Query 011531
Match_columns 483
No_of_seqs 128 out of 1300
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 10:04:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011531.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011531hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 2.2E-67 7.4E-72 528.1 39.3 437 5-477 11-453 (454)
2 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 6.5E-65 2.2E-69 520.3 38.9 461 5-477 6-478 (482)
3 2c1x_A UDP-glucose flavonoid 3 100.0 1.6E-61 5.6E-66 490.3 39.1 446 1-478 1-452 (456)
4 2vch_A Hydroquinone glucosyltr 100.0 2E-59 6.8E-64 478.1 45.9 445 1-478 1-469 (480)
5 2acv_A Triterpene UDP-glucosyl 100.0 1.7E-58 6E-63 469.4 33.6 435 4-477 6-462 (463)
6 2iya_A OLEI, oleandomycin glyc 100.0 2.1E-43 7.2E-48 356.5 34.3 393 6-477 11-420 (424)
7 4amg_A Snogd; transferase, pol 100.0 2.1E-42 7.3E-47 346.3 33.0 358 5-476 20-398 (400)
8 1iir_A Glycosyltransferase GTF 100.0 4.6E-41 1.6E-45 338.2 23.1 384 8-477 1-399 (415)
9 1rrv_A Glycosyltransferase GTF 100.0 1.3E-39 4.4E-44 327.9 28.2 369 8-457 1-385 (416)
10 3rsc_A CALG2; TDP, enediyne, s 100.0 5E-38 1.7E-42 316.2 35.5 379 4-476 17-411 (415)
11 3h4t_A Glycosyltransferase GTF 100.0 6.1E-39 2.1E-43 321.4 24.6 374 8-477 1-381 (404)
12 3ia7_A CALG4; glycosysltransfe 100.0 6.4E-37 2.2E-41 306.6 35.2 383 8-477 5-397 (402)
13 2yjn_A ERYCIII, glycosyltransf 100.0 6.8E-38 2.3E-42 317.7 28.4 375 6-478 19-435 (441)
14 2iyf_A OLED, oleandomycin glyc 100.0 2.9E-36 9.8E-41 304.8 35.8 377 1-458 1-384 (430)
15 2p6p_A Glycosyl transferase; X 100.0 6.7E-37 2.3E-41 304.8 30.2 359 8-481 1-382 (384)
16 4fzr_A SSFS6; structural genom 100.0 1.4E-34 4.8E-39 289.4 25.1 349 3-457 11-384 (398)
17 3oti_A CALG3; calicheamicin, T 100.0 1.2E-33 4.2E-38 282.5 24.9 353 4-477 17-396 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 5.9E-32 2E-36 269.7 27.8 357 7-477 1-387 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 2.8E-30 9.5E-35 259.3 32.6 361 3-477 16-407 (412)
20 3s2u_A UDP-N-acetylglucosamine 100.0 1.5E-27 5.2E-32 235.0 28.6 317 8-458 3-338 (365)
21 2o6l_A UDP-glucuronosyltransfe 99.9 7.5E-27 2.6E-31 204.6 16.2 162 278-457 7-170 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.8 3.1E-18 1.1E-22 168.4 25.0 302 7-436 6-322 (364)
23 2jzc_A UDP-N-acetylglucosamine 99.6 1.8E-15 6.2E-20 135.8 10.0 133 290-437 26-197 (224)
24 3hbm_A UDP-sugar hydrolase; PS 99.5 3.5E-13 1.2E-17 126.1 18.9 116 291-421 156-273 (282)
25 1v4v_A UDP-N-acetylglucosamine 99.2 2.9E-10 9.8E-15 111.9 19.1 76 354-439 256-334 (376)
26 3ot5_A UDP-N-acetylglucosamine 99.2 2.2E-10 7.5E-15 113.7 17.1 81 354-446 283-366 (403)
27 3dzc_A UDP-N-acetylglucosamine 99.2 3.7E-10 1.3E-14 111.8 16.7 81 354-446 289-372 (396)
28 3okp_A GDP-mannose-dependent a 99.2 5.5E-09 1.9E-13 103.0 24.4 112 352-479 253-379 (394)
29 3c48_A Predicted glycosyltrans 99.1 2.2E-08 7.6E-13 100.4 27.4 94 352-454 306-408 (438)
30 1vgv_A UDP-N-acetylglucosamine 99.1 2.6E-09 8.8E-14 105.2 19.2 129 291-439 204-342 (384)
31 3fro_A GLGA glycogen synthase; 99.1 2.9E-08 1E-12 99.2 25.2 77 353-438 311-394 (439)
32 2gek_A Phosphatidylinositol ma 99.1 8.6E-08 2.9E-12 94.8 27.5 78 354-439 264-349 (406)
33 3beo_A UDP-N-acetylglucosamine 99.0 2E-08 6.7E-13 98.5 21.8 80 354-445 264-346 (375)
34 2r60_A Glycosyl transferase, g 99.0 4E-08 1.4E-12 100.4 21.2 80 351-439 334-424 (499)
35 2iw1_A Lipopolysaccharide core 98.9 1.3E-07 4.5E-12 92.4 21.4 79 354-439 254-337 (374)
36 2iuy_A Avigt4, glycosyltransfe 98.9 1.2E-07 4.1E-12 91.7 19.0 122 295-438 164-307 (342)
37 2jjm_A Glycosyl transferase, g 98.9 7.5E-07 2.6E-11 87.8 24.9 78 354-439 268-350 (394)
38 4hwg_A UDP-N-acetylglucosamine 98.8 7.5E-08 2.6E-12 94.6 14.8 127 292-439 203-342 (385)
39 2x6q_A Trehalose-synthase TRET 98.7 5.8E-06 2E-10 82.0 24.1 76 354-439 294-379 (416)
40 3s28_A Sucrose synthase 1; gly 98.5 2.7E-06 9.2E-11 90.8 19.2 77 352-437 640-728 (816)
41 2vsy_A XCC0866; transferase, g 98.5 0.00062 2.1E-08 70.3 35.2 82 352-439 434-522 (568)
42 1rzu_A Glycogen synthase 1; gl 98.3 0.0001 3.6E-09 74.5 23.3 125 295-437 293-438 (485)
43 3oy2_A Glycosyltransferase B73 98.2 9.1E-05 3.1E-09 73.2 18.8 108 355-477 256-388 (413)
44 2f9f_A First mannosyl transfer 98.1 9.2E-06 3.2E-10 70.3 9.4 127 295-439 25-162 (177)
45 2qzs_A Glycogen synthase; glyc 98.1 0.00038 1.3E-08 70.3 22.1 77 352-437 347-439 (485)
46 2hy7_A Glucuronosyltransferase 98.0 0.0013 4.3E-08 65.0 23.0 72 354-439 266-352 (406)
47 2xci_A KDO-transferase, 3-deox 97.9 0.0029 1E-07 61.6 23.8 95 355-455 262-363 (374)
48 4gyw_A UDP-N-acetylglucosamine 97.5 0.0035 1.2E-07 66.4 17.7 142 290-439 520-668 (723)
49 3q3e_A HMW1C-like glycosyltran 97.5 0.0029 1E-07 64.7 16.1 136 292-439 440-588 (631)
50 3rhz_A GTF3, nucleotide sugar 97.4 0.00027 9.2E-09 67.8 7.6 111 354-476 215-337 (339)
51 3qhp_A Type 1 capsular polysac 96.9 0.011 3.7E-07 49.7 12.4 125 293-439 2-140 (166)
52 3tov_A Glycosyl transferase fa 96.9 0.013 4.4E-07 56.4 13.9 105 6-144 7-115 (349)
53 1psw_A ADP-heptose LPS heptosy 96.9 0.13 4.4E-06 49.0 20.9 103 8-144 1-106 (348)
54 2bfw_A GLGA glycogen synthase; 96.9 0.013 4.6E-07 50.9 12.7 77 354-439 96-181 (200)
55 2x0d_A WSAF; GT4 family, trans 92.7 0.28 9.4E-06 48.1 8.1 83 354-447 296-385 (413)
56 3vue_A GBSS-I, granule-bound s 88.7 0.77 2.6E-05 46.6 7.2 81 350-438 380-476 (536)
57 2phj_A 5'-nucleotidase SURE; S 88.0 2.9 9.8E-05 37.4 9.5 113 8-147 2-127 (251)
58 1uqt_A Alpha, alpha-trehalose- 87.3 3.6 0.00012 41.0 11.1 109 355-479 333-454 (482)
59 2e6c_A 5'-nucleotidase SURE; S 85.8 6.5 0.00022 35.0 10.7 113 8-147 1-129 (244)
60 3t5t_A Putative glycosyltransf 85.5 6 0.00021 39.4 11.4 110 355-479 354-473 (496)
61 3nb0_A Glycogen [starch] synth 85.1 3.5 0.00012 42.7 9.6 78 355-438 492-593 (725)
62 1l5x_A SurviVal protein E; str 85.0 6.1 0.00021 36.0 10.3 114 8-148 1-128 (280)
63 4dzz_A Plasmid partitioning pr 84.4 10 0.00035 32.2 11.4 39 8-46 1-41 (206)
64 3zq6_A Putative arsenical pump 84.0 2.1 7.3E-05 40.2 7.1 44 8-52 14-58 (324)
65 1j9j_A Stationary phase surviV 83.8 8 0.00028 34.5 10.3 115 8-147 1-128 (247)
66 2wqk_A 5'-nucleotidase SURE; S 83.4 4.8 0.00017 36.1 8.8 112 9-147 3-127 (251)
67 3vue_A GBSS-I, granule-bound s 82.5 1.1 3.6E-05 45.6 4.6 40 4-43 6-51 (536)
68 3ug7_A Arsenical pump-driving 82.2 4.7 0.00016 38.2 8.8 48 6-54 24-72 (349)
69 2x0d_A WSAF; GT4 family, trans 82.2 0.74 2.5E-05 45.0 3.2 41 4-44 43-88 (413)
70 2gt1_A Lipopolysaccharide hept 79.4 6.4 0.00022 36.6 8.7 131 291-439 177-322 (326)
71 1g5t_A COB(I)alamin adenosyltr 79.3 23 0.00077 30.3 11.2 100 6-128 27-131 (196)
72 1ccw_A Protein (glutamate muta 78.9 2.6 8.9E-05 33.9 5.0 47 6-52 2-48 (137)
73 3igf_A ALL4481 protein; two-do 78.9 2.9 9.9E-05 40.1 6.1 36 8-43 2-38 (374)
74 3io3_A DEHA2D07832P; chaperone 78.3 1.9 6.5E-05 41.0 4.5 41 5-45 15-58 (348)
75 3q9l_A Septum site-determining 78.3 28 0.00096 30.7 12.4 30 16-45 12-41 (260)
76 2yxb_A Coenzyme B12-dependent 78.0 2.4 8.1E-05 35.3 4.5 48 5-52 16-63 (161)
77 1xmp_A PURE, phosphoribosylami 77.3 22 0.00075 29.4 9.9 143 292-461 11-165 (170)
78 3la6_A Tyrosine-protein kinase 77.2 10 0.00034 34.8 9.0 40 7-46 91-132 (286)
79 4b4k_A N5-carboxyaminoimidazol 77.0 31 0.0011 28.8 11.6 143 292-461 22-176 (181)
80 3kjh_A CO dehydrogenase/acetyl 77.0 3.1 0.00011 36.9 5.4 38 8-45 1-38 (254)
81 3bfv_A CAPA1, CAPB2, membrane 76.8 13 0.00044 33.7 9.6 41 6-46 80-122 (271)
82 3iqw_A Tail-anchored protein t 76.6 8.2 0.00028 36.3 8.4 41 6-46 14-55 (334)
83 3dm5_A SRP54, signal recogniti 76.1 5.4 0.00019 39.1 7.1 42 7-48 100-141 (443)
84 3zqu_A Probable aromatic acid 74.7 3.4 0.00012 35.9 4.8 44 6-50 3-46 (209)
85 1mvl_A PPC decarboxylase athal 73.9 4.4 0.00015 35.2 5.3 42 4-47 16-57 (209)
86 1y80_A Predicted cobalamin bin 73.1 4.9 0.00017 34.9 5.5 47 6-52 87-133 (210)
87 3ezx_A MMCP 1, monomethylamine 72.8 5.7 0.00019 34.7 5.8 48 5-52 90-137 (215)
88 3ty2_A 5'-nucleotidase SURE; s 72.3 4.6 0.00016 36.3 5.1 45 3-49 7-51 (261)
89 3gt7_A Sensor protein; structu 72.0 35 0.0012 27.1 10.8 80 1-147 1-89 (154)
90 3cio_A ETK, tyrosine-protein k 72.0 22 0.00075 32.7 10.0 39 7-45 103-143 (299)
91 3fgn_A Dethiobiotin synthetase 71.5 33 0.0011 30.5 10.8 37 6-42 24-62 (251)
92 1ihu_A Arsenical pump-driving 71.1 7.7 0.00026 39.7 7.3 46 6-52 6-52 (589)
93 2i2x_B MTAC, methyltransferase 70.8 6.2 0.00021 35.6 5.8 46 5-50 121-166 (258)
94 2vqe_B 30S ribosomal protein S 70.2 20 0.00068 32.0 8.7 32 116-148 157-190 (256)
95 3q0i_A Methionyl-tRNA formyltr 70.1 58 0.002 30.2 12.3 35 5-44 5-39 (318)
96 1fmt_A Methionyl-tRNA FMet for 69.7 32 0.0011 31.9 10.5 34 6-44 2-35 (314)
97 3vot_A L-amino acid ligase, BL 69.3 14 0.00049 35.7 8.6 36 5-45 3-38 (425)
98 2woo_A ATPase GET3; tail-ancho 68.7 18 0.00063 33.7 8.8 46 7-53 18-64 (329)
99 1psw_A ADP-heptose LPS heptosy 68.5 49 0.0017 30.6 11.9 39 8-46 181-224 (348)
100 1o4v_A Phosphoribosylaminoimid 68.3 35 0.0012 28.6 9.2 138 291-458 12-162 (183)
101 3tov_A Glycosyl transferase fa 68.1 24 0.00082 33.2 9.6 100 7-147 185-288 (349)
102 2gt1_A Lipopolysaccharide hept 67.5 5.9 0.0002 36.9 5.1 43 8-50 1-45 (326)
103 2bw0_A 10-FTHFDH, 10-formyltet 67.3 38 0.0013 31.6 10.6 33 6-43 21-53 (329)
104 2q5c_A NTRC family transcripti 67.1 6.6 0.00022 33.7 4.9 110 19-149 36-170 (196)
105 1sbz_A Probable aromatic acid 66.7 5.5 0.00019 34.3 4.2 43 8-51 1-44 (197)
106 2lnd_A De novo designed protei 66.4 8.5 0.00029 27.1 4.3 50 389-438 49-100 (112)
107 3qxc_A Dethiobiotin synthetase 65.2 52 0.0018 29.1 10.6 35 8-42 21-57 (242)
108 3qjg_A Epidermin biosynthesis 64.7 8.6 0.00029 32.3 5.0 39 8-47 6-44 (175)
109 1qkk_A DCTD, C4-dicarboxylate 63.1 29 0.00099 27.5 8.1 61 390-454 74-134 (155)
110 3lqk_A Dipicolinate synthase s 62.7 7.7 0.00026 33.4 4.4 39 6-45 6-45 (201)
111 2jzc_A UDP-N-acetylglucosamine 62.4 18 0.0006 31.8 6.8 40 7-46 27-73 (224)
112 3bbn_B Ribosomal protein S2; s 61.0 14 0.00048 32.5 5.9 32 117-148 157-189 (231)
113 3ea0_A ATPase, para family; al 60.6 25 0.00087 30.7 7.8 40 7-46 3-45 (245)
114 1u11_A PURE (N5-carboxyaminoim 60.5 39 0.0013 28.3 8.0 141 293-461 22-175 (182)
115 3tqq_A Methionyl-tRNA formyltr 60.0 52 0.0018 30.4 9.9 33 7-44 2-34 (314)
116 1p3y_1 MRSD protein; flavoprot 59.9 7.9 0.00027 33.2 4.0 41 5-46 6-46 (194)
117 1id1_A Putative potassium chan 59.5 6.3 0.00021 32.0 3.2 34 6-44 2-35 (153)
118 2g1u_A Hypothetical protein TM 58.2 8.8 0.0003 31.2 3.9 37 3-44 15-51 (155)
119 4dim_A Phosphoribosylglycinami 58.1 31 0.0011 32.9 8.5 35 5-44 5-39 (403)
120 3mcu_A Dipicolinate synthase, 57.8 10 0.00035 32.8 4.3 39 6-45 4-43 (207)
121 2ph1_A Nucleotide-binding prot 57.6 60 0.002 28.8 9.8 39 9-47 20-59 (262)
122 2rjn_A Response regulator rece 56.9 69 0.0024 25.1 11.1 38 1-42 1-38 (154)
123 2xxa_A Signal recognition part 56.6 31 0.0011 33.6 8.1 41 8-48 101-142 (433)
124 2r8r_A Sensor protein; KDPD, P 56.6 14 0.00047 32.5 5.0 40 6-45 5-44 (228)
125 1ys7_A Transcriptional regulat 56.5 93 0.0032 26.5 11.2 36 1-40 1-36 (233)
126 3oow_A Phosphoribosylaminoimid 56.3 83 0.0028 25.9 11.9 143 293-462 6-160 (166)
127 3lp6_A Phosphoribosylaminoimid 55.7 38 0.0013 28.1 7.2 138 293-458 8-156 (174)
128 1wrd_A TOM1, target of MYB pro 54.9 15 0.00051 27.8 4.3 52 423-480 2-56 (103)
129 4b4o_A Epimerase family protei 53.8 8 0.00027 35.3 3.3 32 8-43 1-32 (298)
130 3ors_A N5-carboxyaminoimidazol 53.6 89 0.0031 25.6 9.0 136 293-458 4-154 (163)
131 4grd_A N5-CAIR mutase, phospho 53.4 84 0.0029 26.0 8.8 139 291-459 11-164 (173)
132 2ejb_A Probable aromatic acid 53.1 17 0.00057 30.9 4.9 44 8-52 2-45 (189)
133 2i2c_A Probable inorganic poly 52.2 13 0.00043 33.8 4.3 50 373-438 37-92 (272)
134 3rfo_A Methionyl-tRNA formyltr 52.2 1E+02 0.0035 28.4 10.6 36 5-45 2-37 (317)
135 2pju_A Propionate catabolism o 52.1 18 0.00061 31.8 5.0 29 372-401 64-92 (225)
136 2gk4_A Conserved hypothetical 50.5 26 0.00088 30.9 5.8 23 23-45 31-53 (232)
137 3trh_A Phosphoribosylaminoimid 50.5 79 0.0027 26.1 8.2 139 293-458 7-157 (169)
138 2qv5_A AGR_C_5032P, uncharacte 50.3 75 0.0026 28.4 8.9 40 98-145 141-183 (261)
139 3kuu_A Phosphoribosylaminoimid 50.3 1.1E+02 0.0037 25.4 10.6 142 294-462 14-167 (174)
140 2nly_A BH1492 protein, diverge 49.8 1.1E+02 0.0039 26.9 9.9 39 98-144 114-155 (245)
141 1lss_A TRK system potassium up 49.5 13 0.00046 29.1 3.6 33 7-44 4-36 (140)
142 2pju_A Propionate catabolism o 49.2 52 0.0018 28.7 7.6 41 98-147 140-180 (225)
143 3pdi_A Nitrogenase MOFE cofact 49.1 37 0.0013 33.6 7.4 27 116-146 400-426 (483)
144 2ywr_A Phosphoribosylglycinami 48.9 1.3E+02 0.0044 25.9 11.4 104 8-148 2-111 (216)
145 1qzu_A Hypothetical protein MD 48.9 17 0.00058 31.4 4.3 42 5-47 17-59 (206)
146 3goc_A Endonuclease V; alpha-b 48.5 20 0.00068 31.5 4.6 41 99-145 95-141 (237)
147 3kcq_A Phosphoribosylglycinami 47.8 99 0.0034 26.7 9.1 103 4-148 5-113 (215)
148 3tqr_A Phosphoribosylglycinami 46.5 1E+02 0.0034 26.7 8.9 106 6-148 4-114 (215)
149 1kjn_A MTH0777; hypotethical p 46.2 20 0.00068 28.9 3.9 45 6-50 5-51 (157)
150 3mc3_A DSRE/DSRF-like family p 45.6 25 0.00085 27.8 4.5 38 7-44 15-55 (134)
151 3bul_A Methionine synthase; tr 44.9 26 0.00088 35.5 5.5 48 5-52 96-143 (579)
152 3kl4_A SRP54, signal recogniti 44.7 33 0.0011 33.4 6.1 41 8-48 98-138 (433)
153 3da8_A Probable 5'-phosphoribo 44.7 86 0.0029 27.1 8.2 108 5-148 10-120 (215)
154 3s40_A Diacylglycerol kinase; 44.1 61 0.0021 29.6 7.7 82 292-399 10-97 (304)
155 2q5c_A NTRC family transcripti 43.8 14 0.00048 31.6 2.9 31 370-401 50-80 (196)
156 1g63_A Epidermin modifying enz 43.6 20 0.00068 30.2 3.8 39 8-47 3-41 (181)
157 2qs7_A Uncharacterized protein 43.5 23 0.00079 28.5 4.1 44 1-44 2-45 (144)
158 3u7q_B Nitrogenase molybdenum- 43.2 1.5E+02 0.0052 29.5 10.9 34 7-45 364-397 (523)
159 3auf_A Glycinamide ribonucleot 42.9 1.7E+02 0.0057 25.5 12.5 105 7-148 22-132 (229)
160 3u7q_A Nitrogenase molybdenum- 42.9 91 0.0031 30.8 9.1 26 116-145 416-441 (492)
161 3pg5_A Uncharacterized protein 42.6 97 0.0033 29.1 9.0 39 8-46 1-41 (361)
162 1p9o_A Phosphopantothenoylcyst 42.1 16 0.00054 33.9 3.2 38 8-45 37-89 (313)
163 3ga2_A Endonuclease V; alpha-b 41.5 26 0.00088 31.0 4.3 41 99-145 97-143 (246)
164 3llv_A Exopolyphosphatase-rela 40.9 13 0.00046 29.4 2.3 33 7-44 6-38 (141)
165 2vo1_A CTP synthase 1; pyrimid 40.8 25 0.00084 31.6 4.0 42 5-46 20-64 (295)
166 3r8n_B 30S ribosomal protein S 40.7 33 0.0011 29.9 4.8 31 20-50 41-71 (218)
167 3g0o_A 3-hydroxyisobutyrate de 40.6 13 0.00045 34.2 2.5 38 1-43 1-38 (303)
168 3kcn_A Adenylate cyclase homol 40.3 82 0.0028 24.6 7.1 64 390-456 75-139 (151)
169 2w36_A Endonuclease V; hypoxan 40.2 26 0.00088 30.6 4.0 40 100-145 92-137 (225)
170 1j8m_F SRP54, signal recogniti 39.4 1E+02 0.0035 28.1 8.3 40 8-47 99-138 (297)
171 3to5_A CHEY homolog; alpha(5)b 39.0 29 0.00097 27.5 3.9 47 390-438 86-132 (134)
172 3l6d_A Putative oxidoreductase 38.9 14 0.00049 34.0 2.5 38 1-43 3-40 (306)
173 4dll_A 2-hydroxy-3-oxopropiona 38.2 33 0.0011 31.7 4.8 33 6-43 30-62 (320)
174 2iz6_A Molybdenum cofactor car 38.0 1.7E+02 0.0059 24.2 11.1 78 355-438 91-173 (176)
175 3fwz_A Inner membrane protein 37.8 21 0.00071 28.3 2.9 35 6-45 6-40 (140)
176 3oti_A CALG3; calicheamicin, T 37.7 1.4E+02 0.0047 28.1 9.4 40 7-46 231-274 (398)
177 3s2u_A UDP-N-acetylglucosamine 37.2 70 0.0024 30.0 7.1 27 369-397 92-121 (365)
178 1qgu_B Protein (nitrogenase mo 37.0 2E+02 0.0069 28.6 10.6 34 7-45 360-393 (519)
179 2jk1_A HUPR, hydrogenase trans 36.9 1.3E+02 0.0045 22.8 7.8 63 390-455 71-133 (139)
180 4hb9_A Similarities with proba 36.5 20 0.0007 34.0 3.2 30 7-41 1-30 (412)
181 3n0v_A Formyltetrahydrofolate 36.2 1.7E+02 0.0058 26.5 9.1 108 4-148 87-197 (286)
182 1uii_A Geminin; human, DNA rep 36.2 1.2E+02 0.004 21.7 6.4 47 428-480 36-83 (83)
183 3hn2_A 2-dehydropantoate 2-red 35.3 32 0.0011 31.7 4.2 39 8-52 3-41 (312)
184 1hyq_A MIND, cell division inh 35.2 2.2E+02 0.0077 24.7 10.7 36 10-45 5-41 (263)
185 3euw_A MYO-inositol dehydrogen 34.8 2.3E+02 0.0077 26.1 10.2 109 293-421 6-122 (344)
186 2rjn_A Response regulator rece 34.5 24 0.00082 28.0 2.9 63 390-456 78-141 (154)
187 3qrx_B Melittin; calcium-bindi 34.5 13 0.00045 19.5 0.7 17 380-396 1-17 (26)
188 3giu_A Pyrrolidone-carboxylate 34.4 69 0.0024 27.7 5.9 28 6-33 2-31 (215)
189 4g6h_A Rotenone-insensitive NA 34.4 20 0.00067 35.8 2.7 36 5-45 40-75 (502)
190 3sc4_A Short chain dehydrogena 34.3 1.4E+02 0.0048 26.6 8.4 34 8-44 9-42 (285)
191 3dfu_A Uncharacterized protein 34.2 26 0.0009 30.8 3.2 33 6-43 5-37 (232)
192 3q2i_A Dehydrogenase; rossmann 33.8 2E+02 0.0068 26.6 9.7 126 291-438 13-149 (354)
193 3av3_A Phosphoribosylglycinami 33.6 2.3E+02 0.0077 24.2 11.5 104 8-148 4-113 (212)
194 2r85_A PURP protein PF1517; AT 33.3 36 0.0012 31.4 4.3 33 7-45 2-34 (334)
195 2lpm_A Two-component response 33.2 44 0.0015 25.9 4.1 30 116-146 52-86 (123)
196 3qvl_A Putative hydantoin race 32.8 1.3E+02 0.0046 26.4 7.7 37 8-44 2-39 (245)
197 3eag_A UDP-N-acetylmuramate:L- 32.8 37 0.0013 31.5 4.3 33 7-43 4-36 (326)
198 3i83_A 2-dehydropantoate 2-red 32.5 34 0.0011 31.6 3.9 39 8-52 3-41 (320)
199 3h4t_A Glycosyltransferase GTF 32.4 1.5E+02 0.005 28.1 8.7 37 8-44 221-258 (404)
200 1xrs_B D-lysine 5,6-aminomutas 32.4 27 0.00092 31.4 3.0 48 6-53 119-175 (262)
201 3lou_A Formyltetrahydrofolate 32.1 2.3E+02 0.008 25.6 9.4 108 4-148 92-202 (292)
202 3l4e_A Uncharacterized peptida 32.1 52 0.0018 28.2 4.8 46 282-327 18-63 (206)
203 3hwr_A 2-dehydropantoate 2-red 32.0 20 0.00069 33.2 2.2 42 6-52 18-59 (318)
204 1jkx_A GART;, phosphoribosylgl 31.8 2.4E+02 0.0083 24.1 10.2 104 8-148 1-110 (212)
205 3lrx_A Putative hydrogenase; a 31.7 38 0.0013 27.6 3.7 37 7-46 23-59 (158)
206 3f67_A Putative dienelactone h 31.7 67 0.0023 27.2 5.6 37 7-43 31-67 (241)
207 3m2t_A Probable dehydrogenase; 31.5 2E+02 0.0069 26.7 9.3 89 293-400 7-102 (359)
208 3qha_A Putative oxidoreductase 31.5 33 0.0011 31.3 3.6 33 7-44 15-47 (296)
209 3l4b_C TRKA K+ channel protien 31.5 16 0.00055 31.6 1.4 32 8-44 1-32 (218)
210 3ic5_A Putative saccharopine d 31.3 35 0.0012 25.5 3.2 34 6-44 4-38 (118)
211 1mio_A Nitrogenase molybdenum 31.2 1.6E+02 0.0053 29.5 8.7 26 116-145 455-480 (533)
212 3hdg_A Uncharacterized protein 31.2 1.2E+02 0.004 23.0 6.5 48 390-439 78-125 (137)
213 4ds3_A Phosphoribosylglycinami 31.0 2.5E+02 0.0086 24.0 9.5 111 4-148 4-117 (209)
214 1ks9_A KPA reductase;, 2-dehyd 30.7 32 0.0011 30.9 3.4 32 8-44 1-32 (291)
215 1dhr_A Dihydropteridine reduct 30.6 72 0.0025 27.7 5.6 39 1-43 1-39 (241)
216 2c5m_A CTP synthase; cytidine 30.5 29 0.001 30.9 2.8 41 6-46 21-64 (294)
217 2hy5_A Putative sulfurtransfer 30.4 91 0.0031 24.2 5.6 36 8-43 1-40 (130)
218 3ged_A Short-chain dehydrogena 29.4 1.3E+02 0.0046 26.4 7.1 33 9-44 3-35 (247)
219 4e3z_A Putative oxidoreductase 29.3 75 0.0026 28.2 5.6 36 5-43 23-58 (272)
220 3vps_A TUNA, NAD-dependent epi 29.3 56 0.0019 29.6 4.9 39 1-43 1-39 (321)
221 2l2q_A PTS system, cellobiose- 29.2 60 0.002 24.5 4.2 38 6-43 3-40 (109)
222 3eq2_A Probable two-component 29.1 3.4E+02 0.012 25.3 10.6 62 390-455 76-138 (394)
223 3gl9_A Response regulator; bet 29.1 86 0.0029 23.4 5.2 33 116-149 45-86 (122)
224 3sbx_A Putative uncharacterize 29.0 75 0.0026 26.8 5.1 38 6-44 12-53 (189)
225 3kxe_C Antitoxin protein PARD- 29.0 90 0.0031 22.6 4.8 52 425-481 30-81 (88)
226 4eg0_A D-alanine--D-alanine li 29.0 55 0.0019 30.0 4.7 39 7-45 13-55 (317)
227 3l77_A Short-chain alcohol deh 28.7 55 0.0019 28.2 4.5 33 8-43 2-34 (235)
228 3l7i_A Teichoic acid biosynthe 28.5 47 0.0016 34.8 4.6 110 358-477 604-719 (729)
229 3gl9_A Response regulator; bet 28.4 70 0.0024 23.9 4.6 47 390-438 75-121 (122)
230 1zu4_A FTSY; GTPase, signal re 28.4 1.9E+02 0.0065 26.5 8.3 40 8-47 106-145 (320)
231 3ghy_A Ketopantoate reductase 28.3 22 0.00075 33.2 1.8 39 7-50 3-41 (335)
232 1lld_A L-lactate dehydrogenase 28.3 27 0.00092 32.2 2.4 38 2-44 2-41 (319)
233 3cky_A 2-hydroxymethyl glutara 28.2 55 0.0019 29.6 4.5 33 6-43 3-35 (301)
234 3foj_A Uncharacterized protein 28.1 1.1E+02 0.0038 22.1 5.5 34 6-43 55-88 (100)
235 3lyh_A Cobalamin (vitamin B12) 28.1 1.7E+02 0.0058 22.3 6.8 37 291-327 5-41 (126)
236 3to5_A CHEY homolog; alpha(5)b 27.9 81 0.0028 24.7 4.9 33 116-149 56-97 (134)
237 4e5v_A Putative THUA-like prot 27.9 70 0.0024 29.0 5.0 39 5-44 2-43 (281)
238 2ffh_A Protein (FFH); SRP54, s 27.7 79 0.0027 30.6 5.6 41 8-48 99-139 (425)
239 1z82_A Glycerol-3-phosphate de 27.6 35 0.0012 31.7 3.1 34 6-44 13-46 (335)
240 2x5n_A SPRPN10, 26S proteasome 27.6 1.1E+02 0.0037 25.8 6.0 36 8-43 107-143 (192)
241 4g65_A TRK system potassium up 27.3 16 0.00055 36.0 0.6 33 7-44 3-35 (461)
242 2ew2_A 2-dehydropantoate 2-red 27.1 36 0.0012 31.0 3.1 32 7-43 3-34 (316)
243 1bg6_A N-(1-D-carboxylethyl)-L 27.1 37 0.0013 31.7 3.2 32 7-43 4-35 (359)
244 3lf2_A Short chain oxidoreduct 27.0 74 0.0025 28.2 5.1 40 1-43 1-40 (265)
245 3lzw_A Ferredoxin--NADP reduct 27.0 15 0.00053 33.7 0.4 40 1-45 1-40 (332)
246 2raf_A Putative dinucleotide-b 27.0 44 0.0015 28.6 3.4 33 6-43 18-50 (209)
247 3ahc_A Phosphoketolase, xylulo 26.9 4.7E+02 0.016 27.7 11.6 81 375-464 727-813 (845)
248 1yt5_A Inorganic polyphosphate 26.9 27 0.00092 31.2 2.1 50 373-438 43-95 (258)
249 1u0t_A Inorganic polyphosphate 26.8 31 0.0011 31.8 2.5 31 367-399 73-107 (307)
250 2d1p_A TUSD, hypothetical UPF0 26.8 1.1E+02 0.0039 24.2 5.6 38 6-43 11-52 (140)
251 1tvm_A PTS system, galactitol- 26.8 1.2E+02 0.0041 23.0 5.5 41 3-43 17-58 (113)
252 3uug_A Multiple sugar-binding 26.8 3.4E+02 0.012 24.2 12.1 31 117-147 59-92 (330)
253 3ew7_A LMO0794 protein; Q8Y8U8 26.6 88 0.003 26.3 5.4 33 8-44 1-33 (221)
254 1mio_B Nitrogenase molybdenum 26.6 2.6E+02 0.0088 27.2 9.3 26 116-145 384-409 (458)
255 2r6j_A Eugenol synthase 1; phe 26.5 67 0.0023 29.2 4.8 33 9-45 13-45 (318)
256 3k96_A Glycerol-3-phosphate de 26.5 36 0.0012 32.1 2.9 34 6-44 28-61 (356)
257 3o1l_A Formyltetrahydrofolate 26.3 3.7E+02 0.013 24.4 11.5 108 4-148 102-212 (302)
258 3crn_A Response regulator rece 26.3 1.6E+02 0.0054 22.1 6.5 48 390-439 74-121 (132)
259 2woj_A ATPase GET3; tail-ancho 26.1 64 0.0022 30.3 4.6 46 7-53 17-65 (354)
260 2an1_A Putative kinase; struct 26.1 34 0.0012 31.1 2.7 32 366-399 60-95 (292)
261 3eme_A Rhodanese-like domain p 26.1 1.1E+02 0.0036 22.4 5.1 34 6-43 55-88 (103)
262 2qyt_A 2-dehydropantoate 2-red 26.0 21 0.00072 32.8 1.2 32 7-43 8-45 (317)
263 1pjq_A CYSG, siroheme synthase 26.0 4.1E+02 0.014 25.7 10.6 148 290-458 11-168 (457)
264 1mxh_A Pteridine reductase 2; 26.0 62 0.0021 28.8 4.4 32 9-43 12-43 (276)
265 4e5s_A MCCFLIKE protein (BA_56 25.9 1E+02 0.0035 28.6 5.9 73 305-399 62-136 (331)
266 4amg_A Snogd; transferase, pol 25.7 1.5E+02 0.0053 27.6 7.5 41 5-45 234-278 (400)
267 3ip0_A 2-amino-4-hydroxy-6-hyd 25.6 87 0.003 25.6 4.7 28 294-321 2-29 (158)
268 2oxj_A Hybrid alpha/beta pepti 25.5 1E+02 0.0035 17.7 4.6 27 427-455 4-31 (34)
269 3h2s_A Putative NADH-flavin re 25.4 95 0.0032 26.2 5.4 33 8-44 1-33 (224)
270 2p6p_A Glycosyl transferase; X 25.3 2.2E+02 0.0075 26.4 8.4 37 8-44 210-253 (384)
271 3oig_A Enoyl-[acyl-carrier-pro 25.3 3.3E+02 0.011 23.6 9.6 33 9-44 8-42 (266)
272 2hy6_A General control protein 25.2 1E+02 0.0035 17.7 4.7 27 427-455 4-31 (34)
273 3gvc_A Oxidoreductase, probabl 25.2 91 0.0031 27.9 5.4 33 8-43 29-61 (277)
274 1rh1_A Colicin B; FEPA, cytoto 25.0 78 0.0027 30.5 4.7 41 438-481 338-378 (511)
275 2fb6_A Conserved hypothetical 25.0 72 0.0025 24.5 3.9 39 7-45 7-49 (117)
276 1gsa_A Glutathione synthetase; 24.7 58 0.002 29.5 4.0 37 8-44 2-41 (316)
277 4hkt_A Inositol 2-dehydrogenas 24.6 3.6E+02 0.012 24.5 9.6 62 360-421 52-120 (331)
278 1fjh_A 3alpha-hydroxysteroid d 24.6 85 0.0029 27.4 5.0 33 8-43 1-33 (257)
279 2rh8_A Anthocyanidin reductase 24.4 45 0.0015 30.7 3.2 39 1-43 1-41 (338)
280 3jte_A Response regulator rece 24.4 1E+02 0.0035 23.6 5.0 48 390-439 76-123 (143)
281 3jy6_A Transcriptional regulat 24.2 3.5E+02 0.012 23.4 10.9 44 1-44 1-46 (276)
282 2dpo_A L-gulonate 3-dehydrogen 24.2 40 0.0014 31.2 2.7 36 4-44 3-38 (319)
283 1qo0_D AMIR; binding protein, 24.2 2.3E+02 0.0078 23.1 7.5 48 390-439 78-125 (196)
284 3gpi_A NAD-dependent epimerase 24.2 80 0.0028 28.1 4.8 33 7-44 3-35 (286)
285 1cyd_A Carbonyl reductase; sho 24.1 1.3E+02 0.0044 25.9 6.1 39 1-43 1-39 (244)
286 1yb4_A Tartronic semialdehyde 24.1 63 0.0021 29.1 4.1 31 7-42 3-33 (295)
287 3h1g_A Chemotaxis protein CHEY 24.0 95 0.0032 23.3 4.7 46 391-438 81-126 (129)
288 3obi_A Formyltetrahydrofolate 24.0 2.3E+02 0.008 25.6 7.8 114 311-451 156-271 (288)
289 2ywx_A Phosphoribosylaminoimid 23.9 2.9E+02 0.01 22.4 10.1 134 295-458 2-144 (157)
290 3guy_A Short-chain dehydrogena 23.9 55 0.0019 28.2 3.5 33 8-43 1-33 (230)
291 3nrb_A Formyltetrahydrofolate 23.8 2.5E+02 0.0084 25.4 7.9 110 4-148 85-196 (287)
292 3rc1_A Sugar 3-ketoreductase; 23.7 2.2E+02 0.0076 26.3 8.0 111 292-421 28-146 (350)
293 3lyu_A Putative hydrogenase; t 23.7 94 0.0032 24.6 4.6 33 7-41 18-50 (142)
294 3d1l_A Putative NADP oxidoredu 23.7 26 0.00089 31.3 1.3 38 1-43 4-42 (266)
295 3l49_A ABC sugar (ribose) tran 23.6 3.6E+02 0.012 23.4 11.0 39 5-43 3-43 (291)
296 3u3x_A Oxidoreductase; structu 23.6 4.2E+02 0.014 24.5 9.9 92 292-401 27-123 (361)
297 1zmt_A Haloalcohol dehalogenas 23.6 66 0.0023 28.2 4.1 33 8-43 1-33 (254)
298 3end_A Light-independent proto 23.6 76 0.0026 28.8 4.6 39 7-45 40-79 (307)
299 1ny5_A Transcriptional regulat 23.5 2.1E+02 0.0073 27.0 7.9 59 390-452 71-129 (387)
300 3otg_A CALG1; calicheamicin, T 23.5 3.7E+02 0.013 24.9 9.8 39 7-45 241-281 (412)
301 1ehi_A LMDDL2, D-alanine:D-lac 23.5 74 0.0025 30.1 4.6 38 7-44 3-45 (377)
302 1pno_A NAD(P) transhydrogenase 23.3 81 0.0028 25.9 3.9 39 7-45 23-64 (180)
303 3dff_A Teicoplanin pseudoaglyc 23.3 78 0.0027 28.5 4.5 42 1-42 1-42 (273)
304 3nrb_A Formyltetrahydrofolate 23.2 2.2E+02 0.0077 25.7 7.5 114 311-451 155-270 (287)
305 3doj_A AT3G25530, dehydrogenas 23.2 60 0.0021 29.7 3.8 33 6-43 20-52 (310)
306 2pd6_A Estradiol 17-beta-dehyd 23.2 1.5E+02 0.0051 25.8 6.4 39 1-43 1-39 (264)
307 4dmm_A 3-oxoacyl-[acyl-carrier 23.1 95 0.0032 27.6 5.0 34 7-43 27-60 (269)
308 1iow_A DD-ligase, DDLB, D-ALA\ 23.1 1E+02 0.0035 27.7 5.3 38 7-44 2-43 (306)
309 1jx7_A Hypothetical protein YC 23.1 90 0.0031 23.4 4.2 27 18-44 15-43 (117)
310 4ao6_A Esterase; hydrolase, th 23.0 86 0.0029 27.5 4.7 38 7-44 55-94 (259)
311 3dtt_A NADP oxidoreductase; st 22.9 57 0.0019 28.7 3.4 34 5-43 17-50 (245)
312 3dfi_A Pseudoaglycone deacetyl 22.9 89 0.0031 28.0 4.8 42 1-42 1-42 (270)
313 1d4o_A NADP(H) transhydrogenas 22.8 83 0.0029 25.9 3.9 39 7-45 22-63 (184)
314 2zts_A Putative uncharacterize 22.7 59 0.002 28.1 3.5 45 8-52 31-76 (251)
315 4fzr_A SSFS6; structural genom 22.7 1.2E+02 0.0039 28.6 5.9 39 7-45 226-274 (398)
316 3eul_A Possible nitrate/nitrit 22.7 90 0.0031 24.3 4.4 48 390-439 88-135 (152)
317 3evn_A Oxidoreductase, GFO/IDH 22.7 4.3E+02 0.015 23.9 10.2 62 360-421 56-124 (329)
318 1zi8_A Carboxymethylenebutenol 22.6 1E+02 0.0035 25.9 5.1 36 8-43 28-63 (236)
319 3nbm_A PTS system, lactose-spe 22.6 65 0.0022 24.4 3.2 39 4-42 3-41 (108)
320 3t6k_A Response regulator rece 22.5 1E+02 0.0036 23.4 4.7 47 391-439 78-124 (136)
321 3of5_A Dethiobiotin synthetase 22.5 85 0.0029 27.3 4.4 36 7-42 3-40 (228)
322 1f9y_A HPPK, protein (6-hydrox 22.4 1.1E+02 0.0037 25.0 4.7 28 294-321 2-29 (158)
323 4gi5_A Quinone reductase; prot 22.3 1.4E+02 0.0047 27.0 5.8 38 5-42 20-60 (280)
324 3hv2_A Response regulator/HD d 22.3 1.6E+02 0.0056 22.8 5.9 48 390-439 85-133 (153)
325 3kht_A Response regulator; PSI 22.3 1.2E+02 0.004 23.3 4.9 47 390-438 80-127 (144)
326 3edm_A Short chain dehydrogena 22.2 91 0.0031 27.4 4.7 34 7-43 7-40 (259)
327 3l18_A Intracellular protease 22.2 1.9E+02 0.0066 23.2 6.4 39 6-45 1-39 (168)
328 1jay_A Coenzyme F420H2:NADP+ o 22.1 58 0.002 27.6 3.2 32 8-43 1-32 (212)
329 2aef_A Calcium-gated potassium 22.0 28 0.00095 30.4 1.1 35 3-43 5-39 (234)
330 2qx0_A 7,8-dihydro-6-hydroxyme 22.0 1.4E+02 0.0049 24.3 5.3 28 294-321 3-30 (159)
331 1oxz_A ADP-ribosylation factor 21.9 2.3E+02 0.0077 23.8 6.6 38 442-480 79-120 (186)
332 3obi_A Formyltetrahydrofolate 21.8 2.3E+02 0.0077 25.7 7.2 108 4-148 86-197 (288)
333 3dkr_A Esterase D; alpha beta 21.8 89 0.003 26.3 4.5 36 8-43 22-57 (251)
334 3tl4_X Glutaminyl-tRNA synthet 21.8 99 0.0034 26.0 4.4 24 412-439 109-132 (187)
335 3ioy_A Short-chain dehydrogena 21.7 1.3E+02 0.0043 27.6 5.7 33 8-43 8-40 (319)
336 2ptg_A Enoyl-acyl carrier redu 21.7 1.4E+02 0.0048 27.2 6.1 32 8-42 9-42 (319)
337 4f0j_A Probable hydrolytic enz 21.6 95 0.0033 27.3 4.8 37 8-44 46-82 (315)
338 1jbe_A Chemotaxis protein CHEY 21.6 1.9E+02 0.0066 21.3 6.1 46 391-438 79-124 (128)
339 3kto_A Response regulator rece 21.5 1.3E+02 0.0046 22.7 5.1 48 390-439 79-126 (136)
340 3pdi_B Nitrogenase MOFE cofact 21.5 73 0.0025 31.2 4.1 26 116-145 374-399 (458)
341 3dqp_A Oxidoreductase YLBE; al 21.4 1.1E+02 0.0038 25.8 5.0 33 8-44 1-33 (219)
342 1e4e_A Vancomycin/teicoplanin 21.4 69 0.0024 29.7 3.9 38 7-44 3-44 (343)
343 3g1w_A Sugar ABC transporter; 21.4 4.2E+02 0.014 23.2 11.0 38 6-43 3-42 (305)
344 1y1p_A ARII, aldehyde reductas 21.3 1.5E+02 0.0052 26.9 6.3 37 3-43 7-43 (342)
345 1nff_A Putative oxidoreductase 21.3 1.6E+02 0.0055 25.8 6.2 39 1-43 1-39 (260)
346 2hmt_A YUAA protein; RCK, KTN, 21.3 45 0.0015 25.9 2.2 33 7-44 6-38 (144)
347 3m6m_D Sensory/regulatory prot 21.3 1.2E+02 0.0042 23.3 4.9 40 102-147 48-98 (143)
348 2fsv_C NAD(P) transhydrogenase 21.1 92 0.0031 26.2 3.9 38 8-45 47-87 (203)
349 1hdo_A Biliverdin IX beta redu 21.1 1.6E+02 0.0053 24.3 5.9 33 8-44 4-36 (206)
350 3db2_A Putative NADPH-dependen 21.1 2.9E+02 0.0099 25.4 8.3 109 293-421 7-123 (354)
351 2q2v_A Beta-D-hydroxybutyrate 21.1 2.3E+02 0.0079 24.5 7.2 33 9-44 5-37 (255)
352 3rsc_A CALG2; TDP, enediyne, s 21.0 4.7E+02 0.016 24.3 10.0 38 7-44 246-285 (415)
353 3ia7_A CALG4; glycosysltransfe 21.0 2.9E+02 0.0098 25.6 8.4 38 7-44 230-269 (402)
354 4h1h_A LMO1638 protein; MCCF-l 21.0 1.4E+02 0.0049 27.6 5.8 73 305-399 62-136 (327)
355 4eso_A Putative oxidoreductase 20.9 1.1E+02 0.0037 26.9 4.9 33 8-43 8-40 (255)
356 1wlq_A Geminin; coiled-coil; 2 20.8 2.3E+02 0.008 20.1 5.4 45 430-480 30-75 (83)
357 4egf_A L-xylulose reductase; s 20.7 1E+02 0.0035 27.3 4.7 32 9-43 21-52 (266)
358 3pfb_A Cinnamoyl esterase; alp 20.6 1.3E+02 0.0043 25.9 5.3 37 8-44 46-84 (270)
359 2wyu_A Enoyl-[acyl carrier pro 20.6 76 0.0026 28.0 3.8 35 8-44 8-43 (261)
360 1mv8_A GMD, GDP-mannose 6-dehy 20.6 84 0.0029 30.4 4.4 31 8-43 1-31 (436)
361 1djl_A Transhydrogenase DIII; 20.6 95 0.0033 26.2 3.9 38 8-45 46-86 (207)
362 3awd_A GOX2181, putative polyo 20.6 92 0.0031 27.2 4.4 33 9-44 14-46 (260)
363 2y0c_A BCEC, UDP-glucose dehyd 20.6 61 0.0021 32.0 3.4 34 5-43 6-39 (478)
364 2dkn_A 3-alpha-hydroxysteroid 20.5 1.1E+02 0.0038 26.4 4.9 32 9-43 2-33 (255)
365 2bln_A Protein YFBG; transfera 20.5 4.8E+02 0.016 23.6 11.9 32 8-44 1-32 (305)
366 1kd8_B GABH BLL, GCN4 acid bas 20.5 1.4E+02 0.0047 17.4 5.1 29 427-457 4-33 (36)
367 1txg_A Glycerol-3-phosphate de 20.5 47 0.0016 30.6 2.5 31 8-43 1-31 (335)
368 2gdz_A NAD+-dependent 15-hydro 20.5 1.7E+02 0.0059 25.6 6.2 32 9-43 8-39 (267)
369 1k68_A Phytochrome response re 20.4 1.3E+02 0.0043 22.7 4.8 48 390-439 84-131 (140)
370 3pid_A UDP-glucose 6-dehydroge 20.4 60 0.0021 31.5 3.2 36 3-44 32-67 (432)
371 3ego_A Probable 2-dehydropanto 20.3 46 0.0016 30.5 2.3 40 7-52 2-42 (307)
372 2qv7_A Diacylglycerol kinase D 20.3 1.7E+02 0.0057 27.1 6.2 27 373-399 82-114 (337)
373 3c85_A Putative glutathione-re 20.2 54 0.0018 27.1 2.5 34 7-45 39-73 (183)
374 3kkj_A Amine oxidase, flavin-c 20.1 52 0.0018 28.4 2.6 19 24-42 14-32 (336)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=2.2e-67 Score=528.12 Aligned_cols=437 Identities=27% Similarity=0.443 Sum_probs=353.2
Q ss_pred CCCCEEEEEcCCCCCCHHHHHHHHHHHHhCC--cEEEEEeCCCchhhhhhccccccccCCCCCeEEEeCCCCCCCCcccC
Q 011531 5 HVNPHVVLLPYPLQGHIKPMMSLAELLGSAN--FQVTFVNTDHNHDLLLRNTDITSFCNRFPNFQFRSIPSGLPANVIRS 82 (483)
Q Consensus 5 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rG--H~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~~~p~~l~~~~~~~ 82 (483)
.++.||+++|+|++||++|++.||+.|+++| +.||+++++.+..++.+... ...++++|..+|++++.+.. .
T Consensus 11 ~~~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~-----~~~~~i~~~~ipdglp~~~~-~ 84 (454)
T 3hbf_A 11 NNLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSN-----EFLPNIKYYNVHDGLPKGYV-S 84 (454)
T ss_dssp -CCCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSS-----CCCTTEEEEECCCCCCTTCC-C
T ss_pred CCCCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhcccc-----cCCCCceEEecCCCCCCCcc-c
Confidence 4578999999999999999999999999999 99999999766666644321 11357999999999887643 2
Q ss_pred CCCHHHHHHHHHHhchHHHHHHHHHhhhhhcCCCCccEEEEcCCCCcchHHHHHHcCCCeEEEecchhHHHHHHHhhhhh
Q 011531 83 GLTAKDVFDAMKAVSKPAFRDLLISLREETEQRQSPTCVIADGILCFLTLDVSEELQIPLLALRTHNASYSWIYFLLPKL 162 (483)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~D~VI~D~~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~ 162 (483)
..+....+..+...+.+.+++.++++.+.. + .++||||+|.+.+| +..+|+++|||++.++++++..+..+.+.+..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~-~~~~~iI~D~~~~w-~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~ 161 (454)
T 3hbf_A 85 SGNPREPIFLFIKAMQENFKHVIDEAVAET-G-KNITCLVTDAFFWF-GADLAEEMHAKWVPLWTAGPHSLLTHVYTDLI 161 (454)
T ss_dssp CSCTTHHHHHHHHHHHHHHHHHHHHHHHHH-C-CCCCEEEEETTCTT-HHHHHHHTTCEEEEEECSCHHHHHHHHTHHHH
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHhhc-C-CCCcEEEECCcchH-HHHHHHHhCCCEEEEeCccHHHHHHHHhhHHH
Confidence 223333444444445556666666643211 1 57999999999999 99999999999999999999988877776543
Q ss_pred hhC-CCCCCCCCCCCCCccccCCCCCCccCCCCCCccccCCCCChHHHHHHHHHhhhcccccEEEEecC-CCCHHHHHHH
Q 011531 163 VED-GHIPFPDENMEKPVAGIPGFENFLRNRDLPGTCRVKTSDDDYLLQFFIGETFAMTRASALILNTF-EIEAPVVSLL 240 (483)
Q Consensus 163 ~~~-~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~-~l~~~~~~~~ 240 (483)
... +..+. .......++|+++. ++.++++..+.. ...+...+.+.+....+.+++.+++||| +||++.++.+
T Consensus 162 ~~~~~~~~~---~~~~~~~~iPg~p~-~~~~dlp~~~~~--~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~ 235 (454)
T 3hbf_A 162 REKTGSKEV---HDVKSIDVLPGFPE-LKASDLPEGVIK--DIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENEL 235 (454)
T ss_dssp HHTCCHHHH---TTSSCBCCSTTSCC-BCGGGSCTTSSS--CTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHH
T ss_pred HhhcCCCcc---ccccccccCCCCCC-cChhhCchhhcc--CCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHH
Confidence 322 11000 11223456888887 888888876542 1234556666677777788999999999 9999999999
Q ss_pred hhccCcceeeCCcccccccccccCCCCCCCCCCCCcccccccccccccCCCCeEEEEecCcccCCCHHHHHHHHHHHHhC
Q 011531 241 GSHFTKIYTIGPLHELRKSRMKDINSPSVSSSGILQTEDTSCMTWLNSQPPKSVLYVSFGSLVGLTREQMSELWHGLVNR 320 (483)
Q Consensus 241 ~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vi~vs~Gs~~~~~~~~~~~~~~a~~~~ 320 (483)
++.+|++++|||++..... ..+..++++.+||+.+++++||||||||+...+.+++.+++.+++.+
T Consensus 236 ~~~~~~v~~vGPl~~~~~~--------------~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~ 301 (454)
T 3hbf_A 236 NSKFKLLLNVGPFNLTTPQ--------------RKVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEEC 301 (454)
T ss_dssp HTTSSCEEECCCHHHHSCC--------------SCCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHH
T ss_pred HhcCCCEEEECCccccccc--------------ccccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhC
Confidence 9988999999999865321 11123567999999888999999999999998999999999999999
Q ss_pred CCeEEEEEcCCccCCCCCCCCCChhhhhhcCCCceeEEeccCHHHHhccCCccceeeccCchhHHHHHHhCCceeccccc
Q 011531 321 GQRFLLVVRPDLILGEPGAAETPLAQNEGTEERNRFIVSWAPQEEVLAHPAVGGFLTHGGWNSTLEGIAAGVPMICWPQF 400 (483)
Q Consensus 321 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~ItHgG~gs~~eal~~GvP~l~~P~~ 400 (483)
+++|||+++.... ..+++++.++.++| +++++|+||.+||+|+++++||||||+||++||+++|||||++|++
T Consensus 302 ~~~flw~~~~~~~------~~lp~~~~~~~~~~-~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~ 374 (454)
T 3hbf_A 302 GFPFIWSFRGDPK------EKLPKGFLERTKTK-GKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFF 374 (454)
T ss_dssp CCCEEEECCSCHH------HHSCTTHHHHTTTT-EEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCS
T ss_pred CCeEEEEeCCcch------hcCCHhHHhhcCCc-eEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCccc
Confidence 9999999965321 14778888888887 9999999999999999999999999999999999999999999999
Q ss_pred cchhHHHHHHHHhhccceecC-CCCCHHHHHHHHHHHHhH-hHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 011531 401 SDQLVNSRCVSEVWKIGFDMK-DTCDGSIIEKLVRDLMEN-KREEIMGSTDRVATMARDAVNEGGSSYRNLDGLIEDIR 477 (483)
Q Consensus 401 ~DQ~~na~~v~~~~G~G~~l~-~~~~~~~l~~~i~~ll~~-~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~l~~~l~ 477 (483)
+||+.||+++++.+|+|+.++ +.+++++|.++|+++|++ ++++||+||+++++++++++.+||++++++++|+++|.
T Consensus 375 ~DQ~~Na~~v~~~~g~Gv~l~~~~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~i~ 453 (454)
T 3hbf_A 375 GDQGLNTILTESVLEIGVGVDNGVLTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVT 453 (454)
T ss_dssp TTHHHHHHHHHTTSCSEEECGGGSCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHhhCeeEEecCCCCCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHh
Confidence 999999999976469999998 689999999999999985 44589999999999999999999999999999999985
No 2
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=6.5e-65 Score=520.27 Aligned_cols=461 Identities=36% Similarity=0.665 Sum_probs=346.3
Q ss_pred CCCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCCCchhhhhhccccccccCCCCCeEEEeCCCCCCCCc--ccC
Q 011531 5 HVNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTDHNHDLLLRNTDITSFCNRFPNFQFRSIPSGLPANV--IRS 82 (483)
Q Consensus 5 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~~~p~~l~~~~--~~~ 82 (483)
++++||+++|+|+.||++|++.||++|++|||+||+++++.+...+.+.... ......++++|+.+|++++... ...
T Consensus 6 ~~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~-~~~~~~~~i~~~~l~~~lp~~~~~~~~ 84 (482)
T 2pq6_A 6 NRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGP-KAFDGFTDFNFESIPDGLTPMEGDGDV 84 (482)
T ss_dssp --CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC-------------CEEEEEECCCCC--------
T ss_pred CCCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhcccccc-ccccCCCceEEEECCCCCCCcccccCc
Confidence 4468999999999999999999999999999999999997766655442110 0001123799999998776521 112
Q ss_pred CCCHHHHHHHHHHhchHHHHHHHHHhhhhhcCCCCccEEEEcCCCCcchHHHHHHcCCCeEEEecchhHHHHHHHhhhhh
Q 011531 83 GLTAKDVFDAMKAVSKPAFRDLLISLREETEQRQSPTCVIADGILCFLTLDVSEELQIPLLALRTHNASYSWIYFLLPKL 162 (483)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~D~VI~D~~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~ 162 (483)
..+...++..+...+.+.++++++.++....+ .++|+||+|.+..| +..+|+++|||++.++++++.....+.+++.+
T Consensus 85 ~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~-~~~d~vI~D~~~~~-~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~ 162 (482)
T 2pq6_A 85 SQDVPTLCQSVRKNFLKPYCELLTRLNHSTNV-PPVTCLVSDCCMSF-TIQAAEEFELPNVLYFSSSACSLLNVMHFRSF 162 (482)
T ss_dssp -CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSS-CCCCEEEEETTCTH-HHHHHHHTTCCEEEEECSCHHHHHHHTTHHHH
T ss_pred chhHHHHHHHHHHHhhHHHHHHHHHHhhhccC-CCceEEEECCcchh-HHHHHHHcCCCEEEEecccHHHHHHHHHHHHH
Confidence 23455555555456788888988887520001 47999999999998 99999999999999999998877766667777
Q ss_pred hhCCCCCCCCCCC------CCCccccCCCCCCccCCCCCCccccCCCCChHHHHHHHHHhhhcccccEEEEecC-CCCHH
Q 011531 163 VEDGHIPFPDENM------EKPVAGIPGFENFLRNRDLPGTCRVKTSDDDYLLQFFIGETFAMTRASALILNTF-EIEAP 235 (483)
Q Consensus 163 ~~~~~~p~~~~~~------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~-~l~~~ 235 (483)
...+++|...... ....++++++.. ++..+++.++.. ........+.+........+++.+++||+ +||++
T Consensus 163 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~vl~nt~~~le~~ 240 (482)
T 2pq6_A 163 VERGIIPFKDESYLTNGCLETKVDWIPGLKN-FRLKDIVDFIRT-TNPNDIMLEFFIEVADRVNKDTTILLNTFNELESD 240 (482)
T ss_dssp HHTTCSSCSSGGGGTSSGGGCBCCSSTTCCS-CBGGGSCGGGCC-SCTTCHHHHHHHHHHHTCCTTCCEEESSCGGGGHH
T ss_pred HhcCCCCCccccccccccccCccccCCCCCC-CchHHCchhhcc-CCcccHHHHHHHHHHHhhccCCEEEEcChHHHhHH
Confidence 7778888654321 122334455544 445555554443 22233444444445556678899999999 99999
Q ss_pred HHHHHhhccCcceeeCCcccc-cccc-cccCCCCCCCCCCCCcccccccccccccCCCCeEEEEecCcccCCCHHHHHHH
Q 011531 236 VVSLLGSHFTKIYTIGPLHEL-RKSR-MKDINSPSVSSSGILQTEDTSCMTWLNSQPPKSVLYVSFGSLVGLTREQMSEL 313 (483)
Q Consensus 236 ~~~~~~~~~~~~~~vG~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vi~vs~Gs~~~~~~~~~~~~ 313 (483)
.++.+++.++++++|||++.. .... .+. .......+|+.+.++.+|+++++++++|||||||....+.+.+.++
T Consensus 241 ~~~~~~~~~~~v~~VGPl~~~~~~~~~~~~----~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~ 316 (482)
T 2pq6_A 241 VINALSSTIPSIYPIGPLPSLLKQTPQIHQ----LDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEF 316 (482)
T ss_dssp HHHHHHTTCTTEEECCCHHHHHHTSTTGGG----GCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHHH
T ss_pred HHHHHHHhCCcEEEEcCCcccccccccccc----cccccccccccchHHHHHHhcCCCCceEEEecCCcccCCHHHHHHH
Confidence 999888888999999999864 2110 000 0000012334456789999988889999999999988888889999
Q ss_pred HHHHHhCCCeEEEEEcCCccCCCCCCCCCChhhhhhcCCCceeEEeccCHHHHhccCCccceeeccCchhHHHHHHhCCc
Q 011531 314 WHGLVNRGQRFLLVVRPDLILGEPGAAETPLAQNEGTEERNRFIVSWAPQEEVLAHPAVGGFLTHGGWNSTLEGIAAGVP 393 (483)
Q Consensus 314 ~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~ItHgG~gs~~eal~~GvP 393 (483)
+.+|+.++.+|||+++.+... |....+++++.++.++| +++++|+||.++|+|+++++||||||+||++||+++|||
T Consensus 317 ~~~l~~~~~~~l~~~~~~~~~--~~~~~l~~~~~~~~~~~-~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal~~GvP 393 (482)
T 2pq6_A 317 AWGLANCKKSFLWIIRPDLVI--GGSVIFSSEFTNEIADR-GLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVP 393 (482)
T ss_dssp HHHHHHTTCEEEEECCGGGST--TTGGGSCHHHHHHHTTT-EEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCC
T ss_pred HHHHHhcCCcEEEEEcCCccc--cccccCcHhHHHhcCCC-EEEEeecCHHHHhcCCCCCEEEecCCcchHHHHHHcCCC
Confidence 999999999999999654222 21123677887777777 999999999999999999999999999999999999999
Q ss_pred eeccccccchhHHHHHHHHhhccceecCCCCCHHHHHHHHHHHHhH-hHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHH
Q 011531 394 MICWPQFSDQLVNSRCVSEVWKIGFDMKDTCDGSIIEKLVRDLMEN-KREEIMGSTDRVATMARDAVNEGGSSYRNLDGL 472 (483)
Q Consensus 394 ~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~~i~~ll~~-~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~l 472 (483)
+|++|+++||+.||+++++++|+|+.++..+++++|.++|+++|.+ ++++||+||+++++.+++++.+||++++++++|
T Consensus 394 ~i~~P~~~dQ~~na~~~~~~~G~g~~l~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~ 473 (482)
T 2pq6_A 394 MLCWPFFADQPTDCRFICNEWEIGMEIDTNVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKV 473 (482)
T ss_dssp EEECCCSTTHHHHHHHHHHTSCCEEECCSSCCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHH
T ss_pred EEecCcccchHHHHHHHHHHhCEEEEECCCCCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHH
Confidence 9999999999999999974589999998679999999999999986 123799999999999999999999999999999
Q ss_pred HHHHH
Q 011531 473 IEDIR 477 (483)
Q Consensus 473 ~~~l~ 477 (483)
+++|.
T Consensus 474 v~~~~ 478 (482)
T 2pq6_A 474 IKDVL 478 (482)
T ss_dssp HHHTT
T ss_pred HHHHH
Confidence 99884
No 3
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=1.6e-61 Score=490.34 Aligned_cols=446 Identities=25% Similarity=0.446 Sum_probs=326.2
Q ss_pred CCCCCCCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcE--EEEEeCCCchhhhhhccccccccCCCCCeEEEeCCCCCCCC
Q 011531 1 MERSHVNPHVVLLPYPLQGHIKPMMSLAELLGSANFQ--VTFVNTDHNHDLLLRNTDITSFCNRFPNFQFRSIPSGLPAN 78 (483)
Q Consensus 1 ~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~--V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~~~p~~l~~~ 78 (483)
|....+++||+++|+|+.||++|+++||++|++|||. ||+++++.+..++.+... . ...++++|+.++++++..
T Consensus 1 m~~~~~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~--~--~~~~~i~~~~i~~glp~~ 76 (456)
T 2c1x_A 1 MSQTTTNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSM--H--TMQCNIKSYDISDGVPEG 76 (456)
T ss_dssp ------CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC-----------CTTEEEEECCCCCCTT
T ss_pred CCCCCCCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhcccc--c--cCCCceEEEeCCCCCCCc
Confidence 6677778999999999999999999999999999765 577888655554433210 0 112479999999887765
Q ss_pred cccCCCCHHHHHHHHHHhchHHHHHHHHHhhhhhcCCCCccEEEEcCCCCcchHHHHHHcCCCeEEEecchhHHHHHHHh
Q 011531 79 VIRSGLTAKDVFDAMKAVSKPAFRDLLISLREETEQRQSPTCVIADGILCFLTLDVSEELQIPLLALRTHNASYSWIYFL 158 (483)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~D~VI~D~~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~ 158 (483)
.. ........+..+...+.+.++++++++.+.. + .+||+||+|.++.| +..+|+++|||++.++++++.....+.+
T Consensus 77 ~~-~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~-~-~~~d~vI~D~~~~~-~~~vA~~lgiP~v~~~~~~~~~~~~~~~ 152 (456)
T 2c1x_A 77 YV-FAGRPQEDIELFTRAAPESFRQGMVMAVAET-G-RPVSCLVADAFIWF-AADMAAEMGVAWLPFWTAGPNSLSTHVY 152 (456)
T ss_dssp CC-CCCCTTHHHHHHHHHHHHHHHHHHHHHHHHH-T-CCCCEEEEETTSTT-HHHHHHHHTCEEEEEECSCHHHHHHHHT
T ss_pred cc-ccCChHHHHHHHHHHhHHHHHHHHHHHHhcc-C-CCceEEEECCchHh-HHHHHHHhCCCEEEEeCccHHHHHHHhh
Confidence 31 1112223333333334455556665543211 1 58999999999999 9999999999999999998776654433
Q ss_pred hhhhhh-CCCCCCCCCCCCCCccccCCCCCCccCCCCCCccccCCCCChHHHHHHHHHhhhcccccEEEEecC-CCCHHH
Q 011531 159 LPKLVE-DGHIPFPDENMEKPVAGIPGFENFLRNRDLPGTCRVKTSDDDYLLQFFIGETFAMTRASALILNTF-EIEAPV 236 (483)
Q Consensus 159 ~~~~~~-~~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~-~l~~~~ 236 (483)
.+.... .++.+. .........++|++.. ++.++++..+.. ........+..........+++.+++||+ ++|++.
T Consensus 153 ~~~~~~~~~~~~~-~~~~~~~~~~~pg~~~-~~~~~lp~~~~~-~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~ 229 (456)
T 2c1x_A 153 IDEIREKIGVSGI-QGREDELLNFIPGMSK-VRFRDLQEGIVF-GNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSL 229 (456)
T ss_dssp HHHHHHHHCSSCC-TTCTTCBCTTSTTCTT-CBGGGSCTTTSS-SCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHH
T ss_pred hHHHHhccCCccc-ccccccccccCCCCCc-ccHHhCchhhcC-CCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHH
Confidence 332111 122111 1111223345677765 566666543322 11122233333333344567889999999 999998
Q ss_pred HHHHhhccCcceeeCCcccccccccccCCCCCCCCCCCCcccccccccccccCCCCeEEEEecCcccCCCHHHHHHHHHH
Q 011531 237 VSLLGSHFTKIYTIGPLHELRKSRMKDINSPSVSSSGILQTEDTSCMTWLNSQPPKSVLYVSFGSLVGLTREQMSELWHG 316 (483)
Q Consensus 237 ~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vi~vs~Gs~~~~~~~~~~~~~~a 316 (483)
++.+++.+|++++|||++...... . +..+.++.+|++.++++++|||||||....+.+.+.+++.+
T Consensus 230 ~~~~~~~~~~~~~vGpl~~~~~~~-------------~-~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~ 295 (456)
T 2c1x_A 230 TNDLKSKLKTYLNIGPFNLITPPP-------------V-VPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEA 295 (456)
T ss_dssp HHHHHHHSSCEEECCCHHHHC-----------------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHH
T ss_pred HHHHHhcCCCEEEecCcccCcccc-------------c-ccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHH
Confidence 888888889999999998643210 0 12245688999988889999999999998888889999999
Q ss_pred HHhCCCeEEEEEcCCccCCCCCCCCCChhhhhhcCCCceeEEeccCHHHHhccCCccceeeccCchhHHHHHHhCCceec
Q 011531 317 LVNRGQRFLLVVRPDLILGEPGAAETPLAQNEGTEERNRFIVSWAPQEEVLAHPAVGGFLTHGGWNSTLEGIAAGVPMIC 396 (483)
Q Consensus 317 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~ItHgG~gs~~eal~~GvP~l~ 396 (483)
++..+.+|||+++.+.. ..+++++.++.++| +++++|+||.++|+|+++++||||||+||++||+++|||+|+
T Consensus 296 l~~~~~~~lw~~~~~~~------~~l~~~~~~~~~~~-~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~ 368 (456)
T 2c1x_A 296 LEASRVPFIWSLRDKAR------VHLPEGFLEKTRGY-GMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLIC 368 (456)
T ss_dssp HHHHTCCEEEECCGGGG------GGSCTTHHHHHTTT-EEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEE
T ss_pred HHhcCCeEEEEECCcch------hhCCHHHHhhcCCc-eEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEe
Confidence 99999999999964321 14667777666777 999999999999999999999999999999999999999999
Q ss_pred cccccchhHHHHHHHHhhccceecC-CCCCHHHHHHHHHHHHhH-hHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHH
Q 011531 397 WPQFSDQLVNSRCVSEVWKIGFDMK-DTCDGSIIEKLVRDLMEN-KREEIMGSTDRVATMARDAVNEGGSSYRNLDGLIE 474 (483)
Q Consensus 397 ~P~~~DQ~~na~~v~~~~G~G~~l~-~~~~~~~l~~~i~~ll~~-~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~l~~ 474 (483)
+|+++||+.||+++++.+|+|+.++ +.++++.|.++|+++|++ ++++||+||+++++.+++++.+||++++++++|++
T Consensus 369 ~P~~~dQ~~Na~~l~~~~g~g~~l~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~ 448 (456)
T 2c1x_A 369 RPFFGDQRLNGRMVEDVLEIGVRIEGGVFTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVD 448 (456)
T ss_dssp CCCSTTHHHHHHHHHHTSCCEEECGGGSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHH
T ss_pred cCChhhHHHHHHHHHHHhCeEEEecCCCcCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHhhhcCCcHHHHHHHHHH
Confidence 9999999999999976449999998 679999999999999985 23489999999999999999999999999999999
Q ss_pred HHHH
Q 011531 475 DIRL 478 (483)
Q Consensus 475 ~l~~ 478 (483)
+|..
T Consensus 449 ~~~~ 452 (456)
T 2c1x_A 449 LVSK 452 (456)
T ss_dssp HHTS
T ss_pred HHHh
Confidence 9864
No 4
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=2e-59 Score=478.10 Aligned_cols=445 Identities=29% Similarity=0.465 Sum_probs=321.4
Q ss_pred CCCCCCCCEEEEEcCCCCCCHHHHHHHHHHHHhC-CcEEEEEeCCCc--hhhhhhccccccccCCCCCeEEEeCCCCCCC
Q 011531 1 MERSHVNPHVVLLPYPLQGHIKPMMSLAELLGSA-NFQVTFVNTDHN--HDLLLRNTDITSFCNRFPNFQFRSIPSGLPA 77 (483)
Q Consensus 1 ~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~r-GH~V~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~f~~~p~~l~~ 77 (483)
|+. .+++||+++|+|++||++|+++||++|++| ||+||+++++.+ ...+.+... ...++++|+.+|.....
T Consensus 1 M~~-~~~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~-----~~~~~i~~~~l~~~~~~ 74 (480)
T 2vch_A 1 MEE-SKTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLD-----SLPSSISSVFLPPVDLT 74 (480)
T ss_dssp ------CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC------CCTTEEEEECCCCCCT
T ss_pred CCC-CCCcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhcc-----ccCCCceEEEcCCCCCC
Confidence 533 455899999999999999999999999998 999999999763 233322100 00236999999864322
Q ss_pred CcccCCCCHHHHHHHHHHhchHHHHHHHHHhhhhhcCCCCc-cEEEEcCCCCcchHHHHHHcCCCeEEEecchhHHHHHH
Q 011531 78 NVIRSGLTAKDVFDAMKAVSKPAFRDLLISLREETEQRQSP-TCVIADGILCFLTLDVSEELQIPLLALRTHNASYSWIY 156 (483)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~-D~VI~D~~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~ 156 (483)
.. ....+....+......+.+.++++++.+.. . .++ |+||+|.+..| +..+|+++|||++.++++++.....+
T Consensus 75 ~~-~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~---~-~~~pd~vI~D~~~~~-~~~vA~~lgiP~v~~~~~~~~~~~~~ 148 (480)
T 2vch_A 75 DL-SSSTRIESRISLTVTRSNPELRKVFDSFVE---G-GRLPTALVVDLFGTD-AFDVAVEFHVPPYIFYPTTANVLSFF 148 (480)
T ss_dssp TS-CTTCCHHHHHHHHHHTTHHHHHHHHHHHHH---T-TCCCSEEEECTTCGG-GHHHHHHTTCCEEEEECSCHHHHHHH
T ss_pred CC-CCchhHHHHHHHHHHhhhHHHHHHHHHhcc---C-CCCCeEEEECCcchh-HHHHHHHcCCCEEEEECccHHHHHHH
Confidence 11 112233333333344566778888877631 1 468 99999999999 89999999999999999988766655
Q ss_pred HhhhhhhhCCCCCCCCCCCCCCccccCCCCCCccCCCCCCccccCCCCChHHHHHHHHHhhhcccccEEEEecC-CCCHH
Q 011531 157 FLLPKLVEDGHIPFPDENMEKPVAGIPGFENFLRNRDLPGTCRVKTSDDDYLLQFFIGETFAMTRASALILNTF-EIEAP 235 (483)
Q Consensus 157 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~-~l~~~ 235 (483)
.+++........+... .. ....+|++.. +...+++..+.. . .......+........+...+++|++ +++++
T Consensus 149 ~~~~~~~~~~~~~~~~--~~-~~~~~Pg~~p-~~~~~l~~~~~~-~--~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~ 221 (480)
T 2vch_A 149 LHLPKLDETVSCEFRE--LT-EPLMLPGCVP-VAGKDFLDPAQD-R--KDDAYKWLLHNTKRYKEAEGILVNTFFELEPN 221 (480)
T ss_dssp HHHHHHHHHCCSCGGG--CS-SCBCCTTCCC-BCGGGSCGGGSC-T--TSHHHHHHHHHHHHGGGCSEEEESCCTTTSHH
T ss_pred HHHHHHHhcCCCcccc--cC-CcccCCCCCC-CChHHCchhhhc-C--CchHHHHHHHHHHhcccCCEEEEcCHHHHhHH
Confidence 5444322111111110 00 1122344433 444444433322 1 12234444444455567788899999 99998
Q ss_pred HHHHHhh---ccCcceeeCCcccccccccccCCCCCCCCCCCCcccccccccccccCCCCeEEEEecCcccCCCHHHHHH
Q 011531 236 VVSLLGS---HFTKIYTIGPLHELRKSRMKDINSPSVSSSGILQTEDTSCMTWLNSQPPKSVLYVSFGSLVGLTREQMSE 312 (483)
Q Consensus 236 ~~~~~~~---~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vi~vs~Gs~~~~~~~~~~~ 312 (483)
.+..+.+ .++++++|||++..... . ..+..++++.+||++++++++|||||||+...+.+++.+
T Consensus 222 ~~~~l~~~~~~~~~v~~vGpl~~~~~~----------~---~~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~ 288 (480)
T 2vch_A 222 AIKALQEPGLDKPPVYPVGPLVNIGKQ----------E---AKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNE 288 (480)
T ss_dssp HHHHHHSCCTTCCCEEECCCCCCCSCS----------C---C-----CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHH
T ss_pred HHHHHHhcccCCCcEEEEecccccccc----------c---cCccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHH
Confidence 7776653 14789999999854210 0 011245678999998888999999999999888999999
Q ss_pred HHHHHHhCCCeEEEEEcCCccCC----------CCCCCCCChhhhhhcCCCceeEE-eccCHHHHhccCCccceeeccCc
Q 011531 313 LWHGLVNRGQRFLLVVRPDLILG----------EPGAAETPLAQNEGTEERNRFIV-SWAPQEEVLAHPAVGGFLTHGGW 381 (483)
Q Consensus 313 ~~~a~~~~~~~~i~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~nv~~~-~~~p~~~ll~~~~~~~~ItHgG~ 381 (483)
++.+++.++++|||+++.....+ ......+|+++.++..++ .+++ +|+||.+||+|++|++||||||+
T Consensus 289 ~~~al~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~-g~~v~~w~Pq~~vL~h~~v~~fvtHgG~ 367 (480)
T 2vch_A 289 LALGLADSEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKR-GFVIPFWAPQAQVLAHPSTGGFLTHCGW 367 (480)
T ss_dssp HHHHHHHTTCEEEEEECCCCSSTTTTTTCC--CSCGGGGSCTTHHHHTTTT-EEEEESCCCHHHHHHSTTEEEEEECCCH
T ss_pred HHHHHHhcCCcEEEEECCccccccccccccccccchhhhcCHHHHHHhCCC-eEEEeCccCHHHHhCCCCcCeEEecccc
Confidence 99999999999999997642110 000013677777776666 5566 59999999999999999999999
Q ss_pred hhHHHHHHhCCceeccccccchhHHHHHHHHhhccceecC-C---CCCHHHHHHHHHHHHh-HhHHHHHHHHHHHHHHHH
Q 011531 382 NSTLEGIAAGVPMICWPQFSDQLVNSRCVSEVWKIGFDMK-D---TCDGSIIEKLVRDLME-NKREEIMGSTDRVATMAR 456 (483)
Q Consensus 382 gs~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~-~---~~~~~~l~~~i~~ll~-~~~~~~~~~a~~l~~~~~ 456 (483)
||++||+++|||||++|+++||+.||+++++++|+|+.++ . .+++++|+++|+++|. +++++||+||+++++.++
T Consensus 368 ~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~ 447 (480)
T 2vch_A 368 NSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAAC 447 (480)
T ss_dssp HHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHcCCCEEeccccccchHHHHHHHHHhCeEEEeecccCCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999755699999997 4 6899999999999998 223899999999999999
Q ss_pred HHHhcCCChHHHHHHHHHHHHH
Q 011531 457 DAVNEGGSSYRNLDGLIEDIRL 478 (483)
Q Consensus 457 ~~~~~gg~~~~~~~~l~~~l~~ 478 (483)
+++.+||++.+++++|+++|+.
T Consensus 448 ~a~~~gGss~~~~~~~v~~~~~ 469 (480)
T 2vch_A 448 RVLKDDGTSTKALSLVALKWKA 469 (480)
T ss_dssp HHTSTTSHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCHHHHHHHHHHHHHH
Confidence 9999999999999999999976
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=1.7e-58 Score=469.38 Aligned_cols=435 Identities=27% Similarity=0.454 Sum_probs=322.5
Q ss_pred CCCCCEEEEEcCCCCCCHHHHHHHHHHHHhC--CcEEEEEeCCCchh----hhhhccccccccCCCCCeEEEeCCCC-CC
Q 011531 4 SHVNPHVVLLPYPLQGHIKPMMSLAELLGSA--NFQVTFVNTDHNHD----LLLRNTDITSFCNRFPNFQFRSIPSG-LP 76 (483)
Q Consensus 4 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~r--GH~V~~~~~~~~~~----~~~~~~~~~~~~~~~~~v~f~~~p~~-l~ 76 (483)
..+++||+++|+|++||++|+++||++|++| ||+||+++++.+.. ...+... ...++++|+.+|.. ++
T Consensus 6 ~~~~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~-----~~~~~i~~~~lp~~~~~ 80 (463)
T 2acv_A 6 INKNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVL-----ASQPQIQLIDLPEVEPP 80 (463)
T ss_dssp HHHCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHH-----CSCTTEEEEECCCCCCC
T ss_pred CCCCCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcc-----cCCCCceEEECCCCCCC
Confidence 3457899999999999999999999999999 99999999976532 1111100 11246999999975 33
Q ss_pred CCcccCCCCHHHHHHHHHHhchHHHHHHHHHhhhhhcCCCCccEEEEcCCCCcchHHHHHHcCCCeEEEecchhHHHHHH
Q 011531 77 ANVIRSGLTAKDVFDAMKAVSKPAFRDLLISLREETEQRQSPTCVIADGILCFLTLDVSEELQIPLLALRTHNASYSWIY 156 (483)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~D~VI~D~~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~ 156 (483)
... ...+....+......+.+.++++++.+. . .++|+||+|.+..| +..+|+++|||++.++++++..+..+
T Consensus 81 ~~~--~~~~~~~~~~~~~~~~~~~~~~ll~~~~----~-~~~d~vI~D~~~~~-~~~vA~~lgiP~v~~~~~~~~~~~~~ 152 (463)
T 2acv_A 81 PQE--LLKSPEFYILTFLESLIPHVKATIKTIL----S-NKVVGLVLDFFCVS-MIDVGNEFGIPSYLFLTSNVGFLSLM 152 (463)
T ss_dssp CGG--GGGSHHHHHHHHHHHTHHHHHHHHHHHC----C-TTEEEEEEEGGGGG-GHHHHHHTTCCEEEEESSCHHHHHHH
T ss_pred ccc--ccCCccHHHHHHHHhhhHHHHHHHHhcc----C-CCCeEEEECCcchh-HHHHHHHcCCCEEEEeCchHHHHHHH
Confidence 211 0111111122233446677788887752 1 47999999999999 99999999999999999988876665
Q ss_pred HhhhhhhhCCCCCCCCCCCCCCccccCCC-CCCccCCCCCCccccCCCCChHHHHHHHHHhhhcccccEEEEecC-CCCH
Q 011531 157 FLLPKLVEDGHIPFPDENMEKPVAGIPGF-ENFLRNRDLPGTCRVKTSDDDYLLQFFIGETFAMTRASALILNTF-EIEA 234 (483)
Q Consensus 157 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~-~l~~ 234 (483)
.+++..... .+............+|++ .. +...+++..+.. . ...+..+........+.+.+++||| ++|+
T Consensus 153 ~~~~~~~~~--~~~~~~~~~~~~~~~pg~~~~-~~~~~l~~~~~~-~---~~~~~~~~~~~~~~~~~~~~l~nt~~ele~ 225 (463)
T 2acv_A 153 LSLKNRQIE--EVFDDSDRDHQLLNIPGISNQ-VPSNVLPDACFN-K---DGGYIAYYKLAERFRDTKGIIVNTFSDLEQ 225 (463)
T ss_dssp HHGGGSCTT--CCCCCSSGGGCEECCTTCSSC-EEGGGSCHHHHC-T---TTHHHHHHHHHHHHTTSSEEEESCCHHHHH
T ss_pred HHHHhhccc--CCCCCccccCceeECCCCCCC-CChHHCchhhcC-C---chHHHHHHHHHHhcccCCEEEECCHHHHhH
Confidence 555442100 111110000002345665 33 555555433333 2 1234444444555577788999999 9998
Q ss_pred HHHHHHhhc---cCcceeeCCcccccccccccCCCCCCCCCCCCcccccccccccccCCCCeEEEEecCccc-CCCHHHH
Q 011531 235 PVVSLLGSH---FTKIYTIGPLHELRKSRMKDINSPSVSSSGILQTEDTSCMTWLNSQPPKSVLYVSFGSLV-GLTREQM 310 (483)
Q Consensus 235 ~~~~~~~~~---~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vi~vs~Gs~~-~~~~~~~ 310 (483)
+..+.+++. .+++++|||++...... ... ..|..+.++.+|++.++++++|||||||+. ..+.+.+
T Consensus 226 ~~~~~l~~~~~p~~~v~~vGpl~~~~~~~---------~~~-~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~ 295 (463)
T 2acv_A 226 SSIDALYDHDEKIPPIYAVGPLLDLKGQP---------NPK-LDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQI 295 (463)
T ss_dssp HHHHHHHHHCTTSCCEEECCCCCCSSCCC---------BTT-BCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHH
T ss_pred HHHHHHHhccccCCcEEEeCCCccccccc---------ccc-cccccchhHHHHHhcCCCCceEEEEeccccccCCHHHH
Confidence 877765552 57899999998542100 000 002334678999998888999999999999 7888889
Q ss_pred HHHHHHHHhCCCeEEEEEcCCccCCCCCCCCCChhhhhhc--CCCceeEEeccCHHHHhccCCccceeeccCchhHHHHH
Q 011531 311 SELWHGLVNRGQRFLLVVRPDLILGEPGAAETPLAQNEGT--EERNRFIVSWAPQEEVLAHPAVGGFLTHGGWNSTLEGI 388 (483)
Q Consensus 311 ~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~--~~~nv~~~~~~p~~~ll~~~~~~~~ItHgG~gs~~eal 388 (483)
.+++.+++..+++|||+++.+ ...+++++.++. +++ +++++|+||.++|+|+++++||||||+||++||+
T Consensus 296 ~~~~~~l~~~~~~~l~~~~~~-------~~~l~~~~~~~~~~~~~-~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal 367 (463)
T 2acv_A 296 REIALGLKHSGVRFLWSNSAE-------KKVFPEGFLEWMELEGK-GMICGWAPQVEVLAHKAIGGFVSHCGWNSILESM 367 (463)
T ss_dssp HHHHHHHHHHTCEEEEECCCC-------GGGSCTTHHHHHHHHCS-EEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHH
T ss_pred HHHHHHHHhCCCcEEEEECCC-------cccCChhHHHhhccCCC-EEEEccCCHHHHhCCCccCeEEecCCchhHHHHH
Confidence 999999999999999999532 013566776665 676 9999999999999999999999999999999999
Q ss_pred HhCCceeccccccchhHHHHHHHHhhccceec-C----C--CCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhc
Q 011531 389 AAGVPMICWPQFSDQLVNSRCVSEVWKIGFDM-K----D--TCDGSIIEKLVRDLMENKREEIMGSTDRVATMARDAVNE 461 (483)
Q Consensus 389 ~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l-~----~--~~~~~~l~~~i~~ll~~~~~~~~~~a~~l~~~~~~~~~~ 461 (483)
++|||||++|+++||+.||+++++++|+|+.+ + + .+++++|.++|+++|++ +++||+||+++++.+++++.+
T Consensus 368 ~~GvP~i~~P~~~dQ~~Na~~lv~~~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~-~~~~r~~a~~l~~~~~~a~~~ 446 (463)
T 2acv_A 368 WFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDK-DSIVHKKVQEMKEMSRNAVVD 446 (463)
T ss_dssp HTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCT-TCTHHHHHHHHHHHHHHHTST
T ss_pred HcCCCeeeccchhhhHHHHHHHHHHcCeEEEEecccCCCCccccHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999954458999999 2 4 68999999999999962 278999999999999999999
Q ss_pred CCChHHHHHHHHHHHH
Q 011531 462 GGSSYRNLDGLIEDIR 477 (483)
Q Consensus 462 gg~~~~~~~~l~~~l~ 477 (483)
||++++++++|+++|.
