BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011532
(483 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3EM5|A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev
B 2), A Major Allergen From Hevea Brasiliensis
pdb|3EM5|B Chain B, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev
B 2), A Major Allergen From Hevea Brasiliensis
pdb|3EM5|C Chain C, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev
B 2), A Major Allergen From Hevea Brasiliensis
pdb|3EM5|D Chain D, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev
B 2), A Major Allergen From Hevea Brasiliensis
pdb|3F55|A Chain A, Crystal Structure Of The Native Endo Beta-1,3-Glucanase
(Hev B 2), A Major Allergen From Hevea Brasiliensis
(Space Group P41)
pdb|3F55|B Chain B, Crystal Structure Of The Native Endo Beta-1,3-Glucanase
(Hev B 2), A Major Allergen From Hevea Brasiliensis
(Space Group P41)
pdb|3F55|C Chain C, Crystal Structure Of The Native Endo Beta-1,3-Glucanase
(Hev B 2), A Major Allergen From Hevea Brasiliensis
(Space Group P41)
pdb|3F55|D Chain D, Crystal Structure Of The Native Endo Beta-1,3-Glucanase
(Hev B 2), A Major Allergen From Hevea Brasiliensis
(Space Group P41)
Length = 316
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/330 (33%), Positives = 177/330 (53%), Gaps = 22/330 (6%)
Query: 23 LGVNWGTQTTHQLPPKTIVQMLKDNGISKVKLFDAHQGTMIALAGSDIEVMVAIPNKDLL 82
+GV +G Q + P ++ + K + I++++++D +Q + AL GS+IE+++ +PN DL
Sbjct: 2 VGVCYGMQGNNLPPVSEVIALYKKSNITRMRIYDPNQAVLEALRGSNIELILGVPNSDLQ 61
Query: 83 DMNSYDRAKQWVKRNVTRYNFKGGVSIKYVAVGNE--PFLK--AYNGSFLNTTFPALQNI 138
+ + AK WV++NV F V +Y+AVGNE P + A+ F+ PA++NI
Sbjct: 62 SLTNPSNAKSWVQKNVR--GFWSSVRFRYIAVGNEISPVNRGTAWLAQFV---LPAMRNI 116
Query: 139 QNALNEAGVGDSIKATVPLNADVYESPENNPY-PSFGRFRTDILGQMTQIVEFLAKNNAP 197
+A+ AG+ D IK + ++ + N Y PS G FR D+ + I+ FL+ +P
Sbjct: 117 HDAIRSAGLQDQIKVSTAIDLTLV----GNSYPPSAGAFRDDVRSYLNPIIRFLSSIRSP 172
Query: 198 FTVNIYPFLSLYGN-DDFPFNYAFFDGGTPIVDSGTGIQYTNVFDANFDTLVSALKAVGH 256
NIYP+ + GN D YA F + +V G Y N+FDA D L SAL+
Sbjct: 173 LLANIYPYFTYAGNPRDISLPYALFTSPSVVVWDGQR-GYKNLFDATLDALYSALERASG 231
Query: 257 GDMPMIVGEVGWPTDGDKNANNGNAYRFYNGLLPKLAANKGTPLRPGY-IEVYLFGLVDE 315
G + ++V E GWP+ G A N + + L+ + +GTP RP IE YLF + DE
Sbjct: 232 GSLEVVVSESGWPSAGAFAATFDNGRTYLSNLIQHV--KRGTPKRPKRAIETYLFAMFDE 289
Query: 316 DAKSIDPGYFERHWGIFRYDGQPKFAMDLS 345
+ K + E+H+G+F + K+ ++ S
Sbjct: 290 NKKQPE---VEKHFGLFFPNKWQKYNLNFS 316
>pdb|3UR7|A Chain A, Higher-density Crystal Structure Of Potato
Endo-1,3-beta-glucanase
pdb|3UR7|B Chain B, Higher-density Crystal Structure Of Potato
Endo-1,3-beta-glucanase
pdb|3UR8|A Chain A, Lower-density Crystal Structure Of Potato
Endo-1,3-beta-glucanase
