhhhHHHHHHHHHHH
Confidence 9999999999999999888886655444333221110000011345677777777666654433
No 294
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=86.28 E-value=6.2 Score=39.06 Aligned_cols=65 Identities=15% Similarity=0.171 Sum_probs=51.5
Q ss_pred HHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchH
Q 011529 197 LLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPS 261 (483)
Q Consensus 197 l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~ 261 (483)
+++.-++..+.....+.+..++-+++.+|.-=|+.|.+.+...++|+---..+.-++++.+.++.
T Consensus 408 vI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~fT~~~ 472 (544)
T PF13000_consen 408 VIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDYFTVAT 472 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhhccccc
Confidence 34446677777777888889999999999999999999999999998777666666777665543
No 295
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=85.41 E-value=6.1 Score=41.29 Aligned_cols=51 Identities=18% Similarity=0.135 Sum_probs=40.9
Q ss_pred HHHHHHhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHH-hhc
Q 011529 337 TFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTL-VSK 387 (483)
Q Consensus 337 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~-g~~ 387 (483)
++++...+..|+.+.+|++...+..++..+....-+..+++|++.|++ |++
T Consensus 3 yYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~ 54 (654)
T TIGR00926 3 YYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKF 54 (654)
T ss_pred eeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 455666777888887999999888888888877888888999999986 444
No 296
>PRK03612 spermidine synthase; Provisional
Probab=84.94 E-value=11 Score=38.26 Aligned_cols=57 Identities=14% Similarity=0.104 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHH
Q 011529 327 IVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADT 383 (483)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr 383 (483)
.+..++..++.........-.+...+|.+....+.+.+++.++..+|+.+++++.++
T Consensus 20 ~~~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~ 76 (521)
T PRK03612 20 LAAVFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRD 76 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 333444445555555555556666678888888999999999999999888877643
No 297
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=84.17 E-value=19 Score=32.75 Aligned_cols=52 Identities=19% Similarity=0.188 Sum_probs=38.1
Q ss_pred HHHHHHHHhhHHHHHHHhCCCc--chhhHHhHHHHHHHHHHHHHHHHHHHHHhhc
Q 011529 335 WGTFILLTWMPTYYNQVLHFNL--TESGLFCVLPWLTMAFSANLGGWIADTLVSK 387 (483)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~ 387 (483)
..........+.+..+ .+.+. ...++..+...+...++.++.|++.||.|+|
T Consensus 16 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~ 69 (338)
T COG0477 16 LDLGLLSPALPLLLST-LSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRR 69 (338)
T ss_pred HhcchHHHHHHHHHHH-cCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccch
Confidence 3334444556666666 44444 4678888888889999999999999999877
No 298
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=83.16 E-value=19 Score=32.39 Aligned_cols=49 Identities=4% Similarity=-0.307 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHh----CCCcchhhHHhHHHHHHHHHHH
Q 011529 326 LIVSHFCHNWGTFILLTWMPTYYNQVL----HFNLTESGLFCVLPWLTMAFSA 374 (483)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~i~~ 374 (483)
+.+...+.....++....=..|++++. +-+.....++++-+....+...
T Consensus 183 vG~~LAv~aGvlyGs~fvPv~Yi~~~~~~y~~as~~~ldYvFs~f~GIfltSt 235 (254)
T PF07857_consen 183 VGIILAVFAGVLYGSNFVPVIYIQDHPDIYPGASQNGLDYVFSHFSGIFLTST 235 (254)
T ss_pred HhHHHHHHHHHHHhcccchHHHHHhCccccCCCCCcchheeHHHHhhHHHHHH
Confidence 344444445555555544455666642 3344444445544433333333
No 299
>PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [].; GO: 0046873 metal ion transmembrane transporter activity, 0030001 metal ion transport, 0055085 transmembrane transport, 0016020 membrane
Probab=81.33 E-value=43 Score=31.33 Aligned_cols=30 Identities=13% Similarity=0.175 Sum_probs=14.1
Q ss_pred HHHHHHHHhhhhhcc-hhHHHHHHhhhcCCc
Q 011529 197 LLVVRVFMGIGEGVA-MPAMNNILSKWVPVA 226 (483)
Q Consensus 197 l~~~~~l~G~~~~~~-~~~~~~~~~~~~~~~ 226 (483)
-.+...+.+++.|.. +....-++.+....+
T Consensus 263 ~~~~~~~~a~aaG~~lyv~~~ell~~~~~~~ 293 (317)
T PF02535_consen 263 DIVSGILLAFAAGTFLYVAFVELLPEEFHNK 293 (317)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 344455556655544 333334555555433
No 300
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=79.55 E-value=73 Score=32.10 Aligned_cols=79 Identities=15% Similarity=0.139 Sum_probs=58.1
Q ss_pred HHHHHHHHhhhhhcchhHHHHHHhhhcCC-cchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHH
Q 011529 197 LLVVRVFMGIGEGVAMPAMNNILSKWVPV-AERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFT 275 (483)
Q Consensus 197 l~~~~~l~G~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~ 275 (483)
+.+.-+..|+.........-..+.+.+|+ +++...+|-++...++-.++-..+++.+.+.+||+....+.-++.++..+
T Consensus 285 Ia~lvi~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~GW~~~AlitPiv~lit~~ 364 (491)
T PF03219_consen 285 IALLVIAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWRTAALITPIVILITGL 364 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhHHHHHHHHH
Confidence 33445566777777777777888888874 56677888888877777777778889999999999887776555554443
No 301
>PRK00293 dipZ thiol:disulfide interchange protein precursor; Provisional
Probab=78.24 E-value=88 Score=32.31 Aligned_cols=31 Identities=26% Similarity=0.185 Sum_probs=19.5
Q ss_pred CcchhhHHhHHHHHHHHHHHHHHHHHHHHHh
Q 011529 355 NLTESGLFCVLPWLTMAFSANLGGWIADTLV 385 (483)
Q Consensus 355 ~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g 385 (483)
+....++.+..++++..+--++.+....|+-
T Consensus 323 ~~~~g~~~l~~~gLG~~~Plll~~~~~~~~l 353 (571)
T PRK00293 323 DLLLGGLTLYLLALGMGLPLILITTFGNKLL 353 (571)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 4555566677777777666666666555543
No 302
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=77.86 E-value=74 Score=32.42 Aligned_cols=26 Identities=15% Similarity=0.107 Sum_probs=14.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcC
Q 011529 363 CVLPWLTMAFSANLGGWIADTLVSKG 388 (483)
Q Consensus 363 ~~~~~~~~~i~~~~~g~l~dr~g~~~ 388 (483)
...+.+.+.++..+++++-..++.++
T Consensus 303 i~~y~~~~~iaGy~S~~~yk~~~g~~ 328 (521)
T PF02990_consen 303 IILYALTSFIAGYVSARLYKSFGGKK 328 (521)
T ss_pred HHHHHHHhhHHHHHHHHHHHHcCCCc
Confidence 33444555555556666666665543
No 303
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=77.22 E-value=16 Score=32.88 Aligned_cols=104 Identities=17% Similarity=0.256 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHhh-cCCchHHH----HHHHHHHHHHHHhh-hhhc--ccHHHHHHHHHHHhhhhhcchh
Q 011529 142 GLIQSSFFWGYLLTQIAGGIWADT-VGGKAVLG----FGVVWWSIATALTP-VAAK--LGLPFLLVVRVFMGIGEGVAMP 213 (483)
Q Consensus 142 g~~~~~~~~~~~~~~~~~g~l~dr-~g~r~~~~----~~~~~~~~~~~~~~-~~~~--~~~~~l~~~~~l~G~~~~~~~~ 213 (483)
....-++..+..++.+..|.+... +.||+.+. .+.++..+..++.. .... .+...+++.-++.|++.=+..+
T Consensus 144 ~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~ 223 (267)
T PF07672_consen 144 PIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQG 223 (267)
T ss_pred HHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhH
Confidence 344455666666777777888764 45555443 22333333333321 1111 1356677788888877654444
Q ss_pred HHHHHHhhhcC---CcchhHHHHHHHHHHHhHHHHH
Q 011529 214 AMNNILSKWVP---VAERSRSLALVYSGMYLGSVTG 246 (483)
Q Consensus 214 ~~~~~~~~~~~---~~~r~~~~~~~~~~~~~g~~~g 246 (483)
... .+++-++ |++-|..+|+.-..+.+...+.
T Consensus 224 ViL-~lPhEyK~~~pk~ig~~Fg~iWGfGY~~yTi~ 258 (267)
T PF07672_consen 224 VIL-NLPHEYKGYNPKKIGIQFGLIWGFGYIFYTIY 258 (267)
T ss_pred HHh-cChhhhcCCCcceehhHHHHHHHHHHHHHHHH
Confidence 433 2333332 4445555555444444443333
No 304
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=76.37 E-value=13 Score=28.05 Aligned_cols=31 Identities=23% Similarity=0.037 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHhhHHHHHhhc-CCchHHHHHH
Q 011529 146 SSFFWGYLLTQIAGGIWADTV-GGKAVLGFGV 176 (483)
Q Consensus 146 ~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~ 176 (483)
+.-.+...+.....||+.||| |-+++.++.+
T Consensus 49 ssefIsGilVGa~iG~llD~~agTsPwglIv~ 80 (116)
T COG5336 49 SSEFISGILVGAGIGWLLDKFAGTSPWGLIVF 80 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHH
Confidence 344556666777889999997 4455443333
No 305
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=76.28 E-value=72 Score=30.30 Aligned_cols=150 Identities=20% Similarity=0.161 Sum_probs=84.9
Q ss_pred hhhhhh-cCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCc-hH---HHHHHHHHHHHHHHh-hhhh--cccHHHHHH
Q 011529 128 LPMSAE-FNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGK-AV---LGFGVVWWSIATALT-PVAA--KLGLPFLLV 199 (483)
Q Consensus 128 ~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r-~~---~~~~~~~~~~~~~~~-~~~~--~~~~~~l~~ 199 (483)
..+... .|-+--|.+.+.+.+.....+++...-++.|.--.- .+ ++++++.-.-..++. .|+. ..+-+.+++
T Consensus 31 ~tLatyLlG~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~ 110 (508)
T COG4262 31 GTLATYLLGGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYA 110 (508)
T ss_pred HHHHHHhcCCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHH
Confidence 333433 355677889999999999999888888877743322 22 122222211111111 2222 114577888
Q ss_pred HHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhh-hccCchHHHHHHHHHHHHHHHHHH
Q 011529 200 VRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLI-HRFGWPSVFYSFGSLGTVWFTVWL 278 (483)
Q Consensus 200 ~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~g~~~~~~~~~~~~~~~~~~~~ 278 (483)
.-+++|.-.|...|..+.++.+.. ++.....+.....-.+|...+.++-.++. ...|.--.-...+.+-+++.++.+
T Consensus 111 lt~vIG~LVG~EiPL~mrml~~r~--a~~k~~~s~vl~~DYLGal~~gLl~p~lllP~LGl~rta~laG~~Nl~aAvv~~ 188 (508)
T COG4262 111 LTAVIGVLVGAEIPLLMRMLQRRQ--AKAKDLGSRVLTLDYLGALAGGLLWPFLLLPRLGLVRTAALAGLCNLAAAVVTL 188 (508)
T ss_pred HHHHHHHHHhcchHHHHHHHHHHH--HHHHhhhhhhhhhHhhhhhhHHHHHHHHHhhhhccHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999998887732 22222233333446777777766655543 345532233334555555444433
Q ss_pred H
Q 011529 279 S 279 (483)
Q Consensus 279 ~ 279 (483)
+
T Consensus 189 f 189 (508)
T COG4262 189 F 189 (508)
T ss_pred H
Confidence 3
No 306
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=75.32 E-value=55 Score=28.51 Aligned_cols=43 Identities=23% Similarity=0.279 Sum_probs=25.0
Q ss_pred cchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHHHHHH
Q 011529 226 AERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSL 269 (483)
Q Consensus 226 ~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~ 269 (483)
+++.+.-.......-++..+|..+++.+.+..+.. ..++.+++
T Consensus 158 ~~~~~~~~~~~~~~i~~f~~Ga~~ga~l~~~~~~~-al~~~~~~ 200 (209)
T PF06912_consen 158 KDRALRRALRYLLIILSFFIGAILGALLYRRLGFW-ALLLPALL 200 (209)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH-HHHHHHHH
Confidence 33334444556666667777777777777777743 33433333
No 307
>PRK10263 DNA translocase FtsK; Provisional
Probab=72.90 E-value=44 Score=37.53 Aligned_cols=22 Identities=23% Similarity=0.104 Sum_probs=11.4
Q ss_pred hHHHHHHhhHHHhhhccCchHH
Q 011529 241 LGSVTGLAFSPFLIHRFGWPSV 262 (483)
Q Consensus 241 ~g~~~g~~~~~~l~~~~g~~~~ 262 (483)
.|+++|..+..++...+|....