T Consensus 447 gGss~~~l~~~v~~~~ 462 (463)
T 2acv_A 447 GGSSLISVGKLIDDIT 462 (463)
T ss_dssp TSHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHhc
Confidence 9999999999999985
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=2.1e-43 Score=356.46 Aligned_cols=393 Identities=18% Similarity=0.205 Sum_probs=263.1
Q ss_pred CCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCCCchhhhhhccccccccCCCCCeEEEeCCCCCCCCccc---C
Q 011531 6 VNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTDHNHDLLLRNTDITSFCNRFPNFQFRSIPSGLPANVIR---S 82 (483)
Q Consensus 6 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~~~p~~l~~~~~~---~ 82 (483)
+.+||+|+++++.||++|+++||++|+++||+|++++++.+.+.+... +++|+.++..++..... .
T Consensus 11 ~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~~-----------g~~~~~~~~~~~~~~~~~~~~ 79 (424)
T 2iya_A 11 TPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKAA-----------GATPVVYDSILPKESNPEESW 79 (424)
T ss_dssp CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH-----------TCEEEECCCCSCCTTCTTCCC
T ss_pred ccceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHhC-----------CCEEEecCccccccccchhhc
Confidence 457999999999999999999999999999999999997766555443 48888888765433211 1
Q ss_pred CCCHHHHHHHHHHhchHHHHHHHHHhhhhhcCCCCccEEEEcCCCCcchHHHHHHcCCCeEEEecchhHHHHHHHhhhhh
Q 011531 83 GLTAKDVFDAMKAVSKPAFRDLLISLREETEQRQSPTCVIADGILCFLTLDVSEELQIPLLALRTHNASYSWIYFLLPKL 162 (483)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~D~VI~D~~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~ 162 (483)
..+....+..+.........++.+.+++ .+||+||+|.+..| +..+|+++|||++.+++.+..... +......
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----~~pD~VI~d~~~~~-~~~~A~~lgIP~v~~~~~~~~~~~-~~~~~~~ 152 (424)
T 2iya_A 80 PEDQESAMGLFLDEAVRVLPQLEDAYAD-----DRPDLIVYDIASWP-APVLGRKWDIPFVQLSPTFVAYEG-FEEDVPA 152 (424)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHHHTTT-----SCCSEEEEETTCTH-HHHHHHHHTCCEEEEESSCCCCTT-HHHHSGG
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhc-----cCCCEEEEcCcccH-HHHHHHhcCCCEEEEecccccccc-ccccccc
Confidence 2233333333333222333444444433 68999999998888 999999999999999876541100 0000000
Q ss_pred hhCCCC-----CCCCCCCCCCccccCCCCCCccCCCCCCccccCCCCChHHHHHHHHHh-------hhcccccEEEEecC
Q 011531 163 VEDGHI-----PFPDENMEKPVAGIPGFENFLRNRDLPGTCRVKTSDDDYLLQFFIGET-------FAMTRASALILNTF 230 (483)
Q Consensus 163 ~~~~~~-----p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~s~ 230 (483)
....+. +......... .. +.. ..+. ... ............ ......+.++++++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~-------~~-~~~-~~~~-~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~ 218 (424)
T 2iya_A 153 VQDPTADRGEEAAAPAGTGDA-------EE-GAE-AEDG-LVR----FFTRLSAFLEEHGVDTPATEFLIAPNRCIVALP 218 (424)
T ss_dssp GSCCCC------------------------------HHH-HHH----HHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSC
T ss_pred ccccccccccccccccccccc-------hh-hhc-cchh-HHH----HHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcc
Confidence 000000 0000000000 00 000 0000 000 000011111100 01124567899999
Q ss_pred -CCCHHHHHHHhhccCcceeeCCcccccccccccCCCCCCCCCCCCcccccccccccccCCCCeEEEEecCcccCCCHHH
Q 011531 231 -EIEAPVVSLLGSHFTKIYTIGPLHELRKSRMKDINSPSVSSSGILQTEDTSCMTWLNSQPPKSVLYVSFGSLVGLTREQ 309 (483)
Q Consensus 231 -~l~~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vi~vs~Gs~~~~~~~~ 309 (483)
+|+++. +.+.+++++|||+..... +..+|++.++++++|||++||......+.
T Consensus 219 ~~l~~~~----~~~~~~~~~vGp~~~~~~----------------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~ 272 (424)
T 2iya_A 219 RTFQIKG----DTVGDNYTFVGPTYGDRS----------------------HQGTWEGPGDGRPVLLIALGSAFTDHLDF 272 (424)
T ss_dssp TTTSTTG----GGCCTTEEECCCCCCCCG----------------------GGCCCCCCCSSCCEEEEECCSSSCCCHHH
T ss_pred hhhCCCc----cCCCCCEEEeCCCCCCcc----------------------cCCCCCccCCCCCEEEEEcCCCCcchHHH
Confidence 887752 345678999999753211 02247765667889999999998667788
Q ss_pred HHHHHHHHHhCCCeEEEEEcCCccCCCCCCCCCChhhhhhcCCCceeEEeccCHHHHhccCCccceeeccCchhHHHHHH
Q 011531 310 MSELWHGLVNRGQRFLLVVRPDLILGEPGAAETPLAQNEGTEERNRFIVSWAPQEEVLAHPAVGGFLTHGGWNSTLEGIA 389 (483)
Q Consensus 310 ~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~ItHgG~gs~~eal~ 389 (483)
+..++++++..+.+++|++... .. ...+ ...++| +.+.+|+||.++|+++++ ||||||+||++||++
T Consensus 273 ~~~~~~al~~~~~~~~~~~g~~--------~~-~~~~-~~~~~~-v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~ 339 (424)
T 2iya_A 273 YRTCLSAVDGLDWHVVLSVGRF--------VD-PADL-GEVPPN-VEVHQWVPQLDILTKASA--FITHAGMGSTMEALS 339 (424)
T ss_dssp HHHHHHHHTTCSSEEEEECCTT--------SC-GGGG-CSCCTT-EEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHH
T ss_pred HHHHHHHHhcCCcEEEEEECCc--------CC-hHHh-ccCCCC-eEEecCCCHHHHHhhCCE--EEECCchhHHHHHHH
Confidence 8899999998888999988431 11 1111 124555 999999999999988876 999999999999999
Q ss_pred hCCceeccccccchhHHHHHHHHhhccceecC-CCCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCChHHH
Q 011531 390 AGVPMICWPQFSDQLVNSRCVSEVWKIGFDMK-DTCDGSIIEKLVRDLMENKREEIMGSTDRVATMARDAVNEGGSSYRN 468 (483)
Q Consensus 390 ~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~-~~~~~~~l~~~i~~ll~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~ 468 (483)
+|||+|++|...||+.||+++++ .|+|+.++ +.++.++|.++|.++|+| ++++++++++++.+++. +| ...
T Consensus 340 ~G~P~i~~p~~~dQ~~na~~l~~-~g~g~~~~~~~~~~~~l~~~i~~ll~~--~~~~~~~~~~~~~~~~~---~~--~~~ 411 (424)
T 2iya_A 340 NAVPMVAVPQIAEQTMNAERIVE-LGLGRHIPRDQVTAEKLREAVLAVASD--PGVAERLAAVRQEIREA---GG--ARA 411 (424)
T ss_dssp TTCCEEECCCSHHHHHHHHHHHH-TTSEEECCGGGCCHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHTS---CH--HHH
T ss_pred cCCCEEEecCccchHHHHHHHHH-CCCEEEcCcCCCCHHHHHHHHHHHHcC--HHHHHHHHHHHHHHHhc---Cc--HHH
Confidence 99999999999999999999975 89999998 678999999999999998 89999999999998763 33 344
Q ss_pred HHHHHHHHH
Q 011531 469 LDGLIEDIR 477 (483)
Q Consensus 469 ~~~l~~~l~ 477 (483)
+.+.|+++.
T Consensus 412 ~~~~i~~~~ 420 (424)
T 2iya_A 412 AADILEGIL 420 (424)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 555555553
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=2.1e-42 Score=346.33 Aligned_cols=358 Identities=18% Similarity=0.197 Sum_probs=227.2
Q ss_pred CCCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCCCchhhhhhccccccccCCCCCeEEEeCCCCCCCC------
Q 011531 5 HVNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTDHNHDLLLRNTDITSFCNRFPNFQFRSIPSGLPAN------ 78 (483)
Q Consensus 5 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~~~p~~l~~~------ 78 (483)
.+.|||+|+++|+.||++|+++||++|++|||+|++++++.+.. +.+. ++.+..+.......
T Consensus 20 ~~~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~-~~~~-----------g~~~~~~~~~~~~~~~~~~~ 87 (400)
T 4amg_A 20 FQSMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRA-VAEA-----------GLCAVDVSPGVNYAKLFVPD 87 (400)
T ss_dssp -CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHH-HHTT-----------TCEEEESSTTCCSHHHHSCC
T ss_pred CCCCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhh-HHhc-----------CCeeEecCCchhHhhhcccc
Confidence 46799999999999999999999999999999999999976544 3332 35666654322211
Q ss_pred -------cccCCCCHHHHHHHHHHhchHHHHHHHHHhhhhhcCCCCccEEEEcCCCCcchHHHHHHcCCCeEEEecchhH
Q 011531 79 -------VIRSGLTAKDVFDAMKAVSKPAFRDLLISLREETEQRQSPTCVIADGILCFLTLDVSEELQIPLLALRTHNAS 151 (483)
Q Consensus 79 -------~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~D~VI~D~~~~~~~~~~A~~lgIP~v~~~~~~~~ 151 (483)
..............+.......+.++++.+++ .+||+||+|.+.++ +..+|+.+|||++.+...+..
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~pD~Vv~d~~~~~-~~~~A~~~gip~~~~~~~~~~ 161 (400)
T 4amg_A 88 DTDVTDPMHSEGLGEGFFAEMFARVSAVAVDGALRTARS-----WRPDLVVHTPTQGA-GPLTAAALQLPCVELPLGPAD 161 (400)
T ss_dssp C------------CHHHHHHHHHHHHHHHHHHHHHHHHH-----HCCSEEEECTTCTH-HHHHHHHTTCCEEECCSSTTT
T ss_pred ccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCCEEEECcchHH-HHHHHHHcCCCceeecccccc
Confidence 00011111112222222233334444444443 68999999999998 999999999999987654332
Q ss_pred HHHHHHhhhhhhhCCCCCCCCCCCCCCccccCCCCCCccCCCCCCccccCCCCChHHHHHHHHHhh-hc-ccccEEEEec
Q 011531 152 YSWIYFLLPKLVEDGHIPFPDENMEKPVAGIPGFENFLRNRDLPGTCRVKTSDDDYLLQFFIGETF-AM-TRASALILNT 229 (483)
Q Consensus 152 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~l~~s 229 (483)
.......... . .......... .. ......+...
T Consensus 162 ~~~~~~~~~~--------------------------------------~-------~l~~~~~~~~~~~~~~~~~~~~~~ 196 (400)
T 4amg_A 162 SEPGLGALIR--------------------------------------R-------AMSKDYERHGVTGEPTGSVRLTTT 196 (400)
T ss_dssp CCHHHHHHHH--------------------------------------H-------HTHHHHHHTTCCCCCSCEEEEECC
T ss_pred cccchhhHHH--------------------------------------H-------HHHHHHHHhCCCcccccchhhccc
Confidence 1111000000 0 0000000000 00 0001111111
Q ss_pred CCCCHHHHHHHhh---ccCcceeeCCcccccccccccCCCCCCCCCCCCcccccccccccccCCCCeEEEEecCcccCCC
Q 011531 230 FEIEAPVVSLLGS---HFTKIYTIGPLHELRKSRMKDINSPSVSSSGILQTEDTSCMTWLNSQPPKSVLYVSFGSLVGLT 306 (483)
Q Consensus 230 ~~l~~~~~~~~~~---~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vi~vs~Gs~~~~~ 306 (483)
. +......+ ..+....+.+... .....+.+|++.++++++|||||||+....
T Consensus 197 ~----~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~ 251 (400)
T 4amg_A 197 P----PSVEALLPEDRRSPGAWPMRYVPY---------------------NGGAVLPDWLPPAAGRRRIAVTLGSIDALS 251 (400)
T ss_dssp C----HHHHHTSCGGGCCTTCEECCCCCC---------------------CCCEECCTTCSCCTTCCEEEECCCSCC--C
T ss_pred C----chhhccCcccccCCcccCcccccc---------------------cccccCcccccccCCCcEEEEeCCcccccC
Confidence 1 11110000 0011111211111 112234468888889999999999987643
Q ss_pred --HHHHHHHHHHHHhCCCeEEEEEcCCccCCCCCCCCCChhhhhhcCCCceeEEeccCHHHHhccCCccceeeccCchhH
Q 011531 307 --REQMSELWHGLVNRGQRFLLVVRPDLILGEPGAAETPLAQNEGTEERNRFIVSWAPQEEVLAHPAVGGFLTHGGWNST 384 (483)
Q Consensus 307 --~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~ItHgG~gs~ 384 (483)
.+.+..++++++..+.+++|........ ... ..++| +++.+|+||.++|+|+++ ||||||+||+
T Consensus 252 ~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~------~~~-----~~~~~-v~~~~~~p~~~lL~~~~~--~v~h~G~~s~ 317 (400)
T 4amg_A 252 GGIAKLAPLFSEVADVDAEFVLTLGGGDLA------LLG-----ELPAN-VRVVEWIPLGALLETCDA--IIHHGGSGTL 317 (400)
T ss_dssp CSSSTTHHHHHHGGGSSSEEEEECCTTCCC------CCC-----CCCTT-EEEECCCCHHHHHTTCSE--EEECCCHHHH
T ss_pred ccHHHHHHHHHHhhccCceEEEEecCcccc------ccc-----cCCCC-EEEEeecCHHHHhhhhhh--eeccCCccHH
Confidence 3567889999999999999988543211 111 14555 999999999999977776 9999999999
Q ss_pred HHHHHhCCceeccccccchhHHHHHHHHhhccceecC-CCCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCC
Q 011531 385 LEGIAAGVPMICWPQFSDQLVNSRCVSEVWKIGFDMK-DTCDGSIIEKLVRDLMENKREEIMGSTDRVATMARDAVNEGG 463 (483)
Q Consensus 385 ~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~-~~~~~~~l~~~i~~ll~~~~~~~~~~a~~l~~~~~~~~~~gg 463 (483)
+||+++|||+|++|+++||+.||+++++ .|+|+.++ .+.++ ++|+++|+| ++||++|+++++.+++. .|
T Consensus 318 ~Eal~~GvP~v~~P~~~dQ~~na~~v~~-~G~g~~l~~~~~~~----~al~~lL~d--~~~r~~a~~l~~~~~~~---~~ 387 (400)
T 4amg_A 318 LTALAAGVPQCVIPHGSYQDTNRDVLTG-LGIGFDAEAGSLGA----EQCRRLLDD--AGLREAALRVRQEMSEM---PP 387 (400)
T ss_dssp HHHHHHTCCEEECCC---CHHHHHHHHH-HTSEEECCTTTCSH----HHHHHHHHC--HHHHHHHHHHHHHHHTS---CC
T ss_pred HHHHHhCCCEEEecCcccHHHHHHHHHH-CCCEEEcCCCCchH----HHHHHHHcC--HHHHHHHHHHHHHHHcC---CC
Confidence 9999999999999999999999999975 89999998 55655 467789999 99999999999999875 33
Q ss_pred ChHHHHHHHHHHH
Q 011531 464 SSYRNLDGLIEDI 476 (483)
Q Consensus 464 ~~~~~~~~l~~~l 476 (483)
...+.++||.|
T Consensus 388 --~~~~a~~le~l 398 (400)
T 4amg_A 388 --PAETAAXLVAL 398 (400)
T ss_dssp --HHHHHHHHHHH
T ss_pred --HHHHHHHHHHh
Confidence 45566677766
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=4.6e-41 Score=338.24 Aligned_cols=384 Identities=14% Similarity=0.130 Sum_probs=244.7
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCCCchhhhhhccccccccCCCCCeEEEeCCCCCCCCcccCCCCHH
Q 011531 8 PHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTDHNHDLLLRNTDITSFCNRFPNFQFRSIPSGLPANVIRSGLTAK 87 (483)
Q Consensus 8 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~~~p~~l~~~~~~~~~~~~ 87 (483)
|||+|+++++.||++|+++||++|+++||+|++++++.+.+.+... +++|+.++...............
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~-----------g~~~~~i~~~~~~~~~~~~~~~~ 69 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAEV-----------GVPHVPVGPSARAPIQRAKPLTA 69 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHT-----------TCCEEECCC-------CCSCCCH
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHHc-----------CCeeeeCCCCHHHHhhcccccch
Confidence 6999999999999999999999999999999999997654444332 48888888543211000011111
Q ss_pred HHHHHHHHhchHHHHHHHHHhhhhhcCCCCccEEEEcCCCCcc--hHHHHHHcCCCeEEEecchhHHHHHHHhhhhhhhC
Q 011531 88 DVFDAMKAVSKPAFRDLLISLREETEQRQSPTCVIADGILCFL--TLDVSEELQIPLLALRTHNASYSWIYFLLPKLVED 165 (483)
Q Consensus 88 ~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~D~VI~D~~~~~~--~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~ 165 (483)
.. +...+.....++++.+.+. . .+||+||+|.....+ +..+|+++|||++.+++.+... ..
T Consensus 70 ~~---~~~~~~~~~~~~~~~l~~~--~-~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~-----------~~ 132 (415)
T 1iir_A 70 ED---VRRFTTEAIATQFDEIPAA--A-EGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYV-----------PS 132 (415)
T ss_dssp HH---HHHHHHHHHHHHHHHHHHH--T-TTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGS-----------CC
T ss_pred HH---HHHHHHHHHHHHHHHHHHH--h-cCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcC-----------CC
Confidence 11 1111222233334443210 1 589999999744444 5789999999999998765431 01
Q ss_pred CCCCCCCCCCCCCccccCC-CCCCccCCCCCCccccCCCCChHHHHHHHHHh---------hhcccccEEEEecC-CCCH
Q 011531 166 GHIPFPDENMEKPVAGIPG-FENFLRNRDLPGTCRVKTSDDDYLLQFFIGET---------FAMTRASALILNTF-EIEA 234 (483)
Q Consensus 166 ~~~p~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~l~~s~-~l~~ 234 (483)
.++|..... +...++ ..|.+........... ......+...... +..... .++++++ +|++
T Consensus 133 ~~~p~~~~~----~~~~~~~~~n~~~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~ 204 (415)
T 1iir_A 133 PYYPPPPLG----EPSTQDTIDIPAQWERNNQSAYQ---RYGGLLNSHRDAIGLPPVEDIFTFGYTD-HPWVAADPVLAP 204 (415)
T ss_dssp SSSCCCC-------------CHHHHHHHHHHHHHHH---HHHHHHHHHHHHTTCCCCCCHHHHHHCS-SCEECSCTTTSC
T ss_pred cccCCccCC----ccccchHHHHHHHHHHHHHHHHH---HhHHHHHHHHHHcCCCCCCccccccCCC-CEEEeeChhhcC
Confidence 122221111 000000 0010000000000000 0000000011000 001122 6789999 8876
Q ss_pred -HHHHHHhhccCcceeeCCcccccccccccCCCCCCCCCCCCcccccccccccccCCCCeEEEEecCcccCCCHHHHHHH
Q 011531 235 -PVVSLLGSHFTKIYTIGPLHELRKSRMKDINSPSVSSSGILQTEDTSCMTWLNSQPPKSVLYVSFGSLVGLTREQMSEL 313 (483)
Q Consensus 235 -~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vi~vs~Gs~~~~~~~~~~~~ 313 (483)
+ ++.+ ++++||++..... +..+.++.+|++++ +++|||++||.. ...+.+..+
T Consensus 205 ~~-----~~~~-~~~~vG~~~~~~~-----------------~~~~~~~~~~l~~~--~~~v~v~~Gs~~-~~~~~~~~~ 258 (415)
T 1iir_A 205 LQ-----PTDL-DAVQTGAWILPDE-----------------RPLSPELAAFLDAG--PPPVYLGFGSLG-APADAVRVA 258 (415)
T ss_dssp CC-----CCSS-CCEECCCCCCCCC-----------------CCCCHHHHHHHHTS--SCCEEEECC----CCHHHHHHH
T ss_pred CC-----cccC-CeEeeCCCccCcc-----------------cCCCHHHHHHHhhC--CCeEEEeCCCCC-CcHHHHHHH
Confidence 4 3444 8999999875311 23455688899744 478999999997 667778889
Q ss_pred HHHHHhCCCeEEEEEcCCccCCCCCCCCCChhhhhhcCCCceeEEeccCHHHHhccCCccceeeccCchhHHHHHHhCCc
Q 011531 314 WHGLVNRGQRFLLVVRPDLILGEPGAAETPLAQNEGTEERNRFIVSWAPQEEVLAHPAVGGFLTHGGWNSTLEGIAAGVP 393 (483)
Q Consensus 314 ~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~ItHgG~gs~~eal~~GvP 393 (483)
+++++..+.+++|+++.... .. ...++| +.+.+|+||.++|+.+ ++||||||+||+.||+++|||
T Consensus 259 ~~al~~~~~~~v~~~g~~~~-------~~-----~~~~~~-v~~~~~~~~~~~l~~~--d~~v~~~G~~t~~Ea~~~G~P 323 (415)
T 1iir_A 259 IDAIRAHGRRVILSRGWADL-------VL-----PDDGAD-CFAIGEVNHQVLFGRV--AAVIHHGGAGTTHVAARAGAP 323 (415)
T ss_dssp HHHHHHTTCCEEECTTCTTC-------CC-----SSCGGG-EEECSSCCHHHHGGGS--SEEEECCCHHHHHHHHHHTCC
T ss_pred HHHHHHCCCeEEEEeCCCcc-------cc-----cCCCCC-EEEeCcCChHHHHhhC--CEEEeCCChhHHHHHHHcCCC
Confidence 99999999999998843210 11 113344 9999999999999554 559999999999999999999
Q ss_pred eeccccccchhHHHHHHHHhhccceecC-CCCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHH
Q 011531 394 MICWPQFSDQLVNSRCVSEVWKIGFDMK-DTCDGSIIEKLVRDLMENKREEIMGSTDRVATMARDAVNEGGSSYRNLDGL 472 (483)
Q Consensus 394 ~l~~P~~~DQ~~na~~v~~~~G~G~~l~-~~~~~~~l~~~i~~ll~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~l 472 (483)
+|++|...||..||+++++ .|+|+.++ +.++.+.|.++|.++ +| ++++++++++++.+++. .....+.+.
T Consensus 324 ~i~~p~~~dQ~~na~~l~~-~g~g~~~~~~~~~~~~l~~~i~~l-~~--~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 394 (415)
T 1iir_A 324 QILLPQMADQPYYAGRVAE-LGVGVAHDGPIPTFDSLSAALATA-LT--PETHARATAVAGTIRTD-----GAAVAARLL 394 (415)
T ss_dssp EEECCCSTTHHHHHHHHHH-HTSEEECSSSSCCHHHHHHHHHHH-TS--HHHHHHHHHHHHHSCSC-----HHHHHHHHH
T ss_pred EEECCCCCccHHHHHHHHH-CCCcccCCcCCCCHHHHHHHHHHH-cC--HHHHHHHHHHHHHHhhc-----ChHHHHHHH
Confidence 9999999999999999964 89999998 678999999999999 88 89999999999888542 223445555
Q ss_pred HHHHH
Q 011531 473 IEDIR 477 (483)
Q Consensus 473 ~~~l~ 477 (483)
|+++.
T Consensus 395 i~~~~ 399 (415)
T 1iir_A 395 LDAVS 399 (415)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55543
No 9
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=1.3e-39 Score=327.89 Aligned_cols=369 Identities=14% Similarity=0.102 Sum_probs=242.5
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCCCchhhhhhccccccccCCCCCeEEEeCCCCCCCCccc-CCCCH
Q 011531 8 PHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTDHNHDLLLRNTDITSFCNRFPNFQFRSIPSGLPANVIR-SGLTA 86 (483)
Q Consensus 8 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~~~p~~l~~~~~~-~~~~~ 86 (483)
|||+|+++++.||++|+++||++|+++||+|++++++.+.+.+... +++|+.++......... .....
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~-----------g~~~~~~~~~~~~~~~~~~~~~~ 69 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEV-----------GVPHVPVGLPQHMMLQEGMPPPP 69 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH-----------TCCEEECSCCGGGCCCTTSCCCC
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc-----------CCeeeecCCCHHHHHhhccccch
Confidence 6999999999999999999999999999999999997654444432 47888887542211000 01111
Q ss_pred HHHHHHHHHhchHHHHHHHHHhhhhhcCCCCccEEEEcCCCCcc--hHHHHHHcCCCeEEEecchhHHHHHHHhhhhhhh
Q 011531 87 KDVFDAMKAVSKPAFRDLLISLREETEQRQSPTCVIADGILCFL--TLDVSEELQIPLLALRTHNASYSWIYFLLPKLVE 164 (483)
Q Consensus 87 ~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~D~VI~D~~~~~~--~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~ 164 (483)
...+ ...+...+.++++.+.+. . .+||+||+|.+...+ +..+|+.+|||++.+++.+... .
T Consensus 70 ~~~~---~~~~~~~~~~~~~~l~~~--~-~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~-----------~ 132 (416)
T 1rrv_A 70 PEEE---QRLAAMTVEMQFDAVPGA--A-EGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYL-----------A 132 (416)
T ss_dssp HHHH---HHHHHHHHHHHHHHHHHH--T-TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGS-----------C
T ss_pred hHHH---HHHHHHHHHHHHHHHHHH--h-cCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCC-----------C
Confidence 1111 111112223444444311 1 589999999744443 5779999999999987765321 0
Q ss_pred CCCCCCCCCCCCCCccccCC-CCCCccCCCCCCccccCCCCChHHHHHHHHHh---------hhcccccEEEEecC-CCC
Q 011531 165 DGHIPFPDENMEKPVAGIPG-FENFLRNRDLPGTCRVKTSDDDYLLQFFIGET---------FAMTRASALILNTF-EIE 233 (483)
Q Consensus 165 ~~~~p~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~l~~s~-~l~ 233 (483)
..++| .... +...++ +.|.+........... ......+...... +...+. .++++++ +++
T Consensus 133 ~~~~p-~~~~----~~~~~~r~~n~~~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~ 203 (416)
T 1rrv_A 133 SPHLP-PAYD----EPTTPGVTDIRVLWEERAARFAD---RYGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAADPVLA 203 (416)
T ss_dssp CSSSC-CCBC----SCCCTTCCCHHHHHHHHHHHHHH---HHHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECSCTTTS
T ss_pred CcccC-CCCC----CCCCchHHHHHHHHHHHHHHHHH---HhHHHHHHHHHHcCCCCCCchhhhccCC-CeEEccCcccc
Confidence 11222 1000 000011 1110000000000000 0000000111100 111223 6888998 887
Q ss_pred HHHHHHHhhccCcceeeCCcccccccccccCCCCCCCCCCCCcccccccccccccCCCCeEEEEecCcccC-CCHHHHHH
Q 011531 234 APVVSLLGSHFTKIYTIGPLHELRKSRMKDINSPSVSSSGILQTEDTSCMTWLNSQPPKSVLYVSFGSLVG-LTREQMSE 312 (483)
Q Consensus 234 ~~~~~~~~~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vi~vs~Gs~~~-~~~~~~~~ 312 (483)
++ ++.+ ++++||++..... ++.+.++.+|++++ +++|||++||... ...+.+..
T Consensus 204 ~~-----~~~~-~~~~vG~~~~~~~-----------------~~~~~~~~~~l~~~--~~~v~v~~Gs~~~~~~~~~~~~ 258 (416)
T 1rrv_A 204 PL-----QPDV-DAVQTGAWLLSDE-----------------RPLPPELEAFLAAG--SPPVHIGFGSSSGRGIADAAKV 258 (416)
T ss_dssp CC-----CSSC-CCEECCCCCCCCC-----------------CCCCHHHHHHHHSS--SCCEEECCTTCCSHHHHHHHHH
T ss_pred CC-----CCCC-CeeeECCCccCcc-----------------CCCCHHHHHHHhcC--CCeEEEecCCCCccChHHHHHH
Confidence 65 3333 7999999875311 23355678899744 4789999999875 34566788
Q ss_pred HHHHHHhCCCeEEEEEcCCccCCCCCCCCCChhhhhhcCCCceeEEeccCHHHHhccCCccceeeccCchhHHHHHHhCC
Q 011531 313 LWHGLVNRGQRFLLVVRPDLILGEPGAAETPLAQNEGTEERNRFIVSWAPQEEVLAHPAVGGFLTHGGWNSTLEGIAAGV 392 (483)
Q Consensus 313 ~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~ItHgG~gs~~eal~~Gv 392 (483)
++++++..+.+++|+++.. .... ...++| +.+.+|+||.++|++++ +||||||+||++||+++||
T Consensus 259 ~~~al~~~~~~~v~~~g~~--------~~~~----~~~~~~-v~~~~~~~~~~ll~~~d--~~v~~~G~~t~~Ea~~~G~ 323 (416)
T 1rrv_A 259 AVEAIRAQGRRVILSRGWT--------ELVL----PDDRDD-CFAIDEVNFQALFRRVA--AVIHHGSAGTEHVATRAGV 323 (416)
T ss_dssp HHHHHHHTTCCEEEECTTT--------TCCC----SCCCTT-EEEESSCCHHHHGGGSS--EEEECCCHHHHHHHHHHTC
T ss_pred HHHHHHHCCCeEEEEeCCc--------cccc----cCCCCC-EEEeccCChHHHhccCC--EEEecCChhHHHHHHHcCC
Confidence 9999999999999998432 1100 123455 99999999999995555 5999999999999999999
Q ss_pred ceeccccccchhHHHHHHHHhhccceecC-CCCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHH
Q 011531 393 PMICWPQFSDQLVNSRCVSEVWKIGFDMK-DTCDGSIIEKLVRDLMENKREEIMGSTDRVATMARD 457 (483)
Q Consensus 393 P~l~~P~~~DQ~~na~~v~~~~G~G~~l~-~~~~~~~l~~~i~~ll~~~~~~~~~~a~~l~~~~~~ 457 (483)
|+|++|+..||+.||+++++ .|+|+.++ ...+.+.|.++|.++ .| ++|+++++++++.+++
T Consensus 324 P~i~~p~~~dQ~~na~~l~~-~g~g~~~~~~~~~~~~l~~~i~~l-~~--~~~~~~~~~~~~~~~~ 385 (416)
T 1rrv_A 324 PQLVIPRNTDQPYFAGRVAA-LGIGVAHDGPTPTFESLSAALTTV-LA--PETRARAEAVAGMVLT 385 (416)
T ss_dssp CEEECCCSBTHHHHHHHHHH-HTSEEECSSSCCCHHHHHHHHHHH-TS--HHHHHHHHHHTTTCCC
T ss_pred CEEEccCCCCcHHHHHHHHH-CCCccCCCCCCCCHHHHHHHHHHh-hC--HHHHHHHHHHHHHHhh
Confidence 99999999999999999965 89999998 679999999999999 88 8999999999988865
No 10
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=5e-38 Score=316.22 Aligned_cols=379 Identities=15% Similarity=0.152 Sum_probs=251.6
Q ss_pred CCCCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCCCchhhhhhccccccccCCCCCeEEEeCCCCCCCCccc--
Q 011531 4 SHVNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTDHNHDLLLRNTDITSFCNRFPNFQFRSIPSGLPANVIR-- 81 (483)
Q Consensus 4 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~~~p~~l~~~~~~-- 81 (483)
+++.|||+|+++++.||++|+++||++|+++||+|++++++.+.+.+.+. ++.|..++..++.....
T Consensus 17 ~~~m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~~-----------G~~~~~~~~~~~~~~~~~~ 85 (415)
T 3rsc_A 17 GRHMAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRAA-----------GATVVPYQSEIIDADAAEV 85 (415)
T ss_dssp --CCCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHT-----------TCEEEECCCSTTTCCHHHH
T ss_pred cccCCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHhc-----------CCEEEeccccccccccchh
Confidence 44568999999999999999999999999999999999987666666543 48888888655432110
Q ss_pred -CCCCHHHHHHH-HHHhchHHHHHHHHHhhhhhcCCCCccEEEEc-CCCCcchHHHHHHcCCCeEEEecchhHHHHHHHh
Q 011531 82 -SGLTAKDVFDA-MKAVSKPAFRDLLISLREETEQRQSPTCVIAD-GILCFLTLDVSEELQIPLLALRTHNASYSWIYFL 158 (483)
Q Consensus 82 -~~~~~~~~~~~-~~~~~~~~~~~ll~~~~~~~~~~~~~D~VI~D-~~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~ 158 (483)
........+.. +.......+.++.+.+++ ++||+||+| ...++ +..+|+++|||++.+.+......
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----~~PDlVi~d~~~~~~-~~~aA~~~giP~v~~~~~~~~~~----- 154 (415)
T 3rsc_A 86 FGSDDLGVRPHLMYLRENVSVLRATAEALDG-----DVPDLVLYDDFPFIA-GQLLAARWRRPAVRLSAAFASNE----- 154 (415)
T ss_dssp HHSSSSCHHHHHHHHHHHHHHHHHHHHHHSS-----SCCSEEEEESTTHHH-HHHHHHHTTCCEEEEESSCCCCS-----
T ss_pred hccccHHHHHHHHHHHHHHHHHHHHHHHHhc-----cCCCEEEECchhhhH-HHHHHHHhCCCEEEEEecccccC-----
Confidence 00111111111 222222233444444443 789999999 77777 89999999999999875432100
Q ss_pred hhhhhhCCCCCCCCCCCCCCccccCCCCCCccCCCCCCccccCCCCChHHHHHHHHHh-------hhcccc-cEEEEecC
Q 011531 159 LPKLVEDGHIPFPDENMEKPVAGIPGFENFLRNRDLPGTCRVKTSDDDYLLQFFIGET-------FAMTRA-SALILNTF 230 (483)
Q Consensus 159 ~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~-~~~l~~s~ 230 (483)
.+.+. ....+ ......+..... ............ ...... +..++...
T Consensus 155 -------~~~~~--------~~~~~-----~~~~~~p~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~ 210 (415)
T 3rsc_A 155 -------HYSFS--------QDMVT-----LAGTIDPLDLPV----FRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVP 210 (415)
T ss_dssp -------SCCHH--------HHHHH-----HHTCCCGGGCHH----HHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSC
T ss_pred -------ccccc--------ccccc-----ccccCChhhHHH----HHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcC
Confidence 00000 00000 000000000000 000001000000 001111 55555555
Q ss_pred -CCCHHHHHHHhh-ccCcceeeCCcccccccccccCCCCCCCCCCCCcccccccccccccCCCCeEEEEecCcccCCCHH
Q 011531 231 -EIEAPVVSLLGS-HFTKIYTIGPLHELRKSRMKDINSPSVSSSGILQTEDTSCMTWLNSQPPKSVLYVSFGSLVGLTRE 308 (483)
Q Consensus 231 -~l~~~~~~~~~~-~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vi~vs~Gs~~~~~~~ 308 (483)
.++++ .. +..++.++||...... +..+|....+++++|||++||......+
T Consensus 211 ~~~~~~-----~~~~~~~~~~vGp~~~~~~----------------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~ 263 (415)
T 3rsc_A 211 KAFQIA-----GDTFDDRFVFVGPCFDDRR----------------------FLGEWTRPADDLPVVLVSLGTTFNDRPG 263 (415)
T ss_dssp TTTSTT-----GGGCCTTEEECCCCCCCCG----------------------GGCCCCCCSSCCCEEEEECTTTSCCCHH
T ss_pred cccCCC-----cccCCCceEEeCCCCCCcc----------------------cCcCccccCCCCCEEEEECCCCCCChHH
Confidence 66654 33 3467899998754211 1223555456788999999999877778
Q ss_pred HHHHHHHHHHhCCCeEEEEEcCCccCCCCCCCCCChhhhhhcCCCceeEEeccCHHHHhccCCccceeeccCchhHHHHH
Q 011531 309 QMSELWHGLVNRGQRFLLVVRPDLILGEPGAAETPLAQNEGTEERNRFIVSWAPQEEVLAHPAVGGFLTHGGWNSTLEGI 388 (483)
Q Consensus 309 ~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~ItHgG~gs~~eal 388 (483)
.+..++++++..+.+++|.+... ...+.+ +..++| +.+.+|+|+.++|+++++ +|||||.||+.||+
T Consensus 264 ~~~~~~~al~~~~~~~v~~~g~~---------~~~~~l-~~~~~~-v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~ 330 (415)
T 3rsc_A 264 FFRDCARAFDGQPWHVVMTLGGQ---------VDPAAL-GDLPPN-VEAHRWVPHVKVLEQATV--CVTHGGMGTLMEAL 330 (415)
T ss_dssp HHHHHHHHHTTSSCEEEEECTTT---------SCGGGG-CCCCTT-EEEESCCCHHHHHHHEEE--EEESCCHHHHHHHH
T ss_pred HHHHHHHHHhcCCcEEEEEeCCC---------CChHHh-cCCCCc-EEEEecCCHHHHHhhCCE--EEECCcHHHHHHHH
Confidence 88999999999888999888421 011111 124455 999999999999988776 99999999999999
Q ss_pred HhCCceeccccccchhHHHHHHHHhhccceecC-CCCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCChHH
Q 011531 389 AAGVPMICWPQFSDQLVNSRCVSEVWKIGFDMK-DTCDGSIIEKLVRDLMENKREEIMGSTDRVATMARDAVNEGGSSYR 467 (483)
Q Consensus 389 ~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~-~~~~~~~l~~~i~~ll~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~ 467 (483)
++|+|+|++|...||+.||+++++ .|+|..+. ++++.+.|.++|.++|+| ++++++++++++.+.+. ++ ..
T Consensus 331 ~~G~P~v~~p~~~~q~~~a~~l~~-~g~g~~~~~~~~~~~~l~~~i~~ll~~--~~~~~~~~~~~~~~~~~----~~-~~ 402 (415)
T 3rsc_A 331 YWGRPLVVVPQSFDVQPMARRVDQ-LGLGAVLPGEKADGDTLLAAVGAVAAD--PALLARVEAMRGHVRRA----GG-AA 402 (415)
T ss_dssp HTTCCEEECCCSGGGHHHHHHHHH-HTCEEECCGGGCCHHHHHHHHHHHHTC--HHHHHHHHHHHHHHHHS----CH-HH
T ss_pred HhCCCEEEeCCcchHHHHHHHHHH-cCCEEEcccCCCCHHHHHHHHHHHHcC--HHHHHHHHHHHHHHHhc----CH-HH
Confidence 999999999999999999999975 89999998 678999999999999999 89999999999999873 33 33
Q ss_pred HHHHHHHHH
Q 011531 468 NLDGLIEDI 476 (483)
Q Consensus 468 ~~~~l~~~l 476 (483)
.+.+.++++
T Consensus 403 ~~~~~i~~~ 411 (415)
T 3rsc_A 403 RAADAVEAY 411 (415)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 444444444
No 11
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=6.1e-39 Score=321.43 Aligned_cols=374 Identities=15% Similarity=0.114 Sum_probs=240.7
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCCCchhhhhhccccccccCCCCCeEEEeCCCCCCCCcccCCCCHH
Q 011531 8 PHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTDHNHDLLLRNTDITSFCNRFPNFQFRSIPSGLPANVIRSGLTAK 87 (483)
Q Consensus 8 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~~~p~~l~~~~~~~~~~~~ 87 (483)
|||+|++.++.||++|+++||++|+++||+|++++++...+.+... ++.|..++...............
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~~-----------g~~~~~l~~~~~~~~~~~~~~~~ 69 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAEV-----------GVPMVPVGRAVRAGAREPGELPP 69 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHHT-----------TCCEEECSSCSSGGGSCTTCCCT
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc-----------CCceeecCCCHHHHhccccCCHH
Confidence 7899999999999999999999999999999999996655554433 47888887543211000000000
Q ss_pred HHHHHHHHhchHHHHHHHHHhhhhhcCCCCccEEEEcCCCCcch---HHHHHHcCCCeEEEecchhHHHHHHHh-hhhhh
Q 011531 88 DVFDAMKAVSKPAFRDLLISLREETEQRQSPTCVIADGILCFLT---LDVSEELQIPLLALRTHNASYSWIYFL-LPKLV 163 (483)
Q Consensus 88 ~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~D~VI~D~~~~~~~---~~~A~~lgIP~v~~~~~~~~~~~~~~~-~~~~~ 163 (483)
.....+.......+.++.+.+ .+||+||+|..... + ..+|+++|||++.+...+......... .....
T Consensus 70 ~~~~~~~~~~~~~~~~l~~~~-------~~pD~Vi~~~~~~~-~~~a~~~A~~lgiP~v~~~~~p~~~~~~~~~~~~~~~ 141 (404)
T 3h4t_A 70 GAAEVVTEVVAEWFDKVPAAI-------EGCDAVVTTGLLPA-AVAVRSMAEKLGIPYRYTVLSPDHLPSEQSQAERDMY 141 (404)
T ss_dssp TCGGGHHHHHHHHHHHHHHHH-------TTCSEEEEEECHHH-HHHHHHHHHHHTCCEEEEESSGGGSGGGSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHh-------cCCCEEEECCchhh-hhhhhhHHhhcCCCEEEEEcCCccCCChhHHHHHHHH
Confidence 011111111222223333332 36999999976554 4 789999999999987765421000000 00000
Q ss_pred hCCCCCCCCCCCCCCccccCCCCCCcc-CCCCCCccccCCCCChHHHHHHHHHhhhcccccEEEEecC-CCCHHHHHHHh
Q 011531 164 EDGHIPFPDENMEKPVAGIPGFENFLR-NRDLPGTCRVKTSDDDYLLQFFIGETFAMTRASALILNTF-EIEAPVVSLLG 241 (483)
Q Consensus 164 ~~~~~p~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~-~l~~~~~~~~~ 241 (483)
+. . ....+....+..+ ...++. ..+ ... . ...+..+++.. .+.+. +
T Consensus 142 ~~--------~---~~~~~~~~~~~~~~~lgl~~-------~~~-~~~----~----~~~~~~l~~~~~~l~p~-----~ 189 (404)
T 3h4t_A 142 NQ--------G---ADRLFGDAVNSHRASIGLPP-------VEH-LYD----Y----GYTDQPWLAADPVLSPL-----R 189 (404)
T ss_dssp HH--------H---HHHHHHHHHHHHHHHTTCCC-------CCC-HHH----H----HHCSSCEECSCTTTSCC-----C
T ss_pred HH--------H---HHHHhHHHHHHHHHHcCCCC-------Ccc-hhh----c----cccCCeEEeeCcceeCC-----C
Confidence 00 0 0000000000000 000000 000 000 0 01122345555 55554 4
Q ss_pred hccCcceeeCCcccccccccccCCCCCCCCCCCCcccccccccccccCCCCeEEEEecCcccCCCHHHHHHHHHHHHhCC
Q 011531 242 SHFTKIYTIGPLHELRKSRMKDINSPSVSSSGILQTEDTSCMTWLNSQPPKSVLYVSFGSLVGLTREQMSELWHGLVNRG 321 (483)
Q Consensus 242 ~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vi~vs~Gs~~~~~~~~~~~~~~a~~~~~ 321 (483)
++.++++++|++..... +..++++.+|++. ++++|||++||+.. ..+.+..++++++..+
T Consensus 190 ~~~~~~~~~G~~~~~~~-----------------~~~~~~l~~~l~~--~~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~ 249 (404)
T 3h4t_A 190 PTDLGTVQTGAWILPDQ-----------------RPLSAELEGFLRA--GSPPVYVGFGSGPA-PAEAARVAIEAVRAQG 249 (404)
T ss_dssp TTCCSCCBCCCCCCCCC-----------------CCCCHHHHHHHHT--SSCCEEECCTTSCC-CTTHHHHHHHHHHHTT
T ss_pred CCCCCeEEeCccccCCC-----------------CCCCHHHHHHHhc--CCCeEEEECCCCCC-cHHHHHHHHHHHHhCC
Confidence 55578899998764321 1245567788873 46789999999987 6677888999999999
Q ss_pred CeEEEEEcCCccCCCCCCCCCChhhhhhcCCCceeEEeccCHHHHhccCCccceeeccCchhHHHHHHhCCceecccccc
Q 011531 322 QRFLLVVRPDLILGEPGAAETPLAQNEGTEERNRFIVSWAPQEEVLAHPAVGGFLTHGGWNSTLEGIAAGVPMICWPQFS 401 (483)
Q Consensus 322 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~ItHgG~gs~~eal~~GvP~l~~P~~~ 401 (483)
.++||+.+.... .... .++| +.+.+|+||.++|+++++ ||||||+||+.||+++|||+|++|+.+
T Consensus 250 ~~vv~~~g~~~~-------~~~~-----~~~~-v~~~~~~~~~~ll~~~d~--~v~~gG~~t~~Eal~~GvP~v~~p~~~ 314 (404)
T 3h4t_A 250 RRVVLSSGWAGL-------GRID-----EGDD-CLVVGEVNHQVLFGRVAA--VVHHGGAGTTTAVTRAGAPQVVVPQKA 314 (404)
T ss_dssp CCEEEECTTTTC-------CCSS-----CCTT-EEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCST
T ss_pred CEEEEEeCCccc-------cccc-----CCCC-EEEecCCCHHHHHhhCcE--EEECCcHHHHHHHHHcCCCEEEcCCcc
Confidence 999998843211 0111 2445 999999999999966555 999999999999999999999999999
Q ss_pred chhHHHHHHHHhhccceecC-CCCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 011531 402 DQLVNSRCVSEVWKIGFDMK-DTCDGSIIEKLVRDLMENKREEIMGSTDRVATMARDAVNEGGSSYRNLDGLIEDIR 477 (483)
Q Consensus 402 DQ~~na~~v~~~~G~G~~l~-~~~~~~~l~~~i~~ll~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~l~~~l~ 477 (483)
||+.||+++++ .|+|..++ .+++.+.|.++|.++|+ ++|+++++++++.+++ .....+.+.|+++.
T Consensus 315 dQ~~na~~~~~-~G~g~~l~~~~~~~~~l~~ai~~ll~---~~~~~~~~~~~~~~~~------~~~~~~~~~i~~~~ 381 (404)
T 3h4t_A 315 DQPYYAGRVAD-LGVGVAHDGPTPTVESLSAALATALT---PGIRARAAAVAGTIRT------DGTTVAAKLLLEAI 381 (404)
T ss_dssp THHHHHHHHHH-HTSEEECSSSSCCHHHHHHHHHHHTS---HHHHHHHHHHHTTCCC------CHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHH-CCCEeccCcCCCCHHHHHHHHHHHhC---HHHHHHHHHHHHHHhh------hHHHHHHHHHHHHH
Confidence 99999999965 89999998 78899999999999997 6799999999988753 22344445555443
No 12
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=6.4e-37 Score=306.60 Aligned_cols=383 Identities=17% Similarity=0.186 Sum_probs=249.2
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCCCchhhhhhccccccccCCCCCeEEEeCCCCCCCCcc---cCCC
Q 011531 8 PHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTDHNHDLLLRNTDITSFCNRFPNFQFRSIPSGLPANVI---RSGL 84 (483)
Q Consensus 8 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~~~p~~l~~~~~---~~~~ 84 (483)
+||+|+++++.||++|++.||++|+++||+|++++++.+.+.+.+. ++.|..++..++.... ....
T Consensus 5 ~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~-----------G~~~~~~~~~~~~~~~~~~~~~~ 73 (402)
T 3ia7_A 5 RHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKAA-----------GAEVVLYKSEFDTFHVPEVVKQE 73 (402)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHT-----------TCEEEECCCGGGTSSSSSSSCCT
T ss_pred CEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHHc-----------CCEEEeccccccccccccccccc
Confidence 4999999999999999999999999999999999986665555443 4888888754332211 1222
Q ss_pred CHHHHHHH-HHHhchHHHHHHHHHhhhhhcCCCCccEEEEc-CCCCcchHHHHHHcCCCeEEEecchhHHHHHHHhhhhh
Q 011531 85 TAKDVFDA-MKAVSKPAFRDLLISLREETEQRQSPTCVIAD-GILCFLTLDVSEELQIPLLALRTHNASYSWIYFLLPKL 162 (483)
Q Consensus 85 ~~~~~~~~-~~~~~~~~~~~ll~~~~~~~~~~~~~D~VI~D-~~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~ 162 (483)
.....+.. +.......+.++.+.+++ .+||+||+| ....+ +..+|+++|||++.+.+....... +...+..
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~l~~~l~~-----~~pD~Vi~d~~~~~~-~~~aA~~~giP~v~~~~~~~~~~~-~~~~~~~ 146 (402)
T 3ia7_A 74 DAETQLHLVYVRENVAILRAAEEALGD-----NPPDLVVYDVFPFIA-GRLLAARWDRPAVRLTGGFAANEH-YSLFKEL 146 (402)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHTT-----CCCSEEEEESTTHHH-HHHHHHHHTCCEEEEESSCCCBTT-BCHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhc-----cCCCEEEECchHHHH-HHHHHHhhCCCEEEEecccccCcc-ccccccc
Confidence 33333333 333233334445555543 789999999 77778 899999999999998654321000 0000000
Q ss_pred hhCCCCCCCCCCCCCCccccCCCCCCccCCCCCCccccCCCCChHHHHHHHHHhhhcccc-cEEEEecC-CCCHHHHHHH
Q 011531 163 VEDGHIPFPDENMEKPVAGIPGFENFLRNRDLPGTCRVKTSDDDYLLQFFIGETFAMTRA-SALILNTF-EIEAPVVSLL 240 (483)
Q Consensus 163 ~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~s~-~l~~~~~~~~ 240 (483)
.+... ... ...+. . +. ..+..+... ..... ....+ .... +..++... +++++
T Consensus 147 ~~~~~--~~~------~~~~~---~-~~-~~~~~~~~~-~g~~~-~~~~~------~~~~~~~~l~~~~~~~~~~----- 200 (402)
T 3ia7_A 147 WKSNG--QRH------PADVE---A-VH-SVLVDLLGK-YGVDT-PVKEY------WDEIEGLTIVFLPKSFQPF----- 200 (402)
T ss_dssp HHHHT--CCC------GGGSH---H-HH-HHHHHHHHT-TTCCS-CHHHH------HTCCCSCEEESSCGGGSTT-----
T ss_pred ccccc--ccC------hhhHH---H-HH-HHHHHHHHH-cCCCC-Chhhh------hcCCCCeEEEEcChHhCCc-----
Confidence 00000 000 00000 0 00 000000000 00000 00000 0111 34444444 55443
Q ss_pred hh-ccCcceeeCCcccccccccccCCCCCCCCCCCCcccccccccccccCCCCeEEEEecCcccCCCHHHHHHHHHHHHh
Q 011531 241 GS-HFTKIYTIGPLHELRKSRMKDINSPSVSSSGILQTEDTSCMTWLNSQPPKSVLYVSFGSLVGLTREQMSELWHGLVN 319 (483)
Q Consensus 241 ~~-~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vi~vs~Gs~~~~~~~~~~~~~~a~~~ 319 (483)
.. +..++.++||...... ...+|....+++++|||++||......+.+..++++++.
T Consensus 201 ~~~~~~~~~~vGp~~~~~~----------------------~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~ 258 (402)
T 3ia7_A 201 AETFDERFAFVGPTLTGRD----------------------GQPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFAD 258 (402)
T ss_dssp GGGCCTTEEECCCCCCC--------------------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTT
T ss_pred cccCCCCeEEeCCCCCCcc----------------------cCCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhc
Confidence 33 3467899998754211 112355445678899999999988777888999999999
Q ss_pred CCCeEEEEEcCCccCCCCCCCCCChhhhhhcCCCceeEEeccCHHHHhccCCccceeeccCchhHHHHHHhCCceecccc
Q 011531 320 RGQRFLLVVRPDLILGEPGAAETPLAQNEGTEERNRFIVSWAPQEEVLAHPAVGGFLTHGGWNSTLEGIAAGVPMICWPQ 399 (483)
Q Consensus 320 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~ItHgG~gs~~eal~~GvP~l~~P~ 399 (483)
.+.+++|+++.. ...+.+ +..++| +.+.+|+|+.++|+++++ +|||||.||+.||+++|+|+|++|.
T Consensus 259 ~~~~~~~~~g~~---------~~~~~~-~~~~~~-v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~ 325 (402)
T 3ia7_A 259 TPWHVVMAIGGF---------LDPAVL-GPLPPN-VEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAGVPLVLVPH 325 (402)
T ss_dssp SSCEEEEECCTT---------SCGGGG-CSCCTT-EEEESCCCHHHHHTTEEE--EEECCCHHHHHHHHHTTCCEEECGG
T ss_pred CCcEEEEEeCCc---------CChhhh-CCCCCc-EEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCC
Confidence 888888887421 011111 124555 999999999999977776 9999999999999999999999999
Q ss_pred -ccchhHHHHHHHHhhccceecC-CCCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 011531 400 -FSDQLVNSRCVSEVWKIGFDMK-DTCDGSIIEKLVRDLMENKREEIMGSTDRVATMARDAVNEGGSSYRNLDGLIEDIR 477 (483)
Q Consensus 400 -~~DQ~~na~~v~~~~G~G~~l~-~~~~~~~l~~~i~~ll~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~l~~~l~ 477 (483)
..||+.||+++++ .|+|..+. +.++.+.|.++|.++|+| ++++++++++++.+.+ +++ ...+.+.++++.
T Consensus 326 ~~~~q~~~a~~~~~-~g~g~~~~~~~~~~~~l~~~~~~ll~~--~~~~~~~~~~~~~~~~----~~~-~~~~~~~i~~~~ 397 (402)
T 3ia7_A 326 FATEAAPSAERVIE-LGLGSVLRPDQLEPASIREAVERLAAD--SAVRERVRRMQRDILS----SGG-PARAADEVEAYL 397 (402)
T ss_dssp GCGGGHHHHHHHHH-TTSEEECCGGGCSHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHT----SCH-HHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHH-cCCEEEccCCCCCHHHHHHHHHHHHcC--HHHHHHHHHHHHHHhh----CCh-HHHHHHHHHHHH
Confidence 9999999999975 89999998 688999999999999999 8999999999998876 333 344444555443
No 13
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=6.8e-38 Score=317.66 Aligned_cols=375 Identities=13% Similarity=0.105 Sum_probs=236.1
Q ss_pred CCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCCCchhhhhhccccccccCCCCCeEEEeCCCCCCC-Cc-----
Q 011531 6 VNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTDHNHDLLLRNTDITSFCNRFPNFQFRSIPSGLPA-NV----- 79 (483)
Q Consensus 6 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~~~p~~l~~-~~----- 79 (483)
..|||+|+++++.||++|+++||++|+++||+|++++++...+.+... ++.|+.++...+. +.
T Consensus 19 ~~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~~-----------G~~~~~i~~~~~~~~~~~~~~ 87 (441)
T 2yjn_A 19 SHMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITAA-----------GLTAVPVGTDVDLVDFMTHAG 87 (441)
T ss_dssp CCCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHTT-----------TCCEEECSCCCCHHHHHHHTT
T ss_pred CccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHhC-----------CCceeecCCccchHHHhhhhh
Confidence 458999999999999999999999999999999999997654444332 4888888854311 00
Q ss_pred ---------cc-----CC-CCHH---HHHHHHHHhch-----H-HHHHHHHHhhhhhcCCCCccEEEEcCCCCcchHHHH
Q 011531 80 ---------IR-----SG-LTAK---DVFDAMKAVSK-----P-AFRDLLISLREETEQRQSPTCVIADGILCFLTLDVS 135 (483)
Q Consensus 80 ---------~~-----~~-~~~~---~~~~~~~~~~~-----~-~~~~ll~~~~~~~~~~~~~D~VI~D~~~~~~~~~~A 135 (483)
.. .. .... ..+..+...+. . .+.++++.+++ .+||+||+|....+ +..+|
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~pDlVv~d~~~~~-~~~aA 161 (441)
T 2yjn_A 88 HDIIDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRK-----WRPDLVIWEPLTFA-APIAA 161 (441)
T ss_dssp HHHHHHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHH-----HCCSEEEECTTCTH-HHHHH
T ss_pred cccccccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHh-----cCCCEEEecCcchh-HHHHH
Confidence 00 00 0111 11111221111 2 55566655554 68999999997777 99999
Q ss_pred HHcCCCeEEEecchhHHHHHHHhhhhhhhCCCCCCCCCCCCCCccccCCCCCCccCCCCCCccccCCCCChHHHHHHHHH
Q 011531 136 EELQIPLLALRTHNASYSWIYFLLPKLVEDGHIPFPDENMEKPVAGIPGFENFLRNRDLPGTCRVKTSDDDYLLQFFIGE 215 (483)
Q Consensus 136 ~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (483)
+.+|||++.+...+.........+.. ..++.|... ..+ .....+......
T Consensus 162 ~~lgiP~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~------------~~~----------------~~~~~l~~~~~~ 211 (441)
T 2yjn_A 162 AVTGTPHARLLWGPDITTRARQNFLG--LLPDQPEEH------------RED----------------PLAEWLTWTLEK 211 (441)
T ss_dssp HHHTCCEEEECSSCCHHHHHHHHHHH--HGGGSCTTT------------CCC----------------HHHHHHHHHHHH
T ss_pred HHcCCCEEEEecCCCcchhhhhhhhh--hcccccccc------------ccc----------------hHHHHHHHHHHH
Confidence 99999999986544322111000000 011111000 000 000011111111
Q ss_pred hhh------cccccEEEEecC-CCCHHHHHHHhhcc-CcceeeCCcccccccccccCCCCCCCCCCCCcccccccccccc
Q 011531 216 TFA------MTRASALILNTF-EIEAPVVSLLGSHF-TKIYTIGPLHELRKSRMKDINSPSVSSSGILQTEDTSCMTWLN 287 (483)
Q Consensus 216 ~~~------~~~~~~~l~~s~-~l~~~~~~~~~~~~-~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 287 (483)
... ....+..+..+. .++++ ..++ ..+.+++. ..+.++.+|++
T Consensus 212 ~g~~~~~~~~~~~~~~l~~~~~~~~~~-----~~~~~~~~~~~~~------------------------~~~~~~~~~l~ 262 (441)
T 2yjn_A 212 YGGPAFDEEVVVGQWTIDPAPAAIRLD-----TGLKTVGMRYVDY------------------------NGPSVVPEWLH 262 (441)
T ss_dssp TTCCCCCGGGTSCSSEEECSCGGGSCC-----CCCCEEECCCCCC------------------------CSSCCCCGGGS
T ss_pred cCCCCCCccccCCCeEEEecCccccCC-----CCCCCCceeeeCC------------------------CCCcccchHhh
Confidence 100 001223333333 23221 1111 01111110 11233567887
Q ss_pred cCCCCeEEEEecCcccCC---CHHHHHHHHHHHHhCCCeEEEEEcCCccCCCCCCCCCChhhhhhcCCCceeEEeccCHH
Q 011531 288 SQPPKSVLYVSFGSLVGL---TREQMSELWHGLVNRGQRFLLVVRPDLILGEPGAAETPLAQNEGTEERNRFIVSWAPQE 364 (483)
Q Consensus 288 ~~~~~~vi~vs~Gs~~~~---~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~ 364 (483)
..+++++|||++||.... ..+.+..++++++..+.+++|+....... .+. ..++| +.+.+|+||.
T Consensus 263 ~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~------~l~-----~~~~~-v~~~~~~~~~ 330 (441)
T 2yjn_A 263 DEPERRRVCLTLGISSRENSIGQVSIEELLGAVGDVDAEIIATFDAQQLE------GVA-----NIPDN-VRTVGFVPMH 330 (441)
T ss_dssp SCCSSCEEEEEC----------CCSTTTTHHHHHTSSSEEEECCCTTTTS------SCS-----SCCSS-EEECCSCCHH
T ss_pred cCCCCCEEEEECCCCcccccChHHHHHHHHHHHHcCCCEEEEEECCcchh------hhc-----cCCCC-EEEecCCCHH
Confidence 666778999999998864 33456778899988899999988432110 111 13455 9999999999
Q ss_pred HHhccCCccceeeccCchhHHHHHHhCCceeccccccchhHHHHHHHHhhccceecC-CCCCHHHHHHHHHHHHhHhHHH
Q 011531 365 EVLAHPAVGGFLTHGGWNSTLEGIAAGVPMICWPQFSDQLVNSRCVSEVWKIGFDMK-DTCDGSIIEKLVRDLMENKREE 443 (483)
Q Consensus 365 ~ll~~~~~~~~ItHgG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~-~~~~~~~l~~~i~~ll~~~~~~ 443 (483)
++|+.+++ ||||||+||++||+++|||+|++|...||+.||+++++ .|+|+.++ ++++.+.|.++|.++|+| ++
T Consensus 331 ~ll~~ad~--~V~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~-~g~g~~~~~~~~~~~~l~~~i~~ll~~--~~ 405 (441)
T 2yjn_A 331 ALLPTCAA--TVHHGGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQE-FGAGIALPVPELTPDQLRESVKRVLDD--PA 405 (441)
T ss_dssp HHGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHH-HTSEEECCTTTCCHHHHHHHHHHHHHC--HH
T ss_pred HHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHH-cCCEEEcccccCCHHHHHHHHHHHhcC--HH
Confidence 99966555 99999999999999999999999999999999999975 89999998 678999999999999998 89
Q ss_pred HHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHH
Q 011531 444 IMGSTDRVATMARDAVNEGGSSYRNLDGLIEDIRL 478 (483)
Q Consensus 444 ~~~~a~~l~~~~~~~~~~gg~~~~~~~~l~~~l~~ 478 (483)
++++++++++.+.+. ++ ...+.+.|+++..
T Consensus 406 ~~~~~~~~~~~~~~~---~~--~~~~~~~i~~~~~ 435 (441)
T 2yjn_A 406 HRAGAARMRDDMLAE---PS--PAEVVGICEELAA 435 (441)
T ss_dssp HHHHHHHHHHHHHTS---CC--HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcC---CC--HHHHHHHHHHHHH
Confidence 999999999998763 33 4455556666543
No 14
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=2.9e-36 Score=304.80 Aligned_cols=377 Identities=15% Similarity=0.172 Sum_probs=242.0
Q ss_pred CCCCCCCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCCCchhhhhhccccccccCCCCCeEEEeCCCCCCCCcc
Q 011531 1 MERSHVNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTDHNHDLLLRNTDITSFCNRFPNFQFRSIPSGLPANVI 80 (483)
Q Consensus 1 ~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~~~p~~l~~~~~ 80 (483)
|++..+.+||+|++.++.||++|++.|+++|+++||+|++++++...+.+.+. +++++.++..++....
T Consensus 1 M~~~m~m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~~-----------g~~~~~~~~~~~~~~~ 69 (430)
T 2iyf_A 1 MTTQTTPAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAAT-----------GPRPVLYHSTLPGPDA 69 (430)
T ss_dssp -------CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHTT-----------SCEEEECCCCSCCTTS
T ss_pred CCCccccceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHhC-----------CCEEEEcCCcCccccc
Confidence 66666668999999999999999999999999999999999997654444332 4888888865432211
Q ss_pred c---CCCCHHHHHHHHHHhchHHHHHHHHHhhhhhcCCCCccEEEEcCCCCcchHHHHHHcCCCeEEEecchhHHHHHHH
Q 011531 81 R---SGLTAKDVFDAMKAVSKPAFRDLLISLREETEQRQSPTCVIADGILCFLTLDVSEELQIPLLALRTHNASYSWIYF 157 (483)
Q Consensus 81 ~---~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~D~VI~D~~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~ 157 (483)
. ...+....+..+...+...+..+.+.+++ .+||+||+|.+.++ +..+|+.+|||++.+++.+........
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----~~pD~Vi~d~~~~~-~~~~A~~~giP~v~~~~~~~~~~~~~~ 143 (430)
T 2iyf_A 70 DPEAWGSTLLDNVEPFLNDAIQALPQLADAYAD-----DIPDLVLHDITSYP-ARVLARRWGVPAVSLSPNLVAWKGYEE 143 (430)
T ss_dssp CGGGGCSSHHHHHHHHHHHHHHHHHHHHHHHTT-----SCCSEEEEETTCHH-HHHHHHHHTCCEEEEESSCCCCTTHHH
T ss_pred cccccchhhHHHHHHHHHHHHHHHHHHHHHhhc-----cCCCEEEECCccHH-HHHHHHHcCCCEEEEeccccccccccc
Confidence 0 11233333322222222333444444443 68999999987777 899999999999998765421000000
Q ss_pred hhhhhhhCCCCCCCCCCCCCCccccCCCCCCccCCCCCCccccCCCCChHHHHHHHHHhhhcccccEEEEecC-CCCHHH
Q 011531 158 LLPKLVEDGHIPFPDENMEKPVAGIPGFENFLRNRDLPGTCRVKTSDDDYLLQFFIGETFAMTRASALILNTF-EIEAPV 236 (483)
Q Consensus 158 ~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~-~l~~~~ 236 (483)
....+... .....++... +. ..+..++.. ........ ......+.+++++. .++++.
T Consensus 144 ~~~~~~~~------------~~~~~~~~~~-~~-~~~~~~~~~-~g~~~~~~-------~~~~~~~~~l~~~~~~~~~~~ 201 (430)
T 2iyf_A 144 EVAEPMWR------------EPRQTERGRA-YY-ARFEAWLKE-NGITEHPD-------TFASHPPRSLVLIPKALQPHA 201 (430)
T ss_dssp HTHHHHHH------------HHHHSHHHHH-HH-HHHHHHHHH-TTCCSCHH-------HHHHCCSSEEECSCGGGSTTG
T ss_pred ccccchhh------------hhccchHHHH-HH-HHHHHHHHH-hCCCCCHH-------HHhcCCCcEEEeCcHHhCCCc
Confidence 00000000 0000000000 00 000000000 00000000 01124567888888 776541
Q ss_pred HHHHhhccCc-ceeeCCcccccccccccCCCCCCCCCCCCcccccccccccccCCCCeEEEEecCcccCCCHHHHHHHHH
Q 011531 237 VSLLGSHFTK-IYTIGPLHELRKSRMKDINSPSVSSSGILQTEDTSCMTWLNSQPPKSVLYVSFGSLVGLTREQMSELWH 315 (483)
Q Consensus 237 ~~~~~~~~~~-~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vi~vs~Gs~~~~~~~~~~~~~~ 315 (483)
+.+.++ +++||+...... ...+|....+++++||+++||......+.+..+++
T Consensus 202 ----~~~~~~~v~~vG~~~~~~~----------------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~ 255 (430)
T 2iyf_A 202 ----DRVDEDVYTFVGACQGDRA----------------------EEGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVR 255 (430)
T ss_dssp ----GGSCTTTEEECCCCC---------------------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHH
T ss_pred ----ccCCCccEEEeCCcCCCCC----------------------CCCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHH
Confidence 344467 999998543211 01235554556789999999998656778888999
Q ss_pred HHHhC-CCeEEEEEcCCccCCCCCCCCCChhhhhhcCCCceeEEeccCHHHHhccCCccceeeccCchhHHHHHHhCCce
Q 011531 316 GLVNR-GQRFLLVVRPDLILGEPGAAETPLAQNEGTEERNRFIVSWAPQEEVLAHPAVGGFLTHGGWNSTLEGIAAGVPM 394 (483)
Q Consensus 316 a~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~ItHgG~gs~~eal~~GvP~ 394 (483)
+++.. +.+++|+++.. . ..+.+ +..++| +.+.+|+||.++|+++++ ||||||+||+.||+++|+|+
T Consensus 256 ~l~~~~~~~~~~~~G~~--------~-~~~~l-~~~~~~-v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~ 322 (430)
T 2iyf_A 256 AFGNLPGWHLVLQIGRK--------V-TPAEL-GELPDN-VEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPM 322 (430)
T ss_dssp HHTTCTTEEEEEECC------------CGGGG-CSCCTT-EEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCE
T ss_pred HHhcCCCeEEEEEeCCC--------C-ChHHh-ccCCCC-eEEEecCCHHHHhhccCE--EEECCCccHHHHHHHhCCCE
Confidence 99885 77888888421 0 11112 123455 999999999999988887 99999999999999999999
Q ss_pred eccccccchhHHHHHHHHhhccceecC-CCCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHH
Q 011531 395 ICWPQFSDQLVNSRCVSEVWKIGFDMK-DTCDGSIIEKLVRDLMENKREEIMGSTDRVATMARDA 458 (483)
Q Consensus 395 l~~P~~~DQ~~na~~v~~~~G~G~~l~-~~~~~~~l~~~i~~ll~~~~~~~~~~a~~l~~~~~~~ 458 (483)
|++|..+||..|++++++ .|+|+.++ +.++.+.|.++|.++|+| ++++++++++++.+.+.
T Consensus 323 i~~p~~~~q~~~a~~~~~-~g~g~~~~~~~~~~~~l~~~i~~ll~~--~~~~~~~~~~~~~~~~~ 384 (430)
T 2iyf_A 323 IAVPQAVDQFGNADMLQG-LGVARKLATEEATADLLRETALALVDD--PEVARRLRRIQAEMAQE 384 (430)
T ss_dssp EECCCSHHHHHHHHHHHH-TTSEEECCCC-CCHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHH
T ss_pred EECCCccchHHHHHHHHH-cCCEEEcCCCCCCHHHHHHHHHHHHcC--HHHHHHHHHHHHHHHhc
Confidence 999999999999999975 89999998 678999999999999998 88999999999888764
No 15
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=6.7e-37 Score=304.76 Aligned_cols=359 Identities=13% Similarity=0.137 Sum_probs=242.4
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCCCchhhhhhccccccccCCCCCeEEEeCCCCCCCCc-------c
Q 011531 8 PHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTDHNHDLLLRNTDITSFCNRFPNFQFRSIPSGLPANV-------I 80 (483)
Q Consensus 8 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~~~p~~l~~~~-------~ 80 (483)
|||++++.++.||++|+++|+++|+++||+|++++++...+.+... ++.++.++....... .
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~-----------g~~~~~~~~~~~~~~~~~~~~~~ 69 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTGV-----------GLPAVATTDLPIRHFITTDREGR 69 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHT-----------TCCEEESCSSCHHHHHHBCTTSC
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHhC-----------CCEEEEeCCcchHHHHhhhcccC
Confidence 6999999999999999999999999999999999986544433332 477887775321000 0
Q ss_pred c-CC-CC--HHHHH-HH-HHHhchHHHHHHHHHhhhhhcCCCCccEEEEcCCCCcchHHHHHHcCCCeEEEecchhHHHH
Q 011531 81 R-SG-LT--AKDVF-DA-MKAVSKPAFRDLLISLREETEQRQSPTCVIADGILCFLTLDVSEELQIPLLALRTHNASYSW 154 (483)
Q Consensus 81 ~-~~-~~--~~~~~-~~-~~~~~~~~~~~ll~~~~~~~~~~~~~D~VI~D~~~~~~~~~~A~~lgIP~v~~~~~~~~~~~ 154 (483)
. .. .. ....+ .. +.......+.++.+.+++ .+||+||+|.+..+ +..+|+.+|||++.+...+..
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----~~pD~Vi~~~~~~~-~~~~a~~~giP~v~~~~~~~~--- 140 (384)
T 2p6p_A 70 PEAIPSDPVAQARFTGRWFARMAASSLPRMLDFSRA-----WRPDLIVGGTMSYV-APLLALHLGVPHARQTWDAVD--- 140 (384)
T ss_dssp BCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HCCSEEEEETTCTH-HHHHHHHHTCCEEEECCSSCC---
T ss_pred ccccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHhc-----cCCcEEEECcchhh-HHHHHHhcCCCEEEeccCCcc---
Confidence 0 00 11 11111 11 111122234444444443 58999999988777 889999999999987532110
Q ss_pred HHHhhhhhhhCCCCCCCCCCCCCCccccCCCCCCccCCCCCCccccCCCCChHHHHHHHHHhh--hcccccEEEEecC-C
Q 011531 155 IYFLLPKLVEDGHIPFPDENMEKPVAGIPGFENFLRNRDLPGTCRVKTSDDDYLLQFFIGETF--AMTRASALILNTF-E 231 (483)
Q Consensus 155 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~s~-~ 231 (483)
+ . . +. ... ....+....... .....+.+++++. .
T Consensus 141 --------------~---~-------------~-~~-----~~~-------~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ 177 (384)
T 2p6p_A 141 --------------A---D-------------G-IH-----PGA-------DAELRPELSELGLERLPAPDLFIDICPPS 177 (384)
T ss_dssp --------------C---T-------------T-TH-----HHH-------HHHTHHHHHHTTCSSCCCCSEEEECSCGG
T ss_pred --------------c---c-------------h-hh-----HHH-------HHHHHHHHHHcCCCCCCCCCeEEEECCHH
Confidence 0 0 0 00 000 000011111110 0011457788887 6
Q ss_pred CCHHHHHHHhhcc-CcceeeCCcccccccccccCCCCCCCCCCCCcccccccccccccCCCCeEEEEecCcccCC-----
Q 011531 232 IEAPVVSLLGSHF-TKIYTIGPLHELRKSRMKDINSPSVSSSGILQTEDTSCMTWLNSQPPKSVLYVSFGSLVGL----- 305 (483)
Q Consensus 232 l~~~~~~~~~~~~-~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vi~vs~Gs~~~~----- 305 (483)
++++ .++. +++.+++. . .+.++.+|++..+++++|||++||....
T Consensus 178 ~~~~-----~~~~~~~~~~~~~-~-----------------------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~ 228 (384)
T 2p6p_A 178 LRPA-----NAAPARMMRHVAT-S-----------------------RQCPLEPWMYTRDTRQRVLVTSGSRVAKESYDR 228 (384)
T ss_dssp GSCT-----TSCCCEECCCCCC-C-----------------------CCCBCCHHHHCCCSSCEEEEECSSSSSCCSSCC
T ss_pred HCCC-----CCCCCCceEecCC-C-----------------------CCCCCCchhhcCCCCCEEEEECCCCCccccccc
Confidence 6554 2222 23334321 0 0123456887556678999999999864
Q ss_pred CHHHHHHHHHHHHhCCCeEEEEEcCCccCCCCCCCCCChhhhhhcCCCceeEEeccCHHHHhccCCccceeeccCchhHH
Q 011531 306 TREQMSELWHGLVNRGQRFLLVVRPDLILGEPGAAETPLAQNEGTEERNRFIVSWAPQEEVLAHPAVGGFLTHGGWNSTL 385 (483)
Q Consensus 306 ~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~ItHgG~gs~~ 385 (483)
+.+.+..++++++..+.+++|+.+ +. ..+.+. ..++| +.+ +|+||.++|+++++ ||||||+||+.
T Consensus 229 ~~~~~~~~~~al~~~~~~~~~~~g--------~~--~~~~l~-~~~~~-v~~-~~~~~~~~l~~~d~--~v~~~G~~t~~ 293 (384)
T 2p6p_A 229 NFDFLRGLAKDLVRWDVELIVAAP--------DT--VAEALR-AEVPQ-ARV-GWTPLDVVAPTCDL--LVHHAGGVSTL 293 (384)
T ss_dssp CCTTHHHHHHHHHTTTCEEEEECC--------HH--HHHHHH-HHCTT-SEE-ECCCHHHHGGGCSE--EEECSCTTHHH
T ss_pred cHHHHHHHHHHHhcCCcEEEEEeC--------CC--CHHhhC-CCCCc-eEE-cCCCHHHHHhhCCE--EEeCCcHHHHH
Confidence 456788899999988999999883 21 011121 24566 999 99999999966665 99999999999
Q ss_pred HHHHhCCceeccccccchhHHHHHHHHhhccceecC-CCCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCC
Q 011531 386 EGIAAGVPMICWPQFSDQLVNSRCVSEVWKIGFDMK-DTCDGSIIEKLVRDLMENKREEIMGSTDRVATMARDAVNEGGS 464 (483)
Q Consensus 386 eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~-~~~~~~~l~~~i~~ll~~~~~~~~~~a~~l~~~~~~~~~~gg~ 464 (483)
||+++|+|+|++|...||+.||+++++ .|+|+.++ +..+.+.|.++|.++|+| ++++++++++++.+++. +|
T Consensus 294 Ea~~~G~P~v~~p~~~dq~~~a~~~~~-~g~g~~~~~~~~~~~~l~~~i~~ll~~--~~~~~~~~~~~~~~~~~---~~- 366 (384)
T 2p6p_A 294 TGLSAGVPQLLIPKGSVLEAPARRVAD-YGAAIALLPGEDSTEAIADSCQELQAK--DTYARRAQDLSREISGM---PL- 366 (384)
T ss_dssp HHHHTTCCEEECCCSHHHHHHHHHHHH-HTSEEECCTTCCCHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHTS---CC-
T ss_pred HHHHhCCCEEEccCcccchHHHHHHHH-CCCeEecCcCCCCHHHHHHHHHHHHcC--HHHHHHHHHHHHHHHhC---CC-
Confidence 999999999999999999999999965 89999998 678999999999999998 89999999999999874 33
Q ss_pred hHHHHHHHHHHHHHhhh
Q 011531 465 SYRNLDGLIEDIRLMAR 481 (483)
Q Consensus 465 ~~~~~~~l~~~l~~~~~ 481 (483)
.+.+.+.|+.|.+-++
T Consensus 367 -~~~~~~~i~~~~~~~~ 382 (384)
T 2p6p_A 367 -PATVVTALEQLAHHHH 382 (384)
T ss_dssp -HHHHHHHHHHHHHHHC
T ss_pred -HHHHHHHHHHHhhhcc
Confidence 4555666666665443
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=1.4e-34 Score=289.39 Aligned_cols=349 Identities=15% Similarity=0.162 Sum_probs=212.1
Q ss_pred CCCCCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCCCchhhhhhccccccccCCCCCeEEEeCCCCCCCC----
Q 011531 3 RSHVNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTDHNHDLLLRNTDITSFCNRFPNFQFRSIPSGLPAN---- 78 (483)
Q Consensus 3 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~~~p~~l~~~---- 78 (483)
.++.+|||+|++.++.||++|++.|+++|+++||+|++++++...+.+... ++.+..++......
T Consensus 11 ~~~~~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~-----------G~~~~~~~~~~~~~~~~~ 79 (398)
T 4fzr_A 11 PRGSHMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTGA-----------GLPFAPTCPSLDMPEVLS 79 (398)
T ss_dssp ----CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHHT-----------TCCEEEEESSCCHHHHHS
T ss_pred CCCCceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHhC-----------CCeeEecCCccchHhhhh
Confidence 345669999999999999999999999999999999999986655555443 36666665311100
Q ss_pred ------cccCCCCHHHHH----HHHHHhchHHHHHHHHHhhhhhcCCCCccEEEEcCCCCcchHHHHHHcCCCeEEEecc
Q 011531 79 ------VIRSGLTAKDVF----DAMKAVSKPAFRDLLISLREETEQRQSPTCVIADGILCFLTLDVSEELQIPLLALRTH 148 (483)
Q Consensus 79 ------~~~~~~~~~~~~----~~~~~~~~~~~~~ll~~~~~~~~~~~~~D~VI~D~~~~~~~~~~A~~lgIP~v~~~~~ 148 (483)
............ ..+.......+.++.+.+++ ++||+|++|...++ +..+|+.+|||++.+...
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~pDlVv~d~~~~~-~~~~a~~~giP~v~~~~~ 153 (398)
T 4fzr_A 80 WDREGNRTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAER-----WKPDLVLTETYSLT-GPLVAATLGIPWIEQSIR 153 (398)
T ss_dssp BCTTSCBCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HCCSEEEEETTCTH-HHHHHHHHTCCEEEECCS
T ss_pred hhccCcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh-----CCCCEEEECccccH-HHHHHHhhCCCEEEeccC
Confidence 000001111111 11222222333344444443 68999999987787 899999999999987654
Q ss_pred hhHHHHHHHhhhhhhhCCCCCCCCCCCCCCccccCCCCCCccCCCCCCccccCCCCChHHHHHHHHHhhhcccccEEEEe
Q 011531 149 NASYSWIYFLLPKLVEDGHIPFPDENMEKPVAGIPGFENFLRNRDLPGTCRVKTSDDDYLLQFFIGETFAMTRASALILN 228 (483)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 228 (483)
............. .+...+....+. .....+..+..
T Consensus 154 ~~~~~~~~~~~~~----------------------~l~~~~~~~~~~----------------------~~~~~~~~~~~ 189 (398)
T 4fzr_A 154 LASPELIKSAGVG----------------------ELAPELAELGLT----------------------DFPDPLLSIDV 189 (398)
T ss_dssp SCCCHHHHHHHHH----------------------HTHHHHHTTTCS----------------------SCCCCSEEEEC
T ss_pred CCCchhhhHHHHH----------------------HHHHHHHHcCCC----------------------CCCCCCeEEEe
Confidence 3211000000000 000000000000 00111222322
Q ss_pred cC-CCCHHHHHHHhhcc-CcceeeCCcccccccccccCCCCCCCCCCCCcccccccccccccCCCCeEEEEecCcccCC-
Q 011531 229 TF-EIEAPVVSLLGSHF-TKIYTIGPLHELRKSRMKDINSPSVSSSGILQTEDTSCMTWLNSQPPKSVLYVSFGSLVGL- 305 (483)
Q Consensus 229 s~-~l~~~~~~~~~~~~-~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vi~vs~Gs~~~~- 305 (483)
.. .++.+ .... ..+.+++... ....+.+|+...+++++|||++||....