pdb|3UR8|B Chain B, Lower-density Crystal Structure Of Potato
Endo-1,3-beta-glucanase
Length = 323
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 105/326 (32%), Positives = 171/326 (52%), Gaps = 16/326 (4%)
Query: 23 LGVNWGTQTTHQLPPKTIVQMLKDNGISKVKLFDAHQGTMIALAGSDIEVMVAIPNKDLL 82
+GV +G + + ++++ N I K++++ H AL GS+IE+++ +PN+DL
Sbjct: 3 IGVCYGKIANNLPSDQDVIKLYNANNIKKMRIYYPHTNVFNALKGSNIEIILDVPNQDLE 62
Query: 83 DMNSYDRAKQWVKRNVTRYNFKGGVSIKYVAVGNEPFLKAYNGSFLNTTFPALQNIQNAL 142
+ + A WV+ N+ N V KY+AVGNE +G + PA++NI NAL
Sbjct: 63 ALANPSNANGWVQDNIR--NHFPDVKFKYIAVGNEVDPGRESGKYARFVGPAMENIYNAL 120
Query: 143 NEAGVGDSIKATVPLNADVYESPENNPYPSFGR-FRTDILGQMTQIVEFLAKNNAPFTVN 201
+ AG+ + IK + Y N YP FR + + I+ FLA++N P N
Sbjct: 121 SSAGLQNQIKVST----STYSGLLTNTYPPRDSIFREEYKSFINPIIGFLARHNLPLLAN 176
Query: 202 IYPFLSLYGNDD-FPFNYAFFDGGTPIVDSGTGIQYTNVFDANFDTLVSALKAVGHGDMP 260
IYP+ N + P +YA F+ + TG Y N+FDA D++ A + +G ++
Sbjct: 177 IYPYFGHIDNTNAVPLSYALFNQQR---RNDTG--YQNLFDALVDSMYFATEKLGGQNIE 231
Query: 261 MIVGEVGWPTDGDKNANNGNAYRFYNGLLPKLAANKGTPLRPGY-IEVYLFGLVDEDAKS 319
+IV E GWP++G A NA +Y L+ + GTP +PG IE YLF + DE+ K
Sbjct: 232 IIVSESGWPSEGHPAATLKNARTYYTNLINHVKRGAGTPKKPGKTIETYLFAMFDENEKK 291
Query: 320 IDPGYFERHWGIFRYDGQPKFAMDLS 345
+ E+H+G+F D +PK+ ++ +
Sbjct: 292 GEAS--EKHFGLFNPDQRPKYQLNFN 315
>pdb|4GZI|A Chain A, Active-site Mutant Of Potato Endo-1,3-beta-glucanase In
Complex With Laminaratriose
pdb|4GZJ|A Chain A, Active-site Mutant Of Potato Endo-1,3-beta-glucanase In
Complex With Laminaratriose And Laminaratetrose
Length = 323
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 104/326 (31%), Positives = 170/326 (52%), Gaps = 16/326 (4%)
Query: 23 LGVNWGTQTTHQLPPKTIVQMLKDNGISKVKLFDAHQGTMIALAGSDIEVMVAIPNKDLL 82
+GV +G + + ++++ N I K++++ H AL GS+IE+++ +PN+DL
Sbjct: 3 IGVCYGKIANNLPSDQDVIKLYNANNIKKMRIYYPHTNVFNALKGSNIEIILDVPNQDLE 62
Query: 83 DMNSYDRAKQWVKRNVTRYNFKGGVSIKYVAVGNEPFLKAYNGSFLNTTFPALQNIQNAL 142
+ + A WV+ N+ N V KY+AVGNE +G + PA++NI NAL
Sbjct: 63 ALANPSNANGWVQDNIR--NHFPDVKFKYIAVGNEVDPGRESGKYARFVGPAMENIYNAL 120
Query: 143 NEAGVGDSIKATVPLNADVYESPENNPYPSFGR-FRTDILGQMTQIVEFLAKNNAPFTVN 201
+ AG+ + IK + Y N YP FR + + I+ FLA++N P N
Sbjct: 121 SSAGLQNQIKVST----STYSGLLTNTYPPRDSIFREEYKSFINPIIGFLARHNLPLLAN 176
Query: 202 IYPFLSLYGNDD-FPFNYAFFDGGTPIVDSGTGIQYTNVFDANFDTLVSALKAVGHGDMP 260
IYP+ N + P +YA F+ + TG Y N+FDA D++ A + +G ++
Sbjct: 177 IYPYFGHIDNTNAVPLSYALFNQQR---RNDTG--YQNLFDALVDSMYFATEKLGGQNIE 231
Query: 261 MIVGEVGWPTDGDKNANNGNAYRFYNGLLPKLAANKGTPLRPGY-IEVYLFGLVDEDAKS 319
+IV GWP++G A NA +Y L+ + GTP +PG IE YLF + DE+ K
Sbjct: 232 IIVSASGWPSEGHPAATLKNARTYYTNLINHVKRGAGTPKKPGKTIETYLFAMFDENEKK 291
Query: 320 IDPGYFERHWGIFRYDGQPKFAMDLS 345