T Consensus 142 gGGIIG~lLs~lL~~LfG~vGa 163 (1355)
T PRK10263 142 SGGVIGSLLSTTLQPLLHSSGG 163 (1355)
T ss_pred ccchHHHHHHHHHHHHHhHHHH
Confidence 3555555555555555554333
No 308
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=68.23 E-value=13 Score=28.09 Aligned_cols=52 Identities=15% Similarity=0.139 Sum_probs=42.9
Q ss_pred hhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhh
Q 011529 139 ATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAA 190 (483)
Q Consensus 139 ~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~ 190 (483)
...|-+.+.|.-.+++.++++++..|+..+.+.=.++..+..++..+..+.+
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~P 105 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAP 105 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecC
Confidence 5568889999999999999999999999888887777777777776655543
No 309
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=68.16 E-value=1e+02 Score=28.56 Aligned_cols=155 Identities=12% Similarity=0.054 Sum_probs=74.7
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhh---cCCchHHHHHHH
Q 011529 101 KRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADT---VGGKAVLGFGVV 177 (483)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr---~g~r~~~~~~~~ 177 (483)
|+.+..+.+...+++.-+..+...-.+..+.+..+......++..+.... .+..+-.++ ||.+|.=+++.+
T Consensus 22 r~l~~~~~L~~~f~~iE~i~g~~s~SlaLLADa~Hml~D~~al~lal~A~------~~a~r~~~~~~TfGy~R~eiLaa~ 95 (296)
T COG1230 22 RRLLIALLLNLAFMLIEIIGGLLTGSLALLADALHMLSDALALLLALIAI------KLARRPATKRFTFGYKRLEILAAF 95 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHhHHHHHHHHHHHHHHHHHH------HHhcCCCCCCCCccHhHHHHHHHH
Confidence 34444444555555555555555555666777777655555554444332 222233333 677777666555
Q ss_pred HHHHHHHHhhhh-----------hcc-cHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHH
Q 011529 178 WWSIATALTPVA-----------AKL-GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVT 245 (483)
Q Consensus 178 ~~~~~~~~~~~~-----------~~~-~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~ 245 (483)
..++..+..++. +.. +. ..++.-.+.|+.... .+.-.+.+- ..+....--++.....-.-+-+
T Consensus 96 ~nav~Li~~s~~I~~EAi~R~~~P~~i~~-~~ml~va~~GL~vN~---~~a~ll~~~-~~~~lN~r~a~LHvl~D~Lgsv 170 (296)
T COG1230 96 LNALLLIVVSLLILWEAIQRLLAPPPIHY-SGMLVVAIIGLVVNL---VSALLLHKG-HEENLNMRGAYLHVLGDALGSV 170 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCc-cchHHHHHHHHHHHH---HHHHHhhCC-CcccchHHHHHHHHHHHHHHHH
Confidence 555544433221 100 11 122222233333221 111112221 2234445555666655555566
Q ss_pred HHhhHHHhhhccCchHHHHHH
Q 011529 246 GLAFSPFLIHRFGWPSVFYSF 266 (483)
Q Consensus 246 g~~~~~~l~~~~g~~~~~~~~ 266 (483)
|.++++.+...++|.|.=-+.
T Consensus 171 ~vIia~i~i~~~~w~~~Dpi~ 191 (296)
T COG1230 171 GVIIAAIVIRFTGWSWLDPIL 191 (296)
T ss_pred HHHHHHHHHHHhCCCccchHH
Confidence 667777777778888754333
No 310
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=67.16 E-value=60 Score=30.87 Aligned_cols=32 Identities=9% Similarity=-0.065 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHH
Q 011529 142 GLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFG 175 (483)
Q Consensus 142 g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~ 175 (483)
.++.+...+.....+.+.+ .||+.-.|++...
T Consensus 189 TilSStSs~FtL~la~if~--~e~ft~sKllav~ 220 (416)
T KOG2765|consen 189 TILSSTSSFFTLFLAAIFP--VERFTLSKLLAVF 220 (416)
T ss_pred hhhhhcchHHHHHHHHHcC--cchhhHHHHHHHH
Confidence 3444444444444444444 8999888876443
No 311
>TIGR00844 c_cpa1 na(+)/h(+) antiporter. This model is specific for the fungal members of this family.
Probab=66.38 E-value=1.9e+02 Score=31.02 Aligned_cols=37 Identities=16% Similarity=0.170 Sum_probs=20.3
Q ss_pred HHHHHHHhHHHHHHhhHHHhhhccCchHHHHHHHHHH
Q 011529 234 LVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLG 270 (483)
Q Consensus 234 ~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~ 270 (483)
+......++.++..+++-+++..++|..++++.++++
T Consensus 105 Ll~~~M~lT~livAL~a~~Li~GL~~~~ALLLGAILA 141 (810)
T TIGR00844 105 LLVPVMTSGWLVIALFVWILVPGLNFPASLLMGACIT 141 (810)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhhc
Confidence 3334444555555555544544567777776666554
No 312
>PF05255 UPF0220: Uncharacterised protein family (UPF0220); InterPro: IPR007919 This family of proteins is functionally uncharacterised.
Probab=66.22 E-value=54 Score=27.39 Aligned_cols=59 Identities=12% Similarity=0.075 Sum_probs=35.1
Q ss_pred hcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhcc------CchHHHHHHHHHHHHHHHHHHHh
Q 011529 222 WVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF------GWPSVFYSFGSLGTVWFTVWLSK 280 (483)
Q Consensus 222 ~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~------g~~~~~~~~~~~~~~~~~~~~~~ 280 (483)
.++.+++.+..+.+-++.-.+...--.+-+.+.... .+...+++.++++.+.+++.-..
T Consensus 14 ~~~~~~~~~~~~~~~AGaLF~~gwWi~iDa~v~s~~~~~~~~~~~f~~~ipgI~stlgm~mvN~V 78 (166)
T PF05255_consen 14 WFDWSEKRNAIGSYVAGALFALGWWIFIDAAVYSKHANGSDVHVTFVDWIPGIFSTLGMFMVNSV 78 (166)
T ss_pred CCCchHhHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCCCCccccceeeehHHHHHHHHHHhccc
Confidence 344455556666655555555554455555555433 46777888888887776655433
No 313
>KOG3814 consensus Signaling protein van gogh/strabismus [Signal transduction mechanisms]
Probab=65.17 E-value=1.3e+02 Score=28.63 Aligned_cols=12 Identities=17% Similarity=0.357 Sum_probs=9.6
Q ss_pred cHHHHHHHHHHH
Q 011529 193 GLPFLLVVRVFM 204 (483)
Q Consensus 193 ~~~~l~~~~~l~ 204 (483)
.+|.+++.|++.
T Consensus 204 ayWLFYiVri~~ 215 (531)
T KOG3814|consen 204 AYWLFYIVRILD 215 (531)
T ss_pred HHHHHHhhhhhc
Confidence 688888888765
No 314
>PRK02237 hypothetical protein; Provisional
Probab=64.13 E-value=22 Score=26.95 Aligned_cols=52 Identities=15% Similarity=0.018 Sum_probs=42.1
Q ss_pred hhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhh
Q 011529 139 ATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAA 190 (483)
Q Consensus 139 ~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~ 190 (483)
+..|-+.+.|.-.+++.++++++..|+..+.+.=.++..+..++..+..+.+
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p 107 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP 107 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence 4478899999999999999999999999888777777777777766554443
No 315
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=63.54 E-value=2.6e+02 Score=31.59 Aligned_cols=37 Identities=8% Similarity=0.030 Sum_probs=23.3
Q ss_pred CChhHHHHHHHHHHHHHHhhhhhhhHHhhhhhhhhcC
Q 011529 99 FPKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFN 135 (483)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 135 (483)
.+..|..+++-.++.++.+...-.++..+....+.|-
T Consensus 659 ~~pe~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~ 695 (1228)
T KOG0055|consen 659 NKPEWPYLLLGSLGAAIRGATYPLFAYVFSQVLEAFY 695 (1228)
T ss_pred ccchhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHh
Confidence 3446777777777777777766666666655555443
No 316
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=61.89 E-value=1.3e+02 Score=31.00 Aligned_cols=64 Identities=14% Similarity=0.149 Sum_probs=57.2
Q ss_pred cHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhc
Q 011529 193 GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR 256 (483)
Q Consensus 193 ~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 256 (483)
+.++++--.++.|++.........=+.-+-+|++-|..+++++.....+|..+..++.......
T Consensus 457 Si~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sMkS~~~al~l~t~a~G~~lss~Lv~~v~~~ 520 (571)
T KOG1237|consen 457 SILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESMKSVATALWLLTVAVGNYLSSVLVSLVQFS 520 (571)
T ss_pred eHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6788888899999999999988888899999999999999999999999999999888766543
No 317
>PF03596 Cad: Cadmium resistance transporter; InterPro: IPR004676 These proteins are members of the Cadmium Resistance (CadD) Family. To date, this family of proteins has only been found in Gram-positive bacteria. The CadD family includes two close orthologues in two Staphylococcus species that have been reported to function in cadmium resistance, and another staphylococcal protein that has been reported to possibly function in quaternary ammonium ion export.