T Consensus 190 ~~~~~~~~-----~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~v~v~~G~~~~~~ 241 (398)
T 4fzr_A 190 CPPSMEAQ-----PKPGTTKMRYVPYNG-----------------------RNDQVPSWVFEERKQPRLCLTFGTRVPLP 241 (398)
T ss_dssp SCGGGC---------CCCEECCCCCCCC-----------------------SSCCCCHHHHSCCSSCEEECC--------
T ss_pred CChhhCCC-----CCCCCCCeeeeCCCC-----------------------CCCCCchhhhcCCCCCEEEEEccCccccc
Confidence 22 33322 1000 0112222100 1122445766556778999999999753
Q ss_pred -------CHHHHHHHHHHHHhCCCeEEEEEcCCccCCCCCCCCCChhhhhhcCCCceeEEeccCHHHHhccCCccceeec
Q 011531 306 -------TREQMSELWHGLVNRGQRFLLVVRPDLILGEPGAAETPLAQNEGTEERNRFIVSWAPQEEVLAHPAVGGFLTH 378 (483)
Q Consensus 306 -------~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~ItH 378 (483)
..+.+..+++++.+.+.+++|+..... .+.+. ..++| +.+.+|+|+.++|+++++ ||||
T Consensus 242 ~~~~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~----------~~~l~-~~~~~-v~~~~~~~~~~ll~~ad~--~v~~ 307 (398)
T 4fzr_A 242 NTNTIPGGLSLLQALSQELPKLGFEVVVAVSDKL----------AQTLQ-PLPEG-VLAAGQFPLSAIMPACDV--VVHH 307 (398)
T ss_dssp --------CCSHHHHHHHGGGGTCEEEECCCC-------------------CCTT-EEEESCCCHHHHGGGCSE--EEEC
T ss_pred ccccccchHHHHHHHHHHHHhCCCEEEEEeCCcc----------hhhhc-cCCCc-EEEeCcCCHHHHHhhCCE--EEec
Confidence 335578899999988999998874321 11111 24555 999999999999988776 9999
Q ss_pred cCchhHHHHHHhCCceeccccccchhHHHHHHHHhhccceecC-CCCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHH
Q 011531 379 GGWNSTLEGIAAGVPMICWPQFSDQLVNSRCVSEVWKIGFDMK-DTCDGSIIEKLVRDLMENKREEIMGSTDRVATMARD 457 (483)
Q Consensus 379 gG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~-~~~~~~~l~~~i~~ll~~~~~~~~~~a~~l~~~~~~ 457 (483)
||.||+.||+++|+|+|++|...||+.|+.++++ .|+|+.++ +.++++.|.++|.++|+| ++++++++++++.+.+
T Consensus 308 gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~-~g~g~~~~~~~~~~~~l~~ai~~ll~~--~~~~~~~~~~~~~~~~ 384 (398)
T 4fzr_A 308 GGHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHA-AGAGVEVPWEQAGVESVLAACARIRDD--SSYVGNARRLAAEMAT 384 (398)
T ss_dssp CCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHH-TTSEEECC-------CHHHHHHHHHHC--THHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHhCCCEEecCCchhHHHHHHHHHH-cCCEEecCcccCCHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHc
Confidence 9999999999999999999999999999999975 89999998 778999999999999999 8999999999998876
No 17
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=1.2e-33 Score=282.55 Aligned_cols=353 Identities=14% Similarity=0.115 Sum_probs=227.8
Q ss_pred CCCCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCCCchhhhhhccccccccCCCCCeEEEeCCCCCCCC-----
Q 011531 4 SHVNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTDHNHDLLLRNTDITSFCNRFPNFQFRSIPSGLPAN----- 78 (483)
Q Consensus 4 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~~~p~~l~~~----- 78 (483)
+++.|||+|++.++.||++|++.|+++|.++||+|+++++ ...+.+... ++.+..++......
T Consensus 17 ~~~~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~~-----------G~~~~~~~~~~~~~~~~~~ 84 (398)
T 3oti_A 17 EGRHMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAAA-----------GLEVVDVAPDYSAVKVFEQ 84 (398)
T ss_dssp --CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHTT-----------TCEEEESSTTCCHHHHHHH
T ss_pred hhhcCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHhC-----------CCeeEecCCccCHHHHhhh
Confidence 3455999999999999999999999999999999999999 665555443 48888887432100
Q ss_pred ---------------cccCCCCHHHHHHHHHHhchHHHHHHHHHhhhhhcCCCCccEEEEcCCCCcchHHHHHHcCCCeE
Q 011531 79 ---------------VIRSGLTAKDVFDAMKAVSKPAFRDLLISLREETEQRQSPTCVIADGILCFLTLDVSEELQIPLL 143 (483)
Q Consensus 79 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~D~VI~D~~~~~~~~~~A~~lgIP~v 143 (483)
...........+..........+.+++++ ++||+||+|...++ +..+|+.+|||++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--------~~pDlVv~d~~~~~-~~~aA~~~giP~v 155 (398)
T 3oti_A 85 VAKDNPRFAETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDD--------YRPDLVVYEQGATV-GLLAADRAGVPAV 155 (398)
T ss_dssp HHHHCHHHHHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHH--------HCCSEEEEETTCHH-HHHHHHHHTCCEE
T ss_pred cccCCccccccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHH--------cCCCEEEECchhhH-HHHHHHHcCCCEE
Confidence 00011111222222222233333444444 57999999988887 8999999999999
Q ss_pred EEecchhHHHHHHHhhhhhhhCCCCCCCCCCCCCCccccCCCCCCccCCCCCCccccCCCCChHHHHHHHHHhhhccccc
Q 011531 144 ALRTHNASYSWIYFLLPKLVEDGHIPFPDENMEKPVAGIPGFENFLRNRDLPGTCRVKTSDDDYLLQFFIGETFAMTRAS 223 (483)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (483)
.+........ . .. ..... ........ ........+
T Consensus 156 ~~~~~~~~~~---------------------------------~-~~-----~~~~~---~l~~~~~~---~~~~~~~~~ 190 (398)
T 3oti_A 156 QRNQSAWRTR---------------------------------G-MH-----RSIAS---FLTDLMDK---HQVSLPEPV 190 (398)
T ss_dssp EECCTTCCCT---------------------------------T-HH-----HHHHT---TCHHHHHH---TTCCCCCCS
T ss_pred EEeccCCCcc---------------------------------c-hh-----hHHHH---HHHHHHHH---cCCCCCCCC
Confidence 8753211000 0 00 00000 00000000 000001112
Q ss_pred EEEEecC-CCCHHHHHHHhhcc-CcceeeCCcccccccccccCCCCCCCCCCCCcccccccccccccCCCCeEEEEecCc
Q 011531 224 ALILNTF-EIEAPVVSLLGSHF-TKIYTIGPLHELRKSRMKDINSPSVSSSGILQTEDTSCMTWLNSQPPKSVLYVSFGS 301 (483)
Q Consensus 224 ~~l~~s~-~l~~~~~~~~~~~~-~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vi~vs~Gs 301 (483)
..+.... .+..+ .... ..+.++. . .....+.+|+...+++++|||++||
T Consensus 191 ~~~~~~~~~~~~~-----~~~~~~~~~~~~-~-----------------------~~~~~~~~~~~~~~~~~~v~v~~G~ 241 (398)
T 3oti_A 191 ATIESFPPSLLLE-----AEPEGWFMRWVP-Y-----------------------GGGAVLGDRLPPVPARPEVAITMGT 241 (398)
T ss_dssp EEECSSCGGGGTT-----SCCCSBCCCCCC-C-----------------------CCCEECCSSCCCCCSSCEEEECCTT
T ss_pred eEEEeCCHHHCCC-----CCCCCCCccccC-C-----------------------CCCcCCchhhhcCCCCCEEEEEcCC
Confidence 2222121 11111 0000 0011110 0 0112234577656678899999999
Q ss_pred ccCC--CHHHHHHHHHHHHhCCCeEEEEEcCCccCCCCCCCCCChhhhhhcCCCceeEEeccCHHHHhccCCccceeecc
Q 011531 302 LVGL--TREQMSELWHGLVNRGQRFLLVVRPDLILGEPGAAETPLAQNEGTEERNRFIVSWAPQEEVLAHPAVGGFLTHG 379 (483)
Q Consensus 302 ~~~~--~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~ItHg 379 (483)
.... ..+.+..++++++..+.+++|+.... . .+.+. ..++| +.+.+|+|+.++|+++++ |||||
T Consensus 242 ~~~~~~~~~~~~~~~~~l~~~~~~~v~~~g~~--------~--~~~l~-~~~~~-v~~~~~~~~~~ll~~ad~--~v~~~ 307 (398)
T 3oti_A 242 IELQAFGIGAVEPIIAAAGEVDADFVLALGDL--------D--ISPLG-TLPRN-VRAVGWTPLHTLLRTCTA--VVHHG 307 (398)
T ss_dssp THHHHHCGGGHHHHHHHHHTSSSEEEEECTTS--------C--CGGGC-SCCTT-EEEESSCCHHHHHTTCSE--EEECC
T ss_pred CccccCcHHHHHHHHHHHHcCCCEEEEEECCc--------C--hhhhc-cCCCc-EEEEccCCHHHHHhhCCE--EEECC
Confidence 9653 55668889999998899999988432 1 12221 24455 999999999999977666 99999
Q ss_pred CchhHHHHHHhCCceeccccccchhHHH--HHHHHhhccceecC-CCCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHH
Q 011531 380 GWNSTLEGIAAGVPMICWPQFSDQLVNS--RCVSEVWKIGFDMK-DTCDGSIIEKLVRDLMENKREEIMGSTDRVATMAR 456 (483)
Q Consensus 380 G~gs~~eal~~GvP~l~~P~~~DQ~~na--~~v~~~~G~G~~l~-~~~~~~~l~~~i~~ll~~~~~~~~~~a~~l~~~~~ 456 (483)
|.||+.||+++|+|+|++|...||..|| .++++ .|+|+.++ ++.+.+.|. ++|+| ++++++++++++.+.
T Consensus 308 G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~-~g~g~~~~~~~~~~~~l~----~ll~~--~~~~~~~~~~~~~~~ 380 (398)
T 3oti_A 308 GGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSR-RGIGLVSTSDKVDADLLR----RLIGD--ESLRTAAREVREEMV 380 (398)
T ss_dssp CHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHH-HTSEEECCGGGCCHHHHH----HHHHC--HHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHH-CCCEEeeCCCCCCHHHHH----HHHcC--HHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999 99965 89999998 677888777 88888 999999999999987
Q ss_pred HHHhcCCChHHHHHHHHHHHH
Q 011531 457 DAVNEGGSSYRNLDGLIEDIR 477 (483)
Q Consensus 457 ~~~~~gg~~~~~~~~l~~~l~ 477 (483)
+. . + ...+.+.++++.
T Consensus 381 ~~---~-~-~~~~~~~l~~l~ 396 (398)
T 3oti_A 381 AL---P-T-PAETVRRIVERI 396 (398)
T ss_dssp TS---C-C-HHHHHHHHHHHH
T ss_pred hC---C-C-HHHHHHHHHHHh
Confidence 63 3 2 455556666553
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=5.9e-32 Score=269.67 Aligned_cols=357 Identities=12% Similarity=0.147 Sum_probs=223.8
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCCCchhhhhhccccccccCCCCCeEEEeC-CCCCCC--------
Q 011531 7 NPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTDHNHDLLLRNTDITSFCNRFPNFQFRSI-PSGLPA-------- 77 (483)
Q Consensus 7 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~~~-p~~l~~-------- 77 (483)
+|||+|++.++.||++|++.|+++|+++||+|++++++...+.+... ++.+..+ +.....
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~-----------g~~~~~~~~~~~~~~~~~~~~~ 69 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHGA-----------GLTTAGIRGNDRTGDTGGTTQL 69 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHHHB-----------TCEEEEC--------------C
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHHhC-----------CCceeeecCCccchhhhhhhcc
Confidence 58999999999999999999999999999999999986554444433 3666666 321100
Q ss_pred ----CcccCCC--CHHHHHHHHHHhc----hHHHHHHHHHhhhhhcCCCCccEEEEcCCCCcchHHHHHHcCCCeEEEec
Q 011531 78 ----NVIRSGL--TAKDVFDAMKAVS----KPAFRDLLISLREETEQRQSPTCVIADGILCFLTLDVSEELQIPLLALRT 147 (483)
Q Consensus 78 ----~~~~~~~--~~~~~~~~~~~~~----~~~~~~ll~~~~~~~~~~~~~D~VI~D~~~~~~~~~~A~~lgIP~v~~~~ 147 (483)
....... .....+......+ ...+.++.+.+++ ++||+|++|...++ +..+|+.+|||++.+..
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-----~~PD~Vv~~~~~~~-~~~aa~~~giP~v~~~~ 143 (391)
T 3tsa_A 70 RFPNPAFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEA-----WRPSVLLVDVCALI-GRVLGGLLDLPVVLHRW 143 (391)
T ss_dssp CSCCGGGGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HCCSEEEEETTCHH-HHHHHHHTTCCEEEECC
T ss_pred cccccccccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHh-----cCCCEEEeCcchhH-HHHHHHHhCCCEEEEec
Confidence 0000000 1111111111111 0013333444433 68999999987777 88999999999999754
Q ss_pred chhHHHHHHHhhhhhhhCCCCCCCCCCCCCCccccCCCCCCccCCCCCCccccCCCCChHHHHHHHHHhhh--cccccEE
Q 011531 148 HNASYSWIYFLLPKLVEDGHIPFPDENMEKPVAGIPGFENFLRNRDLPGTCRVKTSDDDYLLQFFIGETFA--MTRASAL 225 (483)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 225 (483)
........ .... ...+.......... ....+..
T Consensus 144 ~~~~~~~~-----------------------------------------~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 178 (391)
T 3tsa_A 144 GVDPTAGP-----------------------------------------FSDR----AHELLDPVCRHHGLTGLPTPELI 178 (391)
T ss_dssp SCCCTTTH-----------------------------------------HHHH----HHHHHHHHHHHTTSSSSCCCSEE
T ss_pred CCcccccc-----------------------------------------ccch----HHHHHHHHHHHcCCCCCCCCceE
Confidence 32110000 0000 00001111111000 0111222
Q ss_pred EEecC-CCCHHHHHHHhh-ccCcceeeCCcccccccccccCCCCCCCCCCCCcccccccccccccCCCCeEEEEecCccc
Q 011531 226 ILNTF-EIEAPVVSLLGS-HFTKIYTIGPLHELRKSRMKDINSPSVSSSGILQTEDTSCMTWLNSQPPKSVLYVSFGSLV 303 (483)
Q Consensus 226 l~~s~-~l~~~~~~~~~~-~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vi~vs~Gs~~ 303 (483)
+.... +++.. .. ....+.++ |.. ....+..|+...+++++|++++||..
T Consensus 179 ~~~~~~~~~~~-----~~~~~~~~~~~-p~~-----------------------~~~~~~~~~~~~~~~~~vlv~~G~~~ 229 (391)
T 3tsa_A 179 LDPCPPSLQAS-----DAPQGAPVQYV-PYN-----------------------GSGAFPAWGAARTSARRVCICMGRMV 229 (391)
T ss_dssp EECSCGGGSCT-----TSCCCEECCCC-CCC-----------------------CCEECCGGGSSCCSSEEEEEECCHHH
T ss_pred EEecChhhcCC-----CCCccCCeeee-cCC-----------------------CCcCCCchhhcCCCCCEEEEEcCCCC
Confidence 32222 22221 10 00112222 110 11123357765567889999999985
Q ss_pred C---CCHHHHHHHHHHHHhC-CCeEEEEEcCCccCCCCCCCCCChhhhhhcCCCceeEEeccCHHHHhccCCccceeecc
Q 011531 304 G---LTREQMSELWHGLVNR-GQRFLLVVRPDLILGEPGAAETPLAQNEGTEERNRFIVSWAPQEEVLAHPAVGGFLTHG 379 (483)
Q Consensus 304 ~---~~~~~~~~~~~a~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~ItHg 379 (483)
. ...+.+..++++ ++. +.+++|+...... +.+. ..++| +.+.+|+|+.++|+++++ |||||
T Consensus 230 ~~~~~~~~~~~~~~~~-~~~p~~~~v~~~~~~~~----------~~l~-~~~~~-v~~~~~~~~~~ll~~ad~--~v~~~ 294 (391)
T 3tsa_A 230 LNATGPAPLLRAVAAA-TELPGVEAVIAVPPEHR----------ALLT-DLPDN-ARIAESVPLNLFLRTCEL--VICAG 294 (391)
T ss_dssp HHHHCSHHHHHHHHHH-HTSTTEEEEEECCGGGG----------GGCT-TCCTT-EEECCSCCGGGTGGGCSE--EEECC
T ss_pred CcccchHHHHHHHHHh-ccCCCeEEEEEECCcch----------hhcc-cCCCC-EEEeccCCHHHHHhhCCE--EEeCC
Confidence 3 336778888888 877 7788888743211 1111 13455 999999999999966665 99999
Q ss_pred CchhHHHHHHhCCceeccccccchhHHHHHHHHhhccceecCC---CCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHH
Q 011531 380 GWNSTLEGIAAGVPMICWPQFSDQLVNSRCVSEVWKIGFDMKD---TCDGSIIEKLVRDLMENKREEIMGSTDRVATMAR 456 (483)
Q Consensus 380 G~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~---~~~~~~l~~~i~~ll~~~~~~~~~~a~~l~~~~~ 456 (483)
|.||+.||+++|+|+|++|...||+.|+.++++ .|+|..++. ..+.+.|.++|.++|+| ++++++++++++.+.
T Consensus 295 G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~-~g~g~~~~~~~~~~~~~~l~~ai~~ll~~--~~~~~~~~~~~~~~~ 371 (391)
T 3tsa_A 295 GSGTAFTATRLGIPQLVLPQYFDQFDYARNLAA-AGAGICLPDEQAQSDHEQFTDSIATVLGD--TGFAAAAIKLSDEIT 371 (391)
T ss_dssp CHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHH-TTSEEECCSHHHHTCHHHHHHHHHHHHTC--THHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhCCCEEecCCcccHHHHHHHHHH-cCCEEecCcccccCCHHHHHHHHHHHHcC--HHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999965 899999863 38999999999999999 899999999999887
Q ss_pred HHHhcCCChHHHHHHHHHHHH
Q 011531 457 DAVNEGGSSYRNLDGLIEDIR 477 (483)
Q Consensus 457 ~~~~~gg~~~~~~~~l~~~l~ 477 (483)
+ ..+ ...+.+.++++.
T Consensus 372 ~----~~~-~~~~~~~i~~~~ 387 (391)
T 3tsa_A 372 A----MPH-PAALVRTLENTA 387 (391)
T ss_dssp T----SCC-HHHHHHHHHHC-
T ss_pred c----CCC-HHHHHHHHHHHH
Confidence 6 333 344555555543
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.98 E-value=2.8e-30 Score=259.30 Aligned_cols=361 Identities=17% Similarity=0.197 Sum_probs=232.2
Q ss_pred CCCCCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCCCchhhhhhccccccccCCCCCeEEEeCCCCC-------
Q 011531 3 RSHVNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTDHNHDLLLRNTDITSFCNRFPNFQFRSIPSGL------- 75 (483)
Q Consensus 3 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~~~p~~l------- 75 (483)
++..+|||+|++.++.||++|++.|+++|+++||+|++++++...+.+... ++.+..++..+
T Consensus 16 ~~~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~-----------g~~~~~~~~~~~~~~~~~ 84 (412)
T 3otg_A 16 IEGRHMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRKL-----------GFEPVATGMPVFDGFLAA 84 (412)
T ss_dssp --CCSCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHT-----------TCEEEECCCCHHHHHHHH
T ss_pred cccceeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHhc-----------CCceeecCcccccchhhh
Confidence 455679999999999999999999999999999999999996543333332 48888887410
Q ss_pred -----CCC------cccCCCCHHHHHHHHHHhchHHHHHHHHHhhhhhcCCCCccEEEEcCCCCcchHHHHHHcCCCeEE
Q 011531 76 -----PAN------VIRSGLTAKDVFDAMKAVSKPAFRDLLISLREETEQRQSPTCVIADGILCFLTLDVSEELQIPLLA 144 (483)
Q Consensus 76 -----~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~D~VI~D~~~~~~~~~~A~~lgIP~v~ 144 (483)
... ...........+.... ....+..+.+.+++ .+||+||+|....+ +..+|+.+|||++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~l~~-----~~pDvVv~~~~~~~-~~~aa~~~giP~v~ 156 (412)
T 3otg_A 85 LRIRFDTDSPEGLTPEQLSELPQIVFGRVI--PQRVFDELQPVIER-----LRPDLVVQEISNYG-AGLAALKAGIPTIC 156 (412)
T ss_dssp HHHHHSCSCCTTCCHHHHTTSHHHHHHTHH--HHHHHHHHHHHHHH-----HCCSEEEEETTCHH-HHHHHHHHTCCEEE
T ss_pred hhhhhcccCCccCChhHhhHHHHHHHhccc--hHHHHHHHHHHHHh-----cCCCEEEECchhhH-HHHHHHHcCCCEEE
Confidence 000 0001111121211110 11112333333332 57999999987777 88999999999998
Q ss_pred EecchhHHHHHHHhhhhhhhCCCCCCCCCCCCCCccccCCCCCCccCCCCCCccccCCCCChHHHHHHHHHhh-------
Q 011531 145 LRTHNASYSWIYFLLPKLVEDGHIPFPDENMEKPVAGIPGFENFLRNRDLPGTCRVKTSDDDYLLQFFIGETF------- 217 (483)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 217 (483)
+.............+ ............
T Consensus 157 ~~~~~~~~~~~~~~~----------------------------------------------~~~~~~~~~~~g~~~~~~~ 190 (412)
T 3otg_A 157 HGVGRDTPDDLTRSI----------------------------------------------EEEVRGLAQRLGLDLPPGR 190 (412)
T ss_dssp ECCSCCCCSHHHHHH----------------------------------------------HHHHHHHHHHTTCCCCSSC
T ss_pred ecccccCchhhhHHH----------------------------------------------HHHHHHHHHHcCCCCCccc
Confidence 754321100000000 000000000000
Q ss_pred hcccccEEEEecC-CCCHHHHHHHhhccC---cceeeCCcccccccccccCCCCCCCCCCCCcccccccccc-cccCCCC
Q 011531 218 AMTRASALILNTF-EIEAPVVSLLGSHFT---KIYTIGPLHELRKSRMKDINSPSVSSSGILQTEDTSCMTW-LNSQPPK 292 (483)
Q Consensus 218 ~~~~~~~~l~~s~-~l~~~~~~~~~~~~~---~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-l~~~~~~ 292 (483)
.....+.++..+. .++.+. ..... .+.+++.- ......+| ....+++
T Consensus 191 ~~~~~d~~i~~~~~~~~~~~----~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~ 242 (412)
T 3otg_A 191 IDGFGNPFIDIFPPSLQEPE----FRARPRRHELRPVPFA------------------------EQGDLPAWLSSRDTAR 242 (412)
T ss_dssp CGGGGCCEEECSCGGGSCHH----HHTCTTEEECCCCCCC------------------------CCCCCCGGGGGSCTTS
T ss_pred ccCCCCeEEeeCCHHhcCCc----ccCCCCcceeeccCCC------------------------CCCCCCCccccccCCC
Confidence 0012233444333 333321 11101 11111110 11123345 2224567
Q ss_pred eEEEEecCcccCCCHHHHHHHHHHHHhCCCeEEEEEcCCccCCCCCCCCCChhhhhhcCCCceeEEeccCHHHHhccCCc
Q 011531 293 SVLYVSFGSLVGLTREQMSELWHGLVNRGQRFLLVVRPDLILGEPGAAETPLAQNEGTEERNRFIVSWAPQEEVLAHPAV 372 (483)
Q Consensus 293 ~vi~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~ 372 (483)
++|++++||......+.+..+++++++.+.+++|+..... ..+.+. ..+++ +.+.+|+|+.++|+++++
T Consensus 243 ~~vlv~~G~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~---------~~~~l~-~~~~~-v~~~~~~~~~~~l~~ad~ 311 (412)
T 3otg_A 243 PLVYLTLGTSSGGTVEVLRAAIDGLAGLDADVLVASGPSL---------DVSGLG-EVPAN-VRLESWVPQAALLPHVDL 311 (412)
T ss_dssp CEEEEECTTTTCSCHHHHHHHHHHHHTSSSEEEEECCSSC---------CCTTCC-CCCTT-EEEESCCCHHHHGGGCSE
T ss_pred CEEEEEcCCCCcCcHHHHHHHHHHHHcCCCEEEEEECCCC---------Chhhhc-cCCCc-EEEeCCCCHHHHHhcCcE
Confidence 8999999999866778889999999988889999884321 111111 13455 999999999999988777
Q ss_pred cceeeccCchhHHHHHHhCCceeccccccchhHHHHHHHHhhccceecC-CCCCHHHHHHHHHHHHhHhHHHHHHHHHHH
Q 011531 373 GGFLTHGGWNSTLEGIAAGVPMICWPQFSDQLVNSRCVSEVWKIGFDMK-DTCDGSIIEKLVRDLMENKREEIMGSTDRV 451 (483)
Q Consensus 373 ~~~ItHgG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~-~~~~~~~l~~~i~~ll~~~~~~~~~~a~~l 451 (483)
||+|||.+|+.||+++|+|+|++|...||..|+..+++ .|+|..++ +.++++.|.++|.++|+| +++++++.+.
T Consensus 312 --~v~~~g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~-~g~g~~~~~~~~~~~~l~~ai~~ll~~--~~~~~~~~~~ 386 (412)
T 3otg_A 312 --VVHHGGSGTTLGALGAGVPQLSFPWAGDSFANAQAVAQ-AGAGDHLLPDNISPDSVSGAAKRLLAE--ESYRAGARAV 386 (412)
T ss_dssp --EEESCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHH-HTSEEECCGGGCCHHHHHHHHHHHHHC--HHHHHHHHHH
T ss_pred --EEECCchHHHHHHHHhCCCEEecCCchhHHHHHHHHHH-cCCEEecCcccCCHHHHHHHHHHHHhC--HHHHHHHHHH
Confidence 99999999999999999999999999999999999975 79999998 678999999999999999 8999999998
Q ss_pred HHHHHHHHhcCCChHHHHHHHHHHHH
Q 011531 452 ATMARDAVNEGGSSYRNLDGLIEDIR 477 (483)
Q Consensus 452 ~~~~~~~~~~gg~~~~~~~~l~~~l~ 477 (483)
++.+.+. .+ ...+.+.++++.
T Consensus 387 ~~~~~~~----~~-~~~~~~~~~~l~ 407 (412)
T 3otg_A 387 AAEIAAM----PG-PDEVVRLLPGFA 407 (412)
T ss_dssp HHHHHHS----CC-HHHHHTTHHHHH
T ss_pred HHHHhcC----CC-HHHHHHHHHHHh
Confidence 8888763 33 444444444443
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.96 E-value=1.5e-27 Score=234.97 Aligned_cols=317 Identities=15% Similarity=0.121 Sum_probs=194.3
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCCCch-hhhhhccccccccCCCCCeEEEeCCC-CCCCCc-ccCCC
Q 011531 8 PHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTDHNH-DLLLRNTDITSFCNRFPNFQFRSIPS-GLPANV-IRSGL 84 (483)
Q Consensus 8 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~f~~~p~-~l~~~~-~~~~~ 84 (483)
.||+|...||.||++|.++||++|+++||+|+|++++.-. .++.... ++.+..+|. +++... .....
T Consensus 3 ~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~~----------g~~~~~i~~~~~~~~~~~~~~~ 72 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPKA----------GLPLHLIQVSGLRGKGLKSLVK 72 (365)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGGG----------TCCEEECC--------------
T ss_pred CcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhhc----------CCcEEEEECCCcCCCCHHHHHH
Confidence 5899999999999999999999999999999999975432 3343332 477777762 222211 11111
Q ss_pred CHHHHHHHHHHhchHHHHHHHHHhhhhhcCCCCccEEEEcCCCCc-chHHHHHHcCCCeEEEecchhHHHHHHHhhhhhh
Q 011531 85 TAKDVFDAMKAVSKPAFRDLLISLREETEQRQSPTCVIADGILCF-LTLDVSEELQIPLLALRTHNASYSWIYFLLPKLV 163 (483)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~D~VI~D~~~~~-~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~ 163 (483)
....++..+. ....++++ .+||+||++..... .+..+|..+|||++..-.
T Consensus 73 ~~~~~~~~~~-----~~~~~l~~--------~~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~---------------- 123 (365)
T 3s2u_A 73 APLELLKSLF-----QALRVIRQ--------LRPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQ---------------- 123 (365)
T ss_dssp CHHHHHHHHH-----HHHHHHHH--------HCCSEEEECSSSTHHHHHHHHHHTTCCEEEEEC----------------
T ss_pred HHHHHHHHHH-----HHHHHHHh--------cCCCEEEEcCCcchHHHHHHHHHcCCCEEEEec----------------
Confidence 1111111111 12344444 57999999976542 145678999999997511
Q ss_pred hCCCCCCCCCCCCCCccccCCCCCCccCCCCCCccccCCCCChHHHHHHHHHhhhcccccEEEEecC--CCCHHHHHHHh
Q 011531 164 EDGHIPFPDENMEKPVAGIPGFENFLRNRDLPGTCRVKTSDDDYLLQFFIGETFAMTRASALILNTF--EIEAPVVSLLG 241 (483)
Q Consensus 164 ~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~--~l~~~~~~~~~ 241 (483)
+.++++.| .+. .+.++.++ .++ .+.
T Consensus 124 ----------------n~~~G~~n-----------------------r~l-----~~~a~~v~-~~~~~~~~-------- 150 (365)
T 3s2u_A 124 ----------------NAVAGTAN-----------------------RSL-----APIARRVC-EAFPDTFP-------- 150 (365)
T ss_dssp ----------------SSSCCHHH-----------------------HHH-----GGGCSEEE-ESSTTSSC--------
T ss_pred ----------------chhhhhHH-----------------------Hhh-----ccccceee-eccccccc--------
Confidence 11122221 000 01122222 223 111
Q ss_pred hccCcceeeCCcccccccccccCCCCCCCCCCCCcccccccccccccCCCCeEEEEecCcccCCCHHHHHHHHHHHHhC-
Q 011531 242 SHFTKIYTIGPLHELRKSRMKDINSPSVSSSGILQTEDTSCMTWLNSQPPKSVLYVSFGSLVGLTREQMSELWHGLVNR- 320 (483)
Q Consensus 242 ~~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vi~vs~Gs~~~~~~~~~~~~~~a~~~~- 320 (483)
...+.+++|......... .. ..+....+++++|+|..||...... .+.+.++++.+
T Consensus 151 -~~~k~~~~g~pvr~~~~~-----------------~~---~~~~~~~~~~~~ilv~gGs~g~~~~--~~~~~~al~~l~ 207 (365)
T 3s2u_A 151 -ASDKRLTTGNPVRGELFL-----------------DA---HARAPLTGRRVNLLVLGGSLGAEPL--NKLLPEALAQVP 207 (365)
T ss_dssp -C---CEECCCCCCGGGCC-----------------CT---TSSCCCTTSCCEEEECCTTTTCSHH--HHHHHHHHHTSC
T ss_pred -CcCcEEEECCCCchhhcc-----------------ch---hhhcccCCCCcEEEEECCcCCcccc--chhhHHHHHhcc
Confidence 113566677544321100 00 0011113456789999999875332 23345555443
Q ss_pred ---CCeEEEEEcCCccCCCCCCCCCChhhhh---hcCCCceeEEeccCH-HHHhccCCccceeeccCchhHHHHHHhCCc
Q 011531 321 ---GQRFLLVVRPDLILGEPGAAETPLAQNE---GTEERNRFIVSWAPQ-EEVLAHPAVGGFLTHGGWNSTLEGIAAGVP 393 (483)
Q Consensus 321 ---~~~~i~~~~~~~~~~~~~~~~~~~~~~~---~~~~~nv~~~~~~p~-~~ll~~~~~~~~ItHgG~gs~~eal~~GvP 393 (483)
+..++|+.+.. ..+...+ ..+.+ +.+.+|+++ .++|+.+++ +|||+|.+|+.|++++|+|
T Consensus 208 ~~~~~~vi~~~G~~----------~~~~~~~~~~~~~~~-~~v~~f~~dm~~~l~~aDl--vI~raG~~Tv~E~~a~G~P 274 (365)
T 3s2u_A 208 LEIRPAIRHQAGRQ----------HAEITAERYRTVAVE-ADVAPFISDMAAAYAWADL--VICRAGALTVSELTAAGLP 274 (365)
T ss_dssp TTTCCEEEEECCTT----------THHHHHHHHHHTTCC-CEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCC
T ss_pred cccceEEEEecCcc----------ccccccceecccccc-cccccchhhhhhhhccceE--EEecCCcchHHHHHHhCCC
Confidence 44677766321 1122221 23345 899999996 579988887 9999999999999999999
Q ss_pred eeccccc----cchhHHHHHHHHhhccceecC-CCCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHH
Q 011531 394 MICWPQF----SDQLVNSRCVSEVWKIGFDMK-DTCDGSIIEKLVRDLMENKREEIMGSTDRVATMARDA 458 (483)
Q Consensus 394 ~l~~P~~----~DQ~~na~~v~~~~G~G~~l~-~~~~~~~l~~~i~~ll~~~~~~~~~~a~~l~~~~~~~ 458 (483)
+|.+|+- .+|..||+.+++ .|+|..++ +.++++.|.++|.++|+| ++ +.++|++..++.
T Consensus 275 ~Ilip~p~~~~~~Q~~NA~~l~~-~G~a~~l~~~~~~~~~L~~~i~~ll~d--~~---~~~~m~~~a~~~ 338 (365)
T 3s2u_A 275 AFLVPLPHAIDDHQTRNAEFLVR-SGAGRLLPQKSTGAAELAAQLSEVLMH--PE---TLRSMADQARSL 338 (365)
T ss_dssp EEECC-----CCHHHHHHHHHHT-TTSEEECCTTTCCHHHHHHHHHHHHHC--TH---HHHHHHHHHHHT
T ss_pred eEEeccCCCCCcHHHHHHHHHHH-CCCEEEeecCCCCHHHHHHHHHHHHCC--HH---HHHHHHHHHHhc
Confidence 9999974 589999999975 89999998 789999999999999997 43 445666666664
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.95 E-value=7.5e-27 Score=204.62 Aligned_cols=162 Identities=22% Similarity=0.371 Sum_probs=136.6
Q ss_pred cccccccccccCCCCeEEEEecCccc-CCCHHHHHHHHHHHHhCCCeEEEEEcCCccCCCCCCCCCChhhhhhcCCCcee
Q 011531 278 EDTSCMTWLNSQPPKSVLYVSFGSLV-GLTREQMSELWHGLVNRGQRFLLVVRPDLILGEPGAAETPLAQNEGTEERNRF 356 (483)
Q Consensus 278 ~~~~l~~~l~~~~~~~vi~vs~Gs~~-~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~ 356 (483)
+++++.+|++..+++++|||++||.. ....+.+..++++++..+.+++|+.+.. . ++ ..++| +.
T Consensus 7 l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~--------~--~~----~~~~~-v~ 71 (170)
T 2o6l_A 7 LPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGN--------K--PD----TLGLN-TR 71 (170)
T ss_dssp CCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSS--------C--CT----TCCTT-EE
T ss_pred CCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCc--------C--cc----cCCCc-EE
Confidence 45678899986667789999999987 4567778889999998889999998432 1 11 13344 99
Q ss_pred EEeccCHHHHhccCCccceeeccCchhHHHHHHhCCceeccccccchhHHHHHHHHhhccceecC-CCCCHHHHHHHHHH
Q 011531 357 IVSWAPQEEVLAHPAVGGFLTHGGWNSTLEGIAAGVPMICWPQFSDQLVNSRCVSEVWKIGFDMK-DTCDGSIIEKLVRD 435 (483)
Q Consensus 357 ~~~~~p~~~ll~~~~~~~~ItHgG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~-~~~~~~~l~~~i~~ 435 (483)
+.+|+||.+++.|+.+++||||||.||++||+++|+|+|++|...||..||+++++ .|+|+.++ +.++.+.|.++|.+
T Consensus 72 ~~~~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~-~g~g~~~~~~~~~~~~l~~~i~~ 150 (170)
T 2o6l_A 72 LYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKA-RGAAVRVDFNTMSSTDLLNALKR 150 (170)
T ss_dssp EESSCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHT-TTSEEECCTTTCCHHHHHHHHHH
T ss_pred EecCCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHH-cCCeEEeccccCCHHHHHHHHHH
Confidence 99999999999888888899999999999999999999999999999999999965 89999998 67899999999999
Q ss_pred HHhHhHHHHHHHHHHHHHHHHH
Q 011531 436 LMENKREEIMGSTDRVATMARD 457 (483)
Q Consensus 436 ll~~~~~~~~~~a~~l~~~~~~ 457 (483)
++++ ++|+++++++++.+++
T Consensus 151 ll~~--~~~~~~a~~~~~~~~~ 170 (170)
T 2o6l_A 151 VIND--PSYKENVMKLSRIQHD 170 (170)
T ss_dssp HHHC--HHHHHHHHHHC-----
T ss_pred HHcC--HHHHHHHHHHHHHhhC
Confidence 9998 8899999999998864
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.81 E-value=3.1e-18 Score=168.39 Aligned_cols=302 Identities=14% Similarity=0.086 Sum_probs=180.5
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCCCchh-hhhhccccccccCCCCCeEEEeCCCC-CCCCcccCCC
Q 011531 7 NPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTDHNHD-LLLRNTDITSFCNRFPNFQFRSIPSG-LPANVIRSGL 84 (483)
Q Consensus 7 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~f~~~p~~-l~~~~~~~~~ 84 (483)
+|||++++.+..||..+.+.|+++|.++||+|++++...... ...... ++.+..++.. +.. .
T Consensus 6 ~mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~----------g~~~~~~~~~~~~~------~ 69 (364)
T 1f0k_A 6 GKRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKH----------GIEIDFIRISGLRG------K 69 (364)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGGG----------TCEEEECCCCCCTT------C
T ss_pred CcEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhcccc----------CCceEEecCCccCc------C
Confidence 389999998888999999999999999999999999854321 221211 4677666531 111 1
Q ss_pred CHHHHHHHHHHhchHHHHHHHHHhhhhhcCCCCccEEEEcCCC--CcchHHHHHHcCCCeEEEecchhHHHHHHHhhhhh
Q 011531 85 TAKDVFDAMKAVSKPAFRDLLISLREETEQRQSPTCVIADGIL--CFLTLDVSEELQIPLLALRTHNASYSWIYFLLPKL 162 (483)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~D~VI~D~~~--~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~ 162 (483)
.....+..... ....+..+.+.+++ .+||+|+++... .. +..++..+|+|++.......
T Consensus 70 ~~~~~~~~~~~-~~~~~~~l~~~l~~-----~~pDvv~~~~~~~~~~-~~~~~~~~~~p~v~~~~~~~------------ 130 (364)
T 1f0k_A 70 GIKALIAAPLR-IFNAWRQARAIMKA-----YKPDVVLGMGGYVSGP-GGLAAWSLGIPVVLHEQNGI------------ 130 (364)
T ss_dssp CHHHHHTCHHH-HHHHHHHHHHHHHH-----HCCSEEEECSSTTHHH-HHHHHHHTTCCEEEEECSSS------------
T ss_pred ccHHHHHHHHH-HHHHHHHHHHHHHh-----cCCCEEEEeCCcCchH-HHHHHHHcCCCEEEEecCCC------------
Confidence 11111110000 00112223333332 579999998653 23 56678889999986422100
Q ss_pred hhCCCCCCCCCCCCCCccccCCCCCCccCCCCCCccccCCCCChHHHHHHHHHhhhcccccEEEEecCCCCHHHHHHHhh
Q 011531 163 VEDGHIPFPDENMEKPVAGIPGFENFLRNRDLPGTCRVKTSDDDYLLQFFIGETFAMTRASALILNTFEIEAPVVSLLGS 242 (483)
Q Consensus 163 ~~~~~~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~l~~~~~~~~~~ 242 (483)
++. ... ......+.+++.+...
T Consensus 131 --------------------~~~-----------------------~~~-----~~~~~~d~v~~~~~~~---------- 152 (364)
T 1f0k_A 131 --------------------AGL-----------------------TNK-----WLAKIATKVMQAFPGA---------- 152 (364)
T ss_dssp --------------------CCH-----------------------HHH-----HHTTTCSEEEESSTTS----------
T ss_pred --------------------CcH-----------------------HHH-----HHHHhCCEEEecChhh----------
Confidence 000 000 0012334444433311
Q ss_pred ccCcceeeCCcccccccccccCCCCCCCCCCCCcccccccccccccCCCCeEEEEecCcccCCCHHHHHHHHHHHHhC--
Q 011531 243 HFTKIYTIGPLHELRKSRMKDINSPSVSSSGILQTEDTSCMTWLNSQPPKSVLYVSFGSLVGLTREQMSELWHGLVNR-- 320 (483)
Q Consensus 243 ~~~~~~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vi~vs~Gs~~~~~~~~~~~~~~a~~~~-- 320 (483)
.+++.++|.-.....- ..+. ..+.+....++++|++..|+... ......++++++.+
T Consensus 153 -~~~~~~i~n~v~~~~~-----------------~~~~-~~~~~~~~~~~~~il~~~g~~~~--~k~~~~li~a~~~l~~ 211 (364)
T 1f0k_A 153 -FPNAEVVGNPVRTDVL-----------------ALPL-PQQRLAGREGPVRVLVVGGSQGA--RILNQTMPQVAAKLGD 211 (364)
T ss_dssp -SSSCEECCCCCCHHHH-----------------TSCC-HHHHHTTCCSSEEEEEECTTTCC--HHHHHHHHHHHHHHGG
T ss_pred -cCCceEeCCccchhhc-----------------ccch-hhhhcccCCCCcEEEEEcCchHh--HHHHHHHHHHHHHhcC
Confidence 2345555542211110 0000 00111112345678888888753 33344455666544
Q ss_pred CCeEEEEEcCCccCCCCCCCCCChhhhhh---cC-CCceeEEeccC-HHHHhccCCccceeeccCchhHHHHHHhCCcee
Q 011531 321 GQRFLLVVRPDLILGEPGAAETPLAQNEG---TE-ERNRFIVSWAP-QEEVLAHPAVGGFLTHGGWNSTLEGIAAGVPMI 395 (483)
Q Consensus 321 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~nv~~~~~~p-~~~ll~~~~~~~~ItHgG~gs~~eal~~GvP~l 395 (483)
+.+++++++ ... .+.+.+. .. ++ |.+.+|++ ...+++.+++ +|+++|.+++.||+++|+|+|
T Consensus 212 ~~~~l~i~G--------~~~--~~~l~~~~~~~~~~~-v~~~g~~~~~~~~~~~ad~--~v~~sg~~~~~EAma~G~Pvi 278 (364)
T 1f0k_A 212 SVTIWHQSG--------KGS--QQSVEQAYAEAGQPQ-HKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPAL 278 (364)
T ss_dssp GEEEEEECC--------TTC--HHHHHHHHHHTTCTT-SEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEE
T ss_pred CcEEEEEcC--------Cch--HHHHHHHHhhcCCCc-eEEecchhhHHHHHHhCCE--EEECCchHHHHHHHHhCCCEE
Confidence 456566663 211 1233221 12 35 99999995 5789988887 999999899999999999999
Q ss_pred ccccc---cchhHHHHHHHHhhccceecC-CCCCHHHHHHHHHHH
Q 011531 396 CWPQF---SDQLVNSRCVSEVWKIGFDMK-DTCDGSIIEKLVRDL 436 (483)
Q Consensus 396 ~~P~~---~DQ~~na~~v~~~~G~G~~l~-~~~~~~~l~~~i~~l 436 (483)
+.|.. .||..|++.+.+ .|.|..++ .+++.+.|+++|.++
T Consensus 279 ~~~~~g~~~~q~~~~~~~~~-~g~g~~~~~~d~~~~~la~~i~~l 322 (364)
T 1f0k_A 279 FVPFQHKDRQQYWNALPLEK-AGAAKIIEQPQLSVDAVANTLAGW 322 (364)
T ss_dssp ECCCCCTTCHHHHHHHHHHH-TTSEEECCGGGCCHHHHHHHHHTC
T ss_pred EeeCCCCchhHHHHHHHHHh-CCcEEEeccccCCHHHHHHHHHhc
Confidence 99987 799999999975 79999987 667799999999999
No 23
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.61 E-value=1.8e-15 Score=135.83 Aligned_cols=133 Identities=12% Similarity=0.132 Sum_probs=94.7
Q ss_pred CCCeEEEEecCcccCCCHHHHHHH-----HHHHHhCC-CeEEEEEcCCccCCCCCCCCCChhhhhhc---------C---
Q 011531 290 PPKSVLYVSFGSLVGLTREQMSEL-----WHGLVNRG-QRFLLVVRPDLILGEPGAAETPLAQNEGT---------E--- 351 (483)
Q Consensus 290 ~~~~vi~vs~Gs~~~~~~~~~~~~-----~~a~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~---------~--- 351 (483)
.++++|||+.||... -.+.+..+ ++++...+ .+++++++..... ....+.+.. |
T Consensus 26 ~~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~-------~~~~~~~~~~~~~~~~l~p~~~ 97 (224)
T 2jzc_A 26 IEEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSS-------EFEHLVQERGGQRESQKIPIDQ 97 (224)
T ss_dssp CCSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCC-------CCCSHHHHHTCEECSCCCSSCT
T ss_pred CCCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchh-------hHHHHHHhhhcccccccccccc
Confidence 457889999999842 34444433 48887777 7899988543210 111110000 1
Q ss_pred --------------CC-ceeEEeccCH-HHHhc-cCCccceeeccCchhHHHHHHhCCceeccccc----cchhHHHHHH
Q 011531 352 --------------ER-NRFIVSWAPQ-EEVLA-HPAVGGFLTHGGWNSTLEGIAAGVPMICWPQF----SDQLVNSRCV 410 (483)
Q Consensus 352 --------------~~-nv~~~~~~p~-~~ll~-~~~~~~~ItHgG~gs~~eal~~GvP~l~~P~~----~DQ~~na~~v 410 (483)
.+ ++.+.+|+++ .++|+ .+++ +|||||+||++|++++|+|+|++|.. .||..||+++
T Consensus 98 ~~~~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l 175 (224)
T 2jzc_A 98 FGCGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKF 175 (224)
T ss_dssp TCTTCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHH
T ss_pred ccccccccccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHH
Confidence 11 2566688886 47997 7777 99999999999999999999999984 3799999999
Q ss_pred HHhhccceecCCCCCHHHHHHHHHHHH
Q 011531 411 SEVWKIGFDMKDTCDGSIIEKLVRDLM 437 (483)
Q Consensus 411 ~~~~G~G~~l~~~~~~~~l~~~i~~ll 437 (483)
++ .|+++.+ +.+.|.++|.++.
T Consensus 176 ~~-~G~~~~~----~~~~L~~~i~~l~ 197 (224)
T 2jzc_A 176 VE-LGYVWSC----APTETGLIAGLRA 197 (224)
T ss_dssp HH-HSCCCEE----CSCTTTHHHHHHH
T ss_pred HH-CCCEEEc----CHHHHHHHHHHHH
Confidence 76 7998766 5677777887763
No 24
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.53 E-value=3.5e-13 Score=126.11 Aligned_cols=116 Identities=6% Similarity=0.006 Sum_probs=85.5
Q ss_pred CCeEEEEecCcccCCCHHHHHHHHHHHHhCCCeEEEEEcCCccCCCCCCCCCChhhhhhcC-CCceeEEeccCH-HHHhc
Q 011531 291 PKSVLYVSFGSLVGLTREQMSELWHGLVNRGQRFLLVVRPDLILGEPGAAETPLAQNEGTE-ERNRFIVSWAPQ-EEVLA 368 (483)
Q Consensus 291 ~~~vi~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~nv~~~~~~p~-~~ll~ 368 (483)
+.+.|+|++|.... .+....+++++.... ++.++... .....+.+..... ..|+.+..|+++ .++|+
T Consensus 156 ~~~~ILv~~GG~d~--~~l~~~vl~~L~~~~-~i~vv~G~--------~~~~~~~l~~~~~~~~~v~v~~~~~~m~~~m~ 224 (282)
T 3hbm_A 156 KKYDFFICMGGTDI--KNLSLQIASELPKTK-IISIATSS--------SNPNLKKLQKFAKLHNNIRLFIDHENIAKLMN 224 (282)
T ss_dssp CCEEEEEECCSCCT--TCHHHHHHHHSCTTS-CEEEEECT--------TCTTHHHHHHHHHTCSSEEEEESCSCHHHHHH
T ss_pred cCCeEEEEECCCch--hhHHHHHHHHhhcCC-CEEEEECC--------CchHHHHHHHHHhhCCCEEEEeCHHHHHHHHH
Confidence 35679999997543 235566788887654 56666632 2222233332211 124999999986 46997
Q ss_pred cCCccceeeccCchhHHHHHHhCCceeccccccchhHHHHHHHHhhccceecC
Q 011531 369 HPAVGGFLTHGGWNSTLEGIAAGVPMICWPQFSDQLVNSRCVSEVWKIGFDMK 421 (483)
Q Consensus 369 ~~~~~~~ItHgG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~ 421 (483)
.+++ +||+|| +|++|+++.|+|+|++|...+|..||+.+++ .|++..+.
T Consensus 225 ~aDl--vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~-~G~~~~~~ 273 (282)
T 3hbm_A 225 ESNK--LIISAS-SLVNEALLLKANFKAICYVKNQESTATWLAK-KGYEVEYK 273 (282)
T ss_dssp TEEE--EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHH-TTCEEECG
T ss_pred HCCE--EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHH-CCCEEEcc
Confidence 7777 999999 8999999999999999999999999999975 89999885
No 25
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.24 E-value=2.9e-10 Score=111.86 Aligned_cols=76 Identities=20% Similarity=0.253 Sum_probs=60.4
Q ss_pred ceeEEeccCH---HHHhccCCccceeeccCchhHHHHHHhCCceeccccccchhHHHHHHHHhhccceecCCCCCHHHHH
Q 011531 354 NRFIVSWAPQ---EEVLAHPAVGGFLTHGGWNSTLEGIAAGVPMICWPQFSDQLVNSRCVSEVWKIGFDMKDTCDGSIIE 430 (483)
Q Consensus 354 nv~~~~~~p~---~~ll~~~~~~~~ItHgG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~ 430 (483)
||.+.+++++ ..+|+.+++ ||+.+| |.+.||+++|+|+|+.+..+++... + + .|.|..++ .+.+.|+
T Consensus 256 ~v~~~g~~g~~~~~~~~~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~~---~-~-~g~g~lv~--~d~~~la 325 (376)
T 1v4v_A 256 NFVLLDPLEYGSMAALMRASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPEG---L-K-AGILKLAG--TDPEGVY 325 (376)
T ss_dssp TEEEECCCCHHHHHHHHHTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHHH---H-H-HTSEEECC--SCHHHHH
T ss_pred CEEEECCCCHHHHHHHHHhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchhh---h-c-CCceEECC--CCHHHHH
Confidence 4999966654 578877777 998883 4566999999999999877776652 3 4 58888774 4899999
Q ss_pred HHHHHHHhH
Q 011531 431 KLVRDLMEN 439 (483)
Q Consensus 431 ~~i~~ll~~ 439 (483)
++|.++++|
T Consensus 326 ~~i~~ll~d 334 (376)
T 1v4v_A 326 RVVKGLLEN 334 (376)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHHhC
Confidence 999999997
No 26
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.22 E-value=2.2e-10 Score=113.68 Aligned_cols=81 Identities=16% Similarity=0.126 Sum_probs=62.0
Q ss_pred ceeEEeccC---HHHHhccCCccceeeccCchhHHHHHHhCCceeccccccchhHHHHHHHHhhccceecCCCCCHHHHH
Q 011531 354 NRFIVSWAP---QEEVLAHPAVGGFLTHGGWNSTLEGIAAGVPMICWPQFSDQLVNSRCVSEVWKIGFDMKDTCDGSIIE 430 (483)
Q Consensus 354 nv~~~~~~p---~~~ll~~~~~~~~ItHgG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~ 430 (483)
|+.+.++++ ...+++.+++ +|+-.|.. ..||.++|+|+|++|-.++++. .+ + .|.|+.+. .+.+.|.
T Consensus 283 ~v~l~~~l~~~~~~~l~~~ad~--vv~~SGg~-~~EA~a~g~PvV~~~~~~~~~e---~v-~-~g~~~lv~--~d~~~l~ 352 (403)
T 3ot5_A 283 RIHLIEPLDAIDFHNFLRKSYL--VFTDSGGV-QEEAPGMGVPVLVLRDTTERPE---GI-E-AGTLKLIG--TNKENLI 352 (403)
T ss_dssp TEEEECCCCHHHHHHHHHHEEE--EEECCHHH-HHHGGGTTCCEEECCSSCSCHH---HH-H-HTSEEECC--SCHHHHH
T ss_pred CEEEeCCCCHHHHHHHHHhcCE--EEECCccH-HHHHHHhCCCEEEecCCCcchh---he-e-CCcEEEcC--CCHHHHH
Confidence 499999886 3568877777 99887533 3699999999999977666654 24 5 68887774 2899999
Q ss_pred HHHHHHHhHhHHHHHH
Q 011531 431 KLVRDLMENKREEIMG 446 (483)
Q Consensus 431 ~~i~~ll~~~~~~~~~ 446 (483)
++|.+++++ +..++
T Consensus 353 ~ai~~ll~~--~~~~~ 366 (403)
T 3ot5_A 353 KEALDLLDN--KESHD 366 (403)
T ss_dssp HHHHHHHHC--HHHHH
T ss_pred HHHHHHHcC--HHHHH
Confidence 999999997 55443
No 27
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.19 E-value=3.7e-10 Score=111.83 Aligned_cols=81 Identities=12% Similarity=0.103 Sum_probs=61.5
Q ss_pred ceeEEeccC---HHHHhccCCccceeeccCchhHHHHHHhCCceeccccccchhHHHHHHHHhhccceecCCCCCHHHHH
Q 011531 354 NRFIVSWAP---QEEVLAHPAVGGFLTHGGWNSTLEGIAAGVPMICWPQFSDQLVNSRCVSEVWKIGFDMKDTCDGSIIE 430 (483)
Q Consensus 354 nv~~~~~~p---~~~ll~~~~~~~~ItHgG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~ 430 (483)
|+.+.++++ ...+++.+++ +|+-.| |.+.||.++|+|+|++.-..+++. .+ + .|.++.+.. +++.|.
T Consensus 289 ~v~~~~~lg~~~~~~l~~~ad~--vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~e---~v-~-~G~~~lv~~--d~~~l~ 358 (396)
T 3dzc_A 289 NIVLIEPQQYLPFVYLMDRAHI--ILTDSG-GIQEEAPSLGKPVLVMRETTERPE---AV-A-AGTVKLVGT--NQQQIC 358 (396)
T ss_dssp TEEEECCCCHHHHHHHHHHCSE--EEESCS-GGGTTGGGGTCCEEECCSSCSCHH---HH-H-HTSEEECTT--CHHHHH
T ss_pred CEEEeCCCCHHHHHHHHHhcCE--EEECCc-cHHHHHHHcCCCEEEccCCCcchH---HH-H-cCceEEcCC--CHHHHH
Confidence 499988775 4568878887 999988 666899999999999865555532 34 5 588766642 699999
Q ss_pred HHHHHHHhHhHHHHHH
Q 011531 431 KLVRDLMENKREEIMG 446 (483)
Q Consensus 431 ~~i~~ll~~~~~~~~~ 446 (483)
++|.+++++ +..++
T Consensus 359 ~ai~~ll~d--~~~~~ 372 (396)
T 3dzc_A 359 DALSLLLTD--PQAYQ 372 (396)
T ss_dssp HHHHHHHHC--HHHHH
T ss_pred HHHHHHHcC--HHHHH
Confidence 999999997 54443
No 28
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.17 E-value=5.5e-09 Score=103.03 Aligned_cols=112 Identities=16% Similarity=0.091 Sum_probs=72.1
Q ss_pred CCceeEEeccCHHH---HhccCCccceee-----------ccCchhHHHHHHhCCceeccccccchhHHHHHHHHhhccc
Q 011531 352 ERNRFIVSWAPQEE---VLAHPAVGGFLT-----------HGGWNSTLEGIAAGVPMICWPQFSDQLVNSRCVSEVWKIG 417 (483)
Q Consensus 352 ~~nv~~~~~~p~~~---ll~~~~~~~~It-----------HgG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G 417 (483)
++ |.+.+|+|+.+ ++..+++ +|. -|.-.++.||+++|+|+|+.+..+ ....+ + .|.|
T Consensus 253 ~~-v~~~g~~~~~~~~~~~~~ad~--~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~----~~e~i-~-~~~g 323 (394)
T 3okp_A 253 QN-VKFLGRLEYQDMINTLAAADI--FAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGG----APETV-T-PATG 323 (394)
T ss_dssp GG-EEEEESCCHHHHHHHHHHCSE--EEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSSTT----GGGGC-C-TTTE
T ss_pred Ce-EEEcCCCCHHHHHHHHHhCCE--EEecCccccccccccccCcHHHHHHHcCCCEEEeCCCC----hHHHH-h-cCCc
Confidence 44 99999998544 7877887 665 455578999999999999977543 22234 3 3567
Q ss_pred eecCCCCCHHHHHHHHHHHHhHhHHHH-HHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHh
Q 011531 418 FDMKDTCDGSIIEKLVRDLMENKREEI-MGSTDRVATMARDAVNEGGSSYRNLDGLIEDIRLM 479 (483)
Q Consensus 418 ~~l~~~~~~~~l~~~i~~ll~~~~~~~-~~~a~~l~~~~~~~~~~gg~~~~~~~~l~~~l~~~ 479 (483)
..+ ..-+.++++++|.+++++ +.. ++-.++.++.+++ .-+....++++++-++..
T Consensus 324 ~~~-~~~d~~~l~~~i~~l~~~--~~~~~~~~~~~~~~~~~----~~s~~~~~~~~~~~~~~~ 379 (394)
T 3okp_A 324 LVV-EGSDVDKLSELLIELLDD--PIRRAAMGAAGRAHVEA----EWSWEIMGERLTNILQSE 379 (394)
T ss_dssp EEC-CTTCHHHHHHHHHHHHTC--HHHHHHHHHHHHHHHHH----HTBHHHHHHHHHHHHHSC
T ss_pred eEe-CCCCHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHH----hCCHHHHHHHHHHHHHHh
Confidence 766 445799999999999996 332 2222222232322 224445566666655544
No 29
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.14 E-value=2.2e-08 Score=100.35 Aligned_cols=94 Identities=16% Similarity=0.093 Sum_probs=64.8
Q ss_pred CCceeEEeccCH---HHHhccCCccceeec----cCchhHHHHHHhCCceeccccccchhHHHHHHHHhhccceecCCCC
Q 011531 352 ERNRFIVSWAPQ---EEVLAHPAVGGFLTH----GGWNSTLEGIAAGVPMICWPQFSDQLVNSRCVSEVWKIGFDMKDTC 424 (483)
Q Consensus 352 ~~nv~~~~~~p~---~~ll~~~~~~~~ItH----gG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~ 424 (483)
++ |.+.+++|+ ..++..+++ +|.- |.-.++.||+++|+|+|+.+. ......+.+ .+.|..+ ..-
T Consensus 306 ~~-v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~-~~~g~~~-~~~ 376 (438)
T 3c48_A 306 KR-IRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLVAMEAQASGTPVIAARV----GGLPIAVAE-GETGLLV-DGH 376 (438)
T ss_dssp TT-EEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHHTTCCEEEESC----TTHHHHSCB-TTTEEEE-SSC
T ss_pred Cc-EEEcCCCChHHHHHHHHhCCE--EEECccccCCchHHHHHHHcCCCEEecCC----CChhHHhhC-CCcEEEC-CCC
Confidence 44 999999986 457878887 6643 224589999999999999764 334445532 4567777 445
Q ss_pred CHHHHHHHHHHHHhHh--HHHHHHHHHHHHHH
Q 011531 425 DGSIIEKLVRDLMENK--REEIMGSTDRVATM 454 (483)
Q Consensus 425 ~~~~l~~~i~~ll~~~--~~~~~~~a~~l~~~ 454 (483)
+.++++++|.+++++. ...+.+++++..+.
T Consensus 377 d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~ 408 (438)
T 3c48_A 377 SPHAWADALATLLDDDETRIRMGEDAVEHART 408 (438)
T ss_dssp CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHh
Confidence 8999999999999951 12344455544444
No 30
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.12 E-value=2.6e-09 Score=105.23 Aligned_cols=129 Identities=16% Similarity=0.130 Sum_probs=82.4
Q ss_pred CCeEEEEecCcccCCCHHHHHHHHHHHHhC-----CCeEEEEEcCCccCCCCCCCCCChhhhhhc--CCCceeEEeccCH
Q 011531 291 PKSVLYVSFGSLVGLTREQMSELWHGLVNR-----GQRFLLVVRPDLILGEPGAAETPLAQNEGT--EERNRFIVSWAPQ 363 (483)
Q Consensus 291 ~~~vi~vs~Gs~~~~~~~~~~~~~~a~~~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~--~~~nv~~~~~~p~ 363 (483)
++++++++.|....... .+..+++++..+ +.++++... ........+.+.. .++ |.+.+++++
T Consensus 204 ~~~~vl~~~gr~~~~~k-g~~~li~a~~~l~~~~~~~~l~i~~g--------~~~~~~~~l~~~~~~~~~-v~~~g~~~~ 273 (384)
T 1vgv_A 204 DKKMILVTGHRRESFGR-GFEEICHALADIATTHQDIQIVYPVH--------LNPNVREPVNRILGHVKN-VILIDPQEY 273 (384)
T ss_dssp TSEEEEEECCCBSSCCH-HHHHHHHHHHHHHHHCTTEEEEEECC--------BCHHHHHHHHHHHTTCTT-EEEECCCCH
T ss_pred CCCEEEEEeCCccccch-HHHHHHHHHHHHHhhCCCeEEEEEcC--------CCHHHHHHHHHHhhcCCC-EEEeCCCCH
Confidence 45678888887654322 234455555432 344444331 1000112222211 234 999777764
Q ss_pred ---HHHhccCCccceeeccCchhHHHHHHhCCceeccccccchhHHHHHHHHhhccceecCCCCCHHHHHHHHHHHHhH
Q 011531 364 ---EEVLAHPAVGGFLTHGGWNSTLEGIAAGVPMICWPQFSDQLVNSRCVSEVWKIGFDMKDTCDGSIIEKLVRDLMEN 439 (483)
Q Consensus 364 ---~~ll~~~~~~~~ItHgG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~~i~~ll~~ 439 (483)
..+++.+++ ||+.+| |.+.||+++|+|+|+.+..++... .+ + .|.|..++. +.++|+++|.++++|
T Consensus 274 ~~~~~~~~~ad~--~v~~Sg-~~~lEA~a~G~PvI~~~~~~~~~e---~v-~-~g~g~lv~~--d~~~la~~i~~ll~d 342 (384)
T 1vgv_A 274 LPFVWLMNHAWL--ILTDSG-GIQEEAPSLGKPVLVMRDTTERPE---AV-T-AGTVRLVGT--DKQRIVEEVTRLLKD 342 (384)
T ss_dssp HHHHHHHHHCSE--EEESSS-TGGGTGGGGTCCEEEESSCCSCHH---HH-H-HTSEEEECS--SHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhCcE--EEECCc-chHHHHHHcCCCEEEccCCCCcch---hh-h-CCceEEeCC--CHHHHHHHHHHHHhC
Confidence 567878887 998885 458899999999999987554433 23 4 588888854 899999999999997
No 31
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.08 E-value=2.9e-08 Score=99.22 Aligned_cols=77 Identities=12% Similarity=0.024 Sum_probs=56.6
Q ss_pred CceeEEeccCHHH---HhccCCccceeec----cCchhHHHHHHhCCceeccccccchhHHHHHHHHhhccceecCCCCC
Q 011531 353 RNRFIVSWAPQEE---VLAHPAVGGFLTH----GGWNSTLEGIAAGVPMICWPQFSDQLVNSRCVSEVWKIGFDMKDTCD 425 (483)
Q Consensus 353 ~nv~~~~~~p~~~---ll~~~~~~~~ItH----gG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~ 425 (483)
+++.+.+|+|+.+ +++.+++ +|.- |--.++.||+++|+|+|+... ......+ + .|.|..+ ..-+
T Consensus 311 ~~~~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~Pvi~s~~----~~~~e~~-~-~~~g~~~-~~~d 381 (439)
T 3fro_A 311 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII-T-NETGILV-KAGD 381 (439)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECBSCCSSCHHHHHHHHTTCEEEEESS----THHHHHC-C-TTTCEEE-CTTC
T ss_pred CEEEEcCCCCHHHHHHHHHHCCE--EEeCCCCCCccHHHHHHHHCCCCeEEcCC----CCcceeE-E-cCceEEe-CCCC
Confidence 4366779999754 6777777 6632 333699999999999999754 3344455 3 4688777 4458
Q ss_pred HHHHHHHHHHHHh
Q 011531 426 GSIIEKLVRDLME 438 (483)
Q Consensus 426 ~~~l~~~i~~ll~ 438 (483)
.++++++|.++++
T Consensus 382 ~~~la~~i~~ll~ 394 (439)
T 3fro_A 382 PGELANAILKALE 394 (439)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999999999998
No 32
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.06 E-value=8.6e-08 Score=94.85 Aligned_cols=78 Identities=12% Similarity=0.138 Sum_probs=59.8
Q ss_pred ceeEEeccCH---HHHhccCCccceee----ccCc-hhHHHHHHhCCceeccccccchhHHHHHHHHhhccceecCCCCC
Q 011531 354 NRFIVSWAPQ---EEVLAHPAVGGFLT----HGGW-NSTLEGIAAGVPMICWPQFSDQLVNSRCVSEVWKIGFDMKDTCD 425 (483)
Q Consensus 354 nv~~~~~~p~---~~ll~~~~~~~~It----HgG~-gs~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~ 425 (483)
||.+.+++|+ ..++..+++ +|. +.|. .++.||+++|+|+|+.+. ......+.+ .+.|..+ ..-+
T Consensus 264 ~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i~~-~~~g~~~-~~~d 335 (406)
T 2gek_A 264 HLRFLGQVDDATKASAMRSADV--YCAPHLGGESFGIVLVEAMAAGTAVVASDL----DAFRRVLAD-GDAGRLV-PVDD 335 (406)
T ss_dssp GEEECCSCCHHHHHHHHHHSSE--EEECCCSCCSSCHHHHHHHHHTCEEEECCC----HHHHHHHTT-TTSSEEC-CTTC
T ss_pred cEEEEecCCHHHHHHHHHHCCE--EEecCCCCCCCchHHHHHHHcCCCEEEecC----CcHHHHhcC-CCceEEe-CCCC
Confidence 4999999996 468888888 553 3444 489999999999999765 445556632 4677777 3457
Q ss_pred HHHHHHHHHHHHhH
Q 011531 426 GSIIEKLVRDLMEN 439 (483)
Q Consensus 426 ~~~l~~~i~~ll~~ 439 (483)
.+++.++|.+++++
T Consensus 336 ~~~l~~~i~~l~~~ 349 (406)
T 2gek_A 336 ADGMAAALIGILED 349 (406)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHcC
Confidence 89999999999986
No 33
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.05 E-value=2e-08 Score=98.46 Aligned_cols=80 Identities=20% Similarity=0.206 Sum_probs=60.2
Q ss_pred ceeEEeccCH---HHHhccCCccceeeccCchhHHHHHHhCCceeccccccchhHHHHHHHHhhccceecCCCCCHHHHH
Q 011531 354 NRFIVSWAPQ---EEVLAHPAVGGFLTHGGWNSTLEGIAAGVPMICWPQFSDQLVNSRCVSEVWKIGFDMKDTCDGSIIE 430 (483)
Q Consensus 354 nv~~~~~~p~---~~ll~~~~~~~~ItHgG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~ 430 (483)
||.+.+++++ ..+++.+++ +|+..| |.+.||+++|+|+|+....+..+ ..+ + .|.|..++ . +.++|+
T Consensus 264 ~v~~~g~~~~~~~~~~~~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~~---e~v-~-~g~g~~v~-~-d~~~la 333 (375)
T 3beo_A 264 RIHLIEPLDVIDFHNVAARSYL--MLTDSG-GVQEEAPSLGVPVLVLRDTTERP---EGI-E-AGTLKLAG-T-DEETIF 333 (375)
T ss_dssp TEEEECCCCHHHHHHHHHTCSE--EEECCH-HHHHHHHHHTCCEEECSSCCSCH---HHH-H-TTSEEECC-S-CHHHHH
T ss_pred CEEEeCCCCHHHHHHHHHhCcE--EEECCC-ChHHHHHhcCCCEEEecCCCCCc---eee-c-CCceEEcC-C-CHHHHH
Confidence 4999887775 467877777 888863 56889999999999986544432 234 4 58888875 3 899999
Q ss_pred HHHHHHHhHhHHHHH
Q 011531 431 KLVRDLMENKREEIM 445 (483)
Q Consensus 431 ~~i~~ll~~~~~~~~ 445 (483)
++|.++++| ++.+
T Consensus 334 ~~i~~ll~~--~~~~ 346 (375)
T 3beo_A 334 SLADELLSD--KEAH 346 (375)
T ss_dssp HHHHHHHHC--HHHH
T ss_pred HHHHHHHhC--hHhH
Confidence 999999997 5433
No 34
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=98.97 E-value=4e-08 Score=100.42 Aligned_cols=80 Identities=18% Similarity=0.172 Sum_probs=58.0
Q ss_pred CCCceeEEeccCHH---HHhccC----Cccceeec---cCc-hhHHHHHHhCCceeccccccchhHHHHHHHHhhcccee
Q 011531 351 EERNRFIVSWAPQE---EVLAHP----AVGGFLTH---GGW-NSTLEGIAAGVPMICWPQFSDQLVNSRCVSEVWKIGFD 419 (483)
Q Consensus 351 ~~~nv~~~~~~p~~---~ll~~~----~~~~~ItH---gG~-gs~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~ 419 (483)
.++ |.+.+++|+. .+++.+ ++ +|.- -|. .++.||+++|+|+|+... ......+.+ -..|..
T Consensus 334 ~~~-V~~~G~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~~----~g~~e~v~~-~~~g~l 405 (499)
T 2r60_A 334 RGK-VSMFPLNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTRN----GGPAEILDG-GKYGVL 405 (499)
T ss_dssp BTT-EEEEECCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEESS----BHHHHHTGG-GTSSEE
T ss_pred Cce-EEECCCCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEecC----CCHHHHhcC-CceEEE
Confidence 345 9999999864 467677 76 6632 233 589999999999999864 234445532 346777
Q ss_pred cCCCCCHHHHHHHHHHHHhH
Q 011531 420 MKDTCDGSIIEKLVRDLMEN 439 (483)
Q Consensus 420 l~~~~~~~~l~~~i~~ll~~ 439 (483)
+ ..-+.++++++|.+++++
T Consensus 406 ~-~~~d~~~la~~i~~ll~~ 424 (499)
T 2r60_A 406 V-DPEDPEDIARGLLKAFES 424 (499)
T ss_dssp E-CTTCHHHHHHHHHHHHSC
T ss_pred e-CCCCHHHHHHHHHHHHhC
Confidence 7 345889999999999986
No 35
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=98.90 E-value=1.3e-07 Score=92.40 Aligned_cols=79 Identities=16% Similarity=0.238 Sum_probs=61.8
Q ss_pred ceeEEeccC-HHHHhccCCccceee----ccCchhHHHHHHhCCceeccccccchhHHHHHHHHhhccceecCCCCCHHH
Q 011531 354 NRFIVSWAP-QEEVLAHPAVGGFLT----HGGWNSTLEGIAAGVPMICWPQFSDQLVNSRCVSEVWKIGFDMKDTCDGSI 428 (483)
Q Consensus 354 nv~~~~~~p-~~~ll~~~~~~~~It----HgG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~ 428 (483)
||.+.++.. ...++..+++ +|. -|.-.++.||+++|+|+|+.+.. .+...+.+ .+.|..++..-+.++
T Consensus 254 ~v~~~g~~~~~~~~~~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~----~~~e~i~~-~~~g~~~~~~~~~~~ 326 (374)
T 2iw1_A 254 NVHFFSGRNDVSELMAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAVC----GYAHYIAD-ANCGTVIAEPFSQEQ 326 (374)
T ss_dssp GEEEESCCSCHHHHHHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETTS----TTTHHHHH-HTCEEEECSSCCHHH
T ss_pred cEEECCCcccHHHHHHhcCE--EEeccccCCcccHHHHHHHCCCCEEEecCC----Cchhhhcc-CCceEEeCCCCCHHH
Confidence 499998865 3668888887 665 45567899999999999998763 34456644 588888854668999
Q ss_pred HHHHHHHHHhH
Q 011531 429 IEKLVRDLMEN 439 (483)
Q Consensus 429 l~~~i~~ll~~ 439 (483)
++++|.+++++
T Consensus 327 l~~~i~~l~~~ 337 (374)
T 2iw1_A 327 LNEVLRKALTQ 337 (374)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHcC
Confidence 99999999986
No 36
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=98.86 E-value=1.2e-07 Score=91.66 Aligned_cols=122 Identities=15% Similarity=0.103 Sum_probs=77.5
Q ss_pred EEEecCcccCCCHHHHHHHHHHHHhCCCeEEEEEcCCccCCCCCCCCCChhhh---hhcCCCceeEEeccCHH---HHhc
Q 011531 295 LYVSFGSLVGLTREQMSELWHGLVNRGQRFLLVVRPDLILGEPGAAETPLAQN---EGTEERNRFIVSWAPQE---EVLA 368 (483)
Q Consensus 295 i~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~---~~~~~~nv~~~~~~p~~---~ll~ 368 (483)
+++..|.... ...+..++++++..+.++++ ++. | ...+.+. ++..++ |.+.+|+|+. .++.
T Consensus 164 ~i~~vG~~~~--~Kg~~~li~a~~~~~~~l~i-~G~------g---~~~~~l~~~~~~~~~~-v~~~g~~~~~~l~~~~~ 230 (342)
T 2iuy_A 164 FLLFMGRVSP--HKGALEAAAFAHACGRRLVL-AGP------A---WEPEYFDEITRRYGST-VEPIGEVGGERRLDLLA 230 (342)
T ss_dssp CEEEESCCCG--GGTHHHHHHHHHHHTCCEEE-ESC------C---CCHHHHHHHHHHHTTT-EEECCCCCHHHHHHHHH
T ss_pred EEEEEecccc--ccCHHHHHHHHHhcCcEEEE-EeC------c---ccHHHHHHHHHHhCCC-EEEeccCCHHHHHHHHH
Confidence 3445676552 22345566666666666544 421 1 1112222 223355 9999999965 6888
Q ss_pred cCCcccee--ec-----------cCc-hhHHHHHHhCCceeccccccchhHHHHHHHHh--hccceecCCCCCHHHHHHH
Q 011531 369 HPAVGGFL--TH-----------GGW-NSTLEGIAAGVPMICWPQFSDQLVNSRCVSEV--WKIGFDMKDTCDGSIIEKL 432 (483)
Q Consensus 369 ~~~~~~~I--tH-----------gG~-gs~~eal~~GvP~l~~P~~~DQ~~na~~v~~~--~G~G~~l~~~~~~~~l~~~ 432 (483)
.+++ +| +. -|. .++.||+++|+|+|+.... .....+ +. -+.|..+ .. +.++++++
T Consensus 231 ~adv--~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~----~~~e~~-~~~~~~~g~~~-~~-d~~~l~~~ 301 (342)
T 2iuy_A 231 SAHA--VLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNG----CLAEIV-PSVGEVVGYGT-DF-APDEARRT 301 (342)
T ss_dssp HCSE--EEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTT----THHHHG-GGGEEECCSSS-CC-CHHHHHHH
T ss_pred hCCE--EEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCC----ChHHHh-cccCCCceEEc-CC-CHHHHHHH
Confidence 8887 55 32 343 5899999999999998763 344455 32 2467666 44 99999999
Q ss_pred HHHHHh
Q 011531 433 VRDLME 438 (483)
Q Consensus 433 i~~ll~ 438 (483)
|.++++
T Consensus 302 i~~l~~ 307 (342)
T 2iuy_A 302 LAGLPA 307 (342)
T ss_dssp HHTSCC
T ss_pred HHHHHH
Confidence 999986
No 37
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=98.85 E-value=7.5e-07 Score=87.84 Aligned_cols=78 Identities=18% Similarity=0.163 Sum_probs=56.9
Q ss_pred ceeEEeccC-HHHHhccCCcccee----eccCchhHHHHHHhCCceeccccccchhHHHHHHHHhhccceecCCCCCHHH
Q 011531 354 NRFIVSWAP-QEEVLAHPAVGGFL----THGGWNSTLEGIAAGVPMICWPQFSDQLVNSRCVSEVWKIGFDMKDTCDGSI 428 (483)
Q Consensus 354 nv~~~~~~p-~~~ll~~~~~~~~I----tHgG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~ 428 (483)
||.+.++.. ...++..+++ +| .-|.-.++.||+++|+|+|+.+..+ ....+ +..+.|..++ .-+.++
T Consensus 268 ~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~PvI~~~~~~----~~e~v-~~~~~g~~~~-~~d~~~ 339 (394)
T 2jjm_A 268 RVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGVPCIGTRVGG----IPEVI-QHGDTGYLCE-VGDTTG 339 (394)
T ss_dssp GBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTCCEEEECCTT----STTTC-CBTTTEEEEC-TTCHHH
T ss_pred eEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCCCEEEecCCC----hHHHh-hcCCceEEeC-CCCHHH
Confidence 388888765 3678978887 77 4455679999999999999987532 22233 2235676663 448899
Q ss_pred HHHHHHHHHhH
Q 011531 429 IEKLVRDLMEN 439 (483)
Q Consensus 429 l~~~i~~ll~~ 439 (483)
++++|.++++|
T Consensus 340 la~~i~~l~~~ 350 (394)
T 2jjm_A 340 VADQAIQLLKD 350 (394)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHcC
Confidence 99999999996
No 38
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.78 E-value=7.5e-08 Score=94.60 Aligned_cols=127 Identities=11% Similarity=0.076 Sum_probs=82.4
Q ss_pred CeEEEEecCcccCCC-HHHHHHHHHHHHhC----CCeEEEEEcCCccCCCCCCCCCChhhhhh---c--CCCceeEEecc
Q 011531 292 KSVLYVSFGSLVGLT-REQMSELWHGLVNR----GQRFLLVVRPDLILGEPGAAETPLAQNEG---T--EERNRFIVSWA 361 (483)
Q Consensus 292 ~~vi~vs~Gs~~~~~-~~~~~~~~~a~~~~----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~nv~~~~~~ 361 (483)
+++|+++.|...... ...+..+++++..+ +..+|+...+ .+...+.+. . .. |+.+.+.+
T Consensus 203 ~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p----------~~~~~l~~~~~~~~~~~-~v~l~~~l 271 (385)
T 4hwg_A 203 KQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHP----------RTKKRLEDLEGFKELGD-KIRFLPAF 271 (385)
T ss_dssp TSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECH----------HHHHHHHTSGGGGGTGG-GEEECCCC
T ss_pred CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECCh----------HHHHHHHHHHHHhcCCC-CEEEEcCC
Confidence 568888887654332 23455666666543 5677776521 111111111 1 12 48887666
Q ss_pred C---HHHHhccCCccceeeccCchhHHHHHHhCCceeccccccchhHHHHHHHHhhccceecCCCCCHHHHHHHHHHHHh
Q 011531 362 P---QEEVLAHPAVGGFLTHGGWNSTLEGIAAGVPMICWPQFSDQLVNSRCVSEVWKIGFDMKDTCDGSIIEKLVRDLME 438 (483)
Q Consensus 362 p---~~~ll~~~~~~~~ItHgG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~~i~~ll~ 438 (483)
+ ...+++++++ +|+-.|. .+.||.+.|+|+|.++...+.+. .+ + .|.++.+. .+++.|.+++.++|+
T Consensus 272 g~~~~~~l~~~adl--vvt~SGg-v~~EA~alG~Pvv~~~~~ter~e---~v-~-~G~~~lv~--~d~~~i~~ai~~ll~ 341 (385)
T 4hwg_A 272 SFTDYVKLQMNAFC--ILSDSGT-ITEEASILNLPALNIREAHERPE---GM-D-AGTLIMSG--FKAERVLQAVKTITE 341 (385)
T ss_dssp CHHHHHHHHHHCSE--EEECCTT-HHHHHHHTTCCEEECSSSCSCTH---HH-H-HTCCEECC--SSHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHhCcE--EEECCcc-HHHHHHHcCCCEEEcCCCccchh---hh-h-cCceEEcC--CCHHHHHHHHHHHHh
Confidence 5 4568988887 9999875 46999999999999987654232 24 5 68777663 379999999999998
Q ss_pred H
Q 011531 439 N 439 (483)
Q Consensus 439 ~ 439 (483)
+
T Consensus 342 d 342 (385)
T 4hwg_A 342 E 342 (385)
T ss_dssp T
T ss_pred C
Confidence 6
No 39
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=98.65 E-value=5.8e-06 Score=82.03 Aligned_cols=76 Identities=14% Similarity=0.072 Sum_probs=57.0
Q ss_pred ceeEEeccC---H---HHHhccCCccceeecc----CchhHHHHHHhCCceeccccccchhHHHHHHHHhhccceecCCC
Q 011531 354 NRFIVSWAP---Q---EEVLAHPAVGGFLTHG----GWNSTLEGIAAGVPMICWPQFSDQLVNSRCVSEVWKIGFDMKDT 423 (483)
Q Consensus 354 nv~~~~~~p---~---~~ll~~~~~~~~ItHg----G~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~ 423 (483)
||.+.+|++ + ..+++.+++ +|.-. .-.++.||+++|+|+|+.+. ..+...+.+ .+.|..++
T Consensus 294 ~V~~~G~~~~~~~~~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~-~~~g~l~~-- 364 (416)
T 2x6q_A 294 DVKVLTNLIGVHAREVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIVD-GETGFLVR-- 364 (416)
T ss_dssp TEEEEEGGGTCCHHHHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCCB-TTTEEEES--
T ss_pred cEEEecccCCCCHHHHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhheec-CCCeEEEC--
Confidence 499999876 2 457877777 66543 34689999999999999765 334555532 45777774
Q ss_pred CCHHHHHHHHHHHHhH
Q 011531 424 CDGSIIEKLVRDLMEN 439 (483)
Q Consensus 424 ~~~~~l~~~i~~ll~~ 439 (483)
+.++++++|.+++++
T Consensus 365 -d~~~la~~i~~ll~~ 379 (416)
T 2x6q_A 365 -DANEAVEVVLYLLKH 379 (416)
T ss_dssp -SHHHHHHHHHHHHHC
T ss_pred -CHHHHHHHHHHHHhC
Confidence 899999999999996
No 40
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.55 E-value=2.7e-06 Score=90.82 Aligned_cols=77 Identities=16% Similarity=0.195 Sum_probs=51.6
Q ss_pred CCceeEEe----ccCHHHHhc----cCCccceeec----cCchhHHHHHHhCCceeccccccchhHHHHHHHHhhcccee
Q 011531 352 ERNRFIVS----WAPQEEVLA----HPAVGGFLTH----GGWNSTLEGIAAGVPMICWPQFSDQLVNSRCVSEVWKIGFD 419 (483)
Q Consensus 352 ~~nv~~~~----~~p~~~ll~----~~~~~~~ItH----gG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~ 419 (483)
++ |.+.+ ++|+.++.. .+++ +|.- |--.++.||+++|+|+|+... ......+.+ -+.|..
T Consensus 640 ~~-V~flG~~~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIasd~----GG~~EiV~d-g~~Gll 711 (816)
T 3s28_A 640 GQ-FRWISSQMDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFATCK----GGPAEIIVH-GKSGFH 711 (816)
T ss_dssp BB-EEEECCCCCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEESS----BTHHHHCCB-TTTBEE
T ss_pred Cc-EEEccCccccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEeCC----CChHHHHcc-CCcEEE
Confidence 44 88887 445555543 3455 6632 234699999999999999643 334445533 456777
Q ss_pred cCCCCCHHHHHHHHHHHH
Q 011531 420 MKDTCDGSIIEKLVRDLM 437 (483)
Q Consensus 420 l~~~~~~~~l~~~i~~ll 437 (483)
+ +.-+.+.++++|.+++
T Consensus 712 v-~p~D~e~LA~aI~~lL 728 (816)
T 3s28_A 712 I-DPYHGDQAADTLADFF 728 (816)
T ss_dssp E-CTTSHHHHHHHHHHHH
T ss_pred e-CCCCHHHHHHHHHHHH
Confidence 7 4458899999998776
No 41
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.49 E-value=0.00062 Score=70.28 Aligned_cols=82 Identities=12% Similarity=0.110 Sum_probs=59.5
Q ss_pred CCceeEEeccCHH---HHhccCCcccee--e-ccCchhHHHHHHhCCceeccccccchhHH-HHHHHHhhccceecCCCC
Q 011531 352 ERNRFIVSWAPQE---EVLAHPAVGGFL--T-HGGWNSTLEGIAAGVPMICWPQFSDQLVN-SRCVSEVWKIGFDMKDTC 424 (483)
Q Consensus 352 ~~nv~~~~~~p~~---~ll~~~~~~~~I--t-HgG~gs~~eal~~GvP~l~~P~~~DQ~~n-a~~v~~~~G~G~~l~~~~ 424 (483)
++ |.+.+++|+. .++..+++ || + .|+-.++.||+++|+|+|++|-..-.... +..+. ..|+...+..