+ E+H+G+F D +PK+ ++ +
Sbjct: 292 GEAS--EKHFGLFNPDQRPKYQLNFN 315
>pdb|2CYG|A Chain A, Crystal Structure At 1.45- Resolution Of The Major
Allergen Endo-Beta-1,3-Glucanase Of Banana As A
Molecular Basis For The Latex-Fruit Syndrome
Length = 312
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 175/326 (53%), Gaps = 18/326 (5%)
Query: 23 LGVNWGTQTTHQLPPKTIVQMLKDNGISKVKLFDAHQGTMIALAGSDIEVMVAIPNKDLL 82
+GV +G + PP +V + K N I++++L+D +Q + AL S+I+V++ +P D+
Sbjct: 1 IGVCYGMLGNNLPPPSEVVSLYKSNNIARMRLYDPNQAALQALRNSNIQVLLDVPRSDVQ 60
Query: 83 DMNSYDRAK-QWVKRNVTRYNFKGGVSIKYVAVGNEPFLKAYNGSFLNTTFPALQNIQNA 141
+ S A W++RNV Y VS +Y+AVGNE + ++ PA++NI NA
Sbjct: 61 SLASNPSAAGDWIRRNVVAY--WPSVSFRYIAVGNELIPGSDLAQYI---LPAMRNIYNA 115
Query: 142 LNEAGVGDSIKATVPLNADVYESPENNPYPSFGRFRTDILGQMTQIVEFLAKNNAPFTVN 201
L+ AG+ + IK + ++ V + PS G F + ++ IV+FLA N AP VN
Sbjct: 116 LSSAGLQNQIKVSTAVDTGVLGTSYP---PSAGAFSSAAQAYLSPIVQFLASNGAPLLVN 172
Query: 202 IYPFLSLYGND-DFPFNYAFFDGGTPIVDSGTGIQYTNVFDANFDTLVSALKAVGHGDMP 260
+YP+ S GN YA F +V G Y N+FDA D + +AL+ VG ++
Sbjct: 173 VYPYFSYTGNPGQISLPYALFTASGVVVQDGR-FSYQNLFDAIVDAVFAALERVGGANVA 231
Query: 261 MIVGEVGWPT-DGDKNANNGNAYRFYNGLLPKLAANKGTPLRPG-YIEVYLFGLVDEDAK 318
++V E GWP+ G A+ NA + L+ + GTP RPG IE Y+F + +E+ K
Sbjct: 232 VVVSESGWPSAGGGAEASTSNAQTYNQNLIRHVGG--GTPRRPGKEIEAYIFEMFNENQK 289
Query: 319 SIDPGYFERHWGIFRYDGQPKFAMDL 344
+ G E+++G+F + QP + +
Sbjct: 290 A---GGIEQNFGLFYPNKQPVYQISF 312
>pdb|1AQ0|A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group
pdb|1AQ0|B Chain B, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group
pdb|1GHR|A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan
Endohydrolases With Distinct Substrate Specificities
Length = 306
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 113/327 (34%), Positives = 163/327 (49%), Gaps = 26/327 (7%)
Query: 23 LGVNWGTQTTHQLPPKTIVQMLKDNGISKVKLFDAHQGTMIALAGSDIEVMVAIPNKDLL 82
+GV +G + T+V M K NGI ++L+ +Q + A+ G+ I V+V PN L
Sbjct: 1 IGVCYGMSANNLPAASTVVSMFKSNGIKSMRLYAPNQAALQAVGGTGINVVVGAPNDVLS 60
Query: 83 DM-NSYDRAKQWVKRNVTRYNFKGGVSIKYVAVGNEPFLKAYNGSFLNTTFPALQNIQNA 141
++ S A WVK N+ Y VS +YV VGNE G PA++N+ A
Sbjct: 61 NLAASPAAAASWVKSNIQAYP---KVSFRYVCVGNE-----VAGGATRNLVPAMKNVHGA 112
Query: 142 LNEAGVGDSIKATVPLNADVYE--SPENNPYPSFGRFRTDILGQMTQIVEFLAKNNAPFT 199
L AG+G IK T ++ + SP PS G F + M +V+FLA+ NAP
Sbjct: 113 LVAAGLGH-IKVTTSVSQAILGVFSP-----PSAGSFTGEAAAFMGPVVQFLARTNAPLM 166
Query: 200 VNIYPFLS-LYGNDDFPFNYAFFDG-GTPIVDSGTGIQYTNVFDANFDTLVSALKAVGHG 257
NIYP+L+ Y YA F+ GT + D G Y N+FD D +A+ G
Sbjct: 167 ANIYPYLAWAYNPSAMDMGYALFNASGTVVRDGAYG--YQNLFDTTVDAFYTAMGKHGGS 224
Query: 258 DMPMIVGEVGWPTDGDKNANNGNAYRFYNGLLPKLAANKGTPLRPGYIEVYLFGLVDEDA 317