Probab=59.40 E-value=1.2e+02 Score=26.16 Aligned_cols=30 Identities=7% Similarity=-0.141 Sum_probs=14.1
Q ss_pred HhhHHHhhhccCchHHHHHHHHHHHHHHHH
Q 011529 247 LAFSPFLIHRFGWPSVFYSFGSLGTVWFTV 276 (483)
Q Consensus 247 ~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~ 276 (483)
+++++.......-.|.....+.+.+...+-
T Consensus 43 Sl~~~~~l~~ip~~wiLGlLGliPI~lGi~ 72 (191)
T PF03596_consen 43 SLLGAFGLLFIPPEWILGLLGLIPIYLGIK 72 (191)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 444444444444445544555555554443
No 318
>PF03706 UPF0104: Uncharacterised protein family (UPF0104); InterPro: IPR022791 This family of proteins are integral membrane proteins. These proteins are uncharacterised but contain a conserved PG motif. Some members of this family are annotated as dolichol-P-glucose synthetase and contain a PF00535 from PFAM domain. This entry also contains proteins of unknown function that are involved in the addition of lysine to phosphatidylglycerol (lysylphosphatidylglycerol synthetase, L-PG synthase). L-PG synthase produces lysyl-phosphatidylglycerol (L-PG), the major component of the bacterial membrane and responsible for its positive charge. L-PG synthesis contributes to bacterial virulence as it is involved in the cationic antimicrobial peptides (CAMP) resistance mechanism of the host's immune system (defensins, cathelicidins) and of the competing microorganisms (bacteriocins).
Probab=58.28 E-value=1.5e+02 Score=27.16 Aligned_cols=51 Identities=16% Similarity=0.047 Sum_probs=34.8
Q ss_pred CCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHH
Q 011529 135 NWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATAL 185 (483)
Q Consensus 135 g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 185 (483)
+.+...+.....+..+...+-..-+-.+.++.|.|..+.-+.-...++...
T Consensus 23 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 73 (294)
T PF03706_consen 23 SANPWWLLLALLLSLLSYVLRALRWRLLLRRLGHRISFRDALRISFIGFFL 73 (294)
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHH
Confidence 556666777777777777777888888888887766655555544444443
No 319
>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger.
Probab=57.12 E-value=62 Score=34.97 Aligned_cols=49 Identities=10% Similarity=0.053 Sum_probs=30.0
Q ss_pred hHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHH
Q 011529 123 MSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLG 173 (483)
Q Consensus 123 ~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~ 173 (483)
+......+...+|++...+|+.+... +..+.-++....+-|-|.-.+.+
T Consensus 952 lV~~at~IG~vlGIse~VmGlTfLA~--GTSIPDlisSvivArkG~gdMAV 1000 (1096)
T TIGR00927 952 MVWWAHQVGETIGISEEIMGLTILAA--GTSIPDLITSVIVARKGLGDMAV 1000 (1096)
T ss_pred HHHHHHHhhhhcCCChhhhhhhhhhh--hcccHHHHHHHHHHHccCCccee
Confidence 33445557777888888877654433 55556666666666666555433
No 320
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=56.83 E-value=73 Score=30.81 Aligned_cols=135 Identities=13% Similarity=-0.006 Sum_probs=82.2
Q ss_pred hhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHH--HH----HHHHHHHHHHhhhhhc--------
Q 011529 126 AILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLG--FG----VVWWSIATALTPVAAK-------- 191 (483)
Q Consensus 126 ~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~--~~----~~~~~~~~~~~~~~~~-------- 191 (483)
..+.-.-|.|++..+.+++.....-..++.....|.+.. |+|++.. -+ .+...+..++....+.
T Consensus 287 ~t~LkLle~Gv~ke~Lal~~v~~~plqI~l~~~~gk~ta--~~~pl~~~lka~~~R~~~~~~~t~Lv~~~~~~~~~~G~~ 364 (510)
T KOG3574|consen 287 LTSLKLLEHGVPKEELALIAVPLVPLQIALPLYIGKWTA--GPRPLNVFLKAVPYRLGGGLVQTALVWWTPTLGHSDGTF 364 (510)
T ss_pred ccchHHHHcCCChhHheeeeeehhhHHHhhhhhheeecC--CCCcchHHHHhhhHHHHHHHHHHHHHhhhcccccCCCce
Confidence 344556688999999887763333333344444444433 2222211 11 1111112222211110
Q ss_pred -ccHHH-HHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHH
Q 011529 192 -LGLPF-LLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSV 262 (483)
Q Consensus 192 -~~~~~-l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~ 262 (483)
..+.. .+....+.+...-..+...++..+++.+|.--|+.+.+.+...++|.-.-..+..++.+.++|+..
T Consensus 365 ~~~~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~ltv~~C 437 (510)
T KOG3574|consen 365 PRGYYILLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADGLTVKQC 437 (510)
T ss_pred eechHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcccCceeec
Confidence 01222 233356666666777788899999999999999999999999999998888888888888777654
No 321
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=51.34 E-value=48 Score=27.15 Aligned_cols=50 Identities=24% Similarity=0.174 Sum_probs=32.8
Q ss_pred cHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHH
Q 011529 193 GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVT 245 (483)
Q Consensus 193 ~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~ 245 (483)
++..+++..++.|+|. ..+.+.+++...++++-|..+|+-.+-.+++-+.
T Consensus 96 ~~~~~~~S~~~Fg~gl---lGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 96 PWAVLLVSLVFFGLGL---LGISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred chHHHHHHHHHHHHHH---HhhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 3444555555555443 3455666777777888899999988888776554
No 322
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=47.10 E-value=45 Score=30.12 Aligned_cols=139 Identities=10% Similarity=0.114 Sum_probs=72.0
Q ss_pred HHHHHHHHHHHHhhhhhhhHHhhhh-hhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHH-hhcCCchHHHHHHHHHHHH
Q 011529 105 IVVLCFSAFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWA-DTVGGKAVLGFGVVWWSIA 182 (483)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~-dr~g~r~~~~~~~~~~~~~ 182 (483)
...-+.+.+.+.-...+.-...++. +.++++.......++-.+..+.....+.+-.-+- ++...|...-.|.++...+
T Consensus 202 ~~YQiAllYmLsRL~iNiSQaYlaFfviddlqm~qsakAllP~v~Yl~SF~VS~v~~eipwngkrlKayYsaGgiiwifc 281 (412)
T KOG4830|consen 202 QFYQIALLYMLSRLYINISQAYLAFFVIDDLQMEQSAKALLPMVAYLSSFSVSMVNSEIPWNGKRLKAYYSAGGIIWIFC 281 (412)
T ss_pred HHHHHHHHHHHHHHHhhhhhhheeeEEeehhhHHHHHhhhhHHHHHHhhhhHHhhcccCCcCcceeeeeeecccHHHHHh
Confidence 3334444455554444444455555 5667777777777776666665554443322111 1122233344555555554
Q ss_pred HHHhhhhhcccHH-HHHHHHHHHhhhhhcchhHHHHHHhhhcCCc--chhHHHHHHHHHHHhHHH
Q 011529 183 TALTPVAAKLGLP-FLLVVRVFMGIGEGVAMPAMNNILSKWVPVA--ERSRSLALVYSGMYLGSV 244 (483)
Q Consensus 183 ~~~~~~~~~~~~~-~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~--~r~~~~~~~~~~~~~g~~ 244 (483)
...+.+.+. ++- ..++..++.|++.+.......++.++...++ .++...|-.+..--+...
T Consensus 282 ga~ilLlpr-~i~symyAisvfIGIAnAimlvtslsitavli~~~~~~~aFv~GamSF~DKlS~G 345 (412)
T KOG4830|consen 282 GAVILLLPR-GIKSYMYAISVFIGIANAIMLVTSLSITAVLINKNTESGAFVYGAMSFFDKLSNG 345 (412)
T ss_pred hhheeeccc-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCceEEEehHHHHHhhccc
Confidence 444433332 332 3455567789988887777766666666433 333334444444444333
No 323
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=46.01 E-value=2.6e+02 Score=27.73 Aligned_cols=121 Identities=12% Similarity=0.051 Sum_probs=69.9
Q ss_pred HHHHHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHH
Q 011529 106 VVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATAL 185 (483)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 185 (483)
...+.+.+++..+......|.+ +...+|++.++...+.+.-.+...++.++--....+.|-|-....+.-...++-..
T Consensus 18 ~~~lglQH~lamfg~~V~VPli--vg~a~~l~~~~~~~Lis~~l~~~GiaTllq~~~~~~~g~~lP~~lG~sFafi~p~i 95 (451)
T COG2233 18 LLLLGLQHLLAMFGATVLVPLL--VGLALGLSAEDTAYLISADLLASGIGTLLQLLGTGPGGSGLPSYLGSSFAFVAPMI 95 (451)
T ss_pred HHHHHHHHHHHHHhcchHhhHH--hccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCcccCCCeeEechHHHHHHHH
Confidence 4455666666655544443322 56789999999999999999999998888766444455455544444444444333
Q ss_pred hhhhhc-ccHHHHHHHHHHHhhhhhcchhHHHHHHhhhcCCcch
Q 011529 186 TPVAAK-LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAER 228 (483)
Q Consensus 186 ~~~~~~-~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r 228 (483)
...... ......+.+.+..|+..-...+.....+.+.+||---
T Consensus 96 ~~~~~~g~~~~~~~G~ii~ag~~~~li~~~~~~~l~rlfPPvVt 139 (451)
T COG2233 96 AIGGTTGDGIAALLGGIIAAGLVYFLISPIVKIRLARLFPPVVT 139 (451)
T ss_pred HHHhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCceE
Confidence 222210 1355555555555555443333322267777776543
No 324
>PF03741 TerC: Integral membrane protein TerC family; InterPro: IPR005496 A family containining a number of integral membrane proteins is named after TerC protein. TerC has been implicated in resistance to tellurium, and may be involved in efflux of tellurium ions. The tellurite-resistant Escherichia coli strain KL53 was found during testing of a group of clinical isolates for antibiotic and heavy metal ion resistance []. The determinant of the strain's tellurite resistance was located on a large conjugative plasmid, and analyses showed the genes terB, terC, terD and terE were essential for conservation of this resistance. Members of this family contain a number of conserved aspartates which may be involved in metal ion binding.; GO: 0016021 integral to membrane
Probab=45.69 E-value=1.9e+02 Score=24.64 Aligned_cols=59 Identities=12% Similarity=0.205 Sum_probs=32.9
Q ss_pred hcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHHHHHH
Q 011529 209 GVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSL 269 (483)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~ 269 (483)
+.-+....+.+.+..|+++|.++.-+--.+..+--.+.-.++.++.+. |++..++.|+.
T Consensus 11 s~DN~~vi~~~~~~lp~~~r~kal~~Gi~~A~~lR~~~i~~~~~ll~~--~~~i~~igG~~ 69 (183)
T PF03741_consen 11 SIDNAFVIAMIFRKLPPEQRRKALFWGIIGAIVLRIIFIFLASWLLSI--FPWILLIGGLF 69 (183)
T ss_pred HhhHHHHHHHHHhCCCHHHhhhhHHHhHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHH
Confidence 445666777788889887776655443333333344444555666654 24444444443
No 325
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=44.51 E-value=1.6e+02 Score=28.48 Aligned_cols=73 Identities=12% Similarity=0.078 Sum_probs=44.2
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcCCchh
Q 011529 320 KPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVT 392 (483)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~~~~~ 392 (483)
++..+.+.+.+++..++--...+....|+.+-.|-+....+..-.+-+...++-..+.|...|+..|+|....
T Consensus 26 s~~~i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~ 98 (503)
T KOG2601|consen 26 SSTVIFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQT 98 (503)
T ss_pred cceeehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHH
Confidence 3334455666777777776777777778877555444444444444445555555666777788887765443
No 326
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=42.20 E-value=1.8e+02 Score=26.79 Aligned_cols=16 Identities=13% Similarity=-0.077 Sum_probs=7.1
Q ss_pred cHHHHHHHHHHHhhhh
Q 011529 193 GLPFLLVVRVFMGIGE 208 (483)
Q Consensus 193 ~~~~l~~~~~l~G~~~ 208 (483)
+.|.+.+..++.+++.