T Consensus 434 ~~-v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~-~~g~~e~v~~-- 507 (568)
T 2vsy_A 434 QR-LVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNH-HLGLDEMNVA-- 507 (568)
T ss_dssp GG-EEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHH-HHTCGGGBCS--
T ss_pred hH-EEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHH-HCCChhhhcC--
Confidence 44 9999999854 56877777 65 2 25567899999999999998753211112 34453 3677776644
Q ss_pred CHHHHHHHHHHHHhH
Q 011531 425 DGSIIEKLVRDLMEN 439 (483)
Q Consensus 425 ~~~~l~~~i~~ll~~ 439 (483)
+.+.+.+++.++++|
T Consensus 508 ~~~~la~~i~~l~~~ 522 (568)
T 2vsy_A 508 DDAAFVAKAVALASD 522 (568)
T ss_dssp SHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHhcC
Confidence 899999999999997
No 42
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.31 E-value=0.0001 Score=74.52 Aligned_cols=125 Identities=12% Similarity=0.023 Sum_probs=73.2
Q ss_pred EEEecCcccC-CCHHHHHHHHHHHHhCCCeEEEEEcCCccCCCCCCCCCChhhhh---hcCCCcee-EEeccCHH---HH
Q 011531 295 LYVSFGSLVG-LTREQMSELWHGLVNRGQRFLLVVRPDLILGEPGAAETPLAQNE---GTEERNRF-IVSWAPQE---EV 366 (483)
Q Consensus 295 i~vs~Gs~~~-~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~---~~~~~nv~-~~~~~p~~---~l 366 (483)
+++..|.... -..+.+...+..+.+.+.+++++-. |. ......+.+ +..++ |. +.++ +.+ .+
T Consensus 293 ~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~-------g~-~~~~~~l~~~~~~~~~~-v~~~~g~-~~~~~~~~ 362 (485)
T 1rzu_A 293 LFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGA-------GD-VALEGALLAAASRHHGR-VGVAIGY-NEPLSHLM 362 (485)
T ss_dssp EEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEEC-------BC-HHHHHHHHHHHHHTTTT-EEEEESC-CHHHHHHH
T ss_pred EEEEEccCccccCHHHHHHHHHHHHhcCceEEEEeC-------Cc-hHHHHHHHHHHHhCCCc-EEEecCC-CHHHHHHH
Confidence 6677787764 2234333333333333556554432 11 001122221 23344 87 5777 543 57
Q ss_pred hccCCccceeec----cCchhHHHHHHhCCceeccccccchhHHHHHHHHhh---------ccceecCCCCCHHHHHHHH
Q 011531 367 LAHPAVGGFLTH----GGWNSTLEGIAAGVPMICWPQFSDQLVNSRCVSEVW---------KIGFDMKDTCDGSIIEKLV 433 (483)
Q Consensus 367 l~~~~~~~~ItH----gG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~---------G~G~~l~~~~~~~~l~~~i 433 (483)
++.+++ +|.- |--.++.||+++|+|+|+... ......+ +.- +.|..+ ..-+.++++++|
T Consensus 363 ~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v-~~~~~~~~~~~~~~G~l~-~~~d~~~la~~i 434 (485)
T 1rzu_A 363 QAGCDA--IIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTV-IDANHAALASKAATGVQF-SPVTLDGLKQAI 434 (485)
T ss_dssp HHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHC-CBCCHHHHHTTCCCBEEE-SSCSHHHHHHHH
T ss_pred HhcCCE--EEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhhee-cccccccccccCCcceEe-CCCCHHHHHHHH
Confidence 878887 6632 334589999999999999765 2344444 312 467777 445889999999
Q ss_pred HHHH
Q 011531 434 RDLM 437 (483)
Q Consensus 434 ~~ll 437 (483)
.+++
T Consensus 435 ~~ll 438 (485)
T 1rzu_A 435 RRTV 438 (485)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9999
No 43
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.16 E-value=9.1e-05 Score=73.19 Aligned_cols=108 Identities=12% Similarity=0.026 Sum_probs=64.3
Q ss_pred eeEEeccCH---HHHhccCCccceee--c--cCchhHHHHHHhCCceeccccccchhHHHHHHHHhhcc-----------
Q 011531 355 RFIVSWAPQ---EEVLAHPAVGGFLT--H--GGWNSTLEGIAAGVPMICWPQFSDQLVNSRCVSEVWKI----------- 416 (483)
Q Consensus 355 v~~~~~~p~---~~ll~~~~~~~~It--H--gG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~----------- 416 (483)
+.+.+|+|+ ..++..+++ +|. . |.-.++.||+++|+|+|+.... .....+ + -|.
T Consensus 256 v~~~g~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~~----g~~e~v-~-~~~~~~i~~~~~~~ 327 (413)
T 3oy2_A 256 MINRTVLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISAVG----GADDYF-S-GDCVYKIKPSAWIS 327 (413)
T ss_dssp EEECSCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEECCH----HHHHHS-C-TTTSEEECCCEEEE
T ss_pred eeccCcCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcCCC----ChHHHH-c-cCcccccccccccc
Confidence 556699984 447877887 553 2 2335899999999999986542 334444 2 233
Q ss_pred -----ce--ecCCCCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 011531 417 -----GF--DMKDTCDGSIIEKLVRDLMENKREEIMGSTDRVATMARDAVNEGGSSYRNLDGLIEDIR 477 (483)
Q Consensus 417 -----G~--~l~~~~~~~~l~~~i~~ll~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~l~~~l~ 477 (483)
|. .++ .-+.++++++| +++++ +..+ +++++..++...+.-+....++++.+-++
T Consensus 328 ~~~~~G~~gl~~-~~d~~~la~~i-~l~~~--~~~~---~~~~~~a~~~~~~~fs~~~~~~~~~~~~~ 388 (413)
T 3oy2_A 328 VDDRDGIGGIEG-IIDVDDLVEAF-TFFKD--EKNR---KEYGKRVQDFVKTKPTWDDISSDIIDFFN 388 (413)
T ss_dssp CTTTCSSCCEEE-ECCHHHHHHHH-HHTTS--HHHH---HHHHHHHHHHHTTSCCHHHHHHHHHHHHH
T ss_pred cccccCcceeeC-CCCHHHHHHHH-HHhcC--HHHH---HHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 44 442 34899999999 99996 4433 33333333332223343444444444444
No 44
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.13 E-value=9.2e-06 Score=70.35 Aligned_cols=127 Identities=11% Similarity=0.120 Sum_probs=80.2
Q ss_pred EEEecCcccCCCHHHHHHHHHHHHhC-CCeEEEEEcCCccCCCCCCCCCChhhh---hhcCCCceeEEeccCH---HHHh
Q 011531 295 LYVSFGSLVGLTREQMSELWHGLVNR-GQRFLLVVRPDLILGEPGAAETPLAQN---EGTEERNRFIVSWAPQ---EEVL 367 (483)
Q Consensus 295 i~vs~Gs~~~~~~~~~~~~~~a~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~---~~~~~~nv~~~~~~p~---~~ll 367 (483)
+++..|+... ...+..++++++.. +.+++++-... ....+..... ...+++ |.+.+|+|+ ..++
T Consensus 25 ~i~~~G~~~~--~Kg~~~li~a~~~l~~~~l~i~G~~~------~~~~l~~~~~~~~~~l~~~-v~~~g~~~~~e~~~~~ 95 (177)
T 2f9f_A 25 FWLSVNRIYP--EKRIELQLEVFKKLQDEKLYIVGWFS------KGDHAERYARKIMKIAPDN-VKFLGSVSEEELIDLY 95 (177)
T ss_dssp CEEEECCSSG--GGTHHHHHHHHHHCTTSCEEEEBCCC------TTSTHHHHHHHHHHHSCTT-EEEEESCCHHHHHHHH
T ss_pred EEEEEecccc--ccCHHHHHHHHHhCCCcEEEEEecCc------cHHHHHHHHHhhhcccCCc-EEEeCCCCHHHHHHHH
Confidence 4456676653 22345566777666 44555443211 0001111111 113345 999999997 5688
Q ss_pred ccCCccceee---ccCc-hhHHHHHHhCCceeccccccchhHHHHHHHHhhccceecCCCCCHHHHHHHHHHHHhH
Q 011531 368 AHPAVGGFLT---HGGW-NSTLEGIAAGVPMICWPQFSDQLVNSRCVSEVWKIGFDMKDTCDGSIIEKLVRDLMEN 439 (483)
Q Consensus 368 ~~~~~~~~It---HgG~-gs~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~~i~~ll~~ 439 (483)
..+++ +|. +.|. .++.||+++|+|+|+... ..+...+. ..+.|..+ .-+.++++++|.+++++
T Consensus 96 ~~adi--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~-~~~~g~~~--~~d~~~l~~~i~~l~~~ 162 (177)
T 2f9f_A 96 SRCKG--LLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETVI-NEKTGYLV--NADVNEIIDAMKKVSKN 162 (177)
T ss_dssp HHCSE--EEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHCC-BTTTEEEE--CSCHHHHHHHHHHHHHC
T ss_pred HhCCE--EEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHhc-CCCccEEe--CCCHHHHHHHHHHHHhC
Confidence 88887 665 3444 499999999999999754 44555553 24577776 46899999999999986
No 45
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.09 E-value=0.00038 Score=70.34 Aligned_cols=77 Identities=12% Similarity=0.094 Sum_probs=53.3
Q ss_pred CCcee-EEeccCH--HHHhccCCccceeec----cCchhHHHHHHhCCceeccccccchhHHHHHHHHhh---------c
Q 011531 352 ERNRF-IVSWAPQ--EEVLAHPAVGGFLTH----GGWNSTLEGIAAGVPMICWPQFSDQLVNSRCVSEVW---------K 415 (483)
Q Consensus 352 ~~nv~-~~~~~p~--~~ll~~~~~~~~ItH----gG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~---------G 415 (483)
++ |. +.++... ..+++.+++ +|.- |.-.++.||+++|+|+|+... ......+ +.- +
T Consensus 347 ~~-v~~~~g~~~~~~~~~~~~adv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v-~~~~~~~~~~~~~ 418 (485)
T 2qzs_A 347 GQ-VGVQIGYHEAFSHRIMGGADV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTV-SDCSLENLADGVA 418 (485)
T ss_dssp TT-EEEEESCCHHHHHHHHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHC-CBCCHHHHHTTCC
T ss_pred Cc-EEEeCCCCHHHHHHHHHhCCE--EEECCccCCCcHHHHHHHHCCCCEEECCC----CCcccee-ccCcccccccccc
Confidence 44 86 6777332 357888887 6632 334588999999999999864 2344444 322 4
Q ss_pred cceecCCCCCHHHHHHHHHHHH
Q 011531 416 IGFDMKDTCDGSIIEKLVRDLM 437 (483)
Q Consensus 416 ~G~~l~~~~~~~~l~~~i~~ll 437 (483)
.|..+ ..-+.++++++|.+++
T Consensus 419 ~G~l~-~~~d~~~la~~i~~ll 439 (485)
T 2qzs_A 419 SGFVF-EDSNAWSLLRAIRRAF 439 (485)
T ss_dssp CBEEE-CSSSHHHHHHHHHHHH
T ss_pred ceEEE-CCCCHHHHHHHHHHHH
Confidence 67777 4458999999999999
No 46
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=97.99 E-value=0.0013 Score=64.95 Aligned_cols=72 Identities=10% Similarity=0.033 Sum_probs=54.7
Q ss_pred ceeEEeccCHH---HHhccCCccceee---ccCc-hhHHHHH-------HhCCceeccccccchhHHHHHHHHhhcccee
Q 011531 354 NRFIVSWAPQE---EVLAHPAVGGFLT---HGGW-NSTLEGI-------AAGVPMICWPQFSDQLVNSRCVSEVWKIGFD 419 (483)
Q Consensus 354 nv~~~~~~p~~---~ll~~~~~~~~It---HgG~-gs~~eal-------~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~ 419 (483)
||.+.+++|+. .+++.+++ +|. +-|. .++.||+ ++|+|+|+... +.+ -..|..
T Consensus 266 ~V~f~G~~~~~~l~~~~~~adv--~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~-~~~G~l 332 (406)
T 2hy7_A 266 NVIVYGEMKHAQTIGYIKHARF--GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVG-PYKSRF 332 (406)
T ss_dssp TEEEECCCCHHHHHHHHHTCSE--EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTC-SCSSEE
T ss_pred CEEEcCCCCHHHHHHHHHhcCE--EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------ccc-CcceEE
Confidence 49999999964 46877887 553 3344 5789999 99999999865 433 355776
Q ss_pred -cCCCCCHHHHHHHHHHHHhH
Q 011531 420 -MKDTCDGSIIEKLVRDLMEN 439 (483)
Q Consensus 420 -l~~~~~~~~l~~~i~~ll~~ 439 (483)
+ ..-+.++++++|.+++++
T Consensus 333 ~v-~~~d~~~la~ai~~ll~~ 352 (406)
T 2hy7_A 333 GY-TPGNADSVIAAITQALEA 352 (406)
T ss_dssp EE-CTTCHHHHHHHHHHHHHC
T ss_pred Ee-CCCCHHHHHHHHHHHHhC
Confidence 6 345889999999999996
No 47
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=97.92 E-value=0.0029 Score=61.56 Aligned_cols=95 Identities=14% Similarity=0.145 Sum_probs=66.7
Q ss_pred eeEEeccC-HHHHhccCCccceee---c--cCchhHHHHHHhCCceeccccccchhHHHHHHHHhhccceecCCCCCHHH
Q 011531 355 RFIVSWAP-QEEVLAHPAVGGFLT---H--GGWNSTLEGIAAGVPMICWPQFSDQLVNSRCVSEVWKIGFDMKDTCDGSI 428 (483)
Q Consensus 355 v~~~~~~p-~~~ll~~~~~~~~It---H--gG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~ 428 (483)
+++.++.. -..+++.+++ ++. . +|..++.||+++|+|+|+-|..++.+.....+.+ .|.++.. -+.++
T Consensus 262 v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~-~G~l~~~---~d~~~ 335 (374)
T 2xci_A 262 VILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEK-EGAGFEV---KNETE 335 (374)
T ss_dssp EEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHH-TTCEEEC---CSHHH
T ss_pred EEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHH-CCCEEEe---CCHHH
Confidence 66666554 4668877776 543 1 2347899999999999988877777776666534 5777766 37899
Q ss_pred HHHHHHHHHhH-hHHHHHHHHHHHHHHH
Q 011531 429 IEKLVRDLMEN-KREEIMGSTDRVATMA 455 (483)
Q Consensus 429 l~~~i~~ll~~-~~~~~~~~a~~l~~~~ 455 (483)
|+++|.++++| ....+.+++++..+.-
T Consensus 336 La~ai~~ll~d~~r~~mg~~ar~~~~~~ 363 (374)
T 2xci_A 336 LVTKLTELLSVKKEIKVEEKSREIKGCY 363 (374)
T ss_dssp HHHHHHHHHHSCCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHhc
Confidence 99999999984 1134666666655443
No 48
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.46 E-value=0.0035 Score=66.44 Aligned_cols=142 Identities=15% Similarity=0.138 Sum_probs=92.4
Q ss_pred CCCeEEEEecCcccCCCHHHHHHHHHHHHhCCCeEEEEEcCCccCCCCCCCCCChhhhhh--cCCCceeEEeccCHHHHh
Q 011531 290 PPKSVLYVSFGSLVGLTREQMSELWHGLVNRGQRFLLVVRPDLILGEPGAAETPLAQNEG--TEERNRFIVSWAPQEEVL 367 (483)
Q Consensus 290 ~~~~vi~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~~nv~~~~~~p~~~ll 367 (483)
++..|||.||.+..+.+++.+..-.+-|+..+--++|.+..+... . ..+...+... .+++ +.+.+..|..+-|
T Consensus 520 p~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~---~-~~l~~~~~~~gi~~~r-~~f~~~~~~~~~l 594 (723)
T 4gyw_A 520 PEDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVG---E-PNIQQYAQNMGLPQNR-IIFSPVAPKEEHV 594 (723)
T ss_dssp CTTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGGG---H-HHHHHHHHHTTCCGGG-EEEEECCCHHHHH
T ss_pred CCCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHHH---H-HHHHHHHHhcCCCcCe-EEECCCCCHHHHH
Confidence 456799999999999999999998888988888888888543111 0 0011111110 1245 8889999865433
Q ss_pred c-cCCccceee---ccCchhHHHHHHhCCceeccccccchhHHH-HHHHHhhccceecCCCCCHHHHHHHHHHHHhH
Q 011531 368 A-HPAVGGFLT---HGGWNSTLEGIAAGVPMICWPQFSDQLVNS-RCVSEVWKIGFDMKDTCDGSIIEKLVRDLMEN 439 (483)
Q Consensus 368 ~-~~~~~~~It---HgG~gs~~eal~~GvP~l~~P~~~DQ~~na-~~v~~~~G~G~~l~~~~~~~~l~~~i~~ll~~ 439 (483)
. +..+++++- .+|..|+.|||..|||+|.++--.=--..+ ..+ ..+|+...+. -+.++-.+.--++-+|
T Consensus 595 ~~~~~~Di~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l-~~~gl~e~ia--~~~~~Y~~~a~~la~d 668 (723)
T 4gyw_A 595 RRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQL-TCLGCLELIA--KNRQEYEDIAVKLGTD 668 (723)
T ss_dssp HHGGGCSEEECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHH-HHHTCGGGBC--SSHHHHHHHHHHHHHC
T ss_pred HHhCCCeEEeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHH-HHcCCccccc--CCHHHHHHHHHHHhcC
Confidence 2 233334765 889999999999999999999543323333 344 4467766653 3555555555555554
No 49
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.45 E-value=0.0029 Score=64.65 Aligned_cols=136 Identities=10% Similarity=-0.034 Sum_probs=90.4
Q ss_pred CeEEEEecCcccCCCHHHHHHHHHHHHhCCCeEEEEEcCCccCCCCCCCCCChhhhh-----hcCCCceeEEeccCHHH-
Q 011531 292 KSVLYVSFGSLVGLTREQMSELWHGLVNRGQRFLLVVRPDLILGEPGAAETPLAQNE-----GTEERNRFIVSWAPQEE- 365 (483)
Q Consensus 292 ~~vi~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~nv~~~~~~p~~~- 365 (483)
..++|.+|+...+..++.+....+.+++.+..++|.... |........... ...++ +.+.+.+|+.+
T Consensus 440 G~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~------g~~~g~~~~~~~~~~~~GI~~R-v~F~g~~p~~e~ 512 (631)
T 3q3e_A 440 EVVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFAL------GQSNGITHPYVERFIKSYLGDS-ATAHPHSPYHQY 512 (631)
T ss_dssp SEEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEE------SSCCGGGHHHHHHHHHHHHGGG-EEEECCCCHHHH
T ss_pred CeEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEec------CCCchhhHHHHHHHHHcCCCcc-EEEcCCCCHHHH
Confidence 468999999999999999988888888887777775311 110011111111 23355 88899998655
Q ss_pred --HhccCCccceee---ccCchhHHHHHHhCCceeccccccchhHHH-HHHHHhhcccee-cCCCCCHHHHHHHHHHHHh
Q 011531 366 --VLAHPAVGGFLT---HGGWNSTLEGIAAGVPMICWPQFSDQLVNS-RCVSEVWKIGFD-MKDTCDGSIIEKLVRDLME 438 (483)
Q Consensus 366 --ll~~~~~~~~It---HgG~gs~~eal~~GvP~l~~P~~~DQ~~na-~~v~~~~G~G~~-l~~~~~~~~l~~~i~~ll~ 438 (483)
.+...++ |+. .+|..|+.||+++|||+|.++-..=.-..+ ..+ ...|+... +. -+.++..+...++.+
T Consensus 513 la~y~~aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL-~~~GLpE~LIA--~d~eeYv~~Av~La~ 587 (631)
T 3q3e_A 513 LRILHNCDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLF-KRLGLPEWLIA--NTVDEYVERAVRLAE 587 (631)
T ss_dssp HHHHHTCSE--EECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHH-HHTTCCGGGEE--SSHHHHHHHHHHHHH
T ss_pred HHHHhcCcE--EEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHH-HhcCCCcceec--CCHHHHHHHHHHHhC
Confidence 4456665 543 377899999999999999988643222232 233 33566553 32 368888888888888
Q ss_pred H
Q 011531 439 N 439 (483)
Q Consensus 439 ~ 439 (483)
|
T Consensus 588 D 588 (631)
T 3q3e_A 588 N 588 (631)
T ss_dssp C
T ss_pred C
Confidence 6
No 50
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=97.41 E-value=0.00027 Score=67.80 Aligned_cols=111 Identities=18% Similarity=0.218 Sum_probs=78.8
Q ss_pred ceeEEeccCHHHH---hccCCccceeeccCc---------hhHHHHHHhCCceeccccccchhHHHHHHHHhhccceecC
Q 011531 354 NRFIVSWAPQEEV---LAHPAVGGFLTHGGW---------NSTLEGIAAGVPMICWPQFSDQLVNSRCVSEVWKIGFDMK 421 (483)
Q Consensus 354 nv~~~~~~p~~~l---l~~~~~~~~ItHgG~---------gs~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~ 421 (483)
||.+.+|+|+.++ |+.++.+++.+-+.. +-+.|++++|+|+|+.+ ...++..+.+ .|+|..++
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v~~-~~~G~~~~ 289 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELIEN-NGLGWIVK 289 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHHHH-HTCEEEES
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHHHh-CCeEEEeC
Confidence 4999999998775 434455444423322 34789999999999754 4567777855 79999985
Q ss_pred CCCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 011531 422 DTCDGSIIEKLVRDLMENKREEIMGSTDRVATMARDAVNEGGSSYRNLDGLIEDI 476 (483)
Q Consensus 422 ~~~~~~~l~~~i~~ll~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~l~~~l 476 (483)
+.+++.+++.++..++..++++|+++.++.++. |-...+.+.+.+.+|
T Consensus 290 ---~~~e~~~~i~~l~~~~~~~m~~na~~~a~~~~~----~~f~k~~l~~~~~~~ 337 (339)
T 3rhz_A 290 ---DVEEAIMKVKNVNEDEYIELVKNVRSFNPILRK----GFFTRRLLTESVFQA 337 (339)
T ss_dssp ---SHHHHHHHHHHCCHHHHHHHHHHHHHHTHHHHT----THHHHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhc----cHHHHHHHHHHHHHh
Confidence 478888999888776668899999999988875 444444444444433
No 51
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=96.95 E-value=0.011 Score=49.75 Aligned_cols=125 Identities=14% Similarity=0.128 Sum_probs=71.3
Q ss_pred eEEEEecCcccCCCHHHHHHHHHHHHhCC--CeE-EEEEcCCccCCCCCCCCCChhhhh---hcCCCceeEEeccCHH--
Q 011531 293 SVLYVSFGSLVGLTREQMSELWHGLVNRG--QRF-LLVVRPDLILGEPGAAETPLAQNE---GTEERNRFIVSWAPQE-- 364 (483)
Q Consensus 293 ~vi~vs~Gs~~~~~~~~~~~~~~a~~~~~--~~~-i~~~~~~~~~~~~~~~~~~~~~~~---~~~~~nv~~~~~~p~~-- 364 (483)
+++++..|.... ...+..+++++..+. .++ ++.+ |.. .....+.+ +...+ +.+ +|+|+.
T Consensus 2 ~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l~i~--------G~g-~~~~~~~~~~~~~~~~-v~~-g~~~~~~~ 68 (166)
T 3qhp_A 2 PFKIAMVGRYSN--EKNQSVLIKAVALSKYKQDIVLLLK--------GKG-PDEKKIKLLAQKLGVK-AEF-GFVNSNEL 68 (166)
T ss_dssp CEEEEEESCCST--TTTHHHHHHHHHTCTTGGGEEEEEE--------CCS-TTHHHHHHHHHHHTCE-EEC-CCCCHHHH
T ss_pred ceEEEEEeccch--hcCHHHHHHHHHHhccCCCeEEEEE--------eCC-ccHHHHHHHHHHcCCe-EEE-eecCHHHH
Confidence 456777787753 222445666666542 133 3333 211 11122222 12234 888 999864
Q ss_pred -HHhccCCccceee----ccCchhHHHHHHhCC-ceeccccccchhHHHHHHHHhhccceecCCCCCHHHHHHHHHHHHh
Q 011531 365 -EVLAHPAVGGFLT----HGGWNSTLEGIAAGV-PMICWPQFSDQLVNSRCVSEVWKIGFDMKDTCDGSIIEKLVRDLME 438 (483)
Q Consensus 365 -~ll~~~~~~~~It----HgG~gs~~eal~~Gv-P~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~~i~~ll~ 438 (483)
.++..+++ +|. -|.-.++.||+++|+ |+|+....+.-. ..+ +..+. .+ ..-+.+++.++|.++++
T Consensus 69 ~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~~~---~~~-~~~~~--~~-~~~~~~~l~~~i~~l~~ 139 (166)
T 3qhp_A 69 LEILKTCTL--YVHAANVESEAIACLEAISVGIVPVIANSPLSATR---QFA-LDERS--LF-EPNNAKDLSAKIDWWLE 139 (166)
T ss_dssp HHHHTTCSE--EEECCCSCCCCHHHHHHHHTTCCEEEECCTTCGGG---GGC-SSGGG--EE-CTTCHHHHHHHHHHHHH
T ss_pred HHHHHhCCE--EEECCcccCccHHHHHHHhcCCCcEEeeCCCCchh---hhc-cCCce--EE-cCCCHHHHHHHHHHHHh
Confidence 47877777 664 233459999999996 999944322111 112 21122 22 34589999999999999
Q ss_pred H
Q 011531 439 N 439 (483)
Q Consensus 439 ~ 439 (483)
+
T Consensus 140 ~ 140 (166)
T 3qhp_A 140 N 140 (166)
T ss_dssp C
T ss_pred C
Confidence 6
No 52
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=96.91 E-value=0.013 Score=56.37 Aligned_cols=105 Identities=12% Similarity=0.130 Sum_probs=71.8
Q ss_pred CCCEEEEEcCCCCCCHHHHHHHHHHHHhC--CcEEEEEeCCCchhhhhhccccccccCCCCCeE-EEeCCCCCCCCcccC
Q 011531 6 VNPHVVLLPYPLQGHIKPMMSLAELLGSA--NFQVTFVNTDHNHDLLLRNTDITSFCNRFPNFQ-FRSIPSGLPANVIRS 82 (483)
Q Consensus 6 ~~~~il~~~~~~~GH~~p~l~La~~L~~r--GH~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-f~~~p~~l~~~~~~~ 82 (483)
..+||+++-..+.|++.-..++.+.|+++ +.+|++++.+.+.+-+.. .|.++ ++.++..
T Consensus 7 ~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~----------~p~vd~vi~~~~~-------- 68 (349)
T 3tov_A 7 DYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEY----------NPNIDELIVVDKK-------- 68 (349)
T ss_dssp TTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSS----------CTTCSEEEEECCS--------
T ss_pred CCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhc----------CCCccEEEEeCcc--------
Confidence 35899999999999999999999999998 999999999665443322 23454 5555521
Q ss_pred CCCHHHHHHHHHHhchHHHHHHHHHhhhhhcCCCCc-cEEEEcCCCCcchHHHHHHcCCCeEE
Q 011531 83 GLTAKDVFDAMKAVSKPAFRDLLISLREETEQRQSP-TCVIADGILCFLTLDVSEELQIPLLA 144 (483)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~-D~VI~D~~~~~~~~~~A~~lgIP~v~ 144 (483)
. .... + ..+..++..+++ .++ |+||.=....- ...++...|+|..+
T Consensus 69 -~-~~~~---~-----~~~~~l~~~Lr~-----~~y~D~vidl~~~~r-s~~l~~~~~a~~ri 115 (349)
T 3tov_A 69 -G-RHNS---I-----SGLNEVAREINA-----KGKTDIVINLHPNER-TSYLAWKIHAPITT 115 (349)
T ss_dssp -S-HHHH---H-----HHHHHHHHHHHH-----HCCCCEEEECCCSHH-HHHHHHHHCCSEEE
T ss_pred -c-cccc---H-----HHHHHHHHHHhh-----CCCCeEEEECCCChH-HHHHHHHhCCCeEE
Confidence 0 0000 1 112344555553 579 99997655555 67788889999655
No 53
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=96.89 E-value=0.13 Score=49.02 Aligned_cols=103 Identities=19% Similarity=0.121 Sum_probs=67.4
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhC--CcEEEEEeCCCchhhhhhccccccccCCCCCe-EEEeCCCCCCCCcccCCC
Q 011531 8 PHVVLLPYPLQGHIKPMMSLAELLGSA--NFQVTFVNTDHNHDLLLRNTDITSFCNRFPNF-QFRSIPSGLPANVIRSGL 84 (483)
Q Consensus 8 ~~il~~~~~~~GH~~p~l~La~~L~~r--GH~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~f~~~p~~l~~~~~~~~~ 84 (483)
|||+++...+.|++.-...+.+.|+++ |.+|++++.+.+.+.+.. .+.+ +++.++.. .. ..
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~----------~p~i~~v~~~~~~--~~----~~ 64 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSR----------MPEVNEAIPMPLG--HG----AL 64 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTT----------CTTEEEEEEC-------------
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhc----------CCccCEEEEecCC--cc----cc
Confidence 689999999999999999999999987 999999999655443322 2234 45555411 00 00
Q ss_pred CHHHHHHHHHHhchHHHHHHHHHhhhhhcCCCCccEEEEcCCCCcchHHHHHHcCCCeEE
Q 011531 85 TAKDVFDAMKAVSKPAFRDLLISLREETEQRQSPTCVIADGILCFLTLDVSEELQIPLLA 144 (483)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~D~VI~D~~~~~~~~~~A~~lgIP~v~ 144 (483)
....+.++.+.+++ .+||+||.-....- ...++...|+|...
T Consensus 65 ------------~~~~~~~l~~~l~~-----~~~D~vid~~~~~~-sa~~~~~~~~~~~i 106 (348)
T 1psw_A 65 ------------EIGERRKLGHSLRE-----KRYDRAYVLPNSFK-SALVPLFAGIPHRT 106 (348)
T ss_dssp ------------CHHHHHHHHHHTTT-----TTCSEEEECSCCSG-GGHHHHHTTCSEEE
T ss_pred ------------chHHHHHHHHHHHh-----cCCCEEEECCCChH-HHHHHHHhCCCEEe
Confidence 01223455666654 68999994333344 66778888999744
No 54
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=96.88 E-value=0.013 Score=50.87 Aligned_cols=77 Identities=12% Similarity=0.053 Sum_probs=56.6
Q ss_pred ceeE-EeccCH---HHHhccCCccceeecc---C-chhHHHHHHhCCceeccccccchhHHHHHHHHhhccceecCCCCC
Q 011531 354 NRFI-VSWAPQ---EEVLAHPAVGGFLTHG---G-WNSTLEGIAAGVPMICWPQFSDQLVNSRCVSEVWKIGFDMKDTCD 425 (483)
Q Consensus 354 nv~~-~~~~p~---~~ll~~~~~~~~ItHg---G-~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~ 425 (483)
||.+ .+++++ ..++..+++ +|.-. | -.++.||+++|+|+|+.... .....+ + .+.|..+ ..-+
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~~----~~~e~~-~-~~~g~~~-~~~~ 166 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAVG----GLRDII-T-NETGILV-KAGD 166 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESCH----HHHHHC-C-TTTCEEE-CTTC
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCCC----ChHHHc-C-CCceEEe-cCCC
Confidence 3999 999985 457877777 66432 3 46899999999999987543 334344 3 4667776 3458
Q ss_pred HHHHHHHHHHHHh-H
Q 011531 426 GSIIEKLVRDLME-N 439 (483)
Q Consensus 426 ~~~l~~~i~~ll~-~ 439 (483)
.+.+.++|.++++ +
T Consensus 167 ~~~l~~~i~~l~~~~ 181 (200)
T 2bfw_A 167 PGELANAILKALELS 181 (200)
T ss_dssp HHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHhcC
Confidence 9999999999998 7
No 55
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=92.65 E-value=0.28 Score=48.14 Aligned_cols=83 Identities=11% Similarity=0.033 Sum_probs=55.5
Q ss_pred ceeEEeccCHH---HHhccCCccceee--c-cCc-hhHHHHHHhCCceeccccccchhHHHHHHHHhhccceecCCCCCH
Q 011531 354 NRFIVSWAPQE---EVLAHPAVGGFLT--H-GGW-NSTLEGIAAGVPMICWPQFSDQLVNSRCVSEVWKIGFDMKDTCDG 426 (483)
Q Consensus 354 nv~~~~~~p~~---~ll~~~~~~~~It--H-gG~-gs~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~ 426 (483)
||.+.+++|+. .+++.+++ ||. . =|. .++.||+++|+|+|+ -..+ ....+ +.-..|..+ ..-+.
T Consensus 296 ~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v-~~~~~G~lv-~~~d~ 366 (413)
T 2x0d_A 296 HLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLS-NWHSNIVSL-EQLNP 366 (413)
T ss_dssp EEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGG-GTBTTEEEE-SSCSH
T ss_pred cEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhh-hcCCCEEEe-CCCCH
Confidence 49999999864 47777777 664 2 133 468999999999998 3222 11234 322467766 44689
Q ss_pred HHHHHHHHHHHhHhHHHHHHH
Q 011531 427 SIIEKLVRDLMENKREEIMGS 447 (483)
Q Consensus 427 ~~l~~~i~~ll~~~~~~~~~~ 447 (483)
++++++|.++++| +..+++
T Consensus 367 ~~la~ai~~ll~~--~~~~~~ 385 (413)
T 2x0d_A 367 ENIAETLVELCMS--FNNRDV 385 (413)
T ss_dssp HHHHHHHHHHHHH--TC----
T ss_pred HHHHHHHHHHHcC--HHHHHH
Confidence 9999999999997 555554
No 56
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=88.66 E-value=0.77 Score=46.62 Aligned_cols=81 Identities=19% Similarity=0.160 Sum_probs=52.5
Q ss_pred cCCCceeEEeccCHH---HHhccCCccceeec---cCc-hhHHHHHHhCCceeccccccchhHHHHHHHHhhccceecC-
Q 011531 350 TEERNRFIVSWAPQE---EVLAHPAVGGFLTH---GGW-NSTLEGIAAGVPMICWPQFSDQLVNSRCVSEVWKIGFDMK- 421 (483)
Q Consensus 350 ~~~~nv~~~~~~p~~---~ll~~~~~~~~ItH---gG~-gs~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~- 421 (483)
.+.+ +.+....+.. .+++.+++ ||.= =|. .+++||+++|+|+|+.... -....|.+ -.-|....
T Consensus 380 ~~~~-v~~~~~~~~~~~~~~~~~aD~--~v~PS~~E~fgl~~lEAma~G~PvI~s~~g----G~~e~V~d-g~~G~~~~~ 451 (536)
T 3vue_A 380 YPGK-VRAVVKFNAPLAHLIMAGADV--LAVPSRFEPCGLIQLQGMRYGTPCACASTG----GLVDTVIE-GKTGFHMGR 451 (536)
T ss_dssp STTT-EEEECSCCHHHHHHHHHHCSE--EEECCSCCSSCSHHHHHHHTTCCEEECSCT----HHHHHCCB-TTTEEECCC
T ss_pred cCCc-eEEEEeccHHHHHHHHHhhhe--eecccccCCCCHHHHHHHHcCCCEEEcCCC----CchheeeC-CCCcccccc
Confidence 4455 8888777753 47777777 6642 233 3899999999999997653 23333422 22333221
Q ss_pred --------CCCCHHHHHHHHHHHHh
Q 011531 422 --------DTCDGSIIEKLVRDLME 438 (483)
Q Consensus 422 --------~~~~~~~l~~~i~~ll~ 438 (483)
+..+.+.|+++|.+++.
T Consensus 452 ~~~~g~l~~~~d~~~la~ai~ral~ 476 (536)
T 3vue_A 452 LSVDCKVVEPSDVKKVAATLKRAIK 476 (536)
T ss_dssp CCSCTTCCCHHHHHHHHHHHHHHHH
T ss_pred CCCceeEECCCCHHHHHHHHHHHHH
Confidence 23467899999999886
No 57
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=87.96 E-value=2.9 Score=37.44 Aligned_cols=113 Identities=19% Similarity=0.134 Sum_probs=64.0
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCCCchhhhhhccccccccCCCCCeEEEeCCCCCCCCcccCCCCHH
Q 011531 8 PHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTDHNHDLLLRNTDITSFCNRFPNFQFRSIPSGLPANVIRSGLTAK 87 (483)
Q Consensus 8 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~~~p~~l~~~~~~~~~~~~ 87 (483)
|||++..=-+. |---+..|++.|.+.| +|+++.+.....-...+ +....-+++..+..... ....+...
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~s------it~~~pl~~~~~~~~~~---~~v~GTPa 70 (251)
T 2phj_A 2 PTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHS------LTFTEPLKMRKIDTDFY---TVIDGTPA 70 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCS------CCCSSCEEEEEEETTEE---EETTCCHH
T ss_pred CEEEEECCCCC-CCHHHHHHHHHHHhcC-CEEEEecCCCccCCccc------eecCCCeEEEEecCCCe---EEECCCHH
Confidence 68887776554 4455888999999998 99999997654433222 12222355555443211 11233333
Q ss_pred HHHHHHHHhchHHHHHHHHHhhhhhcCCCCccEEEEc----------CCCC---cchHHHHHHcCCCeEEEec
Q 011531 88 DVFDAMKAVSKPAFRDLLISLREETEQRQSPTCVIAD----------GILC---FLTLDVSEELQIPLLALRT 147 (483)
Q Consensus 88 ~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~D~VI~D----------~~~~---~~~~~~A~~lgIP~v~~~~ 147 (483)
.....-. ..++.. .+||+||+- .+.+ . |+.-|..+|||.|.+|.
T Consensus 71 DCV~lal-------~~l~~~--------~~PDLVvSGIN~G~Nlg~dv~ySGTVg-AA~Ea~~~GiPaIA~S~ 127 (251)
T 2phj_A 71 DCVHLGY-------RVILEE--------KKPDLVLSGINEGPNLGEDITYSGTVS-GAMEGRILGIPSIAFSA 127 (251)
T ss_dssp HHHHHHH-------HTTTTT--------CCCSEEEEEEESSCCCGGGGGGCHHHH-HHHHHHHTTCCEEEEEE
T ss_pred HHHHHHH-------HHhcCC--------CCCCEEEECCcCCCcCCCCCccchHHH-HHHHHHHcCCCeEEEEc
Confidence 2222111 122211 479999974 2222 3 44556678999999865
No 58
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=87.33 E-value=3.6 Score=40.99 Aligned_cols=109 Identities=10% Similarity=0.072 Sum_probs=68.3
Q ss_pred ee-EEeccCHHH---HhccCCccceee---ccCch-hHHHHHHhCC-----ceeccccccchhHHHHHHHHhhccceecC
Q 011531 355 RF-IVSWAPQEE---VLAHPAVGGFLT---HGGWN-STLEGIAAGV-----PMICWPQFSDQLVNSRCVSEVWKIGFDMK 421 (483)
Q Consensus 355 v~-~~~~~p~~~---ll~~~~~~~~It---HgG~g-s~~eal~~Gv-----P~l~~P~~~DQ~~na~~v~~~~G~G~~l~ 421 (483)
+. +.+++++.+ ++..+++ ||. .=|+| ++.||+++|+ |+|+..+.+--.. + .-|+.+
T Consensus 333 v~~~~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~----l----~~g~lv- 401 (482)
T 1uqt_A 333 LYYLNQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANE----L----TSALIV- 401 (482)
T ss_dssp EEEECSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGT----C----TTSEEE-
T ss_pred EEEeCCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCCHHH----h----CCeEEE-
Confidence 44 357888654 6767777 654 33664 8999999998 6666554332111 1 234555
Q ss_pred CCCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHh
Q 011531 422 DTCDGSIIEKLVRDLMENKREEIMGSTDRVATMARDAVNEGGSSYRNLDGLIEDIRLM 479 (483)
Q Consensus 422 ~~~~~~~l~~~i~~ll~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~l~~~l~~~ 479 (483)
...+.+.++++|.++|++..+.-++..+++++.+++ - +....++.+++.|+..
T Consensus 402 ~p~d~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~~----~-s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 402 NPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVK----N-DINHWQECFISDLKQI 454 (482)
T ss_dssp CTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHH----T-CHHHHHHHHHHHHHHS
T ss_pred CCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh----C-CHHHHHHHHHHHHHhc
Confidence 446889999999999983213334444445554443 2 5566788888888654
No 59
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=85.81 E-value=6.5 Score=35.02 Aligned_cols=113 Identities=12% Similarity=-0.039 Sum_probs=63.1
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCCCchhhhhhccccccccCCCCCeEEEeCCCCCC--C-CcccCCC
Q 011531 8 PHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTDHNHDLLLRNTDITSFCNRFPNFQFRSIPSGLP--A-NVIRSGL 84 (483)
Q Consensus 8 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~~~p~~l~--~-~~~~~~~ 84 (483)
|||++..=-+. |---+..|++.|++.| +|+++.+.....-.. +.+....-+++..++...+ . ......+
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g------~siTl~~pl~~~~~~~~~~~~~~~~~~v~G 72 (244)
T 2e6c_A 1 MRILVTNDDGI-YSPGLWALAEAASQFG-EVFVAAPDTEQSAAG------HAITIAHPVRAYPHPSPLHAPHFPAYRVRG 72 (244)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEECSSCCCCC------SSCCCSSCBEEEECCCCTTSCCCCEEEEES
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCc------ccccCCCCeEEEEeccCcCCCCCceEEEcC
Confidence 56666655443 3344788999999988 899999976543322 2223333467766653210 0 1111223
Q ss_pred CHHHHHHHHHHhchHHHHHHHHHhhhhhcCCCCccEEEEc----------CCC---CcchHHHHHHcCCCeEEEec
Q 011531 85 TAKDVFDAMKAVSKPAFRDLLISLREETEQRQSPTCVIAD----------GIL---CFLTLDVSEELQIPLLALRT 147 (483)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~D~VI~D----------~~~---~~~~~~~A~~lgIP~v~~~~ 147 (483)
........-. . +. .+||+||+- .+. .. |+.=|..+|||.|.++.
T Consensus 73 TPaDCV~lal-------~-----l~------~~PDLVvSGIN~G~Nlg~dv~ySGTVg-AA~Ea~~~GiPaIA~S~ 129 (244)
T 2e6c_A 73 TPADCVALGL-------H-----LF------GPVDLVLSGVNLGSNLGHEIWHSGTVA-AAKQGYLFGLSAAAFSV 129 (244)
T ss_dssp CHHHHHHHHH-------H-----HS------CSCCEEEEEEEESCCCGGGGGGCHHHH-HHHHHHHTTCEEEEEEE
T ss_pred cHHHHHHHHH-------c-----CC------CCCCEEEECCccCCCCCcCeechHhHH-HHHHHHhcCCCeEEEec
Confidence 3332222111 1 22 579999973 222 23 45556668999999865
No 60
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=85.47 E-value=6 Score=39.40 Aligned_cols=110 Identities=10% Similarity=0.026 Sum_probs=72.0
Q ss_pred eeEEeccCHH---HHhccCCccceee---ccCch-hHHHHHHhC---CceeccccccchhHHHHHHHHhhccceecCCCC
Q 011531 355 RFIVSWAPQE---EVLAHPAVGGFLT---HGGWN-STLEGIAAG---VPMICWPQFSDQLVNSRCVSEVWKIGFDMKDTC 424 (483)
Q Consensus 355 v~~~~~~p~~---~ll~~~~~~~~It---HgG~g-s~~eal~~G---vP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~ 424 (483)
|.+...+|+. .++..+++ |+. +=|+| +..|++++| .|+|+--+.+- +..+ . .-|+.+ +..
T Consensus 354 V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aGa----~~~l-~--~~allV-nP~ 423 (496)
T 3t5t_A 354 VRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILSETCGA----AEVL-G--EYCRSV-NPF 423 (496)
T ss_dssp EEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBTT----HHHH-G--GGSEEE-CTT
T ss_pred EEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEeCCCCC----HHHh-C--CCEEEE-CCC
Confidence 7778888864 46667777 443 45887 568999996 66666544431 1112 1 135666 456
Q ss_pred CHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHh
Q 011531 425 DGSIIEKLVRDLMENKREEIMGSTDRVATMARDAVNEGGSSYRNLDGLIEDIRLM 479 (483)
Q Consensus 425 ~~~~l~~~i~~ll~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~l~~~l~~~ 479 (483)
+.+.++++|.++|+...++-+++.+++.+.+++ -....-++.++++|...
T Consensus 424 D~~~lA~AI~~aL~m~~~er~~r~~~~~~~V~~-----~d~~~W~~~fl~~L~~~ 473 (496)
T 3t5t_A 424 DLVEQAEAISAALAAGPRQRAEAAARRRDAARP-----WTLEAWVQAQLDGLAAD 473 (496)
T ss_dssp BHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTT-----CBHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH-----CCHHHHHHHHHHHHhhc
Confidence 899999999999984224445555555555543 24566788888888764
No 61
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=85.13 E-value=3.5 Score=42.67 Aligned_cols=78 Identities=14% Similarity=0.111 Sum_probs=46.9
Q ss_pred eeEE---eccCH---------HHHhccCCccceeec---cCc-hhHHHHHHhCCceeccccccchhHHHHHHHHh-----
Q 011531 355 RFIV---SWAPQ---------EEVLAHPAVGGFLTH---GGW-NSTLEGIAAGVPMICWPQFSDQLVNSRCVSEV----- 413 (483)
Q Consensus 355 v~~~---~~~p~---------~~ll~~~~~~~~ItH---gG~-gs~~eal~~GvP~l~~P~~~DQ~~na~~v~~~----- 413 (483)
|.++ .|++. ..+++.+++ ||.- =|+ .+++||+++|+|+|+.-..+ ....|.+.
T Consensus 492 VKVIf~P~~L~~~d~lf~~d~~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~gG----~~d~V~dg~~~~~ 565 (725)
T 3nb0_A 492 VKMIFHPEFLNANNPILGLDYDEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNVSG----FGSYMEDLIETNQ 565 (725)
T ss_dssp EEEEECCSCCCTTCSSSCCCHHHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETTBH----HHHHHHTTSCHHH
T ss_pred eeEEEeccccCCCCccchhHHHHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCCCC----hhhhhhccccccC
Confidence 5554 77765 457878887 6643 344 48999999999999976643 11122110
Q ss_pred -hccceecC--CCCCHHHHHHHHHHHHh
Q 011531 414 -WKIGFDMK--DTCDGSIIEKLVRDLME 438 (483)
Q Consensus 414 -~G~G~~l~--~~~~~~~l~~~i~~ll~ 438 (483)
-+.|+.+. ...+.+++.++|.++|.
T Consensus 566 ~~~tG~lV~~rd~~d~ee~aeaLa~aL~ 593 (725)
T 3nb0_A 566 AKDYGIYIVDRRFKAPDESVEQLVDYME 593 (725)
T ss_dssp HHHTTEEEECCSSSCHHHHHHHHHHHHH
T ss_pred CCCceEEEeCCCCCCHHHHHHHHHHHHH
Confidence 14566553 34566666656555553
No 62
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=84.99 E-value=6.1 Score=35.98 Aligned_cols=114 Identities=13% Similarity=-0.002 Sum_probs=62.0
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCCCchhhhhhccccccccCCCCCeEEEeCCCCCCCCcccCCCCHH
Q 011531 8 PHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTDHNHDLLLRNTDITSFCNRFPNFQFRSIPSGLPANVIRSGLTAK 87 (483)
Q Consensus 8 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~~~p~~l~~~~~~~~~~~~ 87 (483)
|||++..=-+. +---+..|++.|++.| +|+++.+.....-...+ +....-+++..++.. ........+...
T Consensus 1 M~ILlTNDDGi-~ApGi~aL~~aL~~~g-~V~VVAP~~~qSg~g~s------iTl~~pl~~~~~~~~-~~~~~~v~GTPa 71 (280)
T 1l5x_A 1 MKILVTNDDGV-HSPGLRLLYQFALSLG-DVDVVAPESPKSATGLG------ITLHKPLRMYEVDLC-GFRAIATSGTPS 71 (280)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHGGGS-EEEEEEESSCTTTSCSS------CCCSSCBCEEEEECS-SSEEEEESSCHH
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCccc------ccCCCCeEEEEeccC-CCceEEECCcHH
Confidence 56666655443 3344788999999988 89999997664433222 122223455444321 001111233333
Q ss_pred HHHHHHHHhchHHHHHHHHHhhhhhcCCCCccEEEEc-----------CCCC---cchHHHHHHcCCCeEEEecc
Q 011531 88 DVFDAMKAVSKPAFRDLLISLREETEQRQSPTCVIAD-----------GILC---FLTLDVSEELQIPLLALRTH 148 (483)
Q Consensus 88 ~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~D~VI~D-----------~~~~---~~~~~~A~~lgIP~v~~~~~ 148 (483)
.....- +..+ . .+||+||+- .+.+ . |+.=|..+|||.|.++..
T Consensus 72 DCV~la-------l~~l-----~-----~~PDLVvSGIN~G~Nlg~d~v~ySGTVg-AA~Ea~~~GiPaIA~S~~ 128 (280)
T 1l5x_A 72 DTVYLA-------TFGL-----G-----RKYDIVLSGINLGDNTSLQVILSSGTLG-AAFQAALLGIPALAYSAY 128 (280)
T ss_dssp HHHHHH-------HHHH-----T-----SCCSEEEEEEEEBCCCSHHHHTTCHHHH-HHHHHHHTTCCEEEEEEC
T ss_pred HHHHHH-------HhcC-----C-----CCCCEEEECCccCCcCCccccccchhHH-HHHHHHHcCCCeEEEEcc
Confidence 222211 1222 1 579999973 2222 3 444556689999999763
No 63
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=84.38 E-value=10 Score=32.21 Aligned_cols=39 Identities=18% Similarity=0.326 Sum_probs=31.2
Q ss_pred CEEEEEc--CCCCCCHHHHHHHHHHHHhCCcEEEEEeCCCc
Q 011531 8 PHVVLLP--YPLQGHIKPMMSLAELLGSANFQVTFVNTDHN 46 (483)
Q Consensus 8 ~~il~~~--~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~~ 46 (483)
||++.+. -|+-|-..-...||..|+++|++|.++-.+..
T Consensus 1 M~vi~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D~~ 41 (206)
T 4dzz_A 1 MKVISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTDPQ 41 (206)
T ss_dssp CEEEEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred CeEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECCCC
Confidence 3554444 36789999999999999999999999987643
No 64
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=83.99 E-value=2.1 Score=40.16 Aligned_cols=44 Identities=14% Similarity=0.052 Sum_probs=34.6
Q ss_pred CEEEEEcC-CCCCCHHHHHHHHHHHHhCCcEEEEEeCCCchhhhhh
Q 011531 8 PHVVLLPY-PLQGHIKPMMSLAELLGSANFQVTFVNTDHNHDLLLR 52 (483)
Q Consensus 8 ~~il~~~~-~~~GH~~p~l~La~~L~~rGH~V~~~~~~~~~~~~~~ 52 (483)
.+|+|++. |+-|-..-...||..|+++|++|.++..+. ...+..
T Consensus 14 ~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~-~~~l~~ 58 (324)
T 3zq6_A 14 TTFVFIGGKGGVGKTTISAATALWMARSGKKTLVISTDP-AHSLSD 58 (324)
T ss_dssp CEEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEECCS-SCCHHH
T ss_pred eEEEEEeCCCCchHHHHHHHHHHHHHHCCCcEEEEeCCC-CcCHHH
Confidence 45555544 788999999999999999999999999876 333333
No 65
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=83.76 E-value=8 Score=34.50 Aligned_cols=115 Identities=12% Similarity=0.086 Sum_probs=62.0
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCCCchhhhhhccccccccCCCCCeEEEeCCCCCCCCcccCCCCHH
Q 011531 8 PHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTDHNHDLLLRNTDITSFCNRFPNFQFRSIPSGLPANVIRSGLTAK 87 (483)
Q Consensus 8 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~~~p~~l~~~~~~~~~~~~ 87 (483)
|||++..=-+. |---+..|++.|++.| +|+++.+.....-...+ +....-+++..++..-........+...
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~s------iTl~~pl~~~~~~~~~~~~~~~v~GTPa 72 (247)
T 1j9j_A 1 MRILVTNDDGI-QSKGIIVLAELLSEEH-EVFVVAPDKERSATGHS------ITIHVPLWMKKVFISERVVAYSTTGTPA 72 (247)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTCTTC------CCCSSCCCEEECCCSSSEEEEEESSCHH
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCccc------ccCCCCeEEEEeccCCCCceEEECCcHH
Confidence 56666655443 3344788999999988 89999997664433222 2222235555554310001111223333
Q ss_pred HHHHHHHHhchHHHHHHHHHhhhhhcCCCCccEEEEc----------CCCC---cchHHHHHHcCCCeEEEec
Q 011531 88 DVFDAMKAVSKPAFRDLLISLREETEQRQSPTCVIAD----------GILC---FLTLDVSEELQIPLLALRT 147 (483)
Q Consensus 88 ~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~D~VI~D----------~~~~---~~~~~~A~~lgIP~v~~~~ 147 (483)
.....-. ..++ . .+||+||+- .+.+ . |+.=|..+|||.|.++.
T Consensus 73 DCV~lal-------~~l~---~------~~PDLVvSGIN~G~Nlg~dv~ySGTVg-AA~Ea~~~GiPaIA~S~ 128 (247)
T 1j9j_A 73 DCVKLAY-------NVVM---D------KRVDLIVSGVNRGPNMGMDILHSGTVS-GAMEGAMMNIPSIAISS 128 (247)
T ss_dssp HHHHHHH-------HTTS---T------TCCSEEEEEEEESCCCGGGGGGCHHHH-HHHHHHHTTCCEEEEEE
T ss_pred HHHHHHH-------Hhhc---c------CCCCEEEECCccCCCCCcCeecchhHH-HHHHHHhcCCCeEEEec
Confidence 2222111 1122 1 479999974 2222 3 45556668999999965
No 66
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=83.43 E-value=4.8 Score=36.10 Aligned_cols=112 Identities=20% Similarity=0.129 Sum_probs=58.9
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCCCchhhhhhccccccccCCCCCeEEEeCCCCCCCCcccCCCCHHH
Q 011531 9 HVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTDHNHDLLLRNTDITSFCNRFPNFQFRSIPSGLPANVIRSGLTAKD 88 (483)
Q Consensus 9 ~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~~~p~~l~~~~~~~~~~~~~ 88 (483)
|||+..=-+. +---+..|+++|.+.|| |+++.+.....-... .+....-+++....... .....+....
T Consensus 3 ~ILlTNDDGi-~apGi~~L~~~l~~~g~-V~VvAP~~~~Sg~g~------siT~~~pl~~~~~~~~~---~~~v~GTPaD 71 (251)
T 2wqk_A 3 TFLLVNDDGY-FSPGINALREALKSLGR-VVVVAPDRNLSGVGH------SLTFTEPLKMRKIDTDF---YTVIDGTPAD 71 (251)
T ss_dssp EEEEECSSCT-TCHHHHHHHHHHTTTSE-EEEEEESSCCTTSCC------SCCCSSCEEEEEEETTE---EEETTCCHHH
T ss_pred EEEEEcCCCC-CcHHHHHHHHHHHhCCC-EEEEeeCCCCccccc------CcCCCCCceeEEeeccc---eeecCCChHH
Confidence 4555543332 23347788999999995 999998665433322 22222235554443210 0111233322
Q ss_pred HHHHHHHhchHHHHHHHHHhhhhhcCCCCccEEEE----------cCCCC---cchHHHHHHcCCCeEEEec
Q 011531 89 VFDAMKAVSKPAFRDLLISLREETEQRQSPTCVIA----------DGILC---FLTLDVSEELQIPLLALRT 147 (483)
Q Consensus 89 ~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~D~VI~----------D~~~~---~~~~~~A~~lgIP~v~~~~ 147 (483)
....- +..++.. .+||+||+ |.+.+ + |+.=|..+|||.|.+|.
T Consensus 72 CV~la-------l~~~l~~--------~~PDLVvSGIN~G~N~g~dv~ySGTVg-AA~Ea~~~GipaIA~S~ 127 (251)
T 2wqk_A 72 CVHLG-------YRVILEE--------KKPDLVLSGINEGPNLGEDITYSGTVS-GAMEGRILGIPSIAFSA 127 (251)
T ss_dssp HHHHH-------HHTTTTT--------CCCSEEEEEEESSCCCGGGGGGCHHHH-HHHHHHHTTCCEEEEEE
T ss_pred HHhhh-------hhhhcCC--------CCCCEEEeCccCCCccccceecchHHH-HHHHHHhcCCCeEEEEc
Confidence 22111 1122221 57999998 32222 4 55566778999999874
No 67
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=82.50 E-value=1.1 Score=45.58 Aligned_cols=40 Identities=15% Similarity=0.184 Sum_probs=29.0
Q ss_pred CCCCCEEEEEcCC------CCCCHHHHHHHHHHHHhCCcEEEEEeC
Q 011531 4 SHVNPHVVLLPYP------LQGHIKPMMSLAELLGSANFQVTFVNT 43 (483)
Q Consensus 4 ~~~~~~il~~~~~------~~GH~~p~l~La~~L~~rGH~V~~~~~ 43 (483)
.+.+|||+++++- +.|=-.-.-+|.++|+++||+|+++++
T Consensus 6 ~~~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P 51 (536)
T 3vue_A 6 HHHHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISP 51 (536)
T ss_dssp --CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred CCCCcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEec
Confidence 4567999999742 122223466889999999999999996
No 68
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=82.25 E-value=4.7 Score=38.23 Aligned_cols=48 Identities=15% Similarity=0.068 Sum_probs=37.3
Q ss_pred CCCEEEEEcC-CCCCCHHHHHHHHHHHHhCCcEEEEEeCCCchhhhhhcc
Q 011531 6 VNPHVVLLPY-PLQGHIKPMMSLAELLGSANFQVTFVNTDHNHDLLLRNT 54 (483)
Q Consensus 6 ~~~~il~~~~-~~~GH~~p~l~La~~L~~rGH~V~~~~~~~~~~~~~~~~ 54 (483)
+..+|+|++. |+-|-..-...||..|+++|++|.++..+. ...+....
T Consensus 24 ~~~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~-~~~l~~~l 72 (349)
T 3ug7_A 24 DGTKYIMFGGKGGVGKTTMSAATGVYLAEKGLKVVIVSTDP-AHSLRDIF 72 (349)
T ss_dssp CSCEEEEEECSSSTTHHHHHHHHHHHHHHSSCCEEEEECCT-TCHHHHHH
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEeCCC-CCCHHHHh
Confidence 3455655555 788999999999999999999999999876 44444443
No 69
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=82.23 E-value=0.74 Score=45.03 Aligned_cols=41 Identities=24% Similarity=0.318 Sum_probs=31.9
Q ss_pred CCCCCEEEEEcCCCC-----CCHHHHHHHHHHHHhCCcEEEEEeCC
Q 011531 4 SHVNPHVVLLPYPLQ-----GHIKPMMSLAELLGSANFQVTFVNTD 44 (483)
Q Consensus 4 ~~~~~~il~~~~~~~-----GH~~p~l~La~~L~~rGH~V~~~~~~ 44 (483)
...+|||++++.... |=......++++|+++||+|++++..
T Consensus 43 ~~~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~ 88 (413)
T 2x0d_A 43 SIKGKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTD 88 (413)
T ss_dssp CCCSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESS
T ss_pred CCCCceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEec
Confidence 346799988875421 33356889999999999999999985
No 70
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=79.39 E-value=6.4 Score=36.63 Aligned_cols=131 Identities=14% Similarity=0.053 Sum_probs=74.4
Q ss_pred CCeEEEEecCccc---CCCHHHHHHHHHHHHhCCCeEEEEEcCCccCCCCCCCCCChhhhhhcCCCceeEEeccC---HH
Q 011531 291 PKSVLYVSFGSLV---GLTREQMSELWHGLVNRGQRFLLVVRPDLILGEPGAAETPLAQNEGTEERNRFIVSWAP---QE 364 (483)
Q Consensus 291 ~~~vi~vs~Gs~~---~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p---~~ 364 (483)
++++|.+..|+.. ..+.+.+.++++.+.+.+.++++....+. .......+.+.. .+ +.+++-.. ..
T Consensus 177 ~~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~~------e~~~~~~i~~~~-~~-~~l~g~~sl~el~ 248 (326)
T 2gt1_A 177 AGEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPH------EEERAKRLAEGF-AY-VEVLPKMSLEGVA 248 (326)
T ss_dssp TTSEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSHH------HHHHHHHHHTTC-TT-EEECCCCCHHHHH
T ss_pred CCCEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCHH------HHHHHHHHHhhC-Cc-ccccCCCCHHHHH
Confidence 4567888888754 37778888888888766777665432110 000001111111 22 43433322 36
Q ss_pred HHhccCCccceeeccCchhHHHHHHhCCceecc--ccccchhHHHHHHHHhhcccee-c----C--CCCCHHHHHHHHHH
Q 011531 365 EVLAHPAVGGFLTHGGWNSTLEGIAAGVPMICW--PQFSDQLVNSRCVSEVWKIGFD-M----K--DTCDGSIIEKLVRD 435 (483)
Q Consensus 365 ~ll~~~~~~~~ItHgG~gs~~eal~~GvP~l~~--P~~~DQ~~na~~v~~~~G~G~~-l----~--~~~~~~~l~~~i~~ 435 (483)
.+++++++ +|+.= .|++.=|.+.|+|+|++ |.... .++ -.|-... + . ..++.+++.+++.+
T Consensus 249 ali~~a~l--~I~~D-SG~~HlAaa~g~P~v~lfg~t~p~--~~~-----P~~~~~~~~~~~~~cm~~I~~~~V~~~i~~ 318 (326)
T 2gt1_A 249 RVLAGAKF--VVSVD-TGLSHLTAALDRPNITVYGPTDPG--LIG-----GYGKNQMVCRAPGNELSQLTANAVKQFIEE 318 (326)
T ss_dssp HHHHTCSE--EEEES-SHHHHHHHHTTCCEEEEESSSCHH--HHC-----CCSSSEEEEECGGGCGGGCCHHHHHHHHHH
T ss_pred HHHHhCCE--EEecC-CcHHHHHHHcCCCEEEEECCCChh--hcC-----CCCCCceEecCCcccccCCCHHHHHHHHHH
Confidence 68877777 99882 34455577799999988 32111 110 0111100 1 1 57899999999999
Q ss_pred HHhH
Q 011531 436 LMEN 439 (483)
Q Consensus 436 ll~~ 439 (483)
+|++
T Consensus 319 ~l~~ 322 (326)
T 2gt1_A 319 NAEK 322 (326)
T ss_dssp TTTT
T ss_pred HHHH
Confidence 9874
No 71
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=79.29 E-value=23 Score=30.33 Aligned_cols=100 Identities=12% Similarity=0.094 Sum_probs=61.8
Q ss_pred CCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCCCch-----hhhhhccccccccCCCCCeEEEeCCCCCCCCcc
Q 011531 6 VNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTDHNH-----DLLLRNTDITSFCNRFPNFQFRSIPSGLPANVI 80 (483)
Q Consensus 6 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~~~-----~~~~~~~~~~~~~~~~~~v~f~~~p~~l~~~~~ 80 (483)
++-.|.+++..+.|-..-.+.+|-+.+.+|++|.++..-.-. ..+.+.. .+++.....++...
T Consensus 27 ~~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~Kg~~~~gE~~~l~~L----------~v~~~~~g~gf~~~-- 94 (196)
T 1g5t_A 27 ERGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLEPH----------GVEFQVMATGFTWE-- 94 (196)
T ss_dssp CCCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSCCSSCCHHHHHHGGG----------TCEEEECCTTCCCC--
T ss_pred cCceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeCCCCCccHHHHHHhC----------CcEEEEcccccccC--
Confidence 345788888888999999999999999999999999653321 1122211 37888777644421
Q ss_pred cCCCCHHHHHHHHHHhchHHHHHHHHHhhhhhcCCCCccEEEEcCCCC
Q 011531 81 RSGLTAKDVFDAMKAVSKPAFRDLLISLREETEQRQSPTCVIADGILC 128 (483)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~D~VI~D~~~~ 128 (483)
..+... . .......+....+.+.. .++|+||.|.+.+
T Consensus 95 --~~~~~~---~-~~~a~~~l~~a~~~l~~-----~~yDlvILDEi~~ 131 (196)
T 1g5t_A 95 --TQNREA---D-TAACMAVWQHGKRMLAD-----PLLDMVVLDELTY 131 (196)
T ss_dssp --GGGHHH---H-HHHHHHHHHHHHHHTTC-----TTCSEEEEETHHH
T ss_pred --CCCcHH---H-HHHHHHHHHHHHHHHhc-----CCCCEEEEeCCCc
Confidence 111111 1 11123334444444432 5799999997643
No 72
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=78.94 E-value=2.6 Score=33.92 Aligned_cols=47 Identities=17% Similarity=0.162 Sum_probs=38.7
Q ss_pred CCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCCCchhhhhh
Q 011531 6 VNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTDHNHDLLLR 52 (483)
Q Consensus 6 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~~~~~~~~ 52 (483)
++.|+++.+.++-.|-....-++..|..+|++|++++.....+.+.+
T Consensus 2 ~~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~~p~e~~v~ 48 (137)
T 1ccw_A 2 EKKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVLSPQELFIK 48 (137)
T ss_dssp CCCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEEECHHHHHH
T ss_pred CCCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHH
Confidence 35789999999999999999999999999999998876444444433
No 73
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=78.93 E-value=2.9 Score=40.09 Aligned_cols=36 Identities=17% Similarity=0.104 Sum_probs=30.6
Q ss_pred CEEEEEcC-CCCCCHHHHHHHHHHHHhCCcEEEEEeC
Q 011531 8 PHVVLLPY-PLQGHIKPMMSLAELLGSANFQVTFVNT 43 (483)
Q Consensus 8 ~~il~~~~-~~~GH~~p~l~La~~L~~rGH~V~~~~~ 43 (483)
++|++++. |+-|-..-...+|..|+++|++|.++..
T Consensus 2 ~~i~~~~gkGG~GKTt~a~~la~~la~~g~~vllvd~ 38 (374)
T 3igf_A 2 ALILTFLGKSGVARTKIAIAAAKLLASQGKRVLLAGL 38 (374)
T ss_dssp CEEEEEECSBHHHHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred cEEEEEeCCCCCcHHHHHHHHHHHHHHCCCCeEEEeC
Confidence 45666655 6778999999999999999999999988
No 74
>3io3_A DEHA2D07832P; chaperone, membrane traffic, ATPase; HET: ADP; 1.80A {Debaryomyces hansenii}
Probab=78.32 E-value=1.9 Score=40.97 Aligned_cols=41 Identities=22% Similarity=0.156 Sum_probs=34.7
Q ss_pred CCCCEEEEEcC-CCCCCHHHHHHHHHHHH--hCCcEEEEEeCCC
Q 011531 5 HVNPHVVLLPY-PLQGHIKPMMSLAELLG--SANFQVTFVNTDH 45 (483)
Q Consensus 5 ~~~~~il~~~~-~~~GH~~p~l~La~~L~--~rGH~V~~~~~~~ 45 (483)
++.++|++++. |+-|-..-...+|..|+ ++|++|.++..+.
T Consensus 15 ~~~~~i~~~~gkGGvGKTt~a~~lA~~la~~~~g~~vllid~D~ 58 (348)
T 3io3_A 15 HDSLKWIFVGGKGGVGKTTTSSSVAVQLALAQPNEQFLLISTDP 58 (348)
T ss_dssp CTTCSEEEEECSTTSSHHHHHHHHHHHHHHHCTTSCEEEEECCS
T ss_pred CCCcEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCC
Confidence 34567766665 78899999999999999 9999999999874
No 75
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=78.31 E-value=28 Score=30.71 Aligned_cols=30 Identities=10% Similarity=0.035 Sum_probs=27.1
Q ss_pred CCCCCHHHHHHHHHHHHhCCcEEEEEeCCC
Q 011531 16 PLQGHIKPMMSLAELLGSANFQVTFVNTDH 45 (483)
Q Consensus 16 ~~~GH~~p~l~La~~L~~rGH~V~~~~~~~ 45 (483)
|+-|-..-...||..|+++|++|.++-.+.
T Consensus 12 gGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (260)
T 3q9l_A 12 GGVGKTTSSAAIATGLAQKGKKTVVIDFAI 41 (260)
T ss_dssp TTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCCcHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 677999999999999999999999997654
No 76
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=78.01 E-value=2.4 Score=35.27 Aligned_cols=48 Identities=19% Similarity=0.264 Sum_probs=40.0
Q ss_pred CCCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCCCchhhhhh
Q 011531 5 HVNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTDHNHDLLLR 52 (483)
Q Consensus 5 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~~~~~~~~ 52 (483)
..+.||++.+.++-.|-....-++..|..+|++|+++......+.+.+
T Consensus 16 ~~~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~~p~e~lv~ 63 (161)
T 2yxb_A 16 RRRYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLRQTPEQVAM 63 (161)
T ss_dssp CCSCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSBCCHHHHHH
T ss_pred CCCCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHH
Confidence 357899999999999999999999999999999999876444444433
No 77
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=77.27 E-value=22 Score=29.41 Aligned_cols=143 Identities=18% Similarity=0.135 Sum_probs=77.3
Q ss_pred CeEEEEecCcccCCCHHHHHHHHHHHHhCCCeEEEEEcCCccCCCCCCCCCChhhhhhcCCCceeEEeccCHHHHhccCC
Q 011531 292 KSVLYVSFGSLVGLTREQMSELWHGLVNRGQRFLLVVRPDLILGEPGAAETPLAQNEGTEERNRFIVSWAPQEEVLAHPA 371 (483)
Q Consensus 292 ~~vi~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~ 371 (483)
+|.|-|-+||.. +....+++...++.+|.++=..+ -+...+|+.+.+-... ...-.
T Consensus 11 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V--------~SaHR~p~~l~~~~~~--------------a~~~g 66 (170)
T 1xmp_A 11 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKV--------VSAHRTPDYMFEYAET--------------ARERG 66 (170)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEE--------CCTTTSHHHHHHHHHH--------------TTTTT
T ss_pred CCcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEE--------EeccCCHHHHHHHHHH--------------HHhCC
Confidence 455778888776 66777788888888888754433 1222444543321100 00112
Q ss_pred ccceeeccCchhHHHHHH---hCCceecccccc--chhHHHH--HHHHhhcccee---cC--CCCCHHHHHHHHHHHHhH
Q 011531 372 VGGFLTHGGWNSTLEGIA---AGVPMICWPQFS--DQLVNSR--CVSEVWKIGFD---MK--DTCDGSIIEKLVRDLMEN 439 (483)
Q Consensus 372 ~~~~ItHgG~gs~~eal~---~GvP~l~~P~~~--DQ~~na~--~v~~~~G~G~~---l~--~~~~~~~l~~~i~~ll~~ 439 (483)
++++|.=.|.-.-+-.+. .-+|+|.+|... .....+- .++--.|+.+. ++ +..++.-++..|.. +.+
T Consensus 67 ~~ViIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~daLlSivqmP~GvpVatV~I~~a~~~nAallAaqIla-~~d 145 (170)
T 1xmp_A 67 LKVIIAGAGGAAHLPGMVAAKTNLPVIGVPVQSKALNGLDSLLSIVQMPGGVPVATVAIGKAGSTNAGLLAAQILG-SFH 145 (170)
T ss_dssp CCEEEEEEESSCCHHHHHHTTCCSCEEEEEECCTTTTTHHHHHHHHCCCTTCCCEECCSSHHHHHHHHHHHHHHHH-TTC
T ss_pred CcEEEEECCchhhhHHHHHhccCCCEEEeeCCCCCCCcHHHHHHHhcCCCCCeeEEEecCCcchHHHHHHHHHHHc-cCC
Confidence 334777666543333333 346999999854 2233322 23100244332 32 23444555544432 235
Q ss_pred hHHHHHHHHHHHHHHHHHHHhc
Q 011531 440 KREEIMGSTDRVATMARDAVNE 461 (483)
Q Consensus 440 ~~~~~~~~a~~l~~~~~~~~~~ 461 (483)
+.++++.+.+++.+++.+.+
T Consensus 146 --~~l~~kl~~~r~~~~~~v~~ 165 (170)
T 1xmp_A 146 --DDIHDALELRREAIEKDVRE 165 (170)
T ss_dssp --HHHHHHHHHHHHHHHHHHHC
T ss_pred --HHHHHHHHHHHHHHHHHHHh
Confidence 88999999999988876443
No 78
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=77.23 E-value=10 Score=34.78 Aligned_cols=40 Identities=20% Similarity=0.281 Sum_probs=30.9
Q ss_pred CCEEE-EEc-CCCCCCHHHHHHHHHHHHhCCcEEEEEeCCCc
Q 011531 7 NPHVV-LLP-YPLQGHIKPMMSLAELLGSANFQVTFVNTDHN 46 (483)
Q Consensus 7 ~~~il-~~~-~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~~ 46 (483)
+.|++ |.. -|+-|-..-...||..|++.|.+|.++-.+..
T Consensus 91 ~~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~~ 132 (286)
T 3la6_A 91 QNNVLMMTGVSPSIGMTFVCANLAAVISQTNKRVLLIDCDMR 132 (286)
T ss_dssp TCCEEEEEESSSSSSHHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeccCC
Confidence 33443 333 36789999999999999999999999976543
No 79
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=77.04 E-value=31 Score=28.77 Aligned_cols=143 Identities=19% Similarity=0.153 Sum_probs=76.2
Q ss_pred CeEEEEecCcccCCCHHHHHHHHHHHHhCCCeEEEEEcCCccCCCCCCCCCChhhhhhcCCCceeEEeccCHHHHhccCC
Q 011531 292 KSVLYVSFGSLVGLTREQMSELWHGLVNRGQRFLLVVRPDLILGEPGAAETPLAQNEGTEERNRFIVSWAPQEEVLAHPA 371 (483)
Q Consensus 292 ~~vi~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~ 371 (483)
+|.|-|-+||.. +....+++.+.|+.+|..+-..+ -+....|+.+.+-... .....
T Consensus 22 kp~V~IimGS~S--D~~v~~~a~~~L~~~gI~~e~~V--------~SAHRtp~~l~~~~~~--------------a~~~g 77 (181)
T 4b4k_A 22 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKV--------VSAHRTPDYMFEYAET--------------ARERG 77 (181)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEE--------CCTTTSHHHHHHHHHH--------------TTTTT
T ss_pred CccEEEEECCHh--HHHHHHHHHHHHHHcCCCeeEEE--------EccccChHHHHHHHHH--------------HHhcC
Confidence 566888899877 66778888999999988764444 1222445544321100 01123
Q ss_pred ccceeeccCchhHHHHH---HhCCceeccccccch---hHHHHHHHHhhccceecC-CCCC---HHHHHHHHHHHHh--H
Q 011531 372 VGGFLTHGGWNSTLEGI---AAGVPMICWPQFSDQ---LVNSRCVSEVWKIGFDMK-DTCD---GSIIEKLVRDLME--N 439 (483)
Q Consensus 372 ~~~~ItHgG~gs~~eal---~~GvP~l~~P~~~DQ---~~na~~v~~~~G~G~~l~-~~~~---~~~l~~~i~~ll~--~ 439 (483)
++++|.=.|.-.-+-.+ ..-+|+|.+|..... .+.-.-+++ .--|+-+- -... ...-.-.-.++|. |
T Consensus 78 ~~ViIa~AG~aahLpGvvAa~T~~PVIGVPv~s~~l~G~DsLlSivQ-MP~GvpVaTvaig~~ga~NAallA~qILa~~d 156 (181)
T 4b4k_A 78 LKVIIAGAGGAAHLPGMVAAKTNLPVIGVPVQSKALNGLDSLLSIVQ-MPGGVPVATVAIGKAGSTNAGLLAAQILGSFH 156 (181)
T ss_dssp CCEEEEEECSSCCHHHHHHTTCCSCEEEEECCCTTTTTHHHHHHHHT-CCTTCCCEECCSSHHHHHHHHHHHHHHHTTTC
T ss_pred ceEEEEeccccccchhhHHhcCCCCEEEEecCCCCccchhhHHHHHh-CCCCCceEEEecCCccHHHHHHHHHHHHccCC
Confidence 34477666543222222 345699999986532 222222323 44444432 1112 1111112234444 5
Q ss_pred hHHHHHHHHHHHHHHHHHHHhc
Q 011531 440 KREEIMGSTDRVATMARDAVNE 461 (483)
Q Consensus 440 ~~~~~~~~a~~l~~~~~~~~~~ 461 (483)
++++++.+..++.+++.+.+
T Consensus 157 --~~l~~kl~~~r~~~~~~v~~ 176 (181)
T 4b4k_A 157 --DDIHDALELRREAIEKDVRE 176 (181)
T ss_dssp --HHHHHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHHHHHH
Confidence 88899998888888765433
No 80
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=76.96 E-value=3.1 Score=36.93 Aligned_cols=38 Identities=13% Similarity=0.076 Sum_probs=33.5
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCCC
Q 011531 8 PHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTDH 45 (483)
Q Consensus 8 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~ 45 (483)
|||+|..-|+-|-..-...||..|+++|++|.++-.+.
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 38 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGDP 38 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTTTCSCEEEEEECT
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 67888777888999999999999999999999997654
No 81
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=76.85 E-value=13 Score=33.68 Aligned_cols=41 Identities=17% Similarity=0.243 Sum_probs=32.3
Q ss_pred CCCEEEEEcC--CCCCCHHHHHHHHHHHHhCCcEEEEEeCCCc
Q 011531 6 VNPHVVLLPY--PLQGHIKPMMSLAELLGSANFQVTFVNTDHN 46 (483)
Q Consensus 6 ~~~~il~~~~--~~~GH~~p~l~La~~L~~rGH~V~~~~~~~~ 46 (483)
+++|+++++. |+-|-..-...||..|+++|.+|.++-.+..
T Consensus 80 ~~~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLLID~D~~ 122 (271)
T 3bfv_A 80 SAVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDMR 122 (271)
T ss_dssp CCCCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred CCCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 4455555543 6789899999999999999999999977543
No 82
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=76.62 E-value=8.2 Score=36.29 Aligned_cols=41 Identities=20% Similarity=0.098 Sum_probs=34.4
Q ss_pred CCCEEEEEcC-CCCCCHHHHHHHHHHHHhCCcEEEEEeCCCc
Q 011531 6 VNPHVVLLPY-PLQGHIKPMMSLAELLGSANFQVTFVNTDHN 46 (483)
Q Consensus 6 ~~~~il~~~~-~~~GH~~p~l~La~~L~~rGH~V~~~~~~~~ 46 (483)
+.++|+|++. |+-|-..-...+|..|+++|++|.++..+..
T Consensus 14 ~~~~i~~~sgkGGvGKTt~a~~lA~~la~~g~~vllid~D~~ 55 (334)
T 3iqw_A 14 RSLRWIFVGGKGGVGKTTTSCSLAIQLAKVRRSVLLLSTDPA 55 (334)
T ss_dssp TTCCEEEEECSTTSSHHHHHHHHHHHHTTSSSCEEEEECCSS
T ss_pred CCeEEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEECCCC
Confidence 3456666655 7889999999999999999999999998753
No 83
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=76.09 E-value=5.4 Score=39.07 Aligned_cols=42 Identities=14% Similarity=0.215 Sum_probs=35.9
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCCCchh
Q 011531 7 NPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTDHNHD 48 (483)
Q Consensus 7 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~~~~ 48 (483)
+..|+++..++-|-..-...||..|+++|++|.++..+.+..
T Consensus 100 p~vIlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R~ 141 (443)
T 3dm5_A 100 PTILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRP 141 (443)
T ss_dssp SEEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCSST
T ss_pred CeEEEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcch
Confidence 456677777889999999999999999999999999876644
No 84
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=74.75 E-value=3.4 Score=35.94 Aligned_cols=44 Identities=14% Similarity=0.092 Sum_probs=36.1
Q ss_pred CCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCCCchhhh
Q 011531 6 VNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTDHNHDLL 50 (483)
Q Consensus 6 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~~~~~~ 50 (483)
+++||++.-.|+.|-++ ...|.+.|+++|++|.++.++.-...+
T Consensus 3 ~~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~~A~~fi 46 (209)
T 3zqu_A 3 GPERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISKAAQLVM 46 (209)
T ss_dssp SCSEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECHHHHHHH
T ss_pred CCCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECccHHHHH
Confidence 45799988888877766 899999999999999999995444444
No 85
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=73.93 E-value=4.4 Score=35.23 Aligned_cols=42 Identities=21% Similarity=0.166 Sum_probs=33.5
Q ss_pred CCCCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCCCch
Q 011531 4 SHVNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTDHNH 47 (483)
Q Consensus 4 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~~~ 47 (483)
..+++||++...|+.+-+. ...|.+.|+++| +|.++.++.-.
T Consensus 16 ~l~~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A~ 57 (209)
T 1mvl_A 16 TPRKPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSSL 57 (209)
T ss_dssp ---CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGGG
T ss_pred ccCCCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchHH
Confidence 3456799999999988666 899999999999 99999996443
No 86
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=73.07 E-value=4.9 Score=34.92 Aligned_cols=47 Identities=19% Similarity=0.063 Sum_probs=40.3
Q ss_pred CCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCCCchhhhhh
Q 011531 6 VNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTDHNHDLLLR 52 (483)
Q Consensus 6 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~~~~~~~~ 52 (483)
.+.++++.+.++..|-....-++..|..+|++|.+++.....+.+.+
T Consensus 87 ~~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp~~~l~~ 133 (210)
T 1y80_A 87 SVGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIEPGKFVE 133 (210)
T ss_dssp CCCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBCHHHHHH
T ss_pred CCCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHH
Confidence 45699999999999999999999999999999999987655555544
No 87
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=72.76 E-value=5.7 Score=34.72 Aligned_cols=48 Identities=13% Similarity=0.082 Sum_probs=40.4
Q ss_pred CCCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCCCchhhhhh
Q 011531 5 HVNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTDHNHDLLLR 52 (483)
Q Consensus 5 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~~~~~~~~ 52 (483)
.++.||++.+.++-.|-....-++..|..+|++|++++.....+.+.+
T Consensus 90 ~~~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~iv~ 137 (215)
T 3ezx_A 90 EEAGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDVLNENVVE 137 (215)
T ss_dssp --CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSCCHHHHHH
T ss_pred CCCCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCCCHHHHHH
Confidence 456899999999999999999999999999999999987655555544
No 88
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=72.26 E-value=4.6 Score=36.27 Aligned_cols=45 Identities=20% Similarity=0.071 Sum_probs=32.2
Q ss_pred CCCCCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCCCchhh
Q 011531 3 RSHVNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTDHNHDL 49 (483)
Q Consensus 3 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~~~~~ 49 (483)
+.+++|||++..=-+. |---+.+|++.|.+ +|+|+++.+.....-
T Consensus 7 ~~~~~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~Sg 51 (261)
T 3ty2_A 7 TATPKLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNRSG 51 (261)
T ss_dssp ----CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCCTT
T ss_pred ccCCCCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCCcC
Confidence 5567799999887655 45557888999987 899999999765443
No 89
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=72.02 E-value=35 Score=27.06 Aligned_cols=80 Identities=19% Similarity=0.258 Sum_probs=0.0
Q ss_pred CCCCCCCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCCCchhhhhhccccccccCCCCCeEEEeCCCCCCCCcc
Q 011531 1 MERSHVNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTDHNHDLLLRNTDITSFCNRFPNFQFRSIPSGLPANVI 80 (483)
Q Consensus 1 ~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~~~p~~l~~~~~ 80 (483)
|..+.++++|+++ ..+-.-...+.+.|.+.|++|..+..