+ ++V E GWP+ G A NA RFYN L +GTP PG IE Y+F + +E+
Sbjct: 225 SVKLVVSESGWPSGGGTAATPANA-RFYNQHLIN-HVGRGTPRHPGAIETYIFAMFNENQ 282
Query: 318 KSIDPGYFERHWGIFRYDGQPKFAMDL 344
K D G E++WG+F + Q + ++
Sbjct: 283 K--DSG-VEQNWGLFYPNMQHVYPINF 306
>pdb|1GHS|A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan
Endohydrolases With Distinct Substrate Specificities
pdb|1GHS|B Chain B, The Three-Dimensional Structures Of Two Plant Beta-Glucan
Endohydrolases With Distinct Substrate Specificities
Length = 306
Score = 135 bits (339), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 162/321 (50%), Gaps = 22/321 (6%)
Query: 23 LGVNWGTQTTHQLPPKT-IVQMLKDNGISKVKLFDAHQGTMIALAGSDIEVMVAIPNKDL 81
+GV +G + LP ++ +VQ+ + GI+ ++++ A + AL S I +++ I N L
Sbjct: 1 IGVCYGV-IGNNLPSRSDVVQLYRSKGINGMRIYFADGQALSALRNSGIGLILDIGNDQL 59
Query: 82 LDMN-SYDRAKQWVKRNVTRYNFKGGVSIKYVAVGNEPFLKAYNGSFLNTTFPALQNIQN 140
++ S A WV+ NV Y V+IKY+A GNE G + PA++N+ N
Sbjct: 60 ANIAASTSNAASWVQNNVRPY--YPAVNIKYIAAGNE-----VQGGATQSILPAMRNL-N 111
Query: 141 ALNEAGVGDSIKATVPLNADVYESPENNPYPSFGRFRTDILGQMTQIVEFLAKNNAPFTV 200
A A +IK + + ++ N+ PS G F+ MT + LA AP
Sbjct: 112 AALSAAGLGAIKVSTSIR---FDEVANSFPPSAGVFKN---AYMTDVARLLASTGAPLLA 165
Query: 201 NIYPFLSLYGN-DDFPFNYAFFDGGTPIVDSGTGIQYTNVFDANFDTLVSALKAVGHGDM 259
N+YP+ + N NYA F GT + D G+ YT++FDA D + +AL+ G +
Sbjct: 166 NVYPYFAYRDNPGSISLNYATFQPGTTVRDQNNGLTYTSLFDAMVDAVYAALEKAGAPAV 225
Query: 260 PMIVGEVGWPTDGDKNANNGNAYRFYNGLLPKLAANKGTPLRPGYIEVYLFGLVDEDAKS 319
++V E GWP+ G A+ GNA + GL+ + GTP + +E Y+F + +E+ K+
Sbjct: 226 KVVVSESGWPSAGGFAASAGNARTYNQGLINHVGG--GTPKKREALETYIFAMFNENQKT 283
Query: 320 IDPGYFERHWGIFRYDGQPKF 340
D ER +G+F D P +
Sbjct: 284 GDA--TERSFGLFNPDKSPAY 302
>pdb|2JON|A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9
Length = 101
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
Query: 366 WCMLNPDAKDMSKLVDNIKYACTWS-DCTALGYGSSC---NNLDANGNASYAFNMYYQIK 421
WC+ P D +L NI YAC+ DC + G +C N + A+ A+Y N+YYQ
Sbjct: 13 WCVPKPGVSD-DQLTGNINYACSQGIDCGPIQPGGACFEPNTVKAH--AAYVMNLYYQHA 69
Query: 422 NQDELACGFQGLGKVTTQNLSQGQCSF 448
++ C F +T N S G C+F
Sbjct: 70 GRNSWNCDFSQTATLTNTNPSYGACNF 96
>pdb|2GRE|A Chain A, Crystal Structure Of Deblocking Aminopeptidase From
Bacillus Cereus
pdb|2GRE|B Chain B, Crystal Structure Of Deblocking Aminopeptidase From
Bacillus Cereus
pdb|2GRE|C Chain C, Crystal Structure Of Deblocking Aminopeptidase From
Bacillus Cereus
pdb|2GRE|D Chain D, Crystal Structure Of Deblocking Aminopeptidase From
Bacillus Cereus
pdb|2GRE|E Chain E, Crystal Structure Of Deblocking Aminopeptidase From
Bacillus Cereus
pdb|2GRE|F Chain F, Crystal Structure Of Deblocking Aminopeptidase From
Bacillus Cereus