T Consensus 22 ~~~l~~~~~~~~~F~~ 37 (284)
T PF12805_consen 22 YPWLLILVLALLTFFF 37 (284)
T ss_pred ccHHHHHHHHHHHHHH
Confidence 3444444444444443
No 327
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=40.85 E-value=96 Score=26.41 Aligned_cols=23 Identities=13% Similarity=0.494 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHhhHHHHHhhcCC
Q 011529 146 SSFFWGYLLTQIAGGIWADTVGG 168 (483)
Q Consensus 146 ~~~~~~~~~~~~~~g~l~dr~g~ 168 (483)
.-|.+++.+...+.|++.||..+
T Consensus 89 gGyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 89 GGYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhc
Confidence 45778888999999999999885
No 328
>KOG1307 consensus K+-dependent Ca2+/Na+ exchanger NCKX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=39.01 E-value=2.8e+02 Score=27.38 Aligned_cols=46 Identities=11% Similarity=0.047 Sum_probs=27.9
Q ss_pred hHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCch
Q 011529 123 MSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKA 170 (483)
Q Consensus 123 ~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~ 170 (483)
+..+...+-+.+|++..-.|+.. .+.|..+--++...+.-|-|.--
T Consensus 443 MVWwa~~iGeT~gIp~eIMGLTi--LAAGTSIPDlitSvIVARKGlGD 488 (588)
T KOG1307|consen 443 MVWWANIIGETLGIPDEIMGLTI--LAAGTSIPDLITSVIVARKGLGD 488 (588)
T ss_pred HHHHHHHcccccCCCHHHhhhhh--hhcCCchHHhhHhhhhccccccc
Confidence 33445557778888888877643 33344455566666666666443
No 329
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=38.57 E-value=4.3e+02 Score=26.64 Aligned_cols=83 Identities=12% Similarity=0.038 Sum_probs=61.2
Q ss_pred HHHHHHHHHhhhhhcchhHHHHHHhhhcCC-cchhHHHHHHHHHHHhH-HHHHHhhHHHhhhccCchHHHHHHHHHHHHH
Q 011529 196 FLLVVRVFMGIGEGVAMPAMNNILSKWVPV-AERSRSLALVYSGMYLG-SVTGLAFSPFLIHRFGWPSVFYSFGSLGTVW 273 (483)
Q Consensus 196 ~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~g-~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~ 273 (483)
.+.+..+..|++........-+-+.+.+|. +++...+|-++...++- .++.-.+++-+++..||-+.-.+.-++.++.
T Consensus 286 ~ial~vl~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~GW~~~AlitPiv~lit 365 (509)
T COG3202 286 AIALLVLAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVGWFTGALITPLVMLIT 365 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHH
Confidence 344555667777777777778888888874 55788888888888877 6666778888999999988777766666665
Q ss_pred HHHHH
Q 011529 274 FTVWL 278 (483)
Q Consensus 274 ~~~~~ 278 (483)
.++++
T Consensus 366 g~lFF 370 (509)
T COG3202 366 GVLFF 370 (509)
T ss_pred HHHHH
Confidence 44443
No 330
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=38.51 E-value=3e+02 Score=29.32 Aligned_cols=53 Identities=17% Similarity=0.047 Sum_probs=31.0
Q ss_pred HhhHHHHHhhc----CCchHHHHHHHHHHHHHHHhhhhhcccHHHHHHHHHHHhhhhh
Q 011529 156 QIAGGIWADTV----GGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEG 209 (483)
Q Consensus 156 ~~~~g~l~dr~----g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~ 209 (483)
+.+.+-+.|.= ||.+-++++.++++++.+...+... ..|.+....++.+++.+
T Consensus 40 G~ia~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll~~-~p~~~~~~l~~~tf~~~ 96 (701)
T TIGR01667 40 GIIAAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLLFP-KPWLFPFLLTLLTFGFI 96 (701)
T ss_pred hhHhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhc-chHHHHHHHHHHHHHHH
Confidence 34445566643 4456677777777777776655442 34555555555555544
No 331
>COG1457 CodB Purine-cytosine permease and related proteins [Nucleotide transport and metabolism]
Probab=37.64 E-value=4.2e+02 Score=26.29 Aligned_cols=147 Identities=8% Similarity=-0.164 Sum_probs=73.9
Q ss_pred hhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhc-cCchHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCChhhHHH
Q 011529 220 SKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR-FGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKL 298 (483)
Q Consensus 220 ~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (483)
.|..|+++|-........+.+.-..++....|.+... .++++..+...+-.++..+.....-..-++..-+. .
T Consensus 11 ~~~vp~~~r~~~~~~~~vWfga~~~ias~~~G~ll~~~L~~~~si~aillG~llG~i~~A~~s~~Ga~~Glpq--m---- 84 (442)
T COG1457 11 IEPVPEESRKGWLNLFLVWFGANFTIASMVTGGLLVPGLSFGQSLLAILLGNLLGGIFMAYFSYQGARTGLPQ--M---- 84 (442)
T ss_pred CCCCChhhhhcchhHHHHHHHhHhHHHHHHHhccccccccHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCh--h----
Confidence 4556777775454665556555555555555554433 56665555444333333333222211111111000 0
Q ss_pred hhhcccCCCCCcccchhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHH
Q 011529 299 IVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGG 378 (483)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g 378 (483)
...|..+-++.-+...+...+...+.++++.++.-.... .. +.....+...+.++.+.+..+++-
T Consensus 85 -------------i~sR~~fG~~Gs~l~sll~~~~~iGW~~v~~~l~~~a~~-~~-~~~~~~~~ili~g~l~~l~~ifG~ 149 (442)
T COG1457 85 -------------ILSRYPFGVKGSILPSLLNGITLIGWFGVNVILSGIAIG-SG-TGLPVWAGILIIGVLMTLVTIFGY 149 (442)
T ss_pred -------------eeecccccchhHHHHHHHHHHHHhhHHHHHHHHhccccc-cC-CCCcHHHHHHHHHHHHHHHHHHhH
Confidence 001122333334455555666667777777666544321 12 333445555566677777788888
Q ss_pred HHHHHHhhc
Q 011529 379 WIADTLVSK 387 (483)
Q Consensus 379 ~l~dr~g~~ 387 (483)
+...++.|-
T Consensus 150 r~l~~l~~~ 158 (442)
T COG1457 150 RALHKLERI 158 (442)
T ss_pred HHHHHHHHH
Confidence 888877644
No 332
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=37.52 E-value=32 Score=30.22 Aligned_cols=114 Identities=25% Similarity=0.246 Sum_probs=66.0
Q ss_pred hhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCc-----h---HHHHHHHHHHHHHHHh-hhhhcccHHHHHHHH
Q 011529 131 SAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGK-----A---VLGFGVVWWSIATALT-PVAAKLGLPFLLVVR 201 (483)
Q Consensus 131 ~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r-----~---~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~ 201 (483)
.--+|+....+|-..++.- .+=.+.+.||||-+ - +++++.++-.+..-++ .+....++..-....
T Consensus 105 AllLGlkREaIGat~SI~R------Ep~laiI~ekYGldSpEgrGVl~~Yi~GTvfGtiffsllas~~a~~~~fhP~ALA 178 (241)
T PF11299_consen 105 ALLLGLKREAIGATFSIGR------EPNLAIISEKYGLDSPEGRGVLGVYIIGTVFGTIFFSLLASLLASLGIFHPYALA 178 (241)
T ss_pred HHHhcccHHhhcceeeccc------CcceeeeehhcCCCCccccceEEEeeehhhHHHHHHHHHHHHHHhccCCCHHHHH
Confidence 3456666666665544322 34456678888742 2 2344443333322221 111111222334556
Q ss_pred HHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHH
Q 011529 202 VFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSP 251 (483)
Q Consensus 202 ~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 251 (483)
.-.|+|.+....++..-+.+.+| +......++....+.+..+.|-.+.-
T Consensus 179 MasGvGSgSMMaAa~~aL~~~~P-~~a~~i~A~AaaSNllt~~~G~Y~~i 227 (241)
T PF11299_consen 179 MASGVGSGSMMAAASGALAAAYP-EMADQILAFAAASNLLTSVTGLYMSI 227 (241)
T ss_pred HHcCCcHHHHHHHHHHHHHHHCc-chHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67899999999999888889995 66667777777766666666655443
No 333
>COG2119 Predicted membrane protein [Function unknown]
Probab=37.30 E-value=2.6e+02 Score=23.79 Aligned_cols=76 Identities=16% Similarity=0.232 Sum_probs=42.4
Q ss_pred HHHHHHHHHHH-HhhhhhhhHHhhhhhhhhcCCChh-hHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHH
Q 011529 105 IVVLCFSAFLL-CNMDRVNMSIAILPMSAEFNWNPA-TVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIA 182 (483)
Q Consensus 105 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~s~~-~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 182 (483)
.+...+...|+ ...|.+.+... .+..+.+.... .+|. .....++..++-..+.++++|+..|.+-.++.+++.+.
T Consensus 101 ~f~~tfi~~FlaE~GDKTQiATI--aLaA~~~~~~~V~~Gt-~lg~~l~s~laVl~G~~ia~ki~~r~l~~~aallFl~f 177 (190)
T COG2119 101 VFVTTFITFFLAELGDKTQIATI--ALAADYHSPWAVFAGT-TLGMILASVLAVLLGKLIAGKLPERLLRFIAALLFLIF 177 (190)
T ss_pred HHHHHHHHHHHHHhccHHHHHHH--HHhhcCCCceeeehhh-HHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHH
Confidence 34434444443 34444444332 24455554222 2222 23345566677788889999999999877776665544
Q ss_pred H
Q 011529 183 T 183 (483)
Q Consensus 183 ~ 183 (483)
.
T Consensus 178 a 178 (190)
T COG2119 178 A 178 (190)
T ss_pred H
Confidence 3
No 334
>COG1288 Predicted membrane protein [Function unknown]
Probab=37.23 E-value=4.2e+02 Score=26.15 Aligned_cols=213 Identities=12% Similarity=0.031 Sum_probs=0.0
Q ss_pred cccccCCCCChhhHhhhhhccccccCCCCCccCCCcccccCChhHHHHHHHHHHHHHHhhhhhhhHHhhhhhhhhcCCCh
Q 011529 59 SESYNVSEKSVKFEEALKDIALRSEDLGVDSESLVPWWEEFPKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNP 138 (483)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~ 138 (483)
++..++++.+...+++++..+.-..+.+. ..+...+++.++.+..+.+...-++....+.+.|.+...|=.=.