T Consensus 1 M~~~~~~~~ILiv----dd~~~~~~~l~~~L~~~g~~v~~~~~------------------------------------- 39 (154)
T 3gt7_A 1 MSLSNRAGEILIV----EDSPTQAEHLKHILEETGYQTEHVRN------------------------------------- 39 (154)
T ss_dssp ------CCEEEEE----CSCHHHHHHHHHHHHTTTCEEEEESS-------------------------------------
T ss_pred CCcccCCCcEEEE----eCCHHHHHHHHHHHHHCCCEEEEeCC-------------------------------------
Q ss_pred cCCCCHHHHHHHHHHhchHHHHHHHHHhhhhhcCCCCccEEEEcCCCC--cchHHHHHHc-------CCCeEEEec
Q 011531 81 RSGLTAKDVFDAMKAVSKPAFRDLLISLREETEQRQSPTCVIADGILC--FLTLDVSEEL-------QIPLLALRT 147 (483)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~D~VI~D~~~~--~~~~~~A~~l-------gIP~v~~~~ 147 (483)
..+.++.+.+ .+||+||.|.... . +..+.+.+ .+|++.++.
T Consensus 40 --------------------~~~al~~l~~-----~~~dlii~D~~l~~~~-g~~~~~~lr~~~~~~~~pii~~s~ 89 (154)
T 3gt7_A 40 --------------------GREAVRFLSL-----TRPDLIISDVLMPEMD-GYALCRWLKGQPDLRTIPVILLTI 89 (154)
T ss_dssp --------------------HHHHHHHHTT-----CCCSEEEEESCCSSSC-HHHHHHHHHHSTTTTTSCEEEEEC
T ss_pred --------------------HHHHHHHHHh-----CCCCEEEEeCCCCCCC-HHHHHHHHHhCCCcCCCCEEEEEC
No 90
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=71.97 E-value=22 Score=32.66 Aligned_cols=39 Identities=18% Similarity=0.373 Sum_probs=30.8
Q ss_pred CCEEEEEcC--CCCCCHHHHHHHHHHHHhCCcEEEEEeCCC
Q 011531 7 NPHVVLLPY--PLQGHIKPMMSLAELLGSANFQVTFVNTDH 45 (483)
Q Consensus 7 ~~~il~~~~--~~~GH~~p~l~La~~L~~rGH~V~~~~~~~ 45 (483)
++|+++++. |+-|-..-...||..|++.|.+|.++-.+.
T Consensus 103 ~~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~ 143 (299)
T 3cio_A 103 ENNILMITGATPDSGKTFVSSTLAAVIAQSDQKVLFIDADL 143 (299)
T ss_dssp SCCEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCeEEEEECCCCCCChHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 344444433 678999999999999999999999998654
No 91
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=71.48 E-value=33 Score=30.53 Aligned_cols=37 Identities=14% Similarity=0.109 Sum_probs=29.7
Q ss_pred CCCEEEEEcC--CCCCCHHHHHHHHHHHHhCCcEEEEEe
Q 011531 6 VNPHVVLLPY--PLQGHIKPMMSLAELLGSANFQVTFVN 42 (483)
Q Consensus 6 ~~~~il~~~~--~~~GH~~p~l~La~~L~~rGH~V~~~~ 42 (483)
++|+.+|++. ..-|-..-.+.|++.|+++|++|.++-
T Consensus 24 ~~m~~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~fK 62 (251)
T 3fgn_A 24 SHMTILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCK 62 (251)
T ss_dssp SSCEEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred cCCCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEe
Confidence 4566655554 356889999999999999999999885
No 92
>1ihu_A Arsenical pump-driving ATPase; aluminum fluoride, ADP, ARSA ATPase, ATP binding site, hydro; HET: ADP; 2.15A {Escherichia coli} SCOP: c.37.1.10 c.37.1.10 PDB: 1f48_A* 1ii0_A* 1ii9_A*
Probab=71.13 E-value=7.7 Score=39.66 Aligned_cols=46 Identities=17% Similarity=0.054 Sum_probs=36.1
Q ss_pred CCCEEEEEcC-CCCCCHHHHHHHHHHHHhCCcEEEEEeCCCchhhhhh
Q 011531 6 VNPHVVLLPY-PLQGHIKPMMSLAELLGSANFQVTFVNTDHNHDLLLR 52 (483)
Q Consensus 6 ~~~~il~~~~-~~~GH~~p~l~La~~L~~rGH~V~~~~~~~~~~~~~~ 52 (483)
+..+++|++. |+-|-..-...+|..|+++|++|.++..+. ...+..
T Consensus 6 ~~~~i~~~sgkGGvGKTT~a~~lA~~lA~~G~rVLlvd~D~-~~~l~~ 52 (589)
T 1ihu_A 6 NIPPYLFFTGKGGVGKTSISCATAIRLAEQGKRVLLVSTDP-ASNVGQ 52 (589)
T ss_dssp SCCSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT-TCCHHH
T ss_pred CCCEEEEEeCCCcCHHHHHHHHHHHHHHHCCCcEEEEECCC-CcCHHH
Confidence 4456655555 788999999999999999999999999875 344433
No 93
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=70.75 E-value=6.2 Score=35.57 Aligned_cols=46 Identities=15% Similarity=0.036 Sum_probs=39.1
Q ss_pred CCCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCCCchhhh
Q 011531 5 HVNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTDHNHDLL 50 (483)
Q Consensus 5 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~~~~~~ 50 (483)
..+.+|++.+.++..|-....-++..|..+|++|++++.....+.+
T Consensus 121 ~~~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~vp~e~l 166 (258)
T 2i2x_B 121 KTKGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRDVPAEEV 166 (258)
T ss_dssp CCSCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEECCSHHH
T ss_pred CCCCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Confidence 4568999999999999999999999999999999998864443444
No 94
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=70.25 E-value=20 Score=32.05 Aligned_cols=32 Identities=19% Similarity=0.306 Sum_probs=23.1
Q ss_pred CCccEEEEcCCCC--cchHHHHHHcCCCeEEEecc
Q 011531 116 QSPTCVIADGILC--FLTLDVSEELQIPLLALRTH 148 (483)
Q Consensus 116 ~~~D~VI~D~~~~--~~~~~~A~~lgIP~v~~~~~ 148 (483)
..||+||+-...- - +..=|.++|||+|.++-+
T Consensus 157 ~~Pdll~V~Dp~~e~~-Ai~EA~~l~IPvIaivDT 190 (256)
T 2vqe_B 157 RLPDAIFVVDPTKEAI-AVREARKLFIPVIALADT 190 (256)
T ss_dssp SCCSEEEESCTTTTHH-HHHHHHHTTCCCEECCCT
T ss_pred cCCCEEEEeCCccchH-HHHHHHHcCCCEEEEecC
Confidence 4799987654332 3 666788899999998654
No 95
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=70.06 E-value=58 Score=30.16 Aligned_cols=35 Identities=17% Similarity=0.061 Sum_probs=25.4
Q ss_pred CCCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCC
Q 011531 5 HVNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTD 44 (483)
Q Consensus 5 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~ 44 (483)
+++|||+|+..+. .....-++|.++||+|..+.+.
T Consensus 5 ~~~mrivf~Gt~~-----fa~~~L~~L~~~~~~v~~Vvt~ 39 (318)
T 3q0i_A 5 SQSLRIVFAGTPD-----FAARHLAALLSSEHEIIAVYTQ 39 (318)
T ss_dssp --CCEEEEECCSH-----HHHHHHHHHHTSSSEEEEEECC
T ss_pred ccCCEEEEEecCH-----HHHHHHHHHHHCCCcEEEEEcC
Confidence 3589999997764 3345668888899999877663
No 96
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=69.72 E-value=32 Score=31.86 Aligned_cols=34 Identities=18% Similarity=0.046 Sum_probs=24.9
Q ss_pred CCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCC
Q 011531 6 VNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTD 44 (483)
Q Consensus 6 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~ 44 (483)
++|||+|+..+.. .....+.|.++||+|..+.+.
T Consensus 2 ~~mrIvf~Gt~~f-----a~~~L~~L~~~~~~i~~Vvt~ 35 (314)
T 1fmt_A 2 ESLRIIFAGTPDF-----AARHLDALLSSGHNVVGVFTQ 35 (314)
T ss_dssp CCCEEEEEECSHH-----HHHHHHHHHHTTCEEEEEECC
T ss_pred CCCEEEEEecCHH-----HHHHHHHHHHCCCcEEEEEeC
Confidence 5699999987643 245557777889999877653
No 97
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=69.35 E-value=14 Score=35.75 Aligned_cols=36 Identities=14% Similarity=0.092 Sum_probs=25.4
Q ss_pred CCCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCCC
Q 011531 5 HVNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTDH 45 (483)
Q Consensus 5 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~ 45 (483)
+++.||++++.+... . .+.++.++.|++|+++.+..
T Consensus 3 ~~~k~l~Il~~~~~~--~---~i~~aa~~lG~~vv~v~~~~ 38 (425)
T 3vot_A 3 KRNKNLAIICQNKHL--P---FIFEEAERLGLKVTFFYNSA 38 (425)
T ss_dssp CCCCEEEEECCCTTC--C---HHHHHHHHTTCEEEEEEETT
T ss_pred CCCcEEEEECCChhH--H---HHHHHHHHCCCEEEEEECCC
Confidence 466788888765432 1 35678888899999987643
No 98
>2woo_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; 3.01A {Schizosaccharomyces pombe}
Probab=68.68 E-value=18 Score=33.72 Aligned_cols=46 Identities=17% Similarity=0.109 Sum_probs=35.6
Q ss_pred CCEEEEE-cCCCCCCHHHHHHHHHHHHhCCcEEEEEeCCCchhhhhhc
Q 011531 7 NPHVVLL-PYPLQGHIKPMMSLAELLGSANFQVTFVNTDHNHDLLLRN 53 (483)
Q Consensus 7 ~~~il~~-~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~~~~~~~~~ 53 (483)
..+|+|+ .-|+-|-..-...||..|+++|++|.++..+.. ..+...
T Consensus 18 ~~~i~v~sgkGGvGKTTva~~LA~~lA~~G~rVllvD~D~~-~~l~~~ 64 (329)
T 2woo_A 18 SLKWIFVGGKGGVGKTTTSCSLAIQMSKVRSSVLLISTDPA-HNLSDA 64 (329)
T ss_dssp TCCEEEEECSSSSSHHHHHHHHHHHHHTSSSCEEEEECCTT-CHHHHH
T ss_pred CCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEECCCC-cCHHHH
Confidence 3455544 447889999999999999999999999998754 444433
No 99
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=68.48 E-value=49 Score=30.63 Aligned_cols=39 Identities=21% Similarity=0.261 Sum_probs=26.7
Q ss_pred CEEEEEcCCCCC---C--HHHHHHHHHHHHhCCcEEEEEeCCCc
Q 011531 8 PHVVLLPYPLQG---H--IKPMMSLAELLGSANFQVTFVNTDHN 46 (483)
Q Consensus 8 ~~il~~~~~~~G---H--~~p~l~La~~L~~rGH~V~~~~~~~~ 46 (483)
..|++.|....+ . ..-+..+++.|.++|++|.+++.+..
T Consensus 181 ~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~g~~~e 224 (348)
T 1psw_A 181 PMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAKD 224 (348)
T ss_dssp CEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGGG
T ss_pred cEEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEEeChhh
Confidence 456666654222 2 23688999999999999998776543
No 100
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=68.32 E-value=35 Score=28.60 Aligned_cols=138 Identities=14% Similarity=0.132 Sum_probs=76.3
Q ss_pred CCeEEEEecCcccCCCHHHHHHHHHHHHhCCCeEEEEEcCCccCCCCCCCCCChhhhhhcCCCceeEEeccCHHHHhccC
Q 011531 291 PKSVLYVSFGSLVGLTREQMSELWHGLVNRGQRFLLVVRPDLILGEPGAAETPLAQNEGTEERNRFIVSWAPQEEVLAHP 370 (483)
Q Consensus 291 ~~~vi~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~ 370 (483)
.-|.|-|-+||.+ +....+++...++.+|.++=.-+ -+....|+.+.+-... ...-
T Consensus 12 ~~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V--------~SaHR~p~~l~~~~~~--------------a~~~ 67 (183)
T 1o4v_A 12 HVPRVGIIMGSDS--DLPVMKQAAEILEEFGIDYEITI--------VSAHRTPDRMFEYAKN--------------AEER 67 (183)
T ss_dssp --CEEEEEESCGG--GHHHHHHHHHHHHHTTCEEEEEE--------CCTTTCHHHHHHHHHH--------------TTTT
T ss_pred CCCeEEEEeccHH--HHHHHHHHHHHHHHcCCCeEEEE--------EcccCCHHHHHHHHHH--------------HHhC
Confidence 4466888888876 66777788888888888754444 1222444543321100 0111
Q ss_pred CccceeeccCch----hHHHHHHhCCceecccccc--chhHHH--HHHHHhh--cccee---cCCCCCHHHHHHHHHHHH
Q 011531 371 AVGGFLTHGGWN----STLEGIAAGVPMICWPQFS--DQLVNS--RCVSEVW--KIGFD---MKDTCDGSIIEKLVRDLM 437 (483)
Q Consensus 371 ~~~~~ItHgG~g----s~~eal~~GvP~l~~P~~~--DQ~~na--~~v~~~~--G~G~~---l~~~~~~~~l~~~i~~ll 437 (483)
.++++|.=.|.- ++..++ .-+|+|.+|... -....+ ..+ + . |+.+. +++..++.-++..|..+
T Consensus 68 g~~ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSiv-q-mP~GvpVatV~Id~~~nAa~lAaqIla~- 143 (183)
T 1o4v_A 68 GIEVIIAGAGGAAHLPGMVASI-THLPVIGVPVKTSTLNGLDSLFSIV-Q-MPGGVPVATVAINNAKNAGILAASILGI- 143 (183)
T ss_dssp TCCEEEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHH-T-CCTTCCCEECCTTCHHHHHHHHHHHHHT-
T ss_pred CCcEEEEecCcccccHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHh-c-CCCCCeeEEEecCCchHHHHHHHHHHhc-
Confidence 233477665542 333333 667999999854 233333 233 3 4 53332 23344555555444422
Q ss_pred hHhHHHHHHHHHHHHHHHHHH
Q 011531 438 ENKREEIMGSTDRVATMARDA 458 (483)
Q Consensus 438 ~~~~~~~~~~a~~l~~~~~~~ 458 (483)
.+ +.++++.+.+++.++..
T Consensus 144 ~d--~~l~~kL~~~r~~~~~~ 162 (183)
T 1o4v_A 144 KY--PEIARKVKEYKERMKRE 162 (183)
T ss_dssp TC--HHHHHHHHHHHHHHHHH
T ss_pred CC--HHHHHHHHHHHHHHHHH
Confidence 35 78888888888887765
No 101
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=68.11 E-value=24 Score=33.19 Aligned_cols=100 Identities=9% Similarity=0.110 Sum_probs=58.0
Q ss_pred CCEEEEEcCCCCC--C--HHHHHHHHHHHHhCCcEEEEEeCCCchhhhhhccccccccCCCCCeEEEeCCCCCCCCcccC
Q 011531 7 NPHVVLLPYPLQG--H--IKPMMSLAELLGSANFQVTFVNTDHNHDLLLRNTDITSFCNRFPNFQFRSIPSGLPANVIRS 82 (483)
Q Consensus 7 ~~~il~~~~~~~G--H--~~p~l~La~~L~~rGH~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~~~p~~l~~~~~~~ 82 (483)
+.-|++.|..+.. . ..-+..|++.|.++|++|++++.+...+...+.... .+ -....+. -
T Consensus 185 ~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~~e~~~~~~i~~~------~~-~~~~~l~---------g 248 (349)
T 3tov_A 185 DILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGPMDLEMVQPVVEQ------ME-TKPIVAT---------G 248 (349)
T ss_dssp CCEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCTTTHHHHHHHHHT------CS-SCCEECT---------T
T ss_pred CCEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCcchHHHHHHHHHh------cc-cccEEee---------C
Confidence 3456666665432 1 235899999999999999987775544333221110 00 0001111 0
Q ss_pred CCCHHHHHHHHHHhchHHHHHHHHHhhhhhcCCCCccEEEEcCCCCcchHHHHHHcCCCeEEEec
Q 011531 83 GLTAKDVFDAMKAVSKPAFRDLLISLREETEQRQSPTCVIADGILCFLTLDVSEELQIPLLALRT 147 (483)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~D~VI~D~~~~~~~~~~A~~lgIP~v~~~~ 147 (483)
..+ +.++..-+. ..|++|+- ..+ ...+|..+|+|++.+..
T Consensus 249 ~~s---------------l~e~~ali~-------~a~~~i~~--DsG-~~HlAaa~g~P~v~lfg 288 (349)
T 3tov_A 249 KFQ---------------LGPLAAAMN-------RCNLLITN--DSG-PMHVGISQGVPIVALYG 288 (349)
T ss_dssp CCC---------------HHHHHHHHH-------TCSEEEEE--SSH-HHHHHHTTTCCEEEECS
T ss_pred CCC---------------HHHHHHHHH-------hCCEEEEC--CCC-HHHHHHhcCCCEEEEEC
Confidence 111 233333333 47999986 455 77789999999999854
No 102
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=67.46 E-value=5.9 Score=36.86 Aligned_cols=43 Identities=9% Similarity=0.101 Sum_probs=38.0
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhC--CcEEEEEeCCCchhhh
Q 011531 8 PHVVLLPYPLQGHIKPMMSLAELLGSA--NFQVTFVNTDHNHDLL 50 (483)
Q Consensus 8 ~~il~~~~~~~GH~~p~l~La~~L~~r--GH~V~~~~~~~~~~~~ 50 (483)
|||+++-..+.|++.-..++.+.|+++ +.+|++++.+.+.+-+
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~ 45 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIP 45 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTHHH
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhHHH
Confidence 689999999999999999999999998 9999999996654444
No 103
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=67.33 E-value=38 Score=31.59 Aligned_cols=33 Identities=12% Similarity=-0.060 Sum_probs=23.5
Q ss_pred CCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeC
Q 011531 6 VNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNT 43 (483)
Q Consensus 6 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~ 43 (483)
.+|||+|+. --+....+.++|.++||+|..+.+
T Consensus 21 ~~mrIvf~G-----~~~fa~~~L~~L~~~~~~i~~Vvt 53 (329)
T 2bw0_A 21 QSMKIAVIG-----QSLFGQEVYCHLRKEGHEVVGVFT 53 (329)
T ss_dssp CCCEEEEEC-----CHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCEEEEEc-----CcHHHHHHHHHHHHCCCeEEEEEe
Confidence 459999993 223334567899999999876654
No 104
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=67.12 E-value=6.6 Score=33.74 Aligned_cols=110 Identities=9% Similarity=0.069 Sum_probs=63.9
Q ss_pred CCHHHHHHHHHHHHhCCcEEEEEeCCCchhhhhhccccccccCCCCCeEEEeCCC-------------CCCC-----Ccc
Q 011531 19 GHIKPMMSLAELLGSANFQVTFVNTDHNHDLLLRNTDITSFCNRFPNFQFRSIPS-------------GLPA-----NVI 80 (483)
Q Consensus 19 GH~~p~l~La~~L~~rGH~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~~~p~-------------~l~~-----~~~ 80 (483)
|.+.-.+.+|+++ ..|.+|.+... .+...+.+.. ++.++.++- .+.. +..
T Consensus 36 ~~l~~~v~~a~~~-~~~~dVIISRG-gta~~lr~~~----------~iPVV~I~~s~~Dil~al~~a~~~~~kIavvg~~ 103 (196)
T 2q5c_A 36 ASLTRASKIAFGL-QDEVDAIISRG-ATSDYIKKSV----------SIPSISIKVTRFDTMRAVYNAKRFGNELALIAYK 103 (196)
T ss_dssp CCHHHHHHHHHHH-TTTCSEEEEEH-HHHHHHHTTC----------SSCEEEECCCHHHHHHHHHHHGGGCSEEEEEEES
T ss_pred CCHHHHHHHHHHh-cCCCeEEEECC-hHHHHHHHhC----------CCCEEEEcCCHhHHHHHHHHHHhhCCcEEEEeCc
Confidence 5566677788888 77888765554 4555554432 255555541 0000 000
Q ss_pred cCCCCHHHHHHHHHHh-------chHHHHHHHHHhhhhhcCCCCccEEEEcCCCCcchHHHHHHcCCCeEEEecch
Q 011531 81 RSGLTAKDVFDAMKAV-------SKPAFRDLLISLREETEQRQSPTCVIADGILCFLTLDVSEELQIPLLALRTHN 149 (483)
Q Consensus 81 ~~~~~~~~~~~~~~~~-------~~~~~~~ll~~~~~~~~~~~~~D~VI~D~~~~~~~~~~A~~lgIP~v~~~~~~ 149 (483)
........+.+.+... ........++++++ ...|+||.|.. ....|+++|+|.+.+.++.
T Consensus 104 ~~~~~~~~~~~ll~~~i~~~~~~~~~e~~~~i~~l~~-----~G~~vvVG~~~----~~~~A~~~Gl~~vli~sg~ 170 (196)
T 2q5c_A 104 HSIVDKHEIEAMLGVKIKEFLFSSEDEITTLISKVKT-----ENIKIVVSGKT----VTDEAIKQGLYGETINSGE 170 (196)
T ss_dssp SCSSCHHHHHHHHTCEEEEEEECSGGGHHHHHHHHHH-----TTCCEEEECHH----HHHHHHHTTCEEEECCCCH
T ss_pred chhhHHHHHHHHhCCceEEEEeCCHHHHHHHHHHHHH-----CCCeEEECCHH----HHHHHHHcCCcEEEEecCH
Confidence 1222232222222210 23456777887775 68999999843 6889999999999987743
No 105
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=66.66 E-value=5.5 Score=34.26 Aligned_cols=43 Identities=12% Similarity=0.066 Sum_probs=34.4
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhC-CcEEEEEeCCCchhhhh
Q 011531 8 PHVVLLPYPLQGHIKPMMSLAELLGSA-NFQVTFVNTDHNHDLLL 51 (483)
Q Consensus 8 ~~il~~~~~~~GH~~p~l~La~~L~~r-GH~V~~~~~~~~~~~~~ 51 (483)
|||++.-.|+.|-++ ...+.+.|+++ |++|.++.++.-...+.
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~~A~~fi~ 44 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSKWAKTTIE 44 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECHHHHHHHH
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECchHHHHhH
Confidence 588888888876655 99999999999 99999999955444443
No 106
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=66.37 E-value=8.5 Score=27.07 Aligned_cols=50 Identities=18% Similarity=0.270 Sum_probs=35.5
Q ss_pred HhCCceeccccccchhHHHHHHHHhhccceecC--CCCCHHHHHHHHHHHHh
Q 011531 389 AAGVPMICWPQFSDQLVNSRCVSEVWKIGFDMK--DTCDGSIIEKLVRDLME 438 (483)
Q Consensus 389 ~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~--~~~~~~~l~~~i~~ll~ 438 (483)
-+|+|++++--.+.|.+.-..-.|...-|+..+ ++-++++|.+.+++.|.
T Consensus 49 dngkplvvfvngasqndvnefqneakkegvsydvlkstdpeeltqrvreflk 100 (112)
T 2lnd_A 49 DNGKPLVVFVNGASQNDVNEFQNEAKKEGVSYDVLKSTDPEELTQRVREFLK 100 (112)
T ss_dssp TCCSCEEEEECSCCHHHHHHHHHHHHHHTCEEEEEECCCHHHHHHHHHHHHH
T ss_pred hcCCeEEEEecCcccccHHHHHHHHHhcCcchhhhccCCHHHHHHHHHHHHH
Confidence 478999888887777665433323334455544 78899999999999886
No 107
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=65.16 E-value=52 Score=29.05 Aligned_cols=35 Identities=11% Similarity=0.206 Sum_probs=27.9
Q ss_pred CEEEEEcC--CCCCCHHHHHHHHHHHHhCCcEEEEEe
Q 011531 8 PHVVLLPY--PLQGHIKPMMSLAELLGSANFQVTFVN 42 (483)
Q Consensus 8 ~~il~~~~--~~~GH~~p~l~La~~L~~rGH~V~~~~ 42 (483)
+|.+|++. ..-|-..-.+.|++.|+++|.+|.++=
T Consensus 21 ~k~i~ItgT~t~vGKT~vs~gL~~~L~~~G~~V~~fK 57 (242)
T 3qxc_A 21 GHMLFISATNTNAGKTTCARLLAQYCNACGVKTILLK 57 (242)
T ss_dssp CEEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CcEEEEEeCCCCCcHHHHHHHHHHHHHhCCCceEEEe
Confidence 45444444 456889999999999999999999884
No 108
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=64.71 E-value=8.6 Score=32.30 Aligned_cols=39 Identities=13% Similarity=0.072 Sum_probs=32.1
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCCCch
Q 011531 8 PHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTDHNH 47 (483)
Q Consensus 8 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~~~ 47 (483)
+||++.-.|+.|=++ ...+.+.|+++|++|.++.++.-.
T Consensus 6 k~IllgvTGs~aa~k-~~~ll~~L~~~g~~V~vv~T~~A~ 44 (175)
T 3qjg_A 6 ENVLICLCGSVNSIN-ISHYIIELKSKFDEVNVIASTNGR 44 (175)
T ss_dssp CEEEEEECSSGGGGG-HHHHHHHHTTTCSEEEEEECTGGG
T ss_pred CEEEEEEeCHHHHHH-HHHHHHHHHHCCCEEEEEECcCHH
Confidence 688888888866554 899999999999999999996443
No 109
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=63.09 E-value=29 Score=27.51 Aligned_cols=61 Identities=10% Similarity=0.053 Sum_probs=40.1
Q ss_pred hCCceeccccccchhHHHHHHHHhhccceecCCCCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHH
Q 011531 390 AGVPMICWPQFSDQLVNSRCVSEVWKIGFDMKDTCDGSIIEKLVRDLMENKREEIMGSTDRVATM 454 (483)
Q Consensus 390 ~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~~i~~ll~~~~~~~~~~a~~l~~~ 454 (483)
..+|+|++--..+.......+ + .|+--.+.+.++.+.|.++|++++.. ..++...+++++.
T Consensus 74 ~~~pii~ls~~~~~~~~~~~~-~-~g~~~~l~kP~~~~~L~~~i~~~~~~--~~~~~~~~~~~~~ 134 (155)
T 1qkk_A 74 PDLPMILVTGHGDIPMAVQAI-Q-DGAYDFIAKPFAADRLVQSARRAEEK--RRLVMENRSLRRA 134 (155)
T ss_dssp TTSCEEEEECGGGHHHHHHHH-H-TTCCEEEESSCCHHHHHHHHHHHHHH--HHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHH-h-cCCCeEEeCCCCHHHHHHHHHHHHHH--HHHHHHHHHHHHH
Confidence 478888876655544444444 4 67766676789999999999999985 4444433343333
No 110
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=62.65 E-value=7.7 Score=33.43 Aligned_cols=39 Identities=18% Similarity=-0.035 Sum_probs=32.9
Q ss_pred CCCEEEEEcCCCCCCHH-HHHHHHHHHHhCCcEEEEEeCCC
Q 011531 6 VNPHVVLLPYPLQGHIK-PMMSLAELLGSANFQVTFVNTDH 45 (483)
Q Consensus 6 ~~~~il~~~~~~~GH~~-p~l~La~~L~~rGH~V~~~~~~~ 45 (483)
+++||++.-.|+ +..+ -...+.++|+++|++|.++.++.
T Consensus 6 ~~k~I~lgiTGs-~aa~~k~~~ll~~L~~~g~eV~vv~T~~ 45 (201)
T 3lqk_A 6 AGKHVGFGLTGS-HCTYHEVLPQMERLVELGAKVTPFVTHT 45 (201)
T ss_dssp TTCEEEEECCSC-GGGGGGTHHHHHHHHHTTCEEEEECSSC
T ss_pred CCCEEEEEEECh-HHHHHHHHHHHHHHhhCCCEEEEEEChh
Confidence 457898888887 5566 79999999999999999999954
No 111
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=62.37 E-value=18 Score=31.76 Aligned_cols=40 Identities=5% Similarity=-0.010 Sum_probs=30.4
Q ss_pred CCEEEEEcCCCCCCHHHHHHHH------HHHHhCC-cEEEEEeCCCc
Q 011531 7 NPHVVLLPYPLQGHIKPMMSLA------ELLGSAN-FQVTFVNTDHN 46 (483)
Q Consensus 7 ~~~il~~~~~~~GH~~p~l~La------~~L~~rG-H~V~~~~~~~~ 46 (483)
..+.++++.|+.+.++.++.-+ +.|.+.| .+|++.+....
T Consensus 27 ~~~~VlVtgGS~~~~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~ 73 (224)
T 2jzc_A 27 EEKALFVTCGATVPFPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNY 73 (224)
T ss_dssp CSCCEEEECCSCCSCHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSS
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCc
Confidence 4566788888887788877765 8898888 78888877543
No 112
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=61.04 E-value=14 Score=32.47 Aligned_cols=32 Identities=25% Similarity=0.149 Sum_probs=22.0
Q ss_pred CccEEEEcCCCCc-chHHHHHHcCCCeEEEecc
Q 011531 117 SPTCVIADGILCF-LTLDVSEELQIPLLALRTH 148 (483)
Q Consensus 117 ~~D~VI~D~~~~~-~~~~~A~~lgIP~v~~~~~ 148 (483)
.||+||+-...-. .+..=|.++|||+|.++-+
T Consensus 157 ~Pdll~v~Dp~~e~~ai~EA~~l~IPvIaivDT 189 (231)
T 3bbn_B 157 LPDIVIIVDQQEEYTALRECITLGIPTICLIDT 189 (231)
T ss_dssp CCSEEEESCTTTTHHHHHHHHTTTCCEEECCCS
T ss_pred CCCEEEEeCCccccHHHHHHHHhCCCEEEEecC
Confidence 5999876543322 1556678899999998643
No 113
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=60.63 E-value=25 Score=30.67 Aligned_cols=40 Identities=15% Similarity=0.045 Sum_probs=31.6
Q ss_pred CCEE-EEEc-CCCCCCHHHHHHHHHHHHhC-CcEEEEEeCCCc
Q 011531 7 NPHV-VLLP-YPLQGHIKPMMSLAELLGSA-NFQVTFVNTDHN 46 (483)
Q Consensus 7 ~~~i-l~~~-~~~~GH~~p~l~La~~L~~r-GH~V~~~~~~~~ 46 (483)
++|+ +|+. -|+-|-..-...||..|+++ |++|.++-.+..
T Consensus 3 ~~~vI~v~s~kGGvGKTt~a~~LA~~la~~~g~~VlliD~D~~ 45 (245)
T 3ea0_A 3 AKRVFGFVSAKGGDGGSCIAANFAFALSQEPDIHVLAVDISLP 45 (245)
T ss_dssp CCEEEEEEESSTTSSHHHHHHHHHHHHTTSTTCCEEEEECCTT
T ss_pred CCeEEEEECCCCCcchHHHHHHHHHHHHhCcCCCEEEEECCCC
Confidence 4454 3443 37889999999999999999 999999987644
No 114
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=60.51 E-value=39 Score=28.27 Aligned_cols=141 Identities=13% Similarity=0.086 Sum_probs=76.3
Q ss_pred eEEEEecCcccCCCHHHHHHHHHHHHhCCCeEEEEEcCCccCCCCCCCCCChhhhhhcCCCceeEEeccCHHHHhccCCc
Q 011531 293 SVLYVSFGSLVGLTREQMSELWHGLVNRGQRFLLVVRPDLILGEPGAAETPLAQNEGTEERNRFIVSWAPQEEVLAHPAV 372 (483)
Q Consensus 293 ~vi~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~ 372 (483)
+.|-|-+||.. +....+++...++.+|..+-..+ -+....|+.+.+-... ...-.+
T Consensus 22 ~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V--------~SaHR~p~~l~~~~~~--------------a~~~g~ 77 (182)
T 1u11_A 22 PVVGIIMGSQS--DWETMRHADALLTELEIPHETLI--------VSAHRTPDRLADYART--------------AAERGL 77 (182)
T ss_dssp CSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEE--------CCTTTCHHHHHHHHHH--------------TTTTTC
T ss_pred CEEEEEECcHH--HHHHHHHHHHHHHHcCCCeEEEE--------EcccCCHHHHHHHHHH--------------HHhCCC
Confidence 44777778776 66777788888888888754433 1222444543321100 001123
Q ss_pred cceeeccCch----hHHHHHHhCCceecccccc--chhHHHH--HHHHhhcccee---cC--CCCCHHHHHHHHHHHHhH
Q 011531 373 GGFLTHGGWN----STLEGIAAGVPMICWPQFS--DQLVNSR--CVSEVWKIGFD---MK--DTCDGSIIEKLVRDLMEN 439 (483)
Q Consensus 373 ~~~ItHgG~g----s~~eal~~GvP~l~~P~~~--DQ~~na~--~v~~~~G~G~~---l~--~~~~~~~l~~~i~~ll~~ 439 (483)
+++|.=.|.- ++.-++ .-+|+|.+|... .....+- .++--.|+.+. ++ +..+..-++..|.. +.+
T Consensus 78 ~ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivqmP~GvpVatV~I~~a~~~nAallAaqIla-~~d 155 (182)
T 1u11_A 78 NVIIAGAGGAAHLPGMCAAW-TRLPVLGVPVESRALKGMDSLLSIVQMPGGVPVGTLAIGASGAKNAALLAASILA-LYN 155 (182)
T ss_dssp CEEEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHCCCTTSCCEECCSSHHHHHHHHHHHHHHHG-GGC
T ss_pred cEEEEecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCCCCceEEEecCCccchHHHHHHHHHHc-cCC
Confidence 3477766642 344333 467999999854 2222321 23101245422 32 23444444444432 235
Q ss_pred hHHHHHHHHHHHHHHHHHHHhc
Q 011531 440 KREEIMGSTDRVATMARDAVNE 461 (483)
Q Consensus 440 ~~~~~~~~a~~l~~~~~~~~~~ 461 (483)
+.++++.+.+++..++.+.+
T Consensus 156 --~~l~~kL~~~r~~~~~~v~~ 175 (182)
T 1u11_A 156 --PALAARLETWRALQTASVPN 175 (182)
T ss_dssp --HHHHHHHHHHHHHHHHHSCS
T ss_pred --HHHHHHHHHHHHHHHHHHHH
Confidence 88999999999998876443
No 115
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=59.98 E-value=52 Score=30.41 Aligned_cols=33 Identities=18% Similarity=0.145 Sum_probs=25.7
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCC
Q 011531 7 NPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTD 44 (483)
Q Consensus 7 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~ 44 (483)
+|||+|+..+..+ ...-++|.++||+|..+.+.
T Consensus 2 ~mrivf~Gtp~fa-----~~~L~~L~~~~~~v~~Vvt~ 34 (314)
T 3tqq_A 2 SLKIVFAGTPQFA-----VPTLRALIDSSHRVLAVYTQ 34 (314)
T ss_dssp CCEEEEEECSGGG-----HHHHHHHHHSSSEEEEEECC
T ss_pred CcEEEEECCCHHH-----HHHHHHHHHCCCeEEEEEeC
Confidence 5899999888655 34567888899999877763
No 116
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=59.92 E-value=7.9 Score=33.18 Aligned_cols=41 Identities=10% Similarity=-0.029 Sum_probs=33.7
Q ss_pred CCCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCCCc
Q 011531 5 HVNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTDHN 46 (483)
Q Consensus 5 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~~ 46 (483)
-++.||++...|+.|=++ ...+.+.|.++|++|.++.++.-
T Consensus 6 l~~k~IllgvTGs~aa~k-~~~l~~~L~~~g~~V~vv~T~~A 46 (194)
T 1p3y_1 6 LKDKKLLIGICGSISSVG-ISSYLLYFKSFFKEIRVVMTKTA 46 (194)
T ss_dssp GGGCEEEEEECSCGGGGG-THHHHHHHTTTSSEEEEEECHHH
T ss_pred cCCCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEEchhH
Confidence 456789888888866665 78999999999999999999543
No 117
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=59.52 E-value=6.3 Score=32.02 Aligned_cols=34 Identities=12% Similarity=0.103 Sum_probs=26.5
Q ss_pred CCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCC
Q 011531 6 VNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTD 44 (483)
Q Consensus 6 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~ 44 (483)
.+.|++++.+ |++- ..+++.|.++||+|+++...
T Consensus 2 ~~~~vlI~G~---G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 2 RKDHFIVCGH---SILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CCSCEEEECC---SHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CCCcEEEECC---CHHH--HHHHHHHHHCCCCEEEEECC
Confidence 3568888854 4443 78899999999999999874
No 118
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=58.24 E-value=8.8 Score=31.20 Aligned_cols=37 Identities=19% Similarity=0.288 Sum_probs=27.1
Q ss_pred CCCCCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCC
Q 011531 3 RSHVNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTD 44 (483)
Q Consensus 3 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~ 44 (483)
...+.++|+++..|..| ..+++.|.++|++|+++...
T Consensus 15 ~~~~~~~v~IiG~G~iG-----~~la~~L~~~g~~V~vid~~ 51 (155)
T 2g1u_A 15 KKQKSKYIVIFGCGRLG-----SLIANLASSSGHSVVVVDKN 51 (155)
T ss_dssp --CCCCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEESC
T ss_pred cccCCCcEEEECCCHHH-----HHHHHHHHhCCCeEEEEECC
Confidence 34556899998654433 56899999999999988764
No 119
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=58.07 E-value=31 Score=32.91 Aligned_cols=35 Identities=9% Similarity=-0.028 Sum_probs=27.9
Q ss_pred CCCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCC
Q 011531 5 HVNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTD 44 (483)
Q Consensus 5 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~ 44 (483)
.+.+||+++..+.. .+.+++++++.|++|+++..+
T Consensus 5 ~~~~~ilI~g~g~~-----~~~~~~a~~~~G~~~v~v~~~ 39 (403)
T 4dim_A 5 YDNKRLLILGAGRG-----QLGLYKAAKELGIHTIAGTMP 39 (403)
T ss_dssp -CCCEEEEECCCGG-----GHHHHHHHHHHTCEEEEEECS
T ss_pred cCCCEEEEECCcHh-----HHHHHHHHHHCCCEEEEEcCC
Confidence 45789999988764 366899999999999999764
No 120
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=57.77 E-value=10 Score=32.84 Aligned_cols=39 Identities=13% Similarity=-0.126 Sum_probs=31.5
Q ss_pred CCCEEEEEcCCCCCCHHH-HHHHHHHHHhCCcEEEEEeCCC
Q 011531 6 VNPHVVLLPYPLQGHIKP-MMSLAELLGSANFQVTFVNTDH 45 (483)
Q Consensus 6 ~~~~il~~~~~~~GH~~p-~l~La~~L~~rGH~V~~~~~~~ 45 (483)
+++||++.-.|+ +..+- ...+.+.|+++|++|.++.++.
T Consensus 4 ~~k~IllgiTGs-iaayk~~~~ll~~L~~~g~eV~vv~T~~ 43 (207)
T 3mcu_A 4 KGKRIGFGFTGS-HCTYEEVMPHLEKLIAEGAEVRPVVSYT 43 (207)
T ss_dssp TTCEEEEEECSC-GGGGTTSHHHHHHHHHTTCEEEEEECC-
T ss_pred CCCEEEEEEECh-HHHHHHHHHHHHHHHhCCCEEEEEEehH
Confidence 356888887777 45665 8899999999999999999954
No 121
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=57.63 E-value=60 Score=28.77 Aligned_cols=39 Identities=13% Similarity=0.062 Sum_probs=31.3
Q ss_pred EEEEEcC-CCCCCHHHHHHHHHHHHhCCcEEEEEeCCCch
Q 011531 9 HVVLLPY-PLQGHIKPMMSLAELLGSANFQVTFVNTDHNH 47 (483)
Q Consensus 9 ~il~~~~-~~~GH~~p~l~La~~L~~rGH~V~~~~~~~~~ 47 (483)
.|+|+.. |+-|=..-...||..|+++|++|.++-.+...
T Consensus 20 vI~v~s~kGGvGKTT~a~nLA~~la~~G~~VlliD~D~~~ 59 (262)
T 2ph1_A 20 RIAVMSGKGGVGKSTVTALLAVHYARQGKKVGILDADFLG 59 (262)
T ss_dssp EEEEECSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCSSC
T ss_pred EEEEEcCCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 4444443 67899999999999999999999999876544
No 122
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=56.88 E-value=69 Score=25.11 Aligned_cols=38 Identities=18% Similarity=0.155 Sum_probs=23.2
Q ss_pred CCCCCCCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEe
Q 011531 1 MERSHVNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVN 42 (483)
Q Consensus 1 ~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~ 42 (483)
|..+.+.++|+++- .+-.-...+.+.|.+.|++|..+.
T Consensus 1 Ms~~~~~~~iLivd----d~~~~~~~l~~~L~~~g~~v~~~~ 38 (154)
T 2rjn_A 1 MSLNYKNYTVMLVD----DEQPILNSLKRLIKRLGCNIITFT 38 (154)
T ss_dssp ---CCSCCEEEEEC----SCHHHHHHHHHHHHTTTCEEEEES
T ss_pred CCCCCCCCeEEEEc----CCHHHHHHHHHHHHHcCCeEEEeC
Confidence 55556677777764 444556667777777788777443
No 123
>2xxa_A Signal recognition particle protein; protein transport, RNA/RNA binding protein, hydrolase, gtpas; HET: GCP; 3.94A {Escherichia coli} PDB: 2j28_9
Probab=56.65 E-value=31 Score=33.64 Aligned_cols=41 Identities=17% Similarity=0.179 Sum_probs=34.6
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhC-CcEEEEEeCCCchh
Q 011531 8 PHVVLLPYPLQGHIKPMMSLAELLGSA-NFQVTFVNTDHNHD 48 (483)
Q Consensus 8 ~~il~~~~~~~GH~~p~l~La~~L~~r-GH~V~~~~~~~~~~ 48 (483)
..|+++..++-|-..-...||..|+++ |++|.++..+.+..
T Consensus 101 ~vI~ivG~~GvGKTT~a~~LA~~l~~~~G~kVllvd~D~~r~ 142 (433)
T 2xxa_A 101 AVVLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYRP 142 (433)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHHHHTSCCCEEEEECCCSST
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHHhcCCeEEEEecCCCCc
Confidence 456666667889999999999999999 99999999876543
No 124
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=56.62 E-value=14 Score=32.50 Aligned_cols=40 Identities=18% Similarity=0.033 Sum_probs=36.0
Q ss_pred CCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCCC
Q 011531 6 VNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTDH 45 (483)
Q Consensus 6 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~ 45 (483)
.+++|++..-|+-|-..-++.+|..|+++|++|.++..+.
T Consensus 5 g~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~ 44 (228)
T 2r8r_A 5 GRLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVET 44 (228)
T ss_dssp CCEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred ceEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 3588899999999999999999999999999999888755
No 125
>1ys7_A Transcriptional regulatory protein PRRA; response regulator, DNA binding domain, phosphorylation; 1.58A {Mycobacterium tuberculosis} SCOP: a.4.6.1 c.23.1.1 PDB: 1ys6_A
Probab=56.51 E-value=93 Score=26.47 Aligned_cols=36 Identities=22% Similarity=0.344 Sum_probs=20.4
Q ss_pred CCCCCCCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEE
Q 011531 1 MERSHVNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTF 40 (483)
Q Consensus 1 ~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~ 40 (483)
|.+...++||+++- .|-.-...|...|...|++|..
T Consensus 1 M~~~~~~~~ilivd----d~~~~~~~l~~~L~~~g~~v~~ 36 (233)
T 1ys7_A 1 MDTGVTSPRVLVVD----DDSDVLASLERGLRLSGFEVAT 36 (233)
T ss_dssp ------CCEEEEEC----SCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCCCCeEEEEe----CCHHHHHHHHHHHHhCCCEEEE
Confidence 66666677887764 4555566677777777887763
No 126
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=56.34 E-value=83 Score=25.86 Aligned_cols=143 Identities=17% Similarity=0.109 Sum_probs=75.7
Q ss_pred eEEEEecCcccCCCHHHHHHHHHHHHhCCCeEEEEEcCCccCCCCCCCCCChhhhhhcCCCceeEEeccCHHHHhccCCc
Q 011531 293 SVLYVSFGSLVGLTREQMSELWHGLVNRGQRFLLVVRPDLILGEPGAAETPLAQNEGTEERNRFIVSWAPQEEVLAHPAV 372 (483)
Q Consensus 293 ~vi~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~ 372 (483)
|.|-|-+||.. +....+++...++.+|..+-..+ -+....|+.+.+-.. -+....+
T Consensus 6 p~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V--------~SaHRtp~~l~~~~~--------------~~~~~g~ 61 (166)
T 3oow_A 6 VQVGVIMGSKS--DWSTMKECCDILDNLGIGYECEV--------VSAHRTPDKMFDYAE--------------TAKERGL 61 (166)
T ss_dssp EEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEE--------CCTTTCHHHHHHHHH--------------HTTTTTC
T ss_pred CeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEE--------EcCcCCHHHHHHHHH--------------HHHhCCC
Confidence 44677777766 66667788888888888654433 122244444332110 0111223
Q ss_pred cceeeccCchhHHHHHH---hCCceeccccccch--hHHH--HHHHHhhccceec-C-C---CCCHHHHHHHHHHHHhHh
Q 011531 373 GGFLTHGGWNSTLEGIA---AGVPMICWPQFSDQ--LVNS--RCVSEVWKIGFDM-K-D---TCDGSIIEKLVRDLMENK 440 (483)
Q Consensus 373 ~~~ItHgG~gs~~eal~---~GvP~l~~P~~~DQ--~~na--~~v~~~~G~G~~l-~-~---~~~~~~l~~~i~~ll~~~ 440 (483)
+++|.=.|.-.-+-.+. .-+|+|.+|...-. ...+ -.++--.|+++.. . + .++...++..|..+ .|
T Consensus 62 ~ViIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dsLlS~vqmp~gvpVatV~I~~ag~~nAa~lAa~Il~~-~d- 139 (166)
T 3oow_A 62 KVIIAGAGGAAHLPGMVAAKTTLPVLGVPVKSSTLNGQDSLLSIVQMPAGIPVATFAIGMAGAKNAALFAASILQH-TD- 139 (166)
T ss_dssp CEEEEEECSSCCHHHHHHHTCSSCEEEEECCCTTTTTHHHHHHHHTCCTTSCCEECCSTHHHHHHHHHHHHHHHGG-GC-
T ss_pred cEEEEECCcchhhHHHHHhccCCCEEEeecCcCCCCCHHHHHHHhcCCCCCceEEEecCCccchHHHHHHHHHHcC-CC-
Confidence 45887777533332222 35799999985321 1122 1231112444331 1 2 23333333333332 25
Q ss_pred HHHHHHHHHHHHHHHHHHHhcC
Q 011531 441 REEIMGSTDRVATMARDAVNEG 462 (483)
Q Consensus 441 ~~~~~~~a~~l~~~~~~~~~~g 462 (483)
+.++++.+.+++.+++.+.+.
T Consensus 140 -~~l~~kl~~~r~~~~~~v~~~ 160 (166)
T 3oow_A 140 -INIAKALAEFRAEQTRFVLEN 160 (166)
T ss_dssp -HHHHHHHHHHHHHHHHHHHTC
T ss_pred -HHHHHHHHHHHHHHHHHHHhc
Confidence 889999999999988765443
No 127
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=55.75 E-value=38 Score=28.13 Aligned_cols=138 Identities=14% Similarity=0.052 Sum_probs=72.4
Q ss_pred eEEEEecCcccCCCHHHHHHHHHHHHhCCCeEEEEEcCCccCCCCCCCCCChhhhhhcCCCceeEEeccCHHHHhccCCc
Q 011531 293 SVLYVSFGSLVGLTREQMSELWHGLVNRGQRFLLVVRPDLILGEPGAAETPLAQNEGTEERNRFIVSWAPQEEVLAHPAV 372 (483)
Q Consensus 293 ~vi~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~ 372 (483)
+.|-|-+||.. +....+++...++..|.++=..+ -+....|+.+.+-.. . .....+
T Consensus 8 ~~V~IimgS~S--D~~v~~~a~~~L~~~gi~~ev~V--------~SaHR~p~~~~~~~~-----------~---a~~~g~ 63 (174)
T 3lp6_A 8 PRVGVIMGSDS--DWPVMADAAAALAEFDIPAEVRV--------VSAHRTPEAMFSYAR-----------G---AAARGL 63 (174)
T ss_dssp CSEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEE--------CCTTTCHHHHHHHHH-----------H---HHHHTC
T ss_pred CeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEE--------ECCCCCHHHHHHHHH-----------H---HHhCCC
Confidence 34667777766 56667788888888888754433 122244443332100 0 011122
Q ss_pred cceeeccCch----hHHHHHHhCCceeccccccc--hhHHH--HHHHHhhcccee---cCCCCCHHHHHHHHHHHHhHhH
Q 011531 373 GGFLTHGGWN----STLEGIAAGVPMICWPQFSD--QLVNS--RCVSEVWKIGFD---MKDTCDGSIIEKLVRDLMENKR 441 (483)
Q Consensus 373 ~~~ItHgG~g----s~~eal~~GvP~l~~P~~~D--Q~~na--~~v~~~~G~G~~---l~~~~~~~~l~~~i~~ll~~~~ 441 (483)
+++|.=.|.- ++..++ .-+|+|.+|...- +...+ -.++--.|+.+. ++...++..++..|..+- |
T Consensus 64 ~ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~daLlS~vqmp~GvpVatV~I~~~~nAa~lAa~Il~~~-d-- 139 (174)
T 3lp6_A 64 EVIIAGAGGAAHLPGMVAAA-TPLPVIGVPVPLGRLDGLDSLLSIVQMPAGVPVATVSIGGAGNAGLLAVRMLGAA-N-- 139 (174)
T ss_dssp CEEEEEEESSCCHHHHHHHH-CSSCEEEEEECCSSGGGHHHHHHHHCCCTTCCCEECCTTCHHHHHHHHHHHHHTT-C--
T ss_pred CEEEEecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhhCCCCCeeEEEEcCcchHHHHHHHHHHhCC-C--
Confidence 3377766643 333333 5579999998532 22222 123111243222 223344444444443332 4
Q ss_pred HHHHHHHHHHHHHHHHH
Q 011531 442 EEIMGSTDRVATMARDA 458 (483)
Q Consensus 442 ~~~~~~a~~l~~~~~~~ 458 (483)
+.++++.+.+++.+++.
T Consensus 140 ~~l~~kl~~~r~~~~~~ 156 (174)
T 3lp6_A 140 PQLRARIVAFQDRLADV 156 (174)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 78888888888888764
No 128
>1wrd_A TOM1, target of MYB protein 1; three-helix bundle, ubiquitin-binding protein, protein trans signaling protein complex; 1.75A {Homo sapiens} SCOP: a.7.8.1
Probab=54.94 E-value=15 Score=27.78 Aligned_cols=52 Identities=21% Similarity=0.219 Sum_probs=31.0
Q ss_pred CCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCCh---HHHHHHHHHHHHHhh
Q 011531 423 TCDGSIIEKLVRDLMENKREEIMGSTDRVATMARDAVNEGGSS---YRNLDGLIEDIRLMA 480 (483)
Q Consensus 423 ~~~~~~l~~~i~~ll~~~~~~~~~~a~~l~~~~~~~~~~gg~~---~~~~~~l~~~l~~~~ 480 (483)
.++++.+++...++ +..+.+++-|.+++..+ .+|+.. ...+.+|.+..+.+.
T Consensus 2 ~~~~eq~~k~~~el-----~~v~~n~~lL~EML~~~-~p~~~~~~~~el~~eL~~~c~~~q 56 (103)
T 1wrd_A 2 PLGSEQIGKLRSEL-----EMVSGNVRVMSEMLTEL-VPTQAEPADLELLQELNRTCRAMQ 56 (103)
T ss_dssp CSSSTTHHHHHHHH-----HHHHHHHHHHHHHHHHS-CTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH-----HHHHHHHHHHHHHHHhc-CCCCCCcccHHHHHHHHHHHHHHH
Confidence 35667777766666 66778888888887764 444422 123455555444443
No 129
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=53.85 E-value=8 Score=35.35 Aligned_cols=32 Identities=28% Similarity=0.354 Sum_probs=23.5
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeC
Q 011531 8 PHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNT 43 (483)
Q Consensus 8 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~ 43 (483)
|||++.. +.|-+= ..|+++|.++||+|+.++-
T Consensus 1 MkILVTG--atGfIG--~~L~~~L~~~G~~V~~l~R 32 (298)
T 4b4o_A 1 MRVLVGG--GTGFIG--TALTQLLNARGHEVTLVSR 32 (298)
T ss_dssp CEEEEET--TTSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CEEEEEC--CCCHHH--HHHHHHHHHCCCEEEEEEC
Confidence 6876653 334443 5689999999999999875
No 130
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=53.60 E-value=89 Score=25.61 Aligned_cols=136 Identities=15% Similarity=0.125 Sum_probs=72.3
Q ss_pred eEEEEecCcccCCCHHHHHHHHHHHHhCCCeEEEEEcCCccCCCCCCCCCChhhhhhcCCCceeEEeccCHHHHhccCCc
Q 011531 293 SVLYVSFGSLVGLTREQMSELWHGLVNRGQRFLLVVRPDLILGEPGAAETPLAQNEGTEERNRFIVSWAPQEEVLAHPAV 372 (483)
Q Consensus 293 ~vi~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~ 372 (483)
+.|-|-+||.. +....+++...++.+|..+=..+ -+...+|+.+.+-... .....+
T Consensus 4 ~~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V--------~SaHR~p~~~~~~~~~--------------a~~~g~ 59 (163)
T 3ors_A 4 MKVAVIMGSSS--DWKIMQESCNMLDYFEIPYEKQV--------VSAHRTPKMMVQFASE--------------ARERGI 59 (163)
T ss_dssp CCEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEE--------CCTTTSHHHHHHHHHH--------------TTTTTC
T ss_pred CeEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEE--------ECCcCCHHHHHHHHHH--------------HHhCCC
Confidence 33667777766 56667788888888888754433 1223444543321100 011223
Q ss_pred cceeeccCch----hHHHHHHhCCceeccccccch--hHHH--HHHHHhhccce--e---cC--CCCCHHHHHHHHHHHH
Q 011531 373 GGFLTHGGWN----STLEGIAAGVPMICWPQFSDQ--LVNS--RCVSEVWKIGF--D---MK--DTCDGSIIEKLVRDLM 437 (483)
Q Consensus 373 ~~~ItHgG~g----s~~eal~~GvP~l~~P~~~DQ--~~na--~~v~~~~G~G~--~---l~--~~~~~~~l~~~i~~ll 437 (483)
+++|.=.|.- ++.-++ .-+|+|.+|..... ...+ -.+ + .--|+ . ++ +..+...++..|..+-
T Consensus 60 ~ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~v-q-mp~GvPVatV~I~~a~~~nAa~lAa~Il~~~ 136 (163)
T 3ors_A 60 NIIIAGAGGAAHLPGMVASL-TTLPVIGVPIETKSLKGIDSLLSIV-Q-MPGGIPVATTAIGAAGAKNAGILAARMLSIQ 136 (163)
T ss_dssp CEEEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHH-T-CCTTSCCEECCSTHHHHHHHHHHHHHHHHTT
T ss_pred cEEEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHh-h-CCCCCceEEEEcCCcccHHHHHHHHHHHhCC
Confidence 3477766643 333333 55799999975431 1222 122 2 33332 2 22 2334444443333332
Q ss_pred hHhHHHHHHHHHHHHHHHHHH
Q 011531 438 ENKREEIMGSTDRVATMARDA 458 (483)
Q Consensus 438 ~~~~~~~~~~a~~l~~~~~~~ 458 (483)
| +.++++.+.+++.+++.
T Consensus 137 -d--~~l~~kl~~~r~~~~~~ 154 (163)
T 3ors_A 137 -N--PSLVEKLNQYESSLIQK 154 (163)
T ss_dssp -C--THHHHHHHHHHHHHHHH
T ss_pred -C--HHHHHHHHHHHHHHHHH
Confidence 4 78899999888888764
No 131
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=53.36 E-value=84 Score=25.99 Aligned_cols=139 Identities=14% Similarity=0.104 Sum_probs=73.3
Q ss_pred CCeEEEEecCcccCCCHHHHHHHHHHHHhCCCeEEEEEcCCccCCCCCCCCCChhhhhhcCCCceeEEeccCHHHHhccC
Q 011531 291 PKSVLYVSFGSLVGLTREQMSELWHGLVNRGQRFLLVVRPDLILGEPGAAETPLAQNEGTEERNRFIVSWAPQEEVLAHP 370 (483)
Q Consensus 291 ~~~vi~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~ 370 (483)
+.|.|-|-+||.+ +....+++...++.+|..+-..+ -+....|+.+.+-.. -...-
T Consensus 11 ~~P~V~IimGS~S--D~~v~~~a~~~l~~~gi~~ev~V--------~saHR~p~~l~~~~~--------------~a~~~ 66 (173)
T 4grd_A 11 SAPLVGVLMGSSS--DWDVMKHAVAILQEFGVPYEAKV--------VSAHRMPDEMFDYAE--------------KARER 66 (173)
T ss_dssp SSCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEE--------CCTTTSHHHHHHHHH--------------HHTTT
T ss_pred CCCeEEEEeCcHh--HHHHHHHHHHHHHHcCCCEEEEE--------EccccCHHHHHHHHH--------------HHHhc
Confidence 4566888888877 66677888888888888754434 122344554332100 00112
Q ss_pred CccceeeccCc----hhHHHHHHhCCceeccccccch--hHH--HHHHHHhhccceecC--C---CCCHHHHHHHHHHHH
Q 011531 371 AVGGFLTHGGW----NSTLEGIAAGVPMICWPQFSDQ--LVN--SRCVSEVWKIGFDMK--D---TCDGSIIEKLVRDLM 437 (483)
Q Consensus 371 ~~~~~ItHgG~----gs~~eal~~GvP~l~~P~~~DQ--~~n--a~~v~~~~G~G~~l~--~---~~~~~~l~~~i~~ll 437 (483)
.++++|.=.|. .++.-+ ..-+|+|.+|..... ... ...++--.|+.+..- + ..+..-++. ++|
T Consensus 67 g~~ViIa~AG~aahLpgvvA~-~t~~PVIgVPv~~~~l~G~dsLlSivqMP~Gvpvatv~i~~~~a~NAallA~---~IL 142 (173)
T 4grd_A 67 GLRAIIAGAGGAAHLPGMLAA-KTTVPVLGVPVASKYLKGVDSLHSIVQMPKGVPVATFAIGEAGAANAALFAV---SIL 142 (173)
T ss_dssp TCSEEEEEEESSCCHHHHHHH-HCCSCEEEEEECCTTTTTHHHHHHHHCCCTTSCCEECCSSHHHHHHHHHHHH---HHH
T ss_pred CCeEEEEeccccccchhhhee-cCCCCEEEEEcCCCCCCchhHHHHHHhCCCCCCceEEecCCcchHHHHHHHH---HHH
Confidence 23336655553 233333 446899999975431 112 123311124333211 1 222233333 344
Q ss_pred h--HhHHHHHHHHHHHHHHHHHHH
Q 011531 438 E--NKREEIMGSTDRVATMARDAV 459 (483)
Q Consensus 438 ~--~~~~~~~~~a~~l~~~~~~~~ 459 (483)
. + +.++++.+.++++.++.+
T Consensus 143 a~~d--~~l~~kl~~~r~~~~~~v 164 (173)
T 4grd_A 143 SGNS--VDYANRLAAFRVRQNEAA 164 (173)
T ss_dssp TTSC--HHHHHHHHHHHHHHHHHH
T ss_pred cCCC--HHHHHHHHHHHHHHHHHH
Confidence 4 5 889999999888887753
No 132
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=53.12 E-value=17 Score=30.95 Aligned_cols=44 Identities=18% Similarity=0.193 Sum_probs=34.6
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCCCchhhhhh
Q 011531 8 PHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTDHNHDLLLR 52 (483)
Q Consensus 8 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~~~~~~~~ 52 (483)
+||++...|+.|- +-...+.++|.++|++|.++.++.-...+..
T Consensus 2 k~IllgvTGs~aa-~k~~~l~~~L~~~g~~V~vv~T~~A~~~i~~ 45 (189)
T 2ejb_A 2 QKIALCITGASGV-IYGIKLLQVLEELDFSVDLVISRNAKVVLKE 45 (189)
T ss_dssp CEEEEEECSSTTH-HHHHHHHHHHHHTTCEEEEEECHHHHHHHHH
T ss_pred CEEEEEEECHHHH-HHHHHHHHHHHHCCCEEEEEEChhHHHHhhH
Confidence 4788888888784 4689999999999999999999554444433
No 133
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=52.23 E-value=13 Score=33.78 Aligned_cols=50 Identities=16% Similarity=0.104 Sum_probs=34.6
Q ss_pred cceeeccCchhHHHHHHh------CCceeccccccchhHHHHHHHHhhccceecCCCCCHHHHHHHHHHHHh
Q 011531 373 GGFLTHGGWNSTLEGIAA------GVPMICWPQFSDQLVNSRCVSEVWKIGFDMKDTCDGSIIEKLVRDLME 438 (483)
Q Consensus 373 ~~~ItHgG~gs~~eal~~------GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~~i~~ll~ 438 (483)
+++|.=||=||+.+++.. ++|++.+|.. .+|. + ..+.++.+.+++.++++
T Consensus 37 D~vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~G------------~lgf---l-~~~~~~~~~~~l~~l~~ 92 (272)
T 2i2c_A 37 EIVISIGGDGTFLSAFHQYEERLDEIAFIGIHTG------------HLGF---Y-ADWRPAEADKLVKLLAK 92 (272)
T ss_dssp SEEEEEESHHHHHHHHHHTGGGTTTCEEEEEESS------------SCCS---S-CCBCGGGHHHHHHHHHT
T ss_pred CEEEEEcCcHHHHHHHHHHhhcCCCCCEEEEeCC------------CCCc---C-CcCCHHHHHHHHHHHHc
Confidence 349999999999999875 8899998861 0111 1 23446667777777665
No 134
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=52.15 E-value=1e+02 Score=28.40 Aligned_cols=36 Identities=19% Similarity=0.135 Sum_probs=26.8
Q ss_pred CCCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCCC
Q 011531 5 HVNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTDH 45 (483)
Q Consensus 5 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~ 45 (483)
.+-|||+|+..+..+ ...-+.|.++||+|..+.+.+
T Consensus 2 ~~mmrIvf~Gtp~fa-----~~~L~~L~~~~~~v~~Vvt~p 37 (317)
T 3rfo_A 2 NAMIKVVFMGTPDFS-----VPVLRRLIEDGYDVIGVVTQP 37 (317)
T ss_dssp CTTSEEEEECCSTTH-----HHHHHHHHHTTCEEEEEECCC
T ss_pred CCceEEEEEeCCHHH-----HHHHHHHHHCCCcEEEEEeCC
Confidence 345899999888654 345677888899998877643
No 135
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=52.08 E-value=18 Score=31.75 Aligned_cols=29 Identities=17% Similarity=0.228 Sum_probs=23.9
Q ss_pred ccceeeccCchhHHHHHHhCCceecccccc
Q 011531 372 VGGFLTHGGWNSTLEGIAAGVPMICWPQFS 401 (483)
Q Consensus 372 ~~~~ItHgG~gs~~eal~~GvP~l~~P~~~ 401 (483)
++++|+.||.+.....- ..+|+|-++..+
T Consensus 64 ~dVIISRGgta~~Lr~~-~~iPVV~I~vs~ 92 (225)
T 2pju_A 64 CDAIIAAGSNGAYLKSR-LSVPVILIKPSG 92 (225)
T ss_dssp CSEEEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CeEEEeCChHHHHHHhh-CCCCEEEecCCH
Confidence 45599999999888875 579999999843
No 136
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=50.54 E-value=26 Score=30.86 Aligned_cols=23 Identities=26% Similarity=0.294 Sum_probs=20.0
Q ss_pred HHHHHHHHHHhCCcEEEEEeCCC
Q 011531 23 PMMSLAELLGSANFQVTFVNTDH 45 (483)
Q Consensus 23 p~l~La~~L~~rGH~V~~~~~~~ 45 (483)
.-.+||++|+++|++|++++.+.
T Consensus 31 mG~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 31 LGKIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp HHHHHHHHHHHTTCEEEEEECTT
T ss_pred HHHHHHHHHHHCCCEEEEEeCCc
Confidence 45788999999999999999853
No 137
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=50.50 E-value=79 Score=26.08 Aligned_cols=139 Identities=17% Similarity=0.180 Sum_probs=71.9
Q ss_pred eEEEEecCcccCCCHHHHHHHHHHHHhCCCeEEEEEcCCccCCCCCCCCCChhhhhhcCCCceeEEeccCHHHHhccCCc
Q 011531 293 SVLYVSFGSLVGLTREQMSELWHGLVNRGQRFLLVVRPDLILGEPGAAETPLAQNEGTEERNRFIVSWAPQEEVLAHPAV 372 (483)
Q Consensus 293 ~vi~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~ 372 (483)
|.|-|-+||.. +....+++...++.+|..+-..+ -+....|+.+.+-... ...-.+
T Consensus 7 ~~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V--------~SaHR~p~~~~~~~~~--------------a~~~g~ 62 (169)
T 3trh_A 7 IFVAILMGSDS--DLSTMETAFTELKSLGIPFEAHI--------LSAHRTPKETVEFVEN--------------ADNRGC 62 (169)
T ss_dssp CEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEE--------CCTTTSHHHHHHHHHH--------------HHHTTE
T ss_pred CcEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEE--------EcccCCHHHHHHHHHH--------------HHhCCC
Confidence 44777778766 56667788888888888764444 1222444433321100 011223
Q ss_pred cceeeccCchhHHHHHH---hCCceeccccccch--hHHHH-HHHH-hhcccee---cC--CCCCHHHHHHHHHHHHhHh
Q 011531 373 GGFLTHGGWNSTLEGIA---AGVPMICWPQFSDQ--LVNSR-CVSE-VWKIGFD---MK--DTCDGSIIEKLVRDLMENK 440 (483)
Q Consensus 373 ~~~ItHgG~gs~~eal~---~GvP~l~~P~~~DQ--~~na~-~v~~-~~G~G~~---l~--~~~~~~~l~~~i~~ll~~~ 440 (483)
+++|.=.|.-.-+-.+. .-+|+|.+|...-. ...+- -.++ --|+.+. ++ +.++...++..|..+ .|
T Consensus 63 ~ViIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dsLlS~vqmp~GvPVatV~I~~a~~~nAa~lAa~Il~~-~d- 140 (169)
T 3trh_A 63 AVFIAAAGLAAHLAGTIAAHTLKPVIGVPMAGGSLGGLDALLSTVQMPGGVPVACTAIGKAGAKNAAILAAQIIAL-QD- 140 (169)
T ss_dssp EEEEEEECSSCCHHHHHHHTCSSCEEEEECCCSTTTTHHHHHHHHCCCTTSCCEECCSTHHHHHHHHHHHHHHHHT-TC-
T ss_pred cEEEEECChhhhhHHHHHhcCCCCEEEeecCCCCCCCHHHHHHhhcCCCCCceEEEecCCccchHHHHHHHHHHcC-CC-
Confidence 44777766533332222 34699999985321 22221 1112 1243222 22 122333333333322 25
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 011531 441 REEIMGSTDRVATMARDA 458 (483)
Q Consensus 441 ~~~~~~~a~~l~~~~~~~ 458 (483)
+.++++.+.+++.+++.
T Consensus 141 -~~l~~kl~~~r~~~~~~ 157 (169)
T 3trh_A 141 -KSIAQKLVQQRTAKRET 157 (169)
T ss_dssp -HHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHH
Confidence 88999999988888764
No 138
>2qv5_A AGR_C_5032P, uncharacterized protein ATU2773; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Agrobacterium tumefaciens str}
Probab=50.25 E-value=75 Score=28.44 Aligned_cols=40 Identities=8% Similarity=0.110 Sum_probs=32.7
Q ss_pred hHHHHHHHHHhhhhhcCCCCccEEEEcCCC---CcchHHHHHHcCCCeEEE
Q 011531 98 KPAFRDLLISLREETEQRQSPTCVIADGIL---CFLTLDVSEELQIPLLAL 145 (483)
Q Consensus 98 ~~~~~~ll~~~~~~~~~~~~~D~VI~D~~~---~~~~~~~A~~lgIP~v~~ 145 (483)
...+..+++.+++ -.+++.|..+ +. +..+|.++|+|++.-
T Consensus 141 ~~~M~~vm~~L~~-------~gL~FlDS~Ts~~S~-a~~~A~~~gvp~~~r 183 (261)
T 2qv5_A 141 QSALEPVMRDIGK-------RGLLFLDDGSSAQSL-SGGIAKAISAPQGFA 183 (261)
T ss_dssp HHHHHHHHHHHHH-------TTCEEEECSCCTTCC-HHHHHHHHTCCEEEC
T ss_pred HHHHHHHHHHHHH-------CCCEEEcCCCCcccH-HHHHHHHcCCCeEEe
Confidence 4567788888874 5899999998 45 788999999999983
No 139
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=50.25 E-value=1.1e+02 Score=25.38 Aligned_cols=142 Identities=18% Similarity=0.168 Sum_probs=74.4
Q ss_pred EEEEecCcccCCCHHHHHHHHHHHHhCCCeEEEEEcCCccCCCCCCCCCChhhhhhcCCCceeEEeccCHHHHhccCCcc
Q 011531 294 VLYVSFGSLVGLTREQMSELWHGLVNRGQRFLLVVRPDLILGEPGAAETPLAQNEGTEERNRFIVSWAPQEEVLAHPAVG 373 (483)
Q Consensus 294 vi~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~ 373 (483)
.|-|-+||.. +....+++...++.+|..+-..+ -+....|+.+.+-... ...-.++
T Consensus 14 ~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~ev~V--------~SaHR~p~~~~~~~~~--------------a~~~g~~ 69 (174)
T 3kuu_A 14 KIAIVMGSKS--DWATMQFAADVLTTLNVPFHVEV--------VSAHRTPDRLFSFAEQ--------------AEANGLH 69 (174)
T ss_dssp CEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEE--------CCTTTCHHHHHHHHHH--------------TTTTTCS
T ss_pred cEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEE--------EcccCCHHHHHHHHHH--------------HHhCCCc
Confidence 3667777766 66667788888888888764444 1223445544321100 0112233
Q ss_pred ceeeccCchhHHHHHH---hCCceeccccccc--hhHHH-HHHHH-hhcccee---cC--CCCCHHHHHHHHHHHHhHhH
Q 011531 374 GFLTHGGWNSTLEGIA---AGVPMICWPQFSD--QLVNS-RCVSE-VWKIGFD---MK--DTCDGSIIEKLVRDLMENKR 441 (483)
Q Consensus 374 ~~ItHgG~gs~~eal~---~GvP~l~~P~~~D--Q~~na-~~v~~-~~G~G~~---l~--~~~~~~~l~~~i~~ll~~~~ 441 (483)
++|.=.|.-.-+-.+. .-+|+|.+|...- +...+ .-.++ -.|+.+. ++ ...+...++..|..+ .|
T Consensus 70 ViIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dsLlS~vqmP~GvPVatV~I~~a~~~nAa~lAa~ILa~-~d-- 146 (174)
T 3kuu_A 70 VIIAGNGGAAHLPGMLAAKTLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLAIGKAGAANAALLAAQILAL-HD-- 146 (174)
T ss_dssp EEEEEEESSCCHHHHHHHTCSSCEEEEEECCTTTTTHHHHHHHHTCCTTSCCEECCSSHHHHHHHHHHHHHHHHT-TC--
T ss_pred EEEEECChhhhhHHHHHhccCCCEEEeeCCCCCCCCHHHHHHhhhCCCCCeeEEEEeCCccchHHHHHHHHHHcC-CC--
Confidence 4777766533222222 3469999998532 12222 11212 1243222 22 123334444333332 25
Q ss_pred HHHHHHHHHHHHHHHHHHhcC
Q 011531 442 EEIMGSTDRVATMARDAVNEG 462 (483)
Q Consensus 442 ~~~~~~a~~l~~~~~~~~~~g 462 (483)
+.++++.+.+++.+++.+.+.
T Consensus 147 ~~l~~kl~~~r~~~~~~v~~~ 167 (174)
T 3kuu_A 147 TELAGRLAHWRQSQTDDVLDN 167 (174)
T ss_dssp HHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHhC
Confidence 889999999999988765444
No 140
>2nly_A BH1492 protein, divergent polysaccharide deacetylase hypothetical; PFAM04748, structural PSI, protein structure initiative; 2.50A {Bacillus halodurans} SCOP: c.6.2.7
Probab=49.78 E-value=1.1e+02 Score=26.92 Aligned_cols=39 Identities=23% Similarity=0.394 Sum_probs=31.4
Q ss_pred hHHHHHHHHHhhhhhcCCCCccEEEEcCCC---CcchHHHHHHcCCCeEE
Q 011531 98 KPAFRDLLISLREETEQRQSPTCVIADGIL---CFLTLDVSEELQIPLLA 144 (483)
Q Consensus 98 ~~~~~~ll~~~~~~~~~~~~~D~VI~D~~~---~~~~~~~A~~lgIP~v~ 144 (483)
...+..+++.+++ -.+.+.|..+ +. +..+|...|+|++.
T Consensus 114 ~~~m~~vm~~l~~-------~gL~fvDS~Ts~~S~-a~~~A~~~gvp~~~ 155 (245)
T 2nly_A 114 EKIMRAILEVVKE-------KNAFIIDSGTSPHSL-IPQLAEELEVPYAT 155 (245)
T ss_dssp HHHHHHHHHHHHH-------TTCEEEECCCCSSCS-HHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHHH-------CCCEEEcCCCCcccH-HHHHHHHcCCCeEE
Confidence 4566778888763 5799999985 35 78899999999998
No 141
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=49.47 E-value=13 Score=29.05 Aligned_cols=33 Identities=15% Similarity=0.353 Sum_probs=24.8
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCC
Q 011531 7 NPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTD 44 (483)
Q Consensus 7 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~ 44 (483)
.|||+++.. |.+ -..+++.|.++||+|+++...
T Consensus 4 ~m~i~IiG~---G~i--G~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAGI---GRV--GYTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp -CEEEEECC---SHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECC---CHH--HHHHHHHHHhCCCeEEEEECC
Confidence 588988843 544 346789999999999988763
No 142
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=49.23 E-value=52 Score=28.73 Aligned_cols=41 Identities=17% Similarity=0.309 Sum_probs=33.2
Q ss_pred hHHHHHHHHHhhhhhcCCCCccEEEEcCCCCcchHHHHHHcCCCeEEEec
Q 011531 98 KPAFRDLLISLREETEQRQSPTCVIADGILCFLTLDVSEELQIPLLALRT 147 (483)
Q Consensus 98 ~~~~~~ll~~~~~~~~~~~~~D~VI~D~~~~~~~~~~A~~lgIP~v~~~~ 147 (483)
.......++++++ .+.|+||.|.. ....|+++|+|.+.+.+
T Consensus 140 ~ee~~~~i~~l~~-----~G~~vVVG~~~----~~~~A~~~Gl~~vlI~s 180 (225)
T 2pju_A 140 EEDARGQINELKA-----NGTEAVVGAGL----ITDLAEEAGMTGIFIYS 180 (225)
T ss_dssp HHHHHHHHHHHHH-----TTCCEEEESHH----HHHHHHHTTSEEEESSC
T ss_pred HHHHHHHHHHHHH-----CCCCEEECCHH----HHHHHHHcCCcEEEECC
Confidence 4566778888776 68999999843 68899999999999874
No 143
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=49.12 E-value=37 Score=33.61 Aligned_cols=27 Identities=19% Similarity=0.322 Sum_probs=22.0
Q ss_pred CCccEEEEcCCCCcchHHHHHHcCCCeEEEe
Q 011531 116 QSPTCVIADGILCFLTLDVSEELQIPLLALR 146 (483)
Q Consensus 116 ~~~D~VI~D~~~~~~~~~~A~~lgIP~v~~~ 146 (483)
.+||++|... . +..+|+++|||++.+.
T Consensus 400 ~~pDL~ig~~---~-~~~~a~k~gIP~~~~~ 426 (483)
T 3pdi_A 400 YQADILIAGG---R-NMYTALKGRVPFLDIN 426 (483)
T ss_dssp TTCSEEECCG---G-GHHHHHHTTCCBCCCC
T ss_pred cCCCEEEECC---c-hhHHHHHcCCCEEEec
Confidence 5799999873 3 6788999999998753
No 144
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=48.89 E-value=1.3e+02 Score=25.89 Aligned_cols=104 Identities=11% Similarity=0.130 Sum_probs=56.2
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCc--EEEEEeCCC-chh--hhhhccccccccCCCCCeEEEeCCC-CCCCCccc
Q 011531 8 PHVVLLPYPLQGHIKPMMSLAELLGSANF--QVTFVNTDH-NHD--LLLRNTDITSFCNRFPNFQFRSIPS-GLPANVIR 81 (483)
Q Consensus 8 ~~il~~~~~~~GH~~p~l~La~~L~~rGH--~V~~~~~~~-~~~--~~~~~~~~~~~~~~~~~v~f~~~p~-~l~~~~~~ 81 (483)
+||+|+..|+.+ -+.++.+.|.+.+| +|..+.+.. ... ..++.. ++.+..++. .+
T Consensus 2 ~rI~vl~SG~g~---~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A~~~----------gIp~~~~~~~~~------ 62 (216)
T 2ywr_A 2 LKIGVLVSGRGS---NLQAIIDAIESGKVNASIELVISDNPKAYAIERCKKH----------NVECKVIQRKEF------ 62 (216)
T ss_dssp EEEEEEECSCCH---HHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHHHHH----------TCCEEECCGGGS------
T ss_pred CEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHHHHc----------CCCEEEeCcccc------
Confidence 489988777643 46677788888888 766554432 221 222222 355554431 11
Q ss_pred CCCCHHHHHHHHHHhchHHHHHHHHHhhhhhcCCCCccEEEEcCCCCcchHHHHHHcCCCeEEEecc
Q 011531 82 SGLTAKDVFDAMKAVSKPAFRDLLISLREETEQRQSPTCVIADGILCFLTLDVSEELQIPLLALRTH 148 (483)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~D~VI~D~~~~~~~~~~A~~lgIP~v~~~~~ 148 (483)
.+ ...+.+.+.+.+++ .++|+||+-.+..-+...+-+.....++-++++
T Consensus 63 --~~--------r~~~~~~~~~~l~~--------~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 111 (216)
T 2ywr_A 63 --PS--------KKEFEERMALELKK--------KGVELVVLAGFMRILSHNFLKYFPNKVINIHPS 111 (216)
T ss_dssp --SS--------HHHHHHHHHHHHHH--------TTCCEEEESSCCSCCCHHHHTTSTTCEEEEESS
T ss_pred --cc--------hhhhhHHHHHHHHh--------cCCCEEEEeCchhhCCHHHHhhccCCeEEEcCC
Confidence 11 11122333444444 579999998764322444555555566766553
No 145
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=48.88 E-value=17 Score=31.40 Aligned_cols=42 Identities=17% Similarity=0.091 Sum_probs=31.7
Q ss_pred CCCCEEEEEcCCCCCCHHHHHHHHHHHHh-CCcEEEEEeCCCch
Q 011531 5 HVNPHVVLLPYPLQGHIKPMMSLAELLGS-ANFQVTFVNTDHNH 47 (483)
Q Consensus 5 ~~~~~il~~~~~~~GH~~p~l~La~~L~~-rGH~V~~~~~~~~~ 47 (483)
.++.||++...|+.+ .+-...+.++|.+ +|++|.++.++...
T Consensus 17 l~~k~IllgvTGsia-a~k~~~lv~~L~~~~g~~V~vv~T~~A~ 59 (206)
T 1qzu_A 17 ERKFHVLVGVTGSVA-ALKLPLLVSKLLDIPGLEVAVVTTERAK 59 (206)
T ss_dssp CSSEEEEEEECSSGG-GGTHHHHHHHHC---CEEEEEEECTGGG
T ss_pred cCCCEEEEEEeChHH-HHHHHHHHHHHhcccCCEEEEEECHhHH
Confidence 345788888888866 4456999999999 89999999996443
No 146
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: YES; 1.60A {Streptomyces avermitilis}
Probab=48.53 E-value=20 Score=31.53 Aligned_cols=41 Identities=20% Similarity=0.262 Sum_probs=30.1
Q ss_pred HHHHHHHHHhhhhhcCCCCccEEEEcCCCC------cchHHHHHHcCCCeEEE
Q 011531 99 PAFRDLLISLREETEQRQSPTCVIADGILC------FLTLDVSEELQIPLLAL 145 (483)
Q Consensus 99 ~~~~~ll~~~~~~~~~~~~~D~VI~D~~~~------~~~~~~A~~lgIP~v~~ 145 (483)
+.+.+.++++. .+||+|++|.... +.|..+.-.+++|+|.+
T Consensus 95 P~ll~al~~L~------~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGV 141 (237)
T 3goc_A 95 PTVLAALDALP------CPPGLIVCDGYGVAHPRRFGLASHLGVLTGLPTIGV 141 (237)
T ss_dssp HHHHHHHHTSS------SCCSEEEEESCSSCSTTSCCHHHHHHHHHCSCEEEE
T ss_pred HHHHHHHHhcC------CCCCEEEEeCceeecCCCcchhheeeeecCCCEEee
Confidence 44555666665 5799999998754 33566777889999997
No 147
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=47.80 E-value=99 Score=26.71 Aligned_cols=103 Identities=10% Similarity=0.111 Sum_probs=57.6
Q ss_pred CCCCCEEEEEcCCCCCCHHHHHHHHHHHHhC--CcEEEEEeCCC-chhh--hhhccccccccCCCCCeEEEeCCC-CCCC
Q 011531 4 SHVNPHVVLLPYPLQGHIKPMMSLAELLGSA--NFQVTFVNTDH-NHDL--LLRNTDITSFCNRFPNFQFRSIPS-GLPA 77 (483)
Q Consensus 4 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~r--GH~V~~~~~~~-~~~~--~~~~~~~~~~~~~~~~v~f~~~p~-~l~~ 77 (483)
+.+++||+++..++.+- +.+|.+.+.+. +++|..+.+.. .... .++.. ++.+..++. .+.
T Consensus 5 ~~~~~ri~vl~SG~gsn---l~all~~~~~~~~~~~I~~Vis~~~~a~~l~~A~~~----------gIp~~~~~~~~~~- 70 (215)
T 3kcq_A 5 MKKELRVGVLISGRGSN---LEALAKAFSTEESSVVISCVISNNAEARGLLIAQSY----------GIPTFVVKRKPLD- 70 (215)
T ss_dssp --CCEEEEEEESSCCHH---HHHHHHHTCCC-CSEEEEEEEESCTTCTHHHHHHHT----------TCCEEECCBTTBC-
T ss_pred CCCCCEEEEEEECCcHH---HHHHHHHHHcCCCCcEEEEEEeCCcchHHHHHHHHc----------CCCEEEeCcccCC-
Confidence 34577998888877443 45566666554 37888776532 2222 22222 366655542 110
Q ss_pred CcccCCCCHHHHHHHHHHhchHHHHHHHHHhhhhhcCCCCccEEEEcCCCCcchHHHHHHcCCCeEEEecc
Q 011531 78 NVIRSGLTAKDVFDAMKAVSKPAFRDLLISLREETEQRQSPTCVIADGILCFLTLDVSEELQIPLLALRTH 148 (483)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~D~VI~D~~~~~~~~~~A~~lgIP~v~~~~~ 148 (483)
.+.+.+.+++ .+||+||+-.+.......+-+...-.++-++++
T Consensus 71 --------------------~~~~~~~L~~--------~~~Dlivlagy~~IL~~~~l~~~~~~~iNiHpS 113 (215)
T 3kcq_A 71 --------------------IEHISTVLRE--------HDVDLVCLAGFMSILPEKFVTDWHHKIINIHPS 113 (215)
T ss_dssp --------------------HHHHHHHHHH--------TTCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred --------------------hHHHHHHHHH--------hCCCEEEEeCCceEeCHHHHhhccCCeEEECcc
Confidence 0233444444 579999998775432556666666677777553
No 148
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=46.49 E-value=1e+02 Score=26.68 Aligned_cols=106 Identities=8% Similarity=0.140 Sum_probs=57.9
Q ss_pred CCCEEEEEcCCCCCCHHHHHHHHHHHHh-CCcEEEEEeCCC-chh--hhhhccccccccCCCCCeEEEeCCC-CCCCCcc
Q 011531 6 VNPHVVLLPYPLQGHIKPMMSLAELLGS-ANFQVTFVNTDH-NHD--LLLRNTDITSFCNRFPNFQFRSIPS-GLPANVI 80 (483)
Q Consensus 6 ~~~~il~~~~~~~GH~~p~l~La~~L~~-rGH~V~~~~~~~-~~~--~~~~~~~~~~~~~~~~~v~f~~~p~-~l~~~~~ 80 (483)
+++||+++..+..+-+ .+|.+...+ .+++|..+.+.. ... ..++.. ++.+..++. .++.