pdb|2GRE|G Chain G, Crystal Structure Of Deblocking Aminopeptidase From
Bacillus Cereus
pdb|2GRE|H Chain H, Crystal Structure Of Deblocking Aminopeptidase From
Bacillus Cereus
pdb|2GRE|I Chain I, Crystal Structure Of Deblocking Aminopeptidase From
Bacillus Cereus
pdb|2GRE|J Chain J, Crystal Structure Of Deblocking Aminopeptidase From
Bacillus Cereus
pdb|2GRE|K Chain K, Crystal Structure Of Deblocking Aminopeptidase From
Bacillus Cereus
pdb|2GRE|L Chain L, Crystal Structure Of Deblocking Aminopeptidase From
Bacillus Cereus
pdb|2GRE|M Chain M, Crystal Structure Of Deblocking Aminopeptidase From
Bacillus Cereus
pdb|2GRE|N Chain N, Crystal Structure Of Deblocking Aminopeptidase From
Bacillus Cereus
pdb|2GRE|O Chain O, Crystal Structure Of Deblocking Aminopeptidase From
Bacillus Cereus
pdb|2GRE|P Chain P, Crystal Structure Of Deblocking Aminopeptidase From
Bacillus Cereus
Length = 349
Score = 32.0 bits (71), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 186 QIVEFLAKNNAPFTVNIYPFLSLYGNDDFPFNYAFFDGGTPIVDSGTGIQYTNVFDANFD 245
+VE N+ + V+IYP+ YG+D A FD ++ G GI ++ F+ +
Sbjct: 274 HLVELAKTNHIEYKVDIYPY---YGSDASAAIRAGFDVKHALI--GAGIDSSHAFERTHE 328
Query: 246 TLVSALKAV 254
+ ++ +A+
Sbjct: 329 SSIAHTEAL 337
>pdb|1VA4|A Chain A, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|B Chain B, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|C Chain C, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|D Chain D, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|E Chain E, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|F Chain F, Pseudomonas Fluorescens Aryl Esterase
Length = 279
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Query: 153 ATVPLNADVYESPENNPYPSFGRFRTDILGQMTQIVEFLAKNNAPF 198
A PL + P+ P F RF+T++L Q F++ NAPF
Sbjct: 120 AVTPLFGQKPDYPQGVPLDVFARFKTELLKDRAQ---FISDFNAPF 162
>pdb|3T4U|A Chain A, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|B Chain B, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|C Chain C, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|D Chain D, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|E Chain E, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|F Chain F, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|A Chain A, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|B Chain B, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|C Chain C, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|D Chain D, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|E Chain E, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|F Chain F, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
Length = 271