T Consensus 239 ~KvkkdP~~S~v~~~~~e~r~~f~~~~~~-------~~~Ft~~~klvL~lf~l~f~~mI~GV~~~GW~f~eiA~~Fl~mg 311 (481)
T COG1288 239 SKVKKDPTLSLVYEDDEEFRETFKVEDSG-------ERPFTFRDKLVLLLFTLTFVIMIWGVIVLGWWFPEIAAQFLAMG 311 (481)
T ss_pred HHHhcCccccccccchHHHHHHhhhcccc-------ccccchhhhHHHHHHHHHHHHHHHHhhhhceehHHHHHHHHHHH
Q ss_pred hhHHHHHH------HHHHHHHHHHhhHHHHHhhcCC------chHHHHHHHHHHHHHHHhhhhhcccHHHHHHHHHHHhh
Q 011529 139 ATVGLIQS------SFFWGYLLTQIAGGIWADTVGG------KAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGI 206 (483)
Q Consensus 139 ~~~g~~~~------~~~~~~~~~~~~~g~l~dr~g~------r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~ 206 (483)
--++++.. ...+......++.+.+.=-+-| ..-++.-.++.....++..+....-.+..++...+.++
T Consensus 312 Iiig~I~glse~~~~~sF~~Ga~~lv~~aLiiGiARgI~lim~~g~i~dTiL~~~~~~lsgls~~~f~i~mli~~~~l~f 391 (481)
T COG1288 312 IIIGLIGGLSENDIASSFIEGASDLLGVALIIGLARGINLIMDDGMILDTILNYLASLLSGLSSAVFAIGMLIFQALLNF 391 (481)
T ss_pred HHHHHHhccchhHHHHHHHHhHHHHHHHHHHHHhhhceEEEecCcchHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHheE
Q ss_pred ------hhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhh------ccC--chHHHHHHHHHHHH
Q 011529 207 ------GEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH------RFG--WPSVFYSFGSLGTV 272 (483)
Q Consensus 207 ------~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~------~~g--~~~~~~~~~~~~~~ 272 (483)
|.+...-...+=++|.. .-.|..+.--++.+.++-..+.|--+-.+.. .++ |++..-..++..++
T Consensus 392 ~VpS~SG~A~ltMPImAPLaD~v-gv~RqvvV~Afq~g~G~~n~I~PTSg~~ma~La~~~i~y~~W~Kfv~pl~~i~~li 470 (481)
T COG1288 392 FVPSGSGLAVLTMPIMAPLADLV-GVPRQVVVLAFQLGDGFSNIIAPTSGLLMATLAMARVPYGTWLKFVAPLLGILFLI 470 (481)
T ss_pred EEeCCCchhHhhchhhhhhHHhc-CCCHHHhhhhhhhcchhhheecCchHHHHHHHHHccCChhHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHH
Q 011529 273 WFTVWLS 279 (483)
Q Consensus 273 ~~~~~~~ 279 (483)
..++...
T Consensus 471 ~~~~lii 477 (481)
T COG1288 471 SSVVLII 477 (481)
T ss_pred HHHHHHh
No 335
>PRK10599 calcium/sodium:proton antiporter; Provisional
Probab=37.15 E-value=3.8e+02 Score=25.81 Aligned_cols=27 Identities=11% Similarity=0.067 Sum_probs=21.2
Q ss_pred hhhhHHhhhhhhhhcCCChhhHHHHHH
Q 011529 120 RVNMSIAILPMSAEFNWNPATVGLIQS 146 (483)
Q Consensus 120 ~~~~~~~~~~~~~~~g~s~~~~g~~~~ 146 (483)
.-.+...+....+++|+++.-+|.+..
T Consensus 238 Ae~lv~sIe~~v~~~Glp~afiGvIIa 264 (366)
T PRK10599 238 TKMNASPLETLLTSMNAPVAFTGFLVA 264 (366)
T ss_pred HHHhHhhHHHHHHhcCCCHHHHHHHHH
Confidence 444566678888999999999998763
No 336
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=36.65 E-value=3.5e+02 Score=28.82 Aligned_cols=52 Identities=17% Similarity=0.043 Sum_probs=29.6
Q ss_pred hhHHHHHhhc----CCchHHHHHHHHHHHHHHHhhhhhcccHHHHHHHHHHHhhhhh
Q 011529 157 IAGGIWADTV----GGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEG 209 (483)
Q Consensus 157 ~~~g~l~dr~----g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~ 209 (483)
.+.+.++|.= ||.+-++++.+++.++.+...+... ..|.+....++.+++.+
T Consensus 41 ~ia~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~-~p~lf~~~l~~~tf~~~ 96 (704)
T TIGR01666 41 IIAAALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFG-KPWLFAVGLTVSTFGFI 96 (704)
T ss_pred HHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHH
Confidence 3345566643 4555567777777777666554441 44555555555555543
No 337
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=36.24 E-value=1.7e+02 Score=23.99 Aligned_cols=26 Identities=15% Similarity=0.403 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHhhHHHHHhhcCCch
Q 011529 145 QSSFFWGYLLTQIAGGIWADTVGGKA 170 (483)
Q Consensus 145 ~~~~~~~~~~~~~~~g~l~dr~g~r~ 170 (483)
..-|.++..+...+.|++.+|..+++
T Consensus 59 TgGyl~gf~~~a~i~g~~~~~~~~~~ 84 (148)
T PF02632_consen 59 TGGYLLGFPLAALIIGLLAERLKRSR 84 (148)
T ss_pred CChHHHHHHHHHHHHHHHHHhccccc
Confidence 34677888899999999999988764
No 338
>PRK10263 DNA translocase FtsK; Provisional
Probab=35.86 E-value=5.1e+02 Score=29.71 Aligned_cols=21 Identities=14% Similarity=-0.092 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhc
Q 011529 367 WLTMAFSANLGGWIADTLVSK 387 (483)
Q Consensus 367 ~~~~~i~~~~~g~l~dr~g~~ 387 (483)
..|+++|.++...+...+|..
T Consensus 141 ~gGGIIG~lLs~lL~~LfG~v 161 (1355)
T PRK10263 141 ASGGVIGSLLSTTLQPLLHSS 161 (1355)
T ss_pred cccchHHHHHHHHHHHHHhHH
Confidence 458888888888888877754
No 339
>KOG1278 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=34.28 E-value=1.4e+02 Score=30.20 Aligned_cols=31 Identities=16% Similarity=0.320 Sum_probs=18.3
Q ss_pred CCcchhhHHhHHHHHHHHHHHHHHHHHHHHH
Q 011529 354 FNLTESGLFCVLPWLTMAFSANLGGWIADTL 384 (483)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~ 384 (483)
+++..-|.+.+...+..++..+++|+.+.|+
T Consensus 356 lSPs~RGsLmT~~~~l~v~~G~~agY~s~rl 386 (628)
T KOG1278|consen 356 LSPSSRGSLMTAMVLLFVFMGFVAGYVSARL 386 (628)
T ss_pred CCccccccHHHHHHHHHHHHHHhhhhhhhhh
Confidence 4666666666665555555666666655554
No 340
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=34.11 E-value=50 Score=24.80 Aligned_cols=53 Identities=15% Similarity=0.037 Sum_probs=40.5
Q ss_pred ChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhh
Q 011529 137 NPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVA 189 (483)
Q Consensus 137 s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 189 (483)
+....|-..+.+.-.+++.++.+++..|+..+.+.=.++..+..++..++.+.
T Consensus 53 ~~~a~GRvYAAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~ 105 (109)
T COG1742 53 PAAAFGRVYAAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFG 105 (109)
T ss_pred CchhhhhHHHHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeC
Confidence 34556778888999999999999999999888777667766666665554443
No 341
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=33.60 E-value=54 Score=30.85 Aligned_cols=75 Identities=17% Similarity=0.236 Sum_probs=53.0
Q ss_pred CChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhh-hh-cccHHHHHHHHHHHhhhhhc
Q 011529 136 WNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPV-AA-KLGLPFLLVVRVFMGIGEGV 210 (483)
Q Consensus 136 ~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~-~~-~~~~~~l~~~~~l~G~~~~~ 210 (483)
+.-..+|..+.++.++..+.+.+.|.+..++||-.....+.+.-..-.....+ .+ ..+.+.+.+.-.+.|++.+.
T Consensus 307 ~Gv~~igf~m~cfgv~~Av~S~~~g~L~~~~gr~~~~v~gavv~l~li~~~~~w~~~~~~~~i~y~~aalwgv~d~v 383 (390)
T KOG3097|consen 307 LGVSRIGFAMACFGVGDAVASSLFGLLGKWIGRPPLLVLGAVVHLLLITILFFWAPNPQDSWIFYVAAALWGVGDAV 383 (390)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHHHHHhcccCCCCceEEEeehhhcCccHHH
Confidence 44567899999999999999999999999999999888777665433322222 11 11455666666677766543
No 342
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=33.18 E-value=2.2e+02 Score=21.72 Aligned_cols=51 Identities=20% Similarity=0.151 Sum_probs=28.6
Q ss_pred cchhHHHHHHHHHHHhHHHHHHhhHHHhhhcc-C-chHHHHHHHHHHHHHHHH
Q 011529 226 AERSRSLALVYSGMYLGSVTGLAFSPFLIHRF-G-WPSVFYSFGSLGTVWFTV 276 (483)
Q Consensus 226 ~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-g-~~~~~~~~~~~~~~~~~~ 276 (483)
+.++.+.++--..-.+++++-....||+.+++ | -.|-+++..++.+++.++
T Consensus 38 s~k~~~~a~klssefIsGilVGa~iG~llD~~agTsPwglIv~lllGf~AG~l 90 (116)
T COG5336 38 SIKGYAQAFKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLLLGFGAGVL 90 (116)
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHH
Confidence 45677777766666666666566667777764 2 233344444444444433
No 343
>PF13073 DUF3937: Protein of unknown function (DUF3937)
Probab=33.11 E-value=1.1e+02 Score=20.53 Aligned_cols=38 Identities=8% Similarity=0.100 Sum_probs=27.0
Q ss_pred hcChhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCC
Q 011529 318 LSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFN 355 (483)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 355 (483)
++|+......+..+.+.........++..|++...|..
T Consensus 2 f~nkklir~gltlfv~L~vi~FtigYfq~Yl~saagi~ 39 (73)
T PF13073_consen 2 FTNKKLIRFGLTLFVFLSVIDFTIGYFQTYLESAAGIK 39 (73)
T ss_pred CccchhhhhhhHHHHHHHHHHhhHHHHHHHHHhccCCe
Confidence 56777777777777666666667778888888765544
No 344
>cd02434 Nodulin-21_like_3 Nodulin-21 and CCC1-related protein family. Nodulin-21_like_3: This is a family of proteins closely related to nodulin-21, a plant nodule-specific protein that may be involved in symbiotic nitrogen fixation. This family is also related to CCC1, a yeast vacuole transmembrane protein that functions as an iron and manganese transporter.
Probab=32.77 E-value=3.5e+02 Score=23.94 Aligned_cols=24 Identities=21% Similarity=0.209 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHHHHHhhcCCchhH
Q 011529 370 MAFSANLGGWIADTLVSKGLSVTT 393 (483)
Q Consensus 370 ~~i~~~~~g~l~dr~g~~~~~~~~ 393 (483)
..+.-++.|.+.-|+..++.....