T Consensus 4 ~~~riavl~SG~Gsnl---~all~~~~~~~~~eI~~Vis~~~~a~~~~~A~~~----------gIp~~~~~~~~~~~--- 67 (215)
T 3tqr_A 4 EPLPIVVLISGNGTNL---QAIIGAIQKGLAIEIRAVISNRADAYGLKRAQQA----------DIPTHIIPHEEFPS--- 67 (215)
T ss_dssp CCEEEEEEESSCCHHH---HHHHHHHHTTCSEEEEEEEESCTTCHHHHHHHHT----------TCCEEECCGGGSSS---
T ss_pred CCcEEEEEEeCCcHHH---HHHHHHHHcCCCCEEEEEEeCCcchHHHHHHHHc----------CCCEEEeCccccCc---
Confidence 4679998888775444 344444444 368888776532 221 122222 466665541 1110
Q ss_pred cCCCCHHHHHHHHHHhchHHHHHHHHHhhhhhcCCCCccEEEEcCCCCcchHHHHHHcCCCeEEEecc
Q 011531 81 RSGLTAKDVFDAMKAVSKPAFRDLLISLREETEQRQSPTCVIADGILCFLTLDVSEELQIPLLALRTH 148 (483)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~D~VI~D~~~~~~~~~~A~~lgIP~v~~~~~ 148 (483)
...+.+.+.+.+++ .++|+||+-.+.......+-+...-.++-+.++
T Consensus 68 -------------r~~~d~~~~~~l~~--------~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 114 (215)
T 3tqr_A 68 -------------RTDFESTLQKTIDH--------YDPKLIVLAGFMRKLGKAFVSHYSGRMINIHPS 114 (215)
T ss_dssp -------------HHHHHHHHHHHHHT--------TCCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred -------------hhHhHHHHHHHHHh--------cCCCEEEEccchhhCCHHHHhhccCCeEEeCcc
Confidence 01112333344444 579999998775432556666666667777553
No 149
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=46.17 E-value=20 Score=28.91 Aligned_cols=45 Identities=16% Similarity=0.154 Sum_probs=32.1
Q ss_pred CCCEEEEEcC-C-CCCCHHHHHHHHHHHHhCCcEEEEEeCCCchhhh
Q 011531 6 VNPHVVLLPY-P-LQGHIKPMMSLAELLGSANFQVTFVNTDHNHDLL 50 (483)
Q Consensus 6 ~~~~il~~~~-~-~~GH~~p~l~La~~L~~rGH~V~~~~~~~~~~~~ 50 (483)
.-||++++-. | ....+--.+-++..|.++||+|++.+++...+-+
T Consensus 5 ~~m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~npAAlkLl 51 (157)
T 1kjn_A 5 STGKALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANPAALRLV 51 (157)
T ss_dssp -CCEEEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECHHHHHHH
T ss_pred cceeeeEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCHHHHhhe
Confidence 3577766544 4 4455556788999999999999999996544333
No 150
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=45.56 E-value=25 Score=27.84 Aligned_cols=38 Identities=5% Similarity=0.042 Sum_probs=28.5
Q ss_pred CCEEEEEcC-C--CCCCHHHHHHHHHHHHhCCcEEEEEeCC
Q 011531 7 NPHVVLLPY-P--LQGHIKPMMSLAELLGSANFQVTFVNTD 44 (483)
Q Consensus 7 ~~~il~~~~-~--~~GH~~p~l~La~~L~~rGH~V~~~~~~ 44 (483)
..|++|+.. + +.......+.+|...++.||+|+++-+.
T Consensus 15 ~~kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~~ 55 (134)
T 3mc3_A 15 XXXILIVVTHGPEDLDRTYAPLFMASISASMEYETSVFFMI 55 (134)
T ss_dssp CCEEEEEECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred cceEEEEEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEe
Confidence 356655444 4 4567778888999999999999988774
No 151
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=44.92 E-value=26 Score=35.52 Aligned_cols=48 Identities=15% Similarity=0.117 Sum_probs=41.1
Q ss_pred CCCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCCCchhhhhh
Q 011531 5 HVNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTDHNHDLLLR 52 (483)
Q Consensus 5 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~~~~~~~~ 52 (483)
..+.+|++.+.++-.|-....-++..|..+|++|+.++...-.+.+..
T Consensus 96 ~~~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~vP~e~iv~ 143 (579)
T 3bul_A 96 KTNGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMVPAEKILR 143 (579)
T ss_dssp CCSCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSSBCHHHHHH
T ss_pred CCCCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHH
Confidence 347899999999999999999999999999999999987655555544
No 152
>3kl4_A SRP54, signal recognition 54 kDa protein; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Sulfolobus solfataricus} PDB: 1qzx_A 1qzw_A
Probab=44.73 E-value=33 Score=33.37 Aligned_cols=41 Identities=17% Similarity=0.168 Sum_probs=33.3
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCCCchh
Q 011531 8 PHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTDHNHD 48 (483)
Q Consensus 8 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~~~~ 48 (483)
.-|+++..++-|-..-...||..|+.+|++|.+++.+.+..
T Consensus 98 ~vI~lvG~~GsGKTTt~~kLA~~l~~~G~kVllv~~D~~r~ 138 (433)
T 3kl4_A 98 FIIMLVGVQGSGKTTTAGKLAYFYKKRGYKVGLVAADVYRP 138 (433)
T ss_dssp EEEEECCCTTSCHHHHHHHHHHHHHHTTCCEEEEEECCSCH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEecCccch
Confidence 34455555688999999999999999999999999765543
No 153
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=44.71 E-value=86 Score=27.09 Aligned_cols=108 Identities=12% Similarity=0.111 Sum_probs=56.4
Q ss_pred CCCCEEEEEcCCCCCCHHHHHHHHHHHHh-CCcEEEEEeCCCchhh--hhhccccccccCCCCCeEEEeCCCCCCCCccc
Q 011531 5 HVNPHVVLLPYPLQGHIKPMMSLAELLGS-ANFQVTFVNTDHNHDL--LLRNTDITSFCNRFPNFQFRSIPSGLPANVIR 81 (483)
Q Consensus 5 ~~~~~il~~~~~~~GH~~p~l~La~~L~~-rGH~V~~~~~~~~~~~--~~~~~~~~~~~~~~~~v~f~~~p~~l~~~~~~ 81 (483)
..++||+++..++.+-+. +|.+.+.. .+++|..+.+...... .++.. ++.+...+. .
T Consensus 10 ~~~~ri~vl~SG~gsnl~---all~~~~~~~~~eI~~Vis~~~a~~~~~A~~~----------gIp~~~~~~--~----- 69 (215)
T 3da8_A 10 SAPARLVVLASGTGSLLR---SLLDAAVGDYPARVVAVGVDRECRAAEIAAEA----------SVPVFTVRL--A----- 69 (215)
T ss_dssp CSSEEEEEEESSCCHHHH---HHHHHSSTTCSEEEEEEEESSCCHHHHHHHHT----------TCCEEECCG--G-----
T ss_pred CCCcEEEEEEeCChHHHH---HHHHHHhccCCCeEEEEEeCCchHHHHHHHHc----------CCCEEEeCc--c-----
Confidence 346799999888754443 44444433 3568877765443222 22222 355555431 0
Q ss_pred CCCCHHHHHHHHHHhchHHHHHHHHHhhhhhcCCCCccEEEEcCCCCcchHHHHHHcCCCeEEEecc
Q 011531 82 SGLTAKDVFDAMKAVSKPAFRDLLISLREETEQRQSPTCVIADGILCFLTLDVSEELQIPLLALRTH 148 (483)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~D~VI~D~~~~~~~~~~A~~lgIP~v~~~~~ 148 (483)
...+ +..+.+.+.+.+++ .++|+|++-.+.......+-+.+.-.++-++++
T Consensus 70 ~~~~--------r~~~d~~~~~~l~~--------~~~Dlivlagy~~iL~~~~l~~~~~~~iNiHpS 120 (215)
T 3da8_A 70 DHPS--------RDAWDVAITAATAA--------HEPDLVVSAGFMRILGPQFLSRFYGRTLNTHPA 120 (215)
T ss_dssp GSSS--------HHHHHHHHHHHHHT--------TCCSEEEEEECCSCCCHHHHHHHTTTEEEEESS
T ss_pred cccc--------hhhhhHHHHHHHHh--------hCCCEEEEcCchhhCCHHHHhhccCCeEEeCcc
Confidence 0011 11122334444444 579999998765322555556666667776553
No 154
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=44.11 E-value=61 Score=29.64 Aligned_cols=82 Identities=12% Similarity=0.086 Sum_probs=47.5
Q ss_pred CeEEEEecCcccCCCHHHHHHHHHHHHhCCCeEEEEEcCCccCCCCCCCCCChhhhhhcCCCceeEEeccCHHHHhccCC
Q 011531 292 KSVLYVSFGSLVGLTREQMSELWHGLVNRGQRFLLVVRPDLILGEPGAAETPLAQNEGTEERNRFIVSWAPQEEVLAHPA 371 (483)
Q Consensus 292 ~~vi~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~ 371 (483)
+-.|+++--|......+.+..+...|+..+..+.+..... +.+..+. + .++....+
T Consensus 10 ~~~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~~-----------~~~a~~~-----------~--~~~~~~~d 65 (304)
T 3s40_A 10 KVLLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKE-----------QGDATKY-----------C--QEFASKVD 65 (304)
T ss_dssp SEEEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECCS-----------TTHHHHH-----------H--HHHTTTCS
T ss_pred EEEEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEccC-----------cchHHHH-----------H--HHhhcCCC
Confidence 3345555544333334556677788887777765554211 1111100 0 01111234
Q ss_pred ccceeeccCchhHHHHHH------hCCceecccc
Q 011531 372 VGGFLTHGGWNSTLEGIA------AGVPMICWPQ 399 (483)
Q Consensus 372 ~~~~ItHgG~gs~~eal~------~GvP~l~~P~ 399 (483)
.+|.-||-||+.|.+. .++|+-++|.
T Consensus 66 --~vv~~GGDGTl~~v~~~l~~~~~~~~l~iiP~ 97 (304)
T 3s40_A 66 --LIIVFGGDGTVFECTNGLAPLEIRPTLAIIPG 97 (304)
T ss_dssp --EEEEEECHHHHHHHHHHHTTCSSCCEEEEEEC
T ss_pred --EEEEEccchHHHHHHHHHhhCCCCCcEEEecC
Confidence 4999999999999865 5789999997
No 155
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=43.81 E-value=14 Score=31.64 Aligned_cols=31 Identities=13% Similarity=0.228 Sum_probs=25.2
Q ss_pred CCccceeeccCchhHHHHHHhCCceecccccc
Q 011531 370 PAVGGFLTHGGWNSTLEGIAAGVPMICWPQFS 401 (483)
Q Consensus 370 ~~~~~~ItHgG~gs~~eal~~GvP~l~~P~~~ 401 (483)
..++++|+.||.+...... ..+|+|-++..+
T Consensus 50 ~~~dVIISRGgta~~lr~~-~~iPVV~I~~s~ 80 (196)
T 2q5c_A 50 DEVDAIISRGATSDYIKKS-VSIPSISIKVTR 80 (196)
T ss_dssp TTCSEEEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CCCeEEEECChHHHHHHHh-CCCCEEEEcCCH
Confidence 4445599999999888875 579999999854
No 156
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=43.57 E-value=20 Score=30.25 Aligned_cols=39 Identities=8% Similarity=-0.025 Sum_probs=30.6
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCCCch
Q 011531 8 PHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTDHNH 47 (483)
Q Consensus 8 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~~~ 47 (483)
.||++.-.|+.|=+ -...+.++|+++|++|.++.++.-.
T Consensus 3 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~ 41 (181)
T 1g63_A 3 GKLLICATASINVI-NINHYIVELKQHFDEVNILFSPSSK 41 (181)
T ss_dssp CCEEEEECSCGGGG-GHHHHHHHHTTTSSCEEEEECGGGG
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchhHH
Confidence 36777777775544 6789999999999999999995443
No 157
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=43.53 E-value=23 Score=28.48 Aligned_cols=44 Identities=11% Similarity=0.110 Sum_probs=30.0
Q ss_pred CCCCCCCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCC
Q 011531 1 MERSHVNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTD 44 (483)
Q Consensus 1 ~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~ 44 (483)
|+.+..+.-.+++..+..-.+++.+.+|...++.|++|+++.+-
T Consensus 2 ~~~~m~~kl~II~~sg~~d~~~~a~~lA~~Aaa~g~eV~iF~t~ 45 (144)
T 2qs7_A 2 MAEEKKKKLSIIVFSGTIDKLMPVGILTSGAAASGYEVNLFFTF 45 (144)
T ss_dssp -----CCEEEEEECCCSHHHHHHHHHHHHHHHHTTCEEEEEECH
T ss_pred ccccccCCEEEEEEcCCHHHHHHHHHHHHHHHHcCCcEEEEEeh
Confidence 33333333334445566788889999999999999999999883
No 158
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=43.23 E-value=1.5e+02 Score=29.46 Aligned_cols=34 Identities=15% Similarity=0.176 Sum_probs=24.1
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCCC
Q 011531 7 NPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTDH 45 (483)
Q Consensus 7 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~ 45 (483)
..|++++ |+-.-.+.|++.|.+-|.+|+.+.+..
T Consensus 364 GKrvaI~-----gd~~~~~~la~fL~elGm~vv~v~~~~ 397 (523)
T 3u7q_B 364 GKRFALW-----GDPDFVMGLVKFLLELGCEPVHILCHN 397 (523)
T ss_dssp TCEEEEE-----CSHHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred CCEEEEE-----CCchHHHHHHHHHHHcCCEEEEEEeCC
Confidence 3677776 233456678888888999988887643
No 159
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=42.92 E-value=1.7e+02 Score=25.48 Aligned_cols=105 Identities=10% Similarity=0.072 Sum_probs=59.6
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhC--CcEEEEEeCCC-chh--hhhhccccccccCCCCCeEEEeCCC-CCCCCcc
Q 011531 7 NPHVVLLPYPLQGHIKPMMSLAELLGSA--NFQVTFVNTDH-NHD--LLLRNTDITSFCNRFPNFQFRSIPS-GLPANVI 80 (483)
Q Consensus 7 ~~~il~~~~~~~GH~~p~l~La~~L~~r--GH~V~~~~~~~-~~~--~~~~~~~~~~~~~~~~~v~f~~~p~-~l~~~~~ 80 (483)
.+||+|+..++.+ -+.++.+.|.+. +++|..+.+.. ... ..++.. ++.+..++. .+.
T Consensus 22 ~~rI~~l~SG~g~---~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~~~----------gIp~~~~~~~~~~---- 84 (229)
T 3auf_A 22 MIRIGVLISGSGT---NLQAILDGCREGRIPGRVAVVISDRADAYGLERARRA----------GVDALHMDPAAYP---- 84 (229)
T ss_dssp CEEEEEEESSCCH---HHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHHHT----------TCEEEECCGGGSS----
T ss_pred CcEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHHHc----------CCCEEEECccccc----
Confidence 4699999887743 366777888876 68876665432 221 222222 466665441 111
Q ss_pred cCCCCHHHHHHHHHHhchHHHHHHHHHhhhhhcCCCCccEEEEcCCCCcchHHHHHHcCCCeEEEecc
Q 011531 81 RSGLTAKDVFDAMKAVSKPAFRDLLISLREETEQRQSPTCVIADGILCFLTLDVSEELQIPLLALRTH 148 (483)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~D~VI~D~~~~~~~~~~A~~lgIP~v~~~~~ 148 (483)
+ ...+.+.+.+.++. .+||+||+-.+..-+...+-+.+...++-+.++
T Consensus 85 ----~--------r~~~~~~~~~~l~~--------~~~Dliv~agy~~IL~~~~l~~~~~~~iNiHpS 132 (229)
T 3auf_A 85 ----S--------RTAFDAALAERLQA--------YGVDLVCLAGYMRLVRGPMLTAFPNRILNIHPS 132 (229)
T ss_dssp ----S--------HHHHHHHHHHHHHH--------TTCSEEEESSCCSCCCHHHHHHSTTCEEEEESS
T ss_pred ----c--------hhhccHHHHHHHHh--------cCCCEEEEcChhHhCCHHHHhhccCCEEEEccC
Confidence 1 01122333444444 579999998774332555666666677776553
No 160
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=42.91 E-value=91 Score=30.84 Aligned_cols=26 Identities=12% Similarity=0.158 Sum_probs=21.8
Q ss_pred CCccEEEEcCCCCcchHHHHHHcCCCeEEE
Q 011531 116 QSPTCVIADGILCFLTLDVSEELQIPLLAL 145 (483)
Q Consensus 116 ~~~D~VI~D~~~~~~~~~~A~~lgIP~v~~ 145 (483)
.+||++|.. .. ...+|+++|||++.+
T Consensus 416 ~~pDL~ig~---~~-~~~ia~k~gIP~~~~ 441 (492)
T 3u7q_A 416 IKPDLIGSG---IK-EKFIFQKMGIPFREM 441 (492)
T ss_dssp HCCSEEEEC---HH-HHHHHHHTTCCEEES
T ss_pred cCCcEEEeC---cc-hhHHHHHcCCCEEec
Confidence 379999997 34 688999999999974
No 161
>3pg5_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 3.30A {Corynebacterium diphtheriae}
Probab=42.59 E-value=97 Score=29.07 Aligned_cols=39 Identities=13% Similarity=0.103 Sum_probs=30.5
Q ss_pred CEEEEEcC--CCCCCHHHHHHHHHHHHhCCcEEEEEeCCCc
Q 011531 8 PHVVLLPY--PLQGHIKPMMSLAELLGSANFQVTFVNTDHN 46 (483)
Q Consensus 8 ~~il~~~~--~~~GH~~p~l~La~~L~~rGH~V~~~~~~~~ 46 (483)
||++.+.. |+-|-..-...||..|+++|++|.++-.+..
T Consensus 1 MkvIav~s~KGGvGKTT~a~nLA~~LA~~G~rVLlID~D~q 41 (361)
T 3pg5_A 1 MRTISFFNNKGGVGKTTLSTNVAHYFALQGKRVLYVDCDPQ 41 (361)
T ss_dssp CEEEEBCCSSCCHHHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred CeEEEEEcCCCCCcHHHHHHHHHHHHHhCCCcEEEEEcCCC
Confidence 45544443 6778888999999999999999999976543
No 162
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=42.06 E-value=16 Score=33.89 Aligned_cols=38 Identities=16% Similarity=0.141 Sum_probs=29.4
Q ss_pred CE-EEEEcCCCCCCH--------------HHHHHHHHHHHhCCcEEEEEeCCC
Q 011531 8 PH-VVLLPYPLQGHI--------------KPMMSLAELLGSANFQVTFVNTDH 45 (483)
Q Consensus 8 ~~-il~~~~~~~GH~--------------~p~l~La~~L~~rGH~V~~~~~~~ 45 (483)
.| +++...|+.=.+ ..-.+||+++.++|++|++++.+.
T Consensus 37 k~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~ 89 (313)
T 1p9o_A 37 RRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRAR 89 (313)
T ss_dssp CCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred CeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCC
Confidence 45 777777775555 256789999999999999999754
No 163
>3ga2_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Bacillus subtilis}
Probab=41.52 E-value=26 Score=31.01 Aligned_cols=41 Identities=17% Similarity=0.186 Sum_probs=29.8
Q ss_pred HHHHHHHHHhhhhhcCCCCccEEEEcCCCC------cchHHHHHHcCCCeEEE
Q 011531 99 PAFRDLLISLREETEQRQSPTCVIADGILC------FLTLDVSEELQIPLLAL 145 (483)
Q Consensus 99 ~~~~~ll~~~~~~~~~~~~~D~VI~D~~~~------~~~~~~A~~lgIP~v~~ 145 (483)
+.+.+.++++. .+||+|++|.... ++|..+.-.+++|+|.+
T Consensus 97 P~ll~al~~L~------~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGV 143 (246)
T 3ga2_A 97 PLIIEAAKKLE------TEPDVFLFDGNGYLHYNHMGVATHAAFFLGKPTIGI 143 (246)
T ss_dssp HHHHHHHHHCS------SCCSCEEEEBCSSSSTTSCCHHHHHHHHHTSCEEEE
T ss_pred HHHHHHHHhcC------CCCCEEEEcCcEEecCCCcchhheeeeecCCCEEee
Confidence 44555666665 4799999997643 33566777889999997
No 164
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=40.93 E-value=13 Score=29.37 Aligned_cols=33 Identities=15% Similarity=0.109 Sum_probs=25.4
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCC
Q 011531 7 NPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTD 44 (483)
Q Consensus 7 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~ 44 (483)
..|++++.. |. --..+++.|.++||+|+++...
T Consensus 6 ~~~v~I~G~---G~--iG~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 6 RYEYIVIGS---EA--AGVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp CCSEEEECC---SH--HHHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEECC---CH--HHHHHHHHHHHCCCeEEEEECC
Confidence 357888765 43 3467999999999999988764
No 165
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=40.80 E-value=25 Score=31.61 Aligned_cols=42 Identities=19% Similarity=0.116 Sum_probs=34.5
Q ss_pred CCCCEEEEEcCC---CCCCHHHHHHHHHHHHhCCcEEEEEeCCCc
Q 011531 5 HVNPHVVLLPYP---LQGHIKPMMSLAELLGSANFQVTFVNTDHN 46 (483)
Q Consensus 5 ~~~~~il~~~~~---~~GH~~p~l~La~~L~~rGH~V~~~~~~~~ 46 (483)
...||.+|++.| +.|-=.-...|+..|.+||++|+..--+++
T Consensus 20 ~~~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~Vt~~K~DPY 64 (295)
T 2vo1_A 20 FQSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPY 64 (295)
T ss_dssp -CCCEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEECS
T ss_pred cccceEEEEcCCcccccccHHHHHHHHHHHHHCCCcceeeecccc
Confidence 357899999997 456667788999999999999999976554
No 166
>3r8n_B 30S ribosomal protein S2; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_B 3fih_B* 3j18_B* 2wwl_B 3oar_B 3oaq_B 3ofb_B 3ofa_B 3ofp_B 3ofx_B 3ofy_B 3ofo_B 3r8o_B 4a2i_B 4gd1_B 4gd2_B 3i1m_B 1vs7_B* 3e1a_B 3e1c_B ...
Probab=40.70 E-value=33 Score=29.86 Aligned_cols=31 Identities=13% Similarity=0.127 Sum_probs=22.2
Q ss_pred CHHHHHHHHHHHHhCCcEEEEEeCCCchhhh
Q 011531 20 HIKPMMSLAELLGSANFQVTFVNTDHNHDLL 50 (483)
Q Consensus 20 H~~p~l~La~~L~~rGH~V~~~~~~~~~~~~ 50 (483)
++.-...+...++++|-+|.|+++.......
T Consensus 41 ~L~~A~~~i~~~~~~~~~iLfVgTk~~~~~~ 71 (218)
T 3r8n_B 41 MFNEALAELNKIASRKGKILFVGTKRAASEA 71 (218)
T ss_dssp GTTTHHHHHHHHHHTTCCCCEECCCTTTTTT
T ss_pred HHHHHHHHHHHHHhCCCEEEEEeCChHHHHH
Confidence 4444556667788899999999987655443
No 167
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=40.63 E-value=13 Score=34.18 Aligned_cols=38 Identities=18% Similarity=0.065 Sum_probs=26.4
Q ss_pred CCCCCCCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeC
Q 011531 1 MERSHVNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNT 43 (483)
Q Consensus 1 ~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~ 43 (483)
|..+...+||.|+..|..| ..+|..|+++||+|+++..
T Consensus 1 M~~~~~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 38 (303)
T 3g0o_A 1 MSLTGTDFHVGIVGLGSMG-----MGAARSCLRAGLSTWGADL 38 (303)
T ss_dssp ------CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCCCCCCeEEEECCCHHH-----HHHHHHHHHCCCeEEEEEC
Confidence 4444566899999766544 5789999999999998855
No 168
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=40.29 E-value=82 Score=24.59 Aligned_cols=64 Identities=8% Similarity=0.016 Sum_probs=39.7
Q ss_pred hCCceeccccccchhHHHHHHHHhhc-cceecCCCCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHH
Q 011531 390 AGVPMICWPQFSDQLVNSRCVSEVWK-IGFDMKDTCDGSIIEKLVRDLMENKREEIMGSTDRVATMAR 456 (483)
Q Consensus 390 ~GvP~l~~P~~~DQ~~na~~v~~~~G-~G~~l~~~~~~~~l~~~i~~ll~~~~~~~~~~a~~l~~~~~ 456 (483)
..+|+|++--..|.......+ + .| +--.+.+.++.+.|.++|.++++.. ...++..+.+++.+.
T Consensus 75 ~~~~ii~~s~~~~~~~~~~~~-~-~g~~~~~l~KP~~~~~L~~~i~~~l~~~-~~~~~~~~~~~~~~~ 139 (151)
T 3kcn_A 75 PNSVYLMLTGNQDLTTAMEAV-N-EGQVFRFLNKPCQMSDIKAAINAGIKQY-DLVTSKEELLKKTFA 139 (151)
T ss_dssp SSCEEEEEECGGGHHHHHHHH-H-HTCCSEEEESSCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHC--
T ss_pred CCcEEEEEECCCCHHHHHHHH-H-cCCeeEEEcCCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHh
Confidence 467777776655555444444 4 57 5445557899999999999999851 233444444444443
No 169
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=40.19 E-value=26 Score=30.64 Aligned_cols=40 Identities=23% Similarity=0.321 Sum_probs=27.7
Q ss_pred HHHHHHHHhhhhhcCCCCccEEEEcCCCCc------chHHHHHHcCCCeEEE
Q 011531 100 AFRDLLISLREETEQRQSPTCVIADGILCF------LTLDVSEELQIPLLAL 145 (483)
Q Consensus 100 ~~~~ll~~~~~~~~~~~~~D~VI~D~~~~~------~~~~~A~~lgIP~v~~ 145 (483)
.+.+.++++. .+||+|++|..... .|..+...+++|+|.+
T Consensus 92 ~~l~al~~L~------~~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGV 137 (225)
T 2w36_A 92 LFLKAWEKLR------TKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGV 137 (225)
T ss_dssp HHHHHHTTCC------SCCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEE
T ss_pred HHHHHHHhcC------CCCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEE
Confidence 3445555554 47999999987542 2445666779999997
No 170
>1j8m_F SRP54, signal recognition 54 kDa protein; signaling protein; 2.00A {Acidianus ambivalens} SCOP: a.24.13.1 c.37.1.10 PDB: 1j8y_F
Probab=39.41 E-value=1e+02 Score=28.08 Aligned_cols=40 Identities=20% Similarity=0.207 Sum_probs=33.4
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCCCch
Q 011531 8 PHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTDHNH 47 (483)
Q Consensus 8 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~~~ 47 (483)
..++++..++-|-..-...||..|+.+|++|.++..+...
T Consensus 99 ~vi~i~G~~G~GKTT~~~~la~~~~~~g~~v~l~~~D~~r 138 (297)
T 1j8m_F 99 YVIMLVGVQGTGKTTTAGKLAYFYKKKGFKVGLVGADVYR 138 (297)
T ss_dssp EEEEEECSSCSSTTHHHHHHHHHHHHTTCCEEEEECCCSS
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 3456666678899999999999999999999999987543
No 171
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=38.97 E-value=29 Score=27.49 Aligned_cols=47 Identities=4% Similarity=0.057 Sum_probs=37.1
Q ss_pred hCCceeccccccchhHHHHHHHHhhccceecCCCCCHHHHHHHHHHHHh
Q 011531 390 AGVPMICWPQFSDQLVNSRCVSEVWKIGFDMKDTCDGSIIEKLVRDLME 438 (483)
Q Consensus 390 ~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~~i~~ll~ 438 (483)
..+|+|++--..+...-.+.. + .|+--.+.+.++.++|.++|+++++
T Consensus 86 ~~ipvI~lTa~~~~~~~~~~~-~-~Ga~~yl~KP~~~~~L~~~i~~~l~ 132 (134)
T 3to5_A 86 KHLPVLMITAEAKREQIIEAA-Q-AGVNGYIVKPFTAATLKEKLDKIFE 132 (134)
T ss_dssp TTCCEEEEESSCCHHHHHHHH-H-TTCCEEEESSCCHHHHHHHHHHHCC
T ss_pred CCCeEEEEECCCCHHHHHHHH-H-CCCCEEEECCCCHHHHHHHHHHHHh
Confidence 468999888777666555555 4 7888888788999999999999874
No 172
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=38.94 E-value=14 Score=33.98 Aligned_cols=38 Identities=16% Similarity=0.168 Sum_probs=29.3
Q ss_pred CCCCCCCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeC
Q 011531 1 MERSHVNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNT 43 (483)
Q Consensus 1 ~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~ 43 (483)
|..+...+||.|+..|..| ..+|+.|+++||+|+++..
T Consensus 3 m~~~~~~~~IgiIG~G~mG-----~~~A~~l~~~G~~V~~~dr 40 (306)
T 3l6d_A 3 LSDESFEFDVSVIGLGAMG-----TIMAQVLLKQGKRVAIWNR 40 (306)
T ss_dssp CCCCCCSCSEEEECCSHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred CCcccCCCeEEEECCCHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 4455667899999766544 4789999999999998754
No 173
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=38.19 E-value=33 Score=31.73 Aligned_cols=33 Identities=18% Similarity=0.256 Sum_probs=27.6
Q ss_pred CCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeC
Q 011531 6 VNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNT 43 (483)
Q Consensus 6 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~ 43 (483)
+.+||.|+..|..| ..+|+.|+++||+|+++..
T Consensus 30 ~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 62 (320)
T 4dll_A 30 YARKITFLGTGSMG-----LPMARRLCEAGYALQVWNR 62 (320)
T ss_dssp CCSEEEEECCTTTH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEECccHHH-----HHHHHHHHhCCCeEEEEcC
Confidence 45799999887776 6789999999999998755
No 174
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=38.05 E-value=1.7e+02 Score=24.22 Aligned_cols=78 Identities=12% Similarity=0.075 Sum_probs=43.4
Q ss_pred eeEEeccCH-HH-HhccCCccceeeccCchhHHHH---HHhCCceeccccccchhHHHHHHHHhhccceecCCCCCHHHH
Q 011531 355 RFIVSWAPQ-EE-VLAHPAVGGFLTHGGWNSTLEG---IAAGVPMICWPQFSDQLVNSRCVSEVWKIGFDMKDTCDGSII 429 (483)
Q Consensus 355 v~~~~~~p~-~~-ll~~~~~~~~ItHgG~gs~~ea---l~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l 429 (483)
..+++.++. .. +...++. .++--||.||+-|+ +.+++|++.+|.+. .....+.+ .-..... -.-+++++
T Consensus 91 ~i~~~~~~~Rk~~m~~~sda-~IvlpGg~GTL~E~~~al~~~kpV~~l~~~~---~~~gfi~~-~~~~~i~-~~~~~~e~ 164 (176)
T 2iz6_A 91 PIVTGLGSARDNINALSSNV-LVAVGMGPGTAAEVALALKAKKPVVLLGTQP---EAEKFFTS-LDAGLVH-VAADVAGA 164 (176)
T ss_dssp EEECCCCSSSCCCCGGGCSE-EEEESCCHHHHHHHHHHHHTTCCEEEESCCH---HHHHHHHH-HCTTTEE-EESSHHHH
T ss_pred eEEcCCHHHHHHHHHHhCCE-EEEecCCccHHHHHHHHHHhCCcEEEEcCcc---cccccCCh-hhcCeEE-EcCCHHHH
Confidence 444566664 22 3334443 45667889986655 67999999999842 11222311 1111111 23467777
Q ss_pred HHHHHHHHh
Q 011531 430 EKLVRDLME 438 (483)
Q Consensus 430 ~~~i~~ll~ 438 (483)
.+.+.+.++
T Consensus 165 ~~~l~~~~~ 173 (176)
T 2iz6_A 165 IAAVKQLLA 173 (176)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777766654
No 175
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=37.78 E-value=21 Score=28.33 Aligned_cols=35 Identities=23% Similarity=0.367 Sum_probs=27.6
Q ss_pred CCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCCC
Q 011531 6 VNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTDH 45 (483)
Q Consensus 6 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~ 45 (483)
-+.|++++.+|..| ..+++.|.++||+|+++....
T Consensus 6 ~~~~viIiG~G~~G-----~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 6 ICNHALLVGYGRVG-----SLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CCSCEEEECCSHHH-----HHHHHHHHHTTCCEEEEESCH
T ss_pred CCCCEEEECcCHHH-----HHHHHHHHHCCCCEEEEECCH
Confidence 35688888775544 578999999999999998753
No 176
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=37.73 E-value=1.4e+02 Score=28.08 Aligned_cols=40 Identities=10% Similarity=0.063 Sum_probs=30.1
Q ss_pred CCEEEEEcCCCCC----CHHHHHHHHHHHHhCCcEEEEEeCCCc
Q 011531 7 NPHVVLLPYPLQG----HIKPMMSLAELLGSANFQVTFVNTDHN 46 (483)
Q Consensus 7 ~~~il~~~~~~~G----H~~p~l~La~~L~~rGH~V~~~~~~~~ 46 (483)
..+++++++|+.+ ...-+..+.+.|.+.+.+|++++....
T Consensus 231 ~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~g~~~ 274 (398)
T 3oti_A 231 ARPEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFVLALGDLD 274 (398)
T ss_dssp SSCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEEEEECTTSC
T ss_pred CCCEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEEEEEECCcC
Confidence 4567888888873 344578888999988999998887543
No 177
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=37.19 E-value=70 Score=30.03 Aligned_cols=27 Identities=30% Similarity=0.582 Sum_probs=20.8
Q ss_pred cCCccceeeccCchhH---HHHHHhCCceecc
Q 011531 369 HPAVGGFLTHGGWNST---LEGIAAGVPMICW 397 (483)
Q Consensus 369 ~~~~~~~ItHgG~gs~---~eal~~GvP~l~~ 397 (483)
.|++ +|++||.-++ ..|...|+|+++.
T Consensus 92 ~PDv--Vi~~g~~~s~p~~laA~~~~iP~vih 121 (365)
T 3s2u_A 92 RPVC--VLGLGGYVTGPGGLAARLNGVPLVIH 121 (365)
T ss_dssp CCSE--EEECSSSTHHHHHHHHHHTTCCEEEE
T ss_pred CCCE--EEEcCCcchHHHHHHHHHcCCCEEEE
Confidence 5666 9999998664 5567789999863
No 178
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=37.01 E-value=2e+02 Score=28.56 Aligned_cols=34 Identities=15% Similarity=0.113 Sum_probs=24.1
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCCC
Q 011531 7 NPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTDH 45 (483)
Q Consensus 7 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~ 45 (483)
..|++++. +-.-.+.|++.|.+-|-+|+.+.+..
T Consensus 360 Gkrv~i~g-----d~~~~~~la~~L~ElGm~vv~v~~~~ 393 (519)
T 1qgu_B 360 GKKFGLYG-----DPDFVMGLTRFLLELGCEPTVILSHN 393 (519)
T ss_dssp TCEEEEES-----CHHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred CCEEEEEC-----CchHHHHHHHHHHHCCCEEEEEEeCC
Confidence 35777773 34456778888888999988766544
No 179
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=36.88 E-value=1.3e+02 Score=22.83 Aligned_cols=63 Identities=8% Similarity=-0.004 Sum_probs=37.3
Q ss_pred hCCceeccccccchhHHHHHHHHhhccceecCCCCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHH
Q 011531 390 AGVPMICWPQFSDQLVNSRCVSEVWKIGFDMKDTCDGSIIEKLVRDLMENKREEIMGSTDRVATMA 455 (483)
Q Consensus 390 ~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~~i~~ll~~~~~~~~~~a~~l~~~~ 455 (483)
..+|.|++--..|.......+ +..|+--.+.+.++.++|.++|++++.. .......+++....
T Consensus 71 ~~~~ii~~s~~~~~~~~~~~~-~~~ga~~~l~KP~~~~~L~~~i~~~~~~--~~~~~~~~~~~~~~ 133 (139)
T 2jk1_A 71 PETVRIIITGYTDSASMMAAI-NDAGIHQFLTKPWHPEQLLSSARNAARM--FTLARENERLSLEM 133 (139)
T ss_dssp TTSEEEEEESCTTCHHHHHHH-HHTTCCEEEESSCCHHHHHHHHHHHHHH--HHHHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCChHHHHHHH-HhhchhhhccCCCCHHHHHHHHHHHHHH--HHHHHHHHHHHHHH
Confidence 356777765555544444444 3234544555789999999999999874 33333333443333
No 180
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=36.47 E-value=20 Score=34.02 Aligned_cols=30 Identities=27% Similarity=0.291 Sum_probs=25.0
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEE
Q 011531 7 NPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFV 41 (483)
Q Consensus 7 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~ 41 (483)
.|||+|+..|--| +.+|..|+++||+|+++
T Consensus 1 sm~V~IVGaGpaG-----l~~A~~L~~~G~~v~v~ 30 (412)
T 4hb9_A 1 SMHVGIIGAGIGG-----TCLAHGLRKHGIKVTIY 30 (412)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEE
T ss_pred CCEEEEECcCHHH-----HHHHHHHHhCCCCEEEE
Confidence 3789988776444 78899999999999987
No 181
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=36.23 E-value=1.7e+02 Score=26.46 Aligned_cols=108 Identities=12% Similarity=0.106 Sum_probs=62.7
Q ss_pred CCCCCEEEEEcCCCCCCHHHHHHHHHHHHhC--CcEEEEEeC-CCchhhhhhccccccccCCCCCeEEEeCCCCCCCCcc
Q 011531 4 SHVNPHVVLLPYPLQGHIKPMMSLAELLGSA--NFQVTFVNT-DHNHDLLLRNTDITSFCNRFPNFQFRSIPSGLPANVI 80 (483)
Q Consensus 4 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~r--GH~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~f~~~p~~l~~~~~ 80 (483)
..+++||+++..+. || -+.+|.++-.+- ..+|..+.+ ......+++.. ++.+..+|....
T Consensus 87 ~~~~~ri~vl~Sg~-g~--~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A~~~----------gIp~~~~~~~~~---- 149 (286)
T 3n0v_A 87 PNHRPKVVIMVSKA-DH--CLNDLLYRQRIGQLGMDVVAVVSNHPDLEPLAHWH----------KIPYYHFALDPK---- 149 (286)
T ss_dssp TTCCCEEEEEESSC-CH--HHHHHHHHHHTTSSCCEEEEEEESSSTTHHHHHHT----------TCCEEECCCBTT----
T ss_pred CCCCcEEEEEEeCC-CC--CHHHHHHHHHCCCCCcEEEEEEeCcHHHHHHHHHc----------CCCEEEeCCCcC----
Confidence 45678999888877 44 445555554432 367776654 33344444443 477777763211
Q ss_pred cCCCCHHHHHHHHHHhchHHHHHHHHHhhhhhcCCCCccEEEEcCCCCcchHHHHHHcCCCeEEEecc
Q 011531 81 RSGLTAKDVFDAMKAVSKPAFRDLLISLREETEQRQSPTCVIADGILCFLTLDVSEELQIPLLALRTH 148 (483)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~D~VI~D~~~~~~~~~~A~~lgIP~v~~~~~ 148 (483)
+ +......+.+.+++ .++|+||.-.+.-.....+-+.+.-.++-+.++
T Consensus 150 ----~--------r~~~~~~~~~~l~~--------~~~Dlivla~y~~il~~~~l~~~~~~~iNiHpS 197 (286)
T 3n0v_A 150 ----D--------KPGQERKVLQVIEE--------TGAELVILARYMQVLSPELCRRLDGWAINIHHS 197 (286)
T ss_dssp ----B--------HHHHHHHHHHHHHH--------HTCSEEEESSCCSCCCHHHHHHTTTSEEEEEEC
T ss_pred ----C--------HHHHHHHHHHHHHh--------cCCCEEEecccccccCHHHHhhhcCCeEEeccc
Confidence 0 01122334455555 469999998775432566667777677777553
No 182
>1uii_A Geminin; human, DNA replication, cell cycle; 2.00A {Homo sapiens} SCOP: h.1.28.1
Probab=36.18 E-value=1.2e+02 Score=21.69 Aligned_cols=47 Identities=15% Similarity=0.217 Sum_probs=33.5
Q ss_pred HHHHHHHHHHh-HhHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHhh
Q 011531 428 IIEKLVRDLME-NKREEIMGSTDRVATMARDAVNEGGSSYRNLDGLIEDIRLMA 480 (483)
Q Consensus 428 ~l~~~i~~ll~-~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~l~~~l~~~~ 480 (483)
.=+.|+...|+ | ..+.+....+.+.+... -.....+++|+++.++++
T Consensus 36 ~RR~AL~eaL~EN--~~Lh~~ie~l~eEi~~l----k~en~eL~elae~~q~ma 83 (83)
T 1uii_A 36 KRRKALYEALKEN--EKLHKEIEQKDNEIARL----KKENKELAEVAEHVQYMA 83 (83)
T ss_dssp HHHHHHHHHHHHH--HHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHH--HHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHhcC
Confidence 33566777777 6 78888888888888664 233456888888888764
No 183
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=35.31 E-value=32 Score=31.68 Aligned_cols=39 Identities=13% Similarity=0.172 Sum_probs=30.1
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCCCchhhhhh
Q 011531 8 PHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTDHNHDLLLR 52 (483)
Q Consensus 8 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~~~~~~~~ 52 (483)
|||+++..|+.| ..+|..|+++||+|+++.... .+.+.+
T Consensus 3 mkI~IiGaGaiG-----~~~a~~L~~~g~~V~~~~r~~-~~~i~~ 41 (312)
T 3hn2_A 3 LRIAIVGAGALG-----LYYGALLQRSGEDVHFLLRRD-YEAIAG 41 (312)
T ss_dssp -CEEEECCSTTH-----HHHHHHHHHTSCCEEEECSTT-HHHHHH
T ss_pred CEEEEECcCHHH-----HHHHHHHHHCCCeEEEEEcCc-HHHHHh
Confidence 689999888887 456889999999999998754 444443
No 184
>1hyq_A MIND, cell division inhibitor (MIND-1); MINC, FTSZ, bacterial cell division, cell cycle; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.10
Probab=35.18 E-value=2.2e+02 Score=24.68 Aligned_cols=36 Identities=19% Similarity=0.182 Sum_probs=29.7
Q ss_pred EEEE-cCCCCCCHHHHHHHHHHHHhCCcEEEEEeCCC
Q 011531 10 VVLL-PYPLQGHIKPMMSLAELLGSANFQVTFVNTDH 45 (483)
Q Consensus 10 il~~-~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~ 45 (483)
|+|+ +-|+-|-..-...||..|+++|++|.++-.+.
T Consensus 5 I~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (263)
T 1hyq_A 5 ITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADI 41 (263)
T ss_dssp EEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred EEEECCCCCCCHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 4443 44778999999999999999999999998654
No 185
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=34.75 E-value=2.3e+02 Score=26.06 Aligned_cols=109 Identities=11% Similarity=0.112 Sum_probs=58.0
Q ss_pred eEEEEecCcccCCCHHHHHHHHHHHHhC-CCeEEEEEcCCccCCCCCCCCCChhhhhhcCCCceeEEeccCHHHHhccCC
Q 011531 293 SVLYVSFGSLVGLTREQMSELWHGLVNR-GQRFLLVVRPDLILGEPGAAETPLAQNEGTEERNRFIVSWAPQEEVLAHPA 371 (483)
Q Consensus 293 ~vi~vs~Gs~~~~~~~~~~~~~~a~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~ 371 (483)
.+.+|..|.+.. ..+.++... +..++.++..+ ++....-....+ +.-+-...+++..++
T Consensus 6 rvgiiG~G~~g~-------~~~~~l~~~~~~~l~av~d~~-----------~~~~~~~a~~~g--~~~~~~~~~~l~~~~ 65 (344)
T 3euw_A 6 RIALFGAGRIGH-------VHAANIAANPDLELVVIADPF-----------IEGAQRLAEANG--AEAVASPDEVFARDD 65 (344)
T ss_dssp EEEEECCSHHHH-------HHHHHHHHCTTEEEEEEECSS-----------HHHHHHHHHTTT--CEEESSHHHHTTCSC
T ss_pred EEEEECCcHHHH-------HHHHHHHhCCCcEEEEEECCC-----------HHHHHHHHHHcC--CceeCCHHHHhcCCC
Confidence 477888887653 244555544 45666555321 111111011111 223455788888667
Q ss_pred ccceeeccCch----hHHHHHHhCCceecc-cccc--chhHHHHHHHHhhccceecC
Q 011531 372 VGGFLTHGGWN----STLEGIAAGVPMICW-PQFS--DQLVNSRCVSEVWKIGFDMK 421 (483)
Q Consensus 372 ~~~~ItHgG~g----s~~eal~~GvP~l~~-P~~~--DQ~~na~~v~~~~G~G~~l~ 421 (483)
+++++---... -+.+|+.+|+++++= |+.. ++-.-...++++.|+-+.+.
T Consensus 66 ~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~ 122 (344)
T 3euw_A 66 IDGIVIGSPTSTHVDLITRAVERGIPALCEKPIDLDIEMVRACKEKIGDGASKVMLG 122 (344)
T ss_dssp CCEEEECSCGGGHHHHHHHHHHTTCCEEECSCSCSCHHHHHHHHHHHGGGGGGEEEC
T ss_pred CCEEEEeCCchhhHHHHHHHHHcCCcEEEECCCCCCHHHHHHHHHHHHhcCCeEEec
Confidence 77777555444 367789999998763 5543 33333233334456655554
No 186
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=34.50 E-value=24 Score=28.00 Aligned_cols=63 Identities=10% Similarity=0.065 Sum_probs=38.4
Q ss_pred hCCceeccccccchhHHHHHHHHhhc-cceecCCCCCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHH
Q 011531 390 AGVPMICWPQFSDQLVNSRCVSEVWK-IGFDMKDTCDGSIIEKLVRDLMENKREEIMGSTDRVATMAR 456 (483)
Q Consensus 390 ~GvP~l~~P~~~DQ~~na~~v~~~~G-~G~~l~~~~~~~~l~~~i~~ll~~~~~~~~~~a~~l~~~~~ 456 (483)
..+|+|++--..+.......+ + .| +--.+.+.++.+.|.++|.+++.. ..+++..+++.+.++
T Consensus 78 ~~~~ii~ls~~~~~~~~~~~~-~-~g~~~~~l~kP~~~~~L~~~i~~~~~~--~~~~~~~~~~~~~~~ 141 (154)
T 2rjn_A 78 PDIERVVISGYADAQATIDAV-N-RGKISRFLLKPWEDEDVFKVVEKGLQL--AFLREENLRLQEETE 141 (154)
T ss_dssp TTSEEEEEECGGGHHHHHHHH-H-TTCCSEEEESSCCHHHHHHHHHHHHHH--HHHHHHTTSCCC---
T ss_pred CCCcEEEEecCCCHHHHHHHH-h-ccchheeeeCCCCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHH
Confidence 367888776555543333344 3 45 545565789999999999999985 444444444443433
No 187
>3qrx_B Melittin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 1bh1_A 2mlt_A
Probab=34.47 E-value=13 Score=19.50 Aligned_cols=17 Identities=24% Similarity=0.573 Sum_probs=14.3
Q ss_pred CchhHHHHHHhCCceec
Q 011531 380 GWNSTLEGIAAGVPMIC 396 (483)
Q Consensus 380 G~gs~~eal~~GvP~l~ 396 (483)
|.|++.--++.|.|.++
T Consensus 1 giGa~LKVLa~~LP~li 17 (26)
T 3qrx_B 1 GIGAVLKVLTTGLPALI 17 (26)
T ss_pred CchHHHHHHHccchHHH
Confidence 67888899999998775
No 188
>3giu_A Pyrrolidone-carboxylate peptidase; IDP00836, hydrolase, PROT thiol protease, structural genomics; HET: MSE PG4; 1.25A {Staphylococcus aureus subsp} SCOP: c.56.4.0
Probab=34.44 E-value=69 Score=27.71 Aligned_cols=28 Identities=14% Similarity=0.214 Sum_probs=21.7
Q ss_pred CCCEEEEEcCCCCC--CHHHHHHHHHHHHh
Q 011531 6 VNPHVVLLPYPLQG--HIKPMMSLAELLGS 33 (483)
Q Consensus 6 ~~~~il~~~~~~~G--H~~p~l~La~~L~~ 33 (483)
.+|||++..|+-+| .+||...++++|..
T Consensus 2 ~~m~VLvTGF~PF~~~~~NPS~~~v~~L~~ 31 (215)
T 3giu_A 2 NAMHILVTGFAPFDNQNINPSWEAVTQLED 31 (215)
T ss_dssp --CEEEEEEECCCTTCSCCHHHHHHHHSCS
T ss_pred CCcEEEEEecCCCCCCCCChHHHHHHHhcc
Confidence 46899999886544 47999999999986
No 189
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=34.40 E-value=20 Score=35.79 Aligned_cols=36 Identities=14% Similarity=0.345 Sum_probs=29.0
Q ss_pred CCCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCCC
Q 011531 5 HVNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTDH 45 (483)
Q Consensus 5 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~ 45 (483)
.+|.||+++..|.-| +.+|+.|.++|++||++....
T Consensus 40 ~~KprVVIIGgG~AG-----l~~A~~L~~~~~~VtLId~~~ 75 (502)
T 4g6h_A 40 SDKPNVLILGSGWGA-----ISFLKHIDTKKYNVSIISPRS 75 (502)
T ss_dssp CSSCEEEEECSSHHH-----HHHHHHSCTTTCEEEEEESSS
T ss_pred CCCCCEEEECCcHHH-----HHHHHHhhhCCCcEEEECCCC
Confidence 456799999877544 578999999999999998743
No 190
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=34.26 E-value=1.4e+02 Score=26.65 Aligned_cols=34 Identities=12% Similarity=0.196 Sum_probs=25.8
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCC
Q 011531 8 PHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTD 44 (483)
Q Consensus 8 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~ 44 (483)
-|.++++.++.| =-.++|++|+++|++|+++.-.
T Consensus 9 ~k~vlVTGas~G---IG~aia~~l~~~G~~V~~~~r~ 42 (285)
T 3sc4_A 9 GKTMFISGGSRG---IGLAIAKRVAADGANVALVAKS 42 (285)
T ss_dssp TCEEEEESCSSH---HHHHHHHHHHTTTCEEEEEESC
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEECC
Confidence 356777776653 3468899999999999988753
No 191
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=34.19 E-value=26 Score=30.82 Aligned_cols=33 Identities=21% Similarity=0.141 Sum_probs=28.3
Q ss_pred CCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeC
Q 011531 6 VNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNT 43 (483)
Q Consensus 6 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~ 43 (483)
++|||.|+..|..|- .||..|+++||+|+.+..
T Consensus 5 ~~mkI~IIG~G~~G~-----sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTV-----NMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp CCCEEEEECCSCCCS-----CHHHHHHHTTCEEEECSS
T ss_pred CCcEEEEEeeCHHHH-----HHHHHHHHCCCEEEEecC
Confidence 568999999998874 589999999999997765
No 192
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=33.75 E-value=2e+02 Score=26.63 Aligned_cols=126 Identities=14% Similarity=0.110 Sum_probs=66.4
Q ss_pred CCeEEEEecCcccCCCHHHHHHHHHHHHhC--CCeEEEEEcCCccCCCCCCCCCChhhhhhcCCCceeEEeccCHHHHhc
Q 011531 291 PKSVLYVSFGSLVGLTREQMSELWHGLVNR--GQRFLLVVRPDLILGEPGAAETPLAQNEGTEERNRFIVSWAPQEEVLA 368 (483)
Q Consensus 291 ~~~vi~vs~Gs~~~~~~~~~~~~~~a~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~ 368 (483)
.-.+.+|..|.+.. ..+.++... +.+++.++..+. .....+.++. . + ..+-...+++.
T Consensus 13 ~~rvgiiG~G~~g~-------~~~~~l~~~~~~~~lvav~d~~~--------~~~~~~~~~~--~-~--~~~~~~~~ll~ 72 (354)
T 3q2i_A 13 KIRFALVGCGRIAN-------NHFGALEKHADRAELIDVCDIDP--------AALKAAVERT--G-A--RGHASLTDMLA 72 (354)
T ss_dssp CEEEEEECCSTTHH-------HHHHHHHHTTTTEEEEEEECSSH--------HHHHHHHHHH--C-C--EEESCHHHHHH
T ss_pred cceEEEEcCcHHHH-------HHHHHHHhCCCCeEEEEEEcCCH--------HHHHHHHHHc--C-C--ceeCCHHHHhc
Confidence 34688899988763 234555554 556666663210 0001111111 1 3 34456788888
Q ss_pred cCCccceeeccCch----hHHHHHHhCCceecc-cccc--chhHHHHHHHHhhccceecC--CCCCHHHHHHHHHHHHh
Q 011531 369 HPAVGGFLTHGGWN----STLEGIAAGVPMICW-PQFS--DQLVNSRCVSEVWKIGFDMK--DTCDGSIIEKLVRDLME 438 (483)
Q Consensus 369 ~~~~~~~ItHgG~g----s~~eal~~GvP~l~~-P~~~--DQ~~na~~v~~~~G~G~~l~--~~~~~~~l~~~i~~ll~ 438 (483)
.+++++++----.. -+.+|+.+|+++++= |+.. ++-.-...++++.|+-+.+. ..+.+ ..+.++++++
T Consensus 73 ~~~~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~a~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p--~~~~~k~~i~ 149 (354)
T 3q2i_A 73 QTDADIVILTTPSGLHPTQSIECSEAGFHVMTEKPMATRWEDGLEMVKAADKAKKHLFVVKQNRRNA--TLQLLKRAMQ 149 (354)
T ss_dssp HCCCSEEEECSCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCGGGGSH--HHHHHHHHHH
T ss_pred CCCCCEEEECCCcHHHHHHHHHHHHCCCCEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEEcccCCH--HHHHHHHHHh
Confidence 66776677533333 466788999998873 5543 33333333334456655554 33444 2344455554
No 193
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=33.55 E-value=2.3e+02 Score=24.24 Aligned_cols=104 Identities=7% Similarity=0.052 Sum_probs=57.8
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhC--CcEEEEEeCCC-chh--hhhhccccccccCCCCCeEEEeCCC-CCCCCccc
Q 011531 8 PHVVLLPYPLQGHIKPMMSLAELLGSA--NFQVTFVNTDH-NHD--LLLRNTDITSFCNRFPNFQFRSIPS-GLPANVIR 81 (483)
Q Consensus 8 ~~il~~~~~~~GH~~p~l~La~~L~~r--GH~V~~~~~~~-~~~--~~~~~~~~~~~~~~~~~v~f~~~p~-~l~~~~~~ 81 (483)
+||+++-.|+.+ -+.++.+.|.+. +|+|..+.+.. ... ..++.. ++.+..++. .+
T Consensus 4 ~ki~vl~sG~g~---~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~~----------gIp~~~~~~~~~------ 64 (212)
T 3av3_A 4 KRLAVFASGSGT---NFQAIVDAAKRGDLPARVALLVCDRPGAKVIERAARE----------NVPAFVFSPKDY------ 64 (212)
T ss_dssp EEEEEECCSSCH---HHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHHT----------TCCEEECCGGGS------
T ss_pred cEEEEEEECCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHHc----------CCCEEEeCcccc------
Confidence 478888777744 356677788877 79987666532 221 222222 355554431 11
Q ss_pred CCCCHHHHHHHHHHhchHHHHHHHHHhhhhhcCCCCccEEEEcCCCCcchHHHHHHcCCCeEEEecc
Q 011531 82 SGLTAKDVFDAMKAVSKPAFRDLLISLREETEQRQSPTCVIADGILCFLTLDVSEELQIPLLALRTH 148 (483)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~D~VI~D~~~~~~~~~~A~~lgIP~v~~~~~ 148 (483)
.+ ...+.+.+.+.+++ .+||+||+-.+..-+...+-+.+...++-+.++
T Consensus 65 --~~--------~~~~~~~~~~~l~~--------~~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 113 (212)
T 3av3_A 65 --PS--------KAAFESEILRELKG--------RQIDWIALAGYMRLIGPTLLSAYEGKIVNIHPS 113 (212)
T ss_dssp --SS--------HHHHHHHHHHHHHH--------TTCCEEEESSCCSCCCHHHHHHTTTCEEEEESS
T ss_pred --cc--------hhhhHHHHHHHHHh--------cCCCEEEEchhhhhCCHHHHhhhcCCEEEEecC
Confidence 11 11122333344444 579999998764322555666666677777553
No 194
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=33.35 E-value=36 Score=31.38 Aligned_cols=33 Identities=3% Similarity=0.077 Sum_probs=27.6
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCCC
Q 011531 7 NPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTDH 45 (483)
Q Consensus 7 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~ 45 (483)
+|||+++..+ ....+++++.++||+|.++....
T Consensus 2 ~m~Ililg~g------~~~~l~~a~~~~G~~v~~~~~~~ 34 (334)
T 2r85_A 2 KVRIATYASH------SALQILKGAKDEGFETIAFGSSK 34 (334)
T ss_dssp CSEEEEESST------THHHHHHHHHHTTCCEEEESCGG
T ss_pred ceEEEEECCh------hHHHHHHHHHhCCCEEEEEECCC
Confidence 4799998876 46789999999999999887743
No 195
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=33.17 E-value=44 Score=25.94 Aligned_cols=30 Identities=17% Similarity=0.100 Sum_probs=21.5
Q ss_pred CCccEEEEcCCCC--cchHHHHHH---cCCCeEEEe
Q 011531 116 QSPTCVIADGILC--FLTLDVSEE---LQIPLLALR 146 (483)
Q Consensus 116 ~~~D~VI~D~~~~--~~~~~~A~~---lgIP~v~~~ 146 (483)
.+||+||.|...+ . |..+++. .++|++.++
T Consensus 52 ~~~DlvllDi~mP~~~-G~el~~~lr~~~ipvI~lT 86 (123)
T 2lpm_A 52 GQFDIAIIDVNLDGEP-SYPVADILAERNVPFIFAT 86 (123)
T ss_dssp CCSSEEEECSSSSSCC-SHHHHHHHHHTCCSSCCBC
T ss_pred CCCCEEEEecCCCCCC-HHHHHHHHHcCCCCEEEEe
Confidence 6899999998765 4 5555555 478877653
No 196
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=32.83 E-value=1.3e+02 Score=26.39 Aligned_cols=37 Identities=5% Similarity=0.026 Sum_probs=26.1
Q ss_pred CEEEEEcCCCCCCH-HHHHHHHHHHHhCCcEEEEEeCC
Q 011531 8 PHVVLLPYPLQGHI-KPMMSLAELLGSANFQVTFVNTD 44 (483)
Q Consensus 8 ~~il~~~~~~~GH~-~p~l~La~~L~~rGH~V~~~~~~ 44 (483)
|||+++..-+.-++ ..+...++.++.-|.+|.+++.+
T Consensus 2 mrilvINPnts~~~T~~i~~~~~~~~~p~~~i~~~t~~ 39 (245)
T 3qvl_A 2 VRIQVINPNTSLAMTETIGAAARAVAAPGTEILAVCPR 39 (245)
T ss_dssp EEEEEECSSCCHHHHHHHHHHHHHHCCTTEEEEEECCS
T ss_pred CEEEEEeCCCCHHHHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 68877777666555 45666777777778888877763
No 197
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=32.80 E-value=37 Score=31.49 Aligned_cols=33 Identities=21% Similarity=0.191 Sum_probs=27.9
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeC
Q 011531 7 NPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNT 43 (483)
Q Consensus 7 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~ 43 (483)
.+||.|+..+..| +-.+|+.|+++||+|+..-.
T Consensus 4 ~~~i~~iGiGg~G----ms~~A~~L~~~G~~V~~~D~ 36 (326)
T 3eag_A 4 MKHIHIIGIGGTF----MGGLAAIAKEAGFEVSGCDA 36 (326)
T ss_dssp CCEEEEESCCSHH----HHHHHHHHHHTTCEEEEEES
T ss_pred CcEEEEEEECHHH----HHHHHHHHHhCCCEEEEEcC
Confidence 4689999998877 55799999999999997754
No 198
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=32.54 E-value=34 Score=31.65 Aligned_cols=39 Identities=13% Similarity=0.160 Sum_probs=30.5
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCCCchhhhhh
Q 011531 8 PHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTDHNHDLLLR 52 (483)
Q Consensus 8 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~~~~~~~~ 52 (483)
|||+++..|+.| ..+|..|++.||+|+++.... .+.+.+
T Consensus 3 mkI~IiGaGaiG-----~~~a~~L~~~g~~V~~~~r~~-~~~i~~ 41 (320)
T 3i83_A 3 LNILVIGTGAIG-----SFYGALLAKTGHCVSVVSRSD-YETVKA 41 (320)
T ss_dssp CEEEEESCCHHH-----HHHHHHHHHTTCEEEEECSTT-HHHHHH
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCeEEEEeCCh-HHHHHh
Confidence 789999888766 467889999999999998754 344443
No 199
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=32.43 E-value=1.5e+02 Score=28.07 Aligned_cols=37 Identities=8% Similarity=-0.034 Sum_probs=29.0
Q ss_pred CEEEEEcCCCCC-CHHHHHHHHHHHHhCCcEEEEEeCC
Q 011531 8 PHVVLLPYPLQG-HIKPMMSLAELLGSANFQVTFVNTD 44 (483)
Q Consensus 8 ~~il~~~~~~~G-H~~p~l~La~~L~~rGH~V~~~~~~ 44 (483)
.+++++++|+.+ .-..+..+.+.|.+.|.+|.+.+..
T Consensus 221 ~~~Vlv~~Gs~~~~~~~~~~~~~al~~~~~~vv~~~g~ 258 (404)
T 3h4t_A 221 SPPVYVGFGSGPAPAEAARVAIEAVRAQGRRVVLSSGW 258 (404)
T ss_dssp SCCEEECCTTSCCCTTHHHHHHHHHHHTTCCEEEECTT
T ss_pred CCeEEEECCCCCCcHHHHHHHHHHHHhCCCEEEEEeCC
Confidence 456788888887 5555778888898889999887764
No 200
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=32.41 E-value=27 Score=31.36 Aligned_cols=48 Identities=8% Similarity=0.051 Sum_probs=40.1
Q ss_pred CCCEEEEEcCCCCCCHHHHHHHHHH--------HHhC-CcEEEEEeCCCchhhhhhc
Q 011531 6 VNPHVVLLPYPLQGHIKPMMSLAEL--------LGSA-NFQVTFVNTDHNHDLLLRN 53 (483)
Q Consensus 6 ~~~~il~~~~~~~GH~~p~l~La~~--------L~~r-GH~V~~~~~~~~~~~~~~~ 53 (483)
.+.+|++.+.++-.|-....-++.- |..+ |++|+.++...-.+.+.+.
T Consensus 119 ~~~~Vvlatv~gD~HdiG~~iv~~~k~~~~~~~L~~~~G~eVi~LG~~vp~e~iv~a 175 (262)
T 1xrs_B 119 RKIVVVGASTGTDAHTVGIDAIMNMKGYAGHYGLERYEMIDAYNLGSQVANEDFIKK 175 (262)
T ss_dssp SCEEEEEEEBTTCCCCHHHHHHHSTTCBTTBCCGGGCTTEEEEECCSSBCHHHHHHH
T ss_pred CCCEEEEEeCCCCCchHHHHHHhhhhcccchHHHHhcCCcEEEECCCCCCHHHHHHH
Confidence 4678999999999999999999987 9999 9999999886555555443
No 201
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=32.13 E-value=2.3e+02 Score=25.62 Aligned_cols=108 Identities=17% Similarity=0.225 Sum_probs=62.7
Q ss_pred CCCCCEEEEEcCCCCCCHHHHHHHHHHHHhC--CcEEEEEeC-CCchhhhhhccccccccCCCCCeEEEeCCCCCCCCcc
Q 011531 4 SHVNPHVVLLPYPLQGHIKPMMSLAELLGSA--NFQVTFVNT-DHNHDLLLRNTDITSFCNRFPNFQFRSIPSGLPANVI 80 (483)
Q Consensus 4 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~r--GH~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~f~~~p~~l~~~~~ 80 (483)
..+++||+++..+. || -+.+|.++-.+. ..+|..+.+ ......+++.. ++.+..+|....
T Consensus 92 ~~~~~ri~vl~Sg~-g~--~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A~~~----------gIp~~~~~~~~~---- 154 (292)
T 3lou_A 92 VAARPKVLIMVSKL-EH--CLADLLFRWKMGELKMDIVGIVSNHPDFAPLAAQH----------GLPFRHFPITAD---- 154 (292)
T ss_dssp TTSCCEEEEEECSC-CH--HHHHHHHHHHHTSSCCEEEEEEESSSTTHHHHHHT----------TCCEEECCCCSS----
T ss_pred cCCCCEEEEEEcCC-Cc--CHHHHHHHHHcCCCCcEEEEEEeCcHHHHHHHHHc----------CCCEEEeCCCcC----
Confidence 45578998888776 55 355555554443 357766654 33344444443 477777774211
Q ss_pred cCCCCHHHHHHHHHHhchHHHHHHHHHhhhhhcCCCCccEEEEcCCCCcchHHHHHHcCCCeEEEecc
Q 011531 81 RSGLTAKDVFDAMKAVSKPAFRDLLISLREETEQRQSPTCVIADGILCFLTLDVSEELQIPLLALRTH 148 (483)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~D~VI~D~~~~~~~~~~A~~lgIP~v~~~~~ 148 (483)
+ +....+.+.+.+++ .++|+||.-.+.-.....+-+.+.-.++-+.++
T Consensus 155 ----~--------r~~~~~~~~~~l~~--------~~~Dlivla~y~~il~~~~l~~~~~~~iNiHpS 202 (292)
T 3lou_A 155 ----T--------KAQQEAQWLDVFET--------SGAELVILARYMQVLSPEASARLANRAINIHHS 202 (292)
T ss_dssp ----C--------HHHHHHHHHHHHHH--------HTCSEEEESSCCSCCCHHHHHHTTTSEEEEEEE
T ss_pred ----C--------HHHHHHHHHHHHHH--------hCCCEEEecCchhhCCHHHHhhhcCCeEEeCCC
Confidence 0 01122334455555 469999998775432666777777777777553
No 202
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=32.10 E-value=52 Score=28.22 Aligned_cols=46 Identities=13% Similarity=0.011 Sum_probs=33.7
Q ss_pred cccccccCCCCeEEEEecCcccCCCHHHHHHHHHHHHhCCCeEEEE
Q 011531 282 CMTWLNSQPPKSVLYVSFGSLVGLTREQMSELWHGLVNRGQRFLLV 327 (483)
Q Consensus 282 l~~~l~~~~~~~vi~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~ 327 (483)
+.+|+.+...+.++||..+|......+.+..+.++|+.+|..+.++
T Consensus 18 ~~~f~~~~~~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~ 63 (206)
T 3l4e_A 18 FTEFESNLQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEEL 63 (206)
T ss_dssp HHHHSCCCTTCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHcCCCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEE
Confidence 3446544445789999988776555677888999999999886543
No 203
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=31.96 E-value=20 Score=33.17 Aligned_cols=42 Identities=12% Similarity=0.155 Sum_probs=29.5
Q ss_pred CCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCCCchhhhhh
Q 011531 6 VNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTDHNHDLLLR 52 (483)
Q Consensus 6 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~~~~~~~~ 52 (483)
..+||+++..|+.| ..+|..|++.||+|+++..+...+.+.+
T Consensus 18 ~~~kI~IiGaGa~G-----~~~a~~L~~~G~~V~l~~~~~~~~~i~~ 59 (318)
T 3hwr_A 18 QGMKVAIMGAGAVG-----CYYGGMLARAGHEVILIARPQHVQAIEA 59 (318)
T ss_dssp --CEEEEESCSHHH-----HHHHHHHHHTTCEEEEECCHHHHHHHHH
T ss_pred cCCcEEEECcCHHH-----HHHHHHHHHCCCeEEEEEcHhHHHHHHh
Confidence 45899999888766 5678999999999999933223344433
No 204
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=31.81 E-value=2.4e+02 Score=24.07 Aligned_cols=104 Identities=11% Similarity=0.109 Sum_probs=58.1
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhC--CcEEEEEeCCC-chh--hhhhccccccccCCCCCeEEEeCCC-CCCCCccc
Q 011531 8 PHVVLLPYPLQGHIKPMMSLAELLGSA--NFQVTFVNTDH-NHD--LLLRNTDITSFCNRFPNFQFRSIPS-GLPANVIR 81 (483)
Q Consensus 8 ~~il~~~~~~~GH~~p~l~La~~L~~r--GH~V~~~~~~~-~~~--~~~~~~~~~~~~~~~~~v~f~~~p~-~l~~~~~~ 81 (483)
+||+++..+..+ -+.+|.+.+.+. +|+|..+.+.. ... ..++.. ++.+..++. .+.
T Consensus 1 ~ri~vl~Sg~gs---nl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A~~~----------gIp~~~~~~~~~~----- 62 (212)
T 1jkx_A 1 MNIVVLISGNGS---NLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQA----------GIATHTLIASAFD----- 62 (212)
T ss_dssp CEEEEEESSCCH---HHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHHHT----------TCEEEECCGGGCS-----
T ss_pred CEEEEEEECCcH---HHHHHHHHHHcCCCCceEEEEEeCCCchHHHHHHHHc----------CCcEEEeCccccc-----
Confidence 478888877754 367777777776 68887665533 221 222222 466665541 111
Q ss_pred CCCCHHHHHHHHHHhchHHHHHHHHHhhhhhcCCCCccEEEEcCCCCcchHHHHHHcCCCeEEEecc
Q 011531 82 SGLTAKDVFDAMKAVSKPAFRDLLISLREETEQRQSPTCVIADGILCFLTLDVSEELQIPLLALRTH 148 (483)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~D~VI~D~~~~~~~~~~A~~lgIP~v~~~~~ 148 (483)
+ ...+.+.+.+.+++ .+||+||+-.+..-+...+-+.+...++-+.++
T Consensus 63 ---~--------r~~~~~~~~~~l~~--------~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 110 (212)
T 1jkx_A 63 ---S--------REAYDRELIHEIDM--------YAPDVVVLAGFMRILSPAFVSHYAGRLLNIHPS 110 (212)
T ss_dssp ---S--------HHHHHHHHHHHHGG--------GCCSEEEESSCCSCCCHHHHHHTTTSEEEEESS
T ss_pred ---c--------hhhccHHHHHHHHh--------cCCCEEEEeChhhhCCHHHHhhccCCEEEEccC
Confidence 1 11122333333443 579999998774322555666666677777553
No 205
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=31.70 E-value=38 Score=27.55 Aligned_cols=37 Identities=11% Similarity=-0.026 Sum_probs=30.1
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCCCc
Q 011531 7 NPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTDHN 46 (483)
Q Consensus 7 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~~ 46 (483)
..+++++..|+. +.|++.+++.|.++|.+|+++ ....
T Consensus 23 ~~~~llIaGG~G--ItPl~sm~~~l~~~~~~v~l~-g~r~ 59 (158)
T 3lrx_A 23 FGKILAIGAYTG--IVEVYPIAKAWQEIGNDVTTL-HVTF 59 (158)
T ss_dssp CSEEEEEEETTH--HHHHHHHHHHHHHHTCEEEEE-EECB
T ss_pred CCeEEEEEccCc--HHHHHHHHHHHHhcCCcEEEE-EeCC
Confidence 467888877763 999999999999999999998 5343
No 206
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=31.69 E-value=67 Score=27.21 Aligned_cols=37 Identities=11% Similarity=0.120 Sum_probs=29.9
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeC
Q 011531 7 NPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNT 43 (483)
Q Consensus 7 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~ 43 (483)
+..++++..+..|+-.-+..+++.|+++|+.|..+-.
T Consensus 31 ~~p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~ 67 (241)
T 3f67_A 31 PLPIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPEL 67 (241)
T ss_dssp CEEEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECT
T ss_pred CCCEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEecc
Confidence 3456666777778878899999999999999887765
No 207
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=31.51 E-value=2e+02 Score=26.73 Aligned_cols=89 Identities=17% Similarity=0.172 Sum_probs=47.9
Q ss_pred eEEEEecCcccCCCHHHHHHHHHHHHhC-CCeEEEEEcCCccCCCCCCCCCChhhhhhcCCCce-eEEeccCHHHHhccC
Q 011531 293 SVLYVSFGSLVGLTREQMSELWHGLVNR-GQRFLLVVRPDLILGEPGAAETPLAQNEGTEERNR-FIVSWAPQEEVLAHP 370 (483)
Q Consensus 293 ~vi~vs~Gs~~~~~~~~~~~~~~a~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv-~~~~~~p~~~ll~~~ 370 (483)
.+.+|.+|.+.. ...+.++... +..++.++..+ .+..+..... . ...-+-...++|..+
T Consensus 7 rigiIG~G~~g~------~~~~~~l~~~~~~~l~av~d~~------------~~~~~~~a~~-~~~~~~~~~~~~ll~~~ 67 (359)
T 3m2t_A 7 KVGLVGIGAQMQ------ENLLPSLLQMQDIRIVAACDSD------------LERARRVHRF-ISDIPVLDNVPAMLNQV 67 (359)
T ss_dssp EEEEECCSHHHH------HTHHHHHHTCTTEEEEEEECSS------------HHHHGGGGGT-SCSCCEESSHHHHHHHS
T ss_pred eEEEECCCHHHH------HHHHHHHHhCCCcEEEEEEcCC------------HHHHHHHHHh-cCCCcccCCHHHHhcCC
Confidence 477888887652 1245556554 44666566321 1111111111 1 111234578889888
Q ss_pred CccceeeccCchh----HHHHHHhCCceecc-ccc
Q 011531 371 AVGGFLTHGGWNS----TLEGIAAGVPMICW-PQF 400 (483)
Q Consensus 371 ~~~~~ItHgG~gs----~~eal~~GvP~l~~-P~~ 400 (483)
++++++-.-...+ +.+|+.+|+++++= |+.
T Consensus 68 ~vD~V~i~tp~~~H~~~~~~al~aGkhVl~EKPla 102 (359)
T 3m2t_A 68 PLDAVVMAGPPQLHFEMGLLAMSKGVNVFVEKPPC 102 (359)
T ss_dssp CCSEEEECSCHHHHHHHHHHHHHTTCEEEECSCSC
T ss_pred CCCEEEEcCCcHHHHHHHHHHHHCCCeEEEECCCc
Confidence 7777876554433 56677788887652 544
No 208
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=31.48 E-value=33 Score=31.28 Aligned_cols=33 Identities=12% Similarity=-0.001 Sum_probs=27.1
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCC
Q 011531 7 NPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTD 44 (483)
Q Consensus 7 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~ 44 (483)
++||.|+..|..| ..+|+.|+++||+|+++...
T Consensus 15 ~~~I~vIG~G~mG-----~~~A~~l~~~G~~V~~~dr~ 47 (296)
T 3qha_A 15 QLKLGYIGLGNMG-----APMATRMTEWPGGVTVYDIR 47 (296)
T ss_dssp CCCEEEECCSTTH-----HHHHHHHTTSTTCEEEECSS
T ss_pred CCeEEEECcCHHH-----HHHHHHHHHCCCeEEEEeCC
Confidence 5789999877766 46899999999999988653
No 209
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=31.46 E-value=16 Score=31.56 Aligned_cols=32 Identities=22% Similarity=0.271 Sum_probs=24.6
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCC
Q 011531 8 PHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTD 44 (483)
Q Consensus 8 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~ 44 (483)
|||+++..|. --..+|+.|.++||+|+++...
T Consensus 1 M~iiIiG~G~-----~G~~la~~L~~~g~~v~vid~~ 32 (218)
T 3l4b_C 1 MKVIIIGGET-----TAYYLARSMLSRKYGVVIINKD 32 (218)
T ss_dssp CCEEEECCHH-----HHHHHHHHHHHTTCCEEEEESC
T ss_pred CEEEEECCCH-----HHHHHHHHHHhCCCeEEEEECC
Confidence 5677776533 3457899999999999999864
No 210
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=31.33 E-value=35 Score=25.50 Aligned_cols=34 Identities=24% Similarity=0.392 Sum_probs=24.3
Q ss_pred CCCEEEEEcCCCCCCHHHHHHHHHHHHhCC-cEEEEEeCC
Q 011531 6 VNPHVVLLPYPLQGHIKPMMSLAELLGSAN-FQVTFVNTD 44 (483)
Q Consensus 6 ~~~~il~~~~~~~GH~~p~l~La~~L~~rG-H~V~~~~~~ 44 (483)
..++|+++.. |-+ -..+++.|.++| |+|+++...
T Consensus 4 ~~~~v~I~G~---G~i--G~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 4 MRWNICVVGA---GKI--GQMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp TCEEEEEECC---SHH--HHHHHHHHHHCSSEEEEEEESC
T ss_pred CcCeEEEECC---CHH--HHHHHHHHHhCCCceEEEEeCC
Confidence 3467777744 433 357899999999 999887763
No 211
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=31.24 E-value=1.6e+02 Score=29.50 Aligned_cols=26 Identities=15% Similarity=-0.033 Sum_probs=21.3
Q ss_pred CCccEEEEcCCCCcchHHHHHHcCCCeEEE
Q 011531 116 QSPTCVIADGILCFLTLDVSEELQIPLLAL 145 (483)
Q Consensus 116 ~~~D~VI~D~~~~~~~~~~A~~lgIP~v~~ 145 (483)
.+||++|.. .. ...+|+++|||++.+
T Consensus 455 ~~pDl~ig~---~~-~~~~a~k~gIP~~~~ 480 (533)
T 1mio_A 455 LKPDMFFAG---IK-EKFVIQKGGVLSKQL 480 (533)
T ss_dssp HCCSEEEEC---HH-HHHHHHHTTCEEEET
T ss_pred cCCCEEEcc---cc-hhHHHHhcCCCEEEe
Confidence 369999987 34 678899999999964
No 212
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=31.24 E-value=1.2e+02 Score=23.01 Aligned_cols=48 Identities=13% Similarity=0.119 Sum_probs=36.2
Q ss_pred hCCceeccccccchhHHHHHHHHhhccceecCCCCCHHHHHHHHHHHHhH
Q 011531 390 AGVPMICWPQFSDQLVNSRCVSEVWKIGFDMKDTCDGSIIEKLVRDLMEN 439 (483)
Q Consensus 390 ~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~~i~~ll~~ 439 (483)
..+|+|++--..+.....+.+ + .|+--.+.+.++.+.|.++|+++++.
T Consensus 78 ~~~~ii~~s~~~~~~~~~~~~-~-~g~~~~l~kP~~~~~l~~~i~~~~~~ 125 (137)
T 3hdg_A 78 AKPYVIVISAFSEMKYFIKAI-E-LGVHLFLPKPIEPGRLMETLEDFRHI 125 (137)
T ss_dssp CCCEEEECCCCCCHHHHHHHH-H-HCCSEECCSSCCHHHHHHHHHHHHHH
T ss_pred CCCcEEEEecCcChHHHHHHH-h-CCcceeEcCCCCHHHHHHHHHHHHHH
Confidence 367777776666655444444 4 68877787889999999999999985
No 213
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=30.99 E-value=2.5e+02 Score=23.97 Aligned_cols=111 Identities=14% Similarity=0.072 Sum_probs=0.0
Q ss_pred CCCCCEEEEEcCCCCCCHHHHHHHHHHHHhCC--cEEEEEeC-CCchhhhhhccccccccCCCCCeEEEeCCCCCCCCcc
Q 011531 4 SHVNPHVVLLPYPLQGHIKPMMSLAELLGSAN--FQVTFVNT-DHNHDLLLRNTDITSFCNRFPNFQFRSIPSGLPANVI 80 (483)
Q Consensus 4 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rG--H~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~f~~~p~~l~~~~~ 80 (483)
++.++||+++..++.+- +.+|.+.+.+.+ ++|..+.+ .+....+..+... ++.+..++..--..
T Consensus 4 ~m~~~ri~vl~SG~gsn---l~all~~~~~~~l~~~I~~Visn~~~a~~l~~A~~~--------gIp~~~~~~~~~~~-- 70 (209)
T 4ds3_A 4 SMKRNRVVIFISGGGSN---MEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKAEAA--------GIATQVFKRKDFAS-- 70 (209)
T ss_dssp --CCEEEEEEESSCCHH---HHHHHHHHTSTTCSEEEEEEEESCTTCTHHHHHHHT--------TCCEEECCGGGSSS--
T ss_pred cCCCccEEEEEECCcHH---HHHHHHHHHcCCCCcEEEEEEECCcccHHHHHHHHc--------CCCEEEeCccccCC--
Q ss_pred cCCCCHHHHHHHHHHhchHHHHHHHHHhhhhhcCCCCccEEEEcCCCCcchHHHHHHcCCCeEEEecc
Q 011531 81 RSGLTAKDVFDAMKAVSKPAFRDLLISLREETEQRQSPTCVIADGILCFLTLDVSEELQIPLLALRTH 148 (483)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~D~VI~D~~~~~~~~~~A~~lgIP~v~~~~~ 148 (483)
...+.+.+.+.+++ .+||+||+-.+.......+-+.+.-.++-+.++
T Consensus 71 -------------r~~~d~~~~~~l~~--------~~~Dliv~agy~~il~~~~l~~~~~~~iNiHpS 117 (209)
T 4ds3_A 71 -------------KEAHEDAILAALDV--------LKPDIICLAGYMRLLSGRFIAPYEGRILNIHPS 117 (209)
T ss_dssp -------------HHHHHHHHHHHHHH--------HCCSEEEESSCCSCCCHHHHGGGTTCEEEEESS
T ss_pred -------------HHHHHHHHHHHHHh--------cCCCEEEEeccccCcCHHHHhhccCCeEEECCc
No 214
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=30.66 E-value=32 Score=30.94 Aligned_cols=32 Identities=13% Similarity=-0.057 Sum_probs=25.2
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCC
Q 011531 8 PHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTD 44 (483)
Q Consensus 8 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~ 44 (483)
|||+|+..|..| ..+|..|+++||+|+++...
T Consensus 1 m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r~ 32 (291)
T 1ks9_A 1 MKITVLGCGALG-----QLWLTALCKQGHEVQGWLRV 32 (291)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CeEEEECcCHHH-----HHHHHHHHhCCCCEEEEEcC
Confidence 578888766555 47899999999999998653
No 215
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=30.56 E-value=72 Score=27.68 Aligned_cols=39 Identities=15% Similarity=0.038 Sum_probs=23.9
Q ss_pred CCCCCCCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeC
Q 011531 1 MERSHVNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNT 43 (483)
Q Consensus 1 ~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~ 43 (483)
|..+.+.++ ++++.++.| =-.++++.|+++|++|+++..
T Consensus 1 M~~~~~~k~-vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r 39 (241)
T 1dhr_A 1 MAASGEARR-VLVYGGRGA---LGSRCVQAFRARNWWVASIDV 39 (241)
T ss_dssp -----CCCE-EEEETTTSH---HHHHHHHHHHTTTCEEEEEES
T ss_pred CCccCCCCE-EEEECCCcH---HHHHHHHHHHhCCCEEEEEeC
Confidence 444444444 455555432 346889999999999998765
No 216
>2c5m_A CTP synthase; cytidine 5-prime triphosphate synthetase, CTP synthetase, UTP, glutamine, amidotransferase, ligase, phosphorylation; 2.80A {Homo sapiens} PDB: 2vo1_A 3ihl_A*
Probab=30.51 E-value=29 Score=30.90 Aligned_cols=41 Identities=20% Similarity=0.170 Sum_probs=33.3
Q ss_pred CCCEEEEEcCCC---CCCHHHHHHHHHHHHhCCcEEEEEeCCCc
Q 011531 6 VNPHVVLLPYPL---QGHIKPMMSLAELLGSANFQVTFVNTDHN 46 (483)
Q Consensus 6 ~~~~il~~~~~~---~GH~~p~l~La~~L~~rGH~V~~~~~~~~ 46 (483)
.+||.+|++.|. .|-=.-...|+..|.+||++|+.+--+++
T Consensus 21 ~~mKyIfVTGGVvSglGKGi~aaSlG~LLk~rG~~Vt~~KiDPY 64 (294)
T 2c5m_A 21 QSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPY 64 (294)
T ss_dssp CCCEEEEEEECSSTTSCHHHHHHHHHHHHHTTTCCEECCEEECB
T ss_pred eceEEEEEcCccccccchHHHHHHHHHHHHHCCCeeEEEecCCc
Confidence 468999999974 45556778999999999999998876554
No 217
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=30.41 E-value=91 Score=24.20 Aligned_cols=36 Identities=6% Similarity=-0.118 Sum_probs=25.3
Q ss_pred CEEEEE-cCCCCC--CHHHHHHHHHHHHhCCcEE-EEEeC
Q 011531 8 PHVVLL-PYPLQG--HIKPMMSLAELLGSANFQV-TFVNT 43 (483)
Q Consensus 8 ~~il~~-~~~~~G--H~~p~l~La~~L~~rGH~V-~~~~~ 43 (483)
||++|+ +.+.+| .....+.+|..+.+.||+| .++-.