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Query: 153 ATVPLNADVYESPENNPYPSFGRFRTDILGQMTQIVEFLAKNNAPF 198
A PL + P+ P F RF+T++L Q F++ NAPF
Sbjct: 120 AVTPLFGQKPDYPQGVPLDVFARFKTELLKDRAQ---FISDFNAPF 162
>pdb|3IA2|A Chain A, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|B Chain B, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|C Chain C, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|D Chain D, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|E Chain E, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|F Chain F, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
Length = 271
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Query: 153 ATVPLNADVYESPENNPYPSFGRFRTDILGQMTQIVEFLAKNNAPF 198
A PL + P+ P F RF+T++L Q F++ NAPF
Sbjct: 120 AVTPLFGQKPDYPQGVPLDVFARFKTELLKDRAQ---FISDFNAPF 162
>pdb|3HI4|A Chain A, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|B Chain B, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|C Chain C, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|D Chain D, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|E Chain E, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|F Chain F, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
Length = 271
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Query: 153 ATVPLNADVYESPENNPYPSFGRFRTDILGQMTQIVEFLAKNNAPF 198
A PL + P+ P F RF+T++L Q F++ NAPF
Sbjct: 120 AVTPLFGQKPDYPQGVPLDVFARFKTELLKDRAQ---FISDFNAPF 162
>pdb|3HEA|A Chain A, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|B Chain B, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|C Chain C, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|D Chain D, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|E Chain E, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|F Chain F, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
Length = 271
Score = 29.3 bits (64), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Query: 153 ATVPLNADVYESPENNPYPSFGRFRTDILGQMTQIVEFLAKNNAPF 198
A P+ + P+ P F RF+T++L Q F++ NAPF
Sbjct: 120 AVTPIFGQKPDYPQGVPLDVFARFKTELLKDRAQ---FISDFNAPF 162
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.138 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,164,428
Number of Sequences: 62578
Number of extensions: 715100
Number of successful extensions: 1533
Number of sequences better than 100.0: 28
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 1496
Number of HSP's gapped (non-prelim): 28
length of query: 483
length of database: 14,973,337
effective HSP length: 103
effective length of query: 380
effective length of database: 8,527,803
effective search space: 3240565140
effective search space used: 3240565140
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)