T Consensus 180 ~~~~L~~~G~~~~~~~~~~~~~~~ 203 (225)
T cd02434 180 VAFTLFLLGSFKSKLYNGKWIISG 203 (225)
T ss_pred HHHHHHHHHHHHHHhcCCchHHHH
Confidence 556666778888888766554333
No 345
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=31.63 E-value=1.5e+02 Score=19.24 Aligned_cols=35 Identities=17% Similarity=0.169 Sum_probs=20.8
Q ss_pred HHHHHHHHHHhhHHHHHhh-cCCchHHHHHHHHHHH
Q 011529 147 SFFWGYLLTQIAGGIWADT-VGGKAVLGFGVVWWSI 181 (483)
Q Consensus 147 ~~~~~~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~ 181 (483)
...+...+.....|+..|+ ++.++...+..++.++
T Consensus 8 ~~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~llG~ 43 (55)
T PF09527_consen 8 FTMAAPILVGFFLGYWLDKWFGTSPWFTLIGLLLGI 43 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 4455556667778888886 5665655444444433
No 346
>COG0387 ChaA Ca2+/H+ antiporter [Inorganic ion transport and metabolism]
Probab=31.55 E-value=4.8e+02 Score=25.08 Aligned_cols=31 Identities=19% Similarity=0.158 Sum_probs=21.1
Q ss_pred HhhhhhhhHHhhhhhhhhcCCChhhHHHHHH
Q 011529 116 CNMDRVNMSIAILPMSAEFNWNPATVGLIQS 146 (483)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~ 146 (483)
..+..-.....+....+++|.++.-.|.+..
T Consensus 233 v~~lae~lv~~le~~l~~~g~~~~F~G~iIa 263 (368)
T COG0387 233 VALLAEILVGSLEAVLESLGAPPAFVGLIIA 263 (368)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 3333344555677788999999988887644
No 347
>COG3619 Predicted membrane protein [Function unknown]
Probab=31.15 E-value=3.8e+02 Score=23.80 Aligned_cols=29 Identities=24% Similarity=0.345 Sum_probs=16.8
Q ss_pred HHHHHHHHHHhHHHHHHhhHHHhhhccCc
Q 011529 231 SLALVYSGMYLGSVTGLAFSPFLIHRFGW 259 (483)
Q Consensus 231 ~~~~~~~~~~~g~~~g~~~~~~l~~~~g~ 259 (483)
.-...+...-++.++|...++.+...+|-
T Consensus 169 ~~~~~~~~~il~f~~GAi~g~ll~~~~g~ 197 (226)
T COG3619 169 RDWLIYLSLILSFIVGAICGALLTLFFGL 197 (226)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 33445555556666666666666655543
No 348
>PF02554 CstA: Carbon starvation protein CstA; InterPro: IPR003706 Escherichia coli induces the synthesis of at least 30 proteins at the onset of carbon starvation, two-thirds of which are positively regulated by the cyclic AMP (cAMP) and cAMP receptor protein (CRP) complex. This family consists of carbon starvation protein CstA a predicted membrane protein. It has been suggested that CstA is involved in peptide utilization [].; GO: 0009267 cellular response to starvation, 0016020 membrane
Probab=29.78 E-value=5.2e+02 Score=24.94 Aligned_cols=31 Identities=19% Similarity=0.324 Sum_probs=19.0
Q ss_pred cchhHHHHH-HHHHHHhHHHHHHhhHHHhhhccCch
Q 011529 226 AERSRSLAL-VYSGMYLGSVTGLAFSPFLIHRFGWP 260 (483)
Q Consensus 226 ~~r~~~~~~-~~~~~~~g~~~g~~~~~~l~~~~g~~ 260 (483)
.+|-..++. +....+.|.++||.++ ..+||-
T Consensus 52 ~~~~vlfghhf~sIAGaGPI~GPi~a----a~~Gwl 83 (376)
T PF02554_consen 52 TNKWVLFGHHFASIAGAGPIVGPILA----AQFGWL 83 (376)
T ss_pred CchHHhhHHHHHHHhccccchHHHHH----HHhcch
Confidence 445566666 4455556667777665 457886
No 349
>COG3559 TnrB3 Putative exporter of polyketide antibiotics [Cell envelope biogenesis, outer membrane]
Probab=29.22 E-value=5.7e+02 Score=25.22 Aligned_cols=60 Identities=10% Similarity=0.042 Sum_probs=30.8
Q ss_pred hcChhHHHHHHHHHHHHHHHHHHHHhhHHHHHHH----------hCCCcchhhHHhHHHHHHHHHHHHHH
Q 011529 318 LSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQV----------LHFNLTESGLFCVLPWLTMAFSANLG 377 (483)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~g~~~~~~~~~~~~~~~~~~i~~~~~ 377 (483)
+.+..++...+..++....+..+.--+-.++.+. .+....+.+.+...+.+.+++.....
T Consensus 295 L~Rg~lI~W~v~~fllglvygs~fg~l~~fL~~n~avrqave~~e~ag~le~~Flv~lfsIisil~a~~~ 364 (536)
T COG3559 295 LNRGSLILWTVGLFLLGLVYGSVFGGLGDFLGDNTAVRQAVERMEGAGALEQAFLVLLFSIISILAAAFA 364 (536)
T ss_pred eccCccHHHHHHHHHHHHHHHHHhhhhhhhhcCcHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455555556666666666665555444444331 13333444555555555555544443
No 350
>TIGR03644 marine_trans_1 probable ammonium transporter, marine subtype. Members of this protein family are well conserved subclass of putative ammonimum transporters, belonging to the much broader set of ammonium/methylammonium transporter described by TIGR00836. Species with this transporter tend to be marine bacteria. Partial phylogenetic profiling (PPP) picks a member of this protein family as the single best-scoring protein vs. a reference profile for the marine environment Genome Property for a large number of different query genomes. This finding by PPP suggests that this transporter family represents an important adaptation to the marine environment.
Probab=28.15 E-value=5.8e+02 Score=25.02 Aligned_cols=30 Identities=3% Similarity=-0.015 Sum_probs=19.6
Q ss_pred hhcCCcchhHHHHHHHHHHHhHHHHHHhhH
Q 011529 221 KWVPVAERSRSLALVYSGMYLGSVTGLAFS 250 (483)
Q Consensus 221 ~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 250 (483)
+..+-++---+.++....+..|.++.+++.
T Consensus 315 ~~~~iDD~~~~~~vHg~~Gi~G~i~~glf~ 344 (404)
T TIGR03644 315 DKLKIDDPVGAISVHGVAGIWGTLVVPITN 344 (404)
T ss_pred HhCCCCCCcCchHhhhHHHHHHHHHHHHhc
Confidence 445455555677777777777777666654
No 351
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=27.88 E-value=2.7e+02 Score=21.03 Aligned_cols=19 Identities=16% Similarity=0.321 Sum_probs=9.3
Q ss_pred HhHHHHHHhhHHHhhhccC
Q 011529 240 YLGSVTGLAFSPFLIHRFG 258 (483)
Q Consensus 240 ~~g~~~g~~~~~~l~~~~g 258 (483)
.+..++|..++-++-++++
T Consensus 53 v~pil~G~~lG~WLD~~~~ 71 (100)
T TIGR02230 53 AIPTLLGVAVGIWLDRHYP 71 (100)
T ss_pred HHHHHHHHHHHHHHHhhcC
Confidence 3344444455555555555
No 352
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=27.75 E-value=5.6e+02 Score=24.69 Aligned_cols=33 Identities=15% Similarity=0.180 Sum_probs=21.1
Q ss_pred HHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHH
Q 011529 350 QVLHFNLTESGLFCVLPWLTMAFSANLGGWIAD 382 (483)
Q Consensus 350 ~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~d 382 (483)
.-.|-+..+.+.+.+.+-.++-+|+.+.-++.|
T Consensus 36 yLlG~~Ilq~S~Iia~yl~amGlGs~~sry~~d 68 (508)
T COG4262 36 YLLGGGILQTSLIIAGYLAAMGLGSLLSRYVLD 68 (508)
T ss_pred HhcCCceeehHHHHHHHHHHhchhhhhhccccC
Confidence 335666777777777776666666666555444
No 353
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=27.15 E-value=2.8e+02 Score=20.96 Aligned_cols=30 Identities=20% Similarity=0.257 Sum_probs=15.6
Q ss_pred HHHHHhhHHHHHhh-cCCchHHHHHHHHHHH
Q 011529 152 YLLTQIAGGIWADT-VGGKAVLGFGVVWWSI 181 (483)
Q Consensus 152 ~~~~~~~~g~l~dr-~g~r~~~~~~~~~~~~ 181 (483)
..+.+.+.|...|+ ++-++.+.+.+++.++
T Consensus 55 pil~G~~lG~WLD~~~~t~~~~tl~~lllGv 85 (100)
T TIGR02230 55 PTLLGVAVGIWLDRHYPSPFSWTLTMLIVGV 85 (100)
T ss_pred HHHHHHHHHHHHHhhcCCCcHHHHHHHHHHH
Confidence 33455566667775 5655544444444433
No 354
>PF09605 Trep_Strep: Hypothetical bacterial integral membrane protein (Trep_Strep); InterPro: IPR011733 This family consists of strongly hydrophobic proteins about 190 amino acids in length with a strongly basic motif near the C terminus. If is found in rather few species, but in paralogous families of 12 members in the oral pathogenic spirochaete Treponema denticola and 2 in Streptococcus pneumoniae (strain ATCC BAA-255 / R6).
Probab=27.14 E-value=4e+02 Score=22.76 Aligned_cols=56 Identities=13% Similarity=-0.050 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHhhHHHHHhhcCCchHHHHHHHHHHHHHHHhhhhhcccHHHHHHHHHHHhh
Q 011529 146 SSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGI 206 (483)
Q Consensus 146 ~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~ 206 (483)
....+...+..++.-.+..|.++|..+.+..++.++...+.+ +.|...+..++.|+
T Consensus 35 ~~~~i~ali~g~vyml~~~KV~K~G~~~i~~~i~gl~~~~~G-----~~~~~~~~~iv~gl 90 (186)
T PF09605_consen 35 FMPAIAALICGIVYMLMVAKVPKRGAFLIMGIIMGLIFFLMG-----HGWPMLIVCIVGGL 90 (186)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHh-----hhHHHHHHHHHHHH
Confidence 345566677888888899999999988777777666554432 23444444444443
No 355
>PRK11017 codB cytosine permease; Provisional
Probab=27.02 E-value=6e+02 Score=24.83 Aligned_cols=53 Identities=11% Similarity=0.039 Sum_probs=26.9
Q ss_pred hhcCCcchhHHHHHHHHHHHhHHHHHHhhHH-HhhhccCchHHHHHHHHHHHHH
Q 011529 221 KWVPVAERSRSLALVYSGMYLGSVTGLAFSP-FLIHRFGWPSVFYSFGSLGTVW 273 (483)
Q Consensus 221 ~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~-~l~~~~g~~~~~~~~~~~~~~~ 273 (483)
|-.|++||.............+........+ .+....+++.......+-.++.
T Consensus 2 ~pvp~~~r~~~~~~~~~~~g~~~~~~~~~~g~~l~~GLs~~~ai~aiilG~~i~ 55 (404)
T PRK11017 2 SPVPQSARKGVLSLTMVMLGFTFFSASMWAGGTLGTGLSFVDFLLAVLIGNLLL 55 (404)
T ss_pred CCCCHHHhcchHhHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence 3456777765555444444444444444443 3334466666665544444433
No 356
>TIGR00836 amt ammonium transporter. The mechanism of energy coupling, if any, to methyl-NH2 or NH3 uptake by the AmtB protein of E. coli is not entirely clear. NH4+ uniport driven by the pmf, energy independent NH3 facilitation, and NH4+/K+ antiport have been proposed as possible transport mechanisms. In Corynebacterium glutamicum and Arabidopsis thaliana, uptake via the Amt1 homologues of AmtB has been reported to be driven by the pmf.