T Consensus 1 mk~~iiv~~~p~~~~~~~~al~~a~a~~~~g~~v~~vff~ 40 (130)
T 2hy5_A 1 MKFALQINEGPYQHQASDSAYQFAKAALEKGHEIFRVFFY 40 (130)
T ss_dssp CEEEEEECSCTTTSTHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred CEEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCeeCEEEEe
Confidence 345433 344444 4566788999999999999 87776
No 218
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=29.42 E-value=1.3e+02 Score=26.44 Aligned_cols=33 Identities=18% Similarity=0.096 Sum_probs=25.9
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCC
Q 011531 9 HVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTD 44 (483)
Q Consensus 9 ~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~ 44 (483)
|.++++.++.| =-.++|+.|+++|.+|.++...
T Consensus 3 K~vlVTGas~G---IG~aia~~la~~Ga~V~~~~~~ 35 (247)
T 3ged_A 3 RGVIVTGGGHG---IGKQICLDFLEAGDKVCFIDID 35 (247)
T ss_dssp CEEEEESTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEecCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 56777877765 3468999999999999987653
No 219
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=29.33 E-value=75 Score=28.18 Aligned_cols=36 Identities=17% Similarity=0.158 Sum_probs=26.5
Q ss_pred CCCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeC
Q 011531 5 HVNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNT 43 (483)
Q Consensus 5 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~ 43 (483)
..+.|.++++.++.| =-.++|++|+++|++|+++..
T Consensus 23 m~~~k~vlITGas~g---IG~a~a~~l~~~G~~V~~~~~ 58 (272)
T 4e3z_A 23 MSDTPVVLVTGGSRG---IGAAVCRLAARQGWRVGVNYA 58 (272)
T ss_dssp -CCSCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred ccCCCEEEEECCCch---HHHHHHHHHHHCCCEEEEEcC
Confidence 334567788877643 357899999999999987754
No 220
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=29.30 E-value=56 Score=29.58 Aligned_cols=39 Identities=23% Similarity=0.292 Sum_probs=23.9
Q ss_pred CCCCCCCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeC
Q 011531 1 MERSHVNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNT 43 (483)
Q Consensus 1 ~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~ 43 (483)
|.+....++|+++.. .|.+ -..|++.|.++||+|+.+.-
T Consensus 1 M~~~~~~~~vlVtGa--tG~i--G~~l~~~L~~~g~~V~~~~r 39 (321)
T 3vps_A 1 MQRNTLKHRILITGG--AGFI--GGHLARALVASGEEVTVLDD 39 (321)
T ss_dssp ------CCEEEEETT--TSHH--HHHHHHHHHHTTCCEEEECC
T ss_pred CCcccCCCeEEEECC--CChH--HHHHHHHHHHCCCEEEEEec
Confidence 544444567766543 2433 45789999999999998865
No 221
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=29.24 E-value=60 Score=24.47 Aligned_cols=38 Identities=11% Similarity=-0.000 Sum_probs=29.2
Q ss_pred CCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeC
Q 011531 6 VNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNT 43 (483)
Q Consensus 6 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~ 43 (483)
+.|||+++|..+.|+-.-.-.+-+.+.++|.++.+-+.
T Consensus 3 ~~mkIlvvC~~G~~TSll~~kl~~~~~~~gi~~~i~~~ 40 (109)
T 2l2q_A 3 GSMNILLVCGAGMSTSMLVQRIEKYAKSKNINATIEAI 40 (109)
T ss_dssp CCEEEEEESSSSCSSCHHHHHHHHHHHHHTCSEEEEEE
T ss_pred CceEEEEECCChHhHHHHHHHHHHHHHHCCCCeEEEEe
Confidence 45899999999888886666777788888987665443
No 222
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A
Probab=29.11 E-value=3.4e+02 Score=25.34 Aligned_cols=62 Identities=11% Similarity=0.074 Sum_probs=38.4
Q ss_pred hCCceeccccccchhHHHHHHHHhhccceecCCCC-CHHHHHHHHHHHHhHhHHHHHHHHHHHHHHH
Q 011531 390 AGVPMICWPQFSDQLVNSRCVSEVWKIGFDMKDTC-DGSIIEKLVRDLMENKREEIMGSTDRVATMA 455 (483)
Q Consensus 390 ~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~-~~~~l~~~i~~ll~~~~~~~~~~a~~l~~~~ 455 (483)
..+|+|++--..|...-.+.+ + .|+--.+.+.+ +.+.|.++|.+++.. ...+...++..+.+
T Consensus 76 ~~~pii~lt~~~~~~~~~~a~-~-~ga~~yl~KP~~~~~~l~~~i~~~~~~--~~l~~e~~~~~~~L 138 (394)
T 3eq2_A 76 SETPIIVLSGAGVMSDAVEAL-R-LGAADYLIKPLEDLAVLEHSVRRALDR--AYLRVENQRYRDKL 138 (394)
T ss_dssp CCCCEEEC---CHHHHHHHHH-H-HTCSEECCSSCSCTHHHHHHHHHHHHH--HHHHHHHHHHHHHH
T ss_pred CCCcEEEEEcCCCHHHHHHHH-h-cChhhEEECCCChHHHHHHHHHHHHhh--hhhhcccccchhhH
Confidence 357888887776665555555 4 68777776666 678999999999875 33444444444433
No 223
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=29.10 E-value=86 Score=23.40 Aligned_cols=33 Identities=18% Similarity=0.360 Sum_probs=22.8
Q ss_pred CCccEEEEcCCCC--cchHHHHHHc-------CCCeEEEecch
Q 011531 116 QSPTCVIADGILC--FLTLDVSEEL-------QIPLLALRTHN 149 (483)
Q Consensus 116 ~~~D~VI~D~~~~--~~~~~~A~~l-------gIP~v~~~~~~ 149 (483)
.+||+||.|...+ . |..+.+++ ++|++.++...
T Consensus 45 ~~~dlvllD~~~p~~~-g~~~~~~l~~~~~~~~~pii~~s~~~ 86 (122)
T 3gl9_A 45 FTPDLIVLXIMMPVMD-GFTVLKKLQEKEEWKRIPVIVLTAKG 86 (122)
T ss_dssp BCCSEEEECSCCSSSC-HHHHHHHHHTSTTTTTSCEEEEESCC
T ss_pred cCCCEEEEeccCCCCc-HHHHHHHHHhcccccCCCEEEEecCC
Confidence 5799999997654 3 45555543 58888877643
No 224
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=29.00 E-value=75 Score=26.84 Aligned_cols=38 Identities=3% Similarity=-0.073 Sum_probs=27.3
Q ss_pred CCCEEEEEcCCCCCCHH----HHHHHHHHHHhCCcEEEEEeCC
Q 011531 6 VNPHVVLLPYPLQGHIK----PMMSLAELLGSANFQVTFVNTD 44 (483)
Q Consensus 6 ~~~~il~~~~~~~GH~~----p~l~La~~L~~rGH~V~~~~~~ 44 (483)
.+++|.+++... +.-. -...|++.|+++||.|++-..+
T Consensus 12 ~~~~I~Vfg~s~-~~~~~~~~~A~~lg~~la~~g~~lv~GGG~ 53 (189)
T 3sbx_A 12 GRWTVAVYCAAA-PTHPELLELAGAVGAAIAARGWTLVWGGGH 53 (189)
T ss_dssp -CCEEEEECCSS-CCCHHHHHHHHHHHHHHHHTTCEEEECCBC
T ss_pred CCeEEEEEEeCC-CCChHHHHHHHHHHHHHHHCCCEEEECCCc
Confidence 458999888765 4433 3567788888999998877654
No 225
>3kxe_C Antitoxin protein PARD-1; complex, TA system, protein binding; 2.60A {Caulobacter crescentus NA1000}
Probab=28.99 E-value=90 Score=22.63 Aligned_cols=52 Identities=17% Similarity=0.141 Sum_probs=32.6
Q ss_pred CHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHhhh
Q 011531 425 DGSIIEKLVRDLMENKREEIMGSTDRVATMARDAVNEGGSSYRNLDGLIEDIRLMAR 481 (483)
Q Consensus 425 ~~~~l~~~i~~ll~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~l~~~l~~~~~ 481 (483)
..+.|+++|+.+.+. ..+.+.+++.+....+.|-+..-+.++++..+.....
T Consensus 30 ~SEviR~~lR~l~~r-----e~~l~~Lr~~l~~G~~Sg~~~~~d~d~v~a~~~~~~~ 81 (88)
T 3kxe_C 30 ASEVIRAGLRLLEEN-----EAKLAALRAALIEGEESGFIEDFDFDAFIEERSRASA 81 (88)
T ss_dssp HHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHTCEESSCCHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHH-----hHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHh
Confidence 346666666666542 2355668888877766565433578999988876543
No 226
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=28.98 E-value=55 Score=30.00 Aligned_cols=39 Identities=10% Similarity=-0.043 Sum_probs=29.8
Q ss_pred CCEEEEEcCCCCCC----HHHHHHHHHHHHhCCcEEEEEeCCC
Q 011531 7 NPHVVLLPYPLQGH----IKPMMSLAELLGSANFQVTFVNTDH 45 (483)
Q Consensus 7 ~~~il~~~~~~~GH----~~p~l~La~~L~~rGH~V~~~~~~~ 45 (483)
++||+++..+..+- +.-...++++|.++||+|+.+.+..
T Consensus 13 ~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~v~~i~~~~ 55 (317)
T 4eg0_A 13 FGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDPAE 55 (317)
T ss_dssp GCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTTT
T ss_pred cceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 46888887764432 3467899999999999999998643
No 227
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=28.68 E-value=55 Score=28.25 Aligned_cols=33 Identities=12% Similarity=0.164 Sum_probs=25.3
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeC
Q 011531 8 PHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNT 43 (483)
Q Consensus 8 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~ 43 (483)
+|.++++.++.| =-.++|++|+++|++|+++..
T Consensus 2 ~k~vlITGas~g---IG~~ia~~l~~~G~~V~~~~r 34 (235)
T 3l77_A 2 MKVAVITGASRG---IGEAIARALARDGYALALGAR 34 (235)
T ss_dssp CCEEEEESCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 466777776643 346889999999999988765
No 228
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=28.46 E-value=47 Score=34.78 Aligned_cols=110 Identities=11% Similarity=0.046 Sum_probs=73.2
Q ss_pred EeccCHHHHhccCCccceeeccCchhHHHHHHhCCceeccccccchhHHHHHHHHhhccceec----C--CCCCHHHHHH
Q 011531 358 VSWAPQEEVLAHPAVGGFLTHGGWNSTLEGIAAGVPMICWPQFSDQLVNSRCVSEVWKIGFDM----K--DTCDGSIIEK 431 (483)
Q Consensus 358 ~~~~p~~~ll~~~~~~~~ItHgG~gs~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l----~--~~~~~~~l~~ 431 (483)
.++.+-.++|..+++ +||=- .+.+.|.+..++|+|....-.|+...- ..|.=..+ + -.-+.++|.+
T Consensus 604 ~~~~di~~ll~~aD~--lITDy-SSv~fD~~~l~kPiif~~~D~~~Y~~~-----~rg~y~d~~~~~pg~~~~~~~eL~~ 675 (729)
T 3l7i_A 604 SNYNDVSELFLISDC--LITDY-SSVMFDYGILKRPQFFFAYDIDKYDKG-----LRGFYMNYMEDLPGPIYTEPYGLAK 675 (729)
T ss_dssp TTCSCHHHHHHTCSE--EEESS-CTHHHHHGGGCCCEEEECTTTTTTTSS-----CCSBSSCTTSSSSSCEESSHHHHHH
T ss_pred CCCcCHHHHHHHhCE--EEeec-hHHHHhHHhhCCCEEEecCCHHHHhhc-----cCCcccChhHhCCCCeECCHHHHHH
Confidence 356677888977777 99874 468899999999999987766665321 02332222 1 1358899999
Q ss_pred HHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 011531 432 LVRDLMENKREEIMGSTDRVATMARDAVNEGGSSYRNLDGLIEDIR 477 (483)
Q Consensus 432 ~i~~ll~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~l~~~l~ 477 (483)
+|.....+. ..++++.+++.+.+... ..|.++...++.+++...
T Consensus 676 ~i~~~~~~~-~~~~~~~~~~~~~~~~~-~dg~as~ri~~~i~~~~~ 719 (729)
T 3l7i_A 676 ELKNLDKVQ-QQYQEKIDAFYDRFCSV-DNGKASQYIGDLIHKDIK 719 (729)
T ss_dssp HHTTHHHHH-HHTHHHHHHHHHHHSTT-CCSCHHHHHHHHHHHHHH
T ss_pred HHhhhhccc-hhHHHHHHHHHHHhCCc-cCChHHHHHHHHHHhcCc
Confidence 999988721 67888888888888653 335444444444444433
No 229
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=28.44 E-value=70 Score=23.91 Aligned_cols=47 Identities=15% Similarity=0.128 Sum_probs=34.6
Q ss_pred hCCceeccccccchhHHHHHHHHhhccceecCCCCCHHHHHHHHHHHHh
Q 011531 390 AGVPMICWPQFSDQLVNSRCVSEVWKIGFDMKDTCDGSIIEKLVRDLME 438 (483)
Q Consensus 390 ~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~~i~~ll~ 438 (483)
..+|++++--..+...-.+.. + .|+--.+.+.++.++|.++|+++++
T Consensus 75 ~~~pii~~s~~~~~~~~~~~~-~-~Ga~~~l~KP~~~~~L~~~i~~~l~ 121 (122)
T 3gl9_A 75 KRIPVIVLTAKGGEEDESLAL-S-LGARKVMRKPFSPSQFIEEVKHLLN 121 (122)
T ss_dssp TTSCEEEEESCCSHHHHHHHH-H-TTCSEEEESSCCHHHHHHHHHHHHC
T ss_pred cCCCEEEEecCCchHHHHHHH-h-cChhhhccCCCCHHHHHHHHHHHhc
Confidence 357888877665554444444 4 7887777788999999999999875
No 230
>1zu4_A FTSY; GTPase, signal recognition particle, SRP, receptor, protein transport; 1.95A {Mycoplasma mycoides} PDB: 1zu5_A
Probab=28.41 E-value=1.9e+02 Score=26.54 Aligned_cols=40 Identities=13% Similarity=0.199 Sum_probs=32.9
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCCCch
Q 011531 8 PHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTDHNH 47 (483)
Q Consensus 8 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~~~ 47 (483)
.-|+++..++-|-..-...||..|+..|.+|.++..+.+.
T Consensus 106 ~vI~ivG~~G~GKTT~~~~LA~~l~~~g~kVllid~D~~r 145 (320)
T 1zu4_A 106 NIFMLVGVNGTGKTTSLAKMANYYAELGYKVLIAAADTFR 145 (320)
T ss_dssp EEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCCSC
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcc
Confidence 3456666678899999999999999999999999886543
No 231
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=28.34 E-value=22 Score=33.21 Aligned_cols=39 Identities=13% Similarity=0.075 Sum_probs=29.6
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCCCchhhh
Q 011531 7 NPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTDHNHDLL 50 (483)
Q Consensus 7 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~~~~~~ 50 (483)
.|||+++..|+.| ..+|..|+++||+|+++..+...+.+
T Consensus 3 ~mkI~IiGaG~~G-----~~~a~~L~~~g~~V~~~~r~~~~~~~ 41 (335)
T 3ghy_A 3 LTRICIVGAGAVG-----GYLGARLALAGEAINVLARGATLQAL 41 (335)
T ss_dssp CCCEEEESCCHHH-----HHHHHHHHHTTCCEEEECCHHHHHHH
T ss_pred CCEEEEECcCHHH-----HHHHHHHHHCCCEEEEEEChHHHHHH
Confidence 5799999877665 56789999999999999874333333
No 232
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=28.34 E-value=27 Score=32.20 Aligned_cols=38 Identities=11% Similarity=0.135 Sum_probs=25.3
Q ss_pred CCCCCCCEEEEEcCCCCCCHHHHHHHHHHHHhCCc--EEEEEeCC
Q 011531 2 ERSHVNPHVVLLPYPLQGHIKPMMSLAELLGSANF--QVTFVNTD 44 (483)
Q Consensus 2 ~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH--~V~~~~~~ 44 (483)
|++++.|||+++..|..|- .+|..|+.+|| +|+++...
T Consensus 2 ~~~~~~mkI~IiGaG~vG~-----~~a~~l~~~g~~~~V~l~d~~ 41 (319)
T 1lld_A 2 ETTVKPTKLAVIGAGAVGS-----TLAFAAAQRGIAREIVLEDIA 41 (319)
T ss_dssp -----CCEEEEECCSHHHH-----HHHHHHHHTTCCSEEEEECSS
T ss_pred CcCCCCCEEEEECCCHHHH-----HHHHHHHhCCCCCEEEEEeCC
Confidence 4566779999987644332 37778999999 99988764
No 233
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=28.23 E-value=55 Score=29.63 Aligned_cols=33 Identities=12% Similarity=0.042 Sum_probs=25.6
Q ss_pred CCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeC
Q 011531 6 VNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNT 43 (483)
Q Consensus 6 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~ 43 (483)
+++||.|+..|..|. .+++.|.+.||+|+++..
T Consensus 3 ~~~~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~ 35 (301)
T 3cky_A 3 KSIKIGFIGLGAMGK-----PMAINLLKEGVTVYAFDL 35 (301)
T ss_dssp -CCEEEEECCCTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEECccHHHH-----HHHHHHHHCCCeEEEEeC
Confidence 468999998776664 468889999999987654
No 234
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=28.13 E-value=1.1e+02 Score=22.14 Aligned_cols=34 Identities=9% Similarity=-0.013 Sum_probs=25.6
Q ss_pred CCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeC
Q 011531 6 VNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNT 43 (483)
Q Consensus 6 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~ 43 (483)
+..+|+++|..+ ......++.|.+.||+|..+..
T Consensus 55 ~~~~ivvyC~~g----~rs~~a~~~L~~~G~~v~~l~G 88 (100)
T 3foj_A 55 DNETYYIICKAG----GRSAQVVQYLEQNGVNAVNVEG 88 (100)
T ss_dssp TTSEEEEECSSS----HHHHHHHHHHHTTTCEEEEETT
T ss_pred CCCcEEEEcCCC----chHHHHHHHHHHCCCCEEEecc
Confidence 446888888543 4567889999999998887654
No 235
>3lyh_A Cobalamin (vitamin B12) biosynthesis CBIX protein; structural genomics, joint center for structural genomics, protein structure initiative; HET: MSE; 1.60A {Marinobacter aquaeolei}
Probab=28.10 E-value=1.7e+02 Score=22.35 Aligned_cols=37 Identities=16% Similarity=0.173 Sum_probs=23.8
Q ss_pred CCeEEEEecCcccCCCHHHHHHHHHHHHhCCCeEEEE
Q 011531 291 PKSVLYVSFGSLVGLTREQMSELWHGLVNRGQRFLLV 327 (483)
Q Consensus 291 ~~~vi~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~ 327 (483)
++.+|+++.||.-......+..+.+.++.....+.+.
T Consensus 5 ~~alllv~HGS~~~~~~~~~~~l~~~l~~~~~~V~~a 41 (126)
T 3lyh_A 5 PHQIILLAHGSSDARWCETFEKLAEPTVESIENAAIA 41 (126)
T ss_dssp CEEEEEEECCCSCHHHHHHHHHHHHHHHHHSTTCEEE
T ss_pred CcEEEEEeCCCCCHHHHHHHHHHHHHHHhhcCCEEEE
Confidence 4679999999975433455667777776543344333
No 236
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=27.94 E-value=81 Score=24.74 Aligned_cols=33 Identities=15% Similarity=0.284 Sum_probs=24.2
Q ss_pred CCccEEEEcCCCC--cchHHHHHHc-------CCCeEEEecch
Q 011531 116 QSPTCVIADGILC--FLTLDVSEEL-------QIPLLALRTHN 149 (483)
Q Consensus 116 ~~~D~VI~D~~~~--~~~~~~A~~l-------gIP~v~~~~~~ 149 (483)
.+||+||.|...+ . |..+++++ .+|++.++...
T Consensus 56 ~~~DlillD~~MP~md-G~el~~~ir~~~~~~~ipvI~lTa~~ 97 (134)
T 3to5_A 56 GDFDFVVTDWNMPGMQ-GIDLLKNIRADEELKHLPVLMITAEA 97 (134)
T ss_dssp HCCSEEEEESCCSSSC-HHHHHHHHHHSTTTTTCCEEEEESSC
T ss_pred CCCCEEEEcCCCCCCC-HHHHHHHHHhCCCCCCCeEEEEECCC
Confidence 4799999998766 4 56666654 58988876644
No 237
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=27.90 E-value=70 Score=28.98 Aligned_cols=39 Identities=21% Similarity=0.284 Sum_probs=30.2
Q ss_pred CCCCEEEEEcCCCCCCHHHH--HHHHHHHHhCC-cEEEEEeCC
Q 011531 5 HVNPHVVLLPYPLQGHIKPM--MSLAELLGSAN-FQVTFVNTD 44 (483)
Q Consensus 5 ~~~~~il~~~~~~~GH~~p~--l~La~~L~~rG-H~V~~~~~~ 44 (483)
.++.|+|++.... +|-.+. ..|++.|.+.| ++|++...+
T Consensus 2 ~~~~kvLiv~G~~-~H~~~~~~~~l~~~l~~~g~f~V~~~~d~ 43 (281)
T 4e5v_A 2 RKPIKTLLITGQN-NHNWQVSHVVLKQILENSGRFDVDFVISP 43 (281)
T ss_dssp CCCEEEEEEESCC-SSCHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred CCceEEEEEcCCC-CCChHHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 4689999995544 886554 57788888898 999998764
No 238
>2ffh_A Protein (FFH); SRP54, signal recognition particle, GTPase, M domain, RNA-binding, signal sequence-binding, helix-turn-helix, protein targeting; 3.20A {Thermus aquaticus} SCOP: a.24.13.1 a.36.1.1 c.37.1.10 PDB: 2iy3_A
Probab=27.68 E-value=79 Score=30.61 Aligned_cols=41 Identities=15% Similarity=0.074 Sum_probs=33.7
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCCCchh
Q 011531 8 PHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTDHNHD 48 (483)
Q Consensus 8 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~~~~ 48 (483)
..|+++..++-|-..-...||..|+.+|++|.++..+....
T Consensus 99 ~vi~i~G~~GsGKTT~~~~LA~~l~~~g~~Vllvd~D~~r~ 139 (425)
T 2ffh_A 99 NLWFLVGLQGSGKTTTAAKLALYYKGKGRRPLLVAADTQRP 139 (425)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCSSCH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEeeccccCc
Confidence 34566666788999999999999999999999999865543
No 239
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=27.65 E-value=35 Score=31.69 Aligned_cols=34 Identities=15% Similarity=0.125 Sum_probs=27.6
Q ss_pred CCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCC
Q 011531 6 VNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTD 44 (483)
Q Consensus 6 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~ 44 (483)
-.+||.|+..|..| ..+|..|+++||+|+++...
T Consensus 13 ~~~kI~iIG~G~mG-----~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 13 MEMRFFVLGAGSWG-----TVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred cCCcEEEECcCHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 35899999887655 57899999999999988763
No 240
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=27.58 E-value=1.1e+02 Score=25.76 Aligned_cols=36 Identities=14% Similarity=0.330 Sum_probs=27.2
Q ss_pred CEE-EEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeC
Q 011531 8 PHV-VLLPYPLQGHIKPMMSLAELLGSANFQVTFVNT 43 (483)
Q Consensus 8 ~~i-l~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~ 43 (483)
.|| +++..+...+-.....+++.|+++|++|.+++.
T Consensus 107 ~riiil~~~~~~~~~~~~~~~a~~lk~~gi~v~~Ig~ 143 (192)
T 2x5n_A 107 QRIVAFVGSPIVEDEKNLIRLAKRMKKNNVAIDIIHI 143 (192)
T ss_dssp EEEEEEECSCCSSCHHHHHHHHHHHHHTTEEEEEEEE
T ss_pred ceEEEEEECCCCCCchhHHHHHHHHHHCCCEEEEEEe
Confidence 344 455555556677788999999999999998874
No 241
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=27.33 E-value=16 Score=36.02 Aligned_cols=33 Identities=30% Similarity=0.342 Sum_probs=27.9
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCC
Q 011531 7 NPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTD 44 (483)
Q Consensus 7 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~ 44 (483)
.|||+++..|-.| ..||+.|.++||+|+++-.+
T Consensus 3 ~M~iiI~G~G~vG-----~~la~~L~~~~~~v~vId~d 35 (461)
T 4g65_A 3 AMKIIILGAGQVG-----GTLAENLVGENNDITIVDKD 35 (461)
T ss_dssp CEEEEEECCSHHH-----HHHHHHTCSTTEEEEEEESC
T ss_pred cCEEEEECCCHHH-----HHHHHHHHHCCCCEEEEECC
Confidence 6899999887655 46999999999999999764
No 242
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=27.13 E-value=36 Score=30.99 Aligned_cols=32 Identities=16% Similarity=0.204 Sum_probs=25.4
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeC
Q 011531 7 NPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNT 43 (483)
Q Consensus 7 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~ 43 (483)
.|||+|+..|..| ..+|..|+++||+|+++..
T Consensus 3 ~m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r 34 (316)
T 2ew2_A 3 AMKIAIAGAGAMG-----SRLGIMLHQGGNDVTLIDQ 34 (316)
T ss_dssp -CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCeEEEECcCHHH-----HHHHHHHHhCCCcEEEEEC
Confidence 3789998776554 4678999999999998875
No 243
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=27.09 E-value=37 Score=31.70 Aligned_cols=32 Identities=16% Similarity=0.077 Sum_probs=25.7
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeC
Q 011531 7 NPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNT 43 (483)
Q Consensus 7 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~ 43 (483)
.|||+++..|..| ..+|..|+++||+|+++..
T Consensus 4 ~mki~iiG~G~~G-----~~~a~~L~~~g~~V~~~~r 35 (359)
T 1bg6_A 4 SKTYAVLGLGNGG-----HAFAAYLALKGQSVLAWDI 35 (359)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred cCeEEEECCCHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 5899999776555 4578899999999998865
No 244
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=27.04 E-value=74 Score=28.15 Aligned_cols=40 Identities=23% Similarity=0.215 Sum_probs=27.9
Q ss_pred CCCCCCCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeC
Q 011531 1 MERSHVNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNT 43 (483)
Q Consensus 1 ~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~ 43 (483)
|....-+-|.++++.++.| =-.++|+.|+++|++|+++..
T Consensus 1 M~~~~l~~k~~lVTGas~G---IG~aia~~l~~~G~~V~~~~r 40 (265)
T 3lf2_A 1 MKPYDLSEAVAVVTGGSSG---IGLATVELLLEAGAAVAFCAR 40 (265)
T ss_dssp --CCCCTTCEEEEETCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCccCcCCCEEEEeCCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 3333334567778877653 356889999999999988765
No 245
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=26.96 E-value=15 Score=33.68 Aligned_cols=40 Identities=13% Similarity=0.035 Sum_probs=29.6
Q ss_pred CCCCCCCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCCC
Q 011531 1 MERSHVNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTDH 45 (483)
Q Consensus 1 ~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~ 45 (483)
|+...+..+|+++..|.-| +..|..|+++|++|+++-...
T Consensus 1 M~~~~~~~~vvIIG~G~aG-----l~aA~~l~~~g~~v~lie~~~ 40 (332)
T 3lzw_A 1 MREDTKVYDITIIGGGPVG-----LFTAFYGGMRQASVKIIESLP 40 (332)
T ss_dssp CEEEEEEEEEEEECCSHHH-----HHHHHHHHHTTCCEEEECSSS
T ss_pred CCCCCccceEEEECCCHHH-----HHHHHHHHHCCCCEEEEEcCC
Confidence 4433345688888877544 688999999999999997643
No 246
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=26.95 E-value=44 Score=28.63 Aligned_cols=33 Identities=12% Similarity=0.189 Sum_probs=25.0
Q ss_pred CCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeC
Q 011531 6 VNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNT 43 (483)
Q Consensus 6 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~ 43 (483)
..+||.|+..|..| ..+|..|+++||+|+++..
T Consensus 18 ~~~~I~iiG~G~mG-----~~la~~l~~~g~~V~~~~~ 50 (209)
T 2raf_A 18 QGMEITIFGKGNMG-----QAIGHNFEIAGHEVTYYGS 50 (209)
T ss_dssp --CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECT
T ss_pred CCCEEEEECCCHHH-----HHHHHHHHHCCCEEEEEcC
Confidence 35788888765544 6789999999999998864
No 247
>3ahc_A Phosphoketolase, xylulose 5-phosphate/fructose 6-phosphate phospho; thiamine diphosphate-dependent enzyme, alpha-beta fold; HET: TPP 2PE; 1.70A {Bifidobacterium breve} PDB: 3ahd_A* 3ahe_A* 3ahf_A* 3ahj_A* 3ahi_A* 3ahh_A* 3ahg_A* 3ai7_A*
Probab=26.94 E-value=4.7e+02 Score=27.68 Aligned_cols=81 Identities=12% Similarity=0.096 Sum_probs=48.0
Q ss_pred eeeccCchhHHHHHHhC-Cc--e--eccccccchhHHHHHHHHhhccceecCCCCCHHHHHHHHHHHHh-HhHHHHHHHH
Q 011531 375 FLTHGGWNSTLEGIAAG-VP--M--ICWPQFSDQLVNSRCVSEVWKIGFDMKDTCDGSIIEKLVRDLME-NKREEIMGST 448 (483)
Q Consensus 375 ~ItHgG~gs~~eal~~G-vP--~--l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~~i~~ll~-~~~~~~~~~a 448 (483)
|+.||--+.|.|.++-. .| + +.+|-+++-..-...+ ++ ..++.+.|.+++.+++. ++...+++..
T Consensus 727 ~~~gGlgsaV~ell~~r~~~~~l~v~G~~d~G~tgtp~eLl-~~--------~gld~~~Iv~~a~~~l~~~~~~~~~~~~ 797 (845)
T 3ahc_A 727 FAYHSYAQDVRGLIYDRPNHDNFHVVGYKEQGSTTTPFDMV-RV--------NDMDRYALQAAALKLIDADKYADKIDEL 797 (845)
T ss_dssp EEESSCHHHHHHHTTTSTTGGGEEEECCCSCCCSCCHHHHH-HT--------TTCSHHHHHHHHHHHHHTTTTHHHHHHH
T ss_pred eeecCcHHHHHHHHHhCCCCceEEEEeccCCCCCCCHHHHH-HH--------hCcCHHHHHHHHHHHcchhhHHHHHHHH
Confidence 55676667777777665 33 3 4444444322233344 33 56899999999998886 3334455555
Q ss_pred HHHHHHHHHHHhcCCC
Q 011531 449 DRVATMARDAVNEGGS 464 (483)
Q Consensus 449 ~~l~~~~~~~~~~gg~ 464 (483)
+....+.++++.+.|.
T Consensus 798 ~~~~~~~~~~~~~~g~ 813 (845)
T 3ahc_A 798 NAFRKKAFQFAVDNGY 813 (845)
T ss_dssp HHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHhCC
Confidence 5555555555555453
No 248
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=26.87 E-value=27 Score=31.25 Aligned_cols=50 Identities=22% Similarity=0.350 Sum_probs=35.4
Q ss_pred cceeeccCchhHHHHHHh---CCceeccccccchhHHHHHHHHhhccceecCCCCCHHHHHHHHHHHHh
Q 011531 373 GGFLTHGGWNSTLEGIAA---GVPMICWPQFSDQLVNSRCVSEVWKIGFDMKDTCDGSIIEKLVRDLME 438 (483)
Q Consensus 373 ~~~ItHgG~gs~~eal~~---GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~~i~~ll~ 438 (483)
+++|+=||=||+.+++.. ++|++.++... . |.. ..+.++++.+++.++++
T Consensus 43 D~vv~~GGDGTll~~a~~~~~~~PilGIn~G~------------~--Gfl--~~~~~~~~~~al~~i~~ 95 (258)
T 1yt5_A 43 DLIVVVGGDGTVLKAAKKAADGTPMVGFKAGR------------L--GFL--TSYTLDEIDRFLEDLRN 95 (258)
T ss_dssp SEEEEEECHHHHHHHHTTBCTTCEEEEEESSS------------C--CSS--CCBCGGGHHHHHHHHHT
T ss_pred CEEEEEeCcHHHHHHHHHhCCCCCEEEEECCC------------C--Ccc--CcCCHHHHHHHHHHHHc
Confidence 349999999999999887 88888887421 1 111 12456777777777776
No 249
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=26.83 E-value=31 Score=31.78 Aligned_cols=31 Identities=16% Similarity=0.185 Sum_probs=23.8
Q ss_pred hccCCccceeeccCchhHHHHHHh----CCceecccc
Q 011531 367 LAHPAVGGFLTHGGWNSTLEGIAA----GVPMICWPQ 399 (483)
Q Consensus 367 l~~~~~~~~ItHgG~gs~~eal~~----GvP~l~~P~ 399 (483)
...+++ +|.-||-||+.+++.. ++|++.++.
T Consensus 73 ~~~~d~--vi~~GGDGT~l~a~~~~~~~~~pvlgi~~ 107 (307)
T 1u0t_A 73 ADGCEL--VLVLGGDGTFLRAAELARNASIPVLGVNL 107 (307)
T ss_dssp ---CCC--EEEEECHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred ccCCCE--EEEEeCCHHHHHHHHHhccCCCCEEEEeC
Confidence 334455 9999999999999765 899998874
No 250
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=26.83 E-value=1.1e+02 Score=24.19 Aligned_cols=38 Identities=11% Similarity=0.130 Sum_probs=27.1
Q ss_pred CCCEEEEEcC-CCCCCHHH--HHHHHHHHHhCCcEE-EEEeC
Q 011531 6 VNPHVVLLPY-PLQGHIKP--MMSLAELLGSANFQV-TFVNT 43 (483)
Q Consensus 6 ~~~~il~~~~-~~~GH~~p--~l~La~~L~~rGH~V-~~~~~ 43 (483)
..||++|+-. +-+|+-.. .+.+|..+.+.||+| .++-.
T Consensus 11 ~~~~~~ivv~~~Pyg~~~a~~Al~~A~aala~g~eV~~VFf~ 52 (140)
T 2d1p_A 11 GSMRFAIVVTGPAYGTQQASSAFQFAQALIADGHELSSVFFY 52 (140)
T ss_dssp CCCEEEEEECSCSSSSSHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred CceEEEEEEcCCCCCcHHHHHHHHHHHHHHHCCCccCEEEEe
Confidence 3588855544 55665555 467799999999999 76665
No 251
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=26.83 E-value=1.2e+02 Score=22.97 Aligned_cols=41 Identities=12% Similarity=0.053 Sum_probs=31.7
Q ss_pred CCCCCCEEEEEcCCCCCCHHH-HHHHHHHHHhCCcEEEEEeC
Q 011531 3 RSHVNPHVVLLPYPLQGHIKP-MMSLAELLGSANFQVTFVNT 43 (483)
Q Consensus 3 ~~~~~~~il~~~~~~~GH~~p-~l~La~~L~~rGH~V~~~~~ 43 (483)
...+.+||+++|..+.|.-.- ...|-+.+.+.|.++.+-..
T Consensus 17 ~~~~~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~~~V~~~ 58 (113)
T 1tvm_A 17 FQGSKRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQC 58 (113)
T ss_dssp CSCSSEEEEEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred hcccccEEEEECCCCHHHHHHHHHHHHHHHHHcCCeEEEEEe
Confidence 344567899999999999885 67777888889998655443
No 252
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=26.75 E-value=3.4e+02 Score=24.19 Aligned_cols=31 Identities=16% Similarity=0.113 Sum_probs=21.3
Q ss_pred CccEEEEcCCCCcch---HHHHHHcCCCeEEEec
Q 011531 117 SPTCVIADGILCFLT---LDVSEELQIPLLALRT 147 (483)
Q Consensus 117 ~~D~VI~D~~~~~~~---~~~A~~lgIP~v~~~~ 147 (483)
++|.||..+...... ...+...|||+|.+..
T Consensus 59 ~vdgiIi~~~~~~~~~~~~~~~~~~giPvV~~~~ 92 (330)
T 3uug_A 59 GVKVLVIASIDGTTLSDVLKQAGEQGIKVIAYDR 92 (330)
T ss_dssp TCSEEEECCSSGGGGHHHHHHHHHTTCEEEEESS
T ss_pred CCCEEEEEcCCchhHHHHHHHHHHCCCCEEEECC
Confidence 699999887653201 3456677999999743
No 253
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=26.62 E-value=88 Score=26.32 Aligned_cols=33 Identities=12% Similarity=0.113 Sum_probs=23.3
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCC
Q 011531 8 PHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTD 44 (483)
Q Consensus 8 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~ 44 (483)
|||+++. +.|.+ -..|+++|.++||+|+.+.-.
T Consensus 1 MkvlVtG--atG~i--G~~l~~~L~~~g~~V~~~~R~ 33 (221)
T 3ew7_A 1 MKIGIIG--ATGRA--GSRILEEAKNRGHEVTAIVRN 33 (221)
T ss_dssp CEEEEET--TTSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CeEEEEc--CCchh--HHHHHHHHHhCCCEEEEEEcC
Confidence 4665543 33433 357899999999999988764
No 254
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=26.56 E-value=2.6e+02 Score=27.16 Aligned_cols=26 Identities=15% Similarity=0.349 Sum_probs=22.0
Q ss_pred CCccEEEEcCCCCcchHHHHHHcCCCeEEE
Q 011531 116 QSPTCVIADGILCFLTLDVSEELQIPLLAL 145 (483)
Q Consensus 116 ~~~D~VI~D~~~~~~~~~~A~~lgIP~v~~ 145 (483)
.+||++|.+. . ...+|+++|||++.+
T Consensus 384 ~~pDl~ig~~---~-~~~~a~k~gip~~~~ 409 (458)
T 1mio_B 384 EGVDLLISNT---Y-GKFIAREENIPFVRF 409 (458)
T ss_dssp SCCSEEEESG---G-GHHHHHHHTCCEEEC
T ss_pred cCCCEEEeCc---c-hHHHHHHcCCCEEEe
Confidence 5799999884 3 678899999999986
No 255
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=26.49 E-value=67 Score=29.19 Aligned_cols=33 Identities=6% Similarity=-0.017 Sum_probs=23.2
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCCC
Q 011531 9 HVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTDH 45 (483)
Q Consensus 9 ~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~ 45 (483)
+|+++. +.|.+ -..|+++|.++||+|+.++-..
T Consensus 13 ~ilVtG--atG~i--G~~l~~~L~~~g~~V~~l~R~~ 45 (318)
T 2r6j_A 13 KILIFG--GTGYI--GNHMVKGSLKLGHPTYVFTRPN 45 (318)
T ss_dssp CEEEET--TTSTT--HHHHHHHHHHTTCCEEEEECTT
T ss_pred eEEEEC--CCchH--HHHHHHHHHHCCCcEEEEECCC
Confidence 555553 33444 3578999999999999887643
No 256
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=26.46 E-value=36 Score=32.12 Aligned_cols=34 Identities=18% Similarity=0.183 Sum_probs=28.4
Q ss_pred CCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCC
Q 011531 6 VNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTD 44 (483)
Q Consensus 6 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~ 44 (483)
..|||.|+..|..| ..+|..|+++||+|++....
T Consensus 28 ~~mkI~VIGaG~mG-----~alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 28 FKHPIAILGAGSWG-----TALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp CCSCEEEECCSHHH-----HHHHHHHHTTTCCEEEECSC
T ss_pred cCCeEEEECccHHH-----HHHHHHHHHCCCeEEEEeCC
Confidence 35899999887765 56899999999999998874
No 257
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=26.28 E-value=3.7e+02 Score=24.43 Aligned_cols=108 Identities=12% Similarity=0.154 Sum_probs=61.8
Q ss_pred CCCCCEEEEEcCCCCCCHHHHHHHHHHHHhC--CcEEEEEeC-CCchhhhhhccccccccCCCCCeEEEeCCCCCCCCcc
Q 011531 4 SHVNPHVVLLPYPLQGHIKPMMSLAELLGSA--NFQVTFVNT-DHNHDLLLRNTDITSFCNRFPNFQFRSIPSGLPANVI 80 (483)
Q Consensus 4 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~r--GH~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~f~~~p~~l~~~~~ 80 (483)
..+++||+++..+. || -+.+|.++-.+. +.+|..+.+ .+....+++.. ++.+..+|....
T Consensus 102 ~~~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~I~~Visn~~~~~~~A~~~----------gIp~~~~~~~~~---- 164 (302)
T 3o1l_A 102 SAQKKRVVLMASRE-SH--CLADLLHRWHSDELDCDIACVISNHQDLRSMVEWH----------DIPYYHVPVDPK---- 164 (302)
T ss_dssp TTSCCEEEEEECSC-CH--HHHHHHHHHHTTCSCSEEEEEEESSSTTHHHHHTT----------TCCEEECCCCSS----
T ss_pred cCCCcEEEEEEeCC-ch--hHHHHHHHHHCCCCCcEEEEEEECcHHHHHHHHHc----------CCCEEEcCCCcC----
Confidence 45678999988777 55 356666655443 467776655 33334444433 477777663110
Q ss_pred cCCCCHHHHHHHHHHhchHHHHHHHHHhhhhhcCCCCccEEEEcCCCCcchHHHHHHcCCCeEEEecc
Q 011531 81 RSGLTAKDVFDAMKAVSKPAFRDLLISLREETEQRQSPTCVIADGILCFLTLDVSEELQIPLLALRTH 148 (483)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~D~VI~D~~~~~~~~~~A~~lgIP~v~~~~~ 148 (483)
.. ....+.+.+++++ .++|+||.-.+.-.+...+-+.+.-.++-+.++
T Consensus 165 ---~r---------~~~~~~~~~~l~~--------~~~DliVlagym~IL~~~~l~~~~~~~INiHpS 212 (302)
T 3o1l_A 165 ---DK---------EPAFAEVSRLVGH--------HQADVVVLARYMQILPPQLCREYAHQVINIHHS 212 (302)
T ss_dssp ---CC---------HHHHHHHHHHHHH--------TTCSEEEESSCCSCCCTTHHHHTTTCEEEEESS
T ss_pred ---CH---------HHHHHHHHHHHHH--------hCCCEEEHhHhhhhcCHHHHhhhhCCeEEeCcc
Confidence 00 0012334444555 579999998775332555666666667776553
No 258
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=26.27 E-value=1.6e+02 Score=22.09 Aligned_cols=48 Identities=4% Similarity=0.040 Sum_probs=34.7
Q ss_pred hCCceeccccccchhHHHHHHHHhhccceecCCCCCHHHHHHHHHHHHhH
Q 011531 390 AGVPMICWPQFSDQLVNSRCVSEVWKIGFDMKDTCDGSIIEKLVRDLMEN 439 (483)
Q Consensus 390 ~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~~i~~ll~~ 439 (483)
..+|+|++--..+.......+ + .|+--.+.+.++.++|.++|++++..
T Consensus 74 ~~~~ii~~s~~~~~~~~~~~~-~-~ga~~~l~KP~~~~~L~~~i~~~~~~ 121 (132)
T 3crn_A 74 PGMKKIMVTGYASLENSVFSL-N-AGADAYIMKPVNPRDLLEKIKEKLDE 121 (132)
T ss_dssp TTSEEEEEESCCCHHHHHHHH-H-TTCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCCcEEEEeccccHHHHHHHH-h-ccchhhccCCCCHHHHHHHHHHHHhc
Confidence 467888776665544444444 4 67766666889999999999999875
No 259
>2woj_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; HET: ADP; 1.99A {Saccharomyces cerevisiae} PDB: 3h84_A 3zs8_A 3zs9_A* 3sja_A 3sjb_A 3sjc_A 3sjd_A* 3idq_A 3a36_A 3a37_A*
Probab=26.14 E-value=64 Score=30.30 Aligned_cols=46 Identities=17% Similarity=0.127 Sum_probs=35.9
Q ss_pred CCEEEEEc-CCCCCCHHHHHHHHHHHH--hCCcEEEEEeCCCchhhhhhc
Q 011531 7 NPHVVLLP-YPLQGHIKPMMSLAELLG--SANFQVTFVNTDHNHDLLLRN 53 (483)
Q Consensus 7 ~~~il~~~-~~~~GH~~p~l~La~~L~--~rGH~V~~~~~~~~~~~~~~~ 53 (483)
..+|+|++ -|+-|-..-...||..|+ ++|++|.++..+.. ..+...
T Consensus 17 ~~~i~v~sgKGGvGKTTvaanLA~~lA~~~~G~rVLLvD~D~~-~~l~~~ 65 (354)
T 2woj_A 17 THKWIFVGGKGGVGKTTSSCSIAIQMALSQPNKQFLLISTDPA-HNLSDA 65 (354)
T ss_dssp SCCEEEEEESTTSSHHHHHHHHHHHHHHHCTTSCEEEEECCSS-CCHHHH
T ss_pred CcEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCCC-CCHHHH
Confidence 35565554 488999999999999999 99999999998753 444333
No 260
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=26.13 E-value=34 Score=31.12 Aligned_cols=32 Identities=13% Similarity=0.161 Sum_probs=25.2
Q ss_pred HhccCCccceeeccCchhHHHHHHh----CCceecccc
Q 011531 366 VLAHPAVGGFLTHGGWNSTLEGIAA----GVPMICWPQ 399 (483)
Q Consensus 366 ll~~~~~~~~ItHgG~gs~~eal~~----GvP~l~~P~ 399 (483)
+-..+++ +|.=||=||+.+++.. ++|.+.++.
T Consensus 60 ~~~~~D~--vi~~GGDGT~l~a~~~~~~~~~P~lGI~~ 95 (292)
T 2an1_A 60 IGQQADL--AVVVGGDGNMLGAARTLARYDINVIGINR 95 (292)
T ss_dssp HHHHCSE--EEECSCHHHHHHHHHHHTTSSCEEEEBCS
T ss_pred cccCCCE--EEEEcCcHHHHHHHHHhhcCCCCEEEEEC
Confidence 3334555 9999999999999854 789999884
No 261
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=26.07 E-value=1.1e+02 Score=22.42 Aligned_cols=34 Identities=12% Similarity=-0.018 Sum_probs=25.3
Q ss_pred CCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeC
Q 011531 6 VNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNT 43 (483)
Q Consensus 6 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~ 43 (483)
+...|+++|..+ ......++.|.+.||+|.++..
T Consensus 55 ~~~~iv~yC~~g----~rs~~a~~~L~~~G~~v~~l~G 88 (103)
T 3eme_A 55 KNEIYYIVCAGG----VRSAKVVEYLEANGIDAVNVEG 88 (103)
T ss_dssp TTSEEEEECSSS----SHHHHHHHHHHTTTCEEEEETT
T ss_pred CCCeEEEECCCC----hHHHHHHHHHHHCCCCeEEeCC
Confidence 446788888643 3466788999999998887654
No 262
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=26.04 E-value=21 Score=32.75 Aligned_cols=32 Identities=9% Similarity=0.174 Sum_probs=25.9
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhC-----C-cEEEEEeC
Q 011531 7 NPHVVLLPYPLQGHIKPMMSLAELLGSA-----N-FQVTFVNT 43 (483)
Q Consensus 7 ~~~il~~~~~~~GH~~p~l~La~~L~~r-----G-H~V~~~~~ 43 (483)
+|||+|+..|..| ..+|..|+++ | |+|+++..
T Consensus 8 ~m~I~iiG~G~mG-----~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 8 PIKIAVFGLGGVG-----GYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp CEEEEEECCSHHH-----HHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCEEEEECcCHHH-----HHHHHHHHhCccccCCCCCEEEEEc
Confidence 4799999877766 3668888888 9 99998876
No 263
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=25.99 E-value=4.1e+02 Score=25.72 Aligned_cols=148 Identities=8% Similarity=0.018 Sum_probs=72.9
Q ss_pred CCCeEEEEecCcccCCCHHHHHHHHHHHHhCCCeEEEEEcCCccCCCCCCCCCChhhhhhcC-CCceeEEeccCHHHHhc
Q 011531 290 PPKSVLYVSFGSLVGLTREQMSELWHGLVNRGQRFLLVVRPDLILGEPGAAETPLAQNEGTE-ERNRFIVSWAPQEEVLA 368 (483)
Q Consensus 290 ~~~~vi~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~nv~~~~~~p~~~ll~ 368 (483)
.+++|+.|..|..+ ...++.|.+.|.++.++-.. +.+.+.+-.. .+ +.+..---+..-|.
T Consensus 11 ~~~~vlVvGgG~va-------~~k~~~L~~~ga~V~vi~~~-----------~~~~~~~l~~~~~-i~~~~~~~~~~~l~ 71 (457)
T 1pjq_A 11 RDRDCLIVGGGDVA-------ERKARLLLEAGARLTVNALT-----------FIPQFTVWANEGM-LTLVEGPFDETLLD 71 (457)
T ss_dssp BTCEEEEECCSHHH-------HHHHHHHHHTTBEEEEEESS-----------CCHHHHHHHTTTS-CEEEESSCCGGGGT
T ss_pred CCCEEEEECCCHHH-------HHHHHHHHhCcCEEEEEcCC-----------CCHHHHHHHhcCC-EEEEECCCCccccC
Confidence 45678888877544 23445556678777665521 2233332211 23 54442211223344
Q ss_pred cCCccceeeccCchh-----HHHHHHhCCce--eccccccchhHHHHHHHHhhccceecC-CCCC-HHHHHHHHHHHHhH
Q 011531 369 HPAVGGFLTHGGWNS-----TLEGIAAGVPM--ICWPQFSDQLVNSRCVSEVWKIGFDMK-DTCD-GSIIEKLVRDLMEN 439 (483)
Q Consensus 369 ~~~~~~~ItHgG~gs-----~~eal~~GvP~--l~~P~~~DQ~~na~~v~~~~G~G~~l~-~~~~-~~~l~~~i~~ll~~ 439 (483)
..++ +|.--|.-. ..+|-..|+|+ +--|-..|...-|-.-....-+|+.-. ++.+ ...|++.|...|.+
T Consensus 72 ~~~l--Vi~at~~~~~n~~i~~~a~~~~i~vn~~d~~e~~~~~~pa~~~~~~l~iaIsT~Gksp~la~~ir~~ie~~l~~ 149 (457)
T 1pjq_A 72 SCWL--AIAATDDDTVNQRVSDAAESRRIFCNVVDAPKAASFIMPSIIDRSPLMVAVSSGGTSPVLARLLREKLESLLPQ 149 (457)
T ss_dssp TCSE--EEECCSCHHHHHHHHHHHHHTTCEEEETTCTTSSSEECCEEEEETTEEEEEECTTSCHHHHHHHHHHHHHHSCT
T ss_pred CccE--EEEcCCCHHHHHHHHHHHHHcCCEEEECCCcccCceEeeeEEEeCCeEEEEECCCCChHHHHHHHHHHHHhcch
Confidence 4454 777777653 45566789997 443433332211100001123444422 2222 46667777766652
Q ss_pred hHHHHHHHHHHHHHHHHHH
Q 011531 440 KREEIMGSTDRVATMARDA 458 (483)
Q Consensus 440 ~~~~~~~~a~~l~~~~~~~ 458 (483)
.-..+.+.+.++++.+++.
T Consensus 150 ~~~~~~~~~~~~R~~~~~~ 168 (457)
T 1pjq_A 150 HLGQVARYAGQLRARVKKQ 168 (457)
T ss_dssp THHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhh
Confidence 2245666666666666654
No 264
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=25.98 E-value=62 Score=28.79 Aligned_cols=32 Identities=16% Similarity=0.052 Sum_probs=24.9
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeC
Q 011531 9 HVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNT 43 (483)
Q Consensus 9 ~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~ 43 (483)
|.++++.++.| =-..+++.|+++|++|+++.-
T Consensus 12 k~~lVTGas~g---IG~~ia~~l~~~G~~V~~~~r 43 (276)
T 1mxh_A 12 PAAVITGGARR---IGHSIAVRLHQQGFRVVVHYR 43 (276)
T ss_dssp CEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 56777776643 356889999999999998865
No 265
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=25.95 E-value=1e+02 Score=28.63 Aligned_cols=73 Identities=11% Similarity=0.175 Sum_probs=51.3
Q ss_pred CCHHHHHHHHHHHHhCCCeEEEEEcCCccCCCCCCCCCChhhhhhcCCCceeEEeccCHHHHhccCCccceeeccCchhH
Q 011531 305 LTREQMSELWHGLVNRGQRFLLVVRPDLILGEPGAAETPLAQNEGTEERNRFIVSWAPQEEVLAHPAVGGFLTHGGWNST 384 (483)
Q Consensus 305 ~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~ItHgG~gs~ 384 (483)
.+.+....+.+++.+...+.||..+. +. +- .++.++++...+-++|.+ ||-+.-...+
T Consensus 62 ~d~~Ra~dL~~a~~Dp~i~aI~~~rG-------G~------------g~-~rlL~~lD~~~i~~~PK~--~~GySDiTaL 119 (331)
T 4e5s_A 62 SISSRVQDLHEAFRDPNVKAILTTLG-------GY------------NS-NGLLKYLDYDLIRENPKF--FCGYSDITAL 119 (331)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCC-------CS------------CG-GGGGGGCCHHHHHTSCCE--EEECGGGHHH
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEccc-------cc------------cH-HHHHhhcChhHHHhCCeE--EEEecchHHH
Confidence 34455667888888777788887752 21 11 556677777777778887 9988888888
Q ss_pred HHHHH--hCCceecccc
Q 011531 385 LEGIA--AGVPMICWPQ 399 (483)
Q Consensus 385 ~eal~--~GvP~l~~P~ 399 (483)
+-+++ .|+..+-=|.
T Consensus 120 ~~al~~~~G~~t~hGp~ 136 (331)
T 4e5s_A 120 NNAIYTKTGLVTYSGPH 136 (331)
T ss_dssp HHHHHHHHCBCEEECCC
T ss_pred HHHHHHhhCCcEEEccc
Confidence 88887 5887766554
No 266
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=25.71 E-value=1.5e+02 Score=27.57 Aligned_cols=41 Identities=2% Similarity=0.003 Sum_probs=29.4
Q ss_pred CCCCEEEEEcCCCCCCHH----HHHHHHHHHHhCCcEEEEEeCCC
Q 011531 5 HVNPHVVLLPYPLQGHIK----PMMSLAELLGSANFQVTFVNTDH 45 (483)
Q Consensus 5 ~~~~~il~~~~~~~GH~~----p~l~La~~L~~rGH~V~~~~~~~ 45 (483)
.+...++++++|+.+-.. -+..+++.|.+.+..|.+.....
T Consensus 234 ~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~ 278 (400)
T 4amg_A 234 AAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLTLGGG 278 (400)
T ss_dssp CTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEECCTT
T ss_pred cCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCceEEEEecCc
Confidence 344567888888765433 36778899999999999887643
No 267
>3ip0_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; alpha beta, ATP-binding, folate biosynthesis, nucleotide-binding; HET: APC HHR HHS; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1hka_A 1eqm_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 1q0n_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A 1kbr_A 1hq2_A* ...
Probab=25.57 E-value=87 Score=25.59 Aligned_cols=28 Identities=25% Similarity=0.311 Sum_probs=23.0
Q ss_pred EEEEecCcccCCCHHHHHHHHHHHHhCC
Q 011531 294 VLYVSFGSLVGLTREQMSELWHGLVNRG 321 (483)
Q Consensus 294 vi~vs~Gs~~~~~~~~~~~~~~a~~~~~ 321 (483)
+.|+++||....+...+...+.++++..
T Consensus 2 iAyi~lGSNlGd~~~~l~~A~~~L~~~~ 29 (158)
T 3ip0_A 2 VAYIAIGSNLASPLEQVNAALKALGDIP 29 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEecchhhHHHHHHHHHHHHHcCC
Confidence 5799999998777778888888887753
No 268
>2oxj_A Hybrid alpha/beta peptide based on the GCN4-P1 Se heptad positions B and F substituted...; helix bundle, foldamer, unknown function; HET: B3K B3D B3E B3S B3Y B3X B3A BAL; 2.00A {Synthetic} PDB: 2oxk_A*
Probab=25.47 E-value=1e+02 Score=17.68 Aligned_cols=27 Identities=19% Similarity=0.325 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHh-HhHHHHHHHHHHHHHHH
Q 011531 427 SIIEKLVRDLME-NKREEIMGSTDRVATMA 455 (483)
Q Consensus 427 ~~l~~~i~~ll~-~~~~~~~~~a~~l~~~~ 455 (483)
.+|.+.|..+|. | ..+...+.++++.+
T Consensus 4 nQLE~kVEeLl~~n--~~Le~eV~rLk~ll 31 (34)
T 2oxj_A 4 XQLEXKVXELLXKN--XHLEXEVXRLKXLV 31 (34)
T ss_dssp HHHHHHHHHHHHHH--HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhh--hhHHHHHHHHHHHH
Confidence 467888999988 5 78889999988876
No 269
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=25.42 E-value=95 Score=26.24 Aligned_cols=33 Identities=15% Similarity=0.119 Sum_probs=23.1
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCC
Q 011531 8 PHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTD 44 (483)
Q Consensus 8 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~ 44 (483)
|||+++. +.|.+ -..|+++|.++||+|+.+.-.
T Consensus 1 MkilVtG--atG~i--G~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 1 MKIAVLG--ATGRA--GSAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp CEEEEET--TTSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEc--CCCHH--HHHHHHHHHHCCCEEEEEEec
Confidence 4655543 33433 367899999999999988763
No 270
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=25.30 E-value=2.2e+02 Score=26.37 Aligned_cols=37 Identities=16% Similarity=0.056 Sum_probs=26.6
Q ss_pred CEEEEEcCCCCCCH-------HHHHHHHHHHHhCCcEEEEEeCC
Q 011531 8 PHVVLLPYPLQGHI-------KPMMSLAELLGSANFQVTFVNTD 44 (483)
Q Consensus 8 ~~il~~~~~~~GH~-------~p~l~La~~L~~rGH~V~~~~~~ 44 (483)
..++++++|+.+.. .-+..+.+.|.+.|.+|++++..
T Consensus 210 ~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~g~ 253 (384)
T 2p6p_A 210 RQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVELIVAAPD 253 (384)
T ss_dssp SCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTCEEEEECCH
T ss_pred CCEEEEECCCCCccccccccHHHHHHHHHHHhcCCcEEEEEeCC
Confidence 35667778777653 45677888888888888877663
No 271
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=25.25 E-value=3.3e+02 Score=23.56 Aligned_cols=33 Identities=12% Similarity=0.098 Sum_probs=23.4
Q ss_pred EEEEEcCCC--CCCHHHHHHHHHHHHhCCcEEEEEeCC
Q 011531 9 HVVLLPYPL--QGHIKPMMSLAELLGSANFQVTFVNTD 44 (483)
Q Consensus 9 ~il~~~~~~--~GH~~p~l~La~~L~~rGH~V~~~~~~ 44 (483)
|.++++.++ .| =-.++|+.|+++|++|+++...
T Consensus 8 k~vlVTGasg~~G---IG~~ia~~l~~~G~~V~~~~r~ 42 (266)
T 3oig_A 8 RNIVVMGVANKRS---IAWGIARSLHEAGARLIFTYAG 42 (266)
T ss_dssp CEEEEECCCSTTS---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEEcCCCCCc---HHHHHHHHHHHCCCEEEEecCc
Confidence 455566554 22 2468899999999999987653
No 272
>2hy6_A General control protein GCN4; protein design, parallel heptamer, protein structure, biosyn protein; 1.25A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2nrn_A 3crp_A 2b1f_A 3crp_B 2ipz_A 3ck4_A 3ck4_B 2b22_A 1ce9_A
Probab=25.22 E-value=1e+02 Score=17.66 Aligned_cols=27 Identities=19% Similarity=0.292 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHh-HhHHHHHHHHHHHHHHH
Q 011531 427 SIIEKLVRDLME-NKREEIMGSTDRVATMA 455 (483)
Q Consensus 427 ~~l~~~i~~ll~-~~~~~~~~~a~~l~~~~ 455 (483)
.+|.++|.+++. + ..+...+.++++.+
T Consensus 4 nQLEdkVEeLl~~~--~~Le~eV~RL~~ll 31 (34)
T 2hy6_A 4 KQLADAVEELASAN--YHLANAVARLAKAV 31 (34)
T ss_dssp HHHHHHHHHHHHHH--HHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhh--HHHHHHHHHHHHHh
Confidence 478888999988 5 77888888888776
No 273
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=25.19 E-value=91 Score=27.88 Aligned_cols=33 Identities=15% Similarity=0.148 Sum_probs=25.4
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeC
Q 011531 8 PHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNT 43 (483)
Q Consensus 8 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~ 43 (483)
-|.++++.++.| =-.++|++|+++|++|+++..
T Consensus 29 gk~vlVTGas~g---IG~aia~~la~~G~~V~~~~r 61 (277)
T 3gvc_A 29 GKVAIVTGAGAG---IGLAVARRLADEGCHVLCADI 61 (277)
T ss_dssp TCEEEETTTTST---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 467777777643 246789999999999998765
No 274
>1rh1_A Colicin B; FEPA, cytotoxic bacterial protein, TONB, antibiotic; 2.50A {Escherichia coli} SCOP: b.110.1.1 f.1.1.1
Probab=25.03 E-value=78 Score=30.45 Aligned_cols=41 Identities=15% Similarity=0.214 Sum_probs=32.7
Q ss_pred hHhHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHhhh
Q 011531 438 ENKREEIMGSTDRVATMARDAVNEGGSSYRNLDGLIEDIRLMAR 481 (483)
Q Consensus 438 ~~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~l~~~l~~~~~ 481 (483)
+..|++|++.|++|++.++++ .|..-+.+++.++.+++-..
T Consensus 338 e~~G~Kyk~lAkeIA~~lkn~---KGKkIRnvdDAL~sfeKyk~ 378 (511)
T 1rh1_A 338 EYLGDKYKALSREIAENINNF---QGKTIRSYDDAMSSINKLMA 378 (511)
T ss_dssp HHHCHHHHHHHHHHHHHHHHC---TTCCCCCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHhhc---cCceecCHHHHHHHHHHHHh
Confidence 344578889999999988776 88888889999988887665
No 275
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=25.00 E-value=72 Score=24.49 Aligned_cols=39 Identities=8% Similarity=-0.061 Sum_probs=27.8
Q ss_pred CCEEEEEcCCCCCCH--HHHHHHHHHHHhCC--cEEEEEeCCC
Q 011531 7 NPHVVLLPYPLQGHI--KPMMSLAELLGSAN--FQVTFVNTDH 45 (483)
Q Consensus 7 ~~~il~~~~~~~GH~--~p~l~La~~L~~rG--H~V~~~~~~~ 45 (483)
++|++|+-.-..-.. +..+..|....++| |+|.++-..+
T Consensus 7 ~~K~~ivi~s~d~~~~~~~al~~A~~a~~~G~~~eV~i~~~G~ 49 (117)
T 2fb6_A 7 NDKLTILWTTDNKDTVFNMLAMYALNSKNRGWWKHINIILWGA 49 (117)
T ss_dssp TSEEEEEECCCCHHHHHHTHHHHHHHHHHHTSCSEEEEEECSH
T ss_pred CCeEEEEEEcCChHHHHHHHHHHHHHHHHcCCCCcEEEEEECC
Confidence 488877776543222 34677789999999 8999998743
No 276
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=24.72 E-value=58 Score=29.50 Aligned_cols=37 Identities=3% Similarity=0.121 Sum_probs=28.0
Q ss_pred CEEEEEcCCCCCC---HHHHHHHHHHHHhCCcEEEEEeCC
Q 011531 8 PHVVLLPYPLQGH---IKPMMSLAELLGSANFQVTFVNTD 44 (483)
Q Consensus 8 ~~il~~~~~~~GH---~~p~l~La~~L~~rGH~V~~~~~~ 44 (483)
|||+++..+.... ......++++|.++||+|.++.+.
T Consensus 2 m~i~il~~~~~~~~~~~~s~~~l~~a~~~~G~~v~~~d~~ 41 (316)
T 1gsa_A 2 IKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMG 41 (316)
T ss_dssp CEEEEECSCGGGCCTTTCHHHHHHHHHHHTTCEEEEECGG
T ss_pred ceEEEEeCcHHhCCcCCChHHHHHHHHHHCCCEEEEEchh
Confidence 5899998874221 234567999999999999988763
No 277
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=24.64 E-value=3.6e+02 Score=24.49 Aligned_cols=62 Identities=11% Similarity=0.007 Sum_probs=37.8
Q ss_pred ccCHHHHhccCCccceeeccCc----hhHHHHHHhCCceecc-cccc--chhHHHHHHHHhhccceecC
Q 011531 360 WAPQEEVLAHPAVGGFLTHGGW----NSTLEGIAAGVPMICW-PQFS--DQLVNSRCVSEVWKIGFDMK 421 (483)
Q Consensus 360 ~~p~~~ll~~~~~~~~ItHgG~----gs~~eal~~GvP~l~~-P~~~--DQ~~na~~v~~~~G~G~~l~ 421 (483)
+-...+++..+++++++---.. --+.+++.+|+++++= |+.. ++-.-...++++.|+-+.+.
T Consensus 52 ~~~~~~~l~~~~~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~ 120 (331)
T 4hkt_A 52 VRTIDAIEAAADIDAVVICTPTDTHADLIERFARAGKAIFCEKPIDLDAERVRACLKVVSDTKAKLMVG 120 (331)
T ss_dssp ECCHHHHHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEEC
T ss_pred cCCHHHHhcCCCCCEEEEeCCchhHHHHHHHHHHcCCcEEEecCCCCCHHHHHHHHHHHHHcCCeEEEc
Confidence 5667888987777777753333 3467789999998763 5443 33333333334467666654
No 278
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=24.56 E-value=85 Score=27.38 Aligned_cols=33 Identities=12% Similarity=0.149 Sum_probs=24.1
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeC
Q 011531 8 PHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNT 43 (483)
Q Consensus 8 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~ 43 (483)
||.++++.++.| =-.++++.|+++|++|+++.-
T Consensus 1 mk~vlVTGas~g---IG~~~a~~l~~~G~~V~~~~r 33 (257)
T 1fjh_A 1 MSIIVISGCATG---IGAATRKVLEAAGHQIVGIDI 33 (257)
T ss_dssp CCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 355666666532 346789999999999998765
No 279
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=24.42 E-value=45 Score=30.72 Aligned_cols=39 Identities=18% Similarity=0.186 Sum_probs=21.0
Q ss_pred CCCCCCC--CEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeC
Q 011531 1 MERSHVN--PHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNT 43 (483)
Q Consensus 1 ~~~~~~~--~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~ 43 (483)
|++.+++ ++|++. .+ .|-+ -..|+++|.++||+|+.+.-
T Consensus 1 ~~~~~~~~~~~vlVT-Ga-tGfI--G~~l~~~Ll~~G~~V~~~~r 41 (338)
T 2rh8_A 1 MATQHPIGKKTACVV-GG-TGFV--ASLLVKLLLQKGYAVNTTVR 41 (338)
T ss_dssp --------CCEEEEE-CT-TSHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCcCcCCCCCEEEEE-CC-chHH--HHHHHHHHHHCCCEEEEEEc
Confidence 6666666 455444 33 2433 24688999999999997654
No 280
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=24.39 E-value=1e+02 Score=23.56 Aligned_cols=48 Identities=4% Similarity=-0.049 Sum_probs=34.9
Q ss_pred hCCceeccccccchhHHHHHHHHhhccceecCCCCCHHHHHHHHHHHHhH
Q 011531 390 AGVPMICWPQFSDQLVNSRCVSEVWKIGFDMKDTCDGSIIEKLVRDLMEN 439 (483)
Q Consensus 390 ~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~~i~~ll~~ 439 (483)
..+|+|++--..|.......+ + .|+--.+.+.++.+.|.++|.++++.
T Consensus 76 ~~~~ii~ls~~~~~~~~~~~~-~-~g~~~~l~kp~~~~~l~~~l~~~~~~ 123 (143)
T 3jte_A 76 PHMAVIILTGHGDLDNAILAM-K-EGAFEYLRKPVTAQDLSIAINNAINR 123 (143)
T ss_dssp TTCEEEEEECTTCHHHHHHHH-H-TTCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCCeEEEEECCCCHHHHHHHH-H-hCcceeEeCCCCHHHHHHHHHHHHHH
Confidence 367888776655544444444 4 67766676789999999999999985
No 281
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=24.24 E-value=3.5e+02 Score=23.41 Aligned_cols=44 Identities=7% Similarity=0.208 Sum_probs=23.7
Q ss_pred CCCCCCCCEEEEEcCCCCCCH-HH-HHHHHHHHHhCCcEEEEEeCC
Q 011531 1 MERSHVNPHVVLLPYPLQGHI-KP-MMSLAELLGSANFQVTFVNTD 44 (483)
Q Consensus 1 ~~~~~~~~~il~~~~~~~GH~-~p-~l~La~~L~~rGH~V~~~~~~ 44 (483)
|..+.+..+|.++.......+ .. ...+-+++.++|+++.++...
T Consensus 1 ~s~~~~s~~Igvi~~~~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~ 46 (276)
T 3jy6_A 1 MSLTQSSKLIAVIVANIDDYFSTELFKGISSILESRGYIGVLFDAN 46 (276)
T ss_dssp ----CCCCEEEEEESCTTSHHHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred CCcCCCCcEEEEEeCCCCchHHHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 444455667766554332222 22 344666777889999887763
No 282
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=24.20 E-value=40 Score=31.24 Aligned_cols=36 Identities=28% Similarity=0.376 Sum_probs=26.1
Q ss_pred CCCCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCC
Q 011531 4 SHVNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTD 44 (483)
Q Consensus 4 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~ 44 (483)
+.+-.||.|+..|..| ..+|..|+++||+|+++...
T Consensus 3 ~~~~~kI~vIGaG~MG-----~~iA~~la~~G~~V~l~d~~ 38 (319)
T 2dpo_A 3 SPAAGDVLIVGSGLVG-----RSWAMLFASGGFRVKLYDIE 38 (319)
T ss_dssp ----CEEEEECCSHHH-----HHHHHHHHHTTCCEEEECSC
T ss_pred CCCCceEEEEeeCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 3455789998776554 57899999999999988653
No 283
>1qo0_D AMIR; binding protein, gene regulator, receptor; 2.25A {Pseudomonas aeruginosa} SCOP: c.23.1.3
Probab=24.19 E-value=2.3e+02 Score=23.14 Aligned_cols=48 Identities=8% Similarity=0.073 Sum_probs=34.1
Q ss_pred hCCceeccccccchhHHHHHHHHhhccceecCCCCCHHHHHHHHHHHHhH
Q 011531 390 AGVPMICWPQFSDQLVNSRCVSEVWKIGFDMKDTCDGSIIEKLVRDLMEN 439 (483)
Q Consensus 390 ~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~~i~~ll~~ 439 (483)
..+|+|++--..|.......+ + .|+--.+.+.++.+.|..+|..++..
T Consensus 78 ~~~~ii~lt~~~~~~~~~~a~-~-~ga~~~l~KP~~~~~L~~~l~~~~~~ 125 (196)
T 1qo0_D 78 PRTTLVALVEYESPAVLSQII-E-LECHGVITQPLDAHRVLPVLVSARRI 125 (196)
T ss_dssp TTCEEEEEECCCSHHHHHHHH-H-HTCSEEEESSCCGGGHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCChHHHHHHH-H-cCCCeeEecCcCHHHHHHHHHHHHHH
Confidence 467888876666655434344 4 68776666788999999999988763
No 284
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=24.18 E-value=80 Score=28.10 Aligned_cols=33 Identities=18% Similarity=0.195 Sum_probs=25.0
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCC
Q 011531 7 NPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTD 44 (483)
Q Consensus 7 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~ 44 (483)
.+||++.. + |- =-..|++.|.++||+|+.+.-.
T Consensus 3 ~~~ilVtG--a-G~--iG~~l~~~L~~~g~~V~~~~r~ 35 (286)
T 3gpi_A 3 LSKILIAG--C-GD--LGLELARRLTAQGHEVTGLRRS 35 (286)
T ss_dssp CCCEEEEC--C-SH--HHHHHHHHHHHTTCCEEEEECT
T ss_pred CCcEEEEC--C-CH--HHHHHHHHHHHCCCEEEEEeCC
Confidence 35777763 5 63 4567899999999999988763
No 285
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=24.11 E-value=1.3e+02 Score=25.85 Aligned_cols=39 Identities=10% Similarity=-0.034 Sum_probs=24.5
Q ss_pred CCCCCCCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeC
Q 011531 1 MERSHVNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNT 43 (483)
Q Consensus 1 ~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~ 43 (483)
|..+-+.+++++ +.++ |- =-..++++|+++|++|+++..
T Consensus 1 m~~~~~~~~vlV-TGas-gg--iG~~~a~~l~~~G~~V~~~~r 39 (244)
T 1cyd_A 1 MKLNFSGLRALV-TGAG-KG--IGRDTVKALHASGAKVVAVTR 39 (244)
T ss_dssp --CCCTTCEEEE-ESTT-SH--HHHHHHHHHHHTTCEEEEEES
T ss_pred CccCCCCCEEEE-eCCC-ch--HHHHHHHHHHHCCCEEEEEeC
Confidence 444444555544 4433 32 245789999999999998765
No 286
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=24.05 E-value=63 Score=29.10 Aligned_cols=31 Identities=16% Similarity=0.194 Sum_probs=24.3
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEe
Q 011531 7 NPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVN 42 (483)
Q Consensus 7 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~ 42 (483)
.|||.|+..|..|. .+++.|.+.||+|+++.
T Consensus 3 ~m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~ 33 (295)
T 1yb4_A 3 AMKLGFIGLGIMGS-----PMAINLARAGHQLHVTT 33 (295)
T ss_dssp -CEEEECCCSTTHH-----HHHHHHHHTTCEEEECC
T ss_pred CCEEEEEccCHHHH-----HHHHHHHhCCCEEEEEc
Confidence 37899987776664 57888999999998765
No 287
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=24.00 E-value=95 Score=23.34 Aligned_cols=46 Identities=4% Similarity=0.070 Sum_probs=34.8
Q ss_pred CCceeccccccchhHHHHHHHHhhccceecCCCCCHHHHHHHHHHHHh
Q 011531 391 GVPMICWPQFSDQLVNSRCVSEVWKIGFDMKDTCDGSIIEKLVRDLME 438 (483)
Q Consensus 391 GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~~i~~ll~ 438 (483)
.+|++++--..+...-.+.+ + .|+--.+.+.++.++|.++|++++.
T Consensus 81 ~~pii~~s~~~~~~~~~~~~-~-~g~~~~l~KP~~~~~L~~~l~~~l~ 126 (129)
T 3h1g_A 81 EIPIIMITAEGGKAEVITAL-K-AGVNNYIVKPFTPQVLKEKLEVVLG 126 (129)
T ss_dssp TCCEEEEESCCSHHHHHHHH-H-HTCCEEEESCCCHHHHHHHHHHHHC
T ss_pred CCeEEEEeCCCChHHHHHHH-H-cCccEEEeCCCCHHHHHHHHHHHhc
Confidence 57888877666655444444 4 6877777788999999999999986
No 288
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=23.96 E-value=2.3e+02 Score=25.58 Aligned_cols=114 Identities=9% Similarity=0.026 Sum_probs=70.1
Q ss_pred HHHHHHHHhCCCeEEEEEcCCccCCCCCCCCCChhhhhhcCCCceeEEeccCHHHHhccCCccceeeccCchhHHHHHHh
Q 011531 311 SELWHGLVNRGQRFLLVVRPDLILGEPGAAETPLAQNEGTEERNRFIVSWAPQEEVLAHPAVGGFLTHGGWNSTLEGIAA 390 (483)
Q Consensus 311 ~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~ItHgG~gs~~eal~~ 390 (483)
..+++.++..+..+++.. |.-..+++.+.+..+.+ ++-.+ ..+| |+ ..|.+.+..|+.+
T Consensus 156 ~~~~~~l~~~~~Dlivla--------gy~~il~~~~l~~~~~~-~iNiH----pSlL--P~------~rG~~p~~~A~~~ 214 (288)
T 3obi_A 156 AAITALIAQTHTDLVVLA--------RYMQILSDEMSARLAGR-CINIH----HSFL--PG------FKGAKPYHQAFDR 214 (288)
T ss_dssp HHHHHHHHHHTCCEEEES--------SCCSCCCHHHHHHTTTS-EEEEE----EECS--SC------CCSSCHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEhh--------hhhhhCCHHHHhhhcCC-eEEeC----cccc--cC------CCCchHHHHHHHc
Confidence 457888888888888777 44457888887766554 33221 1123 22 4689999999999
Q ss_pred CCceecccccc--chhHHHHHHHHhhccceecCCCCCHHHHHHHHHHHHhHhHHHHHHHHHHH
Q 011531 391 GVPMICWPQFS--DQLVNSRCVSEVWKIGFDMKDTCDGSIIEKLVRDLMENKREEIMGSTDRV 451 (483)
Q Consensus 391 GvP~l~~P~~~--DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~~i~~ll~~~~~~~~~~a~~l 451 (483)
|+....+-.+. +..+....+. .--+.+...-|.++|.+.+.++-. .-|.+..+.+
T Consensus 215 G~~~~G~Tvh~v~~~~D~GpIi~---Q~~v~i~~~dt~~~L~~r~~~~e~---~~l~~av~~~ 271 (288)
T 3obi_A 215 GVKLIGATAHYVTSALDEGPIID---QDVERISHRDTPADLVRKGRDIER---RVLSRALHYH 271 (288)
T ss_dssp TCSEEEEEEEECCSSTTCSCEEE---EEEEECCTTCCHHHHHHHHHHHHH---HHHHHHHHHH
T ss_pred CCCEEEEEEEEECCCCcCCCeEE---EEEEecCCCCCHHHHHHHHHHHHH---HHHHHHHHHH
Confidence 99988877653 2222222221 122333346788888888776643 4555555544
No 289
>2ywx_A Phosphoribosylaminoimidazole carboxylase catalyti; rossmann fold, structural genomics, NPPSFA; 2.31A {Methanocaldococcus jannaschii}
Probab=23.94 E-value=2.9e+02 Score=22.39 Aligned_cols=134 Identities=17% Similarity=0.183 Sum_probs=68.4
Q ss_pred EEEecCcccCCCHHHHHHHHHHHHhCCCeEEEEEcCCccCCCCCCCCCChhhhhhcCCCceeEEeccCHHHHhccCCccc
Q 011531 295 LYVSFGSLVGLTREQMSELWHGLVNRGQRFLLVVRPDLILGEPGAAETPLAQNEGTEERNRFIVSWAPQEEVLAHPAVGG 374 (483)
Q Consensus 295 i~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~ 374 (483)
|-|-+||.. +....+++...++..|.++=.-+ -+...+|+.+.+ +.+...-++
T Consensus 2 V~Iimgs~S--D~~v~~~a~~~l~~~gi~~dv~V--------~saHR~p~~~~~-----------------~~~~a~~~V 54 (157)
T 2ywx_A 2 ICIIMGSES--DLKIAEKAVNILKEFGVEFEVRV--------ASAHRTPELVEE-----------------IVKNSKADV 54 (157)
T ss_dssp EEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEE--------CCTTTCHHHHHH-----------------HHHHCCCSE
T ss_pred EEEEEccHH--HHHHHHHHHHHHHHcCCCeEEEE--------EcccCCHHHHHH-----------------HHHhcCCCE
Confidence 445566655 56667778888888887754333 122244454332 111000033
Q ss_pred eeeccCchhHHHHHH---hCCceecccccc-chhHHHH--HHHHhhcccee---cCCCCCHHHHHHHHHHHHhHhHHHHH
Q 011531 375 FLTHGGWNSTLEGIA---AGVPMICWPQFS-DQLVNSR--CVSEVWKIGFD---MKDTCDGSIIEKLVRDLMENKREEIM 445 (483)
Q Consensus 375 ~ItHgG~gs~~eal~---~GvP~l~~P~~~-DQ~~na~--~v~~~~G~G~~---l~~~~~~~~l~~~i~~ll~~~~~~~~ 445 (483)
+|.=.|.-.-+-.+. .-+|+|.+|... .....+- .++--.|+.+. +++..+..-++..|..+ .+ +.++
T Consensus 55 iIa~AG~aa~Lpgvva~~t~~PVIgVP~~~~l~G~daLlS~vqmP~gvpVatV~I~~~~nAa~lA~~Il~~-~d--~~l~ 131 (157)
T 2ywx_A 55 FIAIAGLAAHLPGVVASLTTKPVIAVPVDAKLDGLDALLSSVQMPPGIPVATVGIDRGENAAILALEILAL-KD--ENIA 131 (157)
T ss_dssp EEEEEESSCCHHHHHHTTCSSCEEEEEECSSGGGHHHHHHHHSCCTTSCCEECCTTCHHHHHHHHHHHHTT-TC--HHHH
T ss_pred EEEEcCchhhhHHHHHhccCCCEEEecCCCccCcHHHHHHHhcCCCCCeeEEEecCCcHHHHHHHHHHHhc-CC--HHHH
Confidence 666655433333333 346899999832 2222221 23100143322 22344555555444322 25 7888
Q ss_pred HHHHHHHHHHHHH
Q 011531 446 GSTDRVATMARDA 458 (483)
Q Consensus 446 ~~a~~l~~~~~~~ 458 (483)
++.+.+++.+++.
T Consensus 132 ~kl~~~r~~~~~~ 144 (157)
T 2ywx_A 132 KKLIEYREKMKKK 144 (157)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 8888888888764
No 290
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=23.90 E-value=55 Score=28.19 Aligned_cols=33 Identities=12% Similarity=0.120 Sum_probs=23.9
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeC
Q 011531 8 PHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNT 43 (483)
Q Consensus 8 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~ 43 (483)
||.++++.++.| =-.++|+.|+++|++|+++..
T Consensus 1 Mk~vlVTGas~g---IG~~~a~~l~~~G~~V~~~~r 33 (230)
T 3guy_A 1 MSLIVITGASSG---LGAELAKLYDAEGKATYLTGR 33 (230)
T ss_dssp --CEEEESTTSH---HHHHHHHHHHHTTCCEEEEES
T ss_pred CCEEEEecCCch---HHHHHHHHHHHCCCEEEEEeC
Confidence 456777776642 346889999999999988775
No 291
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=23.82 E-value=2.5e+02 Score=25.41 Aligned_cols=110 Identities=15% Similarity=0.204 Sum_probs=60.7
Q ss_pred CCCCCEEEEEcCCCCCCHHHHHHHHHHHHhC--CcEEEEEeCCCchhhhhhccccccccCCCCCeEEEeCCCCCCCCccc
Q 011531 4 SHVNPHVVLLPYPLQGHIKPMMSLAELLGSA--NFQVTFVNTDHNHDLLLRNTDITSFCNRFPNFQFRSIPSGLPANVIR 81 (483)
Q Consensus 4 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~r--GH~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~~~p~~l~~~~~~ 81 (483)
..+++||+++..+. || -+.+|.++-.+. ..+|..+.+..... +.+ .....++.+..+|...+
T Consensus 85 ~~~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~i~~Visn~~~a-~~~-------~A~~~gIp~~~~~~~~~----- 148 (287)
T 3nrb_A 85 RTDRKKVVIMVSKF-DH--CLGDLLYRHRLGELDMEVVGIISNHPRE-ALS-------VSLVGDIPFHYLPVTPA----- 148 (287)
T ss_dssp TTCCCEEEEEECSC-CH--HHHHHHHHHHHTSSCCEEEEEEESSCGG-GCC-------CCCCTTSCEEECCCCGG-----
T ss_pred cCCCcEEEEEEeCC-Cc--CHHHHHHHHHCCCCCeEEEEEEeCChHH-HHH-------HHHHcCCCEEEEeccCc-----
Confidence 34678999888877 44 344555555443 35777666532211 111 11223577777663110
Q ss_pred CCCCHHHHHHHHHHhchHHHHHHHHHhhhhhcCCCCccEEEEcCCCCcchHHHHHHcCCCeEEEecc
Q 011531 82 SGLTAKDVFDAMKAVSKPAFRDLLISLREETEQRQSPTCVIADGILCFLTLDVSEELQIPLLALRTH 148 (483)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~D~VI~D~~~~~~~~~~A~~lgIP~v~~~~~ 148 (483)
+ .......+.+++++ .++|+||.-.+.-.+...+-+.+.-.++-+.++
T Consensus 149 ---~--------r~~~~~~~~~~l~~--------~~~Dlivlagym~il~~~~l~~~~~~~iNiHpS 196 (287)
T 3nrb_A 149 ---T--------KAAQESQIKNIVTQ--------SQADLIVLARYMQILSDDLSAFLSGRCINIHHS 196 (287)
T ss_dssp ---G--------HHHHHHHHHHHHHH--------HTCSEEEESSCCSCCCHHHHHHHTTSEEEEESS
T ss_pred ---c--------hhhHHHHHHHHHHH--------hCCCEEEhhhhhhhcCHHHHhhccCCeEEECcc
Confidence 0 11122334455555 469999998875433666777777777777553
No 292
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=23.74 E-value=2.2e+02 Score=26.32 Aligned_cols=111 Identities=9% Similarity=-0.063 Sum_probs=56.8
Q ss_pred CeEEEEecCcccCCCHHHHHHHHHHHHhC-CCeEEEEEcCCccCCCCCCCCCChhhhhhcCCCceeEEeccCHHHHhccC
Q 011531 292 KSVLYVSFGSLVGLTREQMSELWHGLVNR-GQRFLLVVRPDLILGEPGAAETPLAQNEGTEERNRFIVSWAPQEEVLAHP 370 (483)
Q Consensus 292 ~~vi~vs~Gs~~~~~~~~~~~~~~a~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~ 370 (483)
-.+.+|..|.+.. ...+.++... +..++.+...+. .....+.++. + +. .+-...+++..+
T Consensus 28 ~rigiIG~G~~g~------~~~~~~l~~~~~~~l~av~d~~~--------~~~~~~a~~~--g-~~--~~~~~~~ll~~~ 88 (350)
T 3rc1_A 28 IRVGVIGCADIAW------RRALPALEAEPLTEVTAIASRRW--------DRAKRFTERF--G-GE--PVEGYPALLERD 88 (350)
T ss_dssp EEEEEESCCHHHH------HTHHHHHHHCTTEEEEEEEESSH--------HHHHHHHHHH--C-SE--EEESHHHHHTCT
T ss_pred eEEEEEcCcHHHH------HHHHHHHHhCCCeEEEEEEcCCH--------HHHHHHHHHc--C-CC--CcCCHHHHhcCC
Confidence 3577888887653 1245555555 445555553210 0001121111 1 32 235578888877
Q ss_pred CccceeeccCc----hhHHHHHHhCCceec-ccccc--chhHHHHHHHHhhccceecC
Q 011531 371 AVGGFLTHGGW----NSTLEGIAAGVPMIC-WPQFS--DQLVNSRCVSEVWKIGFDMK 421 (483)
Q Consensus 371 ~~~~~ItHgG~----gs~~eal~~GvP~l~-~P~~~--DQ~~na~~v~~~~G~G~~l~ 421 (483)
++++++----. --+.+|+.+|+++++ =|+.. +|-.-...++++.|+-+.+.
T Consensus 89 ~~D~V~i~tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~ 146 (350)
T 3rc1_A 89 DVDAVYVPLPAVLHAEWIDRALRAGKHVLAEKPLTTDRPQAERLFAVARERGLLLMEN 146 (350)
T ss_dssp TCSEEEECCCGGGHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCEEEECCCcHHHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEE
Confidence 77777753332 346677888998765 25543 33333333334455555443
No 293
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=23.71 E-value=94 Score=24.57 Aligned_cols=33 Identities=12% Similarity=0.033 Sum_probs=28.3
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEE
Q 011531 7 NPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFV 41 (483)
Q Consensus 7 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~ 41 (483)
..+++++..|+ =+.|++.+++.|.++|.+|+++
T Consensus 18 ~~~~llIaGG~--GiaPl~sm~~~l~~~~~~v~l~ 50 (142)
T 3lyu_A 18 FGKILAIGAYT--GIVEVYPIAKAWQEIGNDVTTL 50 (142)
T ss_dssp CSEEEEEEETT--HHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCeEEEEECcC--cHHHHHHHHHHHHhcCCcEEEE
Confidence 45788877765 4899999999999999999988
No 294
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=23.71 E-value=26 Score=31.26 Aligned_cols=38 Identities=26% Similarity=0.277 Sum_probs=25.1
Q ss_pred CCCCCCCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcE-EEEEeC
Q 011531 1 MERSHVNPHVVLLPYPLQGHIKPMMSLAELLGSANFQ-VTFVNT 43 (483)
Q Consensus 1 ~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~-V~~~~~ 43 (483)
|..+.+.|||.|+..|..| ..+++.|.+.||+ |+++..
T Consensus 4 m~~~~~~m~i~iiG~G~mG-----~~~a~~l~~~g~~~v~~~~~ 42 (266)
T 3d1l_A 4 MKRSIEDTPIVLIGAGNLA-----TNLAKALYRKGFRIVQVYSR 42 (266)
T ss_dssp ---CGGGCCEEEECCSHHH-----HHHHHHHHHHTCCEEEEECS
T ss_pred hhcCCCCCeEEEEcCCHHH-----HHHHHHHHHCCCeEEEEEeC
Confidence 4455556899998765444 4568889899999 665543
No 295
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=23.61 E-value=3.6e+02 Score=23.41 Aligned_cols=39 Identities=0% Similarity=-0.126 Sum_probs=24.3
Q ss_pred CCCCEEEEEcCCCCCCHH--HHHHHHHHHHhCCcEEEEEeC
Q 011531 5 HVNPHVVLLPYPLQGHIK--PMMSLAELLGSANFQVTFVNT 43 (483)
Q Consensus 5 ~~~~~il~~~~~~~GH~~--p~l~La~~L~~rGH~V~~~~~ 43 (483)
++..+|.++.......+. -...+-+++.++|+++.+...
T Consensus 3 ~~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~ 43 (291)
T 3l49_A 3 LEGKTIGITAIGTDHDWDLKAYQAQIAEIERLGGTAIALDA 43 (291)
T ss_dssp CTTCEEEEEESCCSSHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCcEEEEEeCCCCChHHHHHHHHHHHHHHHcCCEEEEEcC
Confidence 345667666544332222 245667778888999988866
No 296
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=23.60 E-value=4.2e+02 Score=24.50 Aligned_cols=92 Identities=13% Similarity=0.071 Sum_probs=52.7
Q ss_pred CeEEEEecCcccCCCHHHHHHHHHHHHhCCCeEEEEEcCCccCCCCCCCCCChhhhhhcCCCceeEEeccCHHHHhccCC
Q 011531 292 KSVLYVSFGSLVGLTREQMSELWHGLVNRGQRFLLVVRPDLILGEPGAAETPLAQNEGTEERNRFIVSWAPQEEVLAHPA 371 (483)
Q Consensus 292 ~~vi~vs~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~ 371 (483)
-.+.+|..|.+.. ..++.++...+.+++.+...+. .....+.++.+ . ..-|-...++|..++
T Consensus 27 irvgiiG~G~~~~------~~~~~~~~~~~~~lvav~d~~~--------~~a~~~a~~~~-~---~~~~~~~~~ll~~~~ 88 (361)
T 3u3x_A 27 LRFAAVGLNHNHI------YGQVNCLLRAGARLAGFHEKDD--------ALAAEFSAVYA-D---ARRIATAEEILEDEN 88 (361)
T ss_dssp CEEEEECCCSTTH------HHHHHHHHHTTCEEEEEECSCH--------HHHHHHHHHSS-S---CCEESCHHHHHTCTT
T ss_pred cEEEEECcCHHHH------HHHHHHhhcCCcEEEEEEcCCH--------HHHHHHHHHcC-C---CcccCCHHHHhcCCC
Confidence 4578888886531 2234444456778777763220 00012222221 1 123456789998888
Q ss_pred ccceeeccCch----hHHHHHHhCCceec-ccccc
Q 011531 372 VGGFLTHGGWN----STLEGIAAGVPMIC-WPQFS 401 (483)
Q Consensus 372 ~~~~ItHgG~g----s~~eal~~GvP~l~-~P~~~ 401 (483)
+++++--.... -+.+|+.+|+++++ =|+..
T Consensus 89 vD~V~I~tp~~~H~~~~~~al~aGkhVl~EKPla~ 123 (361)
T 3u3x_A 89 IGLIVSAAVSSERAELAIRAMQHGKDVLVDKPGMT 123 (361)
T ss_dssp CCEEEECCCHHHHHHHHHHHHHTTCEEEEESCSCS
T ss_pred CCEEEEeCChHHHHHHHHHHHHCCCeEEEeCCCCC
Confidence 88888554433 36778889998887 46544
No 297
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=23.56 E-value=66 Score=28.23 Aligned_cols=33 Identities=15% Similarity=-0.043 Sum_probs=24.2
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeC
Q 011531 8 PHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNT 43 (483)
Q Consensus 8 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~ 43 (483)
||.++++.++.| + -.++++.|+++|++|+++.-
T Consensus 1 Mk~vlVTGas~g-I--G~~ia~~l~~~G~~V~~~~r 33 (254)
T 1zmt_A 1 MSTAIVTNVKHF-G--GMGSALRLSEAGHTVACHDE 33 (254)
T ss_dssp -CEEEESSTTST-T--HHHHHHHHHHTTCEEEECCG
T ss_pred CeEEEEeCCCch-H--HHHHHHHHHHCCCEEEEEeC
Confidence 456777776644 2 46799999999999987654
No 298
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=23.55 E-value=76 Score=28.79 Aligned_cols=39 Identities=10% Similarity=0.032 Sum_probs=31.7
Q ss_pred CCE-EEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCCC
Q 011531 7 NPH-VVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTDH 45 (483)
Q Consensus 7 ~~~-il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~ 45 (483)
++| |+|..-|+-|=..-...||..|+++|++|.++-.+.
T Consensus 40 ~~~vI~v~~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 79 (307)
T 3end_A 40 GAKVFAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIGCDP 79 (307)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEESS
T ss_pred CceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 444 455555788999999999999999999999997653
No 299
>1ny5_A Transcriptional regulator (NTRC family); AAA+ ATPase, sigma54 activator, bacterial transcription, DIM transcription; HET: ADP; 2.40A {Aquifex aeolicus} SCOP: c.23.1.1 c.37.1.20 PDB: 1ny6_A* 3m0e_A* 1zy2_A*
Probab=23.49 E-value=2.1e+02 Score=26.97 Aligned_cols=59 Identities=8% Similarity=0.048 Sum_probs=39.8
Q ss_pred hCCceeccccccchhHHHHHHHHhhccceecCCCCCHHHHHHHHHHHHhHhHHHHHHHHHHHH
Q 011531 390 AGVPMICWPQFSDQLVNSRCVSEVWKIGFDMKDTCDGSIIEKLVRDLMENKREEIMGSTDRVA 452 (483)
Q Consensus 390 ~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~~i~~ll~~~~~~~~~~a~~l~ 452 (483)
..+|+|++.-..+...-...+ + .|+--.+.+.++.+.|..+|.+++.. ...++....++
T Consensus 71 ~~~pvIvlT~~~~~~~~~~a~-~-~Ga~dyl~KP~~~~~L~~~i~~~l~~--~~l~~~~~~l~ 129 (387)
T 1ny5_A 71 PETEVIVITGHGTIKTAVEAM-K-MGAYDFLTKPCMLEEIELTINKAIEH--RKLRKENELLR 129 (387)
T ss_dssp TTSEEEEEEETTCHHHHHHHH-T-TTCCEEEEESCCHHHHHHHHHHHHHH--HHHHHHHHHHH
T ss_pred CCCcEEEEeCCCCHHHHHHHH-h-cCceEEecCCCCHHHHHHHHHHHHHH--HHHHHHHHHhh
Confidence 467888887666554444444 4 67766676789999999999999875 44444433333
No 300
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=23.49 E-value=3.7e+02 Score=24.92 Aligned_cols=39 Identities=13% Similarity=0.150 Sum_probs=27.7
Q ss_pred CCEEEEEcCCCC--CCHHHHHHHHHHHHhCCcEEEEEeCCC
Q 011531 7 NPHVVLLPYPLQ--GHIKPMMSLAELLGSANFQVTFVNTDH 45 (483)
Q Consensus 7 ~~~il~~~~~~~--GH~~p~l~La~~L~~rGH~V~~~~~~~ 45 (483)
..++++++.++. ....-+..+++.|.+.+.++.+++.+.
T Consensus 241 ~~~~vlv~~G~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~ 281 (412)
T 3otg_A 241 ARPLVYLTLGTSSGGTVEVLRAAIDGLAGLDADVLVASGPS 281 (412)
T ss_dssp TSCEEEEECTTTTCSCHHHHHHHHHHHHTSSSEEEEECCSS
T ss_pred CCCEEEEEcCCCCcCcHHHHHHHHHHHHcCCCEEEEEECCC
Confidence 345666777666 344557778888888899988887754
No 301
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=23.46 E-value=74 Score=30.07 Aligned_cols=38 Identities=5% Similarity=0.123 Sum_probs=29.8
Q ss_pred CCEEEEEcCCCCCC----HHHHHHHHHHH-HhCCcEEEEEeCC
Q 011531 7 NPHVVLLPYPLQGH----IKPMMSLAELL-GSANFQVTFVNTD 44 (483)
Q Consensus 7 ~~~il~~~~~~~GH----~~p~l~La~~L-~~rGH~V~~~~~~ 44 (483)
++||+++..|..+- +.-...++++| .++||+|+.+...
T Consensus 3 k~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~~g~~v~~i~~~ 45 (377)
T 1ehi_A 3 KKRVALIFGGNSSEHDVSKRSAQNFYNAIEATGKYEIIVFAIA 45 (377)
T ss_dssp CEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHSSEEEEEEEEC
T ss_pred CcEEEEEeCCCCCCcceeHHHHHHHHHHhCcccCcEEEEEEEc
Confidence 68998887765553 33578899999 9999999998753
No 302
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=23.34 E-value=81 Score=25.93 Aligned_cols=39 Identities=13% Similarity=0.212 Sum_probs=29.1
Q ss_pred CCEEEEEcCCCC---CCHHHHHHHHHHHHhCCcEEEEEeCCC
Q 011531 7 NPHVVLLPYPLQ---GHIKPMMSLAELLGSANFQVTFVNTDH 45 (483)
Q Consensus 7 ~~~il~~~~~~~---GH~~p~l~La~~L~~rGH~V~~~~~~~ 45 (483)
+.+|+++|.-+. --.++...|++.|.++|.+|.|.-+|-
T Consensus 23 A~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPV 64 (180)
T 1pno_A 23 ASKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHPV 64 (180)
T ss_dssp CSEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 456777665211 235688999999999999999999863
No 303
>3dff_A Teicoplanin pseudoaglycone deacetylases ORF2; lipoglycopeptide, zinc dependen hydrolase; HET: MSE PG4; 1.60A {Actinoplanes teichomyceticus} PDB: 2x9l_A* 3dfk_A* 3dfm_A 2xad_A*
Probab=23.30 E-value=78 Score=28.46 Aligned_cols=42 Identities=7% Similarity=-0.001 Sum_probs=25.8
Q ss_pred CCCCCCCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEe
Q 011531 1 MERSHVNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVN 42 (483)
Q Consensus 1 ~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~ 42 (483)
|...-.+++++++.-.----..-+-.+...++++|++|++++
T Consensus 1 ~~~~~~~~rvLvv~aHPDDe~lg~GGtia~~~~~G~~V~vv~ 42 (273)
T 3dff_A 1 MPHDPGATRLLAISPHLDDAVLSFGAGLAQAAQDGANVLVYT 42 (273)
T ss_dssp -------CEEEEEESSTTHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCCCCCEEEEEeCCChHHHhHHHHHHHHHHCCCcEEEEE
Confidence 444445678777665544445566677777888999999987
No 304
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=23.21 E-value=2.2e+02 Score=25.67 Aligned_cols=114 Identities=10% Similarity=0.020 Sum_probs=69.8
Q ss_pred HHHHHHHHhCCCeEEEEEcCCccCCCCCCCCCChhhhhhcCCCceeEEeccCHHHHhccCCccceeeccCchhHHHHHHh
Q 011531 311 SELWHGLVNRGQRFLLVVRPDLILGEPGAAETPLAQNEGTEERNRFIVSWAPQEEVLAHPAVGGFLTHGGWNSTLEGIAA 390 (483)
Q Consensus 311 ~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~ItHgG~gs~~eal~~ 390 (483)
..+++.++..+..+++.. |.-..+++.+.+..+.+ ++-.+ ..+| |+ ..|.+.+..|+.+
T Consensus 155 ~~~~~~l~~~~~Dlivla--------gym~il~~~~l~~~~~~-~iNiH----pSlL--P~------~rG~~p~~~Ai~~ 213 (287)
T 3nrb_A 155 SQIKNIVTQSQADLIVLA--------RYMQILSDDLSAFLSGR-CINIH----HSFL--PG------FKGAKPYHQAHTR 213 (287)
T ss_dssp HHHHHHHHHHTCSEEEES--------SCCSCCCHHHHHHHTTS-EEEEE----SSCT--TT------TCSSCHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEhh--------hhhhhcCHHHHhhccCC-eEEEC----cccc--cC------CCCchHHHHHHHc
Confidence 457788888788888777 44447888887766554 33221 1223 22 4689999999999
Q ss_pred CCceecccccc--chhHHHHHHHHhhccceecCCCCCHHHHHHHHHHHHhHhHHHHHHHHHHH
Q 011531 391 GVPMICWPQFS--DQLVNSRCVSEVWKIGFDMKDTCDGSIIEKLVRDLMENKREEIMGSTDRV 451 (483)
Q Consensus 391 GvP~l~~P~~~--DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~~i~~ll~~~~~~~~~~a~~l 451 (483)
|+....+-.+. +..+....+. .--+.+...-|.++|.+.+.++-. .-|.+..+.+
T Consensus 214 G~k~tG~Tvh~v~~~lD~GpIi~---Q~~v~i~~~dt~~~L~~r~~~~e~---~~l~~av~~~ 270 (287)
T 3nrb_A 214 GVKLIGATAHFVTADLDEGPIIA---QDVEHVSHRDSAEDLVRKGRDIER---RVLSRAVLLF 270 (287)
T ss_dssp TCSEEEEEEEECCSSSSCCCEEE---EEEEECCTTCCHHHHHHHHHHHHH---HHHHHHHHHH
T ss_pred CCCeEEEEEEEECCCCcCCCEEE---EEEEecCCCCCHHHHHHHHHHHHH---HHHHHHHHHH
Confidence 99998887653 2222222221 112233345688888888776633 4555555544
No 305
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=23.20 E-value=60 Score=29.71 Aligned_cols=33 Identities=24% Similarity=0.194 Sum_probs=26.2
Q ss_pred CCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeC
Q 011531 6 VNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNT 43 (483)
Q Consensus 6 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~ 43 (483)
..+||.|+..|..| ..+|+.|+++||+|+++..
T Consensus 20 ~m~~I~iIG~G~mG-----~~~A~~l~~~G~~V~~~dr 52 (310)
T 3doj_A 20 HMMEVGFLGLGIMG-----KAMSMNLLKNGFKVTVWNR 52 (310)
T ss_dssp CSCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred cCCEEEEECccHHH-----HHHHHHHHHCCCeEEEEeC
Confidence 34789998766544 6789999999999998765
No 306
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=23.17 E-value=1.5e+02 Score=25.82 Aligned_cols=39 Identities=13% Similarity=0.036 Sum_probs=26.1
Q ss_pred CCCCCCCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeC
Q 011531 1 MERSHVNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNT 43 (483)
Q Consensus 1 ~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~ 43 (483)
|+.+.+..+ ++++.++.| =-..+++.|+++|++|+++.-
T Consensus 1 m~~~~~~k~-vlITGasgg---iG~~la~~l~~~G~~V~~~~r 39 (264)
T 2pd6_A 1 MQNRLRSAL-ALVTGAGSG---IGRAVSVRLAGEGATVAACDL 39 (264)
T ss_dssp CCCCCTTCE-EEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CccccCCCE-EEEECCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 555444444 455554432 246789999999999998865
No 307
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=23.12 E-value=95 Score=27.57 Aligned_cols=34 Identities=18% Similarity=0.133 Sum_probs=26.0
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeC
Q 011531 7 NPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNT 43 (483)
Q Consensus 7 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~ 43 (483)
+-|.++++.++.| =-.++|++|+++|++|+++..
T Consensus 27 ~~k~vlVTGas~g---IG~aia~~la~~G~~V~~~~~ 60 (269)
T 4dmm_A 27 TDRIALVTGASRG---IGRAIALELAAAGAKVAVNYA 60 (269)
T ss_dssp TTCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 3467788877643 356889999999999998765
No 308
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=23.06 E-value=1e+02 Score=27.72 Aligned_cols=38 Identities=8% Similarity=-0.033 Sum_probs=27.8
Q ss_pred CCEEEEEcCCCC-CCHH---HHHHHHHHHHhCCcEEEEEeCC
Q 011531 7 NPHVVLLPYPLQ-GHIK---PMMSLAELLGSANFQVTFVNTD 44 (483)
Q Consensus 7 ~~~il~~~~~~~-GH~~---p~l~La~~L~~rGH~V~~~~~~ 44 (483)
++||+++..+.. -|-. ....++++|.++||+|.++...
T Consensus 2 ~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~~~ 43 (306)
T 1iow_A 2 TDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPK 43 (306)
T ss_dssp CCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred CcEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEecC
Confidence 478888876532 2222 3467999999999999988874
No 309
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=23.06 E-value=90 Score=23.37 Aligned_cols=27 Identities=11% Similarity=0.049 Sum_probs=21.8
Q ss_pred CCCHHHHHHHHHHHHhC-Cc-EEEEEeCC
Q 011531 18 QGHIKPMMSLAELLGSA-NF-QVTFVNTD 44 (483)
Q Consensus 18 ~GH~~p~l~La~~L~~r-GH-~V~~~~~~ 44 (483)
.......+.+|..+.+. || +|.++-..
T Consensus 15 ~~~~~~al~~a~~~~~~~g~~~v~vff~~ 43 (117)
T 1jx7_A 15 SESLFNSLRLAIALREQESNLDLRLFLMS 43 (117)
T ss_dssp CSHHHHHHHHHHHHHHHCTTCEEEEEECG
T ss_pred cHHHHHHHHHHHHHHhcCCCccEEEEEEc
Confidence 34566779999999999 99 99888773
No 310
>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A
Probab=23.00 E-value=86 Score=27.49 Aligned_cols=38 Identities=18% Similarity=0.160 Sum_probs=25.1
Q ss_pred CCEEEEEcCCCCCCH--HHHHHHHHHHHhCCcEEEEEeCC
Q 011531 7 NPHVVLLPYPLQGHI--KPMMSLAELLGSANFQVTFVNTD 44 (483)
Q Consensus 7 ~~~il~~~~~~~GH~--~p~l~La~~L~~rGH~V~~~~~~ 44 (483)
+.-++++..|..+|- ..+..+|+.|+++|+.|..+-.+
T Consensus 55 ~~p~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~Vl~~D~r 94 (259)
T 4ao6_A 55 SDRLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDGP 94 (259)
T ss_dssp CSEEEEEEC--------CHHHHHHHHHHHTTEEEEEECCC
T ss_pred CCCEEEEeCCCcccccchHHHHHHHHHHHCCCeEEeeccC
Confidence 445677777766763 35788999999999999987664
No 311
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=22.93 E-value=57 Score=28.67 Aligned_cols=34 Identities=18% Similarity=0.173 Sum_probs=25.8
Q ss_pred CCCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeC
Q 011531 5 HVNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNT 43 (483)
Q Consensus 5 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~ 43 (483)
-..+||.|+..|..| ..+|+.|+++||+|++...
T Consensus 17 ~~~~kIgiIG~G~mG-----~alA~~L~~~G~~V~~~~r 50 (245)
T 3dtt_A 17 FQGMKIAVLGTGTVG-----RTMAGALADLGHEVTIGTR 50 (245)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEES
T ss_pred cCCCeEEEECCCHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 346899999666543 5689999999999998865
No 312
>3dfi_A Pseudoaglycone deacetylase DBV21; single alpha-beta domain, hydrolase; 2.10A {Actinoplanes teichomyceticus}
Probab=22.85 E-value=89 Score=28.01 Aligned_cols=42 Identities=10% Similarity=0.039 Sum_probs=27.3
Q ss_pred CCCCCCCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEe
Q 011531 1 MERSHVNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVN 42 (483)
Q Consensus 1 ~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~ 42 (483)
|.+.-..++++++.-.----..-+-.+.-.++++|++|++++
T Consensus 1 ~~~~~~~~rvLvv~aHPDDe~l~~GGtia~~~~~G~~V~vv~ 42 (270)
T 3dfi_A 1 MLQDADRTRILAISPHLDDAVLSVGASLAQAEQDGGKVTVFT 42 (270)
T ss_dssp -----CCSEEEEEESSTTHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCCCCCCEEEEEeCCchHHHhhHHHHHHHHhCCCeEEEEE
Confidence 555555678877665554445666667777888999999986
No 313
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=22.81 E-value=83 Score=25.95 Aligned_cols=39 Identities=15% Similarity=0.159 Sum_probs=29.1
Q ss_pred CCEEEEEcCCC--C-CCHHHHHHHHHHHHhCCcEEEEEeCCC
Q 011531 7 NPHVVLLPYPL--Q-GHIKPMMSLAELLGSANFQVTFVNTDH 45 (483)
Q Consensus 7 ~~~il~~~~~~--~-GH~~p~l~La~~L~~rGH~V~~~~~~~ 45 (483)
+.+|+++|.-+ - --.++...|++.|.++|.+|.|.-+|-
T Consensus 22 A~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPV 63 (184)
T 1d4o_A 22 ANSIIITPGYGLCAAKAQYPIADLVKMLSEQGKKVRFGIHPV 63 (184)
T ss_dssp CSEEEEEECHHHHHTTTHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 35677776521 1 235689999999999999999999863
No 314
>2zts_A Putative uncharacterized protein PH0186; KAIC like protein, ATP-binding, nucleotide-binding, ATP- binding protein; HET: ADP; 2.07A {Pyrococcus horikoshii}
Probab=22.74 E-value=59 Score=28.15 Aligned_cols=45 Identities=16% Similarity=-0.003 Sum_probs=33.6
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHH-HHhCCcEEEEEeCCCchhhhhh
Q 011531 8 PHVVLLPYPLQGHIKPMMSLAEL-LGSANFQVTFVNTDHNHDLLLR 52 (483)
Q Consensus 8 ~~il~~~~~~~GH~~p~l~La~~-L~~rGH~V~~~~~~~~~~~~~~ 52 (483)
--+++..-|+.|-..-.+.++.. +.+.|..|.+++.+...+.+.+
T Consensus 31 ~l~~i~G~pG~GKT~l~l~~~~~~~~~~~~~v~~~s~E~~~~~~~~ 76 (251)
T 2zts_A 31 TTVLLTGGTGTGKTTFAAQFIYKGAEEYGEPGVFVTLEERARDLRR 76 (251)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHHHHHCCCEEEEESSSCHHHHHH
T ss_pred eEEEEEeCCCCCHHHHHHHHHHHHHHhcCCCceeecccCCHHHHHH
Confidence 34577777899999999998766 4556889999998766555543
No 315
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=22.73 E-value=1.2e+02 Score=28.59 Aligned_cols=39 Identities=15% Similarity=0.232 Sum_probs=23.1
Q ss_pred CCEEEEEcCCCCC----------CHHHHHHHHHHHHhCCcEEEEEeCCC
Q 011531 7 NPHVVLLPYPLQG----------HIKPMMSLAELLGSANFQVTFVNTDH 45 (483)
Q Consensus 7 ~~~il~~~~~~~G----------H~~p~l~La~~L~~rGH~V~~~~~~~ 45 (483)
..+++++++|+.+ ....+..+.+.|.+.+.+|++++...
T Consensus 226 ~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~v~~~~~~ 274 (398)
T 4fzr_A 226 KQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKLGFEVVVAVSDK 274 (398)
T ss_dssp SSCEEECC----------------CCSHHHHHHHGGGGTCEEEECCCC-
T ss_pred CCCEEEEEccCcccccccccccchHHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 3456777777764 23346778888888888888877643
No 316
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=22.68 E-value=90 Score=24.31 Aligned_cols=48 Identities=8% Similarity=-0.008 Sum_probs=35.6
Q ss_pred hCCceeccccccchhHHHHHHHHhhccceecCCCCCHHHHHHHHHHHHhH
Q 011531 390 AGVPMICWPQFSDQLVNSRCVSEVWKIGFDMKDTCDGSIIEKLVRDLMEN 439 (483)
Q Consensus 390 ~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~~i~~ll~~ 439 (483)
..+|+|++--..|.......+ + .|+--.+.+.++.+.|.++|.+++..
T Consensus 88 ~~~~ii~~s~~~~~~~~~~~~-~-~g~~~~l~Kp~~~~~l~~~i~~~~~~ 135 (152)
T 3eul_A 88 LPTRVLLISAHDEPAIVYQAL-Q-QGAAGFLLKDSTRTEIVKAVLDCAKG 135 (152)
T ss_dssp CSCEEEEEESCCCHHHHHHHH-H-TTCSEEEETTCCHHHHHHHHHHHHHC
T ss_pred CCCeEEEEEccCCHHHHHHHH-H-cCCCEEEecCCCHHHHHHHHHHHHcC
Confidence 357777776666655544444 4 68776776889999999999999985
No 317
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=22.66 E-value=4.3e+02 Score=23.91 Aligned_cols=62 Identities=15% Similarity=0.081 Sum_probs=36.6
Q ss_pred ccCHHHHhccCCccceeeccCch----hHHHHHHhCCceecc-cccc--chhHHHHHHHHhhccceecC
Q 011531 360 WAPQEEVLAHPAVGGFLTHGGWN----STLEGIAAGVPMICW-PQFS--DQLVNSRCVSEVWKIGFDMK 421 (483)
Q Consensus 360 ~~p~~~ll~~~~~~~~ItHgG~g----s~~eal~~GvP~l~~-P~~~--DQ~~na~~v~~~~G~G~~l~ 421 (483)
+-...+++..+++++++---... -+.+|+.+|+++++= |+.. ++-.-...++++.|+-+.+.
T Consensus 56 ~~~~~~ll~~~~~D~V~i~tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~v~ 124 (329)
T 3evn_A 56 YDKLEDMLADESIDVIYVATINQDHYKVAKAALLAGKHVLVEKPFTLTYDQANELFALAESCNLFLMEA 124 (329)
T ss_dssp ESCHHHHHTCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHTTCCEEEE
T ss_pred cCCHHHHhcCCCCCEEEECCCcHHHHHHHHHHHHCCCeEEEccCCcCCHHHHHHHHHHHHHcCCEEEEE
Confidence 44578889877777777544333 467789999998762 5543 33333333334456555443
No 318
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=22.59 E-value=1e+02 Score=25.85 Aligned_cols=36 Identities=11% Similarity=0.111 Sum_probs=28.2
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeC
Q 011531 8 PHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNT 43 (483)
Q Consensus 8 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~ 43 (483)
..++++..+..|...-+..+++.|+++|+.|..+..
T Consensus 28 ~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~ 63 (236)
T 1zi8_A 28 APVIVIAQDIFGVNAFMRETVSWLVDQGYAAVCPDL 63 (236)
T ss_dssp EEEEEEECCTTBSCHHHHHHHHHHHHTTCEEEEECG
T ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHhCCcEEEeccc
Confidence 445566666667777889999999999999887764
No 319
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=22.56 E-value=65 Score=24.37 Aligned_cols=39 Identities=10% Similarity=-0.033 Sum_probs=25.0
Q ss_pred CCCCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEe
Q 011531 4 SHVNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVN 42 (483)
Q Consensus 4 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~ 42 (483)
..+++||+++|..+-|--.-...+=+...++|.+|.+..
T Consensus 3 ~~~~mkIlL~C~aGmSTsllv~km~~~a~~~gi~v~i~a 41 (108)
T 3nbm_A 3 ASKELKVLVLCAGSGTSAQLANAINEGANLTEVRVIANS 41 (108)
T ss_dssp --CCEEEEEEESSSSHHHHHHHHHHHHHHHHTCSEEEEE
T ss_pred cccCceEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEE
Confidence 467899999999876444433444444445788888755
No 320
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=22.49 E-value=1e+02 Score=23.44 Aligned_cols=47 Identities=9% Similarity=0.072 Sum_probs=35.6
Q ss_pred CCceeccccccchhHHHHHHHHhhccceecCCCCCHHHHHHHHHHHHhH
Q 011531 391 GVPMICWPQFSDQLVNSRCVSEVWKIGFDMKDTCDGSIIEKLVRDLMEN 439 (483)
Q Consensus 391 GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~~i~~ll~~ 439 (483)
.+|+|++--..+...-.+.+ + .|+--.+.+.++.++|.++|++++..
T Consensus 78 ~~pii~~t~~~~~~~~~~~~-~-~ga~~~l~KP~~~~~L~~~i~~~l~~ 124 (136)
T 3t6k_A 78 TLPILMLTAQGDISAKIAGF-E-AGANDYLAKPFEPQELVYRVKNILAR 124 (136)
T ss_dssp TCCEEEEECTTCHHHHHHHH-H-HTCSEEEETTCCHHHHHHHHHHHHHC
T ss_pred CccEEEEecCCCHHHHHHHH-h-cCcceEEeCCCCHHHHHHHHHHHHhc
Confidence 67888877666555444444 4 68777777889999999999999974
No 321
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=22.45 E-value=85 Score=27.27 Aligned_cols=36 Identities=11% Similarity=0.021 Sum_probs=28.7
Q ss_pred CCEEEEEcC--CCCCCHHHHHHHHHHHHhCCcEEEEEe
Q 011531 7 NPHVVLLPY--PLQGHIKPMMSLAELLGSANFQVTFVN 42 (483)
Q Consensus 7 ~~~il~~~~--~~~GH~~p~l~La~~L~~rGH~V~~~~ 42 (483)
+||-+|++. ..-|-..-...|++.|+++|++|.++-
T Consensus 3 ~mk~i~Itgt~t~vGKT~vt~~L~~~l~~~G~~V~~~K 40 (228)
T 3of5_A 3 AMKKFFIIGTDTEVGKTYISTKLIEVCEHQNIKSLCLK 40 (228)
T ss_dssp TCEEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCcEEEEEeCCCCCCHHHHHHHHHHHHHHCCCeeEEec
Confidence 455555444 466899999999999999999999874
No 322
>1f9y_A HPPK, protein (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase); pyrophosphoryl transfer, catalytic mechanism, folate, ternary complex; HET: APC HHR; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1eqm_A* 1hka_A 1q0n_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 3h4a_A* 3ip0_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A ...
Probab=22.44 E-value=1.1e+02 Score=24.99 Aligned_cols=28 Identities=25% Similarity=0.311 Sum_probs=23.6
Q ss_pred EEEEecCcccCCCHHHHHHHHHHHHhCC
Q 011531 294 VLYVSFGSLVGLTREQMSELWHGLVNRG 321 (483)
Q Consensus 294 vi~vs~Gs~~~~~~~~~~~~~~a~~~~~ 321 (483)
.+|+++||........+...+.+++..+
T Consensus 2 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 29 (158)
T 1f9y_A 2 VAYIAIGSNLASPLEQVNAALKALGDIP 29 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEecCccCHHHHHHHHHHHHhcCC
Confidence 4899999999877888888888888753
No 323
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=22.33 E-value=1.4e+02 Score=27.02 Aligned_cols=38 Identities=16% Similarity=0.107 Sum_probs=24.3
Q ss_pred CCCCEEEEEcC-CCCCCHHH--HHHHHHHHHhCCcEEEEEe
Q 011531 5 HVNPHVVLLPY-PLQGHIKP--MMSLAELLGSANFQVTFVN 42 (483)
Q Consensus 5 ~~~~~il~~~~-~~~GH~~p--~l~La~~L~~rGH~V~~~~ 42 (483)
...|||+++.. |-..-++- .-...+.|.++||+|+++-
T Consensus 20 m~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G~eV~v~D 60 (280)
T 4gi5_A 20 FQSMKVLLIYAHPEPRSLNGALKNFAIRHLQQAGHEVQVSD 60 (280)
T ss_dssp --CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hhCCeEEEEEeCCCCccHHHHHHHHHHHHHHHCCCeEEEEE
Confidence 45689976654 44433433 2346778889999999875
No 324
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=22.27 E-value=1.6e+02 Score=22.76 Aligned_cols=48 Identities=13% Similarity=0.059 Sum_probs=35.7
Q ss_pred hCCceeccccccchhHHHHHHHHhhc-cceecCCCCCHHHHHHHHHHHHhH
Q 011531 390 AGVPMICWPQFSDQLVNSRCVSEVWK-IGFDMKDTCDGSIIEKLVRDLMEN 439 (483)
Q Consensus 390 ~GvP~l~~P~~~DQ~~na~~v~~~~G-~G~~l~~~~~~~~l~~~i~~ll~~ 439 (483)
..+|+|++--..+.......+ + .| +--.+.+.++.+.|.++|.++++.
T Consensus 85 ~~~~ii~~s~~~~~~~~~~~~-~-~g~~~~~l~KP~~~~~l~~~i~~~l~~ 133 (153)
T 3hv2_A 85 PSTTRILLTGDPDLKLIAKAI-N-EGEIYRYLSKPWDDQELLLALRQALEH 133 (153)
T ss_dssp TTSEEEEECCCCCHHHHHHHH-H-TTCCSEEECSSCCHHHHHHHHHHHHHH
T ss_pred CCCeEEEEECCCCHHHHHHHH-h-CCCcceEEeCCCCHHHHHHHHHHHHHH
Confidence 467888877666655555555 4 57 656666889999999999999984
No 325
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=22.26 E-value=1.2e+02 Score=23.31 Aligned_cols=47 Identities=4% Similarity=0.053 Sum_probs=35.4
Q ss_pred hCCceeccccccchhHHHHHHHHhhccceecCCCC-CHHHHHHHHHHHHh
Q 011531 390 AGVPMICWPQFSDQLVNSRCVSEVWKIGFDMKDTC-DGSIIEKLVRDLME 438 (483)
Q Consensus 390 ~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~-~~~~l~~~i~~ll~ 438 (483)
..+|+|++--..|...-.+.+ + .|+--.+.+.+ +.+.|.++|+++++
T Consensus 80 ~~~pii~~s~~~~~~~~~~~~-~-~ga~~~l~Kp~~~~~~l~~~i~~~l~ 127 (144)
T 3kht_A 80 QHTPIVILTDNVSDDRAKQCM-A-AGASSVVDKSSNNVTDFYGRIYAIFS 127 (144)
T ss_dssp TTCCEEEEETTCCHHHHHHHH-H-TTCSEEEECCTTSHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHH-H-cCCCEEEECCCCcHHHHHHHHHHHHH
Confidence 367888887666655544444 4 68777777778 99999999999987
No 326
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=22.25 E-value=91 Score=27.45 Aligned_cols=34 Identities=6% Similarity=-0.037 Sum_probs=25.5
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeC
Q 011531 7 NPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNT 43 (483)
Q Consensus 7 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~ 43 (483)
+-|.++++.++.| =-.++|++|+++|++|+++..
T Consensus 7 ~~k~vlVTGas~G---IG~aia~~la~~G~~V~~~~~ 40 (259)
T 3edm_A 7 TNRTIVVAGAGRD---IGRACAIRFAQEGANVVLTYN 40 (259)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCEEEEECCCch---HHHHHHHHHHHCCCEEEEEcC
Confidence 3466777776653 346899999999999998754
No 327
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=22.15 E-value=1.9e+02 Score=23.19 Aligned_cols=39 Identities=8% Similarity=-0.008 Sum_probs=30.4
Q ss_pred CCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCCC
Q 011531 6 VNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTDH 45 (483)
Q Consensus 6 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~ 45 (483)
+++||+|+.+++. ...=+....+.|.+.|++|.++++..
T Consensus 1 ~~~ki~il~~~g~-~~~e~~~~~~~l~~ag~~v~~vs~~~ 39 (168)
T 3l18_A 1 ASMKVLFLSADGF-EDLELIYPLHRIKEEGHEVYVASFQR 39 (168)
T ss_dssp CCCEEEEECCTTB-CHHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCcEEEEEeCCCc-cHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 4689999988864 44456667788999999999998743
No 328
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=22.08 E-value=58 Score=27.62 Aligned_cols=32 Identities=22% Similarity=0.196 Sum_probs=22.8
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeC
Q 011531 8 PHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNT 43 (483)
Q Consensus 8 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~ 43 (483)
|||+++. +.|.+ -..+++.|.++||+|+++..
T Consensus 1 m~i~iiG--a~G~~--G~~ia~~l~~~g~~V~~~~r 32 (212)
T 1jay_A 1 MRVALLG--GTGNL--GKGLALRLATLGHEIVVGSR 32 (212)
T ss_dssp CEEEEET--TTSHH--HHHHHHHHHTTTCEEEEEES
T ss_pred CeEEEEc--CCCHH--HHHHHHHHHHCCCEEEEEeC
Confidence 4777774 23333 24678999999999998765
No 329
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=22.02 E-value=28 Score=30.37 Aligned_cols=35 Identities=11% Similarity=0.199 Sum_probs=23.5
Q ss_pred CCCCCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeC
Q 011531 3 RSHVNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNT 43 (483)
Q Consensus 3 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~ 43 (483)
+...+.|++++.++ .--..+++.|.++|| |+++..
T Consensus 5 ~~~~~~~viI~G~G-----~~G~~la~~L~~~g~-v~vid~ 39 (234)
T 2aef_A 5 DVAKSRHVVICGWS-----ESTLECLRELRGSEV-FVLAED 39 (234)
T ss_dssp -----CEEEEESCC-----HHHHHHHHHSTTSEE-EEEESC
T ss_pred CCCCCCEEEEECCC-----hHHHHHHHHHHhCCe-EEEEEC
Confidence 34556889988764 233789999999999 887754
No 330
>2qx0_A 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase; 3-layered alpha-BATA-alpha fold, homodimer, ternary complex, transferase; HET: APC PH2; 1.80A {Yersinia pestis}
Probab=22.01 E-value=1.4e+02 Score=24.28 Aligned_cols=28 Identities=21% Similarity=0.363 Sum_probs=24.3
Q ss_pred EEEEecCcccCCCHHHHHHHHHHHHhCC
Q 011531 294 VLYVSFGSLVGLTREQMSELWHGLVNRG 321 (483)
Q Consensus 294 vi~vs~Gs~~~~~~~~~~~~~~a~~~~~ 321 (483)
.+|+++||........+...+.+++..+
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 30 (159)
T 2qx0_A 3 RVYIALGSNLAMPLQQVSAAREALAHLP 30 (159)
T ss_dssp EEEEEEEECSSSCHHHHHHHHHHHHTCT
T ss_pred EEEEEEeCchhhHHHHHHHHHHHHhcCC
Confidence 3899999999888888999999998754
No 331
>1oxz_A ADP-ribosylation factor binding protein GGA1; GAT domain, membrane protein; 2.80A {Homo sapiens} SCOP: a.7.8.1
Probab=21.92 E-value=2.3e+02 Score=23.80 Aligned_cols=38 Identities=21% Similarity=0.295 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCC----hHHHHHHHHHHHHHhh
Q 011531 442 EEIMGSTDRVATMARDAVNEGGS----SYRNLDGLIEDIRLMA 480 (483)
Q Consensus 442 ~~~~~~a~~l~~~~~~~~~~gg~----~~~~~~~l~~~l~~~~ 480 (483)
+..+.+++-|.+++..+ .+|+. ....+.+|.+..+.+.
T Consensus 79 e~V~~nv~LL~EML~~~-~pg~~~~~~d~Ell~eL~~~Ck~~q 120 (186)
T 1oxz_A 79 EEVNNNVKLLTEMVMSH-SQGGAAAGSSEDLMKELYQRCERMR 120 (186)
T ss_dssp HHHHHHHHHHHHHHHHT-SSSCSCTTTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhc-CCCccCccccHHHHHHHHHHHHHHH
Confidence 55777777777777764 44433 2355666666665544
No 332
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=21.85 E-value=2.3e+02 Score=25.66 Aligned_cols=108 Identities=15% Similarity=0.171 Sum_probs=59.9
Q ss_pred CCCCCEEEEEcCCCCCCHHHHHHHHHHHHhC--CcEEEEEeCCC--chhhhhhccccccccCCCCCeEEEeCCCCCCCCc
Q 011531 4 SHVNPHVVLLPYPLQGHIKPMMSLAELLGSA--NFQVTFVNTDH--NHDLLLRNTDITSFCNRFPNFQFRSIPSGLPANV 79 (483)
Q Consensus 4 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~r--GH~V~~~~~~~--~~~~~~~~~~~~~~~~~~~~v~f~~~p~~l~~~~ 79 (483)
..+++||+++..+. || -+.+|.++-.+. ..+|.++.+.. ....+++ ..++.+..+|....
T Consensus 86 ~~~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~i~~Visn~p~~~~~~A~----------~~gIp~~~~~~~~~--- 149 (288)
T 3obi_A 86 RETRRKVMLLVSQS-DH--CLADILYRWRVGDLHMIPTAIVSNHPRETFSGFD----------FGDIPFYHFPVNKD--- 149 (288)
T ss_dssp TTSCEEEEEEECSC-CH--HHHHHHHHHHTTSSCEEEEEEEESSCGGGSCCTT----------TTTCCEEECCCCTT---
T ss_pred cCCCcEEEEEEcCC-CC--CHHHHHHHHHCCCCCeEEEEEEcCCChhHHHHHH----------HcCCCEEEeCCCcc---
Confidence 34578998888876 44 344555554433 24666665522 2222222 22577777763211
Q ss_pred ccCCCCHHHHHHHHHHhchHHHHHHHHHhhhhhcCCCCccEEEEcCCCCcchHHHHHHcCCCeEEEecc
Q 011531 80 IRSGLTAKDVFDAMKAVSKPAFRDLLISLREETEQRQSPTCVIADGILCFLTLDVSEELQIPLLALRTH 148 (483)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~D~VI~D~~~~~~~~~~A~~lgIP~v~~~~~ 148 (483)
+ .......+.+.+++ .++|+||.-.+.-.....+-+.+.-.++-+.++
T Consensus 150 -----~--------r~~~~~~~~~~l~~--------~~~Dlivlagy~~il~~~~l~~~~~~~iNiHpS 197 (288)
T 3obi_A 150 -----T--------RRQQEAAITALIAQ--------THTDLVVLARYMQILSDEMSARLAGRCINIHHS 197 (288)
T ss_dssp -----T--------HHHHHHHHHHHHHH--------HTCCEEEESSCCSCCCHHHHHHTTTSEEEEEEE
T ss_pred -----c--------HHHHHHHHHHHHHh--------cCCCEEEhhhhhhhCCHHHHhhhcCCeEEeCcc
Confidence 0 11122334455555 469999998775432566667777677777553
No 333
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A
Probab=21.85 E-value=89 Score=26.30 Aligned_cols=36 Identities=19% Similarity=0.107 Sum_probs=28.3
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeC
Q 011531 8 PHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNT 43 (483)
Q Consensus 8 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~ 43 (483)
.+.+++..|..|+-.-+..+++.|.++|+.|..+-.
T Consensus 22 ~~~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~ 57 (251)
T 3dkr_A 22 DTGVVLLHAYTGSPNDMNFMARALQRSGYGVYVPLF 57 (251)
T ss_dssp SEEEEEECCTTCCGGGGHHHHHHHHHTTCEEEECCC
T ss_pred CceEEEeCCCCCCHHHHHHHHHHHHHCCCEEEecCC
Confidence 455666667777888889999999999999876654
No 334
>3tl4_X Glutaminyl-tRNA synthetase; glutamine, appended domain, hinge, tRNA LIG amidotransferase, ligase; 2.30A {Saccharomyces cerevisiae}
Probab=21.79 E-value=99 Score=26.03 Aligned_cols=24 Identities=13% Similarity=0.317 Sum_probs=20.8
Q ss_pred HhhccceecCCCCCHHHHHHHHHHHHhH
Q 011531 412 EVWKIGFDMKDTCDGSIIEKLVRDLMEN 439 (483)
Q Consensus 412 ~~~G~G~~l~~~~~~~~l~~~i~~ll~~ 439 (483)
+.-|+|+.+ |+|+|.++|.++++.
T Consensus 109 ~~cGVGV~V----T~EqI~~~V~~~i~~ 132 (187)
T 3tl4_X 109 ENSGVGIEI----TEDQVRNYVMQYIQE 132 (187)
T ss_dssp HTTTTTCCC----CHHHHHHHHHHHHHH
T ss_pred HHCCCCeEe----CHHHHHHHHHHHHHH
Confidence 457999888 899999999999974
No 335
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=21.72 E-value=1.3e+02 Score=27.60 Aligned_cols=33 Identities=12% Similarity=0.174 Sum_probs=24.7
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeC
Q 011531 8 PHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNT 43 (483)
Q Consensus 8 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~ 43 (483)
-|.++++.++.| + -..|++.|+++|++|+++.-
T Consensus 8 ~k~vlVTGas~g-I--G~~la~~l~~~G~~Vv~~~r 40 (319)
T 3ioy_A 8 GRTAFVTGGANG-V--GIGLVRQLLNQGCKVAIADI 40 (319)
T ss_dssp TCEEEEETTTST-H--HHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEcCCchH-H--HHHHHHHHHHCCCEEEEEEC
Confidence 456677776643 2 46889999999999987765
No 336
>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}
Probab=21.71 E-value=1.4e+02 Score=27.15 Aligned_cols=32 Identities=16% Similarity=0.132 Sum_probs=23.8
Q ss_pred CEEEEEcCC--CCCCHHHHHHHHHHHHhCCcEEEEEe
Q 011531 8 PHVVLLPYP--LQGHIKPMMSLAELLGSANFQVTFVN 42 (483)
Q Consensus 8 ~~il~~~~~--~~GH~~p~l~La~~L~~rGH~V~~~~ 42 (483)
-|+++++.+ +.| + -.++|+.|+++|++|+++.
T Consensus 9 ~k~~lVTGa~~s~G-I--G~aia~~la~~G~~Vv~~~ 42 (319)
T 2ptg_A 9 GKTAFVAGVADSNG-Y--GWAICKLLRAAGARVLVGT 42 (319)
T ss_dssp TCEEEEECCCCTTS-H--HHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEeCCCCCCc-H--HHHHHHHHHHCCCEEEEEe
Confidence 356677766 333 2 4688999999999999875
No 337
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=21.63 E-value=95 Score=27.29 Aligned_cols=37 Identities=16% Similarity=0.101 Sum_probs=28.0
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCC
Q 011531 8 PHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTD 44 (483)
Q Consensus 8 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~ 44 (483)
...+++..|..|+..-+..+++.|.++|+.|..+-.+
T Consensus 46 ~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~ 82 (315)
T 4f0j_A 46 GRTILLMHGKNFCAGTWERTIDVLADAGYRVIAVDQV 82 (315)
T ss_dssp SCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCT
T ss_pred CCeEEEEcCCCCcchHHHHHHHHHHHCCCeEEEeecC
Confidence 3445555556677777889999999999999877664
No 338
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=21.61 E-value=1.9e+02 Score=21.26 Aligned_cols=46 Identities=7% Similarity=0.044 Sum_probs=32.9
Q ss_pred CCceeccccccchhHHHHHHHHhhccceecCCCCCHHHHHHHHHHHHh
Q 011531 391 GVPMICWPQFSDQLVNSRCVSEVWKIGFDMKDTCDGSIIEKLVRDLME 438 (483)
Q Consensus 391 GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~~i~~ll~ 438 (483)
.+|++++--..+.....+.+ + .|+--.+.+.++.++|.++|++++.
T Consensus 79 ~~~ii~~s~~~~~~~~~~~~-~-~ga~~~l~KP~~~~~l~~~i~~~~~ 124 (128)
T 1jbe_A 79 ALPVLMVTAEAKKENIIAAA-Q-AGASGYVVKPFTAATLEEKLNKIFE 124 (128)
T ss_dssp TCCEEEEESSCCHHHHHHHH-H-TTCSEEEESSCCHHHHHHHHHHHHH
T ss_pred CCcEEEEecCccHHHHHHHH-H-hCcCceeecCCCHHHHHHHHHHHHH
Confidence 56777776555544444444 4 6876667688999999999999876
No 339
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=21.52 E-value=1.3e+02 Score=22.70 Aligned_cols=48 Identities=13% Similarity=0.095 Sum_probs=36.3
Q ss_pred hCCceeccccccchhHHHHHHHHhhccceecCCCCCHHHHHHHHHHHHhH
Q 011531 390 AGVPMICWPQFSDQLVNSRCVSEVWKIGFDMKDTCDGSIIEKLVRDLMEN 439 (483)
Q Consensus 390 ~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~~i~~ll~~ 439 (483)
..+|+|++--..|...-.+.+ + .|+--.+.+.++.++|.++|++++..
T Consensus 79 ~~~~ii~~s~~~~~~~~~~~~-~-~ga~~~l~KP~~~~~l~~~i~~~~~~ 126 (136)
T 3kto_A 79 FHLPTIVMASSSDIPTAVRAM-R-ASAADFIEKPFIEHVLVHDVQQIING 126 (136)
T ss_dssp CCCCEEEEESSCCHHHHHHHH-H-TTCSEEEESSBCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCHHHHHHHH-H-cChHHheeCCCCHHHHHHHHHHHHhc
Confidence 367888877666655444444 4 68777777889999999999999985
No 340
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=21.48 E-value=73 Score=31.20 Aligned_cols=26 Identities=27% Similarity=0.430 Sum_probs=21.9
Q ss_pred CCccEEEEcCCCCcchHHHHHHcCCCeEEE
Q 011531 116 QSPTCVIADGILCFLTLDVSEELQIPLLAL 145 (483)
Q Consensus 116 ~~~D~VI~D~~~~~~~~~~A~~lgIP~v~~ 145 (483)
.+||++|.+. . +..+|+++|||++.+
T Consensus 374 ~~pDllig~~---~-~~~~a~k~gip~~~~ 399 (458)
T 3pdi_B 374 GQAQLVIGNS---H-ALASARRLGVPLLRA 399 (458)
T ss_dssp HTCSEEEECT---T-HHHHHHHTTCCEEEC
T ss_pred cCCCEEEECh---h-HHHHHHHcCCCEEEe
Confidence 4799999983 3 678999999999985
No 341
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=21.42 E-value=1.1e+02 Score=25.80 Aligned_cols=33 Identities=15% Similarity=0.243 Sum_probs=23.1
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCC
Q 011531 8 PHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTD 44 (483)
Q Consensus 8 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~ 44 (483)
|||+++. +.|-+ -..|+++|.++||+|+.+.-.
T Consensus 1 M~ilItG--atG~i--G~~l~~~L~~~g~~V~~~~R~ 33 (219)
T 3dqp_A 1 MKIFIVG--STGRV--GKSLLKSLSTTDYQIYAGARK 33 (219)
T ss_dssp CEEEEES--TTSHH--HHHHHHHHTTSSCEEEEEESS
T ss_pred CeEEEEC--CCCHH--HHHHHHHHHHCCCEEEEEECC
Confidence 4665553 22322 368899999999999988763
No 342
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=21.39 E-value=69 Score=29.72 Aligned_cols=38 Identities=8% Similarity=0.144 Sum_probs=28.0
Q ss_pred CCEEEEEcCCCCCCHH----HHHHHHHHHHhCCcEEEEEeCC
Q 011531 7 NPHVVLLPYPLQGHIK----PMMSLAELLGSANFQVTFVNTD 44 (483)
Q Consensus 7 ~~~il~~~~~~~GH~~----p~l~La~~L~~rGH~V~~~~~~ 44 (483)
++||+++..|..+-.. -...++++|.+.||+|+.+...
T Consensus 3 ~~~v~vl~gG~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~~ 44 (343)
T 1e4e_A 3 RIKVAILFGGCSEEHDVSVKSAIEIAANINKEKYEPLYIGIT 44 (343)
T ss_dssp CEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred CcEEEEEeCCCCCCcchhHHHHHHHHHHhhhcCCEEEEEEEc
Confidence 6888888755333322 4677899999999999998753
No 343
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=21.38 E-value=4.2e+02 Score=23.25 Aligned_cols=38 Identities=8% Similarity=0.170 Sum_probs=22.5
Q ss_pred CCCEEEEEcCCCCCCHHH--HHHHHHHHHhCCcEEEEEeC
Q 011531 6 VNPHVVLLPYPLQGHIKP--MMSLAELLGSANFQVTFVNT 43 (483)
Q Consensus 6 ~~~~il~~~~~~~GH~~p--~l~La~~L~~rGH~V~~~~~ 43 (483)
++.+|+++.......+.- ...+-+++.++|+++.++..
T Consensus 3 ~~~~I~~i~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~ 42 (305)
T 3g1w_A 3 LNETYMMITFQSGMDYWKRCLKGFEDAAQALNVTVEYRGA 42 (305)
T ss_dssp --CEEEEEESSTTSTHHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred CCceEEEEEccCCChHHHHHHHHHHHHHHHcCCEEEEeCC
Confidence 456777766654444332 33556677778999987543
No 344
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=21.32 E-value=1.5e+02 Score=26.87 Aligned_cols=37 Identities=14% Similarity=0.084 Sum_probs=25.0
Q ss_pred CCCCCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeC
Q 011531 3 RSHVNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNT 43 (483)
Q Consensus 3 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~ 43 (483)
...+.++|++... .|.+ -..|++.|.++||+|+.+.-
T Consensus 7 ~~~~~~~vlVTGa--tG~i--G~~l~~~L~~~g~~V~~~~r 43 (342)
T 1y1p_A 7 VLPEGSLVLVTGA--NGFV--ASHVVEQLLEHGYKVRGTAR 43 (342)
T ss_dssp SSCTTCEEEEETT--TSHH--HHHHHHHHHHTTCEEEEEES
T ss_pred cCCCCCEEEEECC--ccHH--HHHHHHHHHHCCCEEEEEeC
Confidence 3444567665533 2433 35789999999999998775
No 345
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=21.29 E-value=1.6e+02 Score=25.77 Aligned_cols=39 Identities=18% Similarity=0.133 Sum_probs=24.8
Q ss_pred CCCCCCCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeC
Q 011531 1 MERSHVNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNT 43 (483)
Q Consensus 1 ~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~ 43 (483)
|..+-+. |.++++.++.| =-.++++.|+++||+|+++.-
T Consensus 1 M~~~l~~-k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r 39 (260)
T 1nff_A 1 MSGRLTG-KVALVSGGARG---MGASHVRAMVAEGAKVVFGDI 39 (260)
T ss_dssp -CCTTTT-CEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCCC-CEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 4433333 44555555432 246789999999999998765
No 346
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=21.28 E-value=45 Score=25.89 Aligned_cols=33 Identities=18% Similarity=0.189 Sum_probs=23.9
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCC
Q 011531 7 NPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTD 44 (483)
Q Consensus 7 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~ 44 (483)
..|++++..+..| ..+++.|.++|++|+++...
T Consensus 6 ~~~v~I~G~G~iG-----~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 6 NKQFAVIGLGRFG-----GSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CCSEEEECCSHHH-----HHHHHHHHHTTCCCEEEESC
T ss_pred CCcEEEECCCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 3467777653333 56789999999999988763
No 347
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=21.28 E-value=1.2e+02 Score=23.32 Aligned_cols=40 Identities=25% Similarity=0.356 Sum_probs=0.0
Q ss_pred HHHHHHhhhhhcCCCCccEEEEcCCCC--cchHHHHHHcC---------CCeEEEec
Q 011531 102 RDLLISLREETEQRQSPTCVIADGILC--FLTLDVSEELQ---------IPLLALRT 147 (483)
Q Consensus 102 ~~ll~~~~~~~~~~~~~D~VI~D~~~~--~~~~~~A~~lg---------IP~v~~~~ 147 (483)
.+.++.+.+ .+||+||.|...+ . |..+.+.+. +|++.++.
T Consensus 48 ~~al~~~~~-----~~~dlvl~D~~mp~~~-g~~~~~~lr~~~~~~~~~~pii~~s~ 98 (143)
T 3m6m_D 48 EQVLDAMAE-----EDYDAVIVDLHMPGMN-GLDMLKQLRVMQASGMRYTPVVVLSA 98 (143)
T ss_dssp HHHHHHHHH-----SCCSEEEEESCCSSSC-HHHHHHHHHHHHHTTCCCCCEEEEES
T ss_pred HHHHHHHhc-----CCCCEEEEeCCCCCCC-HHHHHHHHHhchhccCCCCeEEEEeC
No 348
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=21.12 E-value=92 Score=26.22 Aligned_cols=38 Identities=13% Similarity=0.220 Sum_probs=28.2
Q ss_pred CEEEEEcCCCC---CCHHHHHHHHHHHHhCCcEEEEEeCCC
Q 011531 8 PHVVLLPYPLQ---GHIKPMMSLAELLGSANFQVTFVNTDH 45 (483)
Q Consensus 8 ~~il~~~~~~~---GH~~p~l~La~~L~~rGH~V~~~~~~~ 45 (483)
.+|+++|.-+. =-.++...|++.|.++|.+|.|.-+|-
T Consensus 47 ~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 87 (203)
T 2fsv_C 47 SKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHPV 87 (203)
T ss_dssp SEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CcEEEEcCchHhHHHHHHHHHHHHHHHHHcCCeEEEEeccc
Confidence 46666665211 234678999999999999999999863
No 349
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=21.11 E-value=1.6e+02 Score=24.27 Aligned_cols=33 Identities=15% Similarity=0.256 Sum_probs=23.7
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCC
Q 011531 8 PHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTD 44 (483)
Q Consensus 8 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~ 44 (483)
++|+++. +.|- --..|++.|.++||+|+.+.-.
T Consensus 4 ~~ilVtG--atG~--iG~~l~~~l~~~g~~V~~~~r~ 36 (206)
T 1hdo_A 4 KKIAIFG--ATGQ--TGLTTLAQAVQAGYEVTVLVRD 36 (206)
T ss_dssp CEEEEES--TTSH--HHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEc--CCcH--HHHHHHHHHHHCCCeEEEEEeC
Confidence 5666653 3343 3467899999999999988763
No 350
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=21.08 E-value=2.9e+02 Score=25.43 Aligned_cols=109 Identities=11% Similarity=-0.019 Sum_probs=57.4
Q ss_pred eEEEEecCcccCCCHHHHHHHHHHHHhC-CCeEEEEEcCCccCCCCCCCCCChhhhhhcCCCceeEEeccCHHHHhccCC
Q 011531 293 SVLYVSFGSLVGLTREQMSELWHGLVNR-GQRFLLVVRPDLILGEPGAAETPLAQNEGTEERNRFIVSWAPQEEVLAHPA 371 (483)
Q Consensus 293 ~vi~vs~Gs~~~~~~~~~~~~~~a~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~ 371 (483)
.+.+|..|.+.. ..+.++... +..++.++..+. .....+.++. + +. .+-...+++..++
T Consensus 7 ~vgiiG~G~~g~-------~~~~~l~~~~~~~lvav~d~~~--------~~~~~~~~~~--g-~~--~~~~~~~~l~~~~ 66 (354)
T 3db2_A 7 GVAAIGLGRWAY-------VMADAYTKSEKLKLVTCYSRTE--------DKREKFGKRY--N-CA--GDATMEALLARED 66 (354)
T ss_dssp EEEEECCSHHHH-------HHHHHHTTCSSEEEEEEECSSH--------HHHHHHHHHH--T-CC--CCSSHHHHHHCSS
T ss_pred eEEEEccCHHHH-------HHHHHHHhCCCcEEEEEECCCH--------HHHHHHHHHc--C-CC--CcCCHHHHhcCCC
Confidence 578888887652 345666665 556665663210 0001111111 1 22 2556788887777
Q ss_pred ccceeeccC----chhHHHHHHhCCceecc-cccc--chhHHHHHHHHhhccceecC
Q 011531 372 VGGFLTHGG----WNSTLEGIAAGVPMICW-PQFS--DQLVNSRCVSEVWKIGFDMK 421 (483)
Q Consensus 372 ~~~~ItHgG----~gs~~eal~~GvP~l~~-P~~~--DQ~~na~~v~~~~G~G~~l~ 421 (483)
+++++---. .-.+.+|+.+|+++++= |+.. +|-.-...++++.|+-+.+.
T Consensus 67 ~D~V~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~~~~~~v~ 123 (354)
T 3db2_A 67 VEMVIITVPNDKHAEVIEQCARSGKHIYVEKPISVSLDHAQRIDQVIKETGVKFLCG 123 (354)
T ss_dssp CCEEEECSCTTSHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHCCCEEEE
T ss_pred CCEEEEeCChHHHHHHHHHHHHcCCEEEEccCCCCCHHHHHHHHHHHHHcCCeEEEe
Confidence 766764333 23466788889887762 5433 33333333334456655554
No 351
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=21.06 E-value=2.3e+02 Score=24.53 Aligned_cols=33 Identities=15% Similarity=0.214 Sum_probs=23.8
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCC
Q 011531 9 HVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTD 44 (483)
Q Consensus 9 ~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~ 44 (483)
|.++++.++.| =-..+++.|+++|++|+++...
T Consensus 5 k~vlVTGas~g---iG~~ia~~l~~~G~~V~~~~r~ 37 (255)
T 2q2v_A 5 KTALVTGSTSG---IGLGIAQVLARAGANIVLNGFG 37 (255)
T ss_dssp CEEEESSCSSH---HHHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 45666665532 3568999999999999987653
No 352
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=21.00 E-value=4.7e+02 Score=24.26 Aligned_cols=38 Identities=13% Similarity=0.037 Sum_probs=25.9
Q ss_pred CCEEEEEcCCCCCCH--HHHHHHHHHHHhCCcEEEEEeCC
Q 011531 7 NPHVVLLPYPLQGHI--KPMMSLAELLGSANFQVTFVNTD 44 (483)
Q Consensus 7 ~~~il~~~~~~~GH~--~p~l~La~~L~~rGH~V~~~~~~ 44 (483)
..+++++++|+.+.- .-+..+.+.|.+.+.++++.+.+
T Consensus 246 ~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~g~ 285 (415)
T 3rsc_A 246 DLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWHVVMTLGG 285 (415)
T ss_dssp CCCEEEEECTTTSCCCHHHHHHHHHHHTTSSCEEEEECTT
T ss_pred CCCEEEEECCCCCCChHHHHHHHHHHHhcCCcEEEEEeCC
Confidence 356677777776433 33667788888888888877664
No 353
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=21.00 E-value=2.9e+02 Score=25.56 Aligned_cols=38 Identities=13% Similarity=0.109 Sum_probs=26.2
Q ss_pred CCEEEEEcCCCCCCHH--HHHHHHHHHHhCCcEEEEEeCC
Q 011531 7 NPHVVLLPYPLQGHIK--PMMSLAELLGSANFQVTFVNTD 44 (483)
Q Consensus 7 ~~~il~~~~~~~GH~~--p~l~La~~L~~rGH~V~~~~~~ 44 (483)
..+++++++|+.+.-. -+..+.+.|.+.+.++.+.+.+
T Consensus 230 ~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 269 (402)
T 3ia7_A 230 DAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVMAIGG 269 (402)
T ss_dssp TCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEEEECCT
T ss_pred CCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEEEEeCC
Confidence 3456677777765443 4667788888888888877664
No 354
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=20.98 E-value=1.4e+02 Score=27.56 Aligned_cols=73 Identities=8% Similarity=0.160 Sum_probs=50.0
Q ss_pred CCHHHHHHHHHHHHhCCCeEEEEEcCCccCCCCCCCCCChhhhhhcCCCceeEEeccCHHHHhccCCccceeeccCchhH
Q 011531 305 LTREQMSELWHGLVNRGQRFLLVVRPDLILGEPGAAETPLAQNEGTEERNRFIVSWAPQEEVLAHPAVGGFLTHGGWNST 384 (483)
Q Consensus 305 ~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p~~~ll~~~~~~~~ItHgG~gs~ 384 (483)
.+.+....+.+++.+...+.||..+. +. +- .++.++++.+.+-++|.. ||-+.-..++
T Consensus 62 td~~Ra~dL~~a~~Dp~i~aI~~~rG-------G~------------g~-~rlL~~LD~~~i~~~PK~--~~GySDiT~L 119 (327)
T 4h1h_A 62 SIRSRVADIHEAFNDSSVKAILTVIG-------GF------------NS-NQLLPYLDYDLISENPKI--LCGFSDITAL 119 (327)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCC-------CS------------CG-GGGGGGCCHHHHHHSCCE--EEECTTHHHH
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEcCC-------ch------------hH-HHHhhhcchhhhccCCeE--EEecccccHH
Confidence 34455667888888877788887752 21 11 566678888888888887 8888888888
Q ss_pred HHHHH--hCCceecccc
Q 011531 385 LEGIA--AGVPMICWPQ 399 (483)
Q Consensus 385 ~eal~--~GvP~l~~P~ 399 (483)
.-+++ .|+..+.=|.
T Consensus 120 ~~al~~~~g~~t~hGp~ 136 (327)
T 4h1h_A 120 ATAIYTQTELITYSGAH 136 (327)
T ss_dssp HHHHHHHHCBCEEECCC
T ss_pred HHHHHHhcCeEEEeCcc
Confidence 88875 3655554443
No 355
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=20.94 E-value=1.1e+02 Score=26.89 Aligned_cols=33 Identities=9% Similarity=0.011 Sum_probs=24.9
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeC
Q 011531 8 PHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNT 43 (483)
Q Consensus 8 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~ 43 (483)
-|.++++.++.| =-.++|++|+++|++|+++..
T Consensus 8 gk~~lVTGas~g---IG~a~a~~l~~~G~~V~~~~r 40 (255)
T 4eso_A 8 GKKAIVIGGTHG---MGLATVRRLVEGGAEVLLTGR 40 (255)
T ss_dssp TCEEEEETCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 356677766643 346899999999999998765
No 356
>1wlq_A Geminin; coiled-coil; 2.80A {Mus musculus} PDB: 2zxx_A*
Probab=20.81 E-value=2.3e+02 Score=20.12 Aligned_cols=45 Identities=16% Similarity=0.278 Sum_probs=23.4
Q ss_pred HHHHHHHHh-HhHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHhh
Q 011531 430 EKLVRDLME-NKREEIMGSTDRVATMARDAVNEGGSSYRNLDGLIEDIRLMA 480 (483)
Q Consensus 430 ~~~i~~ll~-~~~~~~~~~a~~l~~~~~~~~~~gg~~~~~~~~l~~~l~~~~ 480 (483)
+.++.+.|+ | ..+.+......+.+... ......+++|.++.++++
T Consensus 30 r~AL~eaL~EN--~~Lh~~ie~~~eEi~~L----k~en~~L~elA~~~q~la 75 (83)
T 1wlq_A 30 RKALYEALKEN--EKLHKEIEQKDSEIARL----RKENKDLAEVAEHVQYMA 75 (83)
T ss_dssp HHHHHHHHHHH--HHHHHHHHHHHHHHHHH----HHHHHHTHHHHHHHHHHH
T ss_pred HHHHHHHHHHH--HHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHH
Confidence 455556665 4 55666666555555443 122334555555555544
No 357
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=20.72 E-value=1e+02 Score=27.26 Aligned_cols=32 Identities=13% Similarity=0.162 Sum_probs=25.4
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeC
Q 011531 9 HVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNT 43 (483)
Q Consensus 9 ~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~ 43 (483)
|.++++.++.| =-.++|+.|+++|++|+++.-
T Consensus 21 k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r 52 (266)
T 4egf_A 21 KRALITGATKG---IGADIARAFAAAGARLVLSGR 52 (266)
T ss_dssp CEEEETTTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 67788877654 346889999999999988775
No 358
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Probab=20.61 E-value=1.3e+02 Score=25.89 Aligned_cols=37 Identities=8% Similarity=0.087 Sum_probs=26.9
Q ss_pred CEEEEEcCCCCCC--HHHHHHHHHHHHhCCcEEEEEeCC
Q 011531 8 PHVVLLPYPLQGH--IKPMMSLAELLGSANFQVTFVNTD 44 (483)
Q Consensus 8 ~~il~~~~~~~GH--~~p~l~La~~L~~rGH~V~~~~~~ 44 (483)
..++++..|..|+ ...+..+++.|.++|+.|..+-.+
T Consensus 46 ~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 84 (270)
T 3pfb_A 46 YDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFN 84 (270)
T ss_dssp EEEEEEECCTTCCTTCHHHHHHHHHHHHTTCEEEEECCT
T ss_pred CCEEEEEcCCCCCccccHHHHHHHHHHhCCcEEEEEccc
Confidence 3445555555555 666889999999999999877654
No 359
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=20.59 E-value=76 Score=27.98 Aligned_cols=35 Identities=14% Similarity=0.068 Sum_probs=24.8
Q ss_pred CEEEEEcCCCC-CCHHHHHHHHHHHHhCCcEEEEEeCC
Q 011531 8 PHVVLLPYPLQ-GHIKPMMSLAELLGSANFQVTFVNTD 44 (483)
Q Consensus 8 ~~il~~~~~~~-GH~~p~l~La~~L~~rGH~V~~~~~~ 44 (483)
-|.++++.++. |-+ -.++++.|+++|++|+++...
T Consensus 8 ~k~vlVTGas~~~gI--G~~ia~~l~~~G~~V~~~~r~ 43 (261)
T 2wyu_A 8 GKKALVMGVTNQRSL--GFAIAAKLKEAGAEVALSYQA 43 (261)
T ss_dssp TCEEEEESCCSSSSH--HHHHHHHHHHHTCEEEEEESC
T ss_pred CCEEEEECCCCCCcH--HHHHHHHHHHCCCEEEEEcCC
Confidence 35566666652 333 357899999999999988754
No 360
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=20.59 E-value=84 Score=30.43 Aligned_cols=31 Identities=16% Similarity=0.152 Sum_probs=24.5
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeC
Q 011531 8 PHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNT 43 (483)
Q Consensus 8 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~ 43 (483)
|||.++..|..| ..+|..|+++||+|+++..
T Consensus 1 mkI~VIG~G~vG-----~~~A~~la~~G~~V~~~d~ 31 (436)
T 1mv8_A 1 MRISIFGLGYVG-----AVCAGCLSARGHEVIGVDV 31 (436)
T ss_dssp CEEEEECCSTTH-----HHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECCCHHH-----HHHHHHHHHCCCEEEEEEC
Confidence 578888666555 5788999999999998765
No 361
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=20.59 E-value=95 Score=26.22 Aligned_cols=38 Identities=16% Similarity=0.141 Sum_probs=28.2
Q ss_pred CEEEEEcCCCC---CCHHHHHHHHHHHHhCCcEEEEEeCCC
Q 011531 8 PHVVLLPYPLQ---GHIKPMMSLAELLGSANFQVTFVNTDH 45 (483)
Q Consensus 8 ~~il~~~~~~~---GH~~p~l~La~~L~~rGH~V~~~~~~~ 45 (483)
.+|+++|.-+. =-.++...|++.|.++|.+|.|.-+|-
T Consensus 46 ~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 86 (207)
T 1djl_A 46 NSIIITPGYGLCAAKAQYPIADLVKMLTEQGKKVRFGIHPV 86 (207)
T ss_dssp SEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CeEEEECCchHHHHHHhHHHHHHHHHHHHCCCeEEEEeCcc
Confidence 46666665211 235678999999999999999999863
No 362
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=20.57 E-value=92 Score=27.17 Aligned_cols=33 Identities=18% Similarity=0.168 Sum_probs=23.7
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCC
Q 011531 9 HVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTD 44 (483)
Q Consensus 9 ~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~ 44 (483)
|.++++.++.| =-..++++|+++|++|+++...
T Consensus 14 k~vlItGasgg---iG~~la~~l~~~G~~V~~~~r~ 46 (260)
T 3awd_A 14 RVAIVTGGAQN---IGLACVTALAEAGARVIIADLD 46 (260)
T ss_dssp CEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCCch---HHHHHHHHHHHCCCEEEEEeCC
Confidence 45556655432 3467999999999999988753
No 363
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=20.55 E-value=61 Score=31.97 Aligned_cols=34 Identities=12% Similarity=0.169 Sum_probs=27.3
Q ss_pred CCCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeC
Q 011531 5 HVNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNT 43 (483)
Q Consensus 5 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~ 43 (483)
+..|||.++..|..| +.+|..|+++||+|+++..
T Consensus 6 ~~~~~I~VIG~G~vG-----~~lA~~la~~G~~V~~~d~ 39 (478)
T 2y0c_A 6 HGSMNLTIIGSGSVG-----LVTGACLADIGHDVFCLDV 39 (478)
T ss_dssp -CCCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCceEEEECcCHHH-----HHHHHHHHhCCCEEEEEEC
Confidence 456999999776544 6789999999999998865
No 364
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=20.53 E-value=1.1e+02 Score=26.39 Aligned_cols=32 Identities=22% Similarity=0.183 Sum_probs=22.2
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeC
Q 011531 9 HVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNT 43 (483)
Q Consensus 9 ~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~ 43 (483)
|.++++.++ |- =-..++++|+++||+|+++.-
T Consensus 2 k~vlVtGas-g~--iG~~l~~~L~~~g~~V~~~~r 33 (255)
T 2dkn_A 2 SVIAITGSA-SG--IGAALKELLARAGHTVIGIDR 33 (255)
T ss_dssp CEEEEETTT-SH--HHHHHHHHHHHTTCEEEEEES
T ss_pred cEEEEeCCC-cH--HHHHHHHHHHhCCCEEEEEeC
Confidence 345555444 32 345789999999999998865
No 365
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=20.52 E-value=4.8e+02 Score=23.63 Aligned_cols=32 Identities=19% Similarity=0.129 Sum_probs=22.3
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCC
Q 011531 8 PHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTD 44 (483)
Q Consensus 8 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~ 44 (483)
|||+|+..+. ......+.|.++||+|..+.+.
T Consensus 1 mrivf~gt~~-----fa~~~L~~L~~~~~~i~~Vvt~ 32 (305)
T 2bln_A 1 MKTVVFAYHD-----MGCLGIEALLAAGYEISAIFTH 32 (305)
T ss_dssp CEEEEEECHH-----HHHHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEEEcCH-----HHHHHHHHHHHCCCcEEEEEcC
Confidence 6888886532 2245567788889999877764
No 366
>1kd8_B GABH BLL, GCN4 acid base heterodimer base-D12LA16L; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kd9_B 1kdd_B
Probab=20.51 E-value=1.4e+02 Score=17.38 Aligned_cols=29 Identities=10% Similarity=0.121 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHh-HhHHHHHHHHHHHHHHHHH
Q 011531 427 SIIEKLVRDLME-NKREEIMGSTDRVATMARD 457 (483)
Q Consensus 427 ~~l~~~i~~ll~-~~~~~~~~~a~~l~~~~~~ 457 (483)
.+|.+.|.+++. + ..+...+.+++..+..
T Consensus 4 nQLE~KVEeLl~~~--~~Le~eV~RLk~ll~~ 33 (36)
T 1kd8_B 4 KQLKAKVEELKSKL--WHLKNKVARLKKKNAE 33 (36)
T ss_dssp HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHh--HHHHHHHHHHHHHhcc
Confidence 578888999988 4 7788889999888855
No 367
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=20.49 E-value=47 Score=30.61 Aligned_cols=31 Identities=23% Similarity=0.095 Sum_probs=24.5
Q ss_pred CEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeC
Q 011531 8 PHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNT 43 (483)
Q Consensus 8 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~ 43 (483)
|||+|+..|..| ..+|..|+++||+|+++..
T Consensus 1 m~I~iiG~G~mG-----~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 1 MIVSILGAGAMG-----SALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp CEEEEESCCHHH-----HHHHHHHHHHCCEEEEECC
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCeEEEEEc
Confidence 578888766544 4678999999999998876
No 368
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=20.47 E-value=1.7e+02 Score=25.58 Aligned_cols=32 Identities=28% Similarity=0.203 Sum_probs=22.8
Q ss_pred EEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeC
Q 011531 9 HVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNT 43 (483)
Q Consensus 9 ~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~ 43 (483)
|.++++.++.| =-..+++.|+++||+|+++.-
T Consensus 8 k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r 39 (267)
T 2gdz_A 8 KVALVTGAAQG---IGRAFAEALLLKGAKVALVDW 39 (267)
T ss_dssp CEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCc---HHHHHHHHHHHCCCEEEEEEC
Confidence 44555555432 246789999999999998765
No 369
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=20.43 E-value=1.3e+02 Score=22.67 Aligned_cols=48 Identities=8% Similarity=0.117 Sum_probs=35.2
Q ss_pred hCCceeccccccchhHHHHHHHHhhccceecCCCCCHHHHHHHHHHHHhH
Q 011531 390 AGVPMICWPQFSDQLVNSRCVSEVWKIGFDMKDTCDGSIIEKLVRDLMEN 439 (483)
Q Consensus 390 ~GvP~l~~P~~~DQ~~na~~v~~~~G~G~~l~~~~~~~~l~~~i~~ll~~ 439 (483)
..+|+|++--..+........ + .|+--.+.+.++.+.|.++|+++++.
T Consensus 84 ~~~pii~ls~~~~~~~~~~~~-~-~g~~~~l~kP~~~~~l~~~i~~~~~~ 131 (140)
T 1k68_A 84 KRIPVVVLSTSINEDDIFHSY-D-LHVNCYITKSANLSQLFQIVKGIEEF 131 (140)
T ss_dssp GGSCEEEEESCCCHHHHHHHH-H-TTCSEEEECCSSHHHHHHHHHHHHHH
T ss_pred ccccEEEEecCCcHHHHHHHH-H-hchhheecCCCCHHHHHHHHHHHHHH
Confidence 467888877666654444444 4 67766676889999999999999874
No 370
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=20.41 E-value=60 Score=31.51 Aligned_cols=36 Identities=17% Similarity=0.159 Sum_probs=25.2
Q ss_pred CCCCCCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCC
Q 011531 3 RSHVNPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTD 44 (483)
Q Consensus 3 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~ 44 (483)
.+...|||.++..|..| +.+|..|++ ||+|+++...
T Consensus 32 r~~~~mkIaVIGlG~mG-----~~lA~~La~-G~~V~~~D~~ 67 (432)
T 3pid_A 32 RGSEFMKITISGTGYVG-----LSNGVLIAQ-NHEVVALDIV 67 (432)
T ss_dssp ---CCCEEEEECCSHHH-----HHHHHHHHT-TSEEEEECSC
T ss_pred cccCCCEEEEECcCHHH-----HHHHHHHHc-CCeEEEEecC
Confidence 34455899998776544 567888888 9999988653
No 371
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=20.31 E-value=46 Score=30.49 Aligned_cols=40 Identities=15% Similarity=0.064 Sum_probs=29.6
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhCCcEEEEEeCCCc-hhhhhh
Q 011531 7 NPHVVLLPYPLQGHIKPMMSLAELLGSANFQVTFVNTDHN-HDLLLR 52 (483)
Q Consensus 7 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~V~~~~~~~~-~~~~~~ 52 (483)
+|||+|+..|+.|- .+|..|+ +||+|+++..... .+.+.+
T Consensus 2 ~mkI~IiGaGa~G~-----~~a~~L~-~g~~V~~~~r~~~~~~~l~~ 42 (307)
T 3ego_A 2 SLKIGIIGGGSVGL-----LCAYYLS-LYHDVTVVTRRQEQAAAIQS 42 (307)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHH-TTSEEEEECSCHHHHHHHHH
T ss_pred CCEEEEECCCHHHH-----HHHHHHh-cCCceEEEECCHHHHHHHHh
Confidence 48999998887764 6788899 9999999987542 334443
No 372
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=20.28 E-value=1.7e+02 Score=27.07 Aligned_cols=27 Identities=15% Similarity=0.120 Sum_probs=22.8
Q ss_pred cceeeccCchhHHHHHH------hCCceecccc
Q 011531 373 GGFLTHGGWNSTLEGIA------AGVPMICWPQ 399 (483)
Q Consensus 373 ~~~ItHgG~gs~~eal~------~GvP~l~~P~ 399 (483)
+++|.-||=||+.|++. .++|+.++|.
T Consensus 82 d~vvv~GGDGTv~~v~~~l~~~~~~~pl~iIP~ 114 (337)
T 2qv7_A 82 DVLIAAGGDGTLNEVVNGIAEKPNRPKLGVIPM 114 (337)
T ss_dssp SEEEEEECHHHHHHHHHHHTTCSSCCEEEEEEC
T ss_pred CEEEEEcCchHHHHHHHHHHhCCCCCcEEEecC
Confidence 44999999999999864 4689999997
No 373
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=20.17 E-value=54 Score=27.09 Aligned_cols=34 Identities=9% Similarity=-0.049 Sum_probs=25.6
Q ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHHhC-CcEEEEEeCCC
Q 011531 7 NPHVVLLPYPLQGHIKPMMSLAELLGSA-NFQVTFVNTDH 45 (483)
Q Consensus 7 ~~~il~~~~~~~GH~~p~l~La~~L~~r-GH~V~~~~~~~ 45 (483)
+.||+++..|.. -..+++.|.++ ||+|+++....
T Consensus 39 ~~~v~IiG~G~~-----G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRI-----GTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHH-----HHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCcEEEECCCHH-----HHHHHHHHHhccCCeEEEEECCH
Confidence 568888865433 35678999999 99999887643
No 374
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=20.09 E-value=52 Score=28.41 Aligned_cols=19 Identities=32% Similarity=0.352 Sum_probs=16.8
Q ss_pred HHHHHHHHHhCCcEEEEEe
Q 011531 24 MMSLAELLGSANFQVTFVN 42 (483)
Q Consensus 24 ~l~La~~L~~rGH~V~~~~ 42 (483)
-+.+|..|+++|++|+++=
T Consensus 14 GL~aA~~La~~G~~V~v~E 32 (336)
T 3kkj_A 14 GLSAAQALTAAGHQVHLFD 32 (336)
T ss_dssp HHHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHHCCCCEEEEE
Confidence 3789999999999999874
Done!