Probab=26.72 E-value=6.2e+02 Score=24.84 Aligned_cols=48 Identities=19% Similarity=0.196 Sum_probs=27.7
Q ss_pred HHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhH
Q 011529 203 FMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFS 250 (483)
Q Consensus 203 l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 250 (483)
+.|+..+........++.+..+-++---+.++....+.+|.++.++++
T Consensus 284 viG~iag~~~~~~~~~l~~~~~iDD~~~~~~vHg~~Gi~G~i~~glfa 331 (403)
T TIGR00836 284 IIGLVAGVLCYLAVSKLKKKLKIDDPLDAFAVHGVGGIWGLIATGLFA 331 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCcccchhhhhhHHHHHHHHHHhc
Confidence 334333333334444455555555555577788777777777776654
No 357
>PF05232 BTP: Bacterial Transmembrane Pair family; InterPro: IPR007896 This domain represents a conserved pair of transmembrane helices. It appears to be found as two tandem repeats in a family of hypothetical proteins.
Probab=25.94 E-value=2.3e+02 Score=19.52 Aligned_cols=48 Identities=6% Similarity=-0.040 Sum_probs=38.7
Q ss_pred hhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCc
Q 011529 122 NMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGK 169 (483)
Q Consensus 122 ~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r 169 (483)
.+....|.+.--+|.+..+.+.+.....+...+=..+..++-||+-+|
T Consensus 17 ~l~~~~P~~a~~~~~~~~~a~~l~v~~s~~a~~wn~ifN~~FD~~~~r 64 (67)
T PF05232_consen 17 ALLISVPLIAWWLGISLWQAGALDVGLSLFAMVWNYIFNWLFDKIEPR 64 (67)
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 344456667777888999999988888888889999999999997554
No 358
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=25.67 E-value=6.1e+02 Score=24.39 Aligned_cols=259 Identities=11% Similarity=-0.017 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhhHHHHHhhcCC----------chHHHHHHHHHHHHHHHhhhhhcccHHHHHHHHHHHhhhhhcchhHH
Q 011529 146 SSFFWGYLLTQIAGGIWADTVGG----------KAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAM 215 (483)
Q Consensus 146 ~~~~~~~~~~~~~~g~l~dr~g~----------r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~ 215 (483)
.+..+...+.....|++..|+|- |-++-+.+-+.....+.-.... +...-+....+..+.........
T Consensus 2 v~~~i~~i~~ii~~G~~~~~~~~l~~~~~~~ls~lv~~~~lP~liF~~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 79 (385)
T PF03547_consen 2 VFSAILPIFLIILLGYLLGRFGILDPEASKGLSKLVFNVFLPALIFSSIANTDTL--EDLLSLWFIPVFAFIIFILGLLL 79 (385)
T ss_pred cHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccch--hhhhhhHHHHHHHHHHHHHHHHH
Q ss_pred HHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCchHHHHHHHHHHHHHHHHHHHhccCCCCCCCCCChhh
Q 011529 216 NNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAE 295 (483)
Q Consensus 216 ~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (483)
.......+..+++-+..-.......=...+|-.+...+....+............++...+.........++.+..++..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~N~~~lglpi~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~l~~~~~~~~~~~~~~~ 159 (385)
T PF03547_consen 80 GFLLSRLFRLPKEWRGVFVLAASFGNTGFLGLPILQALFGERGVAYAIIFDVVNNIILWSLGYFLLESRSEKEDKSEEEP 159 (385)
T ss_pred HHHHHHhcCCCcccceEEEecccCCcchhhHHHHHHHHhcchhhhhehHHHHhhHHHHHHHHHHhhcccccccccccccc
Q ss_pred HHHhhhcccCCCCCc------------------------------------------------------------ccchh
Q 011529 296 KKLIVSSCASKEPVK------------------------------------------------------------TIPWG 315 (483)
Q Consensus 296 ~~~~~~~~~~~~~~~------------------------------------------------------------~~~~~ 315 (483)
++.........++.. ...++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (385)
T PF03547_consen 160 SSAESIDSEQEDSDEMSLDGSSPSSTEEEIDEDGSPSSTPSQSSASAPSSVSTSPSPSNSTGAEQKSSNSTRKKLKKSIL 239 (385)
T ss_pred cccccccccccCCccccCCcccccccccccccCCcccccccccccccchhhccCCcccccchhhhhhhhhHHHHHHHHHH
Q ss_pred hhhcChhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcchhhHHhHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHH
Q 011529 316 LILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVLHFNLTESGLFCVLPWLTMAFSANLGGWIADTLVSKGLSVTTVR 395 (483)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~~~~~~~~ 395 (483)
..+++|.++...+...+......-- ...|.++.+ .....|-......+..+-+.+..+....+.+.+........
T Consensus 240 ~~~~nP~~~a~~lgli~~~~~~~~~-~~~~~~i~~----~~~~lg~~~~pl~l~~lG~~l~~~~~~~~~~~~~~~~~~~~ 314 (385)
T PF03547_consen 240 KLFKNPPLIAIILGLIIGLIPPLRP-LFFPSFITD----SLSYLGAAAVPLALFVLGASLARGPRKSALGWKPSIIAVLV 314 (385)
T ss_pred HHHhCcHHHHHHHHHHHHHHHHhcc-cchHhHHHH----HHHHHHhhhHHHHHHHHHHHHhcCCcccchhhHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHH
Q 011529 396 KIMQSIGFLGPAFFLT 411 (483)
Q Consensus 396 ~~~~~~~~~~~~~~~~ 411 (483)
+.++.-.+.......+
T Consensus 315 rlii~P~i~~~~~~~~ 330 (385)
T PF03547_consen 315 RLIILPLIGIGIVFLL 330 (385)
T ss_pred HHHHHHHHHHHHHHHH
No 359
>PRK14199 camphor resistance protein CrcB; Provisional
Probab=25.54 E-value=3.4e+02 Score=21.50 Aligned_cols=12 Identities=0% Similarity=0.122 Sum_probs=5.8
Q ss_pred hhHHHHHHhhhc
Q 011529 212 MPAMNNILSKWV 223 (483)
Q Consensus 212 ~~~~~~~~~~~~ 223 (483)
.+...++..|..
T Consensus 80 fTTFSTf~~E~~ 91 (128)
T PRK14199 80 LTTFSTFSYETI 91 (128)
T ss_pred cccHHHHHHHHH
Confidence 344445555544
No 360
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=25.43 E-value=3.9e+02 Score=22.04 Aligned_cols=32 Identities=28% Similarity=0.331 Sum_probs=24.6
Q ss_pred hhhHHHHHHHHHHHHHHHHhhHHHHHhhcCCc
Q 011529 138 PATVGLIQSSFFWGYLLTQIAGGIWADTVGGK 169 (483)
Q Consensus 138 ~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r 169 (483)
+..+.++.+...++..+..+-.|.|+-.+...
T Consensus 95 P~~~~~~~S~~~Fg~gllGisYGilSaSWD~~ 126 (153)
T PF11947_consen 95 PPWAVLLVSLVFFGLGLLGISYGILSASWDPE 126 (153)
T ss_pred CchHHHHHHHHHHHHHHHhhhhhhcccccCCC
Confidence 34566777777788888889999999888654
No 361
>KOG1277 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=25.15 E-value=1.9e+02 Score=28.48 Aligned_cols=20 Identities=15% Similarity=0.152 Sum_probs=9.3
Q ss_pred HHHHHHHHHHHHHHHHhhcC
Q 011529 369 TMAFSANLGGWIADTLVSKG 388 (483)
Q Consensus 369 ~~~i~~~~~g~l~dr~g~~~ 388 (483)
..-+....+|-+-.|.|.|+
T Consensus 339 Ts~i~GY~~gs~Y~r~gG~~ 358 (593)
T KOG1277|consen 339 TSPINGYVSGSFYARLGGRR 358 (593)
T ss_pred cccccccccceeeehhccHH
Confidence 33333344444445666553
No 362
>PF01914 MarC: MarC family integral membrane protein; InterPro: IPR002771 Members of this family are integral membrane proteins that includes the antibiotic resistance protein MarC. These proteins may be transporters. ; GO: 0016021 integral to membrane
Probab=24.76 E-value=4.6e+02 Score=22.73 Aligned_cols=58 Identities=17% Similarity=0.174 Sum_probs=30.3
Q ss_pred HhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccCch-HHHHHHHHHHHHHHHH
Q 011529 219 LSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWP-SVFYSFGSLGTVWFTV 276 (483)
Q Consensus 219 ~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g~~-~~~~~~~~~~~~~~~~ 276 (483)
+.+-.++++|-+..-.......+-..+....+..+.+.+|-. ..|-+.+.+.+....+
T Consensus 27 lt~~~~~~~r~~ia~~a~~~a~~ill~f~~~G~~iL~~fgIsl~af~IaGGiiL~~ia~ 85 (203)
T PF01914_consen 27 LTKGMSPKERRRIARRASIIAFIILLIFAFFGQLILNFFGISLPAFRIAGGIILFLIAL 85 (203)
T ss_pred HhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHH
Confidence 344444555544444444444444455556666777777754 3555555544443333
No 363
>PF06638 Strabismus: Strabismus protein; InterPro: IPR009539 This family consists of several strabismus (STB) or Van Gogh-like (VANGL) proteins 1 and 2. The exact function of this family is unknown. It is thought, however that STB1 gene and STB2 may be potent tumour suppressor gene candidates [].; GO: 0007275 multicellular organismal development, 0016021 integral to membrane
Probab=24.22 E-value=4.5e+02 Score=26.37 Aligned_cols=11 Identities=18% Similarity=0.283 Sum_probs=8.7
Q ss_pred cHHHHHHHHHH
Q 011529 193 GLPFLLVVRVF 203 (483)
Q Consensus 193 ~~~~l~~~~~l 203 (483)
.+|.+++.|++
T Consensus 180 syWLFY~vrIl 190 (505)
T PF06638_consen 180 SYWLFYGVRIL 190 (505)
T ss_pred HHHHHhhheee
Confidence 68888888876
No 364
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=23.86 E-value=5.5e+02 Score=23.30 Aligned_cols=13 Identities=15% Similarity=0.503 Sum_probs=7.4
Q ss_pred HHHHHHHHhhcCC
Q 011529 377 GGWIADTLVSKGL 389 (483)
Q Consensus 377 ~g~l~dr~g~~~~ 389 (483)
+-.++.|+..|..
T Consensus 260 Gk~lAskIS~rtV 272 (294)
T KOG2881|consen 260 GKYLASKISVRTV 272 (294)
T ss_pred hHHHhhhheeEEE
Confidence 3345667766643
No 365
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=23.42 E-value=91 Score=23.66 Aligned_cols=32 Identities=16% Similarity=0.172 Sum_probs=27.7
Q ss_pred chhhHHhHHHHHHHHHHHHHHHHHHHHHhhcC
Q 011529 357 TESGLFCVLPWLTMAFSANLGGWIADTLVSKG 388 (483)
Q Consensus 357 ~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~ 388 (483)
...|-.++.++...++.+++.++..|+....+
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~ 85 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPDR 85 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCCh
Confidence 56788899999999999999999999876654
No 366
>COG0730 Predicted permeases [General function prediction only]
Probab=22.79 E-value=5.6e+02 Score=23.00 Aligned_cols=23 Identities=30% Similarity=0.303 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhc
Q 011529 365 LPWLTMAFSANLGGWIADTLVSK 387 (483)
Q Consensus 365 ~~~~~~~i~~~~~g~l~dr~g~~ 387 (483)
...++.++|..++.++..|...+
T Consensus 211 ~l~~g~~~G~~lG~~l~~~~~~~ 233 (258)
T COG0730 211 LLAVGSILGAYLGARLARRLSPK 233 (258)
T ss_pred HHHHHHHHHHHHHHHHHHhcCHH
Confidence 45567777777777777777654
No 367
>PF01810 LysE: LysE type translocator; InterPro: IPR001123 Lysine exporter protein is involved in the efflux of excess L-lysine as a control for intracellular levels of L-lysine. A number of proteins belong to this family. These include the chemotactic transduction protein from Pseudomonas aeruginosa, the threonine efflux protein and a number of uncharacterised proteins from a variety of sources.; GO: 0006865 amino acid transport, 0016020 membrane
Probab=22.78 E-value=4.7e+02 Score=22.07 Aligned_cols=8 Identities=13% Similarity=0.127 Sum_probs=3.2
Q ss_pred HHHHHHHH
Q 011529 377 GGWIADTL 384 (483)
Q Consensus 377 ~g~l~dr~ 384 (483)
.+...+|.
T Consensus 153 ~~~~~~~~ 160 (191)
T PF01810_consen 153 LALLGSRL 160 (191)
T ss_pred HHHHHHHH
Confidence 33344433
No 368
>PF08566 Pam17: Mitochondrial import protein Pam17; InterPro: IPR013875 The presequence translocase-associated motor (PAM) drives the completion of preprotein translocation into the mitochondrial matrix. The Pam17 subunit is required for formation of a stable complex between cochaperones Pam16 and Pam18 and promotes the association of Pam16-Pam18 with the presequence translocase []. Mitochondria lacking Pam17 are selectively impaired in the import of matrix proteins [].
Probab=22.75 E-value=3.2e+02 Score=23.00 Aligned_cols=34 Identities=21% Similarity=0.218 Sum_probs=17.4
Q ss_pred hhhhcCCChhhH-HH-HHHHHHHHHHHHHhhHHHHH
Q 011529 130 MSAEFNWNPATV-GL-IQSSFFWGYLLTQIAGGIWA 163 (483)
Q Consensus 130 ~~~~~g~s~~~~-g~-~~~~~~~~~~~~~~~~g~l~ 163 (483)
...-+|+++..+ |+ ..++..+|.++|..++..+-
T Consensus 68 ~~~I~GlDP~~~~g~~t~a~g~lG~L~GP~~G~~vf 103 (173)
T PF08566_consen 68 TQQIMGLDPFMVYGLATLACGALGWLVGPSLGNQVF 103 (173)
T ss_pred cccccCcCHHHHHHHHHHHHHHHHHHhcchHHHHHH
Confidence 444568887553 22 33445555555554444443
No 369
>PRK02237 hypothetical protein; Provisional
Probab=22.63 E-value=1.4e+02 Score=22.78 Aligned_cols=33 Identities=12% Similarity=0.012 Sum_probs=27.8
Q ss_pred chhhHHhHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 011529 357 TESGLFCVLPWLTMAFSANLGGWIADTLVSKGL 389 (483)
Q Consensus 357 ~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~~~~ 389 (483)
...|-.++.++...++.+++.++..|+...-+.
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~ 88 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRW 88 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChh
Confidence 447889999999999999999999998865543
No 370
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=22.11 E-value=44 Score=26.59 Aligned_cols=9 Identities=11% Similarity=0.179 Sum_probs=3.6
Q ss_pred HHHHHHHHH
Q 011529 261 SVFYSFGSL 269 (483)
Q Consensus 261 ~~~~~~~~~ 269 (483)
|+++++.++
T Consensus 2 W~l~~iii~ 10 (130)
T PF12273_consen 2 WVLFAIIIV 10 (130)
T ss_pred eeeHHHHHH
Confidence 444433333
No 371
>PF11368 DUF3169: Protein of unknown function (DUF3169); InterPro: IPR021509 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently there is no known function.
Probab=22.07 E-value=5.8e+02 Score=22.89 Aligned_cols=25 Identities=24% Similarity=0.313 Sum_probs=14.0
Q ss_pred hHHHHHHHHHHHhHHHHHHhhHHHh
Q 011529 229 SRSLALVYSGMYLGSVTGLAFSPFL 253 (483)
Q Consensus 229 ~~~~~~~~~~~~~g~~~g~~~~~~l 253 (483)
.+.....-.+.-+|+++|...+..-
T Consensus 9 ~~~~~~illg~~iGg~~G~~~~~~~ 33 (248)
T PF11368_consen 9 LRFLLLILLGGLIGGFIGFFIGRIG 33 (248)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455555566666666666554443
No 372
>PRK14232 camphor resistance protein CrcB; Provisional
Probab=21.95 E-value=3.9e+02 Score=20.89 Aligned_cols=14 Identities=7% Similarity=0.045 Sum_probs=7.5
Q ss_pred cchhHHHHHHhhhc
Q 011529 210 VAMPAMNNILSKWV 223 (483)
Q Consensus 210 ~~~~~~~~~~~~~~ 223 (483)
+..+...++..|..
T Consensus 69 GgfTTFSTf~~e~~ 82 (120)
T PRK14232 69 GAYTTFSTFMYEGF 82 (120)
T ss_pred ccchhHHHHHHHHH
Confidence 33455555665555
No 373
>PF04226 Transgly_assoc: Transglycosylase associated protein; InterPro: IPR007341 This bacterial protein is predicted to be an integral membrane protein. Some family members have been annotated as transglycosylase-associated proteins, but no experimental evidence is provided. This family was annotated based on the information in P76011 from SWISSPROT.; GO: 0016021 integral to membrane
Probab=21.84 E-value=2.2e+02 Score=17.99 Aligned_cols=19 Identities=5% Similarity=0.006 Sum_probs=8.9
Q ss_pred chHHHHHHHHHHHHHHHHH
Q 011529 259 WPSVFYSFGSLGTVWFTVW 277 (483)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~ 277 (483)
+.+.-++.+++..+..+..
T Consensus 24 ~~~~~~i~aviGAiill~i 42 (48)
T PF04226_consen 24 GSWGSFIVAVIGAIILLFI 42 (48)
T ss_pred chHHHHHHHHHHHHHHHHH
Confidence 3444445555554444433
No 374
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=21.61 E-value=6.5e+02 Score=23.25 Aligned_cols=60 Identities=10% Similarity=0.045 Sum_probs=32.3
Q ss_pred HHHHHHHHhhhhhcchhHHHHHHhhhcCCcchhHHHHHHHHHHHhHHHHHHhhHHHhhhccC
Q 011529 197 LLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG 258 (483)
Q Consensus 197 l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g 258 (483)
.-..|.+.|+-.- .+...++++.-+||+++.-...--.....+++.++-|++ |.+.+...
T Consensus 22 ~~~lr~~~g~~~v-lf~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~-g~~l~~~~ 81 (287)
T PF07760_consen 22 IPPLRVILGFPFV-LFLPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLI-GLLLNYTP 81 (287)
T ss_pred hhHHHHHHHHHHH-HHhccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHH-HHHHHhcc
Confidence 4556777777643 345667888888885544322222333333344444544 45555433
No 375
>PF11872 DUF3392: Protein of unknown function (DUF3392); InterPro: IPR021813 This family of proteins are functionally uncharacterised. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.
Probab=21.37 E-value=3.8e+02 Score=20.49 Aligned_cols=31 Identities=13% Similarity=0.297 Sum_probs=22.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhHHHHHHHh
Q 011529 322 PVWALIVSHFCHNWGTFILLTWMPTYYNQVL 352 (483)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (483)
-+.+.......+.+++.....+..+++.+.+
T Consensus 50 Fi~Rt~~FIlicAFGYGll~v~~tP~l~~~L 80 (106)
T PF11872_consen 50 FILRTLAFILICAFGYGLLIVWLTPLLARQL 80 (106)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455666666777788888888888888744
No 376
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=21.24 E-value=1.3e+02 Score=22.83 Aligned_cols=31 Identities=23% Similarity=0.173 Sum_probs=22.4
Q ss_pred hhccCchHHHHHHHHHHHHHHHHHHHhccCC
Q 011529 254 IHRFGWPSVFYSFGSLGTVWFTVWLSKAHSS 284 (483)
Q Consensus 254 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (483)
.+..+|+.+|++...++++.+.+.+...|+.
T Consensus 54 ~d~e~we~~~f~~~~~~~v~~~~~~~y~PD~ 84 (105)
T PF10183_consen 54 RDWEGWELPFFFGFSGSLVFGGVFLAYKPDT 84 (105)
T ss_pred chHhhhHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 3456799998887777777777776666654
No 377
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=21.03 E-value=5.5e+02 Score=22.24 Aligned_cols=27 Identities=7% Similarity=0.003 Sum_probs=12.7
Q ss_pred hccCchHHHHHHHHHHHHHHHHHHHhc
Q 011529 255 HRFGWPSVFYSFGSLGTVWFTVWLSKA 281 (483)
Q Consensus 255 ~~~g~~~~~~~~~~~~~~~~~~~~~~~ 281 (483)
...+.+...++..++++++.++.+++.
T Consensus 172 ~~inp~l~~~~~iiig~i~~~~~~~lk 198 (206)
T PF06570_consen 172 PVINPVLPPWVYIIIGVIAFALRFYLK 198 (206)
T ss_pred ccCCcCCCHHHHHHHHHHHHHHHHHHH
Confidence 334444444444455555555544443
No 378
>TIGR00367 K+-dependent Na+/Ca+ exchanger related-protein. This alignment models a family of bacterial and archaeal proteins that is homologous, except for lacking a central region of ~ 250 amino acids and an N-terminal region of 100 residues, to a functionally proven potassium-dependent sodium-calcium exchanger of the rat.
Probab=21.02 E-value=6.9e+02 Score=23.34 Aligned_cols=58 Identities=12% Similarity=0.049 Sum_probs=32.8
Q ss_pred HHHHHHHHhhhhhhhHHhhhhhhhhcCCChhhHHHHHHHHHHHHHHHHhhHHHHHhhcCC
Q 011529 109 CFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGG 168 (483)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~ 168 (483)
+.++..........+......+.+.+|+++...|.... .++..+-..+....+-|-|+
T Consensus 175 ~~~~~~~i~~~s~~~v~~~~~i~~~lgi~~~~~g~tl~--a~~ts~PE~~~~i~a~~~g~ 232 (307)
T TIGR00367 175 LIIGLTGLVVGSRLLVDGAVQIAEIFGISEKIIGLTLL--AIGTSLPELVVSVAAARKGL 232 (307)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHH--HHHcccHHHHHHHHHHHcCC
Confidence 33333333444445556677788999999999886433 22333344444444444454
No 379
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=20.69 E-value=3.8e+02 Score=24.27 Aligned_cols=13 Identities=8% Similarity=0.015 Sum_probs=6.2
Q ss_pred CCChhhHHHHHHH
Q 011529 135 NWNPATVGLIQSS 147 (483)
Q Consensus 135 g~s~~~~g~~~~~ 147 (483)
+.|.....++++-
T Consensus 214 ~as~~~ldYvFs~ 226 (254)
T PF07857_consen 214 GASQNGLDYVFSH 226 (254)
T ss_pred CCCCcchheeHHH
Confidence 4455555544443
Done!